BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043068
(526 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/503 (92%), Positives = 467/503 (92%), Gaps = 36/503 (7%)
Query: 1 MATPRRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTK 60
MATPRRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTK
Sbjct: 1 MATPRRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTK 60
Query: 61 VIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK 120
VIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK
Sbjct: 61 VIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK 120
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF
Sbjct: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGF---- 236
FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGF
Sbjct: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKG 240
Query: 237 --------------------------------CKKGELEEAKKCMNEMMNRGCRPNELTY 264
CKKGELEEAKKCMNEMMNRGCRPNELTY
Sbjct: 241 DMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTY 300
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME
Sbjct: 301 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 360
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR
Sbjct: 361 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 420
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL
Sbjct: 421 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 480
Query: 445 KGYCEEGNVENVMQIAHEMVTKK 467
KGYCEEGNVENVMQIAHEMVTKK
Sbjct: 481 KGYCEEGNVENVMQIAHEMVTKK 503
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 102/197 (51%), Gaps = 4/197 (2%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVF-DVM--TVKPNLLAYNTMINGFCKKGELEEAKKCM 249
+VST+ +M++G C +G + A +VM + P++ +Y +INGFCK G+ +EA +
Sbjct: 331 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 390
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
EM RG +P ++NA+ L NG +D A +L+ +M N ++ +++ GLC+
Sbjct: 391 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 450
Query: 310 -GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G+ + ++ + N D Y ++ G+C+ G + + + EM + + S
Sbjct: 451 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLES 510
Query: 369 FNAVFRILVENGELDRA 385
F+ + + L G++ A
Sbjct: 511 FSVLVKQLCAKGKVTEA 527
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 5/199 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ S+L L V A + +++ N+ PDV +Y +I G+CK+G + A +
Sbjct: 334 THKSMLKGLCVVGKFDQAVGYLRNVMEANM-NPDVKSYEVVINGFCKIGKSDEAISLLKE 392
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI-NG 275
M +KP + ++N + + GEL+ A + +M C PN ++YN +I GLC+ G
Sbjct: 393 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 452
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R+ + + L+ +M +G + + + +LKG C G + + ++ ++S+
Sbjct: 453 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFS 512
Query: 336 VVINGFCKIGKSDEAISLL 354
V++ C GK EA L
Sbjct: 513 VLVKQLCAKGKVTEAEKLF 531
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 292/518 (56%), Positives = 370/518 (71%), Gaps = 44/518 (8%)
Query: 6 RSLTNISQIPDQSILV------TSITSVIQRLNPQNPSPKNISS-QPLDQFSLCLGSNIV 58
R+L N P S + +SITS +Q LNPQNP+P + +S PL QF+ L +V
Sbjct: 58 RTLANTHASPLASHIAQLLSTASSITSFLQTLNPQNPTPNSPTSISPLSQFAPFLNPXLV 117
Query: 59 TKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNS 118
+VI Q NPYHALFFFNWASNPNPNPN Y H+ CY AITD+L+SH L S A+SLL++
Sbjct: 118 IQVIKSQKNPYHALFFFNWASNPNPNPNNYSHSHLCYVAITDLLISHGLFSTASSLLQSH 177
Query: 119 NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAE 178
++LSDF +K +KAYGDRG+++ AI WFH+AK++E+G CL+SYN++LGV V+ N I LA
Sbjct: 178 HRLSDFAAAKFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLAR 237
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCK 238
F QIVKE VV PDVSTYTT+IRGYCKMGMIENAK VFD M KPNL+ YNTMINGFCK
Sbjct: 238 AVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEMGCKPNLVTYNTMINGFCK 297
Query: 239 K------------------------------------GELEEAKKCMNEMMNRGCRPNEL 262
K GELEEA K M EM++R C PN L
Sbjct: 298 KGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVL 357
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
TYNA+IYGLC+NG VDEAK +M +MRLNG KDNV+TH S+LKGLCVVGK D A +L+ +
Sbjct: 358 TYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEM 417
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ M D K+Y VV+N +CKIGK+D+AISLLKEM++RG+ P+V SFNAVFRILVE+G+
Sbjct: 418 VGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKT 477
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
D+A L+L+QM Q+ C PNF+SY+T+I GLC AKGRM +VE+ VD M R+GH+LD +MYS
Sbjct: 478 DKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSW 537
Query: 443 LLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRV 480
L+KGYCE+GN + M++ EM+ G ++ L++FL V
Sbjct: 538 LVKGYCEDGNADMAMRLFCEML-DMGYVINLESFLAFV 574
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 121/273 (44%), Gaps = 40/273 (14%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y RG ++ A+ + + + +YN+++ L ++ A+ ++ +
Sbjct: 325 TTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRM-R 383
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
N + +V+T+T++++G C +G +++A + M ++ + AY ++N +CK G+ +
Sbjct: 384 LNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKAD 443
Query: 244 EAKKCMNEMMNRG-----------------------------------CRPNELTYNAMI 268
+A + EM +RG C PN L+Y+ +I
Sbjct: 444 DAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVI 503
Query: 269 YGLC-INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
GLC GR+ E + + M NG + S + ++KG C G D A+ +++
Sbjct: 504 DGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGY 563
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++S+ + G K+ E +EM R
Sbjct: 564 VINLESFLAFVKGLSAKEKAFEVEKFFEEMSRR 596
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCK-KG 240
+K + P VS++ + R + G + A + M PN L+Y+T+I+G CK KG
Sbjct: 452 MKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKG 511
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ E ++ +++M G + Y+ ++ G C +G D A L +M G+ N+ +
Sbjct: 512 RMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFL 571
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
+ +KGL K + + + D+ Y +++
Sbjct: 572 AFVKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRILD 610
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/502 (53%), Positives = 350/502 (69%), Gaps = 37/502 (7%)
Query: 2 ATPRRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKV 61
A R+LT + + + LVT+ITS ++ LNPQNP+PK+I+ L+QFS L SN+V +V
Sbjct: 7 AATARTLTRHPRSSELASLVTAITSCLETLNPQNPNPKHINPTHLNQFSPHLDSNLVIEV 66
Query: 62 IYEQT-NPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK 120
I EQ NPY ALFFFNWASN NPNPN Y H CY AI D+LLSHSL IA +LL+
Sbjct: 67 IKEQQPNPYQALFFFNWASNLNPNPNNYSHNHRCYVAIIDLLLSHSLFPIAKNLLEKHGT 126
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
SD +SKLI+AYG G+ K+AIFWFH+ K+I+ G CL+S+N++LGVLV+VN I +A+ F
Sbjct: 127 FSDLLVSKLIRAYGYSGDTKSAIFWFHKVKEIQQGKCLFSWNAILGVLVKVNQINVAKSF 186
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL------------- 227
F QIV + VV PD STYTTMIRG+CK+GMI+NA+KVFD M +PNL+
Sbjct: 187 FDQIVNDAVVKPDASTYTTMIRGFCKVGMIDNARKVFDEMICEPNLITCNTLINGYCKKG 246
Query: 228 -----------------------AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
Y+T+I+G+CKKGEL EA+K M+ M+ RGC PN TY
Sbjct: 247 DMENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTY 306
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
NA+IYGLC+ G VDEA+ L+ KMRLNG K+NV+TH S+LKGL V GK ++A+GY ++
Sbjct: 307 NAIIYGLCLRGNVDEARRLLTKMRLNGVKENVATHLSILKGLSVAGKSEEAIGYFSEMIR 366
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
M D K +EVVI +CK+ K DEAISLLKEM+A+G+ +V SFNAV RILVE GELD+
Sbjct: 367 KGMKLDAKEHEVVITAYCKMRKPDEAISLLKEMQAKGISRSVGSFNAVLRILVEIGELDK 426
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A+LLLKQ+ M CLPN VSY+T+ICGLC + GRMQ+V LVD M++ G +D T+YSCL+
Sbjct: 427 AVLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQEVAGLVDDMLQDGFEMDATLYSCLV 486
Query: 445 KGYCEEGNVENVMQIAHEMVTK 466
G+CE GN E M+ ++ + K
Sbjct: 487 GGFCEAGNEEMAMRAFYDSINK 508
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 133/325 (40%), Gaps = 74/325 (22%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L + N+L+ + ++ A F ++++ PD TY+T+I GYCK G + A+K
Sbjct: 232 LITCNTLINGYCKKGDMENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKWM 291
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M ++ PNL YN +I G C +G ++EA++ + +M G + N T+ +++ GL +
Sbjct: 292 DGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNGVKENVATHLSILKGLSVA 351
Query: 275 GRV-----------------------------------DEAKMLMAKMRLNGFKDNVSTH 299
G+ DEA L+ +M+ G +V +
Sbjct: 352 GKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAISLLKEMQAKGISRSVGSF 411
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI--------------------- 338
++L+ L +G+ D+AV L+ V P++ SY VI
Sbjct: 412 NAVLRILVEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQEVAGLVDDML 471
Query: 339 ---------------NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
GFC+ G + A+ + + + SF+ ++ G++
Sbjct: 472 QDGFEMDATLYSCLVGGFCEAGNEEMAMRAFYDSINKNYVINLQSFSFFVNLMCGKGKVI 531
Query: 384 RAILLLKQMPQMDCLPNFVSYNTII 408
A + K M + L + SY ++
Sbjct: 532 EAEQIFKDMCRRCSLVDVDSYQRVL 556
>gi|359475966|ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Vitis vinifera]
Length = 563
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/482 (44%), Positives = 299/482 (62%), Gaps = 56/482 (11%)
Query: 6 RSLTNISQIPDQSILV------TSITSVIQRLNPQNPSPKNISS-QPLDQFSLCLGSNIV 58
R+L N P S + +SITS +Q LNPQNP+P + +S PL QF+ L ++V
Sbjct: 58 RTLANTHASPLASHIAQLLSTASSITSFLQTLNPQNPTPNSPTSISPLSQFAPFLNPSLV 117
Query: 59 TKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNS 118
+VI Q NPYHALFFFNWASNPNPNPN Y H+ CY AITD+L+SH L S A+SLL++
Sbjct: 118 IQVIKSQKNPYHALFFFNWASNPNPNPNNYSHSHLCYVAITDLLISHGLFSTASSLLQSH 177
Query: 119 NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAE 178
++LSDF +K +KAYGDRG+++ AI WFH+AK++E+G CL+SYN++LGV V+ N I LA
Sbjct: 178 HRLSDFAAAKFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLAR 237
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCK 238
F QIVKE VV PDVSTYTT+IRGYCKMGMIENAK VFD M KPNL
Sbjct: 238 AVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEMGCKPNL------------ 285
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G ++EAK+ M M G + N T+ +++ GLC+ G++D+A + +M G + +
Sbjct: 286 -GNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKA 344
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ ++ C +GK D A+ L+ + +NP V S+ V + GK+D+A +L++M+
Sbjct: 345 YGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMK 404
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
G C PNF+SY+T+I GLC AKGRM
Sbjct: 405 QLG-----------------------------------CTPNFLSYSTVIDGLCKAKGRM 429
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLT 478
+VE+ VD M R+GH+LD +MYS L+KGYCE+GN + M++ EM+ G ++ L++FL
Sbjct: 430 HEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEML-DMGYVINLESFLA 488
Query: 479 RV 480
V
Sbjct: 489 FV 490
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCK-KG 240
+K + P VS++ + R + G + A + M PN L+Y+T+I+G CK KG
Sbjct: 368 MKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKG 427
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ E ++ +++M G + Y+ ++ G C +G D A L +M G+ N+ +
Sbjct: 428 RMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFL 487
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
+ +KGL K + + + D+ Y +++
Sbjct: 488 AFVKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRILD 526
>gi|255550123|ref|XP_002516112.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544598|gb|EEF46114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 461
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/464 (46%), Positives = 285/464 (61%), Gaps = 65/464 (14%)
Query: 1 MATPRRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTK 60
MAT LT+ Q P + +VT+IT+ ++ LNPQN +P +I+ PL+QFS L S +V +
Sbjct: 1 MATAANMLTHRLQTPYLTSVVTAITTCLRSLNPQNLNPSHINPAPLNQFSPYLNSQLVIE 60
Query: 61 VIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK 120
VI +Q+NPYHALFFFNWASN PNPN Y H CY AITD+LLSHSL ++A+SLL+N+NK
Sbjct: 61 VIRKQSNPYHALFFFNWASNLCPNPNNYFHNHHCYVAITDLLLSHSLFALASSLLQNANK 120
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
+SD +SK I AYG+ VK AIFWF +AK I N V N +A+
Sbjct: 121 MSDLMVSKFIIAYGNLKEVKRAIFWFDKAKAIGN--------------VNANRFNIAQSI 166
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKG 240
F ++V V PDVSTY MI+GY KM +ENA K+FD M+ +PNL G
Sbjct: 167 FDEMV---AVKPDVSTYAIMIKGYWKMRSVENASKLFDEMSCEPNL-------------G 210
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++EA+K M EM G + N T+ +++ GLC G+ DE
Sbjct: 211 NVDEARKLMTEMRLNGLKENLATHMSILKGLCYAGKSDE--------------------- 249
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
AV Y + ++ M DVK+Y VVIN +CK+ K +EAI+LLKEM+A+
Sbjct: 250 --------------AVNYFKEMIRKGMKCDVKAYAVVINEYCKMKKPNEAIALLKEMKAK 295
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+ P+V SFNAV +IL++ GE D AI LLKQM M C PNF+SYN +I GLC AKGRMQ+
Sbjct: 296 GINPSVSSFNAVIQILMKLGEPDAAIFLLKQMQGMGCRPNFISYNIVIGGLCGAKGRMQN 355
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
V++L+ M+ SG +D TMYS L+KGYCE+GN E Q+ +E +
Sbjct: 356 VKELLHNMLCSGLAVDATMYSSLVKGYCEDGNEEMAKQVLYEAI 399
>gi|356509834|ref|XP_003523650.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 472
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 200/458 (43%), Positives = 278/458 (60%), Gaps = 49/458 (10%)
Query: 9 TNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNP 68
++ + IP+ S LVT IT+++Q +NPQNP PL +FS L N+V VI Q NP
Sbjct: 17 SSTAPIPNLS-LVTCITTILQNINPQNPD-----YSPLREFSSHLTPNLVIHVIKNQNNP 70
Query: 69 YHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISK 128
HAL FFNWASNPNPNPN Y HT CYTAITD+LLSHSL S A SLL++SN+LSD + +
Sbjct: 71 QHALHFFNWASNPNPNPNNYSHTPLCYTAITDLLLSHSLFSTAFSLLRHSNRLSDNLVCR 130
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
I A G RG+++ AI WFHQA G C++S N++LGVLVR N + +A+ + Q++ E
Sbjct: 131 FINALGHRGDIRGAIHWFHQANTFTRGRCVFSCNAILGVLVRANRVNIAKAIYDQVLAEA 190
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
V+ PDV TYTTMIRG+CK+G +E+A+KVFD M +PN++ YNT GE++EA+K
Sbjct: 191 VLEPDVYTYTTMIRGFCKVGKVESARKVFDEMRCEPNIVTYNT--------GEVDEARKM 242
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M+ M G + + T +++ G CI G+ DEA + +M G K +V + ++ C
Sbjct: 243 MSRMRLNGLKDDVATNTSLLKGFCIVGKSDEAVKHLREMVSRGMKPDVKAYGVVVNEYCK 302
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+ K +AV LR ++ + P+V S+ V GK DE + LLK+M
Sbjct: 303 IRKPSEAVLLLREMVVRGVKPNVSSFNAVFRVLVDEGKIDEGLHLLKQM----------- 351
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
P+M C PNF+SY T+ICGLC KGRMQ VE+LV M
Sbjct: 352 ------------------------PKMGCSPNFLSYCTVICGLCEVKGRMQQVEELVSNM 387
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+++GHNLD TMY+CLL GYCE+ + E + ++++ K
Sbjct: 388 LQNGHNLDATMYNCLLLGYCEDRDEEMAQKTVYDIMDK 425
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM-GMIENAKK-VF 217
S+N++ VLV I Q+ K P+ +Y T+I G C++ G ++ ++ V
Sbjct: 327 SFNAVFRVLVDEGKIDEGLHLLKQMPKMGC-SPNFLSYCTVICGLCEVKGRMQQVEELVS 385
Query: 218 DVMTVKPNLLA--YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+++ NL A YN ++ G+C+ + E A+K + ++M++ N+ + + LC G
Sbjct: 386 NMLQNGHNLDATMYNCLLLGYCEDRDEEMAQKTVYDIMDKNFVINQDIFCTFVKLLCAKG 445
Query: 276 RVDEAKMLMAKMR----LNG 291
++ EA+ + +MR LNG
Sbjct: 446 KLKEAETVSEEMRRRCQLNG 465
>gi|356519094|ref|XP_003528209.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g09900-like [Glycine max]
Length = 345
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/425 (38%), Positives = 226/425 (53%), Gaps = 98/425 (23%)
Query: 31 LNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHH 90
LNPQ+P P QFS N+V VI Q +HAL FFN ++
Sbjct: 10 LNPQSPD-----YSPPKQFSSHHTPNLVINVIKNQNILHHALHFFNXSA----------- 53
Query: 91 TTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
S +L + AA+ A F Q++
Sbjct: 54 ------------CSSTLSATAAT--------------------------SGAPFTVPQSQ 75
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ G C+YS N++LGVLVR N + +A+ + Q++ + ++ PDV T
Sbjct: 76 YLHKGHCVYSCNAILGVLVRANCVNIAKAIYDQVLTKAILKPDVYT-------------- 121
Query: 211 ENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
Y TMI G CK G +E A K E+ C PN +TYN
Sbjct: 122 ------------------YTTMICGLCKVGMVESACKVFEEI---PCEPNMVTYNT---- 156
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
G DEA+ +M++MRLNG K++V+ + S+ KG C++G D+ V +LR ++ M PD
Sbjct: 157 ----GEADEARKMMSRMRLNGLKEDVANNTSLSKGFCIMGNSDETVEHLREMVSRGMRPD 212
Query: 331 VKSYEVVI-NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
VK+Y VV+ N +CKI K EA+ LL+EM RG KP++ SFNAVFR+LV+ G+LD+ +LLL
Sbjct: 213 VKAYRVVVVNEYCKIRKPSEAVLLLREMVVRGFKPSMSSFNAVFRVLVDEGKLDKRVLLL 272
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
KQMP+M C PNF+ Y T+ICGLC GRMQ VE+L+ M+++ HNLD TMY+CLL GYCE
Sbjct: 273 KQMPKMGCSPNFLFYCTVICGLCKVNGRMQQVEELIPDMLQNRHNLDATMYNCLLAGYCE 332
Query: 450 EGNVE 454
+G+ E
Sbjct: 333 DGDEE 337
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
LKP V+++ + L + G ++ A + +++P C PN V+YNT G +
Sbjct: 115 LKPDVYTYTTMICGLCKVGMVESACKVFEEIP---CEPNMVTYNT---------GEADEA 162
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
++ RM +G D + L KG+C GN + ++ EMV++ R
Sbjct: 163 RKMMSRMRLNGLKEDVANNTSLSKGFCIMGNSDETVEHLREMVSRGMR 210
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 211/385 (54%), Gaps = 7/385 (1%)
Query: 88 YHHTTPCYTAITDVLLSHSLIS---IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIF 144
Y + P Y A+ L SL S +S+L++ + + + L++A RG ++ A+
Sbjct: 114 YAPSVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173
Query: 145 WFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
+ +YN+L+ R + AE + +E P++ T+ +M+ G
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGL 233
Query: 205 CKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
CK G +E A+KVFD M + P++++YNT+++G+CK G L E+ +EM RG P+
Sbjct: 234 CKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDV 293
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+T+ ++I+ C G +++A L+A+MR G + N T +++ G C G D A+ +
Sbjct: 294 VTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEE 353
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ + + P V Y +ING+CK+G+ D A L++EM A+ +KP V +++ + + G
Sbjct: 354 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 413
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
LD A L ++M + LP+ ++Y+++I GLC K R+ D +L + M++ G D Y+
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK-RLNDACELFENMLQLGVQPDEFTYT 472
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTK 466
L+ G+C+EGNVE + + EM+ K
Sbjct: 473 TLIDGHCKEGNVEKALSLHDEMIRK 497
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 184/395 (46%), Gaps = 90/395 (22%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++NS++ L + ++ A + F ++V+E + P DV +Y T++ GYCK+G + + VF
Sbjct: 223 LVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP-DVVSYNTLLSGYCKVGCLHESLAVF 281
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
MT + P+++ + ++I+ CK G LE+A + +M RG R NE+T+ A+I G C
Sbjct: 282 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 341
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D+A + + +MR G + +V + +++ G C +G+ D A +R + + PDV +Y
Sbjct: 342 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 401
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN--------------- 379
+I+G+CK+G D A L ++M +G+ P +++++ R L E
Sbjct: 402 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461
Query: 380 --------------------GELDRAILLLKQMPQMDCLPNFVSYNTIICGL-------- 411
G +++A+ L +M + LP+ V+Y+ +I GL
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Query: 412 ------------------------------------------CMAKGRMQDVEDLVDRMI 429
CM KG M++ + + M+
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCM-KGLMKEADKVYQSML 580
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
LD ++YS L+ G+C GNV + +M+
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 615
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 182/390 (46%), Gaps = 55/390 (14%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G + ++ F + Q + ++ SL+ + +++ A Q+ +
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ +V T+T +I G+CK G +++A + M ++P+++ YN +ING+CK G ++ A
Sbjct: 324 LRMNEV-TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ + EM + +P+ +TY+ +I G C G +D A L KM G + T+ S+++G
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + + A N+++ + PD +Y +I+G CK G ++A+SL EM +G+ P
Sbjct: 443 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 502
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI-IC--------------G 410
V +++ + L ++ A LL ++ D +P+ + Y+ + +C G
Sbjct: 503 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 562
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC---------------------- 448
CM KG M++ + + M+ LD ++YS L+ G+C
Sbjct: 563 FCM-KGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 621
Query: 449 -------------EEGNVENVMQIAHEMVT 465
EEG V +++T
Sbjct: 622 NSTSTISLVRGLFEEGMVVEADNAIQDLLT 651
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 150/322 (46%), Gaps = 19/322 (5%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+++ A + + ++++ + LI + +G + A+ + ++ + YN+L+
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---P 224
++ + LA E ++ + V PDV TY+T+I GYCK+G +++A ++ M K P
Sbjct: 373 YCKLGRMDLARELIREM-EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 431
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+ + Y+++I G C++ L +A + M+ G +P+E TY +I G C G V++A L
Sbjct: 432 DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLH 491
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD-------------- 330
+M G +V T+ ++ GL + +A L + + PD
Sbjct: 492 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 551
Query: 331 -VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
KS ++ GFC G EA + + M R K ++ + G + +A+
Sbjct: 552 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 611
Query: 390 KQMPQMDCLPNFVSYNTIICGL 411
KQM + PN S +++ GL
Sbjct: 612 KQMLRSGFSPNSTSTISLVRGL 633
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQI 184
S +I Y GN+ +A F +Q K ++ G +Y+SL+ L + A E F +
Sbjct: 402 STIISGYCKVGNLDSA-FQLNQ-KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
++ V PD TYTT+I G+CK G +E A + D M K P+++ Y+ +ING K
Sbjct: 460 LQLGV-QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIY---------------GLCINGRVDEAKMLMAK 286
+EA + + ++ + P+ + Y+A++ G C+ G + EA +
Sbjct: 519 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 578
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M +K + S + ++ G C G +A+ + + ++ + +P+ S ++ G + G
Sbjct: 579 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 638
Query: 347 SDEAISLLKEM 357
EA + ++++
Sbjct: 639 VVEADNAIQDL 649
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 71/204 (34%), Gaps = 70/204 (34%)
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF-------------------- 373
++ +I + + + A + L + G P+V ++NAV
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLSSMLR 145
Query: 374 --------------RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA----- 414
R L G L+ A+ ++ M C PN V+YNT++ C A
Sbjct: 146 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 205
Query: 415 ------------------------------KGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
GRM+ + D M+R G D Y+ LL
Sbjct: 206 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 265
Query: 445 KGYCEEGNVENVMQIAHEMVTKKG 468
GYC+ G + + + EM T++G
Sbjct: 266 SGYCKVGCLHESLAVFSEM-TQRG 288
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 218/407 (53%), Gaps = 17/407 (4%)
Query: 76 NWASNPNPNPNK----------YHHTTPCYTAITDVLLSHSLIS---IAASLLKNSNKLS 122
++AS P P+ Y + P Y A+ L SL S +S+L++ +
Sbjct: 92 SYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPN 151
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
+ + L++A RG ++ A+ + +YN+L+ R + AE
Sbjct: 152 VYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVS 211
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
+ +E P++ T+ +M+ G CK G +E A+KVFD M + P++++YNT+++G+CK
Sbjct: 212 LMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKV 271
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G L E+ +EM RG P+ +T+ ++I+ C G +++A L+A+MR G + N T
Sbjct: 272 GCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTF 331
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G D A+ + + + + P V Y +ING+CK+G+ D A L++EM A
Sbjct: 332 TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEA 391
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+ +KP V +++ + + G LD A L ++M + LP+ ++Y+++I GLC K R+
Sbjct: 392 KRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK-RLN 450
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D +L + M++ G D Y+ L+ G+C+EGNVE + + EM+ K
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 497
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 184/395 (46%), Gaps = 90/395 (22%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++NS++ L + ++ A + F ++V+E + P DV +Y T++ GYCK+G + + VF
Sbjct: 223 LVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP-DVVSYNTLLSGYCKVGCLHESLAVF 281
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
MT + P+++ + ++I+ CK G LE+A + +M RG R NE+T+ A+I G C
Sbjct: 282 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 341
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D+A + + +MR G + +V + +++ G C +G+ D A +R + + PDV +Y
Sbjct: 342 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 401
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN--------------- 379
+I+G+CK+G D A L ++M +G+ P +++++ R L E
Sbjct: 402 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461
Query: 380 --------------------GELDRAILLLKQMPQMDCLPNFVSYNTIICGL-------- 411
G +++A+ L +M + LP+ V+Y+ +I GL
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Query: 412 ------------------------------------------CMAKGRMQDVEDLVDRMI 429
CM KG M++ + + M+
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCM-KGLMKEADKVYQSML 580
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
LD ++YS L+ G+C GNV + +M+
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 615
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 182/390 (46%), Gaps = 55/390 (14%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G + ++ F + Q + ++ SL+ + +++ A Q+ +
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ +V T+T +I G+CK G +++A + M ++P+++ YN +ING+CK G ++ A
Sbjct: 324 LRMNEV-TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ + EM + +P+ +TY+ +I G C G +D A L KM G + T+ S+++G
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + + A N+++ + PD +Y +I+G CK G ++A+SL EM +G+ P
Sbjct: 443 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 502
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI-IC--------------G 410
V +++ + L ++ A LL ++ D +P+ + Y+ + +C G
Sbjct: 503 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 562
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC---------------------- 448
CM KG M++ + + M+ LD ++YS L+ G+C
Sbjct: 563 FCM-KGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 621
Query: 449 -------------EEGNVENVMQIAHEMVT 465
EEG V +++T
Sbjct: 622 NSTSTISLVRGLFEEGMVVEADNAIQDLLT 651
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 154/335 (45%), Gaps = 57/335 (17%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+++ A + + ++++ + LI + +G + A+ + ++ + YN+L+
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA-------------- 213
++ + LA E ++ + V PDV TY+T+I GYCK+G +++A
Sbjct: 373 YCKLGRMDLARELIREM-EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 431
Query: 214 ---------------KKVFDV---------MTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
K++ D + V+P+ Y T+I+G CK+G +E+A
Sbjct: 432 DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLH 491
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHK-------- 300
+EM+ +G P+ +TY+ +I GL + R EA L+ K+ + DN+
Sbjct: 492 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 551
Query: 301 ------SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
++LKG C+ G +A +++++ N D Y ++I+G C+ G +A+S
Sbjct: 552 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 611
Query: 355 KEMRARGLKPTVFSFNAVFRILVENG---ELDRAI 386
K+M G P S ++ R L E G E D AI
Sbjct: 612 KQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 646
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 58/294 (19%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQI 184
S +I Y GN+ +A F +Q K ++ G +Y+SL+ L + A E F +
Sbjct: 402 STIISGYCKVGNLDSA-FQLNQ-KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMING------ 235
++ V PD TYTT+I G+CK G +E A + D M K P+++ Y+ +ING
Sbjct: 460 LQLGV-QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Query: 236 --------------------------------------------FCKKGELEEAKKCMNE 251
FC KG ++EA K
Sbjct: 519 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 578
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M++R + + Y+ +I+G C G V +A +M +GF N ++ S+++GL G
Sbjct: 579 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 638
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+A +++++ D ++ + +I+ K G D I +L M GL P+
Sbjct: 639 VVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 60/177 (33%), Gaps = 70/177 (39%)
Query: 361 GLKPTVFSFNAVF----------------------------------RILVENGELDRAI 386
G P+V ++NAV R L G L+ A+
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMA-------------------------------- 414
++ M C PN V+YNT++ C A
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232
Query: 415 ---KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
GRM+ + D M+R G D Y+ LL GYC+ G + + + EM T++G
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM-TQRG 288
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 216/385 (56%), Gaps = 14/385 (3%)
Query: 95 YTAITDVLLSHSLIS---IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQ 151
Y A+ L SL S + AS+L++ + + + L++A RG + A+
Sbjct: 123 YNAVLLALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVV--GDD 180
Query: 152 IENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
+ C + +YN+L+ R + AE +++E V P + T+ T++ G CK G
Sbjct: 181 MRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLV-GVMREGGVRPSLVTFNTVVNGLCKAG 239
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+E+A+K+FD M + P+ ++YNT+++G+CK G L EA EM +G P+ +T+
Sbjct: 240 RMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFT 299
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
++I+ +C G ++ A L+ +MR G + N T +++ G C G D A+ ++ + E
Sbjct: 300 SLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMREC 359
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ P V Y V+ING+CK+G+ DEA L+ EM A+G+KP V +++ + + G+ D A
Sbjct: 360 RIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSA 419
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L ++M + +P+ ++Y+++I GLC + R+ D +L ++M++ G D Y+ L+
Sbjct: 420 FELNRKMLKKGVVPDAITYSSLIRGLCEER-RLGDACELFEKMLQLGLQPDEFTYTTLID 478
Query: 446 GYCEEGNVENVMQIAHEMVTKKGRL 470
G+C+EGNV+ + + EM+ KKG L
Sbjct: 479 GHCKEGNVQKALSLHDEMI-KKGVL 502
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 184/423 (43%), Gaps = 88/423 (20%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A+ G V AA ++ L ++N+++ L + ++ A + F ++ +E
Sbjct: 196 LVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG 255
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+ P VS Y T++ GYCK G + A VF M K P+++ + ++I+ C+ G LE A
Sbjct: 256 LTPDGVS-YNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERA 314
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M RG R NE T+ A+I G C NG +D+A + M +MR + +V + ++ G
Sbjct: 315 VALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLING 374
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C +G+ D+A + + M PDV +Y +++G+CKIG +D A L ++M +G+ P
Sbjct: 375 YCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPD 434
Query: 366 VFSFNAVFRILVEN-----------------------------------GELDRAILLLK 390
+++++ R L E G + +A+ L
Sbjct: 435 AITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHD 494
Query: 391 QMPQMDCLPNFVSYNTIICGLCMA------------------------------------ 414
+M + LP+ V+Y+ +I GL +
Sbjct: 495 EMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAE 554
Query: 415 -------------KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
KG M + + M+ LD ++YS L+ G+C GN+ +
Sbjct: 555 FKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHK 614
Query: 462 EMV 464
+++
Sbjct: 615 QLL 617
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 136/270 (50%), Gaps = 19/270 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A H+ + + +Y+++L ++ A E +++K+
Sbjct: 371 LINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG 430
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
VVP D TY+++IRG C+ + +A ++F+ M ++P+ Y T+I+G CK+G +++A
Sbjct: 431 VVP-DAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKA 489
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL-NGFKDNVSTHK---- 300
+EM+ +G P+ +TY+ +I GL + R EA+ L+ K+ + DN+
Sbjct: 490 LSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHC 549
Query: 301 ----------SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
++LKG + G +QA +++++ + D Y V+I+G C+ G +A
Sbjct: 550 CRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKA 609
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+S K++ G P S ++ R L E G
Sbjct: 610 LSFHKQLLRCGFSPNSTSTISLVRGLFEEG 639
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 19/322 (5%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+++ + + ++++F + LI + G + A+ + ++ + YN L+
Sbjct: 315 VALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLING 374
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---P 224
++ + A E H++ + + PDV TY+T++ GYCK+G ++A ++ M K P
Sbjct: 375 YCKLGRMDEARELIHEMEAKGM-KPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVP 433
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+ + Y+++I G C++ L +A + +M+ G +P+E TY +I G C G V +A L
Sbjct: 434 DAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLH 493
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV-------- 336
+M G +V T+ ++ GL + +A L + + PD YE
Sbjct: 494 DEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTA 553
Query: 337 -------VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
++ GF G ++A + + M R K ++ + G + +A+
Sbjct: 554 EFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFH 613
Query: 390 KQMPQMDCLPNFVSYNTIICGL 411
KQ+ + PN S +++ GL
Sbjct: 614 KQLLRCGFSPNSTSTISLVRGL 635
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 118/280 (42%), Gaps = 22/280 (7%)
Query: 78 ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRG 137
A P+ Y Y I D + S + +LK S LI+ +
Sbjct: 393 AKGMKPDVVTYSTILSGYCKIGD---TDSAFELNRKMLKKGVVPDAITYSSLIRGLCEER 449
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
+ A F + Q+ ++Y +L+ + +++ A +++K+ V+P DV TY
Sbjct: 450 RLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLP-DVVTY 508
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMIN---------------GFCKK 239
+ +I G K + A+++ + + P+ + Y +++ GF K
Sbjct: 509 SVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMK 568
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G + +A K M++R + + Y+ +I+G C G + +A ++ GF N ++
Sbjct: 569 GLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTST 628
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
S+++GL G +A ++ ++ D ++ + +I+
Sbjct: 629 ISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALID 668
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 209/387 (54%), Gaps = 12/387 (3%)
Query: 93 PCYTAITDVLLSHSLISIAASLLKNSNKLSD------FFISKLIKAYGDRGNVKAAIFWF 146
P A VLL+ S S+ ++ + LSD + + L++A RG+ K A+
Sbjct: 154 PSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSIL 213
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ G + +YN+L+ R + AE +++E + P++ T+ +M+ G CK
Sbjct: 214 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLV-GMMREGGLKPNLVTFNSMVNGMCK 272
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G +E+A+KVFD M + P+ ++YNT++ G+CK G EA EM +G P+ +T
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
+ ++I+ +C G ++ A L+ +MR G + N T +++ G C G D A+ +R +
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK 392
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ + P V Y +ING+C +G+ DEA LL EM A+GLKP V +++ + +N +
Sbjct: 393 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 452
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A L +QM + LP+ ++Y+++I LC K R+ D L MI+ G D Y+ L
Sbjct: 453 SAFELNQQMLEKGVLPDAITYSSLIRVLCGEK-RLSDAHVLFKNMIKLGLQPDEFTYTSL 511
Query: 444 LKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ G+C+EGNVE+ + + H+ + K G L
Sbjct: 512 IDGHCKEGNVESALSL-HDKMVKAGVL 537
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 185/424 (43%), Gaps = 90/424 (21%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A+ G V A ++ L ++NS++ + + ++ A + F ++V+E
Sbjct: 231 LVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG 290
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+ P VS Y T++ GYCK G A VF MT K P+++ + ++I+ CK G LE A
Sbjct: 291 LAPDGVS-YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERA 349
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M RG + NE+T+ A+I G C G +D+A + + M+ K +V + +++ G
Sbjct: 350 VTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALING 409
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C+VG+ D+A L + + PDV +Y +I+ +CK + A L ++M +G+ P
Sbjct: 410 YCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPD 469
Query: 366 VFSFNAVFRILV-----------------------------------ENGELDRAILLLK 390
+++++ R+L + G ++ A+ L
Sbjct: 470 AITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHD 529
Query: 391 QMPQMDCLPNFVSYNTIICGL--------------------------------------- 411
+M + LP+ V+Y+ +I GL
Sbjct: 530 KMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAE 589
Query: 412 -----------CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
CM KG M + + + M+ NLD ++YS L+ G+C GNV +
Sbjct: 590 LKSVLALLKGFCM-KGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFH 648
Query: 461 HEMV 464
+M+
Sbjct: 649 KQML 652
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 167/366 (45%), Gaps = 55/366 (15%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
++++ + LI + +G + A+ KQ + YN+L+ V + A E
Sbjct: 362 QMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARE 421
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCK----------------MGMIENA---------- 213
H++ + + PDV TY+T+I YCK G++ +A
Sbjct: 422 LLHEMEAKGL-KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVL 480
Query: 214 ---KKVFDV---------MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
K++ D + ++P+ Y ++I+G CK+G +E A ++M+ G P+
Sbjct: 481 CGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDV 540
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKM----------RLNGF-----KDNVSTHKSMLKGL 306
+TY+ +I GL + R EA+ L+ K+ + + K + + ++LKG
Sbjct: 541 VTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGF 600
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C+ G ++A +++++ N N D Y V+I+G C+ G +A+S K+M G P
Sbjct: 601 CMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNS 660
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
S ++ R L ENG + A +++Q+ L + + +I L + +G + V D++
Sbjct: 661 TSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALI-DLNLNEGNVDAVLDVLH 719
Query: 427 RMIRSG 432
M + G
Sbjct: 720 GMAKDG 725
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 58/294 (19%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQI 184
S +I AY + +A F +Q + +E G +Y+SL+ VL + A F +
Sbjct: 439 STIISAYCKNCDTHSA-FELNQ-QMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNM 496
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING------ 235
+K + PD TYT++I G+CK G +E+A + D M V P+++ Y+ +ING
Sbjct: 497 IKLGL-QPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 555
Query: 236 --------------------------------------------FCKKGELEEAKKCMNE 251
FC KG + EA K
Sbjct: 556 AMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQS 615
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M++R + Y+ +I+G C G V +A +M GF N ++ S+++GL G
Sbjct: 616 MLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGM 675
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+A ++ ++ D ++ + +I+ G D + +L M GL P+
Sbjct: 676 VVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 61/177 (34%), Gaps = 71/177 (40%)
Query: 361 GLKPTVFSFNAVF----------------------------------RILVENGELDRAI 386
G P+V ++NAV R L G A+
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210
Query: 387 LLLKQMPQMDCLPNFVSYNTIIC-----------------------------------GL 411
+L+ M C PN V+YNT++ G+
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
C A G+M+D + D M+R G D Y+ L+ GYC+ G + + EM T+KG
Sbjct: 271 CKA-GKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM-TQKG 325
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 240/491 (48%), Gaps = 24/491 (4%)
Query: 9 TNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNP 68
N+ + + + +V++ +NP + L++ + L S IV V+ EQ P
Sbjct: 26 ANLFTTAQGAAISNEVLTVMETVNPMEDA--------LEKLAPFLSSEIVNDVMREQRRP 77
Query: 69 YHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL---KNSN-KLSDF 124
FF W + + + + + D+L +L KNSN ++
Sbjct: 78 ELGFRFFIWTTR-----RRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPP 132
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
S LI AY G + A+ F + K +++YNS+L V+V+ LA ++Q+
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+K N P+ +T+ ++ G CK G ++A K+FD MT K PN + Y +++G C+
Sbjct: 193 LKLNY-NPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKR 251
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++ + +N M GC P+ +T NA++ G C G++DEA L+ G+ + + S
Sbjct: 252 TDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSS 311
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GL ++D+ + R + +A + PDV Y ++I GFC++G D A+++L +M RG
Sbjct: 312 LIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRG 371
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L P + +NA+ + + G LD+A L ++ + DC P +Y +ICG+C G + +
Sbjct: 372 LSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMC-RNGLLDEA 430
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK--GRLLKLKNFLTR 479
+ ++M G + ++ L+ G C+ G +E + ++M K L+L R
Sbjct: 431 RQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADR 490
Query: 480 VVDALLLMWIV 490
V+D L +V
Sbjct: 491 VMDTASLQTMV 501
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 148/321 (46%), Gaps = 22/321 (6%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG----MIENAKKVF 217
N+LL ++ I A KE V + Y+++I G + + E +K+F
Sbjct: 275 NALLDGFCKLGQIDEAFALLQLFEKEGYVL-GIKGYSSLIDGLFRAKRYDEVQEWCRKMF 333
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
++P+++ Y +I GFC+ G ++ A +N+M RG P+ YNA+I G C G +
Sbjct: 334 KA-GIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLL 392
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D+A+ L ++ N T+ ++ G+C G D+A + +P + ++ +
Sbjct: 393 DKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNAL 452
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVF--------------SFNAVFRILVENGELD 383
I+G CK G+ +EA L +M G P++F S + L E+G +
Sbjct: 453 IDGLCKAGELEEARHLFYKMEI-GKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLIL 511
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+A LL Q+ +P+ ++YN +I G C AK + L + GH+ D Y L
Sbjct: 512 KAYKLLMQLADSGVVPDIMTYNVLINGFCKAKN-INGAFKLFRELQLKGHSPDSVTYGTL 570
Query: 444 LKGYCEEGNVENVMQIAHEMV 464
+ G+ E+ ++ +MV
Sbjct: 571 IDGFHRVDREEDAFRVLDQMV 591
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 165/393 (41%), Gaps = 76/393 (19%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+ + + G V A+ + Q Y YN+L+ V + A +I K +
Sbjct: 347 LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKND 406
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P TYT +I G C+ G+++ A+++F+ M P+++ +N +I+G CK GELEEA
Sbjct: 407 CFPTSC-TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Query: 246 K------------------------------------------------KCMNEMMNRGC 257
+ K + ++ + G
Sbjct: 466 RHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGV 525
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +TYN +I G C ++ A L +++L G + T+ +++ G V + + A
Sbjct: 526 VPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFR 585
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL-LKEMRA------RGLKPTVFSFN 370
L +++ P Y+ ++ C+ GK A SL LK +R+ LK F
Sbjct: 586 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHF- 644
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNF--VSYNTIICGLCMAKGRMQDVEDLVDRM 428
E GEL++A+ L +M L NF Y + GLC A+ + E L +
Sbjct: 645 -------EKGELEKAVRCLLEMNFK--LNNFEIAPYTIWLIGLCQAR---RSEEALKIFL 692
Query: 429 IRSGHNLDFTMYSC--LLKGYCEEGNVENVMQI 459
+ +D SC L+ G C++GN+E + I
Sbjct: 693 VLKECQMDVNPPSCVMLINGLCKDGNLEMAVDI 725
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 180/425 (42%), Gaps = 69/425 (16%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISK- 128
+AL N + +P+ Y CY A+ L+ A SL +K +D F +
Sbjct: 359 YALNMLNDMTQRGLSPDTY-----CYNALIKGFCDVGLLDKARSLQLEISK-NDCFPTSC 412
Query: 129 ----LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
LI G + A F+Q + + + ++N+L+ L + ++ A F+++
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472
Query: 185 -VKENVVPP-------------DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLL 227
+ +N P D ++ TM+ C+ G+I A K+ + V P+++
Sbjct: 473 EIGKN--PSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIM 530
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YN +INGFCK + A K E+ +G P+ +TY +I G R ++A ++ +M
Sbjct: 531 TYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQM 590
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGK----FDQAVGYLRNV--------------------- 322
NG + + +K ++ C GK F + YLR++
Sbjct: 591 VKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELE 650
Query: 323 ------MEANM---NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+E N N ++ Y + + G C+ +S+EA+ + ++ + S +
Sbjct: 651 KAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLI 710
Query: 374 RILVENGELDRA--ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
L ++G L+ A I L +P N ++ L + + +M+ DL++RM +
Sbjct: 711 NGLCKDGNLEMAVDIFLYTLEKGFMLMPRIC--NQLLRSLIL-QDKMKHALDLLNRMNSA 767
Query: 432 GHNLD 436
G++LD
Sbjct: 768 GYDLD 772
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 192/341 (56%), Gaps = 4/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L++A RG ++ A+ + +YN+L+ R + AE + +E
Sbjct: 16 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 75
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P++ T+ +M+ G CK G +E A+KVFD M + P++++YNT+++G+CK G L E+
Sbjct: 76 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 135
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+EM RG P+ +T+ ++I+ C G +++A L+A+MR G + N T +++ G
Sbjct: 136 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 195
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G D A+ + + + + P V Y +ING+CK+G+ D A L++EM A+ +KP
Sbjct: 196 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 255
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V +++ + + G LD A L ++M + LP+ ++Y+++I GLC K R+ D +L
Sbjct: 256 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK-RLNDACELF 314
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M++ G D Y+ L+ G+C+EGNVE + + EM+ K
Sbjct: 315 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 355
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 158/285 (55%), Gaps = 6/285 (2%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAK 246
V P+V TY ++R C G +E A V M PN + YNT++ FC+ GEL+ A+
Sbjct: 6 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 65
Query: 247 KCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ M G +PN +T+N+M+ GLC GR++ A+ + +M G +V ++ ++L G
Sbjct: 66 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 125
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C VG +++ + + + PDV ++ +I+ CK G ++A++L+ +MR RGL+
Sbjct: 126 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 185
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+F A+ + G LD A+L +++M + P+ V YN +I G C GRM +L+
Sbjct: 186 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKL-GRMDLARELI 244
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
M D YS ++ GYC+ GN+++ Q+ +M+ KKG L
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML-KKGVL 288
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 184/395 (46%), Gaps = 90/395 (22%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++NS++ L + ++ A + F ++V+E + P DV +Y T++ GYCK+G + + VF
Sbjct: 81 LVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP-DVVSYNTLLSGYCKVGCLHESLAVF 139
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
MT + P+++ + ++I+ CK G LE+A + +M RG R NE+T+ A+I G C
Sbjct: 140 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 199
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D+A + + +MR G + +V + +++ G C +G+ D A +R + + PDV +Y
Sbjct: 200 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 259
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN--------------- 379
+I+G+CK+G D A L ++M +G+ P +++++ R L E
Sbjct: 260 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 319
Query: 380 --------------------GELDRAILLLKQMPQMDCLPNFVSYNTIICGL-------- 411
G +++A+ L +M + LP+ V+Y+ +I GL
Sbjct: 320 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 379
Query: 412 ------------------------------------------CMAKGRMQDVEDLVDRMI 429
CM KG M++ + + M+
Sbjct: 380 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCM-KGLMKEADKVYQSML 438
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
LD ++YS L+ G+C GNV + +M+
Sbjct: 439 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 473
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 182/390 (46%), Gaps = 55/390 (14%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G + ++ F + Q + ++ SL+ + +++ A Q+ +
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ +V T+T +I G+CK G +++A + M ++P+++ YN +ING+CK G ++ A
Sbjct: 182 LRMNEV-TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ + EM + +P+ +TY+ +I G C G +D A L KM G + T+ S+++G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + + A N+++ + PD +Y +I+G CK G ++A+SL EM +G+ P
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI-IC--------------G 410
V +++ + L ++ A LL ++ D +P+ + Y+ + +C G
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 420
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC---------------------- 448
CM KG M++ + + M+ LD ++YS L+ G+C
Sbjct: 421 FCM-KGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 479
Query: 449 -------------EEGNVENVMQIAHEMVT 465
EEG V +++T
Sbjct: 480 NSTSTISLVRGLFEEGMVVEADNAIQDLLT 509
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 37/252 (14%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-------------------- 291
M+ G PN TYN ++ LC GR++EA ++ MR G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 292 ----------------FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
K N+ T SM+ GLC G+ + A ++ + PDV SY
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++G+CK+G E++++ EM RGL P V +F ++ + G L++A+ L+ QM +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
N V++ +I G C KG + D V+ M + G Y+ L+ GYC+ G ++
Sbjct: 181 GLRMNEVTFTALIDGFC-KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 239
Query: 456 VMQIAHEMVTKK 467
++ EM K+
Sbjct: 240 ARELIREMEAKR 251
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 154/335 (45%), Gaps = 57/335 (17%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+++ A + + ++++ + LI + +G + A+ + ++ + YN+L+
Sbjct: 171 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 230
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA-------------- 213
++ + LA E ++ + V PDV TY+T+I GYCK+G +++A
Sbjct: 231 YCKLGRMDLARELIREM-EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 289
Query: 214 ---------------KKVFDV---------MTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
K++ D + V+P+ Y T+I+G CK+G +E+A
Sbjct: 290 DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLH 349
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHK-------- 300
+EM+ +G P+ +TY+ +I GL + R EA L+ K+ + DN+
Sbjct: 350 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 409
Query: 301 ------SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
++LKG C+ G +A +++++ N D Y ++I+G C+ G +A+S
Sbjct: 410 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 469
Query: 355 KEMRARGLKPTVFSFNAVFRILVENG---ELDRAI 386
K+M G P S ++ R L E G E D AI
Sbjct: 470 KQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 504
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 62/331 (18%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQA 149
CY A+ + + +A L++ K S +I Y GN+ +A F +Q
Sbjct: 223 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSA-FQLNQ- 280
Query: 150 KQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
K ++ G +Y+SL+ L + A E F +++ V PD TYTT+I G+CK
Sbjct: 281 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV-QPDEFTYTTLIDGHCKE 339
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMING----------------------------- 235
G +E A + D M K P+++ Y+ +ING
Sbjct: 340 GNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY 399
Query: 236 ---------------------FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
FC KG ++EA K M++R + + Y+ +I+G C
Sbjct: 400 DALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRG 459
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G V +A +M +GF N ++ S+++GL G +A +++++ D ++
Sbjct: 460 GNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEAS 519
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+ +I+ K G D I +L M GL P+
Sbjct: 520 KALIDLNRKEGNVDALIDVLCGMARDGLLPS 550
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 237/484 (48%), Gaps = 24/484 (4%)
Query: 9 TNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNP 68
N+ + + + +V++ +NP + L++ + L S IV V+ EQ P
Sbjct: 26 ANLFTTAQGAAISNEVLTVMETVNPMEDA--------LEKLAPFLSSEIVNDVMREQRRP 77
Query: 69 YHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL---KNSN-KLSDF 124
FF W + + + + + D+L +L KNSN ++
Sbjct: 78 ELGFRFFIWTTR-----RRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPP 132
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
S LI AY G + A+ F + K +++YNS+L V+V+ LA ++Q+
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+K N P+ +T+ ++ G CK G ++A K+FD MT K PN + Y +++G C+
Sbjct: 193 LKLNY-NPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKR 251
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++ + +N M GC P+ +T NA++ G C G++DEA L+ G+ + + S
Sbjct: 252 TDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSS 311
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GL ++D+ + R + +A + PDV Y ++I GFC++G D A+++L +M RG
Sbjct: 312 LIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRG 371
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L P + +NA+ + + G LD+A L ++ + DC P +Y +ICG+C G + +
Sbjct: 372 LSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMC-RNGLLDEA 430
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK--GRLLKLKNFLTR 479
+ ++M G + ++ L+ G C+ G +E + ++M K L+L R
Sbjct: 431 RQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADR 490
Query: 480 VVDA 483
V+D
Sbjct: 491 VMDT 494
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 164/353 (46%), Gaps = 64/353 (18%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
Y+SL+ L R +E+ ++ K + PDV YT +IRG+C++GM++ A + +
Sbjct: 308 GYSSLIDGLFRAKRYDEVQEWCRKMFKAGI-EPDVVLYTILIRGFCEVGMVDYALNMLND 366
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT + P+ YN +I GFC G L++A+ E+ C P TY +I G+C NG
Sbjct: 367 MTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGL 426
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV----- 331
+DEA+ + +M G ++ T +++ GLC G+ ++A +L ME NP +
Sbjct: 427 LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA-RHLFYKMEIGKNPSLFLRLS 485
Query: 332 KSYEVVI---NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV----------- 377
+ + V+ NGF ++ + ++A +L +M G P+ +AV++ L+
Sbjct: 486 QGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPS----SAVYKCLMTWSCRKGKLSV 541
Query: 378 ---------------------------ENGELDRAILLLKQMPQMDCLPNF--VSYNTII 408
E GEL++A+ L +M L NF Y +
Sbjct: 542 AFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFK--LNNFEIAPYTIWL 599
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC--LLKGYCEEGNVENVMQI 459
GLC A+ + E L ++ +D SC L+ G C++GN+E + I
Sbjct: 600 IGLCQAR---RSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDI 649
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 133/345 (38%), Gaps = 84/345 (24%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+ + + G V A+ + Q Y YN+L+ V + A +I K +
Sbjct: 347 LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKND 406
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P TYT +I G C+ G+++ A+++F+ M P+++ +N +I+G CK GELEEA
Sbjct: 407 CFPTSC-TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Query: 246 K------------------------------------------KCMNEMMNRGCRPNELT 263
+ + +++M+ GC P+
Sbjct: 466 RHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAV 525
Query: 264 YNAMIYGLCINGRVDEAKMLMAK------------------------------------M 287
Y ++ C G++ A L K
Sbjct: 526 YKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNF 585
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+LN F+ ++ + L GLC + ++A+ + E M+ + S ++ING CK G
Sbjct: 586 KLNNFE--IAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNL 643
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+ A+ + +G N + R L+ ++ A+ LL +M
Sbjct: 644 EMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRM 688
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 207/387 (53%), Gaps = 12/387 (3%)
Query: 93 PCYTAITDVLLSHSLISIAASLLKNSNKLSD------FFISKLIKAYGDRGNVKAAIFWF 146
P A VLL+ S S+ ++ + LSD + + LI+A RG+ K A+
Sbjct: 114 PSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSIL 173
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ G + +YN+L+ R + AE ++ + + P++ T+ +M+ G CK
Sbjct: 174 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMML-DGGLKPNLVTFNSMVNGMCK 232
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G +E+A+KVFD M + P+ ++YNT++ G+CK G EA EM +G P+ +T
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
+ ++I+ +C G ++ A L+ +MR G + N T +++ G C G D A+ +R +
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ + P V Y +ING+C +G+ DEA LL EM A+GLKP V +++ + +N +
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A L +QM + LP+ ++Y+++I LC K R+ D L MI+ G D Y+ L
Sbjct: 413 SAFELNQQMLEKGVLPDAITYSSLIRVLCEEK-RLSDAHVLFKNMIKLGLQPDEFTYTSL 471
Query: 444 LKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ G+C+EGNVE + + H+ + K G L
Sbjct: 472 IDGHCKEGNVERALSL-HDKMVKAGVL 497
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 176/356 (49%), Gaps = 20/356 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G A+ F + Q + ++ SL+ V+ + +++ A Q+ +E
Sbjct: 261 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQM-RER 319
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ + T+T +I G+CK G +++A M +KP+++ YN +ING+C G ++EA
Sbjct: 320 GLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEA 379
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ ++EM +G +P+ +TY+ +I C N A L +M G + T+ S+++
Sbjct: 380 RELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRV 439
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + A +N+++ + PD +Y +I+G CK G + A+SL +M G+ P
Sbjct: 440 LCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPD 499
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII-C--------------G 410
V +++ + L ++ A LL ++ + +P Y+ ++ C G
Sbjct: 500 VVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKG 559
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
CM KG M + + + M+ NLD ++YS L+ G+C GNV + +M+ +
Sbjct: 560 FCM-KGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQR 614
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 159/322 (49%), Gaps = 20/322 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A H+ + + +Y++++ + A E Q++++
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V+P D TY+++IR C+ + +A +F M ++P+ Y ++I+G CK+G +E A
Sbjct: 426 VLP-DAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERA 484
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM----------RLNGF--- 292
++M+ G P+ +TY+ +I GL + R EA+ L+ K+ + +
Sbjct: 485 LSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHC 544
Query: 293 --KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
K + + ++LKG C+ G ++A +++++ N N D Y V+I+G C+ G +A
Sbjct: 545 CRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKA 604
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+S K+M RG P S ++ R L ENG + A +++Q+ L + + +I
Sbjct: 605 LSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALI-D 663
Query: 411 LCMAKGRMQDVEDLVDRMIRSG 432
L + +G + V D++ M + G
Sbjct: 664 LNLNEGNVDAVLDVLHGMAKDG 685
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 58/294 (19%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQI 184
S +I AY + +A F +Q + +E G +Y+SL+ VL + A F +
Sbjct: 399 STIISAYCKNCDTHSA-FELNQ-QMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNM 456
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING------ 235
+K + PD TYT++I G+CK G +E A + D M V P+++ Y+ +ING
Sbjct: 457 IKLGL-QPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 515
Query: 236 --------------------------------------------FCKKGELEEAKKCMNE 251
FC KG + EA K
Sbjct: 516 AMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQS 575
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M++R + Y+ +I+G C G V +A +M GF N ++ S+++GL G
Sbjct: 576 MLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGM 635
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+A ++ ++ D ++ + +I+ G D + +L M GL P+
Sbjct: 636 VVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 71/203 (34%), Gaps = 74/203 (36%)
Query: 361 GLKPTVFSFNAVF----------------------------------RILVENGELDRAI 386
G P+V ++NAV R L G A+
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170
Query: 387 LLLKQMPQMDCLPNFVSYNTIIC-----------------------------------GL 411
+L+ M C PN V+YNT++ G+
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLL 471
C A G+M+D + D M+R G D Y+ L+ GYC+ G + + EM T+KG +
Sbjct: 231 CKA-GKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM-TQKGIMP 288
Query: 472 KLKNFLTRV---VDALLLMWIVT 491
+ F + + A L W VT
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVT 311
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 239/476 (50%), Gaps = 24/476 (5%)
Query: 24 ITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNP 83
+ ++I +NP P+ + S P L +IVT +I N FF WAS
Sbjct: 36 VLTIIDSVNPIEPALE--SKVPF------LSPSIVTYIIKNPPNSLLGFRFFIWASKFRR 87
Query: 84 NPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK----LSDFFISKLIKAYGDRGNV 139
+ H I D+L+ + + +LK + +S + LI+AY +
Sbjct: 88 LRSWVSHNM-----IIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMI 142
Query: 140 KAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTT 199
+ A+ F K + +++YN++L V+VR + LA +++++K N +P +++T++
Sbjct: 143 EKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLP-NIATFSI 201
Query: 200 MIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
+I G CK G +NA ++FD MT + PN + Y +I+G C+ + + A + M + G
Sbjct: 202 LIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHG 261
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C P+ +TYNA+++G C GRVDEA L+ + + + + ++ GL +F+ A
Sbjct: 262 CIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQ 321
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ R + E N+ PDV Y +++ G K GK +A+ LL EM RGL P +NA+ +
Sbjct: 322 VWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGY 381
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ G LD A L ++ + DC + +Y +ICG+C + G + D + + + M + G
Sbjct: 382 CDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRS-GLVGDAQQIFNEMEKHGCYPS 440
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTKK--GRLLKLKNFLTRVVDALLLMWIV 490
++ L+ G+C+ GN+E + ++M + L+L RV+D L +V
Sbjct: 441 VVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMV 496
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 161/356 (45%), Gaps = 37/356 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIK Y D G + A + + + + +Y L+ + R + A++ F+++ K
Sbjct: 377 LIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHG 436
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV--KPNLL--------------AYNTM 232
P V T+ +I G+CK G IE A+ +F M + P+L + TM
Sbjct: 437 CYP-SVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTM 495
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+ C G + +A + ++ + G PN +TYN +I+G C G ++ A L +++L G
Sbjct: 496 VEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGL 555
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ T+ +++ GL + + A L +++ P + Y+ + C+ K A S
Sbjct: 556 SPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFS 615
Query: 353 L-LKEMRARGLKPTVFSFNAVFRILVEN---GELDRAILLLKQMPQMDCLPN---FVSYN 405
L LK +R+ + + V + + EN GE++ A+ + + +MD N Y
Sbjct: 616 LWLKYLRSIPGRDS-----EVLKSVEENFEKGEVEEAV---RGLLEMDFKLNDFQLAPYT 667
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC--LLKGYCEEGNVENVMQI 459
+ GLC A GR++ E L HN+ T SC L+ + GN++ +I
Sbjct: 668 IWLIGLCQA-GRLE--EALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEI 720
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 181/306 (59%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ + +V + A + F +++ + + PDV TY+ +I G+C +G + +A +F+ M
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGI-SPDVVTYSALISGFCILGKLNDAIDLFNKM 286
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+KP++ +N ++N FCK G+++E K + MM +G +PN +TYN+++ G C+ V
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
++AK + M G ++ ++ M+ G C + KFD+A+ + + N+ PDV +Y +
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K G+ A+ L+ +M RG+ PT+ ++N++ L + ++D+AI LL ++
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGI 466
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +Y+ +I GLC + G+++D + + ++ GHNL+ Y+ +++G+C EG +
Sbjct: 467 QPNMYTYSILIKGLCQS-GKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEAL 525
Query: 458 QIAHEM 463
+ +M
Sbjct: 526 ALLSKM 531
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 224/458 (48%), Gaps = 28/458 (6%)
Query: 21 VTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWA-- 78
V S+ RL +N +P P +F+ LGS + +K YH + + +
Sbjct: 66 VDDAVSLFNRLLRRNTTP------PAFEFNKILGSLVKSK-------HYHTVLYLSQKME 112
Query: 79 -SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRG 137
PN + C+ + + + S+ A +LK + LIK +G
Sbjct: 113 FRGIKPNLVNCNILINCFCQLGLIPFA---FSVFAKILKMGYVPDTITFTTLIKGLCLKG 169
Query: 138 NVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
++ A F FH K + G SY +L+ L +V + A + Q V N+V P+V
Sbjct: 170 QIQQA-FLFHD-KVVALGFHFDQISYGTLIHGLCKVGETRAALDLL-QRVDGNLVQPNVV 226
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
Y T+I CK+ ++ A +F M K P+++ Y+ +I+GFC G+L +A N+M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ +P+ T+N ++ C +G++ E K + M G K N T+ S++ G C+V +
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
++A + + +NPD++SY ++INGFCKI K DEA++L KEM + + P V +++++
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L ++G + A+ L+ QM P +YN+I+ LC ++ L+ ++ G
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIH-QVDKAIALLTKLKDKG 465
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ YS L+KG C+ G +E+ ++ ++ K L
Sbjct: 466 IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNL 503
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 177/353 (50%), Gaps = 5/353 (1%)
Query: 117 NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKL 176
+S+K++ S + +V A+ F++ + + +N +LG LV+
Sbjct: 44 SSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHT 103
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV---MTVKPNLLAYNTMI 233
+ Q ++ + P++ +I +C++G+I A VF M P+ + + T+I
Sbjct: 104 VL-YLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLI 162
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
G C KG++++A ++++ G ++++Y +I+GLC G A L+ ++ N +
Sbjct: 163 KGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQ 222
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
NV + +++ +C V ++A ++ ++PDV +Y +I+GFC +GK ++AI L
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
+M +KP V++FN + ++G++ + M + PNFV+YN+++ G C+
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
K + + + + M + G N D YS ++ G+C+ + M + EM K
Sbjct: 343 VK-EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK 394
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 156/309 (50%), Gaps = 5/309 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + G + AI F++ +Y++N L+ + +K + F ++K
Sbjct: 264 SALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMK 323
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + P+ TY +++ GYC + + AK +F+ M V P++ +Y+ MINGFCK + +
Sbjct: 324 QGI-KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFD 382
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA EM + P+ +TY+++I GL +GR+ A L+ +M G + T+ S+L
Sbjct: 383 EAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSIL 442
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC + + D+A+ L + + + P++ +Y ++I G C+ GK ++A + + + +G
Sbjct: 443 DALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHN 502
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
V ++ + + G + A+ LL +M C+P+ +Y II L K E
Sbjct: 503 LNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL-FKKDENDMAEK 561
Query: 424 LVDRMIRSG 432
L+ MI G
Sbjct: 562 LLREMIARG 570
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 123/208 (59%), Gaps = 4/208 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SY+ ++ ++ A F ++ ++N++P DV TY+++I G K G I A ++ D
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIP-DVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P + YN++++ CK ++++A + ++ ++G +PN TY+ +I GLC +G+
Sbjct: 426 MHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+++A+ + + + G NV T+ M++G CV G F++A+ L + + PD K+YE+
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKP 364
+I K ++D A LL+EM ARG++P
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 39/175 (22%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI G + A+ Q + +YNS+L L +++ + A ++ K
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL-K 462
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFC------ 237
+ + P++ TY+ +I+G C+ G +E+A+KVF+ + VK N+ Y MI GFC
Sbjct: 463 DKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFN 522
Query: 238 -----------------------------KKGELEEAKKCMNEMMNRGCRPNELT 263
KK E + A+K + EM+ RG RP ++
Sbjct: 523 EALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 186/340 (54%), Gaps = 5/340 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+ A+ G A+ F + + ++ + YN++L LV I LA ++++V
Sbjct: 141 AALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVA 200
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
P + +TY ++ G CK GM +A K+FD M + PN+ Y +++ C G+++
Sbjct: 201 AGCAP-NRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKID 259
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + + M ++GC P+E+TYNA + GLC GRV+EA + ++ GF + + ++
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GL +FD+ GY + ++E N++PDV Y ++I G + G+ ++A+S L M+ +G
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P F +N V ++L ++G+L+RA L +M Q + + + + +ICGLC +G + +
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC-KRGLVDEAMQ 438
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ D M G + Y+ L+ G+ EG +E + H+M
Sbjct: 439 IFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 7/305 (2%)
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRGYCKMGMIENAKKVF---DV 219
+ +L+R++S E F + +P S + ++ + G +A + F D
Sbjct: 107 VSLLLRLSS-HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDE 165
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+P YNT++ G + A N M+ GC PN TYN ++ GLC G +
Sbjct: 166 FQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGD 225
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A + +M G NV + +L LC GK D+AV L ++ + PD +Y ++
Sbjct: 226 ALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLS 285
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G CK+G+ +EA L ++ G + ++ + L + D K M + + P
Sbjct: 286 GLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP 345
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ V Y +I G C GR++D +D M + G D Y+ +LK C+ G++E +
Sbjct: 346 DVVLYTIMIRG-CAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTL 404
Query: 460 AHEMV 464
EM+
Sbjct: 405 RSEML 409
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 179/425 (42%), Gaps = 72/425 (16%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I+ + G ++ A+ + K+ + YN++L VL ++ A ++++ N
Sbjct: 353 MIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNN 412
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+V D +T T MI G CK G+++ A ++FD M P ++ YN +I+GF ++G LEEA
Sbjct: 413 LVL-DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA 471
Query: 246 K------------------------------------------------KCMNEMMNRGC 257
+ K + +++ G
Sbjct: 472 RMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGV 531
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +TYN +I GLC +D A L +++L G + T+ +++ GL + + A+
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMM 591
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL- 376
+N++++ +P + Y ++ C++ K +AI+L + P ++F +L
Sbjct: 592 LFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDY-----LPKKYNFPVESEVLA 646
Query: 377 -----VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+E+G LD + L ++ Q + Y + GLC + R D + +
Sbjct: 647 NAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVR-RTDDALRIFHTLQEF 705
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK--------GRLLKLKNFLTRVVDA 483
G ++ + L+ C + N+ + I ++K RLL+ R DA
Sbjct: 706 GIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDA 765
Query: 484 LLLMW 488
L W
Sbjct: 766 QALAW 770
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 170/402 (42%), Gaps = 60/402 (14%)
Query: 92 TPCYTAITDVLLSHSLISIAASL----LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
T CY + VL H + A +L L+N+ L + +I RG V A+ F
Sbjct: 382 TFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFD 441
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI-------------VKENVVPPDV 194
+ + + +YN+L+ R ++ A FH++ + N V D
Sbjct: 442 EMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVR-DS 500
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
+ ++ C+ G + A K+ + V P+++ YNT+ING CK L+ A + E
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
+ +G P+E+TY +I GL R ++A ML + +G ++S + SM++ LC + K
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKK 620
Query: 312 FDQAVGYLRNVMEANMNPDVKS------------------------------------YE 335
QA+ + + N V+S Y
Sbjct: 621 LSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYT 680
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI-LLLKQMPQ 394
+ + G C++ ++D+A+ + ++ G+ T + L + L+ A+ ++L + +
Sbjct: 681 IWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSK 740
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
L V N ++ LC+ R QD + L RM G+++D
Sbjct: 741 SIILSQPVG-NRLLRWLCICY-RRQDAQALAWRMHLVGYDMD 780
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
L + A + ++ ++ G+ +A+ M +PT F +N + + LV+
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
+G + A+ L +M C PN +YN ++ GLC +G D + D M+ G +
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLC-KQGMAGDALKMFDEMLDRGIMPNVK 243
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+Y+ LL C G ++ +Q+ M K
Sbjct: 244 IYTVLLSSLCNAGKIDEAVQLLGSMKDK 271
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 85/220 (38%), Gaps = 3/220 (1%)
Query: 258 RPNELTYNAMIYGLCINGRVDEAKM-LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
R L +A+ L ++ DEA +A R G + S +++ G+ AV
Sbjct: 98 RSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAV 157
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ E P Y ++ G A++L M A G P ++N + L
Sbjct: 158 QAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGL 217
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ G A+ + +M +PN Y ++ LC A G++ + L+ M G D
Sbjct: 218 CKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNA-GKIDEAVQLLGSMKDKGCLPD 276
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
Y+ L G C+ G V Q M+ G L LK +
Sbjct: 277 EVTYNAFLSGLCKVGRVNEAFQ-RLVMLQDGGFALGLKGY 315
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 186/340 (54%), Gaps = 5/340 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+ A+ G A+ F + + ++ + YN++L LV I LA ++++V
Sbjct: 141 AALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVA 200
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
P + +TY ++ G CK GM +A K+FD M + PN+ Y +++ C G+++
Sbjct: 201 AGCAP-NRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKID 259
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + + M ++GC P+E+TYNA + GLC GRV+EA + ++ GF + + ++
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GL +FD+ GY + ++E N++PDV Y ++I G + G+ ++A+S L M+ +G
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P F +N V ++L ++G+L+RA L +M Q + + + + +ICGLC +G + +
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC-KRGLVDEAMQ 438
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ D M G + Y+ L+ G+ EG +E + H+M
Sbjct: 439 IFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 7/305 (2%)
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRGYCKMGMIENAKKVF---DV 219
+ +L+R++S E F + +P S + ++ + G +A + F D
Sbjct: 107 VSLLLRLSS-HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDE 165
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+P YNT++ G + A N M+ GC PN TYN ++ GLC G +
Sbjct: 166 FQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGD 225
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A + +M G NV + +L LC GK D+AV L ++ + PD +Y ++
Sbjct: 226 ALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLS 285
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G CK+G+ +EA L ++ G + ++ + L + D K M + + P
Sbjct: 286 GLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP 345
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ V Y +I G C GR++D +D M + G D Y+ +LK C+ G++E +
Sbjct: 346 DVVLYTIMIRG-CAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTL 404
Query: 460 AHEMV 464
EM+
Sbjct: 405 RSEML 409
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 183/428 (42%), Gaps = 78/428 (18%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I+ + G ++ A+ + K+ + YN++L VL ++ A ++++ N
Sbjct: 353 MIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNN 412
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+V D +T T MI G CK G+++ A ++FD M P ++ YN +I+GF ++G LEEA
Sbjct: 413 LVL-DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA 471
Query: 246 K------------------------------------------------KCMNEMMNRGC 257
+ K + +++ G
Sbjct: 472 RMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGV 531
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +TYN +I GLC +D A L +++L G + T+ +++ GL + + A+
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMM 591
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL- 376
+N++++ +P + Y ++ C++ K +AI+L + P ++F +L
Sbjct: 592 LFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDY-----LPKKYNFPVESEVLA 646
Query: 377 -----VENGELDRAILLLKQMPQMDCLPNFVS---YNTIICGLCMAKGRMQDVEDLVDRM 428
+E+G LD + +++ ++D ++S Y + GLC + R D + +
Sbjct: 647 NAHKEIEDGSLDDGV---RELIKIDQEYGYISSNPYTIWLIGLCQVR-RTDDALRIFHTL 702
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK--------GRLLKLKNFLTRV 480
G ++ + L+ C + N+ + I ++K RLL+ R
Sbjct: 703 QEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRR 762
Query: 481 VDALLLMW 488
DA L W
Sbjct: 763 QDAQALAW 770
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 170/402 (42%), Gaps = 60/402 (14%)
Query: 92 TPCYTAITDVLLSHSLISIAASL----LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
T CY + VL H + A +L L+N+ L + +I RG V A+ F
Sbjct: 382 TFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFD 441
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI-------------VKENVVPPDV 194
+ + + +YN+L+ R ++ A FH++ + N V D
Sbjct: 442 EMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVC-DS 500
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
+ ++ C+ G + A K+ + V P+++ YNT+ING CK L+ A + E
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
+ +G P+E+TY +I GL R ++A ML + +G ++S + SM++ LC + K
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKK 620
Query: 312 FDQAVGYLRNVMEANMNPDVKS------------------------------------YE 335
QA+ + + N V+S Y
Sbjct: 621 LSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYT 680
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI-LLLKQMPQ 394
+ + G C++ ++D+A+ + ++ G+ T + L + L+ A+ ++L + +
Sbjct: 681 IWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSK 740
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
L V N ++ LC+ R QD + L RM G+++D
Sbjct: 741 SIILSQPVG-NRLLRWLCICY-RRQDAQALAWRMHLVGYDMD 780
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
L + A + ++ ++ G+ +A+ M +PT F +N + + LV+
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
+G + A+ L +M C PN +YN ++ GLC +G D + D M+ G +
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLC-KQGMAGDALKMFDEMLDRGIMPNVK 243
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+Y+ LL C G ++ +Q+ M K
Sbjct: 244 IYTVLLSSLCNAGKIDEAVQLLGSMKDK 271
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 85/220 (38%), Gaps = 3/220 (1%)
Query: 258 RPNELTYNAMIYGLCINGRVDEAKM-LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
R L +A+ L ++ DEA +A R G + S +++ G+ AV
Sbjct: 98 RSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAV 157
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ E P Y ++ G A++L M A G P ++N + L
Sbjct: 158 QAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGL 217
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ G A+ + +M +PN Y ++ LC A G++ + L+ M G D
Sbjct: 218 CKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNA-GKIDEAVQLLGSMKDKGCLPD 276
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
Y+ L G C+ G V Q M+ G L LK +
Sbjct: 277 EVTYNAFLSGLCKVGRVNEAFQ-RLVMLQDGGFALGLKGY 315
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 186/340 (54%), Gaps = 5/340 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+ A+ G A+ F + + ++ + YN++L LV I LA ++++V
Sbjct: 141 AALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVA 200
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
P + +TY ++ G CK GM +A K+FD M + PN+ Y +++ C G+++
Sbjct: 201 AGCAP-NRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKID 259
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + + M ++GC P+E+TYNA + GLC GRV+EA + ++ GF + + ++
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GL +FD+ GY + ++E N++PDV Y ++I G + G+ ++A+S L M+ +G
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P F +N V ++L ++G+L+RA L +M Q + + + + +ICGLC +G + +
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC-KRGLVDEAMQ 438
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ D M G + Y+ L+ G+ EG +E + H+M
Sbjct: 439 IFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 7/305 (2%)
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRGYCKMGMIENAKKVF---DV 219
+ +L+R++S E F + +P S + ++ + G +A + F D
Sbjct: 107 VSLLLRLSS-HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDE 165
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+P YNT++ G + A N M+ GC PN TYN ++ GLC G +
Sbjct: 166 FQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGD 225
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A + +M G NV + +L LC GK D+AV L ++ + PD +Y ++
Sbjct: 226 ALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLS 285
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G CK+G+ +EA L ++ G + ++ + L + D K M + + P
Sbjct: 286 GLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP 345
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ V Y +I G C GR++D +D M + G D Y+ +LK C+ G++E +
Sbjct: 346 DVVLYTIMIRG-CAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTL 404
Query: 460 AHEMV 464
EM+
Sbjct: 405 RSEML 409
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 183/428 (42%), Gaps = 78/428 (18%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I+ + G ++ A+ + K+ + YN++L VL ++ A ++++ N
Sbjct: 353 MIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNN 412
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+V D +T T MI G CK G+++ A ++FD M P ++ YN +I+GF ++G LEEA
Sbjct: 413 LVL-DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA 471
Query: 246 K------------------------------------------------KCMNEMMNRGC 257
+ K + +++ G
Sbjct: 472 RMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGV 531
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +TYN +I GLC +D A L +++L G + T+ +++ GL + + A+
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMM 591
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL- 376
+N++++ +P + Y ++ C++ K +AI+L + P ++F +L
Sbjct: 592 LFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDY-----LPKKYNFPVESEVLA 646
Query: 377 -----VENGELDRAILLLKQMPQMDCLPNFVS---YNTIICGLCMAKGRMQDVEDLVDRM 428
+E+G LD + +++ ++D ++S Y + GLC + R D + +
Sbjct: 647 NAHKEIEDGSLDDGV---RELIKIDQEYGYISSNPYTIWLIGLCQVR-RTDDALRIFHTL 702
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK--------GRLLKLKNFLTRV 480
G ++ + L+ C + N+ + I ++K RLL+ R
Sbjct: 703 QEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRR 762
Query: 481 VDALLLMW 488
DA L W
Sbjct: 763 QDAQALAW 770
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 170/402 (42%), Gaps = 60/402 (14%)
Query: 92 TPCYTAITDVLLSHSLISIAASL----LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
T CY + VL H + A +L L+N+ L + +I RG V A+ F
Sbjct: 382 TFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFD 441
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI-------------VKENVVPPDV 194
+ + + +YN+L+ R ++ A FH++ + N V D
Sbjct: 442 EMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVC-DS 500
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
+ ++ C+ G + A K+ + V P+++ YNT+ING CK L+ A + E
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
+ +G P+E+TY +I GL R ++A ML + +G ++S + SM++ LC + K
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKK 620
Query: 312 FDQAVGYLRNVMEANMNPDVKS------------------------------------YE 335
QA+ + + N V+S Y
Sbjct: 621 LSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYT 680
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI-LLLKQMPQ 394
+ + G C++ ++D+A+ + ++ G+ T + L + L+ A+ ++L + +
Sbjct: 681 IWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSK 740
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
L V N ++ LC+ R QD + L RM G+++D
Sbjct: 741 SIILSQPVG-NRLLRWLCICY-RRQDAQALAWRMHLVGYDMD 780
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
L + A + ++ ++ G++ +A+ M +PT F +N + + LV+
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
+G + A+ L +M C PN +YN ++ GLC +G D + D M+ G +
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLC-KQGMAGDALKMFDEMLDRGIMPNVK 243
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+Y+ LL C G ++ +Q+ M K
Sbjct: 244 IYTVLLSSLCNAGKIDEAVQLLGSMKDK 271
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 85/220 (38%), Gaps = 3/220 (1%)
Query: 258 RPNELTYNAMIYGLCINGRVDEAKM-LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
R L +A+ L ++ DEA +A R G + S +++ G+ AV
Sbjct: 98 RSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAV 157
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ E P Y ++ G A++L M A G P ++N + L
Sbjct: 158 QAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGL 217
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ G A+ + +M +PN Y ++ LC A G++ + L+ M G D
Sbjct: 218 CKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNA-GKIDEAVQLLGSMKDKGCLPD 276
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
Y+ L G C+ G V Q M+ G L LK +
Sbjct: 277 EVTYNAFLSGLCKVGRVNEAFQ-RLVMLQDGGFALGLKGY 315
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 223/455 (49%), Gaps = 18/455 (3%)
Query: 15 PD---QSILVTSITSVIQ--RLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPY 69
PD ++ LVTSI I+ RL+ + S NI + LGS+ V V+
Sbjct: 42 PDFVRRADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSH-VAAVLRSLKVTG 100
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSH----SLISIAASLLKNSNKLSDFF 125
A+ FF WA + H Y + ++L++ +I +LK + F
Sbjct: 101 TAISFFRWAGEQA----GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFS 156
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ LI+++ A+ F K+ L+++ L+ L + + A E FH+++
Sbjct: 157 FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM 216
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
VPPD + +T M+R K ++ A++VF M P+ +AYNTMI+G K G
Sbjct: 217 AMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHA 276
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+EA K ++ M+ + C P E+TY ++ LC G ++ A+ L M +GF+ N + S+
Sbjct: 277 QEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSL 336
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G G+ +A ++EA PDV ++ V+I+G CK G ++A +EM G
Sbjct: 337 IHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGC 396
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KP V ++ + + L + G + A ++K M C P+ V+Y ++ G C GR+ +
Sbjct: 397 KPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL-GRLDEAA 455
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
L+D + + + + +YS L+KG C+ G+VEN +
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 165/351 (47%), Gaps = 45/351 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y L+ L + +++ AEE F + P V YT++I G+ K G ++ A +FD
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSV-IYTSLIHGFAKSGRMKEACSLFDE 355
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +P+++ + MI+G CK G E+A K EMM GC+PN +TY +I GL GR
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 277 VDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
V A +M M +G F D+V T+ +L G C +G+ D+A L + + + +P+++ Y
Sbjct: 416 VANAFRIMKGMIAHGCFPDSV-TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYS 474
Query: 336 V------------------------------------VINGFCKIGKSDEAISLLKEMRA 359
+I G CK G+ DEA + + M +
Sbjct: 475 SLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVS 534
Query: 360 RGLKPTVFSFNAVFRILVENGE--LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
G KP ++N + L + E ++RA LL + + LP+ V+Y + GLC G
Sbjct: 535 EGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKI-GE 593
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ +++ G N D Y+ L G C +G V+ + + EMV + G
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 160/382 (41%), Gaps = 78/382 (20%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y SL+ + +K A F ++V E PDV T+T MI G CK G E A K F+ M
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMV-EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
KPN++ Y T+I G K G + A + M M+ GC P+ +TY ++ G C GR+
Sbjct: 392 MRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLC------------------------------ 307
DEA L+ ++ N+ + S++KGLC
Sbjct: 452 DEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCS 511
Query: 308 ------VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC------------------- 342
G+ D+A + ++ PD +Y ++ING C
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM 571
Query: 343 ------------------KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
KIG+ D A+ +L+E +RG V ++ A+ L G++DR
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A+ L ++M + P+ +Y II GL K +++D D MI G Y+ L+
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKGK-KLEDACKFFDEMIGKGQKPTVATYTALV 690
Query: 445 KGYCEEGNVENVMQIAHEMVTK 466
+ C GNV+ M+ +
Sbjct: 691 QALCHAGNVDEAFHRFEGMLAR 712
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 158/346 (45%), Gaps = 13/346 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK-LAEEFFHQ--IV 185
L+ + G + A + + + L Y+SL+ L S++ ++ F Q
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAA 500
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE- 241
EN+ P ++I G CK G ++ A ++F M KP+ YN +ING C+ E
Sbjct: 501 AENLDP---GLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSREN 557
Query: 242 -LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+E A ++++ G P+ +TY + GLC G VD A ++ + G+ +V +
Sbjct: 558 RVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYT 617
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ GLC G+ D+AV + ++ PD +Y +ING K K ++A EM +
Sbjct: 618 ALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGK 677
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQM-PQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G KPTV ++ A+ + L G +D A + M + + + + + Y+ +I G C A ++
Sbjct: 678 GQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKAL-KVD 736
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
L + MI G+ + L G G E ++ EM
Sbjct: 737 AALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAA 782
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 133/258 (51%), Gaps = 7/258 (2%)
Query: 160 SYNSLLGVLVRV--NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+YN L+ L R N ++ A H + +P D TYT + G CK+G ++ A K+
Sbjct: 543 TYNILINGLCRSRENRVERAFALLHDLEMVGYLP-DAVTYTPLCIGLCKIGEVDRAVKML 601
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ + + +++AY + G C +G+++ A EM+ +G P+ Y +I GL
Sbjct: 602 EEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKG 661
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM-EANMNPDVKS 333
++++A +M G K V+T+ ++++ LC G D+A ++ + V
Sbjct: 662 KKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMI 721
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y+ +I+GFCK K D A+ L ++M +RG PT + ++F LV +G+ ++A LL++M
Sbjct: 722 YDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA 781
Query: 394 QMDCLPNFVSYNTIICGL 411
P+ ++ I+ GL
Sbjct: 782 AGGSPPHAATFTAILDGL 799
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCM 249
DV YT + G C G ++ A +F M + P+ AY +ING K +LE+A K
Sbjct: 612 DVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFF 671
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEA----KMLMAKMRLNGFKDNVSTHKSMLKG 305
+EM+ +G +P TY A++ LC G VDEA + ++A+ L G +V + +++ G
Sbjct: 672 DEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVG---SVMIYDALIHG 728
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C K D A+ +++ P + + +G + GK+++A LL+EM A G P
Sbjct: 729 FCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPH 788
Query: 366 VFSFNAVFRILVENGELDRAILLLKQ 391
+F A+ L ++ E + + L+++
Sbjct: 789 AATFTAILDGLRKSDESGKLLKLVQE 814
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 8/223 (3%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G V A+ +A A + +Y +L L + A F ++V++ P D +
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP-DAAA 650
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y +I G K +E+A K FD M KP + Y ++ C G ++EA M+
Sbjct: 651 YCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGML 710
Query: 254 NRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
RG + + Y+A+I+G C +VD A L M G T S+ GL GK
Sbjct: 711 ARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKT 770
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
++A L+ + P ++ +++G + KSDE+ LLK
Sbjct: 771 EKAQELLQEMAAGGSPPHAATFTAILDG---LRKSDESGKLLK 810
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 86/176 (48%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
GF+ +V T+ ++ L + Q +++A + P+ S+ ++I F + ++D+A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
++ + M+ + KP + +F + L + G ++A + +M M +P + +T +
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ R+++ ++ +M + G D Y+ ++ G + G+ + +++ M+ K
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 179/328 (54%), Gaps = 10/328 (3%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK------ENVVPPDVSTYTT 199
F K +E + +YN+LL L R ++ A F +++ ++ P+V TY+
Sbjct: 137 FEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSV 196
Query: 200 MIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
+I G CK + A ++ + M + P+++ Y +++G CK+ ++ A + + EM++ G
Sbjct: 197 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 256
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C PN +TYN++++GLC RV +A LM M G NV T+ +++ GLC VG+ A
Sbjct: 257 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 316
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
L ++++ PD+ Y ++ING CK + DE+I+LL+ + G+KP V ++++V L
Sbjct: 317 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 376
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ LD A LL + C P+ + Y+T+I GLC A G++ + DL + M G + D
Sbjct: 377 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA-GKVDEAFDLYEVMAGDGCDAD 435
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMV 464
YS L+ G C+ G V+ + MV
Sbjct: 436 VVTYSTLIDGLCKAGRVDEAHLLLARMV 463
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 197/385 (51%), Gaps = 20/385 (5%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQI 152
Y+ + D L + +S A LL++ + S I+ I G K A W + +
Sbjct: 194 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 253
Query: 153 ENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ G L +YNSLL L R + A + P +V TY T+I G CK+G +
Sbjct: 254 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTP-NVVTYGTLIDGLCKVGRV 312
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
++A + M K P+L+ YN +ING CK +++E+ + ++ G +P+ +TY+++
Sbjct: 313 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 372
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
IYGLC + R+DEA L+ ++ G +V + +++ GLC GK D+A +
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ DV +Y +I+G CK G+ DEA LL M G P+ ++N++ + L + LD AI
Sbjct: 433 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 492
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV-------DRMIRSGHN-LDFTM 439
L+++M + +C P+ V+YN +I G+C RM+ V+ V R + +G LD
Sbjct: 493 LVEEMERSNCAPSAVTYNILIHGMC----RMERVDSAVVLLEQAKARCVAAGGTALDTIA 548
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMV 464
YS L+ G C+ G V + EM+
Sbjct: 549 YSSLIDGLCKAGRVAEALDYFQEMI 573
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 171/321 (53%), Gaps = 12/321 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y +LL R I A+ F ++ +N+V P+V + +I G CK +A + F
Sbjct: 9 VYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLV-PNVFLCSILIDGLCKAKRSIDALRCF 67
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + + + Y +++G K+ L++A ++EM + GC PN +TYN++I GLC N
Sbjct: 68 RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV-------MEANM 327
D A+ L M+ ++ T+ ++L GL GK ++A+ + + M+
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+P+V +Y V+I+G CK + +A+ LL+ M+ARG P V ++ + L + ++ A
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+L++M C+PN V+YN+++ GLC A+ R+ D L+ M G + Y L+ G
Sbjct: 248 VLREMLDAGCVPNLVTYNSLLHGLCRAR-RVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306
Query: 448 CEEGNVENVMQIAHEMVTKKG 468
C+ G V++ + +M+ K G
Sbjct: 307 CKVGRVKDACAMLADMIDKGG 327
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 158/309 (51%), Gaps = 12/309 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +LL L + + A H++ +++ P+V TY ++I G CK + A+++F+ M
Sbjct: 82 YTALLSGLWKEKRLDQALAILHEM-RDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM 140
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR-------GCRPNELTYNAMIYG 270
P+++ YNT+++G + G+LE A EM++R C PN +TY+ +I G
Sbjct: 141 KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDG 200
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC RV +A L+ M+ G +V T+ ++ GLC K A LR +++A P+
Sbjct: 201 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 260
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ +Y +++G C+ + +A++L+++M RG P V ++ + L + G + A +L
Sbjct: 261 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLA 320
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
M P+ + YN +I GLC A + + L+ R + G D YS ++ G C
Sbjct: 321 DMIDKGGTPDLMIYNMLINGLCKADQVDESIA-LLRRAVSGGIKPDVVTYSSVIYGLCRS 379
Query: 451 GNVENVMQI 459
++ ++
Sbjct: 380 NRLDEACRL 388
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 166/315 (52%), Gaps = 13/315 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI G VK A A I+ G L YN L+ L + + + + + V
Sbjct: 302 LIDGLCKVGRVKDACAML--ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 359
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ PDV TY+++I G C+ ++ A ++ + + P+++ Y+T+I+G CK G+++
Sbjct: 360 GGI-KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVD 418
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA M GC + +TY+ +I GLC GRVDEA +L+A+M G + T+ S++
Sbjct: 419 EAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 478
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR--- 360
KGLC + D+A+ + + +N P +Y ++I+G C++ + D A+ LL++ +AR
Sbjct: 479 KGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVA 538
Query: 361 --GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
G +++++ L + G + A+ ++M +P+ ++Y+ ++ GL +K
Sbjct: 539 AGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLH 598
Query: 419 QDVEDLVDRMIRSGH 433
+ ++D+M++ G+
Sbjct: 599 ELRHLVLDQMVQLGY 613
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 152/308 (49%), Gaps = 26/308 (8%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P++ Y ++ GFC+ GE+++A++C +EM ++ PN + +I GLC R +A
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
M+ +G + + ++L GL + DQA+ L + + P+V +Y +I+G C
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM-----PQMD- 396
K + D A L + M++ P++ ++N + L G+L+RA+ L ++M MD
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 397 -CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C PN ++Y+ +I GLC A Q VE L++ M G + D Y+ L+ G C+E V
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVE-LLESMKARGCSPDVITYTILVDGLCKESKVAA 244
Query: 456 VMQIAHEMVTKKG--RLLKLKNFL------TRVVDALLLMW----------IVTGGSWIS 497
++ EM+ L+ + L RV DAL LM +VT G+ I
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304
Query: 498 RFVFVHQV 505
V +V
Sbjct: 305 GLCKVGRV 312
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 8/217 (3%)
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C+P+ TY A++ G C G +D+A+ +MR NV ++ GLC + A+
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
R + + + D Y +++G K + D+A+++L EMR G +P V ++N++ L
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI-RSGHNL 435
+N E DRA L + M ++C P+ V+YNT++ GL G+++ L M+ R H++
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGL-FRTGKLERAMALFQEMLDRRSHDM 183
Query: 436 D------FTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D YS L+ G C+ V +++ M +
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKAR 220
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI G V A + ++ +YNSL+ L +N + A E ++ +
Sbjct: 440 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMER 499
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP--------NLLAYNTMINGFCK 238
N P V TY +I G C+M +++A + + + + +AY+++I+G CK
Sbjct: 500 SNCAPSAV-TYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCK 558
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
G + EA EM++ G P+ +TY+ ++ GL
Sbjct: 559 AGRVAEALDYFQEMIDNGVIPDHITYSILLEGL 591
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 220/450 (48%), Gaps = 65/450 (14%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
IV +V+ + AL FF WA P + HT + ++ VL+ K
Sbjct: 45 IVGRVVNSLKDAKLALAFFRWAPASIPG---FSHTAFSWNSLLQVLVR----------CK 91
Query: 117 NSNKLSDFFISKL--------------IKAYGDRGNVKAAIFWFHQAK------------ 150
+ D F S+L I + + G++ AA+ + K
Sbjct: 92 KHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHT 151
Query: 151 -----------------QIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVV 190
+ + C + +Y +L+ R ++ A + ++ +E
Sbjct: 152 PIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEM-RERGC 210
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKK 247
PP++ TY ++ CK+ M+ A+ V M PN++ +N++++GFCK+G +++A+K
Sbjct: 211 PPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARK 270
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ M+ +G RPN +TY+A+I GLC + + EAK ++ +M+ G + T+ +++ GLC
Sbjct: 271 LLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLC 330
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
K ++A LR + + PDV Y +I+ FCK GK EA L+EMR + P V
Sbjct: 331 KADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVV 390
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQM-DCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++N V L + G++ A ++L+QM + D LP+ V+Y+T+I GLC + + + + L+D
Sbjct: 391 TYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSD-MLVEAQKLLD 449
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
RM ++G N D Y+ ++ G C+ G +E
Sbjct: 450 RMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 200/381 (52%), Gaps = 16/381 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAA--IFWFHQ 148
Y + D L S++ A ++K + + L+ + RGNV A +
Sbjct: 217 YNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMV 276
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
AK + + +Y++L+ L + A+E ++ K V PD TY+ +I G CK
Sbjct: 277 AKGMRPN--VVTYSALIDGLCKSQKFLEAKEVLEEM-KTRGVTPDAFTYSALIHGLCKAD 333
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
IE A+++ M P+++ Y+++I+ FCK G+L EA+K + EM + P+ +TYN
Sbjct: 334 KIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYN 393
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+I GLC G++ EA++++ +M+ +G +V T+ +++ GLC +A L + +
Sbjct: 394 TVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK 453
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
A NPDV +Y +I+G CK G+ +EA LL+ M+ G P V ++ + L + ++D
Sbjct: 454 AGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDE 513
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI--RSGHNLDFTMYSC 442
A ++++M C PN V+YNT++ GLC++ GR+++ + LV RM R+ + D Y
Sbjct: 514 AERVMEEMRNAGCPPNLVTYNTMVNGLCVS-GRIKEAQQLVQRMKDGRAECSPDAATYRT 572
Query: 443 LLKGYCEEGNVENVMQIAHEM 463
++ V+ Q+ +M
Sbjct: 573 IVNALMSSDLVQEAEQLLEQM 593
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 142/274 (51%), Gaps = 9/274 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y+A+ L I A +L+ S D + S +I A+ G + A + +
Sbjct: 322 YSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 381
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +YN+++ L ++ I A+ Q+ + V PDV TY+T+I G CK M+
Sbjct: 382 KQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDML 441
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A+K+ D M P+++ Y T+I+G CK G LEEA+ + M GC PN +TY +
Sbjct: 442 VEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTL 501
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME--A 325
I GLC +VDEA+ +M +MR G N+ T+ +M+ GLCV G+ +A ++ + + A
Sbjct: 502 ISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRA 561
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+PD +Y ++N EA LL++M++
Sbjct: 562 ECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 119/240 (49%), Gaps = 4/240 (1%)
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
++N+++ + + EA + C P+ +YN +I G C G + A L+ +
Sbjct: 78 FSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEE 137
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M+ GF + TH ++ + G D A+ +LR++ +P+V +Y +I F + K
Sbjct: 138 MKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKK 194
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
+EA+ LL+EMR RG P + ++N + L + + A ++K+M + PN +++N+
Sbjct: 195 LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 254
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ G C +G + D L+ M+ G + YS L+ G C+ ++ EM T+
Sbjct: 255 LVDGFC-KRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTR 313
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 165/284 (58%), Gaps = 1/284 (0%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGEL 242
+I++ + PDV TY MI GYCK G I NA V D M+V P+++ YNT++ C G+L
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKL 220
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A + ++ M+ R C P+ +TY +I C + V A L+ +MR G +V T+ +
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G+C G+ D+A+ +L ++ + P+V ++ +++ C G+ +A LL +M +G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P+V +FN + L G L RAI +L++MPQ C PN +SYN ++ G C K +M
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK-KMDRAI 399
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ ++RM+ G D Y+ +L C++G VE+ ++I +++ +K
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 168/306 (54%), Gaps = 5/306 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L L +K A E ++++ + P DV TYT +I C+ + +A K+ D
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP-DVITYTILIEATCRDSGVGHAMKLLDE 264
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+++ YN ++NG CK+G L+EA K +N+M + GC+PN +T+N ++ +C GR
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+A+ L+A M GF +V T ++ LC G +A+ L + + P+ SY
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++GFCK K D AI L+ M +RG P + ++N + L ++G+++ A+ +L Q+
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C P ++YNT+I GL A G+ L+D M D YS L+ G EG V+
Sbjct: 445 CSPVLITYNTVIDGLAKA-GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 457 MQIAHE 462
++ HE
Sbjct: 504 IKFFHE 509
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 167/310 (53%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ + + + A +F + + P+V T+ ++R C G +A+K+
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGC-QPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ +N +IN C+KG L A + +M GC+PN L+YN +++G C +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A + +M G ++ T+ +ML LC GK + AV L + +P + +Y
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G K GK+ +AI LL EMRA+ LKP +++++ L G++D AI + +M
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V++N+I+ GLC ++ + ++ LV MI G + T Y+ L++G EG +
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLV-FMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 457 MQIAHEMVTK 466
+++ +E+ K
Sbjct: 574 LELLNELCNK 583
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 138/266 (51%), Gaps = 7/266 (2%)
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+R + G +E K + M P+++ T+I GFC+ G+ +A K + + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +TYN MI G C G ++ A ++ +M ++ +V T+ ++L+ LC GK QA+
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAME 225
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L +++ + PDV +Y ++I C+ A+ LL EMR RG P V ++N + +
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G LD AI L MP C PN +++N I+ +C + GR D E L+ M+R G +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC-STGRWMDAEKLLADMLRKGFSPSV 344
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
++ L+ C +G + + I +M
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKM 370
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 113/206 (54%), Gaps = 4/206 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL + + A E+ ++V P D+ TY TM+ CK G +E+A ++ +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP-DIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
++ K P L+ YNT+I+G K G+ +A K ++EM + +P+ +TY++++ GL G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA + G + N T S++ GLC + D+A+ +L ++ P+ SY +
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 337 VINGFCKIGKSDEAISLLKEMRARGL 362
+I G G + EA+ LL E+ +GL
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGL 585
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN----SIKLAEEFFHQI 184
++ A G V+ A+ +Q L +YN+++ L + +IKL +E +
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGE 241
+K PD TY++++ G + G ++ A K F + M ++PN + +N+++ G CK +
Sbjct: 480 LK-----PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+ A + M+NRGC+PNE +Y +I GL G EA L+ ++
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 180/306 (58%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ + +V + A + F ++V + + PDV TY+ +I G+C +G +++A +F+ M
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGI-SPDVVTYSALISGFCILGKLKDAIDLFNKM 286
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+KP++ +N ++N FCK G+++E K + MM +G +PN +TYN+++ G C+ V
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
++AK + M G ++ ++ M+ G C + KFD+A+ + + N+ PDV +Y +
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K G+ A+ L+ +M RG+ P + ++N++ L + ++D+AI LL +
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGF 466
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ +Y+ +I GLC + G+++D + + ++ G+NLD Y+ +++G+C EG +
Sbjct: 467 QPDISTYSILIKGLCQS-GKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEAL 525
Query: 458 QIAHEM 463
+ +M
Sbjct: 526 ALLSKM 531
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 225/454 (49%), Gaps = 28/454 (6%)
Query: 21 VTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWA-- 78
V S+ RL +N +P P +F+ LGS + +K YH + + +
Sbjct: 66 VDDAVSLFNRLLRRNTTP------PAFEFNKILGSLVKSK-------HYHTVLYLSQKME 112
Query: 79 -SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRG 137
PN + C+ + + + S+ A +LK + L K +G
Sbjct: 113 FRGIKPNLVNCNILINCFCQLGLIPFA---FSVFAKILKMGYVPDTITFTTLSKGLCLKG 169
Query: 138 NVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
++ A F FH K + G SY +L+ L +V + A + Q V N+V P+V
Sbjct: 170 QIQQA-FLFHD-KVVALGFHFDQISYGTLIHGLCKVGETRAALDLL-QRVDGNLVQPNVV 226
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
Y T+I CK+ ++ A +F M K P+++ Y+ +I+GFC G+L++A N+M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ +P+ T+N ++ C +G++ E K + M G K N T+ S++ G C+V +
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
++A + + +NPD++SY ++INGFCKI K DEA++L KEM + + P V +++++
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L ++G + A+ L+ QM PN +YN+I+ LC ++ L+ + G
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTH-QVDKAIALLTKFKDKG 465
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D + YS L+KG C+ G +E+ ++ +++ K
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVK 499
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 5/314 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + G +K AI F++ +Y++N L+ + +K + F ++K
Sbjct: 264 SALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMK 323
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + P+ TY +++ GYC + + AK +F+ M V P++ +Y+ MINGFCK + +
Sbjct: 324 QGI-KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFD 382
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA EM + P+ +TY+++I GL +GR+ A L+ +M G N+ T+ S+L
Sbjct: 383 EAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSIL 442
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC + D+A+ L + PD+ +Y ++I G C+ GK ++A + +++ +G
Sbjct: 443 DALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYN 502
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
V+++ + + G + A+ LL +M C+P+ +Y II L K E
Sbjct: 503 LDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL-FKKDENDMAEK 561
Query: 424 LVDRMIRSGHNLDF 437
L+ MI G L+F
Sbjct: 562 LLREMIARGLPLNF 575
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 162/344 (47%), Gaps = 38/344 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS------------TYTTMI------ 201
SY+S N + A F+++++ N PP Y T++
Sbjct: 52 SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111
Query: 202 --RG--------------YCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGEL 242
RG +C++G+I A VF M P+ + + T+ G C KG++
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQI 171
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A ++++ G ++++Y +I+GLC G A L+ ++ N + NV + ++
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ +C V ++A ++ ++PDV +Y +I+GFC +GK +AI L +M +
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI 291
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KP V++FN + ++G++ + M + PNFV+YN+++ G C+ K + +
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK-EVNKAK 350
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + M + G N D YS ++ G+C+ + M + EM K
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK 394
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 1/242 (0%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
K N ++Y++ F ++++A N ++ R P +N ++ L +
Sbjct: 47 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L KM G K N+ ++ C +G A +++ PD ++ + G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
G+ +A ++ A G S+ + L + GE A+ LL+++ PN V
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
YNTII +C K + + DL M+ G + D YS L+ G+C G +++ + + ++
Sbjct: 227 MYNTIIDSMCKVK-LVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285
Query: 463 MV 464
M+
Sbjct: 286 MI 287
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 232/489 (47%), Gaps = 48/489 (9%)
Query: 16 DQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFF 75
D+ + S SV++R+ Q S + LD++ L IV KV+ +P AL FF
Sbjct: 55 DRWVGSDSPISVLERI-VQGASDEQALRVALDEYRGQLSPEIVGKVLQRLIDPGAALVFF 113
Query: 76 NWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN-------------SNKLS 122
WA + Y H C + +VL+ S A L ++ S +S
Sbjct: 114 EWAETRD----GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLIS 169
Query: 123 DFF-ISKLIKAYG--DRGNVKAAIFWFHQAKQIENGAC---------------------- 157
F K++ AY D N K K I G C
Sbjct: 170 GFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPD 229
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+YN+++ L + + + A ++V +N P+V +Y T++ G+CK +ENA +
Sbjct: 230 SVTYNTMINGLSKSDRLDDAIRLLEEMV-DNGFAPNVFSYNTVLHGFCKANRVENALWLL 288
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + P++++Y T+ING CK +++EA + M++M+ RGC+PN +TY ++ G C
Sbjct: 289 EQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRV 348
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D A L+ KM G++ N T+ +++ C ++A L+ +++ PD +Y
Sbjct: 349 GDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINY 408
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+GFCK GK EA LL++M RG +P V + + L + +D A LL+
Sbjct: 409 STIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIG 468
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
MDC P+ V+Y+ +I LC AK R+ + E +D M+++ D Y+ ++ G C+ +
Sbjct: 469 MDCAPDVVAYSILIHALCKAK-RLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIN 527
Query: 455 NVMQIAHEM 463
+ + M
Sbjct: 528 DAFLLFDRM 536
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 214/432 (49%), Gaps = 10/432 (2%)
Query: 42 SSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDV 101
+ L++F+ L + +V KV+ N AL FF+WA+ + Y+H T +
Sbjct: 798 AETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWAT----SQEGYNHDTYTCNCLLQA 853
Query: 102 LLSHSLISIAASLLKNSNKLSD--FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLY 159
LL A + +N S F + LI G++ A + + +
Sbjct: 854 LLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVI 913
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+N ++ L + A E F ++ + PPDV TY+T++ K G +++A ++ +
Sbjct: 914 LHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVED 973
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ Y+++++G CK G+L+EA + M GC PN +TYN +I G C GR
Sbjct: 974 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 1033
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEA L+ +M G + NV T+ +L C GK + A+G + ++E P++ +Y
Sbjct: 1034 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 1093
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++ FCK + + A LL M +G P V S+N V L + ++ +LLL+QM +
Sbjct: 1094 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 1153
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C+P+ V++NTII +C R+ +L + + SG + Y+ L+ G C+ +
Sbjct: 1154 CVPDIVTFNTIIDAMCKTY-RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 1212
Query: 457 MQIAHEMVTKKG 468
+ EM K+G
Sbjct: 1213 EYLLREMTRKQG 1224
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 198/381 (51%), Gaps = 12/381 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSDFFI--SKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ I D L+ + A L+++ S S + S L+ G + A +
Sbjct: 951 YSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 1010
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +YN+++ ++ I A ++V + P+V TYT ++ +CK G
Sbjct: 1011 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV-DGGCQPNVVTYTVLLDAFCKCGKA 1069
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
E+A + +VM K PNL YN++++ FCKK E+E A + ++ M+ +GC PN ++YN +
Sbjct: 1070 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 1129
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC +V E +L+ +M N ++ T +++ +C + D A + E+
Sbjct: 1130 IAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGC 1189
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAI 386
P++ +Y +++G CK + D+A LL+EM R +G P + ++N V L ++ +DRA
Sbjct: 1190 TPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAY 1249
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGR-MQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L QM P+ V+Y+ +I LC K R M + ++++ M+++G + Y L+
Sbjct: 1250 KLFLQMLSDGLAPDDVTYSIVISSLC--KWRFMDEANNVLELMLKNGFDPGAITYGTLID 1307
Query: 446 GYCEEGNVENVMQIAHEMVTK 466
G+C+ GN++ ++I +++K
Sbjct: 1308 GFCKTGNLDKALEILQLLLSK 1328
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 174/328 (53%), Gaps = 10/328 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++++ + ++ A + Q+++ PDV+ +T+I CK I++A+++ +
Sbjct: 407 NYSTIISGFCKAGKLREAHDLLEQMIRRGC-RPDVACLSTLIDALCKAAAIDSAQELLRM 465
Query: 220 ---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P+++AY+ +I+ CK L EA+ ++ M+ C P+ +TYN+++ GLC + R
Sbjct: 466 SIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRR 525
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+++A +L +MR G +V T+ ++ C D A L + EA PDV +Y
Sbjct: 526 INDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSA 585
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING CK G D+A + +EM G P + ++N + L + ++++A +L+ M +
Sbjct: 586 LINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQS 645
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C P+ ++Y +I GLC A R+++ ++ M G D Y LL+ + N+E V
Sbjct: 646 CTPDSITYTCLINGLCNAS-RLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELV 704
Query: 457 MQIAHEM-VTKKGRL----LKLKNFLTR 479
Q+ EM T++G+ +L F+ R
Sbjct: 705 EQLLKEMEATEEGQWNANGARLHRFVIR 732
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 168/310 (54%), Gaps = 6/310 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L++YNSLL + + + ++ A + ++++ VP +V +Y T+I G CK + +
Sbjct: 1088 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP-NVVSYNTVIAGLCKATKVHEGVLLL 1146
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M P+++ +NT+I+ CK ++ A + N + GC PN +TYN++++GLC +
Sbjct: 1147 EQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKS 1206
Query: 275 GRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
R D+A+ L+ +M R G ++ T+ +++ GLC + D+A ++ + PD +
Sbjct: 1207 RRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVT 1266
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +VI+ CK DEA ++L+ M G P ++ + + G LD+A+ +L+ +
Sbjct: 1267 YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL 1326
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
P+ V+++ I L +GR++ +L++ M+R+G D Y+ LLKG+C+
Sbjct: 1327 SKGSYPDVVTFSIFIDWL-SKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLT 1385
Query: 454 ENVMQIAHEM 463
E+ + + M
Sbjct: 1386 EDAVDLFEVM 1395
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 151/288 (52%), Gaps = 5/288 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N+++ + + + +A E F+ +++E+ P++ TY +++ G CK + A+ +
Sbjct: 1158 IVTFNTIIDAMCKTYRVDIAYELFN-LIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLL 1216
Query: 218 DVMTVK----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
MT K P+++ YNT+I+G CK ++ A K +M++ G P+++TY+ +I LC
Sbjct: 1217 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 1276
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+DEA ++ M NGF T+ +++ G C G D+A+ L+ ++ PDV +
Sbjct: 1277 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 1336
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+ + I+ K G+ +A LL+ M GL P ++N + + + + A+ L + M
Sbjct: 1337 FSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMR 1396
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
Q C P+ +Y T++ L K + ++ M+ +G L+ + S
Sbjct: 1397 QCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSS 1444
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 2/240 (0%)
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N ++N K + +A + + +TY+ +I G G++ A L +M
Sbjct: 130 NCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNR 189
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G K + HKS+L+GLC G+ AV + R M PD +Y +ING K + D+
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDAVLHFRE-MSKTCPPDSVTYNTMINGLSKSDRLDD 248
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
AI LL+EM G P VFS+N V + ++ A+ LL+QM C P+ VSY T+I
Sbjct: 249 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVIN 308
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
GLC ++ + ++D+MI+ G + Y L+ G+C G+++ +++ +M + R
Sbjct: 309 GLCKLD-QVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYR 367
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+G++ + +L L ++ QA R+ +E D +Y +I+GF + GK
Sbjct: 120 DGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILP 179
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A L EM +GLK ++ R L + G+ A+L ++M + C P+ V+YNT+I
Sbjct: 180 AYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMIN 238
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GL + R+ D L++ M+ +G + Y+ +L G+C+ VEN + + +MVT+
Sbjct: 239 GLSKSD-RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTR 294
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 154/398 (38%), Gaps = 62/398 (15%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI G V A F + L +YN+L+ L ++N ++ A E +I++
Sbjct: 584 SALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEML-EIMR 642
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ PD TYT +I G C +E A +V M K P+ + Y T++ K LE
Sbjct: 643 KQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLE 702
Query: 244 EAKKCMNEMMNRGCRPNELTYN-AMIYGLCINGRV------DEAKMLMAKMRLNGFKDNV 296
++ + EM + N A ++ I G V L ++ R+ KD
Sbjct: 703 LVEQLLKEM--EATEEGQWNANGARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQ 760
Query: 297 ST-----HKSMLKGLCVVGKFDQ----------AVGYLRNVME---ANMNPDV--KSYEV 336
H+ + + G F A Y +E + V K +
Sbjct: 761 GQFSPRPHQYRVTAVATQGGFHHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQG 820
Query: 337 VINGFCKIGKSDEAIS-----------------LLKEMRARG----------LKPTVFSF 369
V NG +G D A S LL+ R + P +F+F
Sbjct: 821 VRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTF 880
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ L G++ A LLK+MP+ N + +N +I GLC A+ ++ +L M
Sbjct: 881 TILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSAR-KLDSALELFKEME 939
Query: 430 RSGH-NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
SG D YS ++ + G V++ ++ +MV+K
Sbjct: 940 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSK 977
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 158/399 (39%), Gaps = 88/399 (22%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS---------------------- 195
+ +YN+++ L + + A + F Q++ + + P DV+
Sbjct: 1229 IITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLE 1288
Query: 196 ------------TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
TY T+I G+CK G ++ A ++ ++ K P+++ ++ I+ K+G
Sbjct: 1289 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRG 1348
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH- 299
L +A + + M+ G P+ +TYN ++ G C ++A L MR G + + +T+
Sbjct: 1349 RLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYT 1408
Query: 300 ---------KSMLKGLCVVGKFDQAVGY-----LRNVMEANMN--PDVKSYEVVINGFCK 343
KS L V K G+ L + +EA++ DV+ +++ F K
Sbjct: 1409 TLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGK 1468
Query: 344 IG-------------------------------KSDEAISLLKEMRARGLKPTVFSFNAV 372
G + ++A L + M G++P +F ++
Sbjct: 1469 CGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSL 1528
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ G LD A+ + + L V + + + L G + + EDL M+
Sbjct: 1529 LTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDL---MLGMP 1585
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLL 471
++CLL Y G+ E +++A T+ LL
Sbjct: 1586 CKPSAATWNCLLSAYKICGDFERALRVAELNPTQASYLL 1624
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 166/284 (58%), Gaps = 1/284 (0%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGEL 242
++++ + PDV TY MI GYCK G I NA V D M+V P+++ YNT++ C G+L
Sbjct: 161 EVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKL 220
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A + ++ M+ R C P+ +TY +I C + V +A L+ +MR G +V T+ +
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G+C G+ D+A+ +L ++ + P+V ++ +++ C G+ +A LL +M +G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P+V +FN + L G L RAI +L++MP+ C PN +SYN ++ G C K +M
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEK-KMDRAI 399
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ ++RM+ G D Y+ +L C++G VE+ ++I +++ +K
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 167/306 (54%), Gaps = 5/306 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L L +K A E ++++ + P DV TYT +I C+ + A K+ D
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP-DVITYTILIEATCRDSGVGQAMKLLDE 264
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+++ YN ++NG CK+G L+EA K +N+M + GC+PN +T+N ++ +C GR
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+A+ L+A M GF +V T ++ LC G +A+ L + + P+ SY
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNP 384
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++GFCK K D AI L+ M +RG P + ++N + L ++G+++ A+ +L Q+
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C P ++YNT+I GL A G+ L+D M D YS L+ G EG V+
Sbjct: 445 CSPVLITYNTVIDGLAKA-GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 457 MQIAHE 462
++ HE
Sbjct: 504 IKFFHE 509
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 165/310 (53%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ + + + A +F + + P+V T+ ++R C G +A+K+
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGC-QPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ +N +IN C+KG L A + +M GC+PN L+YN +++G C +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKK 394
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A + +M G ++ T+ +ML LC GK + AV L + +P + +Y
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G K GK+ +AI LL EMRA+ LKP +++++ L G++D AI + +M
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V++N+I+ GLC + + ++ LV MI G T Y+ L++G EG +
Sbjct: 515 VRPNAVTFNSIMLGLCKTRQTDRAIDFLV-YMINRGCKPTETSYTILIEGLAYEGMAKEA 573
Query: 457 MQIAHEMVTK 466
+++ +E+ K
Sbjct: 574 LELLNELCNK 583
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 139/266 (52%), Gaps = 7/266 (2%)
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+R + G +E K + M P+++ T+I GFC+ G+ +A K + + G
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +TYN MI G C G ++ A ++ +M ++ +V T+ ++L+ LC GK QA+
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAME 225
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L +++ + PDV +Y ++I C+ +A+ LL EMR RG P V ++N + +
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G LD AI L MP C PN +++N I+ +C + GR D E L+ M+R G +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC-STGRWMDAEKLLADMLRKGFSPSV 344
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
++ L+ C +G + + I +M
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKM 370
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 112/206 (54%), Gaps = 4/206 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL + + A E+ ++V P D+ TY TM+ CK G +E+A ++ +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP-DIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
++ K P L+ YNT+I+G K G+ +A K ++EM + +P+ +TY++++ GL G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA + G + N T S++ GLC + D+A+ +L ++ P SY +
Sbjct: 500 VDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTI 559
Query: 337 VINGFCKIGKSDEAISLLKEMRARGL 362
+I G G + EA+ LL E+ +GL
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGL 585
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN----SIKLAEEFFHQI 184
++ A G V+ A+ +Q L +YN+++ L + +IKL +E +
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGE 241
+K PD TY++++ G + G ++ A K F + M V+PN + +N+++ G CK +
Sbjct: 480 LK-----PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQ 534
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+ A + M+NRGC+P E +Y +I GL G EA L+ ++
Sbjct: 535 TDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 213/446 (47%), Gaps = 59/446 (13%)
Query: 66 TNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN-------- 117
++P AL FF+WAS + H Y + + LL I +LKN
Sbjct: 2 SDPDAALRFFHWASKQQ----GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITP 57
Query: 118 ------------------------------SNKLSD-----FFISKLIKAYGDRGNVKAA 142
S + D F I L KA N A
Sbjct: 58 NVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKAR----NTAKA 113
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ +F + +N + ++ ++ L + N + A +F ++ K+ VP + TY +I
Sbjct: 114 LDYFRSMECEKN---VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEW-TYNVLIN 169
Query: 203 GYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
G+CK+ + A + M + PN++ Y+T+I+GFC++ +++ A K +M+ GC P
Sbjct: 170 GFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMP 229
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N +TYN ++ GLC NG +DEA L+ +MR G + + ++ +++ GLC GK D A+
Sbjct: 230 NLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF 289
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ + PDV +Y +I G CK G+ DEA L ++MR +P V +F A+ L +
Sbjct: 290 EDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKG 349
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
L A +L+ M +C PN ++Y+++I GLC G+++D +++ RMI G +
Sbjct: 350 DRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC-KTGQVRDAQEVFKRMIVRGIEPNVVT 408
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVT 465
Y+ L+ G+C V++ + + EM
Sbjct: 409 YNSLIHGFCMTNGVDSALLLMEEMTA 434
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 188/358 (52%), Gaps = 5/358 (1%)
Query: 112 ASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
A + K +++ + LI + V A + K+ + +Y++++ R
Sbjct: 150 AKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQ 209
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
+ A + F Q+V EN P++ TY T++ G C+ G+++ A ++ D M ++P+ +
Sbjct: 210 TKVDTAYKLFRQMV-ENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFS 268
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y+T++ G CK G+++ A K + N C P+ + Y+ +I GLC GR+DEA L KMR
Sbjct: 269 YDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMR 328
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
N + +V T +++ GLC + +A L + + N P+V +Y +I+G CK G+
Sbjct: 329 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 388
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A + K M RG++P V ++N++ +D A+LL+++M CLP+ ++YNT+I
Sbjct: 389 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 448
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GLC GR + L M N D YSCL+ G+C+ ++ + +M+ +
Sbjct: 449 DGLC-KTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 505
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 182/347 (52%), Gaps = 11/347 (3%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F L+ G + A+ F NG C + +Y++L+ L + + A +
Sbjct: 267 FSYDTLMAGLCKTGKIDMALKVFEDNS---NGDCPPDVVAYSTLIAGLCKAGRLDEACKL 323
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFC 237
F ++ +EN PDV T+T ++ G CK ++ A++V + M + PN++ Y+++I+G C
Sbjct: 324 FEKM-RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 382
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G++ +A++ M+ RG PN +TYN++I+G C+ VD A +LM +M G ++
Sbjct: 383 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 442
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ GLC G+ +A ++ NPDV +Y +I GFCK+ + D A +L +M
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 502
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ + P V +F+ + G +D A LL++M DC P+ +Y +++ G C GR
Sbjct: 503 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKV-GR 561
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M + ++ RM + G + Y+ L+ +C G ++ EMV
Sbjct: 562 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMV 608
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 163/304 (53%), Gaps = 6/304 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L + ++ A+E F +++ + P+V TY ++I G+C +++A + +
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGI-EPNVVTYNSLIHGFCMTNGVDSALLLMEE 431
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT P+++ YNT+I+G CK G EA + +M + C P+ +TY+ +I G C R
Sbjct: 432 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 491
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A+ L M +V T ++++G C G D A L ++ ++ +PDV +Y
Sbjct: 492 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 551
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++GFCK+G+ EA +LK M RG +P V ++ A+ G+ A LL++M
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH-NLDFTMYSCLLKGYCEEGNVEN 455
PN ++Y ++I G C G +++ +++R+ R + D Y ++ G C G +
Sbjct: 612 VQPNVITYRSLIGGFC-GTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSA 670
Query: 456 VMQI 459
+++
Sbjct: 671 ALEL 674
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 156/275 (56%), Gaps = 7/275 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+ L+G ++ I +A F ++K+ V+P DV T++T++ GYC G++++A+++ +
Sbjct: 478 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLP-DVVTFSTLVEGYCNAGLVDDAERLLEE 536
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P++ Y ++++GFCK G + EA++ + M RGC+PN +TY A+I C G+
Sbjct: 537 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 596
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV-MEANMNPDVKSYE 335
A L+ +M NG + NV T++S++ G C G ++A L + + N D+ +Y
Sbjct: 597 PTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYR 656
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP-Q 394
V+++G C+ G+ A+ LL+ ++ G P + A+ R L + EL +A+ +L++M
Sbjct: 657 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 716
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
PN +Y +I L +GR ++ L D ++
Sbjct: 717 RKSRPNAEAYEAVIQEL-AREGRHEEANALADELL 750
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 159/314 (50%), Gaps = 5/314 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ L + A F + K PDV TY+ +I G+CK+ I+ A+ +FD
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDM-KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDD 501
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+++ ++T++ G+C G +++A++ + EM+ C P+ TY +++ G C GR
Sbjct: 502 MLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGR 561
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA+ ++ +M G + NV T+ +++ C GK A L ++ + P+V +Y
Sbjct: 562 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRS 621
Query: 337 VINGFCKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I GFC G +EA +L+ + R K +F++ + L G + A+ LL+ + Q
Sbjct: 622 LIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQS 681
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P Y +I GLC K + +E L + + + Y +++ EG E
Sbjct: 682 GTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEE 741
Query: 456 VMQIAHEMVTKKGR 469
+A E++ KG+
Sbjct: 742 ANALADELLGNKGQ 755
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 221/455 (48%), Gaps = 18/455 (3%)
Query: 15 PD---QSILVTSITSVIQ--RLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPY 69
PD ++ LVTSI I+ RL+ + S NI + LGS+ V V+
Sbjct: 42 PDFVRRADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSH-VAAVLRSLKVTG 100
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSH----SLISIAASLLKNSNKLSDFF 125
A+ FF WA + H Y + ++L++ +I +LK + F
Sbjct: 101 TAISFFRWAGEQA----GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFS 156
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ LI+++ A+ F K+ L+++ L+ L + + A E FH+++
Sbjct: 157 FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM 216
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
VPPD + +T M+R K ++ A++VF M P+ +AYNTMI+G K G
Sbjct: 217 AMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHA 276
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+EA K ++ M+ + C P E+TY ++ LC G ++ A+ L M +GF+ N + S+
Sbjct: 277 QEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSL 336
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G G+ +A ++EA PDV ++ V+I+G CK G ++A +EM G
Sbjct: 337 IHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGC 396
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KP V ++ + + L + G + A ++K M C P+ V+Y ++ G C GR+ +
Sbjct: 397 KPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL-GRLDEAA 455
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
L+D + + + + +YS L+ G C+ G+VE +
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 167/351 (47%), Gaps = 45/351 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y L+ L + +++ AEE F + P V YT++I G+ K G ++ A +FD
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSV-IYTSLIHGFAKSGRMKEACSLFDE 355
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +P+++ + MI+G CK G E+A K EMM GC+PN +TY +I GL GR
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 277 VDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
V A +M M +G F D+V T+ +L G C +G+ D+A L + + + +P+++ Y
Sbjct: 416 VANAFRIMKGMIAHGCFPDSV-TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYS 474
Query: 336 VVINGFC------------------------------------KIGKSDEAISLLKEMRA 359
++NG C K G+ DEA + + M +
Sbjct: 475 SLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVS 534
Query: 360 RGLKPTVFSFNAVFRILVENGE--LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
G KP ++N + L + E ++RA LL + ++ LP+ V+Y + GLC G
Sbjct: 535 EGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKI-GE 593
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ +++ G N D Y+ L G C +G V+ + + EMV + G
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 162/382 (42%), Gaps = 78/382 (20%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y SL+ + +K A F ++V E PDV T+T MI G CK G E A K F+ M
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMV-EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
KPN++ Y T+I G K G + A + M M+ GC P+ +TY ++ G C GR+
Sbjct: 392 MRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451
Query: 278 DEAKMLMAKMR--------------LNGFKDNVSTHK----------------------S 301
DEA L+ ++ +NG D S K S
Sbjct: 452 DEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCS 511
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC------------------- 342
++ GLC G+ D+A + ++ PD +Y ++ING C
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEK 571
Query: 343 ------------------KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
KIG+ D A+ +L+E +RG V ++ A+ L G++DR
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A+ L ++M + P+ +Y II GL K +++D D MI G Y+ L+
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKVK-KLEDACKFFDEMIGKGQKPTVATYTALV 690
Query: 445 KGYCEEGNVENVMQIAHEMVTK 466
+ C GNV+ M+ +
Sbjct: 691 QALCHAGNVDEAFHRFESMLAR 712
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 157/344 (45%), Gaps = 9/344 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSI-KLAEEFFHQIVKE 187
L+ + G + A + + + L Y+SL+ L S+ K ++ F Q K
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQ-SKA 499
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE--L 242
D ++I G CK G ++ A ++F M KP+ YN +ING C+ E +
Sbjct: 500 AAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRV 559
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E A ++++ G P+ +TY + GLC G VD A ++ + G+ +V + ++
Sbjct: 560 ERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL 619
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
GLC G+ D+AV + ++ PD +Y +ING K+ K ++A EM +G
Sbjct: 620 CTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQ 679
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQM-PQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
KPTV ++ A+ + L G +D A + M + + + + + Y+ +I G C A ++
Sbjct: 680 KPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKAL-KVDAA 738
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
L + MI G+ + L G G E ++ EM
Sbjct: 739 LKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAA 782
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 135/258 (52%), Gaps = 7/258 (2%)
Query: 160 SYNSLLGVLVRV--NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+YN L+ L R N ++ A H + K +P D TYT + G CK+G ++ A K+
Sbjct: 543 TYNILINGLCRSRENRVERAFALLHDLEKVGYLP-DAVTYTPLCIGLCKIGEVDRAVKML 601
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ + + +++AY + G C +G+++ A EM+ +G P+ Y +I GL
Sbjct: 602 EEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKV 661
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM-EANMNPDVKS 333
++++A +M G K V+T+ ++++ LC G D+A +++ + V
Sbjct: 662 KKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMI 721
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y+ +I+GFCK K D A+ L ++M +RG PT + ++F LV +G+ ++A LL++M
Sbjct: 722 YDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA 781
Query: 394 QMDCLPNFVSYNTIICGL 411
P+ ++ I+ GL
Sbjct: 782 AGGSPPHAATFTAILDGL 799
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCM 249
DV YT + G C G ++ A +F M + P+ AY +ING K +LE+A K
Sbjct: 612 DVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFF 671
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEA----KMLMAKMRLNGFKDNVSTHKSMLKG 305
+EM+ +G +P TY A++ LC G VDEA + ++A+ L G +V + +++ G
Sbjct: 672 DEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVG---SVMIYDALIHG 728
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C K D A+ +++ P + + +G + GK+++A LL+EM A G P
Sbjct: 729 FCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPH 788
Query: 366 VFSFNAVFRILVENGELDRAILLLKQ 391
+F A+ L ++ E + + L+++
Sbjct: 789 AATFTAILDGLRKSDESGKLLKLVQE 814
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 8/223 (3%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G V A+ +A A + +Y +L L + A F ++V++ P D +
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP-DAAA 650
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y +I G K+ +E+A K FD M KP + Y ++ C G ++EA M+
Sbjct: 651 YCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESML 710
Query: 254 NRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
RG + + Y+A+I+G C +VD A L M G T S+ GL GK
Sbjct: 711 ARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKT 770
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
++A L+ + P ++ +++G + KSDE+ LLK
Sbjct: 771 EKAQELLQEMAAGGSPPHAATFTAILDG---LRKSDESGKLLK 810
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 86/176 (48%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
GF+ +V T+ ++ L + Q +++A + P+ S+ ++I F + ++D+A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
++ + M+ + KP + +F + L + G ++A + +M M +P + +T +
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ R+++ ++ +M + G D Y+ ++ G + G+ + +++ M+ K
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 235/466 (50%), Gaps = 42/466 (9%)
Query: 21 VTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTK-----------VIYEQTNPY 69
V S+ RL QNP+P P +F+ LGS + +K + +E NP
Sbjct: 57 VVDAFSLFSRLLRQNPTP------PAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINP- 109
Query: 70 HALFFFNWASNPNPNPNK---YHHTTPCYTAITDVLLSHSLISIAASLLKNSN------K 120
LF F +P++ YH T +T + L I +LL + N +
Sbjct: 110 -VLFHFQ-------HPHQLMGYHPNTITFTTLIKGLCLKG--QIHQALLFHDNVVAMGFQ 159
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
L LI G +AA+ + + Y++++ + + + A +
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFC 237
+ ++V + + P+V TY+ +I G+ +G +++A +F+ M +KP++ +N +++GFC
Sbjct: 220 YSEMVSKGI-SPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFC 278
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G+++E K MM +G +PN +TY +++ G C+ V++AK ++ M G ++
Sbjct: 279 KDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQ 338
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
++ ++ G C + K D+A+ + + ++ PDV +Y +I+G CK+GK A+ L+ EM
Sbjct: 339 SYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 398
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
RG+ P + +++++ L +N ++D+AI LL ++ PN +Y +I GLC GR
Sbjct: 399 HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKG-GR 457
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++D ++ + ++ G+N+ Y+ ++ G+C +G + + + +M
Sbjct: 458 LEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKM 503
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 156/288 (54%), Gaps = 4/288 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + G +K AI F++ +Y++N L+ + +K + F ++K
Sbjct: 236 SALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMK 295
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + P+V TY +++ GYC + + AK + M+ V P++ +YN +I+GFCK +++
Sbjct: 296 QGI-KPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVD 354
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA EM ++ P+ +TYN++I GLC G++ A L+ +M G ++ T+ S+L
Sbjct: 355 EAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSIL 414
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC + D+A+ L + + + P++ +Y ++I+G CK G+ ++A ++ +++ +G
Sbjct: 415 DALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYN 474
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
TV ++ + G D A+ LL +M C+P+ V+Y II L
Sbjct: 475 ITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 130/229 (56%), Gaps = 4/229 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y SL+ V + A+ + + + V PD+ +Y +I G+CK+ ++ A +F
Sbjct: 304 TYCSLMDGYCLVKEVNKAKSILYTMSQRGV-NPDIQSYNILIDGFCKIKKVDEAMNLFKE 362
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ YN++I+G CK G++ A K ++EM +RG P+ +TY++++ LC N +
Sbjct: 363 MHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQ 422
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A L+ K++ G + N+ T+ ++ GLC G+ + A +++ N V +Y V
Sbjct: 423 VDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTV 482
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+I+GFC G DEA++LL +M+ P ++ + R L + E D+A
Sbjct: 483 MIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKA 531
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 118/206 (57%), Gaps = 5/206 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN L+ ++ + A F ++ ++++P DV TY ++I G CK+G I A K+ D
Sbjct: 339 SYNILIDGFCKIKKVDEAMNLFKEMHHKHIIP-DVVTYNSLIDGLCKLGKISYALKLVDE 397
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+++ Y+++++ CK ++++A + ++ ++G RPN TY +I GLC GR
Sbjct: 398 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGR 457
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+++A + + + G+ V+T+ M+ G C G FD+A+ L + + + PD +YE+
Sbjct: 458 LEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEI 517
Query: 337 VINGFCKIGKSDEAISLLKEMRARGL 362
+I ++D+A L+EM RGL
Sbjct: 518 IIRSLFDKDENDKA-EKLREMITRGL 542
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 17/169 (10%)
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF------ 367
A ++ N P + ++ K +SL ++M G+ P +F
Sbjct: 59 DAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPH 118
Query: 368 ----------SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+F + + L G++ +A+L + M + V Y T+I GLC G
Sbjct: 119 QLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKV-GE 177
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ DL+ R+ + + MYS ++ G C++ +V + + EMV+K
Sbjct: 178 TRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSK 226
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 192/345 (55%), Gaps = 9/345 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+KLI +GNV+ + F +K ++ G C L+++N + L R +I A I
Sbjct: 220 NKLIHVLCKKGNVQESEKLF--SKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
V E + P DV +Y T+I G+CK + A+ M V+PN YNT+INGFCK G
Sbjct: 278 VSEGLTP-DVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGM 336
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++ A K + + M +G P+E TY+++I GLC +G ++ A + + GFK ++ + +
Sbjct: 337 MQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNT 396
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++KGL G QA+ ++++ME +PD+ +Y +V+NG CK+G +A +L + A+G
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P +F+FN + + +D+AI +L M P+ ++YNT++ GLC A+ ++ +V
Sbjct: 457 CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKAR-KLDNV 515
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D M+ G + Y+ L++ +C++ V M++ EM T+
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 222/487 (45%), Gaps = 86/487 (17%)
Query: 58 VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSH----SLISIAAS 113
V VI Q +P +AL FN + + HT Y + + L H ++ + A
Sbjct: 10 VAAVIRYQNDPLNALKMFNQVKTEDG----FKHTLETYKCMIEKLGLHGKFEAMEDVLAE 65
Query: 114 LLKN--SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ KN S L +I +++ YG +G V+ A+ F + + + SYN+++ +LV
Sbjct: 66 MRKNVDSKMLEGVYIG-IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEY 124
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG-------MIEN------------ 212
A + + ++ K+ + PDV T+T ++ +C G ++ N
Sbjct: 125 GYFSQAHKVYMRM-KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183
Query: 213 ----------------AKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
A +FD M + P++L +N +I+ CKKG ++E++K +++M
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG PN T+N I GLC G +DEA L+ + G +V ++ +++ G C K
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A YL ++ + + P+ +Y +INGFCK G A +L++ +G P F+++++
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363
Query: 374 RILVENGELDRAIL-----------------------------------LLKQMPQMDCL 398
L +G+++RA+ L+K M + C
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P+ +YN ++ GLC G + D +++ I G D ++ L+ GYC++ N++ ++
Sbjct: 424 PDIWTYNLVVNGLC-KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482
Query: 459 IAHEMVT 465
I M++
Sbjct: 483 ILDTMLS 489
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 171/365 (46%), Gaps = 26/365 (7%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y+SL+ L + A F++ + E + Y T+++G K G++ A ++
Sbjct: 357 FTYSSLINGLCNDGDMNRAMAVFYEAM-EKGFKHSIILYNTLVKGLSKQGLVLQALQLMK 415
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M P++ YN ++NG CK G L +A +N+ + +GC P+ T+N +I G C
Sbjct: 416 DMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQR 475
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+D+A ++ M +G +V T+ ++L GLC K D V + ++E P++ +Y
Sbjct: 476 NMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYN 535
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++I FCK K EA+ L KEM+ RGL P + + + L NGELD+A L + +
Sbjct: 536 ILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595
Query: 396 DCLPNFVS-YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ +N +I C K + E L +M S D Y ++ YC+ GN++
Sbjct: 596 YKFSYSTAIFNIMINAFC-EKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNID 654
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVH---QVVVIMER 511
+AH FL + L+ T G ++ H + VVI+
Sbjct: 655 ----LAH-------------TFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINL 697
Query: 512 TVEDG 516
V++G
Sbjct: 698 MVQNG 702
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 150/317 (47%), Gaps = 6/317 (1%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
K S + L+K +G V A+ + +++YN ++ L ++ + A
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGF 236
+ + + +P D+ T+ T+I GYCK ++ A ++ D M + P+++ YNT++NG
Sbjct: 448 ILNDAIAKGCIP-DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
CK +L+ M+ +GC PN +TYN +I C + +V EA L +M+ G ++
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDI 566
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNV-MEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
T +++ GLC G+ D+A + E + + ++IN FC+ A L
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFH 626
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+M P +++ + + G +D A L + +P+F + ++ LC+
Sbjct: 627 KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTH 686
Query: 416 GRMQDVEDLVDRMIRSG 432
R+ + +++ M+++G
Sbjct: 687 -RLSEAVVIINLMVQNG 702
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 194/347 (55%), Gaps = 10/347 (2%)
Query: 115 LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+K++ D F + +I A + G++ A+ N + +Y +L+ R
Sbjct: 16 MKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPN---VVTYTALIAAFARAKK 72
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYN 230
++ A + ++ +E PP++ TY ++ CK+ M+ A+ V M PN++ +N
Sbjct: 73 LEEAMKLLEEM-RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFN 131
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
++++GFCK+G +++A+K + M+ +G RPN +TY+A+I GLC + + EAK ++ +M+ +
Sbjct: 132 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKAS 191
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G + T+ +++ GLC K ++A LR + + PDV Y +I+ FCK GK EA
Sbjct: 192 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEA 251
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM-DCLPNFVSYNTIIC 409
L+EMR + P V ++N V L + G++ A ++L QM + D LP+ V+Y+T+I
Sbjct: 252 QKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVIN 311
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
GLC + + + + L+DRM ++G N D Y+ ++ G C+ G +E
Sbjct: 312 GLCKSD-MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 201/381 (52%), Gaps = 16/381 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAA--IFWFHQ 148
Y + D L S++ A ++K + + L+ + RGNV A +
Sbjct: 95 YNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMV 154
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
AK + + +Y++L+ L + A+E ++ K + V PD TY+ +I G CK
Sbjct: 155 AKGMRPN--VVTYSALIDGLCKSQKFLEAKEVLEEM-KASGVTPDAFTYSALIHGLCKAD 211
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
IE A+++ M P+++ Y+++I+ FCK G+L EA+K + EM + P+ +TYN
Sbjct: 212 KIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYN 271
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+I GLC G++ EA++++ +M+ +G +V T+ +++ GLC +A L + +
Sbjct: 272 TVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK 331
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
A NPDV +Y +I+G CK G+ +EA LL+ M+ G P V ++ + L + ++D
Sbjct: 332 AGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDE 391
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI--RSGHNLDFTMYSC 442
A ++++M C PN V+YNT++ GLC++ GR+++ + LV RM R+ + D Y
Sbjct: 392 AERVMEEMRNAGCPPNLVTYNTMVNGLCVS-GRIKEAQQLVQRMKDGRAECSPDAATYRT 450
Query: 443 LLKGYCEEGNVENVMQIAHEM 463
++ V+ Q+ +M
Sbjct: 451 IVNALMSSDLVQEAEQLLEQM 471
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 141/272 (51%), Gaps = 1/272 (0%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
PD T+T +I G ++ A M PN++ Y +I F + +LEEA K + E
Sbjct: 23 PDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEE 82
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M RGC PN +TYN ++ LC V A+ ++ KM GF NV T S++ G C G
Sbjct: 83 MRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGN 142
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A L ++ M P+V +Y +I+G CK K EA +L+EM+A G+ P F+++A
Sbjct: 143 VDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSA 202
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L + +++ A +L++M C P+ V Y++II C + G++ + + + M +
Sbjct: 203 LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKS-GKLLEAQKTLQEMRKQ 261
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ D Y+ ++ G C+ G + I +M
Sbjct: 262 RKSPDVVTYNTVIDGLCKLGKIAEAQVILDQM 293
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G + A L+ +M+ GF + TH ++ + G D A+ +LR++ +P+V
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I F + K +EA+ LL+EMR RG P + ++N + L + + A ++K+
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + PN +++N+++ G C +G + D L+ M+ G + YS L+ G C+
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFC-KRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176
Query: 452 NVENVMQIAHEM 463
++ EM
Sbjct: 177 KFLEAKEVLEEM 188
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G A+ L + A PD ++ +I G D A+ L+ M G P V
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK--GRMQDVEDL 424
++ A+ +L+ A+ LL++M + C PN V+YN ++ LC G QDV
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV--- 114
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
V +MI G + ++ L+ G+C+ GNV++ ++ MV K R
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR 159
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 192/345 (55%), Gaps = 9/345 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+KLI +GNV+ + F +K ++ G C L+++N + L R +I A I
Sbjct: 220 NKLIHVLCKKGNVQESEKLF--SKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
V E + P DV +Y T+I G+CK + A+ M V+PN YNT+INGFCK G
Sbjct: 278 VSEGLTP-DVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGM 336
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++ A K + + M +G P+E TY+++I GLC +G ++ A + + GFK ++ + +
Sbjct: 337 MQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNT 396
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++KGL G QA+ ++++ME +PD+ +Y +V+NG CK+G +A +L + A+G
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P +F+FN + + +D+AI +L M P+ ++YNT++ GLC A+ ++ +V
Sbjct: 457 CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKAR-KLDNV 515
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D M+ G + Y+ L++ +C++ V M++ EM T+
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 222/487 (45%), Gaps = 86/487 (17%)
Query: 58 VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSH----SLISIAAS 113
V VI Q +P +AL FN + + HT Y + + L H ++ + A
Sbjct: 10 VAAVIRYQNDPLNALKMFNQVKTEDG----FKHTLETYKCMIEKLGLHGKFEAMEDVLAE 65
Query: 114 LLKN--SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ KN S L +I +++ YG +G V+ A+ F + + + SYN+++ +LV
Sbjct: 66 MRKNVDSKMLEGVYIG-IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEY 124
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG-------MIEN------------ 212
A + + ++ K+ + PDV T+T ++ +C G ++ N
Sbjct: 125 GYFSQAHKVYMRM-KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183
Query: 213 ----------------AKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
A +FD M + P++L +N +I+ CKKG ++E++K +++M
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG PN T+N I GLC G +DEA L+ + G +V ++ +++ G C K
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A YL ++ + + P+ +Y +INGFCK G A +L++ +G P F+++++
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363
Query: 374 RILVENGELDRAIL-----------------------------------LLKQMPQMDCL 398
L +G+++RA+ L+K M + C
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P+ +YN ++ GLC G + D +++ I G D ++ L+ GYC++ N++ ++
Sbjct: 424 PDIWTYNLVVNGLC-KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482
Query: 459 IAHEMVT 465
I M++
Sbjct: 483 ILDTMLS 489
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 173/365 (47%), Gaps = 26/365 (7%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF- 217
++Y+SL+ L + A F++ + E + Y T+++G K G++ A ++
Sbjct: 357 FTYSSLINGLCNDGDMNRAMAVFYEAM-EKGFKHSIILYNTLVKGLSKQGLVLQALQLMK 415
Query: 218 DVMT--VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
D+M P++ YN ++NG CK G L +A +N+ + +GC P+ T+N +I G C
Sbjct: 416 DMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQR 475
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+D+A ++ M +G +V T+ ++L GLC K D V + ++E P++ +Y
Sbjct: 476 NMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYN 535
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++I FCK K EA+ L KEM+ RGL P + + + L NGELD+A L + +
Sbjct: 536 ILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595
Query: 396 DCLPNFVS-YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ +N +I C K + E L +M S D Y ++ YC+ GN++
Sbjct: 596 YKFSYSTAIFNIMINAFC-XKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNID 654
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVH---QVVVIMER 511
+AH FL + L+ T G ++ H + VVI+
Sbjct: 655 ----LAH-------------TFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINL 697
Query: 512 TVEDG 516
V++G
Sbjct: 698 MVQNG 702
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 149/317 (47%), Gaps = 6/317 (1%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
K S + L+K +G V A+ + +++YN ++ L ++ + A
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGF 236
+ + + +P D+ T+ T+I GYCK ++ A ++ D M + P+++ YNT++NG
Sbjct: 448 ILNDAIAKGCIP-DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
CK +L+ M+ +GC PN +TYN +I C + +V EA L +M+ G ++
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDI 566
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNV-MEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
T +++ GLC G+ D+A + E + + ++IN FC A L
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFH 626
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+M P +++ + + G +D A L + +P+F + ++ LC+
Sbjct: 627 KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTH 686
Query: 416 GRMQDVEDLVDRMIRSG 432
R+ + +++ M+++G
Sbjct: 687 -RLSEAVVIINLMVQNG 702
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 171/304 (56%), Gaps = 2/304 (0%)
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV 222
SL+ R+ K A + +I++++ PDV TY +I GYCK G I+NA +V D M V
Sbjct: 154 SLIRGFCRIGKTKKAT-WVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNV 212
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P+++ YNT++ C G+L++A + ++ + + C P+ +TY +I C V +A
Sbjct: 213 APDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMK 272
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L+ +MR G K +V T+ ++ G+C G+ D+A+ +L N+ P+V ++ +++ C
Sbjct: 273 LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 332
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
G+ +A LL +M +G P+V +FN + L G L RAI +L++MP C PN +
Sbjct: 333 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 392
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
SYN ++ G C K +M + +D M+ G D Y+ LL C++G V+ ++I ++
Sbjct: 393 SYNPLLHGFCKEK-KMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 451
Query: 463 MVTK 466
+ +K
Sbjct: 452 LSSK 455
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 182/355 (51%), Gaps = 11/355 (3%)
Query: 114 LLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+L+ S + D + LI Y G + A+ + + + +YN++L L
Sbjct: 174 ILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPD---VVTYNTILRTLCDSG 230
Query: 173 SIKLAEEFF-HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
+K A E Q+ KE PDV TYT +I CK + A K+ D M KP+++
Sbjct: 231 KLKQAMEVLDRQLQKE--CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVT 288
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YN +ING CK+G L+EA K +N M + GC+PN +T+N ++ +C GR +A+ L++ M
Sbjct: 289 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML 348
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G +V T ++ LC G +A+ L + P+ SY +++GFCK K D
Sbjct: 349 RKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMD 408
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
AI L M +RG P + ++N + L ++G++D A+ +L Q+ C P ++YNT+I
Sbjct: 409 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVI 468
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GL G+ + L+D M R G D YS L+ G EG V+ ++ H++
Sbjct: 469 DGLSKV-GKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 522
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 172/342 (50%), Gaps = 7/342 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+A V A+ + + + + +YN L+ + + + A +F + +
Sbjct: 257 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 316
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P+V T+ ++R C G +A+K+ M K P+++ +N +IN C++G L A
Sbjct: 317 C-QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 375
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M GC PN L+YN +++G C ++D A + M G ++ T+ ++L
Sbjct: 376 IDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 435
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC GK D AV L + +P + +Y VI+G K+GK++ AI LL EMR +GLKP
Sbjct: 436 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 495
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE-DL 424
+ +++++ L G++D AI + + PN ++YN+I+ GLC K R D D
Sbjct: 496 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC--KSRQTDRAIDF 553
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ MI Y+ L++G EG + + + +E+ ++
Sbjct: 554 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 595
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 140/266 (52%), Gaps = 7/266 (2%)
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+R + G +E+ K + M + P+++ ++I GFC+ G+ ++A M + G
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +TYN +I G C +G +D A ++ +M + +V T+ ++L+ LC GK QA+
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMNV---APDVVTYNTILRTLCDSGKLKQAME 237
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L ++ PDV +Y ++I CK +A+ LL EMR +G KP V ++N + +
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G LD AI L MP C PN +++N I+ +C + GR D E L+ M+R G +
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC-STGRWMDAEKLLSDMLRKGCSPSV 356
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
++ L+ C +G + + I +M
Sbjct: 357 VTFNILINFLCRQGLLGRAIDILEKM 382
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 113/206 (54%), Gaps = 4/206 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL + + A E+ +V P D+ TY T++ CK G ++ A ++ +
Sbjct: 393 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP-DIVTYNTLLTALCKDGKVDVAVEILNQ 451
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
++ K P L+ YNT+I+G K G+ E A K ++EM +G +P+ +TY++++ GL G+
Sbjct: 452 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 511
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA + G + N T+ S++ GLC + D+A+ +L ++ P +Y +
Sbjct: 512 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 571
Query: 337 VINGFCKIGKSDEAISLLKEMRARGL 362
+I G G + EA+ LL E+ +RGL
Sbjct: 572 LIEGIAYEGLAKEALDLLNELCSRGL 597
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A G V A+ +Q L +YN+++ L +V + A + ++ ++
Sbjct: 432 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 491
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ PD+ TY++++ G + G ++ A K F + + ++PN + YN+++ G CK + + A
Sbjct: 492 L-KPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 550
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ M+++ C+P E TY +I G+ G EA L+ ++ G S + +K
Sbjct: 551 IDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 609
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 183/343 (53%), Gaps = 7/343 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV-NSIKL-AEEFFHQIVK 186
++K+Y + A+ + AK + SYNS+L +VR S+KL AEE + ++++
Sbjct: 148 MVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIR 207
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
V P+V TY +IRG+C +G ++ F M PN++ YNT+I+ +CK G ++
Sbjct: 208 SRV-SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 266
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + M ++G +PN ++YN +I GLC G + EA ++ +M GF + T+ ++L
Sbjct: 267 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 326
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C G F QA+ ++ ++P V +Y +IN CK + A+ +MR RGL+
Sbjct: 327 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLR 386
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P ++ + G L+ A +L +M + P+ V+YN I G C+ + RM++
Sbjct: 387 PNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE-RMEEALG 445
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+V M+ G D YS ++ G+C +G ++ Q+ EMV K
Sbjct: 446 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 488
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 172/342 (50%), Gaps = 5/342 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY G + A L SYN ++ L R S+K A E ++ +
Sbjct: 255 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 314
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P +V TY T++ GYCK G A + M V P+++ Y +IN CK L A
Sbjct: 315 FTPDEV-TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 373
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++M RG RPNE TY +I G G ++EA ++ +M +GF +V T+ + + G
Sbjct: 374 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
CV+ + ++A+G ++ ++E + PDV SY +I+GFC+ G+ D A + +EM +G+ P
Sbjct: 434 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 493
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+++++ + L E L A L ++M M P+ +Y T+I C+ +G + L
Sbjct: 494 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV-EGDLNKALHLH 552
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D MI G D YS L+ G ++ ++ +++ ++
Sbjct: 553 DEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 594
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 178/356 (50%), Gaps = 24/356 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L+ Y GN A+ A+ + NG + +Y +L+ + + ++ A EFF Q+ +
Sbjct: 325 LLNGYCKEGNFHQALVI--HAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-R 381
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ P+ TYTT+I G+ + G++ A ++ + MT P+++ YN I+G C +E
Sbjct: 382 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 441
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + EM+ +G P+ ++Y+ +I G C G +D A + +M G + T+ S++
Sbjct: 442 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 501
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+GLC + + +A + +++ + PD +Y +IN +C G ++A+ L EM +G
Sbjct: 502 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL 561
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII--C------------ 409
P +++ + L + A LL ++ + +P+ V+Y+T+I C
Sbjct: 562 PDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALI 621
Query: 410 -GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G CM KG M + + + + M+ H +Y+ ++ G+C GN+ + EM+
Sbjct: 622 KGFCM-KGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMI 676
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 141/292 (48%), Gaps = 22/292 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
SY++++ R + A + ++V E V PD TY+++I+G C+M + A ++
Sbjct: 461 SYSTIISGFCRKGELDRAFQMKQEMV-EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQE 519
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ D M + P+ Y T+IN +C +G+L +A +EM+++G P+ +TY+ +I GL
Sbjct: 520 MLD-MGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQA 578
Query: 276 RVDEAKMLMAKM----------RLNGFKDNVSTHK-----SMLKGLCVVGKFDQAVGYLR 320
R EAK L+ K+ + +N S + +++KG C+ G +A
Sbjct: 579 RTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFE 638
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+++E N P Y V+I+G C+ G +A +L KEM G P + + + L + G
Sbjct: 639 SMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEG 698
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ ++ + C N ++ + +G M+ V +++ M + G
Sbjct: 699 MNEEMSEVIGDTLR-SCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDG 749
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 119/295 (40%), Gaps = 62/295 (21%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQ--IENGAC--LYSYNSLLGVLVRVNSIKLAEEFFH 182
S +I + +G + A Q KQ +E G +Y+SL+ L + + A +
Sbjct: 463 STIISGFCRKGELDRAF----QMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQ 518
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMING---- 235
+++ + PPD TYTT+I YC G + A + D M K P+ + Y+ +ING
Sbjct: 519 EMLDMGL-PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQ 577
Query: 236 ----------------------------------------------FCKKGELEEAKKCM 249
FC KG + EA +
Sbjct: 578 ARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVF 637
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
M+ R +P E YN +I+G C G + +A L +M +GF + T +++K L
Sbjct: 638 ESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKE 697
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G ++ + + + + + + +V++ K G + +++L +M GL P
Sbjct: 698 GMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLP 752
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 38/176 (21%)
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN-------- 379
N +++++ + + D+A++ + ++ G P V S+N+V +V +
Sbjct: 139 NSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSA 198
Query: 380 -----------------------------GELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GEL + + +M + CLPN V+YNT+I
Sbjct: 199 EEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDA 258
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
C GR+ + L+ M G + Y+ ++ G C EG+++ +I EM K
Sbjct: 259 YC-KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK 313
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 171/305 (56%), Gaps = 2/305 (0%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
SL+ R+ K A + +I++++ PDV TY +I GYCK G I+NA +V D M
Sbjct: 96 TSLIRGFCRIGKTKKAT-WVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN 154
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
V P+++ YNT++ C G+L++A + ++ + + C P+ +TY +I C V +A
Sbjct: 155 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 214
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L+ +MR G K +V T+ ++ G+C G+ D+A+ +L N+ P+V ++ +++
Sbjct: 215 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 274
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C G+ +A LL +M +G P+V +FN + L G L RAI +L++MP C PN
Sbjct: 275 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
+SYN ++ G C K +M + +D M+ G D Y+ LL C++G V+ ++I +
Sbjct: 335 LSYNPLLHGFCKEK-KMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 393
Query: 462 EMVTK 466
++ +K
Sbjct: 394 QLSSK 398
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 182/355 (51%), Gaps = 11/355 (3%)
Query: 114 LLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+L+ S + D + LI Y G + A+ + + + +YN++L L
Sbjct: 117 ILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPD---VVTYNTILRTLCDSG 173
Query: 173 SIKLAEEFF-HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
+K A E Q+ KE PDV TYT +I CK + A K+ D M KP+++
Sbjct: 174 KLKQAMEVLDRQLQKE--CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVT 231
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YN +ING CK+G L+EA K +N M + GC+PN +T+N ++ +C GR +A+ L++ M
Sbjct: 232 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML 291
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G +V T ++ LC G +A+ L + P+ SY +++GFCK K D
Sbjct: 292 RKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMD 351
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
AI L M +RG P + ++N + L ++G++D A+ +L Q+ C P ++YNT+I
Sbjct: 352 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVI 411
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GL G+ + L+D M R G D YS L+ G EG V+ ++ H++
Sbjct: 412 DGLSKV-GKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 465
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 172/342 (50%), Gaps = 7/342 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+A V A+ + + + + +YN L+ + + + A +F + +
Sbjct: 200 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 259
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P+V T+ ++R C G +A+K+ M K P+++ +N +IN C++G L A
Sbjct: 260 C-QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 318
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M GC PN L+YN +++G C ++D A + M G ++ T+ ++L
Sbjct: 319 IDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 378
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC GK D AV L + +P + +Y VI+G K+GK++ AI LL EMR +GLKP
Sbjct: 379 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 438
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE-DL 424
+ +++++ L G++D AI + + PN ++YN+I+ GLC K R D D
Sbjct: 439 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC--KSRQTDRAIDF 496
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ MI Y+ L++G EG + + + +E+ ++
Sbjct: 497 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 538
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 140/266 (52%), Gaps = 7/266 (2%)
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+R + G +E+ K + M + P+++ ++I GFC+ G+ ++A M + G
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +TYN +I G C +G +D A ++ +M + +V T+ ++L+ LC GK QA+
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMNV---APDVVTYNTILRTLCDSGKLKQAME 180
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L ++ PDV +Y ++I CK +A+ LL EMR +G KP V ++N + +
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G LD AI L MP C PN +++N I+ +C + GR D E L+ M+R G +
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC-STGRWMDAEKLLSDMLRKGCSPSV 299
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
++ L+ C +G + + I +M
Sbjct: 300 VTFNILINFLCRQGLLGRAIDILEKM 325
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 113/206 (54%), Gaps = 4/206 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL + + A E+ +V P D+ TY T++ CK G ++ A ++ +
Sbjct: 336 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP-DIVTYNTLLTALCKDGKVDVAVEILNQ 394
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
++ K P L+ YNT+I+G K G+ E A K ++EM +G +P+ +TY++++ GL G+
Sbjct: 395 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 454
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA + G + N T+ S++ GLC + D+A+ +L ++ P +Y +
Sbjct: 455 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 514
Query: 337 VINGFCKIGKSDEAISLLKEMRARGL 362
+I G G + EA+ LL E+ +RGL
Sbjct: 515 LIEGIAYEGLAKEALDLLNELCSRGL 540
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A G V A+ +Q L +YN+++ L +V + A + ++ ++
Sbjct: 375 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 434
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ PD+ TY++++ G + G ++ A K F + + ++PN + YN+++ G CK + + A
Sbjct: 435 L-KPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 493
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ M+++ C+P E TY +I G+ G EA L+ ++ G S + +K
Sbjct: 494 IDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 552
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 198/375 (52%), Gaps = 8/375 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
YT +T + A + +N + +I + + + A+ + + + +
Sbjct: 198 YTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKV 257
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
+++YN L+ L + + A E H++V V P D T+ +++ G CK G E A
Sbjct: 258 APDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTP-DTVTFNSIMDGLCKAGKFERAH 316
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+ VM +P+ YNT+I+G CK+ ++ AK ++E ++ G P+ +TY+ + GL
Sbjct: 317 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGL 376
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C GR+DEA L+ +M G N+ T+ +++ GLC K ++A L +++ + PDV
Sbjct: 377 CKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDV 436
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y ++++G CK G+ D+A+ +++ M RG P+V ++ A+ L G +D A + K+
Sbjct: 437 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 496
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M DC + ++Y +++ G C + R ++ + +VD IR +D +Y+ L+ GYC+EG
Sbjct: 497 MVSKDCTADALAYVSLVNGYCKS-SRTKEAQKVVDG-IRGTPYID--VYNALMDGYCKEG 552
Query: 452 NVENVMQIAHEMVTK 466
++ + + +M +
Sbjct: 553 RLDEIPNVFEDMACR 567
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 207/427 (48%), Gaps = 44/427 (10%)
Query: 44 QPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLL 103
+ L+Q+ L +V++V+ +P A+ FF WA + + H+T LL
Sbjct: 82 ERLEQWRGTLQPAVVSRVLQRLKDPQTAIVFFVWAGD-----RGFKHSTFTRNCFLQTLL 136
Query: 104 SHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNS 163
+ +S+++ F L Y Y+Y+
Sbjct: 137 ENG----------SSDRIPAMFERMLDAGYAPDS---------------------YTYHL 165
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
++ L ++N I A F + K V P+VS YT + R +CK G +++A ++F +
Sbjct: 166 VIKSLCQMNQIDKA---FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP 222
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
P+ +AYN +I+G C+K + + A + + EM R P+ TYN +I GLC + D+A
Sbjct: 223 -SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKAS 281
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
++ +M G + T S++ GLC GKF++A L + E N P +Y +I+G
Sbjct: 282 EMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGL 341
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK D A L+ E + G P V +++ + L + G +D A L+K+M C PN
Sbjct: 342 CKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNL 401
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
V+YNT+I GLC A + + +L++ ++ SG D Y+ ++ G C+EG ++ +++
Sbjct: 402 VTYNTLIDGLCKA-SKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVE 460
Query: 462 EMVTKKG 468
M+ K+G
Sbjct: 461 GML-KRG 466
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 157/307 (51%), Gaps = 3/307 (0%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ L R + A F ++V ++ D Y +++ GYCK + A+KV D
Sbjct: 473 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA-DALAYVSLVNGYCKSSRTKEAQKVVDG 531
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+ P + YN +++G+CK+G L+E +M RGC PN TYN ++ GLC +G+VDE
Sbjct: 532 IRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDE 591
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A + M G +V ++ ++ GL K +A L +++A + PD +Y ++
Sbjct: 592 AFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA 651
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
FCK + D+A+ +LK M G+ P ++N + L + L A L+ +M + C+
Sbjct: 652 QFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVV 711
Query: 400 NF-VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
+ +YNTII LC +G ++ L+D M G + Y+ + C+EG ++
Sbjct: 712 SACTTYNTIIDRLC-KEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASS 770
Query: 459 IAHEMVT 465
+ EM T
Sbjct: 771 LLSEMDT 777
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 157/320 (49%), Gaps = 10/320 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN ++ L + + K A + Q+++ + PPD TY T++ +CK ++A +
Sbjct: 610 SYNIIIDGLFKASKPKEARQVLDQMIQAGI-PPDAVTYNTLMAQFCKEERFDDAVGILKN 668
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT-YNAMIYGLCING 275
M V P+ + YNT+I+G + L +A + M+EM+ GC + T YN +I LC G
Sbjct: 669 MIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG 728
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ +A +LM M +G + N T+ + LC G+ D+A L E + D SY
Sbjct: 729 CLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS---EMDTLRDEVSYT 785
Query: 336 VVINGFCKIGKSDEAISLLKEMRA-RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
VI G CK + D A L +EM A +GL T +FN + + LD A+ LL M Q
Sbjct: 786 TVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQ 845
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ ++YN +I LC ++ +L D M G Y+ L+ G C +G +
Sbjct: 846 RGCSPSVITYNMVITCLCKLD-KVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGK 904
Query: 455 NVMQIAHEMVTKKGRLLKLK 474
+Q+ EM + + LK
Sbjct: 905 EALQVLEEMASSDCEIDDLK 924
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL----AYNTMINGFCKKGELEEAKKC 248
D +YTT+I G CK ++ A K+ M L +N +I+ F K L+EA
Sbjct: 780 DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 839
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M+ RGC P+ +TYN +I LC +VD+A L +M + G + ++ ++ GLC
Sbjct: 840 LGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCG 899
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
G+ +A+ L + ++ D +E V
Sbjct: 900 QGRGKEALQVLEEMASSDCEIDDLKWEDV 928
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 241/479 (50%), Gaps = 53/479 (11%)
Query: 23 SITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPN 82
S+ S R+ NP+P P+ +F LGS +V Y+ H FN ++
Sbjct: 39 SLVSSFNRILNINPTP------PIFEFGKILGS-LVKINCYQTAISLHREMEFNGIAS-- 89
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
+ ++ C++ + +H S+ A++LK + + ++ LIK +G + A
Sbjct: 90 -DLVTFNILINCFSQLGH---THFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQA 145
Query: 143 IFW--------FHQAK----QIENGAC-----------------------LYSYNSLLGV 167
+ + FH K + NG C + YN+++
Sbjct: 146 LHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDS 205
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
+ +V + A + + ++V + + PDV TY+ +I G+C +G + +A +F+ M + P
Sbjct: 206 MCKVKLVNEAFDLYSEMVSKGI-SPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINP 264
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
++ ++ +++GFCK+G ++EAK + MM +G +P+ +TY +++ G C+ +V++AK +
Sbjct: 265 DVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIF 324
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G NV ++ M+ G C + K D+A+ + + N+ PDV +Y +I+G CK
Sbjct: 325 NTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKS 384
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
GK A+ L+ EM RG+ ++N++ L +N ++D+AI LL +M P+ +Y
Sbjct: 385 GKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTY 444
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I GLC GR++D +++ + ++ G+N+ Y+ +++G+C+ + + + +M
Sbjct: 445 TILIDGLCKG-GRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKM 502
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 167/321 (52%), Gaps = 5/321 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + G + AI F++ E +Y+++ L+ + +K A+ ++K
Sbjct: 235 SALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMK 294
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + PDV TY +++ GYC + + AK +F+ M V N+ +YN MINGFCK +++
Sbjct: 295 QGI-KPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA EM + P+ +TYN++I GLC +G++ A L+ +M G + T+ S+L
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC + D+A+ L + + + PD+ +Y ++I+G CK G+ +A ++ +++ +G
Sbjct: 414 DALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYN 473
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
TV+++ + + +N D+A+ LL +M C+PN +Y II L K E
Sbjct: 474 ITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSL-FEKDENDMAEK 532
Query: 424 LVDRMIRSGHNLDFTMYSCLL 444
L+ MI G + CL
Sbjct: 533 LLREMIARGLLFGWKKAYCLF 553
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 54/300 (18%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P + + ++ K + A EM G + +T+N +I G + +
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
A + G++ N T +++KGLC+ G+ QA+ + V+ + + Y +ING CK
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+G++ A+ LL+ + + LV+ PN V
Sbjct: 174 VGQTSAALQLLRRVDGK---------------LVQ--------------------PNVVM 198
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YNTII +C K + + DL M+ G + D YS L+ G+C G + + + + ++M
Sbjct: 199 YNTIIDSMCKVK-LVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKM 257
Query: 464 VT------------------KKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQV 505
++ K+GR+ + KN L ++ + +VT S + + V QV
Sbjct: 258 ISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQV 317
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 206/412 (50%), Gaps = 24/412 (5%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---NSNKLSDFFI 126
AL F + +P+ Y YTA+ L + + A L+ N N +
Sbjct: 29 QALIFLGKMVSKGFHPDVYT-----YTAVIHALCVENRLHEARKFLEEMANRNLTPNVVT 83
Query: 127 -SKLIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFH 182
+ LI G V A+ + ++ C+ +YNSL+ L + A +
Sbjct: 84 YTVLIDGLCKGGRVDEAVALLSKMRK----KCVPTAVTYNSLISGLCKAERASEAYDLLE 139
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
++V +P D+ TYTT+I G+CK ++A +VF+ + + P+++ Y+ +I+G CK+
Sbjct: 140 EMVYSGCIP-DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKE 198
Query: 240 GELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G L+EA M+ G C PN +TYN++I G C G++DEA L+ +M G +V T
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVT 258
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ G C + + D A L + + PDV ++ +++G C+ + +A+ +L EMR
Sbjct: 259 YTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMR 318
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+ PTV+++N + +L+ A + + +MDC PN VS+N +I GLC R
Sbjct: 319 RKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVN-RS 375
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ +LV+ R N D MY+ ++ G C E V+ ++ +M+ + G L
Sbjct: 376 SEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCL 427
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 171/305 (56%), Gaps = 8/305 (2%)
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+V N D TYT++I+G CK+ +E A M K P++ Y +I+ C +
Sbjct: 1 MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
L EA+K + EM NR PN +TY +I GLC GRVDEA L++KMR V T+
Sbjct: 61 RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYN 119
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S++ GLC + +A L ++ + PD+ +Y +I GFCK KSD+A+ + +++ AR
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM-DCLPNFVSYNTIICGLCMAKGRMQ 419
G +P V +++ + L + G L AI L +M + C+PN V+YN++I G C G+M
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRM-GKMD 238
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTR 479
+ +L++RM +G + D Y+ L+ G+C+ +++ + ++M T+KG + F T
Sbjct: 239 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM-TRKGLTPDVVTF-TS 296
Query: 480 VVDAL 484
++D L
Sbjct: 297 LMDGL 301
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 191/387 (49%), Gaps = 21/387 (5%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLKN---SNKLSDFFI-SKLIKAYGDRGNVKAAIFWF 146
T Y ++ L S A LL+ S + D F + LI + A+ F
Sbjct: 114 TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 173
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
Q + +Y+ L+ L + +K A + F +++K P+ TY ++I G+C+
Sbjct: 174 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 233
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
MG ++ A + + M P+++ Y T++NGFCK L++A +N+M +G P+ +T
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
+ +++ GLC R+ +A ++ +MR V T+ ++L G C + ++A ++ +
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LE 351
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
E + P+V S+ ++I G CK+ +S EA+ L++E R R P V + V L ++D
Sbjct: 352 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVD 411
Query: 384 RAILLLKQM-PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM---IRSGHNLDFTM 439
A + ++M + CLPN ++Y+T++ GLC A ++DR I G +
Sbjct: 412 EACRVYRKMLEEPGCLPNSITYSTLVTGLCNA--------GMLDRARGYIEKGCVPNIGT 463
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+ + + E+ ++ +MV +
Sbjct: 464 YNLLIDAFRKANRDEDARELLDDMVQR 490
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 7/205 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK-VFD 218
++ SL+ L R N + A ++ +++ P V TY T++ GYC+ +E A+K + +
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSC-SPTVYTYNTILDGYCRANQLEEARKFMLE 351
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
M PN++++N MI G CK EA + + E R C P+ + Y +I GLC +VD
Sbjct: 352 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVD 411
Query: 279 EAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA + KM G N T+ +++ GLC G D+A GY+ E P++ +Y ++
Sbjct: 412 EACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIGTYNLL 467
Query: 338 INGFCKIGKSDEAISLLKEMRARGL 362
I+ F K + ++A LL +M RG
Sbjct: 468 IDAFRKANRDEDARELLDDMVQRGF 492
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 206/412 (50%), Gaps = 24/412 (5%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---NSNKLSDFFI 126
AL F + +P+ Y YTA+ L + + A L+ N N +
Sbjct: 29 QALIFLGKMVSKGFHPDVYT-----YTAVIHALCVENRLHEARKFLEEMANRNLTPNVVT 83
Query: 127 -SKLIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFH 182
+ LI G V A+ + ++ C+ +YNSL+ L + A +
Sbjct: 84 YTVLIDGLCKGGRVDEAVALLSKMRK----KCVPTAVTYNSLISGLCKAERASEAYDLLE 139
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
++V +P D+ TYTT+I G+CK ++A +VF+ + + P+++ Y+ +I+G CK+
Sbjct: 140 EMVYSGCIP-DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKE 198
Query: 240 GELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G L+EA M+ G C PN +TYN++I G C G++DEA L+ +M G +V T
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVT 258
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ G C + + D A L + + PDV ++ +++G C+ + +A+ +L EMR
Sbjct: 259 YTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMR 318
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+ PTV+++N + +L+ A + + +MDC PN VS+N +I GLC R
Sbjct: 319 RKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVN-RS 375
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ +LV+ R N D MY+ ++ G C E V+ ++ +M+ + G L
Sbjct: 376 SEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCL 427
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 171/305 (56%), Gaps = 8/305 (2%)
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+V N D TYT++I+G CK+ +E A M K P++ Y +I+ C +
Sbjct: 1 MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
L EA+K + EM NR PN +TY +I GLC GRVDEA L++KMR V T+
Sbjct: 61 RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYN 119
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S++ GLC + +A L ++ + PD+ +Y +I GFCK KSD+A+ + +++ AR
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM-DCLPNFVSYNTIICGLCMAKGRMQ 419
G +P V +++ + L + G L AI L +M + C+PN V+YN++I G C G+M
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRM-GKMD 238
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTR 479
+ +L++RM +G + D Y+ L+ G+C+ +++ + ++M T+KG + F T
Sbjct: 239 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM-TRKGLTPDVVTF-TS 296
Query: 480 VVDAL 484
++D L
Sbjct: 297 LMDGL 301
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 191/387 (49%), Gaps = 21/387 (5%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLKN---SNKLSDFFI-SKLIKAYGDRGNVKAAIFWF 146
T Y ++ L S A LL+ S + D F + LI + A+ F
Sbjct: 114 TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 173
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
Q + +Y+ L+ L + +K A + F +++K P+ TY ++I G+C+
Sbjct: 174 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 233
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
MG ++ A + + M P+++ Y T++NGFCK L++A +N+M +G P+ +T
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
+ +++ GLC R+ +A ++ +MR V T+ ++L G C + ++A ++ +
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LE 351
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
E + P+V S+ ++I G CK+ +S EA+ L++E R R P V + V L ++D
Sbjct: 352 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVD 411
Query: 384 RAILLLKQM-PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM---IRSGHNLDFTM 439
A + ++M + CLPN ++Y+T+I GLC A ++DR I G +
Sbjct: 412 EACRVYRKMLEEPGCLPNSITYSTLITGLCNA--------GMLDRARGYIEKGCVPNIGT 463
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+ + + E+ ++ +MV +
Sbjct: 464 YNLLIDAFRKANRDEDARELLDDMVQR 490
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 7/205 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK-VFD 218
++ SL+ L R N + A ++ +++ P V TY T++ GYC+ +E A+K + +
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSC-SPTVYTYNTILDGYCRANQLEEARKFMLE 351
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
M PN++++N MI G CK EA + + E R C P+ + Y +I GLC +VD
Sbjct: 352 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVD 411
Query: 279 EAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA + KM G N T+ +++ GLC G D+A GY+ E P++ +Y ++
Sbjct: 412 EACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNIGTYNLL 467
Query: 338 INGFCKIGKSDEAISLLKEMRARGL 362
I+ F K + ++A LL +M RG
Sbjct: 468 IDAFRKANRDEDARELLDDMVQRGF 492
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S+N ++ L +VN A E + + PDV YTT+I G C+ ++ A +V+
Sbjct: 361 SFNIMIRGLCKVNRSSEAMELVEE-ARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419
Query: 220 MTVKP----NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M +P N + Y+T+I G C G L+ A+ + +GC PN TYN +I
Sbjct: 420 MLEEPGCLPNSITYSTLITGLCNAGMLDRARG----YIEKGCVPNIGTYNLLIDAFRKAN 475
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHK 300
R ++A+ L+ M GF V +H+
Sbjct: 476 RDEDARELLDDMVQRGF-GGVQSHQ 499
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 177/306 (57%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ + +V + A + + ++V + + PDV TY +I G+C +G +++A +F+ M
Sbjct: 215 YNTIIDSMCKVKLVNEAFDLYSEMVSKGI-SPDVVTYNALISGFCIVGKMKDATDLFNKM 273
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN+ +N +++GFCK+ L+EAK + MM +G +P+ TYN+++ C+ V
Sbjct: 274 IFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEV 333
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
++AK + + G N+ ++ M+ G C + K D+A+ + + N+ PDV +Y +
Sbjct: 334 NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSL 393
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G CK+GK A+ L+ EM RG+ ++N++ L +N ++D+AI LL +M
Sbjct: 394 IDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ +Y T++ GLC GR++D + + ++ G+ LD +Y+ +++G+C G + +
Sbjct: 454 QPDICTYTTLVDGLC-KNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESL 512
Query: 458 QIAHEM 463
+ +M
Sbjct: 513 DLLSKM 518
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G +K A F++ +Y++N L+ + +K A+ ++K+
Sbjct: 253 LISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQG 312
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ PDV TY +++ YC + + AK +F+ ++ V PN+ +Y+ MI+GFCK +++EA
Sbjct: 313 I-KPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEA 371
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
EM P+ +TYN++I GLC G++ A L+ +M G + T+ S+L
Sbjct: 372 MNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDA 431
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + D+A+ L + + + PD+ +Y +++G CK G+ ++A + +++ +G
Sbjct: 432 LCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILD 491
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V + A+ + +G D ++ LL +M + C+PN V+Y IIC L K E L+
Sbjct: 492 VNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSL-FDKDENDKAEKLL 550
Query: 426 DRMIRSG 432
MI G
Sbjct: 551 REMITRG 557
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 138/257 (53%), Gaps = 4/257 (1%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
++ A ++K K F + L+ Y V A F+ Q ++SY+ ++
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPN 225
++ + A F ++ N++P DV TY ++I G CK+G I A K+ D M V +
Sbjct: 363 CKIKKVDEAMNLFKEMHCNNIIP-DVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHD 421
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+ YN++++ CK ++++A + +M + G +P+ TY ++ GLC NGR+++A+++
Sbjct: 422 KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFE 481
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+ + G+ +V+ + +M++G C G FD+++ L + E P+ +YE++I
Sbjct: 482 DLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKD 541
Query: 346 KSDEAISLLKEMRARGL 362
++D+A LL+EM RGL
Sbjct: 542 ENDKAEKLLREMITRGL 558
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 137/288 (47%), Gaps = 28/288 (9%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN-----GRV 277
KP++ + ++ K ++R N +T + +I + IN G+
Sbjct: 69 KPSIFQFGKILGSLVKSNHYSTVVS-----LHRQMEFNGITSDLVILSILINCFSQLGQN 123
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+ ++AK+ G++ NV T +++KGLC+ G+ QA+ + V+ + + SY +
Sbjct: 124 PLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTL 183
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
ING CK+G++ A+ LL+ + + ++P V +N + + + ++ A L +M
Sbjct: 184 INGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGI 243
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ V+YN +I G C+ G+M+D DL ++MI N + ++ L+ G+C+E
Sbjct: 244 SPDVVTYNALISGFCIV-GKMKDATDLFNKMIFENINPNVYTFNILVDGFCKE------- 295
Query: 458 QIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQV 505
RL + KN L ++ + + T S + R+ V +V
Sbjct: 296 ----------RRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEV 333
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 179/323 (55%), Gaps = 8/323 (2%)
Query: 150 KQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ ++NG ++SYN++L + N ++ A Q+V PPDV +YTT+I G CK+
Sbjct: 69 EMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGC-PPDVVSYTTVINGLCKL 127
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
++ A +V D M +PN++ Y T+++GFC+ G+L+ A + + +M RG RPN +TY
Sbjct: 128 DQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITY 187
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
N +++GLC ++D A L +M +G +V T+ +++ L GK D A + ++
Sbjct: 188 NNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMV 247
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+P+V +Y +++G CK GK DEA +LL+ M G P + ++N + + G +D
Sbjct: 248 SKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRID 307
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A LL++M C PN V+Y ++ C G+ +D LV+ M+ G+ + Y+ L
Sbjct: 308 EAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC-GKAEDAIGLVEVMVEKGYVPNLFTYNSL 366
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
L +C++ VE Q+ M+ K
Sbjct: 367 LDMFCKKDEVERACQLLSSMIQK 389
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 171/308 (55%), Gaps = 7/308 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+ S+L L A F ++ K PPD TY TMI G K +++A ++ + M
Sbjct: 13 HKSILRGLCDAGQCSDAVLHFREMSK--TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEM 70
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
PN+ +YNT+++GFCK +E A + +M+ RGC P+ ++Y +I GLC +V
Sbjct: 71 VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQV 130
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DEA +M KM G + NV T+ +++ G C VG D AV +R + E P+ +Y +
Sbjct: 131 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 190
Query: 338 INGFCKIGKSDEAISLLKEMRARG-LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++G C K D A+ L KEM G P VF+++ + LV++G++D A L++ M
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG 250
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C PN V+Y++++ GLC A G++ + L+ RM RSG + + Y+ ++ G+C+ G ++
Sbjct: 251 CSPNVVTYSSLLHGLCKA-GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309
Query: 457 MQIAHEMV 464
+ EMV
Sbjct: 310 YHLLEEMV 317
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 180/308 (58%), Gaps = 10/308 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ RV + A E ++ E P+ TY ++ G C +++A ++F
Sbjct: 151 TYGTLVDGFCRVGDLDGAVELVRKMT-ERGYRPNAITYNNIMHGLCSGRKLDSALQLFKE 209
Query: 220 M----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + P++ Y+T+++ K G++++A + + M+++GC PN +TY+++++GLC G
Sbjct: 210 MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAG 269
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++DEA L+ +M +G N+ T+ +++ G C +G+ D+A L +++ P+V +Y
Sbjct: 270 KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 329
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
V+++ FCK GK+++AI L++ M +G P +F++N++ + + E++RA LL M Q
Sbjct: 330 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 389
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C+PN VSYNT+I GLC A + V L+++M+ + D ++ ++ C+ V+
Sbjct: 390 GCVPNVVSYNTVIAGLCKATKVHEGVL-LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVD- 447
Query: 456 VMQIAHEM 463
IA+E+
Sbjct: 448 ---IAYEL 452
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 170/312 (54%), Gaps = 4/312 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ L + A + F ++ + PPDV TY+T++ K G +++A ++ +
Sbjct: 186 TYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEA 245
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ Y+++++G CK G+L+EA + M GC PN +TYN +I G C GR
Sbjct: 246 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 305
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEA L+ +M G + NV T+ +L C GK + A+G + ++E P++ +Y
Sbjct: 306 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 365
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++ FCK + + A LL M +G P V S+N V L + ++ +LLL+QM +
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C+P+ V++NTII +C R+ +L + + SG + Y+ L+ G C+ +
Sbjct: 426 CVPDIVTFNTIIDAMCKTY-RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 484
Query: 457 MQIAHEMVTKKG 468
+ EM K+G
Sbjct: 485 EYLLREMTRKQG 496
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 212/431 (49%), Gaps = 28/431 (6%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSDFFI--SKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ I D L+ + A L++ S S + S L+ G + A +
Sbjct: 223 YSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 282
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +YN+++ ++ I A ++V + P+V TYT ++ +CK G
Sbjct: 283 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV-DGGCQPNVVTYTVLLDAFCKCGKA 341
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
E+A + +VM K PNL YN++++ FCKK E+E A + ++ M+ +GC PN ++YN +
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 401
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC +V E +L+ +M N ++ T +++ +C + D A + E+
Sbjct: 402 IAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGC 461
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAI 386
P++ +Y +++G CK + D+A LL+EM R +G P + ++N V L ++ +DRA
Sbjct: 462 TPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAY 521
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L QM P+ V+Y+ +I LC + M + ++++ M+++G + Y L+ G
Sbjct: 522 KLFLQMLSDGLAPDDVTYSIVISSLCKWR-FMDEANNVLELMLKNGFDPGAITYGTLIDG 580
Query: 447 YCEEGNVENVMQIAH------------------EMVTKKGRLLKLKNFLTRVVDALLLMW 488
+C+ GN++ ++I + ++K+GRL + L ++ A L+
Sbjct: 581 FCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPD 640
Query: 489 IVTGGSWISRF 499
VT + + F
Sbjct: 641 TVTYNTLLKGF 651
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 173/320 (54%), Gaps = 9/320 (2%)
Query: 153 ENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
E+G+C +++Y++++ LV+ + A +V + P+V TY++++ G CK G
Sbjct: 212 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGC-SPNVVTYSSLLHGLCKAGK 270
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
++ A + MT PN++ YNT+I+G CK G ++EA + EM++ GC+PN +TY
Sbjct: 271 LDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 330
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
++ C G+ ++A L+ M G+ N+ T+ S+L C + ++A L ++++
Sbjct: 331 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 390
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
P+V SY VI G CK K E + LL++M + P + +FN + + + +D A
Sbjct: 391 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 450
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR-SGHNLDFTMYSCLLK 445
L + + C PN V+YN+++ GLC ++ R E L+ M R G + D Y+ ++
Sbjct: 451 ELFNLIQESGCTPNLVTYNSLVHGLCKSR-RFDQAEYLLREMTRKQGCSPDIITYNTVID 509
Query: 446 GYCEEGNVENVMQIAHEMVT 465
G C+ V+ ++ +M++
Sbjct: 510 GLCKSKRVDRAYKLFLQMLS 529
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 168/310 (54%), Gaps = 6/310 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L++YNSLL + + + ++ A + ++++ VP +V +Y T+I G CK + +
Sbjct: 360 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP-NVVSYNTVIAGLCKATKVHEGVLLL 418
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M P+++ +NT+I+ CK ++ A + N + GC PN +TYN++++GLC +
Sbjct: 419 EQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKS 478
Query: 275 GRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
R D+A+ L+ +M R G ++ T+ +++ GLC + D+A ++ + PD +
Sbjct: 479 RRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVT 538
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +VI+ CK DEA ++L+ M G P ++ + + G LD+A+ +L+ +
Sbjct: 539 YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL 598
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
P+ V+++ I L +GR++ +L++ M+R+G D Y+ LLKG+C+
Sbjct: 599 SKGSYPDVVTFSIFIDWL-SKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRT 657
Query: 454 ENVMQIAHEM 463
E+ + + M
Sbjct: 658 EDAVDLFEVM 667
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 151/288 (52%), Gaps = 5/288 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N+++ + + + +A E F+ +++E+ P++ TY +++ G CK + A+ +
Sbjct: 430 IVTFNTIIDAMCKTYRVDIAYELFN-LIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLL 488
Query: 218 DVMTVK----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
MT K P+++ YNT+I+G CK ++ A K +M++ G P+++TY+ +I LC
Sbjct: 489 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 548
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+DEA ++ M NGF T+ +++ G C G D+A+ L+ ++ PDV +
Sbjct: 549 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 608
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+ + I+ K G+ +A LL+ M GL P ++N + + + + A+ L + M
Sbjct: 609 FSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMR 668
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
Q C P+ +Y T++ L K + ++ M+ +G L+ + S
Sbjct: 669 QCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSS 716
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 2/183 (1%)
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M G K + HKS+L+GLC G+ AV + R M PD +Y +ING K +
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFRE-MSKTCPPDSVTYNTMINGLSKSDR 59
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
D+AI LL+EM G P VFS+N V + ++ A+ LL+QM C P+ VSY T
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+I GLC ++ + ++D+MI+ G + Y L+ G+C G+++ +++ +M +
Sbjct: 120 VINGLCKLD-QVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178
Query: 467 KGR 469
R
Sbjct: 179 GYR 181
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 190/371 (51%), Gaps = 7/371 (1%)
Query: 104 SHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNS 163
S+S I + S+L + + + L+ AY G + A+ F +A S N
Sbjct: 140 SNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNP 199
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV- 222
+L LV+ I + E + ++++ + +V T+ +I G CK+G + A V + M
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRI-GVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAW 258
Query: 223 --KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
P+++ YNT+I+G+CK G++ +A + EM+ + PNE+T+N +I G C + V A
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
K + +M+ G + NV T+ S++ GLC GK D+A+G + + P+V +Y +ING
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
FCK EA +L ++ RGL P V +FN + + G +D A LL M PN
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+YN +I G C +G +++ L M +G D Y+ L+ C++G +++
Sbjct: 439 VSTYNCLIVGFC-REGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497
Query: 461 HEM--VTKKGR 469
EM + KKGR
Sbjct: 498 DEMTLMEKKGR 508
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 151/269 (56%), Gaps = 8/269 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ R ++ A++ F ++ ++ + P+V TY ++I G C G ++ A + D
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGL-QPNVVTYNSLINGLCSNGKLDEALGLQDK 359
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ +KPN++ YN +INGFCKK L+EA++ ++++ RG PN +T+N +I GR
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D+A +L + M G NVST+ ++ G C G +A + + + D+ +Y +
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479
Query: 337 VINGFCKIGKSDEAISLLKEM---RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+++ CK G++ +A+ LL EM +G + + ++N + + G+L+ A LL +M
Sbjct: 480 LVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML 539
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+ +PN +Y+ I+ M KG + D++
Sbjct: 540 EKGLIPNRTTYD-ILRDEMMEKGFIPDID 567
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
V P+VSTY +I G+C+ G ++ A+K+ M +K +L+ YN +++ CKKGE +A
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494
Query: 247 KCMNEMM---NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+ ++EM +G R N +TYN +I G C G+++EA L+ +M G N +T+ +
Sbjct: 495 RLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILR 554
Query: 304 KGLCVVGKFDQAVGYLRNV 322
+ G G+L NV
Sbjct: 555 DEMMEKGFIPDIDGHLYNV 573
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 80/147 (54%), Gaps = 11/147 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI AYG G + A + ++ ++ G C + +YN L+ R ++K A + ++ +
Sbjct: 410 LIDAYGKAGRMDDA--FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEM-E 466
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV------KPNLLAYNTMINGFCKKG 240
N + D+ TY ++ CK G A ++ D MT+ + N++ YN +I GFC KG
Sbjct: 467 GNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKG 526
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAM 267
+LEEA + +NEM+ +G PN TY+ +
Sbjct: 527 KLEEANRLLNEMLEKGLIPNRTTYDIL 553
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 177/311 (56%), Gaps = 9/311 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+LL L + A+ + +++K PDV TY T++ G+CK+G ++ A K+FD
Sbjct: 12 TYNALLSGLCNGGRMSDAQALYERMIKAGY-SPDVVTYNTLLHGFCKVGELDEALKIFDG 70
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ P+++ YN +INGFCK +L+EA++ + M++ P+ +TYN+++ GLC NGR
Sbjct: 71 AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGR 130
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC-VVGKFDQAVGYLRNVMEANMNPDVKSYE 335
VDEA+ML+ GF NV T+ +++ GLC + +A+ +V++ P+V +Y
Sbjct: 131 VDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYN 187
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++I+G K + +EA L + GL+P ++ L + G ++ A+L+LK M +
Sbjct: 188 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 247
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C+P+ VS+N +I GLC K R+ + E L+ M G + + ++ L+ G C G +
Sbjct: 248 GCVPDVVSHNAVINGLCKEK-RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 306
Query: 456 VMQIAHEMVTK 466
M EM+ +
Sbjct: 307 AMTTFKEMLKR 317
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 165/310 (53%), Gaps = 4/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + + + A+ ++V EN+VP DV TY +++ G CK G ++ A+ +
Sbjct: 82 TYNALINGFCKADKLDEAQRILQRMVSENLVP-DVVTYNSLVNGLCKNGRVDEARMLIVD 140
Query: 220 MTVKPNLLAYNTMINGFCKK-GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
PN++ Y+T+I+G C++ + EA K ++ +G P TYN +I GL RV+
Sbjct: 141 KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVN 200
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EA L + + +G + + T+ + GLC G+ + A+ L+++ E PDV S+ VI
Sbjct: 201 EAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVI 260
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG CK + DEA LL M A+G P SFN + G+ +A+ K+M +
Sbjct: 261 NGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK 320
Query: 399 PNFVSYNTIICGLCMAK--GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P V+YN ++ GLC A+ GR+++ L D MI G D YS L+ G + G +++
Sbjct: 321 PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDA 380
Query: 457 MQIAHEMVTK 466
++ M K
Sbjct: 381 RRLLGAMEAK 390
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 160/292 (54%), Gaps = 9/292 (3%)
Query: 160 SYNSLLGVLVR-VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+Y++L+ L R + + A + F ++K+ P+V TY +I G K + A ++F
Sbjct: 149 TYSTLISGLCRELRGVSEALKLFGSVLKQGY-EPEVPTYNILIDGLLKEDRVNEAFELFS 207
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ ++P+ + Y I+G CK G +E+A + +M +GC P+ +++NA+I GLC
Sbjct: 208 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEK 267
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
RVDEA++L++ M G N + +++ G C GK+ +A+ + +++ + P V +Y
Sbjct: 268 RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYN 327
Query: 336 VVINGFCKI---GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
++++G CK G+ EAI+L M +G P V +++A+ L + G+LD A LL M
Sbjct: 328 ILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM 387
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
C+PN +YN++I GLC + ++ + +L M+ G D Y ++
Sbjct: 388 EAKGCIPNVYTYNSLISGLCGLE-KVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 115/213 (53%), Gaps = 3/213 (1%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M G PN +TYNA++ GLC GR+ +A+ L +M G+ +V T+ ++L G C VG+
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+A+ ++ PDV +Y +INGFCK K DEA +L+ M + L P V ++N+
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L +NG +D A +L+ PN ++Y+T+I GLC + + L +++
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFS---PNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G+ + Y+ L+ G +E V ++ +V
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLV 210
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 126/244 (51%), Gaps = 5/244 (2%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN + YN +++G C G + +A+ M+ G P+ +TYN +++G C G +DEA +
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
GF +V T+ +++ G C K D+A L+ ++ N+ PDV +Y ++NG CK
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV-ENGELDRAILLLKQMPQMDCLPNFV 402
G+ DEA L+ + +G P V +++ + L E + A+ L + + P
Sbjct: 128 NGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YN +I GL + + R+ + +L +++ G D Y+ + G C+ G VE+ + + +
Sbjct: 185 TYNILIDGL-LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKD 243
Query: 463 MVTK 466
M K
Sbjct: 244 MDEK 247
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 25/269 (9%)
Query: 88 YHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLS--------DFFISKLIKAYGDRGNV 139
Y P Y + D LL ++ A L K FI L KA G V
Sbjct: 179 YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA----GRV 234
Query: 140 KAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
+ A+ K ++ C+ S+N+++ L + + AE + + P +S
Sbjct: 235 EDALLML---KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAIS- 290
Query: 197 YTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCK---KGELEEAKKCMN 250
+ T+I G C+ G + A F M VKP ++ YN +++G CK +G ++EA +
Sbjct: 291 FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 350
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M+ +G P+ +TY+A+I GL G++D+A+ L+ M G NV T+ S++ GLC +
Sbjct: 351 AMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLE 410
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
K D+A+ ++E PD +Y +I+
Sbjct: 411 KVDEALELFVAMVEKGCVPDTITYGTIIS 439
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 164/284 (57%), Gaps = 1/284 (0%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGEL 242
+I++++ PDV TY +I GYCK G I +A ++ D M+V P+++ YNT++ C G+L
Sbjct: 169 EILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKL 228
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+EA + ++ M R C P+ +TY +I C V +A L+ +MR G K +V T+ +
Sbjct: 229 KEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVL 288
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G+C G+ D+A+ +L ++ P+V ++ +++ C G+ +A L EM +G
Sbjct: 289 INGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGC 348
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P+V +FN + L G + RAI +L++MPQ C PN +SYN ++ LC K +M+
Sbjct: 349 SPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDK-KMERAI 407
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +D M+ G D Y+ LL C++G V+ ++I +++ +K
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSK 451
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 191/393 (48%), Gaps = 21/393 (5%)
Query: 87 KYHHTTPCYTAITDVLLSHSLI------------SIAASLLKNSNKLSDFFI-SKLIKAY 133
K+ C I D++ SLI + +L++S + D + LI Y
Sbjct: 131 KFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGY 190
Query: 134 GDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
G + +A+ + + + +YN++L L +K A E + ++ P D
Sbjct: 191 CKTGEIGSALQLLDRMSVSPD---VVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYP-D 246
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMN 250
V TYT +I CK + A K+ D M KP+++ YN +ING CK+G L+EA + +N
Sbjct: 247 VITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLN 306
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M + GC+PN +T+N ++ +C GR +A+ +A+M G +V T ++ LC G
Sbjct: 307 HMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKG 366
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+A+ L + + P+ SY +++ CK K + AI L M +RG P + ++N
Sbjct: 367 LIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYN 426
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ L ++G++D A+ +L Q+ C P ++YNT+I GL G+ D L+D M
Sbjct: 427 TLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKV-GKTDDAIKLLDEMKG 485
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G D YS L+ G EG V+ + H++
Sbjct: 486 KGLKPDIITYSTLVGGLSREGKVDEAIAFFHDL 518
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 165/310 (53%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ + + + A F + + P+V T+ ++R C G +A+K
Sbjct: 284 TYNVLINGICKEGRLDEAIRFLNHMPSYGC-QPNVITHNIILRSMCSTGRWMDAEKFLAE 342
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ +N +IN C+KG + A + +M GC PN L+YN +++ LC + +
Sbjct: 343 MIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKK 402
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ A + M G ++ T+ ++L LC GK D AV L + +P + +Y
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNT 462
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G K+GK+D+AI LL EM+ +GLKP + +++ + L G++D AI + +M
Sbjct: 463 VIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMG 522
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN ++YN+I+ GLC A+ ++ + D + M+ G T Y L++G EG +
Sbjct: 523 VKPNAITYNSIMLGLCKARQTVRAI-DFLAYMVARGCKPTETSYMILIEGLAYEGLAKEA 581
Query: 457 MQIAHEMVTK 466
+++ +E+ ++
Sbjct: 582 LELLNELCSR 591
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 138/266 (51%), Gaps = 7/266 (2%)
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+R + G +E K + M + P+++A ++I G CK G+ +A + M + + G
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +TYN +I G C G + A L+ +M ++ +V T+ ++L+ LC GK +A+
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAME 233
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L M+ PDV +Y ++I CK +A+ LL EMR +G KP V ++N + +
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G LD AI L MP C PN +++N I+ +C + GR D E + MIR G +
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMC-STGRWMDAEKFLAEMIRKGCSPSV 352
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
++ L+ C +G + + + +M
Sbjct: 353 VTFNILINFLCRKGLIGRAIDVLEKM 378
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 113/206 (54%), Gaps = 4/206 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL L + ++ A E+ +V P D+ TY T++ CK G ++ A ++ +
Sbjct: 389 SYNPLLHALCKDKKMERAIEYLDIMVSRGCYP-DIVTYNTLLTALCKDGKVDVAVEILNQ 447
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ K P L+ YNT+I+G K G+ ++A K ++EM +G +P+ +TY+ ++ GL G+
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGK 507
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA + G K N T+ S++ GLC + +A+ +L ++ P SY +
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMI 567
Query: 337 VINGFCKIGKSDEAISLLKEMRARGL 362
+I G G + EA+ LL E+ +RG+
Sbjct: 568 LIEGLAYEGLAKEALELLNELCSRGV 593
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 105/203 (51%), Gaps = 4/203 (1%)
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
E+ N + L NG ++E + M G ++ S+++GLC GK +A +
Sbjct: 110 EVENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVME 169
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ ++ PDV +Y V+I+G+CK G+ A+ LL M + P V ++N + R L ++G
Sbjct: 170 ILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSG 226
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+L A+ +L + Q +C P+ ++Y +I C G Q ++ L+D M G D Y
Sbjct: 227 KLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMK-LLDEMRDKGCKPDVVTY 285
Query: 441 SCLLKGYCEEGNVENVMQIAHEM 463
+ L+ G C+EG ++ ++ + M
Sbjct: 286 NVLINGICKEGRLDEAIRFLNHM 308
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 99/184 (53%), Gaps = 4/184 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YN+LL L + + +A E +Q+ + P + TY T+I G K+G ++A K+
Sbjct: 422 IVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLI-TYNTVIDGLSKVGKTDDAIKLL 480
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +KP+++ Y+T++ G ++G+++EA +++ G +PN +TYN+++ GLC
Sbjct: 481 DEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKA 540
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+ A +A M G K +++ +++GL G +A+ L + + +
Sbjct: 541 RQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAE 600
Query: 335 EVVI 338
+VV+
Sbjct: 601 QVVV 604
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 12/183 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV----NSIKLAEEFFHQI 184
L+ A G V A+ +Q L +YN+++ L +V ++IKL +E
Sbjct: 428 LLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDE----- 482
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGE 241
+K + PD+ TY+T++ G + G ++ A F + M VKPN + YN+++ G CK +
Sbjct: 483 MKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQ 542
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
A + M+ RGC+P E +Y +I GL G EA L+ ++ G S +
Sbjct: 543 TVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQV 602
Query: 302 MLK 304
++K
Sbjct: 603 VVK 605
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 189/349 (54%), Gaps = 42/349 (12%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAK 214
+ +Y++N ++ VL + +K A++F + EN+ V P+V TY T+I GYC G +E A+
Sbjct: 234 STVYTFNIMINVLCKEGKLKKAKDFIGSM--ENLGVKPNVVTYNTVIHGYCSRGRVEGAR 291
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
V D+M V+P+ Y ++I+G CK G+LEEA + +M G P +TYN +I G
Sbjct: 292 MVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGY 351
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G + +A +M VST+ ++ L + GK D+A G ++++ ++ + PD
Sbjct: 352 CNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDS 411
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE------------- 378
+Y ++ING+C+ G + +A +L EM ++G++PT+ ++ ++ +L +
Sbjct: 412 ITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEK 471
Query: 379 ----------------------NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
NG LDRA LLK+M + + +P+ V+YNT++ G C +G
Sbjct: 472 IIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRC-REG 530
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
++++ +L+ M R G D Y+ L+ GY + G++ + I EM++
Sbjct: 531 KVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLS 579
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 163/311 (52%), Gaps = 13/311 (4%)
Query: 160 SYNSLLGVLVRVNSIK----LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
++N++L + +++N + L E F +K V T+ MI CK G ++ AK
Sbjct: 203 TFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVY-----TFNIMINVLCKEGKLKKAKD 257
Query: 216 VFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
M VKPN++ YNT+I+G+C +G +E A+ ++ M NRG P+ TY ++I G+C
Sbjct: 258 FIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMC 317
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G+++EA ++ KM+ G T+ +++ G C G +A GY ++ + P V
Sbjct: 318 KGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVS 377
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y ++I+ GK DEA ++K+M G+ P ++N + G +A L +M
Sbjct: 378 TYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
P V+Y ++I L + RM+ +DL +++IR G + D M++ L+ G+C GN
Sbjct: 438 ISKGIQPTLVTYTSLIYVLS-KRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGN 496
Query: 453 VENVMQIAHEM 463
++ + EM
Sbjct: 497 LDRAFALLKEM 507
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 163/322 (50%), Gaps = 7/322 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G ++ A + K+I +YN+L+ + A + ++V+
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
++P VSTY +I G ++ A + M + P+ + YN +ING+C+ G ++A
Sbjct: 372 ILPT-VSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKA 430
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+EM+++G +P +TY ++IY L R+ A L K+ G ++ +++ G
Sbjct: 431 FNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDG 490
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G D+A L+ + + N+ PD +Y ++ G C+ GK +EA LLKEM+ RG++P
Sbjct: 491 HCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPD 550
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV-EDL 424
S+N + + G+++ A + +M + P ++YN +I GLC K + D+ E+L
Sbjct: 551 HISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLC--KNQQGDLAEEL 608
Query: 425 VDRMIRSGHNLDFTMYSCLLKG 446
+ M+ G D + Y L++G
Sbjct: 609 LKEMVSKGITPDDSTYFSLIEG 630
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 153/304 (50%), Gaps = 14/304 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y ++G++ A + + + + +YN L+ L + A+ +
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT------VKPNLLAYNTMINGFCKKGEL 242
+VP D TY +I GYC+ G NAKK F++ ++P L+ Y ++I K+ +
Sbjct: 407 IVP-DSITYNILINGYCRCG---NAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRM 462
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ A +++ G P+ + +NA+I G C NG +D A L+ +M + T+ ++
Sbjct: 463 KAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTL 522
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
++G C GK ++A L+ + + PD SY +I+G+ K G ++A ++ EM + G
Sbjct: 523 MQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGF 582
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
PT+ ++NA+ + L +N + D A LLK+M P+ +Y ++I G+ G++ D
Sbjct: 583 NPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI----GKVDDSS 638
Query: 423 DLVD 426
+ D
Sbjct: 639 EASD 642
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 149/302 (49%), Gaps = 9/302 (2%)
Query: 170 RVNSIKLAEEFFHQ--IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---P 224
RV +K + FH+ I ++ + + +IR C++ ++A + FD+M K P
Sbjct: 143 RVAGVK---DVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVP 199
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+ +N M++ F K + E EM + T+N MI LC G++ +AK +
Sbjct: 200 KIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFI 259
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G K NV T+ +++ G C G+ + A L + + PD +Y +I+G CK
Sbjct: 260 GSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKG 319
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
GK +EA +L++M+ GL PT ++N + G+L +A +M + LP +Y
Sbjct: 320 GKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTY 379
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
N +I L + +G+M + + ++ M SG D Y+ L+ GYC GN + + EM+
Sbjct: 380 NLLIHALFL-EGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMI 438
Query: 465 TK 466
+K
Sbjct: 439 SK 440
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 184/345 (53%), Gaps = 40/345 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N ++ + R+ + A E F +I N P D TY+T++ G CK I+ A + D
Sbjct: 172 TFNLVIKAMCRLGLVDKAIEVFREIPLRNCAP-DNYTYSTLMHGLCKEERIDEAVSLLDE 230
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V+ PNL+A+N +I+ CKKG+L A K ++ M +GC PNE+TYNA+++GLC+ G+
Sbjct: 231 MQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGK 290
Query: 277 VDEAKMLMAKM--------------RLNGF---------------------KDNVSTHKS 301
+++A L+ +M +NGF + N + S
Sbjct: 291 LEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSS 350
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GLC GKF+QA+ + ++ P+ Y +I+G C+ GK DEA L EM+ +G
Sbjct: 351 LISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKG 410
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P F+++++ R E G+ +AIL+ K+M +C+ N V Y+ +I GLC G+ +
Sbjct: 411 YLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLC-KDGKFMEA 469
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +M+ G LD YS ++ G+C VE +++ ++M+ +
Sbjct: 470 LMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQ 514
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 177/388 (45%), Gaps = 42/388 (10%)
Query: 118 SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLA 177
S KL D LI+++ + ++ HQ K+ ++ + + + + A
Sbjct: 56 SYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKA 115
Query: 178 EEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD------VMTVKPNLLAYNT 231
+ FH++ E V ++ +++ + G+ A + ++ + + PN L +N
Sbjct: 116 VDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNL 175
Query: 232 MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR--- 288
+I C+ G +++A + E+ R C P+ TY+ +++GLC R+DEA L+ +M+
Sbjct: 176 VIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEG 235
Query: 289 --------------------------------LNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
L G N T+ +++ GLC+ GK ++AV
Sbjct: 236 TFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAV 295
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
L ++ P+ ++ +INGF G++ + +L + ARG + + ++++ L
Sbjct: 296 SLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGL 355
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ G+ ++A+ L K+M C PN + Y+ +I GLC +G++ + + M G+ +
Sbjct: 356 CKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLC-REGKLDEARGFLSEMKNKGYLPN 414
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMV 464
YS L++GY E G+ + + EM
Sbjct: 415 SFTYSSLMRGYFEAGDSHKAILVWKEMA 442
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 188/438 (42%), Gaps = 60/438 (13%)
Query: 41 ISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITD 100
++S+ L+ L N+V K + A+ F N P+ Y Y+ +
Sbjct: 159 VASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNY-----TYSTLMH 213
Query: 101 VLLSHSLISIAASLLKNSNKLSDF----FISKLIKAYGDRGNVKAAIFWFHQAKQIEN-- 154
L I A SLL F + LI A +G++ A AK ++N
Sbjct: 214 GLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRA------AKLVDNMF 267
Query: 155 -GACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS--------------- 195
C+ +YN+L+ L ++ A +Q+V VP DV+
Sbjct: 268 LKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRAS 327
Query: 196 -------------------TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMI 233
Y+++I G CK G A +++ M K PN + Y+ +I
Sbjct: 328 DGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALI 387
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G C++G+L+EA+ ++EM N+G PN TY++++ G G +A ++ +M N
Sbjct: 388 DGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCI 447
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
N + ++ GLC GKF +A+ + ++ + DV +Y +I+GFC ++ + L
Sbjct: 448 HNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKL 507
Query: 354 LKEMRARG--LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+M +G ++P V ++N + + RAI +L M C P+F++ + + L
Sbjct: 508 FNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTL 567
Query: 412 CMAKGRMQDVEDLVDRMI 429
QD + +D ++
Sbjct: 568 RENMNPPQDGREFLDELV 585
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 94/178 (52%), Gaps = 4/178 (2%)
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA---NMNPDVKSYEVVINGFCKIGKSDE 349
K V + S+L + G F++A+ + +V+ + N++P+ ++ +VI C++G D+
Sbjct: 129 KQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDK 188
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
AI + +E+ R P ++++ + L + +D A+ LL +M PN V++N +I
Sbjct: 189 AIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLIS 248
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
LC KG + LVD M G + Y+ L+ G C +G +E + + ++MV+ K
Sbjct: 249 ALC-KKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNK 305
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 171/308 (55%), Gaps = 5/308 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y YN+++ +L + + AE+ + K V P +V YTT+I G+CK+G + A K+FD
Sbjct: 313 YIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV-VYTTVISGFCKLGNVSAACKLFD 371
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P+++ Y ++I+G CK G++ EA++ NEM+ +G P+E+TY A+I G C G
Sbjct: 372 EMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAG 431
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ EA + +M G NV T+ ++ GLC G+ D A L + + P+V +Y
Sbjct: 432 EMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYN 491
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++NG CKIG ++ + L++EM G P ++ + + GE+ +A LL+ M
Sbjct: 492 TIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNK 551
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P V++N ++ G CM+ G ++D E L++ M+ G + T ++ L+K YC + N+
Sbjct: 552 RLQPTLVTFNVLMNGFCMS-GMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRA 610
Query: 456 VMQIAHEM 463
+I M
Sbjct: 611 TTEIYKAM 618
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 202/405 (49%), Gaps = 16/405 (3%)
Query: 85 PNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDF----FISKLIKAYGDRGNVK 140
P++Y Y I +L + + A LL+ K F + +I + GNV
Sbjct: 310 PDEY-----IYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVS 364
Query: 141 AAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
AA F + ++ + + +Y S++ + + + A E F++++ + + P +V TYT +
Sbjct: 365 AACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEV-TYTAL 423
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I GYCK G ++ A V + M K PN++ Y + +G CK GE++ A + ++EM +G
Sbjct: 424 IDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGL 483
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
+PN TYN ++ GLC G +++ LM +M L GF + T+ +++ C +G+ +A
Sbjct: 484 QPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHE 543
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
LR ++ + P + ++ V++NGFC G ++ L++ M +G+ P +FN++ +
Sbjct: 544 LLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYC 603
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ + K M +P+ +YN +I G C A+ M++ L M+ G+++
Sbjct: 604 IKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARN-MKEAWFLHKEMVEKGYSVTA 662
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVD 482
Y L++G+ + ++ EM +K L+ K+ VD
Sbjct: 663 ATYDALIRGFYKRKKFVEARKLFEEM--RKHGLVAEKDIYDIFVD 705
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 170/334 (50%), Gaps = 9/334 (2%)
Query: 139 VKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
+K A+ F + ++ G C S N +L L ++ ++ A Q+ P DV +
Sbjct: 223 IKIAVKVFEEFPEL--GVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFP-DVVS 279
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y ++ GYC++G ++ K+ D + +KP+ YN +I CK GE+ EA++ + M
Sbjct: 280 YGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMR 339
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G P+ + Y +I G C G V A L +MR ++ T+ S++ G+C GK
Sbjct: 340 KWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMV 399
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A ++ + PD +Y +I+G+CK G+ EA S+ +M +GL P V ++ A+
Sbjct: 400 EAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALA 459
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L +NGE+D A LL +M + PN +YNTI+ GLC G ++ L++ M +G
Sbjct: 460 DGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKI-GNIEQTVKLMEEMDLAGF 518
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D Y+ L+ YC+ G + ++ M+ K+
Sbjct: 519 YPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 191/437 (43%), Gaps = 69/437 (15%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL--------KNSNKLSDFF 125
FNWA + + ++H T + + ++ + I A L+ + +K F
Sbjct: 99 LFNWAKSQSQQ--QFHPTLESLCIVVHLSVASNDIQTAKRLVFEFCAKPKIDVSKSFHLF 156
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI Y D G+ +F + +ENG L A++ FH+++
Sbjct: 157 TEMLIYTYKDWGS-HPLVFDLYFQVLVENGFVLE-----------------AQKLFHKLL 198
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM--------TVKPNLL---------- 227
+ VV S + R C I+ A KVF+ TV N++
Sbjct: 199 RYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKV 258
Query: 228 --AYNTMIN------------------GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A+N ++ G+C+ GEL++ K ++E+ +G +P+E YN +
Sbjct: 259 REAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNI 318
Query: 268 IYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
I LC NG V EA+ L+ MR G F DNV + +++ G C +G A +
Sbjct: 319 ILLLCKNGEVVEAEQLLRGMRKWGVFPDNV-VYTTVISGFCKLGNVSAACKLFDEMRRKK 377
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PD+ +Y VI+G CK GK EA + EM +GL+P ++ A+ + GE+ A
Sbjct: 378 IVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAF 437
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+ QM Q PN V+Y + GLC G + +L+ M R G + Y+ ++ G
Sbjct: 438 SVHNQMVQKGLTPNVVTYTALADGLC-KNGEIDVANELLHEMSRKGLQPNVYTYNTIVNG 496
Query: 447 YCEEGNVENVMQIAHEM 463
C+ GN+E +++ EM
Sbjct: 497 LCKIGNIEQTVKLMEEM 513
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 160/338 (47%), Gaps = 5/338 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y G +K A +Q Q + +Y +L L + I +A E H++ +
Sbjct: 421 TALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSR 480
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ + P+V TY T++ G CK+G IE K+ + M + P+ + Y T+++ +CK GE+
Sbjct: 481 KGL-QPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMA 539
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + + M+N+ +P +T+N ++ G C++G +++ + L+ M G N +T S++
Sbjct: 540 KAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLM 599
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
K C+ + + + + PD +Y ++I G CK EA L KEM +G
Sbjct: 600 KQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYS 659
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
T +++A+ R + + A L ++M + + Y+ I + +G + +
Sbjct: 660 VTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYD-IFVDVNYEEGNWEITLE 718
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
L D + F +Y C G E N + + AH
Sbjct: 719 LCDEFMTELSGTIFVVYICFFIGGSVESNFDIITFEAH 756
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 173/308 (56%), Gaps = 5/308 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ ++ L + N + A +F ++ K+ VP + TY +I G+CK+ + A +
Sbjct: 9 TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEW-TYNVLINGFCKVHKVHRAYLLLKE 67
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + PN++ Y+T+I+GFC++ +++ A K +M+ GC PN +TYN ++ GLC NG
Sbjct: 68 MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 127
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEA L+ +MR G + + ++ +++ GLC GK D A+ + + PDV +Y
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 187
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK G+ DEA L ++MR +P V +F A+ L + L A +L+ M +
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C PN ++Y+++I GLC G+++D +++ RMI G + Y+ L+ G+C V++
Sbjct: 248 CTPNVITYSSLIDGLC-KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 306
Query: 457 MQIAHEMV 464
+ + EM
Sbjct: 307 LLLMEEMT 314
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 188/358 (52%), Gaps = 5/358 (1%)
Query: 112 ASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
A + K +++ + LI + V A + K+ + +Y++++ R
Sbjct: 31 AKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQ 90
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
+ A + F Q+V EN P++ TY T++ G C+ G+++ A ++ D M ++P+ +
Sbjct: 91 TKVDTAYKLFRQMV-ENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFS 149
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y+T++ G CK G+++ A K + N C P+ + Y+ +I GLC GR+DEA L KMR
Sbjct: 150 YDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMR 209
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
N + +V T +++ GLC + +A L + + N P+V +Y +I+G CK G+
Sbjct: 210 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 269
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A + K M RG++P V ++N++ +D A+LL+++M CLP+ ++YNT+I
Sbjct: 270 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 329
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GLC GR + L M N D YSCL+ G+C+ ++ + +M+ +
Sbjct: 330 DGLC-KTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 386
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 192/380 (50%), Gaps = 15/380 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLS----DFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y + L + L+ A LL + F L+ G + A+ F
Sbjct: 115 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 174
Query: 151 QIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
NG C + +Y++L+ L + + A + F ++ +EN PDV T+T ++ G CK
Sbjct: 175 ---NGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKM-RENSCEPDVVTFTALMDGLCKG 230
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
++ A++V + M + PN++ Y+++I+G CK G++ +A++ M+ RG PN +TY
Sbjct: 231 DRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTY 290
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N++I+G C+ VD A +LM +M G ++ T+ +++ GLC G+ +A ++
Sbjct: 291 NSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA 350
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
NPDV +Y +I GFCK+ + D A +L +M + + P V +F+ + G +D
Sbjct: 351 KFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDD 410
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A LL++M DC P+ +Y +++ G C GRM + ++ RM + G + Y+ L+
Sbjct: 411 AERLLEEMVASDCSPDVYTYTSLVDGFCKV-GRMVEARRVLKRMAKRGCQPNVVTYTALI 469
Query: 445 KGYCEEGNVENVMQIAHEMV 464
+C G ++ EMV
Sbjct: 470 DAFCRAGKPTVAYKLLEEMV 489
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 163/304 (53%), Gaps = 6/304 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L + ++ A+E F +++ + P+V TY ++I G+C +++A + +
Sbjct: 254 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGI-EPNVVTYNSLIHGFCMTNGVDSALLLMEE 312
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT P+++ YNT+I+G CK G EA + +M + C P+ +TY+ +I G C R
Sbjct: 313 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 372
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A+ L M +V T ++++G C G D A L ++ ++ +PDV +Y
Sbjct: 373 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 432
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++GFCK+G+ EA +LK M RG +P V ++ A+ G+ A LL++M
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH-NLDFTMYSCLLKGYCEEGNVEN 455
PN ++Y ++I G C G +++ +++R+ R + D Y ++ G C G +
Sbjct: 493 VQPNVITYRSLIGGFC-GTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSA 551
Query: 456 VMQI 459
+++
Sbjct: 552 ALEL 555
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 156/275 (56%), Gaps = 7/275 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+ L+G ++ I +A F ++K+ V+P DV T++T++ GYC G++++A+++ +
Sbjct: 359 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLP-DVVTFSTLVEGYCNAGLVDDAERLLEE 417
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P++ Y ++++GFCK G + EA++ + M RGC+PN +TY A+I C G+
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV-MEANMNPDVKSYE 335
A L+ +M NG + NV T++S++ G C G ++A L + + N D+ +Y
Sbjct: 478 PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYR 537
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP-Q 394
V+++G C+ G+ A+ LL+ ++ G P + A+ R L + EL +A+ +L++M
Sbjct: 538 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 597
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
PN +Y +I L +GR ++ L D ++
Sbjct: 598 RKSRPNAEAYEAVIQEL-AREGRHEEANALADELL 631
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 132/244 (54%), Gaps = 1/244 (0%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M + N++ + MI+G CK L EA +M +G PNE TYN +I G C +V
Sbjct: 1 MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A +L+ +M+ +G NV T+ +++ G C K D A R ++E P++ +Y +++
Sbjct: 61 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G C+ G DEA LL EMR RGL+P FS++ + L + G++D A+ + + DC P
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ V+Y+T+I GLC GR+ + L ++M + D ++ L+ G C+ ++ Q+
Sbjct: 181 DVVAYSTLIAGLC-KTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 239
Query: 460 AHEM 463
M
Sbjct: 240 LETM 243
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 160/316 (50%), Gaps = 5/316 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YN+L+ L + A F + K PDV TY+ +I G+CK+ I+ A+ +F
Sbjct: 322 IITYNTLIDGLCKTGRAPEANRLFGDM-KAKFCNPDVITYSCLIGGFCKLERIDMARTLF 380
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M V P+++ ++T++ G+C G +++A++ + EM+ C P+ TY +++ G C
Sbjct: 381 DDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKV 440
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+ EA+ ++ +M G + NV T+ +++ C GK A L ++ + P+V +Y
Sbjct: 441 GRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITY 500
Query: 335 EVVINGFCKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+I GFC G +EA +L+ + R K +F++ + L G + A+ LL+ +
Sbjct: 501 RSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIK 560
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
Q P Y +I GLC K + +E L + + + Y +++ EG
Sbjct: 561 QSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRH 620
Query: 454 ENVMQIAHEMVTKKGR 469
E +A E++ KG+
Sbjct: 621 EEANALADELLGNKGQ 636
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/558 (25%), Positives = 250/558 (44%), Gaps = 113/558 (20%)
Query: 5 RRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYE 64
RRSL+ + P S+L + ++R P + + F+ SN++ K
Sbjct: 9 RRSLSTFASSPSDSLLADKALTFLKR------HPYQLHHLSAN-FTPEAASNLLLK---S 58
Query: 65 QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN--SNKLS 122
Q + L F NWA NP+++ T C +L L A L ++ + L
Sbjct: 59 QNDQALILKFLNWA-----NPHQFF-TLRCKCITLHILTKFKLYKTAQILAEDVAAKTLD 112
Query: 123 DFFISKL---------------------IKAYGDRGNVKAAIFWFHQAKQIENGACLYSY 161
D + S + +K+Y + A+ H A+ + SY
Sbjct: 113 DEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSY 172
Query: 162 NSLLGVLVRVN-SIKLAEEFFHQIVKENVVP----------------------------- 191
N++L +R +I AE F ++++ V P
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 232
Query: 192 -----PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
P+V TY T+I GYCK+ I++ K+ M +K PNL++YN +ING C++G ++
Sbjct: 233 TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK 292
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
E + EM RG +E+TYN +I G C G +A ++ A+M +G +V T+ S++
Sbjct: 293 EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352
Query: 304 KGLCVVGKFDQAV----------------------------GY-------LRNVMEANMN 328
+C G ++A+ GY LR + + +
Sbjct: 353 HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS 412
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P V +Y +ING C GK ++AI++L++M+ +GL P V S++ V + ++D A+ +
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
++M + P+ ++Y+++I G C + R ++ DL + M+R G D Y+ L+ YC
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQR-RTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 449 EEGNVENVMQIAHEMVTK 466
EG++E +Q+ +EMV K
Sbjct: 532 MEGDLEKALQLHNEMVEK 549
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 174/365 (47%), Gaps = 56/365 (15%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + + A ++++ + P V TYT++I CK G + A + D
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS-VITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V+ PN Y T+++GF +KG + EA + + EM + G P+ +TYNA+I G C+ G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+++A ++ M+ G +V ++ ++L G C D+A+ R ++E + PD +Y
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I GFC+ ++ EA L +EM GL P F++ A+ G+L++A+ L +M +
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 397 CLPNFVSYNTIICGL--------------------------------------------- 411
LP+ V+Y+ +I GL
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 412 -----CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
CM KG M + + + + M+ H D T Y+ ++ G+C G++ + EMV K
Sbjct: 611 LIKGFCM-KGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV-K 668
Query: 467 KGRLL 471
G LL
Sbjct: 669 SGFLL 673
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 178/434 (41%), Gaps = 94/434 (21%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAE 178
L + + LIK Y GN A+ A+ + +G + +Y SL+ + + ++ A
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVM--HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING 235
EF Q+ + P + TYTT++ G+ + G + A +V M P+++ YN +ING
Sbjct: 366 EFLDQMRVRGLCPNE-RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
C G++E+A + +M +G P+ ++Y+ ++ G C + VDEA + +M G K +
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
T+ S+++G C + +A ++ + PD +Y +IN +C G ++A+ L
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 356 EMRARGLKPTVFSF-------------------------------NAVFRILVEN----- 379
EM +G+ P V ++ + + L+EN
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 380 --------------GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
G + A + + M + P+ +YN +I G C A G ++ L
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA-GDIRKAYTLY 663
Query: 426 DRMIRSGHNLDFTMYSCLLKGY-------------------CE----------------E 450
M++SG L L+K CE E
Sbjct: 664 KEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHRE 723
Query: 451 GNVENVMQIAHEMV 464
GN++ V+ + EM
Sbjct: 724 GNMDVVLDVLAEMA 737
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 167/363 (46%), Gaps = 30/363 (8%)
Query: 95 YTAITDVLLSHSLISIAASLLK--NSNKLSDFFIS--KLIKAYGDRGNVKAAIFWFHQAK 150
YT + D ++ A +L+ N N S ++ LI + G ++ AI K
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + SY+++L R + A ++V E + PD TY+++I+G+C+
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV-EKGIKPDTITYSSLIQGFCEQRRT 501
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A +++ M + P+ Y +IN +C +G+LE+A + NEM+ +G P+ +TY+ +
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 268 IYGLCINGRVDEAKMLMAKMRLN-GFKDNVSTHK--------------SMLKGLCVVGKF 312
I GL R EAK L+ K+ +V+ H S++KG C+ G
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+A +++ N PD +Y ++I+G C+ G +A +L KEM G + A+
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681
Query: 373 FRILVENG---ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ L + G EL+ I+ + + C + ++ + +G M V D++ M
Sbjct: 682 VKALHKEGKVNELNSVIVHVLR----SCELSEAEQAKVLVEINHREGNMDVVLDVLAEMA 737
Query: 430 RSG 432
+ G
Sbjct: 738 KDG 740
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 21/261 (8%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI+ + ++ K A + + ++ ++Y +L+ ++ A + +++V+
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAK----KVFDVMTVKPNLLAYNTMIN-------- 234
+ V+P DV TY+ +I G K AK K+F +V P+ + Y+T+I
Sbjct: 549 KGVLP-DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV-PSDVTYHTLIENCSNIEFK 606
Query: 235 -------GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
GFC KG + EA + M+ + +P+ YN MI+G C G + +A L +M
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+GF + T +++K L GK ++ + +V+ + + + +V++ + G
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNM 726
Query: 348 DEAISLLKEMRARGLKPTVFS 368
D + +L EM G P S
Sbjct: 727 DVVLDVLAEMAKDGFLPNGIS 747
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 220/451 (48%), Gaps = 58/451 (12%)
Query: 92 TPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFH 147
T Y+ + +L + S + A L +K+++ + D F + LI ++ G ++ A WF
Sbjct: 480 TSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ + + +Y +L+ ++ + A E F ++ E +P +V TYT +I G+CK
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP-NVVTYTALIDGHCKS 598
Query: 208 GMIENAKKVF-------DVMTVK------------PNLLAYNTMINGFCKKGELEEAKKC 248
G IE A +++ D+ V PN+ Y +++G CK +++EA+
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ M GC PN + Y+A+I G C G++DEA+M+ KM G+ NV T+ S++ L
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+ D A+ L ++E + P+V Y +I+G CK+GK+DEA L+ M +G P V +
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ A+ + G++D+ + L++QM C PNFV+Y +I C A G + D L+D M
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI-NHCCAAGLLDDAHQLLDEM 837
Query: 429 IRS--------------GHNLDFTM-------------------YSCLLKGYCEEGNVEN 455
++ G N +F + Y L+ +C+ G +E
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLEL 897
Query: 456 VMQIAHEMVTKKGRLLKLKNFLTRVVDALLL 486
+++ EM + K+ + ++++L L
Sbjct: 898 ALELHKEMSSCTSYSAADKDLYSSLIESLSL 928
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 197/502 (39%), Gaps = 94/502 (18%)
Query: 46 LDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSH 105
L QF L +V V+ NP + FF WA Y HT P Y A+ +VL
Sbjct: 120 LRQFREKLNETLVVDVLSLVKNPELGVKFFIWAG----RQIGYGHTGPVYHALLEVLGCG 175
Query: 106 SLISIAASLLKNSNKLSDFFISK----LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSY 161
+ L+ + K LI+ G A+ + K + +Y
Sbjct: 176 GNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTY 235
Query: 162 NSLLGVLVRVNSIKLAEE-------------------FFH------------QIVKENVV 190
N+L+ V + + + A F H ++++
Sbjct: 236 NALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF 295
Query: 191 PPDVSTYTTMIRGYCKMGMIENA-----------------------------------KK 215
D YT MI G C+ + E A K+
Sbjct: 296 KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355
Query: 216 VFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ +M + P+ +N++I+ +C+ G+ A K + +M + GC+P + YN +I G+C
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415
Query: 273 INGRVDE-----------AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
N ++ +ML A + LN K NVS ++ + LC GKF++A +R
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVVLN--KVNVS---NLARCLCGAGKFEKAYSIIRE 470
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+M PD +Y VI C K D A L +EM++ + P VF++ + + G
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
L +A +M + C PN V+Y +I A+ +M +L + M+ G + Y+
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKAR-KMSSANELFEMMLSEGCIPNVVTYT 589
Query: 442 CLLKGYCEEGNVENVMQIAHEM 463
L+ G+C+ G +E QI M
Sbjct: 590 ALIDGHCKSGQIEKACQIYARM 611
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 142/324 (43%), Gaps = 46/324 (14%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y ++ L + + A +F ++ + +P +V TY ++ G + + K++ +M
Sbjct: 302 YTQMISGLCEASLFEEAMDFLSRMRSSSCIP-NVVTYRILLCGCLRKRQLGRCKRILSMM 360
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN--- 274
+ P+ +N++I+ +C+ G+ A K + +M + GC+P + YN +I G+C N
Sbjct: 361 ITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420
Query: 275 --------------------------------------GRVDEAKMLMAKMRLNGFKDNV 296
G+ ++A ++ +M GF +
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
ST+ ++ LC K D A + ++ PDV +Y ++I+ FCK+G +A E
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M G P V ++ A+ ++ ++ A L + M C+PN V+Y +I G C + G
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS-G 599
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMY 440
+++ + RM + D MY
Sbjct: 600 QIEKACQIYARMRGNADIPDVDMY 623
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 14/332 (4%)
Query: 144 FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
F+ +QI G Y++LL VL + ++ E+F +I E+ +IR
Sbjct: 148 FFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILG-KLLNVLIRK 206
Query: 204 YCKMGM----IENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
C+ G+ +E ++ D + KP+ L YN ++ F + L+ A EM + G
Sbjct: 207 CCRNGLWNVALEELGRLKD-LGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNM 265
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ T ++ LC GR EA L+ K FK + + M+ GLC F++A+ +L
Sbjct: 266 DGYTLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEASLFEEAMDFL 322
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ ++ P+V +Y +++ G + + +L M G P+ FN++ +
Sbjct: 323 SRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRS 382
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM-AKGRMQDVEDLVDR----MIRSGHN 434
G+ A LLK+M C P +V YN +I G+C K DV +L ++ M+ +
Sbjct: 383 GDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVV 442
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+ S L + C G E I EM++K
Sbjct: 443 LNKVNVSNLARCLCGAGKFEKAYSIIREMMSK 474
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 116/298 (38%), Gaps = 74/298 (24%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G + A F + + G +Y+Y+SL+ L + + LA + +++ EN
Sbjct: 677 LIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML-EN 735
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGF--------- 236
P+V YT MI G CK+G + A ++ +M K PN++ Y MI+GF
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795
Query: 237 --------------------------CKKGELEEAKKCMNEMMNR-------GCR----- 258
C G L++A + ++EM G R
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEG 855
Query: 259 ---------------------PNELTYNAMIYGLCINGRVDEAKMLMAKMR--LNGFKDN 295
P Y +I C GR++ A L +M + +
Sbjct: 856 FNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAAD 915
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ S+++ L + K D+A ++++ P++ + ++ G +I + +EA+ L
Sbjct: 916 KDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 220/451 (48%), Gaps = 58/451 (12%)
Query: 92 TPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFH 147
T Y+ + +L + S + A L +K+++ + D F + LI ++ G ++ A WF
Sbjct: 480 TSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ + + +Y +L+ ++ + A E F ++ E +P +V TYT +I G+CK
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP-NVVTYTALIDGHCKS 598
Query: 208 GMIENAKKVF-------DVMTVK------------PNLLAYNTMINGFCKKGELEEAKKC 248
G IE A +++ D+ V PN+ Y +++G CK +++EA+
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ M GC PN + Y+A+I G C G++DEA+M+ KM G+ NV T+ S++ L
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+ D A+ L ++E + P+V Y +I+G CK+GK+DEA L+ M +G P V +
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ A+ + G++D+ + L++QM C PNFV+Y +I C A G + D L+D M
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI-NHCCAAGLLDDAHQLLDEM 837
Query: 429 IRS--------------GHNLDFTM-------------------YSCLLKGYCEEGNVEN 455
++ G N +F + Y L+ +C+ G +E
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLEL 897
Query: 456 VMQIAHEMVTKKGRLLKLKNFLTRVVDALLL 486
+++ EM + K+ + ++++L L
Sbjct: 898 ALELHKEMSSCTSYSAADKDLYSSLIESLSL 928
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 197/502 (39%), Gaps = 94/502 (18%)
Query: 46 LDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSH 105
L QF L +V V+ NP + FF WA Y HT P Y A+ +VL
Sbjct: 120 LRQFREKLNETLVVDVLSLVKNPELGVKFFIWAG----RQIGYGHTGPVYHALLEVLGCG 175
Query: 106 SLISIAASLLKNSNKLSDFFISK----LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSY 161
+ L+ + K LI+ G A+ + K + +Y
Sbjct: 176 GNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTY 235
Query: 162 NSLLGVLVRVNSIKLAEE-------------------FFH------------QIVKENVV 190
N+L+ V + + + A F H ++++
Sbjct: 236 NALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF 295
Query: 191 PPDVSTYTTMIRGYCKMGMIENA-----------------------------------KK 215
D YT MI G C+ + E A K+
Sbjct: 296 KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355
Query: 216 VFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ +M + P+ +N++I+ +C+ G+ A K + +M + GC+P + YN +I G+C
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415
Query: 273 INGRVDE-----------AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
N ++ +ML A + LN K NVS ++ + LC GKF++A +R
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVVLN--KVNVS---NLARCLCGAGKFEKAYSIIRE 470
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+M PD +Y VI C K D A L +EM++ + P VF++ + + G
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
L +A +M + C PN V+Y +I A+ +M +L + M+ G + Y+
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKAR-KMSSANELFEMMLSEGCIPNVVTYT 589
Query: 442 CLLKGYCEEGNVENVMQIAHEM 463
L+ G+C+ G +E QI M
Sbjct: 590 ALIDGHCKSGQIEKACQIYARM 611
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 142/324 (43%), Gaps = 46/324 (14%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y ++ L + + A +F ++ + +P +V TY ++ G + + K++ +M
Sbjct: 302 YTQMISGLCEASLFEEAMDFLSRMRSSSCIP-NVVTYRILLCGCLRKRQLGRCKRILSMM 360
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN--- 274
+ P+ +N++I+ +C+ G+ A K + +M + GC+P + YN +I G+C N
Sbjct: 361 ITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420
Query: 275 --------------------------------------GRVDEAKMLMAKMRLNGFKDNV 296
G+ ++A ++ +M GF +
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
ST+ ++ LC K D A + ++ PDV +Y ++I+ FCK+G +A E
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M G P V ++ A+ ++ ++ A L + M C+PN V+Y +I G C + G
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS-G 599
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMY 440
+++ + RM + D MY
Sbjct: 600 QIEKACQIYARMRGNADIPDVDMY 623
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 14/332 (4%)
Query: 144 FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
F+ +QI G Y++LL VL + ++ E+F +I E+ +IR
Sbjct: 148 FFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILG-KLLNVLIRK 206
Query: 204 YCKMGM----IENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
C+ G+ +E ++ D + KP+ L YN ++ F + L+ A EM + G
Sbjct: 207 CCRNGLWNVALEELGRLKD-LGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNM 265
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ T ++ LC GR EA L+ K FK + + M+ GLC F++A+ +L
Sbjct: 266 DGYTLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEASLFEEAMDFL 322
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ ++ P+V +Y +++ G + + +L M G P+ FN++ +
Sbjct: 323 SRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRS 382
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM-AKGRMQDVEDLVDR----MIRSGHN 434
G+ A LLK+M C P +V YN +I G+C K DV +L ++ M+ +
Sbjct: 383 GDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVV 442
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+ S L + C G E I EM++K
Sbjct: 443 LNKVNVSNLARCLCGAGKFEKAYSIIREMMSK 474
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 116/298 (38%), Gaps = 74/298 (24%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G + A F + + G +Y+Y+SL+ L + + LA + +++ EN
Sbjct: 677 LIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML-EN 735
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGF--------- 236
P+V YT MI G CK+G + A ++ +M K PN++ Y MI+GF
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795
Query: 237 --------------------------CKKGELEEAKKCMNEMMNR-------GCR----- 258
C G L++A + ++EM G R
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEG 855
Query: 259 ---------------------PNELTYNAMIYGLCINGRVDEAKMLMAKMR--LNGFKDN 295
P Y +I C GR++ A L +M + +
Sbjct: 856 FNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAAD 915
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ S+++ L + K D+A ++++ P++ + ++ G +I + +EA+ L
Sbjct: 916 KDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 246/506 (48%), Gaps = 51/506 (10%)
Query: 24 ITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNP 83
++++I+ L+P K ISS+ + S +T V+ EQ + F W+
Sbjct: 38 VSTIIETLDPMEDGLKVISSR--------IRSYTITSVLQEQPDTRLGFRLFIWSLK--- 86
Query: 84 NPNKYHHTTPCYTAITDVLLSHSLISIAASL-------LKNSN-KLSDFFISKLIKAYGD 135
+H C T + D+++ + A L LKNS K+S S LI+AY +
Sbjct: 87 ---SWH--LRCRT-VQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSE 140
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
G + A+ F + + L+++N +L LVR + LA ++Q++K N+ PDV
Sbjct: 141 AGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNL-NPDVV 199
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY +I G CK ++A +FD MT + PN + Y+ +++G C+ ++ +A++ ++M
Sbjct: 200 TYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKM 259
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
GC + +TYN ++ G C +G +D+A L+ + +G V + ++ GL ++
Sbjct: 260 RASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRY 319
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
++A + + ++ N+ PDV Y ++I G + G+ EA++LL EM RGL+P +NA+
Sbjct: 320 EEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNAL 379
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ + G LD A L ++ + DC PN +Y+ +ICG+C G + + + M + G
Sbjct: 380 IKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMC-KNGLINKAQHIFKEMEKLG 438
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEM--VTKKGRLLKLKNFLTRVVDALLLMWIV 490
++ L+ G C+ +E + ++M V K L+L +V D
Sbjct: 439 CLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFD-------- 490
Query: 491 TGGSWISRFVFVHQVVVIMERTVEDG 516
+ + V+MER E G
Sbjct: 491 -----------IASLQVMMERLCESG 505
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 150/303 (49%), Gaps = 52/303 (17%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y L+ L R + A ++ ++++EN+ PDV YT MIRG + G + A + M
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENI-KPDVMLYTIMIRGLSQEGRVTEALTLLGEM 364
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKK------------------------CMNEMM 253
T ++P+ + YN +I GFC G L+EA+ C N ++
Sbjct: 365 TERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLI 424
Query: 254 NR-----------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKM----------RLNGF 292
N+ GC P+ +T+N++I GLC R++EA++L +M RL+
Sbjct: 425 NKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQG 484
Query: 293 KD---NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
D ++++ + M++ LC G +A L ++++ + PD+++Y ++INGFCK G +
Sbjct: 485 TDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNING 544
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A L KEM+ +G P ++ + L G + A+ + +QM + C+P +Y TI+
Sbjct: 545 AFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMT 604
Query: 410 GLC 412
C
Sbjct: 605 WSC 607
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 162/401 (40%), Gaps = 68/401 (16%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I+ G V A+ + + YN+L+ + + AE +I K +
Sbjct: 344 MIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHD 403
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P + TY+ +I G CK G+I A+ +F M P+++ +N++ING CK LEEA
Sbjct: 404 CFPNN-HTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462
Query: 246 K------------------------------------------------KCMNEMMNRGC 257
+ K + ++++ G
Sbjct: 463 RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGV 522
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ TYN +I G C G ++ A L +M+L G + T+ +++ GL G+ + A+
Sbjct: 523 LPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALE 582
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL-LKEMRA-RGLKPTVFSFNAVFRI 375
+++ P+ +Y+ ++ C+ A+S+ +K +R RG + + R+
Sbjct: 583 IFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWE------DEKVRV 636
Query: 376 LVE---NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ E N EL AI L +M + Y + GL AK +D E +
Sbjct: 637 VAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAK---RDCEAFAIFSVLKD 693
Query: 433 HNLDFTMYSC--LLKGYCEEGNVENVMQIAHEMVTKKGRLL 471
++ + SC L+ C N++ M + + + RL+
Sbjct: 694 FKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLM 734
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 170/311 (54%), Gaps = 6/311 (1%)
Query: 160 SYNSLLGVLVRV-NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
SYN++L ++R S+K+AE F ++V E+ V P+V TY +IRG+C G +E F
Sbjct: 169 SYNAILDAVIRTKQSVKIAEGIFKEMV-ESGVSPNVYTYNILIRGFCTAGNLEMGLXFFG 227
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M PN++ YNT+I+ +CK ++ EA K + M +G PN ++YN +I GLC G
Sbjct: 228 EMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREG 287
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++ E ++ +M + + T +++ G C VG F QA+ +++ ++P+V +Y
Sbjct: 288 QMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYT 347
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+IN CK G + A+ L +MR RGL P ++ + + G L +A ++K+M +
Sbjct: 348 TLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVEN 407
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P ++YN +I G C+ GRM+D L+ MI G D YS ++ G+C +E
Sbjct: 408 GFTPTIITYNALINGHCIL-GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEK 466
Query: 456 VMQIAHEMVTK 466
Q+ EMV K
Sbjct: 467 AFQLKVEMVAK 477
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 188/356 (52%), Gaps = 40/356 (11%)
Query: 150 KQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ +E+G +Y+YN L+ ++++ FF ++ + N P+V TY T+I YCK+
Sbjct: 193 EMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEM-ERNGCLPNVVTYNTIIDAYCKL 251
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
I A K+ +M +K PNL++YN +ING C++G+++E + + EM R P+ +T+
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I G C G +A +L A+M NG NV T+ +++ +C G ++A+ +L + +
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
++P+ ++Y +I+GF + G +A ++KEM G PT+ ++NA+ G ++
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLC---------------MAKG------------- 416
A LL++M + +P+ VSY+TII G C +AKG
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQ 491
Query: 417 ------RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R+ +V DL M+ G D Y+ L+ YC EG+++ +++ EM+ K
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 157/293 (53%), Gaps = 5/293 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L SYN ++ L R +K E ++ K VP D T+ T+I GYC +G A +
Sbjct: 273 LISYNVVINGLCREGQMKETSEILEEMSKRRYVP-DRVTFNTLINGYCNVGNFHQALVLH 331
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + PN++ Y T+IN CK G L A + +++M +RG PN TY +I G
Sbjct: 332 AEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQ 391
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + +A +M +M NGF + T+ +++ G C++G+ + A G L+ ++E PDV SY
Sbjct: 392 GFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSY 451
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+GFC+ + ++A L EM A+G+ P V +++++ + L + L L ++M
Sbjct: 452 STIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLS 511
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+ P+ V+Y ++I C+ +G + L D MI+ G + D Y+ L+ G+
Sbjct: 512 LGLPPDEVTYTSLINAYCI-EGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 185/356 (51%), Gaps = 24/356 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y + GN A+ A+ ++NG + +Y +L+ + + ++ A EF Q+ +
Sbjct: 314 LINGYCNVGNFHQALVL--HAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM-R 370
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + P+ TYTT+I G+ + G ++ A ++ M P ++ YN +ING C G +E
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + EM+ RG P+ ++Y+ +I G C N +++A L +M G +V+T+ S++
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+GLC + + + ++ + PD +Y +IN +C G D+A+ L EM +G
Sbjct: 491 QGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFS 550
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII--C------------ 409
P + ++N + + A LL ++ + +PN ++YNT+I C
Sbjct: 551 PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALM 610
Query: 410 -GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G CM KG M + + +++ M++ G+ L+ +Y+ ++ G+ + GN+E + EM+
Sbjct: 611 KGFCM-KGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 7/313 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST--YTTMIRGYCKMGMIENAKK 215
LY L V VN++ E Q +K + S+ + +++ ++ +I A
Sbjct: 94 LYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALS 153
Query: 216 VFDVMT---VKPNLLAYNTMINGFCK-KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+ ++ P +L+YN +++ + K ++ A+ EM+ G PN TYN +I G
Sbjct: 154 IVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGF 213
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G ++ +M NG NV T+ +++ C + K +A LR + +NP++
Sbjct: 214 CTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNL 273
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
SY VVING C+ G+ E +L+EM R P +FN + G +A++L +
Sbjct: 274 ISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + PN V+Y T+I +C A G + + +D+M G + + Y+ L+ G+ ++G
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKA-GNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQG 392
Query: 452 NVENVMQIAHEMV 464
++ QI EMV
Sbjct: 393 FLKQAYQIMKEMV 405
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 187/413 (45%), Gaps = 55/413 (13%)
Query: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL 164
H + + A ++KN + + LI + GN+ A+ + Q + +Y +L
Sbjct: 325 HQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTL 384
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK- 223
+ + +K A + ++V EN P + TY +I G+C +G +E+A + M +
Sbjct: 385 IDGFSQQGFLKQAYQIMKEMV-ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 224 --PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
P++++Y+T+I+GFC+ ELE+A + EM+ +G P+ TY+++I GLC R+ E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L +M G + T+ S++ C+ G D+A+ +++ +PD+ +Y V+INGF
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFN---------------AVFRILVENGELDRAI 386
K ++ EA LL ++ P ++N A+ + G ++ A
Sbjct: 564 NKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEAD 623
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG---HN--------- 434
+L+ M Q N YN II G G ++ +L M+ SG H+
Sbjct: 624 RVLESMLQKGYKLNEEVYNVIIHGHSKV-GNIEKAYNLYKEMLHSGFAPHSVTIMALAKS 682
Query: 435 -------------LDFTMYSC----------LLKGYCEEGNVENVMQIAHEMV 464
LD+T+ SC L+ +EGN++ V + +M
Sbjct: 683 LYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMA 735
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 146/292 (50%), Gaps = 22/292 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SY++++ R ++ A + ++V + + PDV+TY+++I+G CK + +F
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGI-SPDVATYSSLIQGLCKQRRLGEVCDLFQE 508
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+ + Y ++IN +C +G+L++A + +EM+ +G P+ +TYN +I G R
Sbjct: 509 MLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSR 568
Query: 277 VDEAKMLMAKM----------RLNGFKDNVSTHK-----SMLKGLCVVGKFDQAVGYLRN 321
EAK L+ K+ N DN + + +++KG C+ G ++A L +
Sbjct: 569 TKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLES 628
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG- 380
+++ + + Y V+I+G K+G ++A +L KEM G P + A+ + L G
Sbjct: 629 MLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
E++ LL + C + ++ G+ +G M V +++ M SG
Sbjct: 689 EVELNQLLDYTLK--SCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSG 738
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 16/189 (8%)
Query: 329 PDVKSYEVVINGFCKIGKSDE-AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P V SY +++ + +S + A + KEM G+ P V+++N + R G L+ +
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLX 224
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+M + CLPN V+YNTII C + ++ + L+ M G N + Y+ ++ G
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLR-KIGEAFKLLRLMALKGLNPNLISYNVVINGL 283
Query: 448 CEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVV 507
C EG ++ +I EM ++ V D + ++ G + F HQ +V
Sbjct: 284 CREGQMKETSEILEEMSKRR-----------YVPDRVTFNTLINGYCNVGNF---HQALV 329
Query: 508 IMERTVEDG 516
+ V++G
Sbjct: 330 LHAEMVKNG 338
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMIN--- 234
H + + PD+ TY +I G+ K + AK++ + + PN + YNT+I+
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCN 599
Query: 235 ------------GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
GFC KG + EA + + M+ +G + NE YN +I+G G +++A
Sbjct: 600 NLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYN 659
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M +GF + T ++ K L GK + L +++ + +V+I
Sbjct: 660 LYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINS 719
Query: 343 KIGKSDEAISLLKEMRARGLKP 364
K G D ++LK+M GL P
Sbjct: 720 KEGNMDAVFNVLKDMALSGLLP 741
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 177/312 (56%), Gaps = 8/312 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN L+ L + + A E H++V V P D T+ +++ G CK G E A +
Sbjct: 10 VFTYNILIDGLCKASKTDKASEMLHEMVDRGVTP-DTVTFNSIMDGLCKAGKFERAHSLL 68
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
VM +P+ YNT+I+G CK+ ++ AK ++E ++ G P+ +TY+ + GLC
Sbjct: 69 AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKR 128
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+DEA L+ +M NG N+ T+ +++ GLC K ++A L ++ + PDV +Y
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTY 188
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++G CK G+ D+A+ +++ M RG P+V ++ A+ L G +D A + K+M
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
DC + ++Y +++ G C + R ++ + +VD IR +D +Y+ L+ GYC+EG ++
Sbjct: 249 KDCTADALAYVSLVNGYCKSS-RTKEAQKVVDG-IRGTPYID--VYNALMDGYCKEGRLD 304
Query: 455 NVMQIAHEMVTK 466
+ + +M +
Sbjct: 305 EIPNVFEDMACR 316
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 149/285 (52%), Gaps = 12/285 (4%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
V P++ YN +I+G CK + ++A + ++EM++RG P+ +T+N+++ GLC G+ + A
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L+A M + + T+ +++ GLC D+A + + + PDV +Y ++ +G
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK G+ DEA L+KEM G P + ++N + L + + ++A LL+ + +P+
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
V+Y I+ GLC +GR+ +V+ M++ G Y+ L++G C G V+ I
Sbjct: 186 VTYTIIVDGLC-KEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 244
Query: 462 EMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVV 506
EMV+K DAL + +V G SR +VV
Sbjct: 245 EMVSKDC-----------TADALAYVSLVNGYCKSSRTKEAQKVV 278
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 157/307 (51%), Gaps = 3/307 (0%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ L R + A F ++V ++ D Y +++ GYCK + A+KV D
Sbjct: 222 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA-DALAYVSLVNGYCKSSRTKEAQKVVDG 280
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+ P + YN +++G+CK+G L+E +M RGC PN TYN ++ GLC +G+VDE
Sbjct: 281 IRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDE 340
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A + M G +V ++ ++ GL K +A L +++A + PD +Y ++
Sbjct: 341 AFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA 400
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
FCK + D+A+ +LK M G+ P ++N + L + L A L+ +M + C+
Sbjct: 401 QFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVV 460
Query: 400 NF-VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
+ +YNTII LC +G ++ L+D M G + Y+ + C+EG ++
Sbjct: 461 SACTTYNTIIDRLC-KEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASS 519
Query: 459 IAHEMVT 465
+ EM T
Sbjct: 520 LLSEMDT 526
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 158/320 (49%), Gaps = 10/320 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN ++ L + + K A + Q+++ + PPD TY T++ +CK ++A +
Sbjct: 359 SYNIIIDGLFKASKPKEARQVLDQMIQAGI-PPDAVTYNTLMAQFCKEERFDDAVGILKN 417
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT-YNAMIYGLCING 275
M V P+ + YNT+I+G + L +A + M+EM+ GC + T YN +I LC G
Sbjct: 418 MIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG 477
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ +A +LM M +G + N T+ + LC G+ D+A L E + D SY
Sbjct: 478 CLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS---EMDTLRDEVSYT 534
Query: 336 VVINGFCKIGKSDEAISLLKEMRA-RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
VI G CK + D A L +EM A +GL T +FN + + LD A+ LL+ M Q
Sbjct: 535 TVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQ 594
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ ++YN +I LC ++ +L D M G Y+ L+ G C +G +
Sbjct: 595 RGCSPSVITYNMVITCLCKLD-KVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGK 653
Query: 455 NVMQIAHEMVTKKGRLLKLK 474
+Q+ EM + + LK
Sbjct: 654 EALQVLEEMASSDCEIDDLK 673
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 117/217 (53%), Gaps = 2/217 (0%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M R P+ TYN +I GLC + D+A ++ +M G + T S++ GLC GK
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
F++A L + E N P +Y +I+G CK D A +L+ E + G P V +++
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L + G +D A L+K+M C PN V+YNT+I GLC A + + +L++ ++ S
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKAS-KTEKAYELLETLVSS 179
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
G D Y+ ++ G C+EG ++ +++ M+ K+G
Sbjct: 180 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGML-KRG 215
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 4/172 (2%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL----AYNTMINGFCKKGELEEAKKC 248
D +YTT+I G CK ++ A K+ M L +N +I+ F K L+EA
Sbjct: 529 DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 588
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M+ RGC P+ +TYN +I LC +VD+A L +M + G + ++ ++ GLC
Sbjct: 589 LELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCG 648
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
G+ +A+ L + ++ D + G+ +EA LL+ M +
Sbjct: 649 QGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 178/313 (56%), Gaps = 9/313 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
++ ++ + N +K A F ++ V P+ TY ++ G CK + A K+
Sbjct: 9 TWTIIIDGFCKANQLKQALACFEKM--REFVAPNERTYNVVVNGLCKARLTSKAYEVLKE 66
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR-GCRPNELTYNAMIYGLCIN 274
+ D +V P+L+ Y+T+INGFCK+GE++ A + + EM+ R G P+ +TY +++ GLC +
Sbjct: 67 MRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRD 126
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM-EANMNPDVKS 333
G++D A ++ +M+L G + + T +++ G C K D+A+ + ++ ++ PDV +
Sbjct: 127 GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVT 186
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I+GFCK G ++A+ +L M R P V +++++ L + G+LD+A+ L ++M
Sbjct: 187 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 246
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
C+PN V+Y T+I GLC A ++ L+D M + D Y+ LL GYC G +
Sbjct: 247 SKGCVPNVVTYTTLIHGLCAAH-KVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRI 305
Query: 454 ENVMQIAHEMVTK 466
E Q+ EM TK
Sbjct: 306 EEAKQLFKEMATK 318
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 165/313 (52%), Gaps = 7/313 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-D 218
+Y S++ L R + A E ++ K V PD T++ +I G+C ++ A K++ +
Sbjct: 115 TYTSVVDGLCRDGKMDRACEMVREM-KLKGVEPDKFTFSALITGWCNARKVDEALKLYKE 173
Query: 219 VMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
++T KP+++ Y +I+GFCK G LE+A K + M R C PN +TY+++++GLC G
Sbjct: 174 ILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 233
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+D+A L +M G NV T+ +++ GLC K D A + + PD SY
Sbjct: 234 DLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYN 293
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++G+C++G+ +EA L KEM + P ++ + R L+ A LL+ M
Sbjct: 294 ALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA 353
Query: 396 DCL-PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ P+ V+Y+ ++ G AK R + + + MI + YS L+ G C+ G V+
Sbjct: 354 AGIDPDVVTYSIVVAGYSRAK-RFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVD 412
Query: 455 NVMQIAHEMVTKK 467
+ M++ MV K+
Sbjct: 413 HAMEVLKNMVNKR 425
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 168/315 (53%), Gaps = 8/315 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L + A E ++ V PD+ TY+T+I G+CK G ++ A ++
Sbjct: 43 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 102
Query: 220 MTVK----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + P+++ Y ++++G C+ G+++ A + + EM +G P++ T++A+I G C
Sbjct: 103 MVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 162
Query: 276 RVDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN-PDVKS 333
+VDEA K+ + + +K +V T+ +++ G C G ++A+ L VME P+V +
Sbjct: 163 KVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKML-GVMEGRKCVPNVVT 221
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +++G CK G D+A+ L + M ++G P V ++ + L ++D A LL+ +M
Sbjct: 222 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 281
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
C P+ VSYN ++ G C GR+++ + L M D Y+CL++G+C +
Sbjct: 282 ATCCPPDTVSYNALLDGYCRL-GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRL 340
Query: 454 ENVMQIAHEMVTKKG 468
E + M T G
Sbjct: 341 EEARFLLENMKTAAG 355
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 175/344 (50%), Gaps = 44/344 (12%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+++++L+ + A + + +I+ + PDV TYT +I G+CK G +E A K+
Sbjct: 149 FTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLG 208
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
VM + PN++ Y+++++G CK G+L++A M ++GC PN +TY +I+GLC
Sbjct: 209 VMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAH 268
Query: 276 RVDEAKMLMAKMR--------------LNG-------------FKDNVS--------THK 300
+VD A++LM +M L+G FK+ + T+
Sbjct: 269 KVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYT 328
Query: 301 SMLKGLCVVGKFDQAVGYLRNV-MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++G C + ++A L N+ A ++PDV +Y +V+ G+ + + EA ++EM A
Sbjct: 329 CLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA 388
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
R + P +++++ L + G +D A+ +LK M P+ ++N++I LC G M
Sbjct: 389 RNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRL-GDMD 447
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ L+ M G Y+ LL+G+ G M+IA+E+
Sbjct: 448 EAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR----MEIAYEL 487
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 151/284 (53%), Gaps = 13/284 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN+LL R+ I+ A++ F ++ ++ +P D TYT ++RG+C +E A+ + +
Sbjct: 291 SYNALLDGYCRLGRIEEAKQLFKEMATKSCLP-DRITYTCLVRGFCNASRLEEARFLLEN 349
Query: 220 MT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + P+++ Y+ ++ G+ + EA + + EM+ R PN +TY+++I GLC G
Sbjct: 350 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 409
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
RVD A ++ M + +V T S++ LC +G D+A L + + P + +Y
Sbjct: 410 RVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 469
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVF-------SFNAVFRILVENGELDRAILL 388
++ GF + G+ + A L + MR + K + +F+A+ R L + E+D+A+ +
Sbjct: 470 TLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAV 529
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
++++ +C P I+ GL A GR ++ L++ + + G
Sbjct: 530 VEELRSRECEPAEEDCLAIVDGLLRA-GRTEEAGKLINSISKVG 572
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 36/249 (14%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M +P ++ + +I+GFCK +L++A C E M PNE TYN ++ GLC +
Sbjct: 1 MECQPTVVTWTIIIDGFCKANQLKQALACF-EKMREFVAPNERTYNVVVNGLCKARLTSK 59
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A ++ +MR GK ++ PD+ +Y VIN
Sbjct: 60 AYEVLKEMR--------------------DGK--------------SVAPDLVTYSTVIN 85
Query: 340 GFCKIGKSDEAISLLKEMRAR-GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
GFCK G+ D A +L+EM R G+ P V ++ +V L +G++DRA ++++M
Sbjct: 86 GFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVE 145
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P+ +++ +I G C A+ + ++ + + S D Y+ L+ G+C+ GN+E M+
Sbjct: 146 PDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMK 205
Query: 459 IAHEMVTKK 467
+ M +K
Sbjct: 206 MLGVMEGRK 214
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 106/213 (49%), Gaps = 11/213 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+ ++ R A EF +++ NV P V TY+++I G CK G +++A +V
Sbjct: 362 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAV-TYSSLIDGLCKAGRVDHAMEVLKN 420
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V+P++ +N++I C+ G+++EA K + M G P +TY ++ G GR
Sbjct: 421 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 480
Query: 277 VDEAKMLMAKMRLNGFKDNVSTH-------KSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
++ A L MR K + + + ++++GLC + D+A+ + + P
Sbjct: 481 MEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEP 540
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ +++G + G+++EA L+ + GL
Sbjct: 541 AEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 196/363 (53%), Gaps = 9/363 (2%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
S+ A++LK + ++ LIK RG +K A+++ Q + G L SY +L+
Sbjct: 113 SVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQL--VAQGFQLDQVSYGTLIN 170
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
L + K ++ + + V PDV Y T+I CK ++ +A V+ M VK
Sbjct: 171 GLCKTGETKAVARLLRKL-EGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGIS 229
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ Y T+I+GFC G L+EA +NEM + PN T+N +I L G++ EAK+L
Sbjct: 230 PDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKIL 289
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+A M K +V T+ S++ G +V + A ++ + + PDV+ Y +ING CK
Sbjct: 290 LAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCK 349
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
DEA+SL +EM+ + + P + ++N++ L +N L+RAI L K+M + P+ S
Sbjct: 350 TKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYS 409
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y ++ GLC + GR++D +++ R++ G++L+ Y+ L+ C+ G + + + +M
Sbjct: 410 YTILLDGLCKS-GRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKM 468
Query: 464 VTK 466
K
Sbjct: 469 EDK 471
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 126/237 (53%), Gaps = 4/237 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A G +K A + +++YNSL+ V+ +K A+ F+ + +
Sbjct: 273 LIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRG 332
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
V P DV YT MI G CK M++ A +F+ M K P+++ YN++I+G CK LE A
Sbjct: 333 VTP-DVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERA 391
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
M +G +P+ +Y ++ GLC +GR+++AK + ++ G+ NV + ++
Sbjct: 392 IALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINR 451
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
LC G FD+A+ + + PD +++++I + ++D+A +L+EM ARGL
Sbjct: 452 LCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 153/311 (49%), Gaps = 5/311 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+ +N++L LV F Q + N + PD+ T + +I +C I A VF
Sbjct: 58 FHFNNILSSLVNNKHYPTVISLFKQF-EPNGITPDLCTLSILINCFCHQAHITLAFSVFA 116
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ + PN + NT+I G C +GE+++A ++++ +G + ++++Y +I GLC G
Sbjct: 117 NILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTG 176
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
L+ K+ + K +V + +++ LC A ++ ++PDV +Y
Sbjct: 177 ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYT 236
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+GFC +G EA SLL EM+ + + P V +FN + L + G++ A +LL M +
Sbjct: 237 TLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKA 296
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ +YN++I G + ++ + + M + G D Y+ ++ G C+ V+
Sbjct: 297 CIKPDVFTYNSLIDGYFLVD-EVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDE 355
Query: 456 VMQIAHEMVTK 466
M + EM K
Sbjct: 356 AMSLFEEMKHK 366
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 1/236 (0%)
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+M P +N +++ + G P+ T + +I C +
Sbjct: 50 LMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHIT 109
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
A + A + GF N T +++KGLC G+ +A+ + ++ D SY +I
Sbjct: 110 LAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLI 169
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG CK G++ LL+++ +KP V +N + L +N L A + +M
Sbjct: 170 NGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGIS 229
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ V+Y T+I G C+ G +++ L++ M N + ++ L+ +EG ++
Sbjct: 230 PDVVTYTTLIHGFCIM-GHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMK 284
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 174/309 (56%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ ++ ++ A ++F +++ + + PD TYTT+I+G+ + G + + +F M
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKI-SPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+KP+ + Y T+I+ +CK GE+ A NEM+ G PN +TY A+I GLC +G +
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A L+ +MR G + NV + SM+ G+C G +QA+ ++ + A ++PD +Y V
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ +C++G D+A LL+EM RGL+PTV +FN + G L+ LL M +
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ ++YNT++ C+ + M + RM G D Y+ L+KG+C+ N++
Sbjct: 605 VPDAITYNTLMKQHCI-RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663
Query: 458 QIAHEMVTK 466
+ EM+ K
Sbjct: 664 FLYKEMIEK 672
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 234/499 (46%), Gaps = 47/499 (9%)
Query: 5 RRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNIS-------------SQPLDQFSL 51
RR LT ++P +L T +P+ P+ ++ S+PL +
Sbjct: 38 RRWLTQSQRVPSSFLLQTR---PFPDYSPKKPTIRDTELIHDITAVIKLRRSEPLHRILK 94
Query: 52 CLGSNI----VTKVIYEQTNPYH-ALFFFNWASNPNPNPNKYHHTTPCYTAIT--DVLLS 104
SN + V+ N Y+ L FF+WA P+ + A+ D+ L+
Sbjct: 95 AHESNFRYDHLIWVLMNIKNDYNLVLAFFDWA-RVRREPSLEARCIIIHIAVVSNDLRLA 153
Query: 105 HSLIS--IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQ----------AKQI 152
H L+ S L+ K++ F +LI Y G A F Q A+++
Sbjct: 154 HELVHDYFLNSKLEIGVKMTQF-THRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKL 212
Query: 153 ENGACLY----SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
+ Y + +S L R+ + E ++ E + + ++Y +I C++G
Sbjct: 213 LDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLG 272
Query: 209 MIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
++ A ++ D + P++++Y+T+I+G+C GEL++A K M++M +G +PN TYN
Sbjct: 273 KVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYN 332
Query: 266 AMIYGLCINGRVDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
++I LC G+ EA K+L M DNV + +++ G +G A + ++
Sbjct: 333 SIILLLCKIGKSFEAEKVLREMMSQKIIPDNV-VYTTLIHGFFKLGHVRTANKWFDEMLS 391
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
++PD +Y +I GF + GK E +L EM +RGLKP ++ + + + GE+
Sbjct: 392 KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN 451
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A L +M QM PN V+Y +I GLC G + +L+D M + G L+ +Y+ ++
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLC-KHGELDTANELLDEMRKKGLQLNVCIYNSMV 510
Query: 445 KGYCEEGNVENVMQIAHEM 463
G C+ GN+E +++ EM
Sbjct: 511 NGICKAGNIEQAIKLMKEM 529
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 164/345 (47%), Gaps = 40/345 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN ++ L R+ +K A Q+ + P DV +Y+T+I GYC +G ++ A K+ D
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTP-DVVSYSTVIDGYCHLGELKKALKLMDD 318
Query: 220 MTVK--------------------------------------PNLLAYNTMINGFCKKGE 241
M +K P+ + Y T+I+GF K G
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ A K +EM+++ P+ +TY +I G G+V E + L +M G K + T+ +
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ C G+ A +++ M P++ +Y +I+G CK G+ D A LL EMR +G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+ V +N++ + + G +++AI L+K+M P+ ++Y T+I C G +
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL-GDIDKA 557
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+ M+ G ++ L+ G+C G +E+ ++ M+ K
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEK 602
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 151/306 (49%), Gaps = 5/306 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y G + A ++ Q+ + +Y +L+ L + + A E ++ K
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELE 243
+ + +V Y +M+ G CK G IE A K+ +V + P+ + Y T+I+ +C+ G+++
Sbjct: 497 KGL-QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDID 555
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A K + EM++RG +P +T+N ++ G C+ G +++ L+ M G + T+ +++
Sbjct: 556 KAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
K C+ + + + + PD +Y ++I G CK EA L KEM +G
Sbjct: 616 KQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYV 675
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
PTV S+NA+ + + + A L ++M + + YN + +C +G ++ +
Sbjct: 676 PTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFV-DMCYEEGDVEITLN 734
Query: 424 LVDRMI 429
L D I
Sbjct: 735 LCDEAI 740
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 38/244 (15%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN +A++ + G L EA+K ++++++ YGL + VD
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLS--------------YGLVVT--VDSCNAF 231
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
++++ +N + +K C E ++ + SY ++I C+
Sbjct: 232 LSRI-----ANNSEGIEMAIKVFC----------------EYGISWNTTSYNIIIYSLCR 270
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+GK EA LL +M R P V S++ V GEL +A+ L+ M PN +
Sbjct: 271 LGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYT 330
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YN+II LC G+ + E ++ M+ D +Y+ L+ G+ + G+V + EM
Sbjct: 331 YNSIILLLCKI-GKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM 389
Query: 464 VTKK 467
++KK
Sbjct: 390 LSKK 393
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 174/309 (56%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ ++ ++ A ++F +++ + + PD TYTT+I+G+ + G + + +F M
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKI-SPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+KP+ + Y T+I+ +CK GE+ A NEM+ G PN +TY A+I GLC +G +
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A L+ +MR G + NV + SM+ G+C G +QA+ ++ + A ++PD +Y V
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ +C++G D+A LL+EM RGL+PTV +FN + G L+ LL M +
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ ++YNT++ C+ + M + RM G D Y+ L+KG+C+ N++
Sbjct: 605 VPDAITYNTLMKQHCI-RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663
Query: 458 QIAHEMVTK 466
+ EM+ K
Sbjct: 664 FLYKEMIEK 672
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 234/500 (46%), Gaps = 49/500 (9%)
Query: 5 RRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNIS-------------SQPLDQFSL 51
RR LT ++P +L T +P+ P+ ++ S+PL +
Sbjct: 38 RRWLTQSQRVPSSFLLQTR---PFPDYSPKKPTIRDTELIHDITAVIKLRRSEPLHRILK 94
Query: 52 CLGSNI----VTKVIYEQTNPYH-ALFFFNWASNPNPNPNKYHHTTPCYTAIT--DVLLS 104
SN + V+ N Y+ L FF+WA P+ + A+ D+ L+
Sbjct: 95 AHESNFRYDHLIWVLMNIKNDYNLVLAFFDWA-RVRREPSLEARCIIIHIAVVSNDLRLA 153
Query: 105 HSLIS--IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC----- 157
H L+ S L+ K++ F +LI Y G A F Q +E G
Sbjct: 154 HELVHDYFLNSKLEIGVKMTQF-THRLIYTYKYWGPNPIAFDIFFQV-LVEIGHLSEARK 211
Query: 158 ----LYSYNSLLGV------LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
L SY ++ V L R+ + E ++ E + + ++Y +I C++
Sbjct: 212 LLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRL 271
Query: 208 GMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G ++ A ++ D + P++++Y+T+I+G+C GEL++A K M++M +G +PN TY
Sbjct: 272 GKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTY 331
Query: 265 NAMIYGLCINGRVDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
N++I LC G+ EA K+L M DNV + +++ G +G A + ++
Sbjct: 332 NSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV-VYTTLIHGFFKLGHVRTANKWFDEML 390
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
++PD +Y +I GF + GK E +L EM +RGLKP ++ + + + GE+
Sbjct: 391 SKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMV 450
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A L +M QM PN V+Y +I GLC G + +L+D M + G L+ +Y+ +
Sbjct: 451 NAFSLHNEMVQMGMTPNIVTYGALIDGLC-KHGELDTANELLDEMRKKGLQLNVCIYNSM 509
Query: 444 LKGYCEEGNVENVMQIAHEM 463
+ G C+ GN+E +++ EM
Sbjct: 510 VNGICKAGNIEQAIKLMKEM 529
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 164/345 (47%), Gaps = 40/345 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN ++ L R+ +K A Q+ + P DV +Y+T+I GYC +G ++ A K+ D
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTP-DVVSYSTVIDGYCHLGELKKALKLMDD 318
Query: 220 MTVK--------------------------------------PNLLAYNTMINGFCKKGE 241
M +K P+ + Y T+I+GF K G
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ A K +EM+++ P+ +TY +I G G+V E + L +M G K + T+ +
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ C G+ A +++ M P++ +Y +I+G CK G+ D A LL EMR +G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+ V +N++ + + G +++AI L+K+M P+ ++Y T+I C G +
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL-GDIDKA 557
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+ M+ G ++ L+ G+C G +E+ ++ M+ K
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEK 602
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 152/306 (49%), Gaps = 5/306 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y G + A ++ Q+ + +Y +L+ L + + A E ++ K
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELE 243
+ + +V Y +M+ G CK G IE A K+ +V + P+ + Y T+I+ +C+ G+++
Sbjct: 497 KGL-QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDID 555
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A K + EM++RG +P +T+N ++ G C+ G +++ L+ M G + T+ +++
Sbjct: 556 KAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
K C+ + + + + PD +Y ++I G CK EA L KEM +G
Sbjct: 616 KQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYV 675
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
PTV S+NA+ + + ++ A L ++M + + YN + +C +G ++ +
Sbjct: 676 PTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFV-DMCYEEGDVEITLN 734
Query: 424 LVDRMI 429
L D I
Sbjct: 735 LCDEAI 740
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 38/244 (15%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN +A++ + G L EA+K ++++++ YGL + VD
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLS--------------YGLVVT--VDSCNAF 231
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
++++ +N + +K C E ++ + SY ++I C+
Sbjct: 232 LSRI-----ANNSEGIEMAIKVFC----------------EYGISWNTTSYNIIIYSLCR 270
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+GK EA LL +M R P V S++ V GEL +A+ L+ M PN +
Sbjct: 271 LGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYT 330
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YN+II LC G+ + E ++ M+ D +Y+ L+ G+ + G+V + EM
Sbjct: 331 YNSIILLLCKI-GKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM 389
Query: 464 VTKK 467
++KK
Sbjct: 390 LSKK 393
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 246/507 (48%), Gaps = 51/507 (10%)
Query: 23 SITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPN 82
++++I+ L+P K ISS+ + S +T V+ EQ + F W+
Sbjct: 37 EVSTIIETLDPMEDGLKVISSR--------IRSYTITSVLQEQPDTRLGFRLFIWSLK-- 86
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASL-------LKNSN-KLSDFFISKLIKAYG 134
+H C T + D+++ + A L LKNS K+S S LI+AY
Sbjct: 87 ----SWH--LRCRT-VQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYS 139
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
+ G + A+ F + + L+++N +L LVR + LA ++Q++K N+ PDV
Sbjct: 140 EAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNL-NPDV 198
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
TY +I G CK ++A +FD MT + PN + Y+ +++G C+ ++ +A++ ++
Sbjct: 199 VTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSK 258
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M GC + +TYN ++ G C +G +D+A L+ + +G V + ++ GL +
Sbjct: 259 MRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARR 318
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
+++A + + ++ N+ PDV Y ++I G + G+ EA++LL EM RGL+P +NA
Sbjct: 319 YEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNA 378
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ + + G LD A L ++ + DC PN +Y+ +ICG+C G + + + M +
Sbjct: 379 LIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMC-KNGLINKAQHIFKEMEKL 437
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM--VTKKGRLLKLKNFLTRVVDALLLMWI 489
G ++ L+ G C+ +E + ++M V K L+L +V D
Sbjct: 438 GCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFD------- 490
Query: 490 VTGGSWISRFVFVHQVVVIMERTVEDG 516
+ + V+MER E G
Sbjct: 491 ------------IASLQVMMERLCESG 505
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 150/304 (49%), Gaps = 52/304 (17%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
Y L+ L R + A ++ ++++EN+ PDV YT MIRG + G + A +
Sbjct: 305 GYGCLINGLFRARRYEEAHMWYQKMLRENI-KPDVMLYTIMIRGLSQEGRVTEALTLLGE 363
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKK------------------------CMNEM 252
MT ++P+ + YN +I GFC G L+EA+ C N +
Sbjct: 364 MTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGL 423
Query: 253 MNR-----------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKM----------RLNG 291
+N+ GC P+ +T+N++I GLC R++EA++L +M RL+
Sbjct: 424 INKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQ 483
Query: 292 FKD---NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
D ++++ + M++ LC G +A L ++++ + PD+++Y ++INGFCK G +
Sbjct: 484 GTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNIN 543
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
A L KEM+ +G P ++ + L G + A+ + +QM + C+P +Y TI+
Sbjct: 544 GAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIM 603
Query: 409 CGLC 412
C
Sbjct: 604 TWSC 607
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 153/369 (41%), Gaps = 68/369 (18%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ + + AE +I K + P + TY+ +I G CK G+I A+ +F M
Sbjct: 376 YNALIKGFCDMGYLDEAESLRLEISKHDCFPNN-HTYSILICGMCKNGLINKAQHIFKEM 434
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAK------------------------------- 246
P+++ +N++ING CK LEEA+
Sbjct: 435 EKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASL 494
Query: 247 -----------------KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
K + ++++ G P+ TYN +I G C G ++ A L +M+L
Sbjct: 495 QVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQL 554
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G + T+ +++ GL G+ + A+ +++ P+ +Y+ ++ C+
Sbjct: 555 KGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISL 614
Query: 350 AISL-LKEMRA-RGLKPTVFSFNAVFRILVE---NGELDRAILLLKQMPQMDCLPNFVSY 404
A+S+ +K +R RG + + R++ E N EL AI L +M + Y
Sbjct: 615 ALSVWMKYLRDFRGWE------DEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPY 668
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC--LLKGYCEEGNVENVMQIAHE 462
+ GL AK +D E + ++ + SC L+ C N++ M +
Sbjct: 669 TIFLIGLVQAK---RDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLF 725
Query: 463 MVTKKGRLL 471
+ + RL+
Sbjct: 726 TLERGFRLM 734
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 174/345 (50%), Gaps = 40/345 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
+Y SL+ L NS A E F + + PP TY +I CK GM+E A KK
Sbjct: 47 AYTSLIHGLCMANSFDDARELFADMNRRGC-PPSPVTYNVIIDASCKRGMLEEACDLIKK 105
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ + V P+++ YNT+++G CK G +EEA NEM GC PN ++N +I GLC
Sbjct: 106 MIEDGHV-PDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQS 164
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++D+A + +M + ++ ++ GL GK ++A R ++++ + P +Y
Sbjct: 165 KIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYN 224
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
VVI+G C DEA+ L K MR++G +P+ F+FN + + G++D A LLK+M
Sbjct: 225 VVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDD 284
Query: 396 DCLPNFVSYNTIICGLC--------------MAK--------------------GRMQDV 421
+P+ V+Y+T+I GLC M K GR+++
Sbjct: 285 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+++D M+ SG + D Y+ L+ G+C G E ++ +MV +
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 164/312 (52%), Gaps = 5/312 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+SY L+ L + + A + F +++ V P V+ YT++I G C ++A+++F
Sbjct: 11 WSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVA-YTSLIHGLCMANSFDDARELFA 69
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + P+ + YN +I+ CK+G LEEA + +M+ G P+ +TYN ++ GLC +G
Sbjct: 70 DMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSG 129
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
RV+EA +L +M G N +H +++ GLC K DQA + ++ PD SY
Sbjct: 130 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYG 189
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++I+G K GK +EA L + M G+ P+ ++N V + LD A+ L K M
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C P+ ++N +I C +G+M + L+ RM GH D YS L+ G C V++
Sbjct: 250 GCRPSRFTFNILIDAHC-KRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 308
Query: 456 VMQIAHEMVTKK 467
+ +MV ++
Sbjct: 309 ARHLLEDMVKRQ 320
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 174/331 (52%), Gaps = 5/331 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G V+ A+ F++ +++ S+N+++ L + + I A + FH++ ++ PPD +
Sbjct: 129 GRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDI-PPDSWS 187
Query: 197 YTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y +I G K G + A K+F M + P+ + YN +I+G C L+EA + M
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
++GCRP+ T+N +I C G++DEA L+ +M +G +V T+ +++ GLC + + D
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A L ++++ P V + +I+G CK G+ EA +L M + G P V ++N +
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
G+ +RA LL M PN V+Y ++ GLC A R+ + + +M SG
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN-RLPEACGVFAQMKSSGC 426
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ Y+ L+ G+C G V+ +++ EMV
Sbjct: 427 APNLFTYTALILGFCSAGQVDGGLKLFGEMV 457
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 162/320 (50%), Gaps = 5/320 (1%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
FH+ + + +SY L+ L + + A + F +++ + P V TY +I G C
Sbjct: 173 FHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAV-TYNVVIHGMC 231
Query: 206 KMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
++ A ++F M K P+ +N +I+ CK+G+++EA + + M + G P+ +
Sbjct: 232 LAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVV 291
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
TY+ +I GLC RVD+A+ L+ M K V T +++ GLC G+ +A L +
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 351
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ + +PDV +Y +++G C+ G+++ A LL +M ARGL P V ++ A+ L + L
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
A + QM C PN +Y +I G C A G++ L M+ +G + D +Y
Sbjct: 412 PEACGVFAQMKSSGCAPNLFTYTALILGFCSA-GQVDGGLKLFGEMVCAGISPDHVVYGT 470
Query: 443 LLKGYCEEGNVENVMQIAHE 462
L C+ G ++I E
Sbjct: 471 LAAELCKSGRSARALEILRE 490
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 184/375 (49%), Gaps = 25/375 (6%)
Query: 67 NPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSL---ISIAASLLKNSNKLSD 123
N + LF S P+ Y+ I + L+++L + + S+ + S
Sbjct: 202 NEAYKLFRRMLDSGITPSAVTYN------VVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI A+ RG + A + + + +Y++L+ L + + A
Sbjct: 256 FTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+VK P V T T+I G CK G I+ A++V D M P+++ YNT+++G C+ G
Sbjct: 316 MVKRQC-KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ E A++ +++M+ RG PN +TY A++ GLC R+ EA + A+M+ +G N+ T+
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G C G+ D + ++ A ++PD Y + CK G+S A+ +L+E R
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGR-E 493
Query: 361 GLKPTVFSFNAVFRI----LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM--- 413
L+ + + V+R L++ G+++ A+ ++ M + LP +++ GLC
Sbjct: 494 SLRSEAWG-DEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQ 552
Query: 414 ---AKGRMQDVEDLV 425
A+ ++++ DL
Sbjct: 553 GGEARAVLEEIMDLA 567
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 170/311 (54%), Gaps = 6/311 (1%)
Query: 160 SYNSLLGVLVRV-NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
SYN++L ++R S+K+AE F ++V E+ V P+V TY +IRG+C G +E F
Sbjct: 169 SYNAILDAVIRTKQSVKIAEGIFKEMV-ESGVSPNVYTYNILIRGFCTAGNLEMGLFFFG 227
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M PN++ YNT+I+ +CK ++ EA K + M +G PN ++YN +I GLC G
Sbjct: 228 EMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREG 287
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++ E ++ +M + + T +++ G C VG F QA+ +++ ++P+V +Y
Sbjct: 288 QMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYT 347
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+IN CK G + A+ L +MR RGL P ++ + + G L +A ++K+M +
Sbjct: 348 TLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVEN 407
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P ++YN +I G C+ GRM+D L+ MI G D YS ++ G+C +E
Sbjct: 408 GFTPTIITYNALINGHCIL-GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEK 466
Query: 456 VMQIAHEMVTK 466
Q+ EMV K
Sbjct: 467 AFQLKVEMVAK 477
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 157/293 (53%), Gaps = 5/293 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L SYN ++ L R +K E ++ K VP D T+ T+I GYC +G A +
Sbjct: 273 LISYNVVINGLCREGQMKETSEILEEMSKRRYVP-DRVTFNTLINGYCNVGNFHQALVLH 331
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + PN++ Y T+IN CK G L A + +++M +RG PN TY +I G
Sbjct: 332 AEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQ 391
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + +A +M +M NGF + T+ +++ G C++G+ + A G L+ ++E PDV SY
Sbjct: 392 GFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSY 451
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+GFC+ + ++A L EM A+G+ P V +++++ + L + L L ++M
Sbjct: 452 STIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLS 511
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+ P+ V+Y ++I C+ +G + L D MI+ G + D Y+ L+ G+
Sbjct: 512 LGLPPDEVTYTSLINAYCI-EGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 185/356 (51%), Gaps = 24/356 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y + GN A+ A+ ++NG + +Y +L+ + + ++ A EF Q+ +
Sbjct: 314 LINGYCNVGNFHQALVL--HAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM-R 370
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + P+ TYTT+I G+ + G ++ A ++ M P ++ YN +ING C G +E
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + EM+ RG P+ ++Y+ +I G C N +++A L +M G +V+T+ S++
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+GLC + + + ++ + PD +Y +IN +C G D+A+ L EM +G
Sbjct: 491 QGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFS 550
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII--C------------ 409
P + ++N + + A LL ++ + +PN ++YNT+I C
Sbjct: 551 PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALM 610
Query: 410 -GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G CM KG M + + +++ M++ G+ L+ +Y+ ++ G+ + GN+E + EM+
Sbjct: 611 KGFCM-KGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 7/313 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST--YTTMIRGYCKMGMIENAKK 215
LY L V VN++ E Q +K + S+ + +++ ++ +I A
Sbjct: 94 LYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALS 153
Query: 216 VFDVMT---VKPNLLAYNTMINGFCK-KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+ ++ P +L+YN +++ + K ++ A+ EM+ G PN TYN +I G
Sbjct: 154 IVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGF 213
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G ++ +M NG NV T+ +++ C + K +A LR + +NP++
Sbjct: 214 CTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNL 273
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
SY VVING C+ G+ E +L+EM R P +FN + G +A++L +
Sbjct: 274 ISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + PN V+Y T+I +C A G + + +D+M G + + Y+ L+ G+ ++G
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKA-GNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQG 392
Query: 452 NVENVMQIAHEMV 464
++ QI EMV
Sbjct: 393 FLKQAYQIMKEMV 405
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 187/413 (45%), Gaps = 55/413 (13%)
Query: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL 164
H + + A ++KN + + LI + GN+ A+ + Q + +Y +L
Sbjct: 325 HQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTL 384
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK- 223
+ + +K A + ++V EN P + TY +I G+C +G +E+A + M +
Sbjct: 385 IDGFSQQGFLKQAYQIMKEMV-ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 224 --PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
P++++Y+T+I+GFC+ ELE+A + EM+ +G P+ TY+++I GLC R+ E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L +M G + T+ S++ C+ G D+A+ +++ +PD+ +Y V+INGF
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFN---------------AVFRILVENGELDRAI 386
K ++ EA LL ++ P ++N A+ + G ++ A
Sbjct: 564 NKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEAD 623
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG---HN--------- 434
+L+ M Q N YN II G G ++ +L M+ SG H+
Sbjct: 624 RVLESMLQKGYKLNEEVYNVIIHGHSKV-GNIEKAYNLYKEMLHSGFAPHSVTIMALAKS 682
Query: 435 -------------LDFTMYSC----------LLKGYCEEGNVENVMQIAHEMV 464
LD+T+ SC L+ +EGN++ V + +M
Sbjct: 683 LYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMA 735
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 146/292 (50%), Gaps = 22/292 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SY++++ R ++ A + ++V + + PDV+TY+++I+G CK + +F
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGI-SPDVATYSSLIQGLCKQRRLGEVCDLFQE 508
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+ + Y ++IN +C +G+L++A + +EM+ +G P+ +TYN +I G R
Sbjct: 509 MLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSR 568
Query: 277 VDEAKMLMAKM----------RLNGFKDNVSTHK-----SMLKGLCVVGKFDQAVGYLRN 321
EAK L+ K+ N DN + + +++KG C+ G ++A L +
Sbjct: 569 TKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLES 628
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG- 380
+++ + + Y V+I+G K+G ++A +L KEM G P + A+ + L G
Sbjct: 629 MLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
E++ LL + C + ++ G+ +G M V +++ M SG
Sbjct: 689 EVELNQLLDYTLK--SCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSG 738
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 16/189 (8%)
Query: 329 PDVKSYEVVINGFCKIGKSDE-AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P V SY +++ + +S + A + KEM G+ P V+++N + R G L+ +
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLF 224
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+M + CLPN V+YNTII C + ++ + L+ M G N + Y+ ++ G
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLR-KIGEAFKLLRLMALKGLNPNLISYNVVINGL 283
Query: 448 CEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVV 507
C EG ++ +I EM ++ V D + ++ G + F HQ +V
Sbjct: 284 CREGQMKETSEILEEMSKRR-----------YVPDRVTFNTLINGYCNVGNF---HQALV 329
Query: 508 IMERTVEDG 516
+ V++G
Sbjct: 330 LHAEMVKNG 338
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMIN--- 234
H + + PD+ TY +I G+ K + AK++ + + PN + YNT+I+
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCN 599
Query: 235 ------------GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
GFC KG + EA + + M+ +G + NE YN +I+G G +++A
Sbjct: 600 NLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYN 659
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M +GF + T ++ K L GK + L +++ + +V+I
Sbjct: 660 LYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINS 719
Query: 343 KIGKSDEAISLLKEMRARGLKP 364
K G D ++LK+M GL P
Sbjct: 720 KEGNMDAVFNVLKDMALSGLLP 741
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 205/417 (49%), Gaps = 40/417 (9%)
Query: 76 NWASN-PNPNPNKYHHTTPCYTAITDVLLSH--------------------SLISIAASL 114
NW S+ P + HT+ Y A+ + L +H S S+ A++
Sbjct: 89 NWLSSIPT-----FRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAI 143
Query: 115 LKNSN-KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK----QIENGACLYSYNSLLGVLV 169
L + + S+F L+ AY D G V AI F + QI C Y LL ++
Sbjct: 144 LDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGY----LLDKMI 199
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNL 226
NS F+ +I+ E PP V Y +I +CK G I +AK +F+ + ++P
Sbjct: 200 NSNSPVTIWTFYSEIL-EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTT 258
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
+++NT+ING CK L+E + M P+ TY+ +I+GLC GR+D A+ L +
Sbjct: 259 VSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDE 318
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M+ G + N T +++ G C + D A+ ++ + PD+ Y ++NG CK+G
Sbjct: 319 MQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
++A L+ EMR G+KP ++ + + G+L+ A+ + K M + + + V++
Sbjct: 379 VNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I G C GR++D E + M+ +G D Y+ ++ GYC++GNV+ ++ EM
Sbjct: 439 LISGFC-RDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 187/338 (55%), Gaps = 7/338 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FHQIVKE 187
LI + G+++ A F++ ++ S+N+L+ L + S L E F + ++E
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK--SRNLDEGFRLKKTMEE 286
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEE 244
N + PDV TY+ +I G CK G ++ A+++FD M ++PN + + +I+G C+ ++
Sbjct: 287 NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDS 346
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A ++M+ G +P+ + YN ++ GLC G V++A+ L+ +MR+ G K + T+ +++
Sbjct: 347 AMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLID 406
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C G + A+ + + E + D ++ +I+GFC+ G+ +A L+EM G+KP
Sbjct: 407 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 466
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++ V + G + LLK+M P ++YN ++ GLC +G+M++ L
Sbjct: 467 DDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLC-KQGQMKNANML 525
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++ M+ G D Y+ LL+G+C+ G E+++++ +E
Sbjct: 526 LEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 9/272 (3%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ T+ + YC M +A ++F L +KG+ A +
Sbjct: 94 IPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLV--------SRKGKDSAASVFAAILD 145
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G R + ++A++ +G V +A +R + F+ +L +
Sbjct: 146 TAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPV 205
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ ++E P V+ Y ++IN FCK G +A + E+R RGL+PT SFN +
Sbjct: 206 TIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLI 265
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L ++ LD L K M + P+ +Y+ +I GLC +GR+ E L D M + G
Sbjct: 266 NGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLC-KEGRLDVAEQLFDEMQQRGL 324
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ ++ L+ G C +++ M H+M+T
Sbjct: 325 RPNGITFTALIDGQCRSRRIDSAMNTYHQMLT 356
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
K D + +I Y +GNVK + + + + +YN L+ L + +K A
Sbjct: 465 KPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANM 524
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCK 238
++ V P D+ TY ++ G+CK G E+ K+ + + + Y ++++ + K
Sbjct: 525 LLEAMLNLGVTPDDI-TYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTSLVSEYNK 582
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 184/344 (53%), Gaps = 40/344 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N ++ VL + +K A+EF +++ + P+V TY T+I GYC G +E A+ +FD+
Sbjct: 193 TFNIMINVLCKEGKLKKAKEFI-GLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDL 251
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M VKP+ Y + I+G CK+G+LEEA + +M G RP +TYN +I G C G
Sbjct: 252 MKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGN 311
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ A KM G VST+ ++ L + K D+A G ++ + E + PD +Y +
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNI 371
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE------------------ 378
+ING+C+ G +A +L EM ++G++PT ++ ++ +L +
Sbjct: 372 LINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKG 431
Query: 379 -----------------NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
NG +DRA +LK+M QM +P+ V++NT++ G C +G+++
Sbjct: 432 IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRC-REGKVEAA 490
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+L++ M G D Y+ L+ GY + G++++ ++ EM++
Sbjct: 491 RELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLS 534
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 167/340 (49%), Gaps = 40/340 (11%)
Query: 164 LLGVLVRVN-SIKLAEEFFH--QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
L +L+R +K ++ F ++K V P V M+ + K E A ++ M
Sbjct: 123 LYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM 182
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+K +++ +N MIN CK+G+L++AK+ + M G +PN +TYN +I+G C GRV
Sbjct: 183 FRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRV 242
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+ A+M+ M+ G K + T+ S + G+C GK ++A G L + E + P +Y +
Sbjct: 243 EGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTL 302
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G+C G + A +M GL PTV ++N + L + ++D A ++K+M +
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGL 362
Query: 398 LPNFVSYNTIICGLCMA----------------------------------KGRMQDVED 423
+P+ V+YN +I G C +GRM+ +D
Sbjct: 363 VPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADD 422
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L ++++R G D M++ L+ G+C GN++ + EM
Sbjct: 423 LFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEM 462
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 170/333 (51%), Gaps = 12/333 (3%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
FIS + K G ++ A + K+I +YN+L+ ++++A ++ ++
Sbjct: 267 FISGMCK----EGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKM 322
Query: 185 VKENVVPPDVSTYTTMIRGY---CKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGE 241
V+E ++P VSTY +I CKM + K + P+ + YN +ING+C+ G
Sbjct: 323 VREGLMPT-VSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGN 381
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+++A +EM+++G +P +TY ++IY L GR+ +A L K+ G ++ +
Sbjct: 382 VKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNA 441
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C G D+A L+ + + + PD ++ ++ G C+ GK + A L++EM++RG
Sbjct: 442 LIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG 501
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+KP S+N + + G++ A + +M + P ++YN +I GLC +
Sbjct: 502 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNE-EGDHA 560
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
E L+ MI G + Y L++G GNVE
Sbjct: 561 EQLLKEMISKGITPNDNTYLSLIEGI---GNVE 590
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 44/295 (14%)
Query: 214 KKVFDVMTVKPNLLA------YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
++VF+ + V +L Y+ +I C+ ++A +C + M +G P+ N M
Sbjct: 103 REVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDM 162
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-N 326
+ + R ++A +L A+M K +V T M+ LC GK +A ++ +MEA
Sbjct: 163 LSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFI-GLMEALG 221
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P+V +Y +I+G+C G+ + A + M+ RG+KP +++ + + + G+L+ A
Sbjct: 222 IKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEAS 281
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG------------HN 434
+L++M ++ P V+YNT+I G C KG ++ D D+M+R G H
Sbjct: 282 GMLEKMKEIGLRPTAVTYNTLIDGYC-NKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHA 340
Query: 435 L-----------------------DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L D Y+ L+ GYC GNV+ + EM++K
Sbjct: 341 LFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISK 395
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 204/409 (49%), Gaps = 27/409 (6%)
Query: 66 TNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----KNSN-- 119
+P A FFNWAS N + H + Y + D+L + ++IA + L + SN
Sbjct: 38 ASPPKAFEFFNWASR-----NGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGS 92
Query: 120 -KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAE 178
K+ D F + L+++YG+ G AI F K + ++NSLL +L++ +A
Sbjct: 93 VKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAH 152
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING 235
F ++ V PD T+ +IRG+CK M++ + F M+ +P+++ YNT+++G
Sbjct: 153 SVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDG 212
Query: 236 FCKKGELEEAKKCMNEMMN--RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
C+ G++ A + M+ + P+ +TY ++ G C+ +DEA ++ +M G K
Sbjct: 213 LCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLK 272
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAIS 352
N T+ +++KGLC V KFD+ L + PD +Y ++N C G DEA+
Sbjct: 273 PNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALK 332
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD-------CLPNFVSYN 405
+ K+M+ ++P +++ + R L + G+ +RA L ++ D C P +YN
Sbjct: 333 MFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYN 392
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
I LC G+ E + ++++ G D Y L+ G+C+EG E
Sbjct: 393 PIFDFLC-KNGKTHKAERVFRQLMKKGTQ-DPPSYKTLIIGHCKEGTFE 439
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 177/424 (41%), Gaps = 55/424 (12%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN-SNKLSDF-----FIS 127
FF S N P+ Y + D L + IA +++K K+ D +
Sbjct: 190 FFKEMSRFNCEPD-----VVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYT 244
Query: 128 KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
L++ Y + + A+ F + +YN+L+ L V +E V
Sbjct: 245 TLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGG 304
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEE 244
PD TY T++ C G + A K+F M V+P+ Y+ +I C++G+ E
Sbjct: 305 RGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFER 364
Query: 245 AKKCMNEMMNR-------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
A++ +++ + GC P YN + LC NG+ +A+ + ++ G +D S
Sbjct: 365 AEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPS 424
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
+K+++ G C G F+ L ++ + PD ++Y ++INGF + G+ A L+ M
Sbjct: 425 -YKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERM 483
Query: 358 RARGLKPTVFSFNAVFRILVENG-----------ELDRAI------------------LL 388
P F+++ L++N +DR I L
Sbjct: 484 LKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLR 543
Query: 389 LKQMPQMDCLPN---FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+K ++ L + V +I +C G++ D + ++ + GHN+D + + +++
Sbjct: 544 IKAFQIVELLYDNGYMVDMEELIGFICQ-NGKLLDAQKMLSFCLEKGHNVDINVCNVVIE 602
Query: 446 GYCE 449
G C+
Sbjct: 603 GLCK 606
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 93/169 (55%), Gaps = 4/169 (2%)
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM-RA 359
++L+ G F++A+ + + ++P V ++ ++ K G+++ A S+ EM
Sbjct: 102 TLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGT 161
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G+ P ++FN + R +N +D K+M + +C P+ V+YNT++ GLC A G+++
Sbjct: 162 YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRA-GKVR 220
Query: 420 DVEDLVDRMIRSGHNL--DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++V M++ +L D Y+ L++GYC + ++ + + EMV++
Sbjct: 221 IAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSR 269
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 37/241 (15%)
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
NT++ + G EA K + M + G P+ +T+N+++ L GR + A +
Sbjct: 101 NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSV------ 154
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
FD+ G + PD ++ ++I GFCK DE
Sbjct: 155 ----------------------FDEMCG------TYGVTPDTYTFNILIRGFCKNSMVDE 186
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM--DCLPNFVSYNTI 407
KEM +P V ++N + L G++ A ++K M + D P+ V+Y T+
Sbjct: 187 GFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTL 246
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ G CM K + + + + M+ G + Y+ L+KG CE + + +I V +
Sbjct: 247 VRGYCM-KQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGR 305
Query: 468 G 468
G
Sbjct: 306 G 306
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 121/313 (38%), Gaps = 50/313 (15%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQ----IENGAC---LYSYNSLLGVLVRVNSIKLAEE 179
S LI+ RG+ + A F + + + C + +YN + L + AE
Sbjct: 350 SVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAER 409
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGF 236
F Q++K+ P +Y T+I G+CK G E K+ M + P+ Y +INGF
Sbjct: 410 VFRQLMKKGTQDP--PSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGF 467
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK-----MLMAKMRLNG 291
+KGE A K + M+ P +++++ L N E+ M+ K+R N
Sbjct: 468 LQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQN- 526
Query: 292 FKDNVSTH------------------------------KSMLKGLCVVGKFDQAVGYLRN 321
N+STH + ++ +C GK A L
Sbjct: 527 --INLSTHTMRLLFGSGLRIKAFQIVELLYDNGYMVDMEELIGFICQNGKLLDAQKMLSF 584
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+E N D+ VVI G CK+ + EA L + + + + L G
Sbjct: 585 CLEKGHNVDINVCNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQQLSCLEGLRTALEAGGR 644
Query: 382 LDRAILLLKQMPQ 394
+ A + K+MP
Sbjct: 645 SEEAKFVSKRMPD 657
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 170/305 (55%), Gaps = 2/305 (0%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
SL+ R K A +I++ + PDV TY +I GYCK G I+ A +V + M+
Sbjct: 145 TSLIRGFCRSGKTKKATRIM-EILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS 203
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
V P+++ YNT++ C G+L+EA + ++ + R C P+ +TY +I C + V +A
Sbjct: 204 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAM 263
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L+ +MR G K +V T+ ++ G+C G+ D+A+ +L N+ P+V ++ +++
Sbjct: 264 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSM 323
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C G+ +A LL +M +G P+V +FN + L L RAI +L++MP+ C+PN
Sbjct: 324 CSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
+SYN ++ G C K +M + ++ M+ G D Y+ LL C++G V+ ++I +
Sbjct: 384 LSYNPLLHGFCQEK-KMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILN 442
Query: 462 EMVTK 466
++ +K
Sbjct: 443 QLSSK 447
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 185/354 (52%), Gaps = 9/354 (2%)
Query: 114 LLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+L+NS + D + LI Y G + A+ + + + +YN++L L
Sbjct: 166 ILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPD---VVTYNTILRSLCDSG 222
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAY 229
+K A E + ++ P DV TYT +I C + A K+ D M KP+++ Y
Sbjct: 223 KLKEAMEVLDRQLQRECYP-DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 281
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +ING CK+G L+EA K +N M + GC+PN +T+N ++ +C GR +A+ L++ M
Sbjct: 282 NVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLR 341
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G +V T ++ LC +A+ L + + P+ SY +++GFC+ K D
Sbjct: 342 KGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDR 401
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
AI L+ M +RG P + ++N + L ++G++D A+ +L Q+ C P ++YNT+I
Sbjct: 402 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVID 461
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GL G+ + +L++ M R G D YS LL+G EG V+ ++I H+M
Sbjct: 462 GLTKV-GKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDM 514
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 170/356 (47%), Gaps = 40/356 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++++ D G +K A+ + Q E + +Y L+ + + A + ++ K+
Sbjct: 214 ILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG 273
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
PDV TY +I G CK G ++ A K + M KPN++ +N ++ C G +A
Sbjct: 274 C-KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDA 332
Query: 246 KKCMNEMMNRGCRP-----------------------------------NELTYNAMIYG 270
++ +++M+ +GC P N L+YN +++G
Sbjct: 333 ERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHG 392
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C ++D A + M G ++ T+ ++L LC GK D AV L + +P
Sbjct: 393 FCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPV 452
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ +Y VI+G K+GK++ A+ LL+EMR +GLKP + +++ + R L G++D AI +
Sbjct: 453 LITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFH 512
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
M + P+ V+YN I+ GLC A+ + + D + M+ G Y+ L++G
Sbjct: 513 DMEGLSIKPSAVTYNAIMLGLCKAQQTSRAI-DFLAYMVEKGCKPTEATYTILIEG 567
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 141/266 (53%), Gaps = 7/266 (2%)
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+R + G +E K + M + P+++A ++I GFC+ G+ ++A + M + N G
Sbjct: 113 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGA 172
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +TYN +I G C +G +D+A ++ +M + +V T+ ++L+ LC GK +A+
Sbjct: 173 VPDVITYNVLIGGYCKSGEIDKALEVLERMSV---APDVVTYNTILRSLCDSGKLKEAME 229
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L ++ PDV +Y ++I C +A+ LL EMR +G KP V ++N + +
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G LD AI L MP C PN +++N I+ +C + GR D E L+ M+R G +
Sbjct: 290 KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMC-STGRWMDAERLLSDMLRKGCSPSV 348
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
++ L+ C + + + + +M
Sbjct: 349 VTFNILINFLCRKRLLGRAIDVLEKM 374
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 106/203 (52%), Gaps = 4/203 (1%)
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
E N + L NG ++E + +M G +V S+++G C GK +A +
Sbjct: 106 EFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIME 165
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ + PDV +Y V+I G+CK G+ D+A+ +L+ M + P V ++N + R L ++G
Sbjct: 166 ILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSG 222
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+L A+ +L + Q +C P+ ++Y +I C G Q ++ L+D M + G D Y
Sbjct: 223 KLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMK-LLDEMRKKGCKPDVVTY 281
Query: 441 SCLLKGYCEEGNVENVMQIAHEM 463
+ L+ G C+EG ++ ++ + M
Sbjct: 282 NVLINGICKEGRLDEAIKFLNNM 304
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL + + A E+ +V P D+ TY T++ CK G ++ A ++ +
Sbjct: 385 SYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP-DIVTYNTLLTALCKDGKVDAAVEILNQ 443
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
++ K P L+ YNT+I+G K G+ E A + + EM +G +P+ +TY+ ++ GL G+
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGK 503
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA + M K + T+ +++ GLC + +A+ +L ++E P +Y +
Sbjct: 504 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTI 563
Query: 337 VINGF 341
+I G
Sbjct: 564 LIEGI 568
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A G V AA+ +Q L +YN+++ L +V + A E ++ ++
Sbjct: 424 LLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKG 483
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+ PD+ TY+T++RG + G ++ A K+F M ++KP+ + YN ++ G CK + A
Sbjct: 484 L-KPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRA 542
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGL 271
+ M+ +GC+P E TY +I G+
Sbjct: 543 IDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YN+LL L + + A E +Q+ + P + TY T+I G K+G E A ++
Sbjct: 418 IVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLI-TYNTVIDGLTKVGKTEYAVELL 476
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +KP+++ Y+T++ G ++G+++EA K ++M +P+ +TYNA++ GLC
Sbjct: 477 EEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 536
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ A +A M G K +T+ +++G+
Sbjct: 537 QQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 185/363 (50%), Gaps = 5/363 (1%)
Query: 104 SHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNS 163
S+S I + S+L + + + L+ AY G + A+ F +A S N
Sbjct: 140 SNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNP 199
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV- 222
+L LV+ I + E + ++++ + +V T+ +I G CK+G + A V + M
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRI-GVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAW 258
Query: 223 --KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
P+++ YNT+I+G+CK G++ +A + EM+ + PNE+T+N +I G C + V A
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
K + +M+ G + NV T+ S++ GLC GK D+A+G + + P+V +Y +ING
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
FCK EA +L ++ RGL P V +FN + + G +D A LL M PN
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+YN +I G C +G +++ L M +G D Y+ L+ C++G +++
Sbjct: 439 VSTYNCLIVGFC-REGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497
Query: 461 HEM 463
EM
Sbjct: 498 DEM 500
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 167/310 (53%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ + + A+ ++V + + P ++ T+ +I G+C+ + AKKVF+
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEI-TFNILIDGFCRDENVTAAKKVFEE 324
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++PN++ YN++ING C G+L+EA ++M G +PN +TYNA+I G C
Sbjct: 325 MQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKM 384
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA+ ++ + G NV T +++ G+ D A +++ + P+V +Y
Sbjct: 385 LKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNC 444
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I GFC+ G EA L KEM GLK + ++N + L + GE +A+ LL +M ++
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG 504
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ ++YN +I G +G ++ M + G + Y+ L+KG+C +G +E
Sbjct: 505 LNPSHLTYNALIDGY-FREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEA 563
Query: 457 MQIAHEMVTK 466
++ +EM+ K
Sbjct: 564 NRLLNEMLEK 573
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 163/300 (54%), Gaps = 5/300 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ R ++ A++ F ++ ++ + P+V TY ++I G C G ++ A + D
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGL-QPNVVTYNSLINGLCSNGKLDEALGLQDK 359
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ +KPN++ YN +INGFCKK L+EA++ ++++ RG PN +T+N +I GR
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D+A +L + M G NVST+ ++ G C G +A + + + D+ +Y +
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++ CK G++ +A+ LL EM GL P+ ++NA+ G A+ + M +
Sbjct: 480 LVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKG 539
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
N V+YN +I G C KG++++ L++ M+ G + T Y L E+G + ++
Sbjct: 540 RRANIVTYNVLIKGFC-NKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDI 598
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 158/298 (53%), Gaps = 7/298 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + NV AA F + ++ + +YNSL+ L ++ KL E Q
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLC--SNGKLDEALGLQDKMSG 362
Query: 189 V-VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEE 244
+ + P+V TY +I G+CK M++ A+++ D + + PN++ +NT+I+ + K G +++
Sbjct: 363 MGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDD 422
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + M++ G PN TYN +I G C G V EA+ L +M NG K ++ T+ ++
Sbjct: 423 AFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVD 482
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
LC G+ +AV L + E +NP +Y +I+G+ + G S A+++ M +G +
Sbjct: 483 ALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRA 542
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+ ++N + + G+L+ A LL +M + +PN +Y+ I+ M KG + D++
Sbjct: 543 NIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD-ILRDEMMEKGFIPDID 599
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 8/199 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI AYG G + A + ++ ++ G C + +YN L+ R ++K A + ++ +
Sbjct: 410 LIDAYGKAGRMDDA--FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEM-E 466
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
N + D+ TY ++ CK G A ++ D M + P+ L YN +I+G+ ++G
Sbjct: 467 GNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNST 526
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A M +G R N +TYN +I G C G+++EA L+ +M G N +T+ +
Sbjct: 527 AALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILR 586
Query: 304 KGLCVVGKFDQAVGYLRNV 322
+ G G+L NV
Sbjct: 587 DEMMEKGFIPDIDGHLYNV 605
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++ + K G+ D A+ G + + S N + LV+ G + + K+M +
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
N V+++ +I GLC G+ Q D+V+ M G + Y+ ++ GYC+ G +
Sbjct: 223 RRIGVNVVTFDVVINGLCKV-GKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMF 281
Query: 455 NVMQIAHEMVTKK 467
+ EMV K+
Sbjct: 282 KADALLKEMVAKR 294
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 227/472 (48%), Gaps = 45/472 (9%)
Query: 33 PQNPSPKN-------------ISSQP-----LDQFSLCLGSNIVTKVIYEQTNPYHALFF 74
PQN P++ I+S+P L + + V + + +P AL F
Sbjct: 38 PQNSRPRSRNASKTAKTIANLINSKPFSNGLLSSLLITISKTTVLRTLRLIKDPSKALRF 97
Query: 75 FNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL-------KNSNKLSDFFIS 127
F W + HT Y + ++L +++A + L K + KL D F +
Sbjct: 98 FKWTQQKG-----FSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFN 152
Query: 128 KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
LI++Y + G K ++ F K I + ++NSL+ +L++ +A+E + +++
Sbjct: 153 SLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGT 212
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEE 244
V PD TY +IRG+CK M++ + F M +++ YNT+++G C+ G++
Sbjct: 213 YGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRI 272
Query: 245 AKKCMNEMMNR--GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
A+ +N M + G PN +TY +I G C+ V+EA +++ +M G K N+ T+ ++
Sbjct: 273 ARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTL 332
Query: 303 LKGLCVVGKFDQAVGYL-RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+KGLC K D+ L R + +PD ++ +I+ C G DEA+ + + M+
Sbjct: 333 VKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFR 392
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL-------PNFVSYNTIICGLCMA 414
+ S++ + R L + G+ D A L ++ + + L P SYN I LC
Sbjct: 393 IPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLC-E 451
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G+ + E ++ ++++ G D Y+ ++ G+C+EG E+ ++ M+ +
Sbjct: 452 HGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEGAYESGYELLMWMLRR 502
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/417 (19%), Positives = 178/417 (42%), Gaps = 48/417 (11%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFF------ISKLIKAYGDRGNVKAAIFWFHQ 148
Y + D L + IA +L+ K + + LI+ Y + V+ A+ +
Sbjct: 257 YNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEE 316
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
+ +YN+L+ L + + ++ ++ + PD T+ T+I +C G
Sbjct: 317 MTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAG 376
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR-------GCR 258
++ A KVF+ M + + +Y+T+I C+KG+ + A++ +E+ + G +
Sbjct: 377 NLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSK 436
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P +YN + LC +G+ +A+ ++ ++ G +D S + +++ G C G ++
Sbjct: 437 PLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQS-YTTVIMGHCKEGAYESGYEL 495
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
L ++ + PD++ Y+ +I+GF + K A L++M +P ++++V L+E
Sbjct: 496 LMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLE 555
Query: 379 NGELDRAILLLKQMPQMDCLPNF-VSYNTI--------------ICGLCMAKGRMQDVED 423
G + ++ M + + N +S ++ I L G +E+
Sbjct: 556 KGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYYVKIEE 615
Query: 424 LVDRMIRSG----------------HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ +++ G N+D + + + C+ V + +E+V
Sbjct: 616 VAQFLLKRGKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSLCYELV 672
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 114/274 (41%), Gaps = 37/274 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN + L K AE Q++K P +YTT+I G+CK G E+ ++
Sbjct: 441 SYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQ--SYTTVIMGHCKEGAYESGYELLMW 498
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P++ Y+ +I+GF +K + AK+ + +M+ +P T+++++ L G
Sbjct: 499 MLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGC 558
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLK-------------------------------- 304
E+ ++ M + N++ L+
Sbjct: 559 AHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYYVKIEEVAQ 618
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
L GK +A L +E + N D+ I CKI K EA SL E+ GL
Sbjct: 619 FLLKRGKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSLCYELVENGLHQ 678
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
+ + + L E G+ + A + K++P++D L
Sbjct: 679 ELTCLDDLIAALEEGGKREEAAFISKRLPRLDNL 712
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 45/254 (17%)
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
TVK +N++I + + G +E+ K M + P+ +T+N+++ L GR + A
Sbjct: 143 TVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMA 202
Query: 281 KMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
K + +M G + T+ +++G C D+ + R + N + DV +Y +++
Sbjct: 203 KEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVD 262
Query: 340 GFCKIGKSDEAISLLKEM--RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
G C+ GK A +L+ M + GL P
Sbjct: 263 GLCRAGKVRIARNLVNGMGKKCEGLNP--------------------------------- 289
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
N V+Y T+I G CM Q+VE+ +++ M G + Y+ L+KG CE ++
Sbjct: 290 --NVVTYTTLIRGYCMK----QEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLD 343
Query: 455 NVMQIAHEMVTKKG 468
+ + M + G
Sbjct: 344 KMKDVLERMKSDGG 357
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 216/438 (49%), Gaps = 29/438 (6%)
Query: 39 KNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAI 98
K S + L F+ L V + + P A FFNW + H Y +
Sbjct: 69 KPWSDELLSSFTTSLSKTTVFQTLRHIKVPTKAFLFFNWIHEKG-----FSHNPQTYFIM 123
Query: 99 TDVLLSHSLISIAASLL----KNSN---KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQ 151
++L ++IA + L K SN KL D F + LI++YG+ G K ++ F K
Sbjct: 124 LEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKL 183
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I + ++NS+L VL++ +A+E + +++K V PD TY +IRG+CK M++
Sbjct: 184 IGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVD 243
Query: 212 NAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR---PNELTYN 265
F MT P+++ YNT+++G C+ G+++ A +N M++ C+ P+ +TY
Sbjct: 244 EGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNG-MSKKCKDLSPDVVTYT 302
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM-E 324
+I G C VDEA ++ +M G K N+ T+ +++KGLC K+D+ L + +
Sbjct: 303 TLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGD 362
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
PD ++ +IN C G DEA + + M+ + S++ + R L + G+ +
Sbjct: 363 GGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGK 422
Query: 385 AILLLKQMPQMDCL-------PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
A +L ++ + + L P SY + LC G+ + E ++ ++++ G D
Sbjct: 423 AEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLC-ENGKTKKAERVLRQLMKRGTQ-DP 480
Query: 438 TMYSCLLKGYCEEGNVEN 455
Y ++ G+C+EG+ EN
Sbjct: 481 LSYQIVILGHCKEGSYEN 498
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/445 (19%), Positives = 184/445 (41%), Gaps = 55/445 (12%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN-SNKLSDF---- 124
+FF ++ + +P+ Y + D L I +A +L+ S K D
Sbjct: 244 EGFYFFKEMTSFDCDPD-----VVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDV 298
Query: 125 -FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ LI+ Y + V A+ + + +YN+L+ L +E Q
Sbjct: 299 VTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQ 358
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKG 240
+ + PD T+ T+I +C G ++ A KVF+ M V + +Y+ +I C+KG
Sbjct: 359 MKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKG 418
Query: 241 ELEEAKKCMNEMMNR-------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+ +A+ +E+ + G +P +Y M LC NG+ +A+ ++ ++ G +
Sbjct: 419 DYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQ 478
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
D +S ++ ++ G C G ++ G L ++ + PD+ Y+ +I+GF + K A
Sbjct: 479 DPLS-YQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKET 537
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
L++M KP +++++ L+E G + + ++ M + + N ++++T L
Sbjct: 538 LEKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIRQN-INFSTKCLQLLF 596
Query: 414 AKGRMQDVEDLVDRMIRSG--------------------------------HNLDFTMYS 441
+G + + + ++G N+D + +
Sbjct: 597 DRGLQDKAFKITELIYKNGFCVKMDEVVQFLCNKRRALEACKLLLFSLKNNENIDIGLCN 656
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTK 466
++ C+ + +E+V K
Sbjct: 657 IVILDLCKLNKASEAFSLCYELVDK 681
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
+N++I G E+ L M+L G V T S+L L G+ + A ++
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217
Query: 324 EA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ + PD +Y ++I GFCK DE KEM + P V ++N + L G++
Sbjct: 218 KTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKI 277
Query: 383 DRAILLLKQMPQM--DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
A L+ M + D P+ V+Y T+I G C K + + D+++ M G + Y
Sbjct: 278 KVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYC-RKQEVDEALDILEEMNGRGLKPNIVTY 336
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ L+KG CE + + +I +M G +
Sbjct: 337 NTLIKGLCEAQKWDKMKEILEQMKGDGGSI 366
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 131/341 (38%), Gaps = 75/341 (21%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI ++ GN+ A F K++E A SY+ L+ L + AE F ++ ++
Sbjct: 375 LINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKE 434
Query: 189 VV------PPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFCKKG 240
++ P ++Y M + C+ G + A++V + + + L+Y +I G CK+G
Sbjct: 435 ILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSYQIVILGHCKEG 494
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
E + M+ R P+ Y+ +I G + AK + KM + +K ST
Sbjct: 495 SYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWH 554
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDV-----------------KSYEVV----IN 339
S+L L G ++ G + ++E N+ ++ K++++ N
Sbjct: 555 SILNRLLEQGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFDRGLQDKAFKITELIYKN 614
Query: 340 GFC----------------------------------------------KIGKSDEAISL 353
GFC K+ K+ EA SL
Sbjct: 615 GFCVKMDEVVQFLCNKRRALEACKLLLFSLKNNENIDIGLCNIVILDLCKLNKASEAFSL 674
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
E+ +GL + N + L G + A + K++P+
Sbjct: 675 CYELVDKGLHQDLICLNDLVAALEAGGRTEEAAFISKRVPR 715
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 163/284 (57%), Gaps = 1/284 (0%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGEL 242
+I++ + PDV TY +I GYCK G I+ A +V + M+V P+++ YNT++ C G+L
Sbjct: 166 EILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKL 225
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+EA + ++ M R C P+ +TY +I C + V +A L+ +MR G K +V T+ +
Sbjct: 226 KEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVL 285
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G+C G+ D+A+ +L N+ P+V ++ +++ C G+ +A LL +M +G
Sbjct: 286 INGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGC 345
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P+V +FN + L L RAI +L++MP+ C+PN +SYN ++ G C K +M
Sbjct: 346 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEK-KMDRAI 404
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ ++ M+ G D Y+ LL C++G + ++I +++ +K
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK 448
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 183/354 (51%), Gaps = 9/354 (2%)
Query: 114 LLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+L+NS + D + LI Y G + A+ + + + +YN++L L
Sbjct: 167 ILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPD---VVTYNTILRSLCDSG 223
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAY 229
+K A E + ++ P DV TYT +I C + A K+ D M KP+++ Y
Sbjct: 224 KLKEAMEVLDRQMQRECYP-DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 282
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +ING CK+G L+EA K +N M GC+PN +T+N ++ +C GR +A+ L+A M
Sbjct: 283 NVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLR 342
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G +V T ++ LC +A+ L + + P+ SY +++GFC+ K D
Sbjct: 343 KGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDR 402
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
AI L+ M +RG P + ++N + L ++G+ D A+ +L Q+ C P ++YNT+I
Sbjct: 403 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVID 462
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GL G+ + +L++ M R G D YS LL+G EG V+ ++I H+M
Sbjct: 463 GLTKV-GKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDM 515
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 169/356 (47%), Gaps = 40/356 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++++ D G +K A+ + Q E + +Y L+ + + A + ++ K+
Sbjct: 215 ILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG 274
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEA 245
PDV TY +I G CK G ++ A K + M + +PN++ +N ++ C G +A
Sbjct: 275 C-KPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDA 333
Query: 246 KKCMNEMMNRGCRP-----------------------------------NELTYNAMIYG 270
++ + +M+ +GC P N L+YN +++G
Sbjct: 334 ERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHG 393
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C ++D A + M G ++ T+ ++L LC GK D AV L + +P
Sbjct: 394 FCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPV 453
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ +Y VI+G K+GK++ A LL+EMR +GLKP + +++ + R L G++D AI +
Sbjct: 454 LITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFH 513
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
M + P+ V+YN I+ GLC A+ + + D + M+ G Y+ L++G
Sbjct: 514 DMEGLSIKPSAVTYNAIMLGLCKAQQTSRAI-DFLAYMVEKGCKPTKATYTILIEG 568
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 140/266 (52%), Gaps = 7/266 (2%)
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+R + G +E K + M + P+++A ++I GFC+ G+ +A + M + N G
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGA 173
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +TYN +I G C +G +D+A ++ +M + +V T+ ++L+ LC GK +A+
Sbjct: 174 VPDVITYNVLIGGYCKSGEIDKALQVLERMSV---APDVVTYNTILRSLCDSGKLKEAME 230
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L M+ PDV +Y ++I C +A+ LL EMR +G KP V ++N + +
Sbjct: 231 VLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G LD AI L MP C PN +++N I+ +C + GR D E L+ M+R G +
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMC-STGRWMDAERLLADMLRKGCSPSV 349
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
++ L+ C + + + + +M
Sbjct: 350 VTFNILINFLCRKRLLGRAIDVLEKM 375
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 106/203 (52%), Gaps = 4/203 (1%)
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
E N + L NG ++E + +M G +V S+++G C GK +A +
Sbjct: 107 EFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIME 166
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ + PDV +Y V+I G+CK G+ D+A+ +L+ M + P V ++N + R L ++G
Sbjct: 167 ILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSG 223
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+L A+ +L + Q +C P+ ++Y +I C G Q ++ L+D M + G D Y
Sbjct: 224 KLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMK-LLDEMRKKGCKPDVVTY 282
Query: 441 SCLLKGYCEEGNVENVMQIAHEM 463
+ L+ G C+EG ++ ++ + M
Sbjct: 283 NVLINGICKEGRLDEAIKFLNNM 305
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 4/185 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL + + A E+ +V P D+ TY T++ CK G + A ++ +
Sbjct: 386 SYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP-DIVTYNTLLTALCKDGKADAAVEILNQ 444
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
++ K P L+ YNT+I+G K G+ E A + + EM +G +P+ +TY+ ++ GL G+
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK 504
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA + M K + T+ +++ GLC + +A+ +L ++E P +Y +
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564
Query: 337 VINGF 341
+I G
Sbjct: 565 LIEGI 569
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A G AA+ +Q L +YN+++ L +V + A E ++ ++
Sbjct: 425 LLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKG 484
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+ PD+ TY+T++RG G ++ A K+F M ++KP+ + YN ++ G CK + A
Sbjct: 485 L-KPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRA 543
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGL 271
+ M+ +GC+P + TY +I G+
Sbjct: 544 IDFLAYMVEKGCKPTKATYTILIEGI 569
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 198/382 (51%), Gaps = 25/382 (6%)
Query: 92 TPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFH 147
T Y+ + +L + S + A L +K+++ + D F + LI ++ G ++ A WF
Sbjct: 480 TSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ + + +Y +L+ ++ + A E F ++ E +P +V TYT +I G+CK
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP-NVVTYTALIDGHCKS 598
Query: 208 GMIENAKKVF-------DVMTVK------------PNLLAYNTMINGFCKKGELEEAKKC 248
G IE A +++ D+ V PN+ Y +++G CK +++EA+
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ M GC PN + Y+A+I G C G++DEA+M+ KM G+ NV T+ S++ L
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+ D A+ L ++E + P+V Y +I+G CK+GK+DEA L+ M +G P V +
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ A+ + G++D+ + L++QM C PNFV+Y +I C A G + D L+D M
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI-NHCCAAGLLDDAHQLLDEM 837
Query: 429 IRSGHNLDFTMYSCLLKGYCEE 450
++ Y +++G+ E
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNRE 859
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 190/468 (40%), Gaps = 55/468 (11%)
Query: 46 LDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSH 105
L QF L +V V+ NP + FF WA Y HT P Y A+ +VL
Sbjct: 120 LRQFREKLNETLVVDVLSLVKNPELGVKFFIWAGRQI----GYGHTGPVYHALLEVLGCG 175
Query: 106 SLISIAASLLKNSNKLSDFFISKL----IKAYGDRGNVKAAIFWFHQAKQIENGACLYSY 161
+ L+ + KL I+ G A+ + K + +Y
Sbjct: 176 GNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTY 235
Query: 162 NSLLGVLVRVNSIKLAEE-------------------FFH------------QIVKENVV 190
N+L+ V + + + A F H ++++
Sbjct: 236 NALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF 295
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKK 247
D YT MI G C+ + E A M + PN++ Y ++ G +K +L K+
Sbjct: 296 KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
++ M+ GC P+ +N++I+ C +G A L+ KM G + + ++ G+C
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415
Query: 308 ---------VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
V+ ++A G +++A++ + + + C GK ++A S+++EM
Sbjct: 416 GNEKLPSLDVLELAEKAYG---EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMM 472
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
++G P +++ V +L ++D A LL ++M +P+ +Y +I C G +
Sbjct: 473 SKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKV-GLL 531
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Q D M+R G + Y+ L+ Y + + + ++ M+++
Sbjct: 532 QQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 142/324 (43%), Gaps = 46/324 (14%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y ++ L + + A +F ++ + +P +V TY ++ G + + K++ +M
Sbjct: 302 YTQMISGLCEASLFEEAMDFLSRMRSSSCIP-NVVTYRILLCGCLRKRQLGRCKRILSMM 360
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN--- 274
+ P+ +N++I+ +C+ G+ A K + +M + GC+P + YN +I G+C N
Sbjct: 361 ITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420
Query: 275 --------------------------------------GRVDEAKMLMAKMRLNGFKDNV 296
G+ ++A ++ +M GF +
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
ST+ ++ LC K D A + ++ PDV +Y ++I+ FCK+G +A E
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M G P V ++ A+ ++ ++ A L + M C+PN V+Y +I G C + G
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS-G 599
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMY 440
+++ + RM + D MY
Sbjct: 600 QIEKACQIYARMRGNADIPDVDMY 623
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 149/328 (45%), Gaps = 27/328 (8%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC------KMGMIENAK 214
+NSL+ R A + ++ + P Y +I G C + ++E A+
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKM-GDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
K + M V N + + + C G+ E+A + EMM++G P+ TY+ +I L
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +VD A +L +M+ N +V T+ ++ C VG QA + ++ P+V
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I+ + K K A L + M + G P V ++ A+ ++G++++A + +
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
Query: 392 M------PQMDCL----------PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
M P +D PN +Y ++ GLC A ++++ DL+D M G
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAH-KVKEARDLLDVMSVEGCEP 669
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ +Y L+ G+C+ G ++ + +M
Sbjct: 670 NHIVYDALIDGFCKVGKLDEAQMVFTKM 697
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 104/283 (36%), Gaps = 56/283 (19%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA----ASLLKNSNKLSDFF 125
A F S PN Y Y+++ D L + +A + +L+NS +
Sbjct: 689 EAQMVFTKMSERGYGPNVYT-----YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFH 182
+++I G A + +E C + +Y +++ + + E
Sbjct: 744 YTEMIDGLCKVGKTDEA---YRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMR 800
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---------------------- 220
Q+ + P V TY +I C G++++A ++ D M
Sbjct: 801 QMGAKGCAPNFV-TYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE 859
Query: 221 --------------TVKPNLLAYNTMINGFCKKGELE---EAKKCMNEMMNRGCRPNELT 263
P + AY +I+ FCK G LE E K M+ + +L
Sbjct: 860 FIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDL- 918
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
Y+++I L + +VD+A L A M G +S ++KGL
Sbjct: 919 YSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGL 961
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 176/324 (54%), Gaps = 8/324 (2%)
Query: 150 KQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
K++E C + +YN ++ L + + A +F ++V + + PPDV TYTT++ G C
Sbjct: 292 KRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGI-PPDVVTYTTILHGLCY 350
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+G + A ++F M KP+++AYNT+I+ CK + +A + ++EM++RG PN +T
Sbjct: 351 LGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVT 410
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y+ +++G C G++DEA L +M N T ++ GLC G +A +
Sbjct: 411 YSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMT 470
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
E + P++ +Y ++NG+C K +EA + + M +G P + S+N + + +D
Sbjct: 471 EKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMD 530
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+A LL QM PN V+YNTI+ GLC GR+ D ++L +M SG YS L
Sbjct: 531 KAKALLTQMSVKKLTPNTVTYNTIMKGLCYV-GRLLDAQELFKKMCSSGMLPTLMTYSIL 589
Query: 444 LKGYCEEGNVENVMQIAHEMVTKK 467
L G C+ G+++ +++ M KK
Sbjct: 590 LNGLCKHGHLDEALKLFKSMKEKK 613
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 171/312 (54%), Gaps = 6/312 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +L+ + IK+A E ++++V+ PDV +Y T+I G C G A VF
Sbjct: 165 TFTTLINGVCNEGKIKVAVELYNEMVRSGH-EPDVISYNTLINGLCNSGNTNMAVHVFKK 223
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M KPN++ YNT+I+ CK + +A ++EM+ RG P+ +TYN++++GLC G+
Sbjct: 224 MEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQ 283
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EA L +M NG K +V T+ ++ L + A +L +++ + PDV +Y
Sbjct: 284 LNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTT 343
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G C +G+ +EAI L K+M +G KP V ++N + L ++ ++ A+ L +M
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG 403
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V+Y+TI+ G C G++ + L M+ + +S L+ G C+EG V
Sbjct: 404 IPPNAVTYSTILHGFC-NLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEA 462
Query: 457 MQIAHEMVTKKG 468
+ E +T+KG
Sbjct: 463 RWV-FETMTEKG 473
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 179/345 (51%), Gaps = 11/345 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI + GN A+ H K++E C + +YN+++ L + + A +F ++V
Sbjct: 204 LINGLCNSGNTNMAV---HVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMV 260
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ PPD TY +++ G C +G + A ++F M KP+++ YN +I+ K +
Sbjct: 261 GRGI-PPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLV 319
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+A ++EM+++G P+ +TY +++GLC G+++EA L KM G K +V + ++
Sbjct: 320 NDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTI 379
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ LC + A+ +L +++ + P+ +Y +++GFC +G+ DEA L KEM R +
Sbjct: 380 IDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNV 439
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P +F+ + L + G + A + + M + PN +YN ++ G C+ + +M +
Sbjct: 440 MPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCL-RCKMNEAR 498
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ + M+ G D Y+ L+ GYC ++ + +M KK
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 155/279 (55%), Gaps = 5/279 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+++L + + A + F ++V NV+P + T++ ++ G C+ GM+ A+ VF+
Sbjct: 410 TYSTILHGFCNLGQLDEATQLFKEMVGRNVMP-NTLTFSILVDGLCQEGMVSEARWVFET 468
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT V+PN+ YN ++NG+C + ++ EA+K M+ +GC P+ +YN +I G C + R
Sbjct: 469 MTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRR 528
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D+AK L+ +M + N T+ +++KGLC VG+ A + + + M P + +Y +
Sbjct: 529 MDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSI 588
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++NG CK G DEA+ L K M+ + L+P + + + + G+L+ A L ++
Sbjct: 589 LLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADG 648
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
P +YN +I GL + +G + +L + HN+
Sbjct: 649 IQPPGRTYNVMIKGL-LKEGLSDEAYELFRKWKMMKHNV 686
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 189/400 (47%), Gaps = 48/400 (12%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
+V A+ F++ ++ + + LG + ++ +Q+ V V +
Sbjct: 73 SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTH-TVYSL 131
Query: 198 TTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+I C++ ++ A V+ M ++P+++ + T+ING C +G+++ A + NEM+
Sbjct: 132 NILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVR 191
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
G P+ ++YN +I GLC +G + A + KM NG K NV T+ +++ LC +
Sbjct: 192 SGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVND 251
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+ +L ++ + PD +Y +++G C +G+ +EA L K M G KP V ++N +
Sbjct: 252 AMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIID 311
Query: 375 ILVEN-----------------------------------GELDRAILLLKQMPQMDCLP 399
L ++ G+L+ AI L K+M Q C P
Sbjct: 312 SLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKP 371
Query: 400 NFVSYNTIICGLCMAKGRM-QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
+ V+YNTII LC K R+ D + + M+ G + YS +L G+C G ++ Q
Sbjct: 372 DVVAYNTIIDSLC--KDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQ 429
Query: 459 IAHEMVTKKGRLLKLKNFLTR--VVDALLLMWIVTGGSWI 496
+ EMV GR + + N LT +VD L +V+ W+
Sbjct: 430 LFKEMV---GRNV-MPNTLTFSILVDGLCQEGMVSEARWV 465
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 173/345 (50%), Gaps = 40/345 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
+Y SL+ L NS A E F + + PP TY MI CK GM+E A KK
Sbjct: 47 AYTSLIHGLCMANSFDDARELFADMNRRGC-PPSPVTYNVMIDASCKRGMLEEACDLIKK 105
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ + V P+++ YNT+++G CK +EEA NEM GC PN ++N +I GLC
Sbjct: 106 MIEDGHV-PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQS 164
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++D+A + +M + ++ ++ GL GK ++A + ++++ + P +Y
Sbjct: 165 KIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYN 224
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
VVI+G C DEA+ L K MR++G +P+ F+FN + + G+LD A LLK+M
Sbjct: 225 VVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDD 284
Query: 396 DCLPNFVSYNTIICGLC--------------MAK--------------------GRMQDV 421
+P+ V+Y+T+I GLC M K GR+++
Sbjct: 285 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+++D M+ SG + D Y+ L+ G+C G E ++ +MV +
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 162/312 (51%), Gaps = 5/312 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+SY L+ L + + A F +++ V P V+ YT++I G C ++A+++F
Sbjct: 11 WSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVA-YTSLIHGLCMANSFDDARELFA 69
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + P+ + YN MI+ CK+G LEEA + +M+ G P+ +TYN ++ GLC +
Sbjct: 70 DMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSS 129
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
RV+EA +L +M G N +H +++ GLC K DQA + ++ PD SY
Sbjct: 130 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYG 189
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++I+G K GK +EA L + M G+ P+ ++N V + LD A+ L K M
Sbjct: 190 ILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C P+ ++N +I C +G++ + L+ RM GH D YS L+ G C V++
Sbjct: 250 GCRPSRFTFNILIDAHC-KRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 308
Query: 456 VMQIAHEMVTKK 467
+ +MV ++
Sbjct: 309 ARHLLEDMVKRQ 320
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 174/329 (52%), Gaps = 5/329 (1%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V+ A+ F++ +++ S+N+++ L + + I A + FH++ +++ PPD +Y
Sbjct: 131 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI-PPDSWSYG 189
Query: 199 TMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
+I G K G + A K+F M + P+ + YN +I+G C L+EA + M ++
Sbjct: 190 ILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
GCRP+ T+N +I C G++DEA L+ +M +G +V T+ +++ GLC + + D A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
L ++++ P V + +I+G CK G+ EA +L M + G P V ++N +
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
G+ +RA LL M PN V+Y ++ GLC A R+ + + +M SG
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN-RLPEACGVFAQMKSSGCAP 428
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ Y+ L+ G+C G V+ +++ EMV
Sbjct: 429 NLFTYTALILGFCSAGQVDGGLKLFGEMV 457
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 164/323 (50%), Gaps = 7/323 (2%)
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+F +AK I + +SY L+ L + + A + F +++ + P V TY +I
Sbjct: 172 VFHEMEAKDIPPDS--WSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAV-TYNVVIH 228
Query: 203 GYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
G C ++ A ++F M K P+ +N +I+ CK+G+L+EA + + M + G P
Sbjct: 229 GMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVP 288
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TY+ +I GLC RVD+A+ L+ M K V T +++ GLC G+ +A L
Sbjct: 289 DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL 348
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
++ + +PDV +Y +++G C+ G+++ A LL +M ARGL P V ++ A+ L +
Sbjct: 349 DAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKA 408
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
L A + QM C PN +Y +I G C A G++ L M+ +G + D +
Sbjct: 409 NRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA-GQVDGGLKLFGEMVCAGISPDHVV 467
Query: 440 YSCLLKGYCEEGNVENVMQIAHE 462
Y L C+ G ++I E
Sbjct: 468 YGTLAAELCKSGRSARALEILRE 490
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 166/326 (50%), Gaps = 16/326 (4%)
Query: 113 SLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
S+ + S F + LI A+ RG + A + + + +Y++L+ L +
Sbjct: 245 SMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAY 229
+ A +VK P V T T+I G CK G I+ A++V D M P+++ Y
Sbjct: 305 RVDDARHLLEDMVKRQC-KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
NT+++G C+ G+ E A++ +++M+ RG PN +TY A++ GLC R+ EA + A+M+
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+G N+ T+ +++ G C G+ D + ++ A ++PD Y + CK G+S
Sbjct: 424 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 483
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRI----LVENGELDRAILLLKQMPQMDCLPNFVSYN 405
A+ +L+E R L+ + + V+R L+E G+++ A+ ++ M + LP
Sbjct: 484 ALEILREGR-ESLRSEAWG-DEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCA 541
Query: 406 TIICGLCM------AKGRMQDVEDLV 425
+++ GLC A+ ++++ DL
Sbjct: 542 SLVAGLCKSGQGGEARAVLEEIMDLA 567
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 213/415 (51%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P N N + HT Y + L +H ++S A SL++
Sbjct: 3 FFTWLSSP-ANSN-FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S LI AY + G ++ AI + ++ + + + +L L+++
Sbjct: 61 ILETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++
Sbjct: 121 KYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D+A L +M
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLKP ++ + + G+LD A K+M Q + + V+Y +I
Sbjct: 300 QAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLCQ-EGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 224/448 (50%), Gaps = 23/448 (5%)
Query: 24 ITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNP 83
+ S++ + P P+ +PL F L NI+T VI E+ N FF WAS
Sbjct: 37 VISILAKKKPIEPAL-----EPLVPF---LSKNIITSVIKEEVNRQLGFRFFIWASR--- 85
Query: 84 NPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK----LSDFFISKLIKAYGDRGNV 139
+ + + + D+L + + L+ + + LI AY G
Sbjct: 86 --RERLRSGESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLA 143
Query: 140 KAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSI-KLAEEFFHQIVKENVVPPDVSTYT 198
+ A+ F + K+ + +++YN +L +++R + LA +++++K N P++ T+
Sbjct: 144 EKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNC-SPNLYTFG 202
Query: 199 TMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
++ G K G +A+K+FD MT + PN + Y +I+G C++G E+A+K EM
Sbjct: 203 ILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKAS 262
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G P+ + +NA++ G C GR+ EA L+ +GF + + S++ GL ++ QA
Sbjct: 263 GNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQA 322
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
N+++ N+ PD+ Y ++I G K GK ++A+ LL+ M ++G+ P + +NAV +
Sbjct: 323 FELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKA 382
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L G L+ L +M + + P+ ++ +IC +C G ++ E++ + +SG +
Sbjct: 383 LCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC-RNGLVRKAEEIFLEIEKSGCSP 441
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ L+ G C+ G ++ + H+M
Sbjct: 442 SVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 170/396 (42%), Gaps = 85/396 (21%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IKA RG ++ + + E+ ++ L+ + R ++ AEE F +I K
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSG 438
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAK-----------------------KVFDVMTVK-- 223
P V+T+ +I G CK G ++ A+ + FD M
Sbjct: 439 C-SPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGS 497
Query: 224 -----------------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
P++++YN +INGFC++G+++ A K +N + +G P+ +TYN
Sbjct: 498 ILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNT 557
Query: 267 MIYGLCINGRVDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK----FDQAVGY--- 318
+I GL GR +EA K+ AK + F+ + + ++S++ C K F+ + Y
Sbjct: 558 LINGLHRVGREEEAFKLFYAK---DDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKK 614
Query: 319 ------------------------LRNVMEANMNPD---VKSYEVVINGFCKIGKSDEAI 351
LR ++E + D + Y + + G C+ G+ EA+
Sbjct: 615 ISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEAL 674
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI--LLLKQMPQMDCLPNFVSYNTIIC 409
+ +R + + T S + L + +LD AI L +P +Y ++
Sbjct: 675 MVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIDVFLYTLDNNFKLMPRVCNY--LLS 732
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L ++ +M+ V L +RM R+G+++D + LL+
Sbjct: 733 SLLQSREKMEIVSQLTNRMERAGYDVDSMLRFELLR 768
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 184/364 (50%), Gaps = 40/364 (10%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
+AA + + ++ + +Y++N ++ VL + +K A++F + + + V P++ TY
Sbjct: 202 TEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM-ETSGVKPNIVTYN 260
Query: 199 TMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
T++ GYC G +E A + M ++P+ Y ++I+G CK+G LEEA K EM+ +
Sbjct: 261 TIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK 320
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G RP+ + YN +I G C G +D A +M G +ST+ S++ L + + D+A
Sbjct: 321 GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEA 380
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT---------- 365
++ + E ++PD +Y ++ING+C+ + +A L EM A G+KPT
Sbjct: 381 ECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHV 440
Query: 366 -------------------------VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
V FNA+ N + A LLK M +M P+
Sbjct: 441 LSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPD 500
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V++NTI+ G C +G++++ +L D M R G D ++ L+ GY G++++ ++
Sbjct: 501 EVTFNTIMQGHC-REGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559
Query: 461 HEMV 464
+EM+
Sbjct: 560 NEML 563
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 163/359 (45%), Gaps = 46/359 (12%)
Query: 129 LIKAYGDRGNVKAA--IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
++ Y G V+AA I + ++IE + ++Y SL+ + + ++ A + F ++V+
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDS--FTYGSLISGMCKQGRLEEASKIFEEMVQ 319
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----------------------- 223
+ + P V Y T+I G+C G ++ A D M K
Sbjct: 320 KGLRPSAV-IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD 378
Query: 224 ---------------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
P+ + YN +ING+C+ ++A +EM+ G +P + TY +++
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
+ L R+ EA L K+ G +V +++ G C A L+++ +
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PD ++ ++ G C+ GK +EA L EM+ RG+KP SFN + G++ A +
Sbjct: 499 PDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV-EDLVDRMIRSGHNLDFTMYSCLLKG 446
+M P ++YN ++ GLC K + D+ E+L+ M+ G D T Y L++G
Sbjct: 559 RNEMLDTGFNPTVLTYNALVQGLC--KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEG 615
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 12/290 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + ++GN+ A + + + + +YNSL+ L AE +I +E
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI-QEK 390
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVM---TVKPNLLAYNTMINGFCKKGEL 242
+ PD TY +I GYC+ NAKK F D M +KP Y ++++ KK +
Sbjct: 391 GISPDAITYNILINGYCRCA---NAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKS 301
+EA ++ + G P+ + +NA+I G C N V A L+ M R+ D V T +
Sbjct: 448 KEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEV-TFNT 506
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+++G C GK ++A + + PD S+ +I+G+ + G +A + EM G
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
PTV ++NA+ + L +N E D A LLK+M P+ +Y T+I G+
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 122/226 (53%), Gaps = 8/226 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y N K A F H + + +G +Y SLL VL + N +K A++ F +I
Sbjct: 402 LINGYCRCANAKKA-FLLHD-EMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS 459
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELE 243
E V+P DV + +I G+C ++ A ++ D M V P+ + +NT++ G C++G++E
Sbjct: 460 EGVLP-DVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVE 518
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA++ +EM RG +P+ +++N +I G G + +A + +M GF V T+ +++
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV 578
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+GLC + D A L+ ++ M PD +Y +I G K+ DE
Sbjct: 579 QGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 4/271 (1%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ +I+ C M + A + F M K P + N++++ F K E A EM
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+ + T+N MI LC G++ +AK + M +G K N+ T+ +++ G C G+ +
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A L + + PD +Y +I+G CK G+ +EA + +EM +GL+P+ +N +
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
G LD A +M + P +YN++I L M + R + E ++ + G
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQ-RTDEAECMIKEIQEKGI 392
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ D Y+ L+ GYC N + + EM+
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEML 423
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 119/243 (48%), Gaps = 7/243 (2%)
Query: 208 GMIENAKKVFDVMTVKPNLLAYNT------MINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
G + +++F+ + + L + + +I C +EA +C M +G P
Sbjct: 127 GTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTI 186
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
T N+++ R + A +L A+M K +V T M+ LC GK +A ++ +
Sbjct: 187 ETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGH 246
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ + + P++ +Y +++G+C G+ + A ++L M+ + ++P F++ ++ + + G
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
L+ A + ++M Q P+ V YNT+I G C KG + D M++ G + + Y+
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFC-NKGNLDMASAYKDEMLKKGISPTMSTYN 365
Query: 442 CLL 444
L+
Sbjct: 366 SLI 368
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 8/198 (4%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWF 146
T YT++ VL + + A L K + L D + + LI + NVK A
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELL 489
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+++ ++N+++ R ++ A E F ++ K + PD ++ T+I GY +
Sbjct: 490 KDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEM-KRRGIKPDHISFNTLISGYSR 548
Query: 207 MGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G I++A +V + M P +L YN ++ G CK E + A++ + EM+++G P++ T
Sbjct: 549 RGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTT 608
Query: 264 YNAMIYGLCINGRVDEAK 281
Y +I G+ DE K
Sbjct: 609 YFTLIEGIAKVNIPDENK 626
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 182/349 (52%), Gaps = 40/349 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S+N ++ L RV ++ A E F + N V D TY+T++ G C G I+ A + D
Sbjct: 177 SFNLVIKALCRVGNVDQAVEVFRGMSDRNCVA-DGYTYSTLMHGLCNEGRIDEAVSLLDE 235
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V+ PN +A+N +I+ CKKG+L A K ++ M +GC PNE+TYN++++GLC+ G+
Sbjct: 236 MQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGK 295
Query: 277 VDEAKMLMAKMRLN-----------------------------------GFKDNVSTHKS 301
+D+A L+ +M N G++ N ++ S
Sbjct: 296 LDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSS 355
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GL GK + + + ++E P+ Y +I+G C+ GK DEA L EM+ +G
Sbjct: 356 LISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKG 415
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P F+++++ E G++ +AIL+ K+M DC + V Y+ +I GLC G++++
Sbjct: 416 HTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLC-KNGKLKEA 474
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ +M+ G LD YS ++ G+C VE M++ ++M+ +L
Sbjct: 475 LIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKL 523
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 184/427 (43%), Gaps = 62/427 (14%)
Query: 53 LGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAA 112
L N+V K + N A+ F S+ N + Y Y+ + L + I A
Sbjct: 176 LSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGY-----TYSTLMHGLCNEGRIDEAV 230
Query: 113 SLLKNSNKLSDF----FISKLIKAYGDRGNVKAAIFWFHQAKQIEN---GACL---YSYN 162
SLL F + LI A +G++ A +K ++N C+ +YN
Sbjct: 231 SLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRA------SKLVDNMFLKGCVPNEVTYN 284
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV 222
SL+ L + A +++V VP D+ T+ T++ G+ K G + +V +
Sbjct: 285 SLVHGLCLKGKLDKAMSLLNRMVANKCVPNDI-TFGTLVDGFVKHGRALDGVRVLVSLEE 343
Query: 223 KP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
K N +Y+++I+G K+G+ E + EM+ +GC+PN + Y+A+I GLC G+ DE
Sbjct: 344 KGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDE 403
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
AK + +M+ G N T+ S++ G G +A+ + + + + N Y ++IN
Sbjct: 404 AKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILIN 463
Query: 340 GFCKIGKSDEAISLLKEMRARGLK------------------------------------ 363
G CK GK EA+ + K+M +RG+K
Sbjct: 464 GLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKL 523
Query: 364 -PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P V ++N + + RAI +L M C P+F++ + + L QD
Sbjct: 524 QPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGR 583
Query: 423 DLVDRMI 429
+ +D ++
Sbjct: 584 EFLDELV 590
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 191/371 (51%), Gaps = 13/371 (3%)
Query: 102 LLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSY 161
L+ HSL + NS L+ AY + + F +A + S
Sbjct: 144 LIFHSLSVCSGQFCANS-----IIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSC 198
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N LL LV+ N E + ++++ + P++ T+ T+I G CK+G + A V D M
Sbjct: 199 NPLLSALVKENEFGGVEFVYKEMIRRKI-SPNLITFNTVINGLCKVGKLNKAGDVVDDMK 257
Query: 222 V---KPNLLAYNTMINGFCKK---GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
V PN++ YNT+I+G+CK G++ +A + EM+ PN +T+N +I G C +
Sbjct: 258 VWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDE 317
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ A + +M+ G K V T+ S++ GLC GK ++A L ++ +N+ P+V +Y
Sbjct: 318 NLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYN 377
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+ING+CK +EA L + +GL P V +FN + + G+++ A LL K M +
Sbjct: 378 ALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEK 437
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
LPN +YN +I G C +G+M++V++L++ M G D Y+ L+ +CE+ +
Sbjct: 438 GFLPNASTYNCLIVGFC-REGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKK 496
Query: 456 VMQIAHEMVTK 466
++ EM+ K
Sbjct: 497 AARLIDEMLDK 507
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 187/347 (53%), Gaps = 18/347 (5%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLG---VLVRVNSIKLAEEFFH 182
+ KL KA ++K FW + + +YN+L+ + RV + A+
Sbjct: 243 VGKLNKAGDVVDDMKVWGFWPN----------VVTYNTLIDGYCKMGRVGKMYKADAILK 292
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
++V EN V P+ T+ +I G+CK + A KVF+ M +KP ++ YN+++NG C +
Sbjct: 293 EMV-ENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNE 351
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G+L EAK ++EM++ +PN +TYNA+I G C ++EA+ L + G NV T
Sbjct: 352 GKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITF 411
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++L G C GK ++A + ++E P+ +Y +I GFC+ GK +E +LL EM+
Sbjct: 412 NTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQC 471
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RG+K ++N + E E +A L+ +M P+ ++YN ++ G CM +G ++
Sbjct: 472 RGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCM-EGNLR 530
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L +M + G + Y+ L++GYC +G +E+ + +EM+ K
Sbjct: 531 AALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEK 577
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 159/295 (53%), Gaps = 5/295 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ + ++ A + F ++ + + P V TY +++ G C G + AK + D
Sbjct: 305 TFNVLIDGFCKDENLSAALKVFEEMQSQGL-KPTVVTYNSLVNGLCNEGKLNEAKVLLDE 363
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KPN++ YN +ING+CKK LEEA++ + + +G PN +T+N +++G C G+
Sbjct: 364 MLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGK 423
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EA +L M GF N ST+ ++ G C GK ++ L + + D +Y +
Sbjct: 424 MEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNI 483
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ +C+ + +A L+ EM +GLKP+ ++N + G L A+ L KQM +
Sbjct: 484 LISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEG 543
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
N V+YN +I G C KG+++D L++ M+ G + T Y + + E+G
Sbjct: 544 RWANVVTYNVLIQGYC-RKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 174/343 (50%), Gaps = 5/343 (1%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
PN Y+ Y + V + +I +++N + + LI + N+ AA
Sbjct: 263 PNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAA 322
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + + + +YNSL+ L + A+ +++ N+ P+V TY +I
Sbjct: 323 LKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNL-KPNVITYNALIN 381
Query: 203 GYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
GYCK ++E A+++FD + + PN++ +NT+++G+CK G++EEA M+ +G P
Sbjct: 382 GYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLP 441
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N TYN +I G C G+++E K L+ +M+ G K + T+ ++ C + +A +
Sbjct: 442 NASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLI 501
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+++ + P +Y +++NG+C G A++L K+M G V ++N + +
Sbjct: 502 DEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRK 561
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
G+L+ A LL +M + +PN +Y II M KG + D+E
Sbjct: 562 GKLEDANGLLNEMLEKGLIPNRTTYE-IIKEEMMEKGFLPDIE 603
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAK 246
V D TY +I +C+ + A ++ D M +KP+ L YN ++NG+C +G L A
Sbjct: 474 VKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAAL 533
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+M G N +TYN +I G C G++++A L+ +M G N +T++ + + +
Sbjct: 534 NLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEM 593
Query: 307 CVVGKFDQAVGYL 319
G G+L
Sbjct: 594 MEKGFLPDIEGHL 606
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 211/415 (50%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y + L +H L+S A SL++
Sbjct: 3 FFTWLSSPANST--FRHTLHSYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
N+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 61 VLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++
Sbjct: 121 KYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D A L +M
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLKP F++ + + G+LD A K+M Q + + V+Y +I
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLCQ-EGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEM 413
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 167/309 (54%), Gaps = 5/309 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+SYNSLL L + + A F +V E V PDV +Y+ +I G+CK+ + A+K++
Sbjct: 122 FSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYK 181
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M PN+ YN +NG +KG + +A+ EM++ GC P+ +TY+ +I+G +
Sbjct: 182 QMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLAR 241
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ D+A L M G + N T+ +L GLC K D+A R ++E +PD +Y
Sbjct: 242 KHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYT 301
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++ GFC +GK ++A+ + EM ++G P V ++N + + G+ A L + M
Sbjct: 302 TLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR 361
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS-GHNLDFTMYSCLLKGYCEEGNVE 454
+C P+ VS+N +I GL AK R+ D ++ +RM + G + D Y+ L+ G C E +
Sbjct: 362 ECKPDTVSHNIMIDGLSKAK-RLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLS 420
Query: 455 NVMQIAHEM 463
M++ E+
Sbjct: 421 EAMKVFKEI 429
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 157/312 (50%), Gaps = 8/312 (2%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
+S++ L + + A ++K P D++T++ +I CK I+ A++ M
Sbjct: 53 HSVIQELCKAGRVDSALSLLETMIKRGYCP-DMATHSMLINELCKADKIQEAQEFLQGMN 111
Query: 221 ----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN-RGCRPNELTYNAMIYGLCING 275
T + +YN+++N CK ++ +A + M++ R P+ ++Y+ +I G C
Sbjct: 112 RTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKID 171
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ A+ L +M NV+T+ + L GL G+ A G ++ A +PDV +Y
Sbjct: 172 ELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYS 231
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+GF K D+A L + M +RG +P ++N + L + + D A L ++M +
Sbjct: 232 TLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 291
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C P+ V+Y T++ G C G+++ ++ D M+ GH+ D Y+CLLKG+ G
Sbjct: 292 GCDPDKVTYTTLLYGFCNV-GKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 350
Query: 456 VMQIAHEMVTKK 467
Q+ MV+++
Sbjct: 351 ARQLFQVMVSRE 362
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 126/251 (50%), Gaps = 7/251 (2%)
Query: 225 NLLAYNTMINGFCKKGELE---EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
N +A+ + G CK G++E EA + M E ++ P+ T +++I LC GRVD A
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR--NVMEANMNPDVKSYEVVIN 339
L+ M G+ +++TH ++ LC K +A +L+ N + SY ++N
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129
Query: 340 GFCKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
CK K +A ++ M R + P V S++ + + EL RA L KQM ++C+
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
PN +YN + GL M KGR+ D + + + MI +G + D YS L+ G+ + +
Sbjct: 190 PNVTTYNAFLNGL-MRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248
Query: 459 IAHEMVTKKGR 469
+ M+++ R
Sbjct: 249 LFEAMISRGCR 259
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 40/260 (15%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+ L L+R I A+ + +++ PDV TY+T+I G+ + A ++F+
Sbjct: 194 TYNAFLNGLMRKGRIADAQGVYEEMISAGC-SPDVITYSTLIHGFSLARKHDQAHELFEA 252
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +PN + YN +++G CK+ + +EA + +M+ RGC P+++TY ++YG C G+
Sbjct: 253 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGK 312
Query: 277 VDEAKMLMAKM--------------RLNGF---------------------KDNVSTHKS 301
+++A + +M L GF K + +H
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNI 372
Query: 302 MLKGLCVVGKFDQAVG-YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
M+ GL + D AV + R + +PD+ +Y +I G C + EA+ + KE+
Sbjct: 373 MIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRL 432
Query: 361 GLKPTVFSFNAVFRILVENG 380
L P +FN + + G
Sbjct: 433 KLSPDPHAFNVLLEAMYAAG 452
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+ + + G ++ A+ F + + + +YN LL R A + F Q++
Sbjct: 301 TTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLF-QVMV 359
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGEL 242
PD ++ MI G K +++A +VF+ M P+L+ YN++I G C + L
Sbjct: 360 SRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRL 419
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
EA K E+ P+ +N ++ + G
Sbjct: 420 SEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 211/426 (49%), Gaps = 35/426 (8%)
Query: 68 PYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL------KNSNKL 121
P L FFN ++ P + HT Y + L H ++ A SL+ K +N
Sbjct: 99 PSSLLSFFNHLASRPP----FRHTLHSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSA 154
Query: 122 SDFFIS--------------------KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSY 161
S F S LI AY D G A+ F + + +
Sbjct: 155 STLFSSILRTMPRHHHHHHSVGLVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGC 214
Query: 162 NSLLGVLVRVNSIKLAEEF-FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+LL +VR+ +++ + + V ++ PP + + ++ G+CK G + NA+ VFD +
Sbjct: 215 ENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEI 274
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
++P ++++NT+I+G CK G++EE + M + G P+ T++A+I GLC GR+
Sbjct: 275 PKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRL 334
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DE +L +M G N T +++ G C GK D A+ + ++ + PD+ +Y +
Sbjct: 335 DEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNAL 394
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
ING CK+G EA L+ EM A GLKP +F + ++G+++ A+ + ++M +
Sbjct: 395 INGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGI 454
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ V++ +I GLC +GR+ D ++ M+ +G D Y+ ++ +C++G+V+
Sbjct: 455 ELDDVAFTALISGLC-REGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGF 513
Query: 458 QIAHEM 463
++ EM
Sbjct: 514 KLLKEM 519
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 179/338 (52%), Gaps = 9/338 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH- 182
+F + L+ + G+V A F + + + S+N+L+ + + EE F
Sbjct: 249 YFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDV---EEGFRL 305
Query: 183 -QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
+++ V PDV T++ +I G CK G ++ +FD M + PN + + T+I+G CK
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G+++ A K M+ +G RP+ +TYNA+I GLC G + EA+ L+ +M +G K + T
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKIT 425
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+++ G C G + A+ R ++E + D ++ +I+G C+ G+ +A +L +M
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+ G KP ++ V + G++ LLK+M +P V+YN ++ GLC +G+M
Sbjct: 486 SAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLC-KQGQM 544
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
++ + L+D M+ G + Y+ LL G+ + G+ +V
Sbjct: 545 KNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDV 582
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 177/312 (56%), Gaps = 12/312 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+LL L + N ++ + ++V E PD +Y T++ C+ G E A K+ +
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMV-EAGREPDTFSYNTVVACLCESGKYEEAGKILEK 257
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ YN++++GFCK +++EA++ + +M+ R C P +TY +I G R
Sbjct: 258 MIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADR 317
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ +A +M M G ++ T+ +L GLC GK ++A L ++E + PDV +Y +
Sbjct: 318 LADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSI 377
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++NG CK+GK D+A LL+ M RG +P + +FN + + G++D +L+ M ++
Sbjct: 378 LVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVS 437
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C P+ V+Y+T+I G C A RMQD ++ G + D YS +L+G C G VE
Sbjct: 438 CTPDVVTYSTLIDGYCKAN-RMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEA 490
Query: 457 MQIAHEMVTKKG 468
++ +++TK+G
Sbjct: 491 QEV-MDLMTKQG 501
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 171/312 (54%), Gaps = 11/312 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN LL L + ++ A E +V+++ P DV TY+ ++ G CK+G +++A+ +
Sbjct: 337 LVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAP-DVVTYSILVNGLCKLGKVDDARLLL 395
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
++M +PNL+ +NTMI+GFCK G+++E K + M C P+ +TY+ +I G C
Sbjct: 396 EMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKA 455
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+ +A ++ G + +++ SML+GLC GK ++A + + + P Y
Sbjct: 456 NRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHY 509
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I G C + + DEA+ +L+ M RG +P +++++ + L + ++ AI +L M +
Sbjct: 510 ALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLE 569
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C+P+ +Y ++I G C +M M SG D Y+ L+ G+C+ GNVE
Sbjct: 570 KGCVPDVATYTSLIDGFCKIN-KMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVE 628
Query: 455 NVMQIAHEMVTK 466
+++ M+ K
Sbjct: 629 KAIEVMQLMLEK 640
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 167/298 (56%), Gaps = 5/298 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN L+ L ++ I A +++ + VP DV TYT++I G C+ ++ A+K+ + M
Sbjct: 130 YNCLIAGLCKMGKIDAARNVLKMMLERSCVP-DVITYTSLIVGCCQTNALDEARKLMEKM 188
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+ +AYN ++NG CK+ +LEE K + EM+ G P+ +YN ++ LC +G+
Sbjct: 189 KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKY 248
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA ++ KM +V T+ S++ G C V K D+A L +++ P V +Y +
Sbjct: 249 EEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTL 308
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I GF + + +A ++++M G+ P + ++N + L + G+L+ A LL+ M + DC
Sbjct: 309 IGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDC 368
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ V+Y+ ++ GLC G++ D L++ M+ G + ++ ++ G+C+ G V+
Sbjct: 369 APDVVTYSILVNGLCKL-GKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDE 425
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 167/342 (48%), Gaps = 36/342 (10%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-D 218
+Y +L+ R + K+ E ++++ PDV T+ T+++ YC++G ++ A F
Sbjct: 26 TYGALITGFSRAGNSKMVLEIANEMLARRF-SPDVITHNTILKAYCQIGDLDRALSHFRG 84
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
M P Y +I+G C+ ++EA + ++EM+ + C P+ YN +I GLC G++D
Sbjct: 85 KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKID 144
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
A+ ++ M +V T+ S++ G C D+A + + E+ + PD +Y ++
Sbjct: 145 AARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALL 204
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG CK + +E LL+EM G +P FS+N V L E+G+ + A +L++M + C
Sbjct: 205 NGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCG 264
Query: 399 PNFVSYNTIICGLCMAK----------------------------------GRMQDVEDL 424
P+ V+YN+++ G C R+ D +
Sbjct: 265 PDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRV 324
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ M ++G + D Y+CLL G C+ G +E ++ MV K
Sbjct: 325 MEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEK 366
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 140/251 (55%), Gaps = 4/251 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++N+++ + + + +++KE PDV TY+T+I GYCK +++A F
Sbjct: 407 LVTFNTMIDGFCKAGKVDEGHKVL-ELMKEVSCTPDVVTYSTLIDGYCKANRMQDA---F 462
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
++ + P+ +Y++M+ G C G++EEA++ M+ M +GC P Y +I GLC R
Sbjct: 463 AILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERG 522
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DEA ++ M G + N+ T+ ++ GLC + + A+ L ++E PDV +Y +
Sbjct: 523 DEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSL 582
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+GFCKI K D A K MR G +P ++N + ++G +++AI +++ M + C
Sbjct: 583 IDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGC 642
Query: 398 LPNFVSYNTII 408
P+ +Y +++
Sbjct: 643 NPDAATYFSLM 653
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 132/278 (47%), Gaps = 34/278 (12%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-------------------------- 256
KP+ Y +I GF + G + + NEM+ R
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80
Query: 257 -------CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
C P TY +I+GLC R+DEA L+ +M + + + ++ GLC +
Sbjct: 81 HFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKM 140
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
GK D A L+ ++E + PDV +Y +I G C+ DEA L+++M+ GL P ++
Sbjct: 141 GKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAY 200
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
NA+ L + +L+ LL++M + P+ SYNT++ LC + G+ ++ ++++MI
Sbjct: 201 NALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES-GKYEEAGKILEKMI 259
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D Y+ L+ G+C+ ++ ++ +MV ++
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 10/215 (4%)
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMA---KMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+P+ TY A+I G R +KM++ +M F +V TH ++LK C +G D+
Sbjct: 21 KPSNSTYGALITGF---SRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDR 77
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+ + R M +P +Y ++I+G C+ + DEA LL EM + P +N +
Sbjct: 78 ALSHFRGKMWC--SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIA 135
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L + G++D A +LK M + C+P+ ++Y ++I G C + + L+++M SG
Sbjct: 136 GLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNA-LDEARKLMEKMKESGLT 194
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
D Y+ LL G C++ +E V ++ EMV + GR
Sbjct: 195 PDTVAYNALLNGLCKQNQLEEVSKLLEEMV-EAGR 228
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ + R P +Y +I GF + G S + + EM AR P V + N +
Sbjct: 7 EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+ + G+LDRA+ + +M C P +Y +I GLC + R+ + L+D MI+
Sbjct: 67 KAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQ-RIDEAYQLLDEMIQKDC 123
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ D +Y+CL+ G C+ G ++ + M+ +
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLER 156
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 188/364 (51%), Gaps = 40/364 (10%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
+AA + + ++ + +Y++N ++ VL + +K A++F + + + V P++ TY
Sbjct: 202 TEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM-ETSGVKPNIVTYN 260
Query: 199 TMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
T++ GYC G +E A + M ++P+ Y ++I+G CK+G LEEA K EM+ +
Sbjct: 261 TIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK 320
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G RP+ + YN +I G C G +D A +M G +ST+ S++ L + + D+A
Sbjct: 321 GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEA 380
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA---- 371
++ + E ++PD +Y ++ING+C+ + +A L EM A G+KPT ++ +
Sbjct: 381 ECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHV 440
Query: 372 ------------VFRILVENGELDRAIL-------------------LLKQMPQMDCLPN 400
+F+ + G L AI+ LLK M +M P+
Sbjct: 441 LSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPD 500
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V++NTI+ G C +G++++ +L D M R G D ++ L+ GY G++++ ++
Sbjct: 501 EVTFNTIMQGHC-REGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559
Query: 461 HEMV 464
+EM+
Sbjct: 560 NEML 563
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 162/359 (45%), Gaps = 46/359 (12%)
Query: 129 LIKAYGDRGNVKAA--IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
++ Y G V+AA I + ++IE + ++Y SL+ + + ++ A + F ++V+
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDS--FTYGSLISGMCKQGRLEEASKIFEEMVQ 319
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM-------------------------- 220
+ + P V Y T+I G+C G ++ A D M
Sbjct: 320 KGLRPSAV-IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD 378
Query: 221 ------------TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
+ P+ + YN +ING+C+ ++A +EM+ G +P + TY +++
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
+ L R+ EA L K+ G + +++ G C A L+++ +
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PD ++ ++ G C+ GK +EA L EM+ RG+KP SFN + G++ A +
Sbjct: 499 PDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV-EDLVDRMIRSGHNLDFTMYSCLLKG 446
+M P ++YN ++ GLC K + D+ E+L+ M+ G D T Y L++G
Sbjct: 559 RNEMLDTGFNPTVLTYNALVQGLC--KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEG 615
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 12/290 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + ++GN+ A + + + + +YNSL+ L AE +I +E
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI-QEK 390
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVM---TVKPNLLAYNTMINGFCKKGEL 242
+ PD TY +I GYC+ NAKK F D M +KP Y ++++ KK +
Sbjct: 391 GISPDAITYNILINGYCRCA---NAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKS 301
+EA ++ + G P+ + +NA+I G C N V A L+ M R+ D V T +
Sbjct: 448 KEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEV-TFNT 506
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+++G C GK ++A + + PD S+ +I+G+ + G +A + EM G
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
PTV ++NA+ + L +N E D A LLK+M P+ +Y T+I G+
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 121/226 (53%), Gaps = 8/226 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y N K A F H + + +G +Y SLL VL + N +K A++ F +I
Sbjct: 402 LINGYCRCANAKKA-FLLHD-EMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS 459
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELE 243
E V+P D + +I G+C ++ A ++ D M V P+ + +NT++ G C++G++E
Sbjct: 460 EGVLP-DAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVE 518
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA++ +EM RG +P+ +++N +I G G + +A + +M GF V T+ +++
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV 578
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+GLC + D A L+ ++ M PD +Y +I G K+ DE
Sbjct: 579 QGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 4/271 (1%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ +I+ C M + A + F M K P + N++++ F K E A EM
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+ + T+N MI LC G++ +AK + M +G K N+ T+ +++ G C G+ +
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A L + + PD +Y +I+G CK G+ +EA + +EM +GL+P+ +N +
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
G LD A +M + P +YN++I L M + R + E ++ + G
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQ-RTDEAECMIKEIQEKGI 392
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ D Y+ L+ GYC N + + EM+
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEML 423
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 122/251 (48%), Gaps = 7/251 (2%)
Query: 200 MIRGYCKMGMIENAKKVFDVMTVKPNLLAYNT------MINGFCKKGELEEAKKCMNEMM 253
++R G + +++F+ + + L + + +I C +EA +C M
Sbjct: 119 LLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMK 178
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+G P T N+++ R + A +L A+M K +V T M+ LC GK
Sbjct: 179 EKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLK 238
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A ++ ++ + + P++ +Y +++G+C G+ + A ++L M+ + ++P F++ ++
Sbjct: 239 KAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLI 298
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+ + G L+ A + ++M Q P+ V YNT+I G C KG + D M++ G
Sbjct: 299 SGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFC-NKGNLDMASAYKDEMLKKGI 357
Query: 434 NLDFTMYSCLL 444
+ + Y+ L+
Sbjct: 358 SPTMSTYNSLI 368
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLK---NSNKLSD-FFISKLIKAYGDRGNVKAAIFWF 146
T YT++ VL + + A L K + L D + LI + NVK A
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELL 489
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+++ ++N+++ R ++ A E F ++ K + PD ++ T+I GY +
Sbjct: 490 KDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEM-KRRGIKPDHISFNTLISGYSR 548
Query: 207 MGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G I++A +V + M P +L YN ++ G CK E + A++ + EM+++G P++ T
Sbjct: 549 RGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTT 608
Query: 264 YNAMIYGLCINGRVDEAK 281
Y +I G+ DE K
Sbjct: 609 YFTLIEGIAKVNIPDENK 626
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 174/309 (56%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ + ++ + + F ++ ++ +VP D TYT+MI G C+ G + A+K+F M
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKRKKIVP-DFVTYTSMIHGLCQAGKVVEARKLFSEM 418
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+KP+ + Y +I+G+CK GE++EA N+M+ +G PN +TY A++ GLC G V
Sbjct: 419 LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEV 478
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A L+ +M G + NV T+ +++ GLC VG +QAV + + A PD +Y +
Sbjct: 479 DIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTI 538
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++ +CK+G+ +A LL+ M +GL+PT+ +FN + +G L+ L+K M
Sbjct: 539 MDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGI 598
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+PN ++N+++ C+ + M+ ++ M G D Y+ L+KG+C+ N++
Sbjct: 599 MPNATTFNSLMKQYCI-RNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAW 657
Query: 458 QIAHEMVTK 466
+ EMV K
Sbjct: 658 FLHKEMVEK 666
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 160/296 (54%), Gaps = 9/296 (3%)
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYN 230
+KL EE + +K P+ TY ++I CK G + A++V VM + P+ + Y
Sbjct: 307 LKLMEELQRKGLK-----PNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYT 361
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
T+I+GF K G + K +EM + P+ +TY +MI+GLC G+V EA+ L ++M
Sbjct: 362 TLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSK 421
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G K + T+ +++ G C G+ +A ++E + P+V +Y +++G CK G+ D A
Sbjct: 422 GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIA 481
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
LL EM +GL+P V ++NA+ L + G +++A+ L+++M P+ ++Y TI+
Sbjct: 482 NELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDA 541
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
C G M +L+ M+ G ++ L+ G+C G +E+ ++ M+ K
Sbjct: 542 YC-KMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDK 596
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 159/323 (49%), Gaps = 9/323 (2%)
Query: 112 ASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLV 169
+ +L K + + LI Y G +K A F H + +E G + +Y +L+ L
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEA-FSLHN-QMVEKGLTPNVVTYTALVDGLC 473
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNL 226
+ + +A E H++ E + P+V TY +I G CK+G IE A K+ + M + P+
Sbjct: 474 KCGEVDIANELLHEM-SEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDT 532
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
+ Y T+++ +CK GE+ +A + + M+++G +P +T+N ++ G C++G +++ + L+
Sbjct: 533 ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKW 592
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M G N +T S++K C+ + + + + PD +Y ++I G CK
Sbjct: 593 MLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARN 652
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
EA L KEM +G T S+N++ + + + + A L ++M + Y+
Sbjct: 653 MKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYD- 711
Query: 407 IICGLCMAKGRMQDVEDLVDRMI 429
I + +G ++ +L D I
Sbjct: 712 IFVDVNYEEGNWENTLELCDEAI 734
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 180/423 (42%), Gaps = 47/423 (11%)
Query: 85 PNKYHHTTPCYTAITDVLLSHSLISIAASLL---KNSNKLSDFFI-SKLIKAYGDRGNVK 140
PN+Y Y +I L + A +L KN D + + LI +G GNV
Sbjct: 320 PNQY-----TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVS 374
Query: 141 AAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP--------- 191
F + K+ + +Y S++ L + + A + F +++ + + P
Sbjct: 375 VEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALI 434
Query: 192 -------------------------PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
P+V TYT ++ G CK G ++ A ++ M+ K
Sbjct: 435 DGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQ 494
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN+ YN +ING CK G +E+A K M EM G P+ +TY ++ C G + +A L
Sbjct: 495 PNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHEL 554
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ M G + + T ++ G C+ G + ++ +++ + P+ ++ ++ +C
Sbjct: 555 LRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCI 614
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
I + K M A+G+ P ++N + + + + A L K+M + S
Sbjct: 615 RNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAAS 674
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YN++I G K + ++ L + M G + +Y + EEGN EN +++ E
Sbjct: 675 YNSLIKGFYKRK-KFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEA 733
Query: 464 VTK 466
+ K
Sbjct: 734 IEK 736
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 182/403 (45%), Gaps = 30/403 (7%)
Query: 72 LFFFNWAS-NPNPNPNKYHHTTPCYTAITDVLLSHSLIS--IAASLLKNSNKLSDFFISK 128
L FF+WA +P+ A D+ ++H L+ L N D F +
Sbjct: 111 LDFFDWARLRRDPSLESLCIVVQIAVASKDLRMAHRLVFEFWEKPHLDVGNSF-DRFTER 169
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYS---YNSLL--GVLVRVNSIKLAEEFFHQ 183
LI Y D G F Q +E G L + ++ LL GVLV V+S L F +
Sbjct: 170 LIYTYKDWGAHPLVFDVFFQV-LVEAGLLLEAGKLFDKLLNYGVLVSVDSCNL---FLAR 225
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELE 243
+ + T + R Y ++G+ N ++YN +++ C+ G+++
Sbjct: 226 LSNSF---DGIRTAFRVFREYSEVGVCWNT-------------VSYNIILHLLCQLGKVK 269
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +M RG P+ ++Y+ ++ G C ++ + LM +++ G K N T+ S++
Sbjct: 270 EAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSII 329
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC G+ +A LR + + PD Y +I+GF K G L EM+ + +
Sbjct: 330 SFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIV 389
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P ++ ++ L + G++ A L +M P+ V+Y +I G C A G M++
Sbjct: 390 PDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKA-GEMKEAFS 448
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L ++M+ G + Y+ L+ G C+ G V+ ++ HEM K
Sbjct: 449 LHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK 491
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 35/241 (14%)
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
L ++ + G L EA K ++++N YG+ ++ VD + +A+
Sbjct: 182 LVFDVFFQVLVEAGLLLEAGKLFDKLLN--------------YGVLVS--VDSCNLFLAR 225
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
+ N F D + T A R E + + SY ++++ C++GK
Sbjct: 226 LS-NSF-DGIRT----------------AFRVFREYSEVGVCWNTVSYNIILHLLCQLGK 267
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
EA SLL +M RG P V S++ + + +L + + L++++ + PN +YN+
Sbjct: 268 VKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNS 327
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
II LC GR+ + E ++ M D +Y+ L+ G+ + GNV ++ EM K
Sbjct: 328 IISFLCKT-GRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRK 386
Query: 467 K 467
K
Sbjct: 387 K 387
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 205/421 (48%), Gaps = 30/421 (7%)
Query: 67 NPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL------KNSNK 120
+P L FF W S + + + Y +T L +H ++S A SLL K N
Sbjct: 82 SPPSLLSFFKWLSTQH----HFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNS 137
Query: 121 LSDFF---------------ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
S F S L+ AY D G AI F ++ +S L
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLF 197
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---V 222
L+++N A F+ +I+ + PPDV + ++ CK I A+ +F + +
Sbjct: 198 DRLMKLNLTSPAWAFYEEIL-DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGL 256
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P ++++NT+ING+CK G L++ + MM P+ TY+ +I GLC G++D+A
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANK 316
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M G N T +++ G CV G+ D + + ++ + PDV +Y +ING C
Sbjct: 317 LFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLC 376
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K+G EA L+ EM RGLKP F++ + + G+L+ A+ + K+M + + V
Sbjct: 377 KVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV 436
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++ +I G C +G++ + E + M+ +G D Y+ ++ G+C++G+V+ ++ E
Sbjct: 437 AFTALISGFC-REGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495
Query: 463 M 463
M
Sbjct: 496 M 496
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 147/255 (57%), Gaps = 6/255 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y+ L+ L + + A + F ++ +VP DV T+TT+I G+C G + +++
Sbjct: 295 VFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV-TFTTLINGHCVTGRADLGMEIY 353
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M VKP+++ YNT+ING CK G+L EAKK + EM RG +P++ TY +I G C
Sbjct: 354 QQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKE 413
Query: 275 GRVDEAKMLMAKMRLNGFK-DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G ++ A + +M G + DNV+ +++ G C G+ +A LR ++EA + PD +
Sbjct: 414 GDLESALEIRKEMVKEGIELDNVA-FTALISGFCREGQVIEAERTLREMLEAGIKPDDAT 472
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +VI+GFCK G LLKEM+ G P V ++N + L + G++ A +LL M
Sbjct: 473 YTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAML 532
Query: 394 QMDCLPNFVSYNTII 408
+ +P+ ++YN ++
Sbjct: 533 NLGVVPDDITYNILL 547
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 2/178 (1%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G+ +V ++ LC K ++A + + + P V S+ +ING+CK G D+
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
L + M + P VF+++ + L + G+LD A L +M +PN V++ T+I G
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
C+ GR ++ +M+R G D Y+ L+ G C+ G++ ++ EM T++G
Sbjct: 340 HCVT-GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM-TQRG 395
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 176/345 (51%), Gaps = 40/345 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+YN L+ L K A + + P+ TY T++ +C+ G ++ A+++
Sbjct: 157 VYTYNILVRALCGRGHRKEALSVLRDM-RGAGCDPNAVTYNTLVAAFCRAGEVDRAERLV 215
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D+M +KPNL+ +N+++NG CK G +E+A+K +EM+ G P+ ++YN ++ G C
Sbjct: 216 DMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKV 275
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM------- 327
G EA + A+M G +V T S++ +C G ++AVG +R + E +
Sbjct: 276 GCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITF 335
Query: 328 ----------------------------NPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
P V Y +ING+C +G+ DEA L++EM A
Sbjct: 336 TALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEA 395
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G+KP V +++ + +NG+ A L +QM + LP+ ++Y+++I LC K R+
Sbjct: 396 KGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEK-RLG 454
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D L MI G D Y+ L+ G+C+EGNVE + + EMV
Sbjct: 455 DAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMV 499
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 166/308 (53%), Gaps = 6/308 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L L S+ A FF ++ + V P +V TY ++R C G + A V
Sbjct: 125 AYNAVLLALSDA-SLPSARRFFDSMLSDGVAP-NVYTYNILVRALCGRGHRKEALSVLRD 182
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M PN + YNT++ FC+ GE++ A++ ++ M G +PN +T+N+++ G+C GR
Sbjct: 183 MRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGR 242
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+++A+ + +M G + ++ +++ G C VG +A+ + + PDV ++
Sbjct: 243 MEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTS 302
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ CK G + A+ L++EMR RGL+ +F A+ + G LD A+L +++M Q
Sbjct: 303 LIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCR 362
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V YN +I G CM GRM + +LV M G D YS +L YC+ G+ +
Sbjct: 363 IQPSVVCYNALINGYCMV-GRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSA 421
Query: 457 MQIAHEMV 464
Q+ +M+
Sbjct: 422 FQLNQQML 429
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 168/305 (55%), Gaps = 5/305 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++NS++ + + ++ A + F ++VKE + P VS Y T++ GYCK+G A VF
Sbjct: 227 LVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVS-YNTLVGGYCKVGCSHEALSVF 285
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
MT K P+++ + ++I+ CK G LE A + EM RG + NE+T+ A+I G C
Sbjct: 286 AEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKK 345
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D+A + + +MR + +V + +++ G C+VG+ D+A +R + + PDV +Y
Sbjct: 346 GFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTY 405
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++ +CK G + A L ++M G+ P +++++ R+L E L A +L K M
Sbjct: 406 STILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMIS 465
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ P+ V+Y ++I G C +G ++ L D M+++G D YS L+ G + +
Sbjct: 466 LGLQPDEVTYTSLIDGHC-KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTK 524
Query: 455 NVMQI 459
++
Sbjct: 525 EAQRL 529
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 199/454 (43%), Gaps = 96/454 (21%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLKNSNKLSD------FFISKLIKAYGDRGNVKAAIFW 145
P A VLL+ S S+ ++ + LSD + + L++A RG+ K A+
Sbjct: 120 APSVLAYNAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+ +YN+L+ R + AE +++E + P++ T+ +++ G C
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLV-DMMREGGLKPNLVTFNSVVNGIC 238
Query: 206 KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
K G +E+A+KVFD M + P+ ++YNT++ G+CK G EA EM +G P+ +
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVV 298
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
T+ ++I+ +C G ++ A L+ +MR G + N T +++ G C G D A+ +R +
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV---------------- 366
+ + P V Y +ING+C +G+ DEA L++EM A+G+KP V
Sbjct: 359 RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDT 418
Query: 367 -------------------FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
+++++ R+L E L A +L K M + P+ V+Y ++
Sbjct: 419 HSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSL 478
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS-------------------------- 441
I G C +G ++ L D M+++G D YS
Sbjct: 479 IDGHC-KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEE 537
Query: 442 ------------------------CLLKGYCEEG 451
LLKG+C +G
Sbjct: 538 PVPANIKYDALMRCCRNAELKSVLALLKGFCMKG 571
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 167/323 (51%), Gaps = 20/323 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ SL+ V+ + +++ A ++ +E + + T+T +I G+CK G +++A
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREM-RERGLQMNEITFTALIDGFCKKGFLDDALLAVRE 357
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++P+++ YN +ING+C G ++EA++ + EM +G +P+ +TY+ ++ C NG
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGD 417
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
A L +M NG + T+ S+++ LC + A +N++ + PD +Y
Sbjct: 418 THSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTS 477
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G CK G + A+SL EM G+ P V +++ + L ++ A LL ++ +
Sbjct: 478 LIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEE 537
Query: 397 CLPNFVSYNTII-C--------------GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+P + Y+ ++ C G CM KG M + + + ++ NLD ++YS
Sbjct: 538 PVPANIKYDALMRCCRNAELKSVLALLKGFCM-KGLMNEADKVYQSILDRNWNLDGSVYS 596
Query: 442 CLLKGYCEEGNVENVMQIAHEMV 464
L+ G+C EGNV + +M+
Sbjct: 597 VLIHGHCREGNVMKALSFHKQML 619
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 148/328 (45%), Gaps = 54/328 (16%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+ P V Y +I GYC +G ++ A+++ M VKP+++ Y+T+++ +CK G+ A
Sbjct: 363 IQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAF 422
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ +M+ G P+ +TY+++I LC R+ +A +L M G + + T+ S++ G
Sbjct: 423 QLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGH 482
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G ++A+ +++A + PDV +Y V+ING K ++ EA LL ++ P
Sbjct: 483 CKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPAN 542
Query: 367 FSFNAVFR--------------------------------ILVENGELD----------- 383
++A+ R IL N LD
Sbjct: 543 IKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGH 602
Query: 384 -------RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+A+ KQM Q PN S ++I GL KG + + + ++ +++ D
Sbjct: 603 CREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGL-FEKGMVVEADQVIQQLLNCCSLAD 661
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L+ +EGNV+ V+ + H M
Sbjct: 662 AEASKALIDLNLKEGNVDAVLDVLHGMA 689
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 166/366 (45%), Gaps = 55/366 (15%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
++++ + LI + +G + A+ + +Q + YN+L+ V + A E
Sbjct: 329 QMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARE 388
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMG-----------MIENA--------------- 213
++ + V PDV TY+T++ YCK G M+EN
Sbjct: 389 LVREMEAKGV-KPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVL 447
Query: 214 ---KKVFDV---------MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
K++ D + ++P+ + Y ++I+G CK+G +E A +EM+ G P+
Sbjct: 448 CEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDV 507
Query: 262 LTYNAMIYGLCINGRVDEAKMLM----------AKMRLNGF-----KDNVSTHKSMLKGL 306
+TY+ +I GL + R EA+ L+ A ++ + + + ++LKG
Sbjct: 508 VTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGF 567
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C+ G ++A +++++ N N D Y V+I+G C+ G +A+S K+M G P
Sbjct: 568 CMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNS 627
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
S ++ R L E G + A +++Q+ L + + +I L + +G + V D++
Sbjct: 628 TSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALI-DLNLKEGNVDAVLDVLH 686
Query: 427 RMIRSG 432
M R G
Sbjct: 687 GMARDG 692
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 124/294 (42%), Gaps = 58/294 (19%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQI 184
S ++ AY G+ +A F +Q + +ENG +Y+SL+ VL + A F +
Sbjct: 406 STILSAYCKNGDTHSA-FQLNQ-QMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNM 463
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING------ 235
+ + P +V TYT++I G+CK G +E A + D M V P+++ Y+ +ING
Sbjct: 464 ISLGLQPDEV-TYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSAR 522
Query: 236 --------------------------------------------FCKKGELEEAKKCMNE 251
FC KG + EA K
Sbjct: 523 TKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQS 582
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
+++R + Y+ +I+G C G V +A +M GF N ++ S+++GL G
Sbjct: 583 ILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGM 642
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+A ++ ++ D ++ + +I+ K G D + +L M GL P+
Sbjct: 643 VVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 211/415 (50%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y + L +H ++S A SL++
Sbjct: 3 FFTWLSSPANST--FRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
N+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 61 VLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++
Sbjct: 121 KYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D A L +M
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLKP F++ + + G+LD A K+M Q + + V+Y +I
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLCQ-EGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 413
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 172/315 (54%), Gaps = 8/315 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ L + A + ++V +P D+ TYTT+I G+CK ++A +VF+
Sbjct: 56 TYNSLISGLCKAERASEAYDLLEEMVYSGCIP-DIFTYTTLITGFCKSKKSDDALRVFEQ 114
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLCING 275
+ + P+++ Y+ +I+G CK+G L+EA M+ G C PN +TYN++I G C G
Sbjct: 115 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 174
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++DEA L+ +M G +V T+ +++ G C + + D A L + + P+V ++
Sbjct: 175 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFT 234
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++G C+ + +A+ +L EMR + PTV+++N + +L+ A + + +M
Sbjct: 235 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEM 292
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
DC PN VS+N +I GLC R + +LV+ R N D MY+ ++ C E V+
Sbjct: 293 DCPPNVVSFNIMIRGLCKVN-RSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDE 351
Query: 456 VMQIAHEMVTKKGRL 470
++ +M+ + G L
Sbjct: 352 ACRVYRKMLEEPGCL 366
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 165/321 (51%), Gaps = 10/321 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLKN---SNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y ++ L S A LL+ S + D F + LI + A+ F Q
Sbjct: 57 YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 116
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ +Y+ L+ L + +K A + F +++K P+ TY ++I G+C+MG +
Sbjct: 117 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 176
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A + + M P+++ Y T++NGFCK L++A +N+M +G PN +T+ ++
Sbjct: 177 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSL 236
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ GLC R+ +A ++ +MR V T+ ++L G C V + ++A ++ + E +
Sbjct: 237 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDC 294
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P+V S+ ++I G CK+ +S EA+ L++E R R P V + V +L ++D A
Sbjct: 295 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACR 354
Query: 388 LLKQM-PQMDCLPNFVSYNTI 407
+ ++M + CLPN ++Y+T
Sbjct: 355 VYRKMLEEPGCLPNSITYSTF 375
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 2/209 (0%)
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P +TYN++I GLC R EA L+ +M +G ++ T+ +++ G C K D A+
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG-LKPTVFSFNAVFRILV 377
++ PDV +Y +I+G CK G+ EAI L M G P ++N++
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
G++D A+ LL++M + P+ V+Y T++ G C R+ D DL+++M R G +
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKL-ARLDDAYDLLNQMTRKGLTPNV 230
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ L+ G C E + + + I EM K
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRK 259
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 109/188 (57%), Gaps = 4/188 (2%)
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ S++ GLC + +A L ++ + PD+ +Y +I GFCK KSD+A+ + +++
Sbjct: 56 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 115
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM-DCLPNFVSYNTIICGLCMAKG 416
ARG +P V +++ + L + G L AI L +M + C+PN V+YN++I G C G
Sbjct: 116 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRM-G 174
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
+M + +L++RM +G + D Y+ L+ G+C+ +++ + ++M T+KG + F
Sbjct: 175 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM-TRKGLTPNVVTF 233
Query: 477 LTRVVDAL 484
T ++D L
Sbjct: 234 -TSLMDGL 240
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
V +A P +Y +I+G CK ++ EA LL+EM G P +F++ + ++ +
Sbjct: 45 VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM-Y 440
D A+ + +Q+ P+ V+Y+ +I GLC +GR+++ DL RMI+SG + T+ Y
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLC-KEGRLKEAIDLFGRMIKSGSCMPNTVTY 163
Query: 441 SCLLKGYCEEGNVENVMQIAHEMV 464
+ L+ G+C G ++ M + M
Sbjct: 164 NSLISGFCRMGKMDEAMNLLERMA 187
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 15/136 (11%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ + ++ +Y+YN++L RVN ++ A +F +++E PP+V ++ MI
Sbjct: 249 AVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF---MLEEMDCPPNVVSFNIMI 305
Query: 202 RGYCK-------MGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
RG CK M ++E A++ P+++ Y T+I+ C++ +++EA + +M+
Sbjct: 306 RGLCKVNRSSEAMELVEEARR----RRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLE 361
Query: 255 R-GCRPNELTYNAMIY 269
GC PN +TY+ Y
Sbjct: 362 EPGCLPNSITYSTFDY 377
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 218/458 (47%), Gaps = 58/458 (12%)
Query: 58 VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN 117
V V+ QT+P AL FN A + + + HT Y I L H LL
Sbjct: 10 VAAVVKIQTDPLKALEMFNSAKSED----GFKHTASTYKCIVQKLGHHGEFEEMEKLLSE 65
Query: 118 -----SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+N L + + +K YG +G V+ A+ F + ++S+N+++ +LV
Sbjct: 66 MRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFG 125
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM------------------------- 207
A + + ++ ++ V DV TYT I+ +CK
Sbjct: 126 YHNQAHKVYMRM-RDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAY 184
Query: 208 ----------GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
G ++A+++FD M + P+++A+N +++ CKKG + E+++ + +++
Sbjct: 185 CTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLK 244
Query: 255 RGCRPNELTYNAMIYGLCING---------RVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
RG PN T+N + GLC G RV EA+ + KM GF+ + T+ S++ G
Sbjct: 245 RGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDG 304
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G A L++ + PD +Y +INGFCK G D A+++ K+ +GL+P+
Sbjct: 305 YCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPS 364
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +N + + L + G + A+ L+ +M + CLPN +YN +I GLC G + D LV
Sbjct: 365 IVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLC-KMGCVSDASHLV 423
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D I G D Y+ L+ GYC++ +++ ++ + M
Sbjct: 424 DDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRM 461
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 147/280 (52%), Gaps = 5/280 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
P + Y T+I+G + G+I A ++ + M PN+ YN +ING CK G + +A
Sbjct: 363 PSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHL 422
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+++ + +GC P+ TYN +I G C ++D A ++ +M G +V T+ ++L GLC
Sbjct: 423 VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCK 482
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
GK ++ + + + E P++ +Y ++++ CK K +EA+ LL EM+++GLKP V S
Sbjct: 483 AGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVS 542
Query: 369 FNAVFRILVENGELDRAILLLKQMP-QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
F +F + G++D A L ++M Q D +YN I+ + M L
Sbjct: 543 FGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFS-EQLNMNMAMKLFSV 601
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
M SG + D Y ++ G+C+ GN+ + E + K+
Sbjct: 602 MKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKR 641
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 168/351 (47%), Gaps = 49/351 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ VL + + +E +++K V P ++ T+ ++G C+ G ++ A + V
Sbjct: 218 AFNKLVHVLCKKGLVFESERLLGKVLKRGVCP-NLFTFNIFVQGLCREGALDRAVRNSRV 276
Query: 220 MTVK------------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ + P+ L YN++I+G+CKKG +++A + + + + +G +P+E TY ++
Sbjct: 277 VEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSL 336
Query: 268 IYGLCINGRVDEAK-----------------------------------MLMAKMRLNGF 292
I G C +G D A LM +M NG
Sbjct: 337 INGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGC 396
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
N+ T+ ++ GLC +G A + + + PD+ +Y +I+G+CK K D A
Sbjct: 397 LPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATE 456
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
++ M ++G+ P V ++N + L + G+ + + + K M + C PN ++YN I+ LC
Sbjct: 457 MVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLC 516
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
AK ++ + DL+ M G D + L G+C+ G+++ Q+ M
Sbjct: 517 KAK-KVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 176/396 (44%), Gaps = 56/396 (14%)
Query: 149 AKQIENGAC--LYSYN---------SLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
K ++ G C L+++N L VR + + AEE+ ++V P D+ TY
Sbjct: 240 GKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDL-TY 298
Query: 198 TTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAK-------- 246
++I GYCK GM+++A +V KP+ Y ++INGFCK G+ + A
Sbjct: 299 NSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLG 358
Query: 247 ---------------------------KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+ MNEM GC PN TYN +I GLC G V +
Sbjct: 359 KGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSD 418
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L+ G ++ T+ +++ G C K D A + + M PDV +Y ++N
Sbjct: 419 ASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLN 478
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G CK GKS+E + + K M +G P + ++N + L + +++ A+ LL +M P
Sbjct: 479 GLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKP 538
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT-MYSCLLKGYCEEGNVENVMQ 458
+ VS+ T+ G C G + L RM + T Y+ ++ + E+ N+ M+
Sbjct: 539 DVVSFGTLFTGFCKI-GDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMK 597
Query: 459 IAHEMVTKKGRLLKLKNFLTRVV-DALLLMWIVTGG 493
+ M K N+ RVV D M +T G
Sbjct: 598 LFSVM---KNSGCDPDNYTYRVVIDGFCKMGNITQG 630
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 168/360 (46%), Gaps = 52/360 (14%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LIK +G + A+ ++ ENG CL ++YN ++ L ++ + A +
Sbjct: 371 LIKGLSQQGLILPALQLMNE--MAENG-CLPNIWTYNLVINGLCKMGCVSDASHLVDDAI 427
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGEL 242
+ PPD+ TY T+I GYCK +++A ++ + M + P+++ YNT++NG CK G+
Sbjct: 428 AKGC-PPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKS 486
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EE + M +GC PN +TYN ++ LC +V+EA L+ +M+ G K +V + ++
Sbjct: 487 EEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTL 546
Query: 303 LKGLCVVGKFDQAVGYLR---------------NVM------EANMN------------- 328
G C +G D A R N++ + NMN
Sbjct: 547 FTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSG 606
Query: 329 --PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
PD +Y VVI+GFCK+G + L E + P++ +F V L ++ A+
Sbjct: 607 CDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAV 666
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
++ M Q +P V NTI K + + LV+ +++ GH + + Y L G
Sbjct: 667 GIIHLMLQKGIVPETV--NTIFEA---DKKVVAAPKILVEDLLKKGH-IAYYTYELLYDG 720
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 148/312 (47%), Gaps = 13/312 (4%)
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPN- 225
V ++ + +K A E F+ E+ STY +++ G E +K+ M N
Sbjct: 14 VKIQTDPLK-ALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNN 72
Query: 226 -LL--AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
LL AY + + +KG+++EA M C P+ ++NA++ L G ++A
Sbjct: 73 ALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHK 132
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
+ +MR G + +V T+ +K C + A+ LRN+ E + + +Y V+ G
Sbjct: 133 VYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLY 192
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
G+ D A L EM AR L P V +FN + +L + G + + LL ++ + PN
Sbjct: 193 DSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLF 252
Query: 403 SYNTIICGLC--------MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
++N + GLC + R+ + E+ + +M+ G D Y+ ++ GYC++G V+
Sbjct: 253 TFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQ 312
Query: 455 NVMQIAHEMVTK 466
+ ++ + V K
Sbjct: 313 DANRVLKDAVFK 324
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 191/368 (51%), Gaps = 38/368 (10%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
+ N+ A F + Q + +++YN L+ ++ +A FF ++ K+ +P +V
Sbjct: 183 KRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLP-NVV 241
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY T+I GYCK+ I++ ++ M +K PNL++YN +ING C++G ++E + EM
Sbjct: 242 TYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEM 301
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
RG +E+TYN +I G C G +A ++ A+M +G +V T+ S++ +C G
Sbjct: 302 NKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNM 361
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
++A +L + + P+ ++Y +++GF + G +EA +LKEM G P+V ++NA+
Sbjct: 362 NRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNAL 421
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC---------------MAKG- 416
G++ AI +L+ M + P+ VSY+T++ G C +AKG
Sbjct: 422 INGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGI 481
Query: 417 ------------------RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
R ++ DL D M+R G D Y+ L+ YC EG+++ +Q
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQ 541
Query: 459 IAHEMVTK 466
+ +EMV K
Sbjct: 542 LHNEMVEK 549
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 158/335 (47%), Gaps = 55/335 (16%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
+ P V TYT++I CK G + A + D M V+ PN Y T+++GF +KG + EA
Sbjct: 341 LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + EM++ G P+ +TYNA+I G CI G++ +A ++ M+ G +V ++ ++L G
Sbjct: 401 RVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGF 460
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C D+A+ R ++ + PD +Y +I GFC+ ++ EA L EM GL P
Sbjct: 461 CRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDE 520
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL--------------- 411
F++ A+ G+L +AI L +M + LP+ V+Y+ +I GL
Sbjct: 521 FTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLK 580
Query: 412 -----------------------------------CMAKGRMQDVEDLVDRMIRSGHNLD 436
CM KG M + + + + M+ H D
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCM-KGMMTEADQVFESMLEKNHKPD 639
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLL 471
T Y+ ++ G+C G++ + EMV K G LL
Sbjct: 640 GTAYNVMIHGHCRGGDIRKAYSLYKEMV-KSGFLL 673
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 209/502 (41%), Gaps = 71/502 (14%)
Query: 5 RRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYE 64
RRSL+ + P S+L + ++R P + + F+ SN++ K
Sbjct: 9 RRSLSTFTSSPSDSLLADKALTFLKR------HPYQLHHLSAN-FTPEAASNLLLK---S 58
Query: 65 QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN--SNKLS 122
Q N L F WA NP+++ T C +L L A +L ++ + L
Sbjct: 59 QNNQELILKFLTWA-----NPHQFF-TLRCKCITLHILTRFKLYKTAQTLAEDVAAKTLD 112
Query: 123 D---FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
D + + ++ D N +++F YS L+ + + + A
Sbjct: 113 DEDASLVFRSLQETYDLCNSTSSVFDLVVKS--------YSRLCLIDKALSIVHLSQAHG 164
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKK 239
F ++ N V IR + EN K V PN+ YN +I GFC
Sbjct: 165 FMPGVLSYNAV------LDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLA 218
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAM-------------------------------- 267
G L+ A + + M +GC PN +TYN +
Sbjct: 219 GNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISY 278
Query: 268 ---IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
I GLC GR+ E ++ +M G+ + T+ +++KG C G F QA+ ++
Sbjct: 279 NVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
++P V +Y +I+ CK G + A L +MR RGL P ++ + + G ++
Sbjct: 339 HGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A +LK+M P+ V+YN +I G C+A G+M D +++ M G D YS +L
Sbjct: 399 AYRVLKEMIDNGFSPSVVTYNALINGHCIA-GKMVDAIAVLEDMKEKGLTPDVVSYSTVL 457
Query: 445 KGYCEEGNVENVMQIAHEMVTK 466
G+C +V+ +++ +MV K
Sbjct: 458 SGFCRSYDVDEALRVKRKMVAK 479
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 177/439 (40%), Gaps = 94/439 (21%)
Query: 116 KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNS 173
K L + + LIK Y GN A+ A+ + +G + +Y SL+ + + +
Sbjct: 303 KRGYSLDEVTYNTLIKGYCKEGNFHQALVM--HAEMLRHGLSPSVITYTSLIHSMCKAGN 360
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYN 230
+ A EF Q+ + P + TYTT++ G+ + G + A +V M P+++ YN
Sbjct: 361 MNRATEFLDQMRVRGLCPNE-RTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYN 419
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+ING C G++ +A + +M +G P+ ++Y+ ++ G C + VDEA + KM
Sbjct: 420 ALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAK 479
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G K + T+ S+++G C + +A ++ + PD +Y +IN +C G +A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKA 539
Query: 351 ISLLKEMRARGLKPTVFSF-------------------------------NAVFRILVEN 379
I L EM +G+ P V ++ + + L+EN
Sbjct: 540 IQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 380 -------------------GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G + A + + M + + P+ +YN +I G C G ++
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRG-GDIRK 658
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGY-------------------CE------------ 449
L M++SG L L+K CE
Sbjct: 659 AYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVE 718
Query: 450 ----EGNVENVMQIAHEMV 464
EGN++ V+ + EM
Sbjct: 719 INHREGNMDVVLDVLAEMA 737
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 166/360 (46%), Gaps = 24/360 (6%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSDFFIS--KLIKAYGDRGNVKAAIFWFHQAK 150
YT + D ++ A +LK N S ++ LI + G + AI K
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMK 442
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + SY+++L R + A ++V + + PD TY+++I+G+C+
Sbjct: 443 EKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGI-KPDTITYSSLIQGFCEQRRT 501
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A +FD M + P+ Y +IN +C +G+L++A + NEM+ +G P+ +TY+ +
Sbjct: 502 KEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVL 561
Query: 268 IYGLCINGRVDEAKMLMAKMRLN-GFKDNVSTHK--------------SMLKGLCVVGKF 312
I GL R EAK L+ K+ +V+ H S++KG C+ G
Sbjct: 562 INGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+A +++E N PD +Y V+I+G C+ G +A SL KEM G + A+
Sbjct: 622 TEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIAL 681
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ L + G+++ ++ + + C + ++ + +G M V D++ M + G
Sbjct: 682 VKTLHKEGKVNELNSVIANVLR-SCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 120/257 (46%), Gaps = 21/257 (8%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI+ + ++ K A F + ++ ++Y +L+ ++ A + +++V+
Sbjct: 489 SSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVE 548
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAK----KVFDVMTVKPNLLAYNTMIN-------- 234
+ V+P DV TY+ +I G K AK K+F +V P+ + Y+T+I
Sbjct: 549 KGVLP-DVVTYSVLINGLNKQARTREAKRLLLKLFYEESV-PSDVTYHTLIENCSNIEFK 606
Query: 235 -------GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
GFC KG + EA + M+ + +P+ YN MI+G C G + +A L +M
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEM 666
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+GF + T +++K L GK ++ + NV+ + + + +V++ + G
Sbjct: 667 VKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNM 726
Query: 348 DEAISLLKEMRARGLKP 364
D + +L EM G P
Sbjct: 727 DVVLDVLAEMAKDGFLP 743
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 211/415 (50%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y + L +H ++S A SL++
Sbjct: 3 FFTWLSSPANST--FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAT 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++
Sbjct: 121 RYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D+A L +M
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 240 VKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLKP F++ + + G+LD A K+M Q + + V+Y +I
Sbjct: 300 QAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLC-QEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEM 413
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 115/264 (43%), Gaps = 19/264 (7%)
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC------------------RPNEL 262
T + L +Y TMI+ C L EAK + +++R R +
Sbjct: 14 TFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIY 73
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
++ +I +G + +A R + T + +L+ L + F G+ +
Sbjct: 74 VFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEI 133
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+E + + ++++ FCK G A S+ + GL+P+V S+N + + G+L
Sbjct: 134 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
D L M P+ +Y+ +I GLC + +M D +L D M+ G + ++
Sbjct: 194 DEGFRLKSAMLASGVQPDVYTYSVLINGLC-KESKMDDANELFDEMLVKGLIPNGVTFTT 252
Query: 443 LLKGYCEEGNVENVMQIAHEMVTK 466
L+ G+C+ G V+ M+I M+++
Sbjct: 253 LIXGHCKNGRVDLAMEIYKXMLSQ 276
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 205/421 (48%), Gaps = 30/421 (7%)
Query: 67 NPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL------KNSNK 120
+P L FF W S + + + Y +T L +H ++S A SLL K N
Sbjct: 82 SPPSLLSFFKWLSTQH----HFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNS 137
Query: 121 LSDFF---------------ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
S F S L+ AY D G AI F ++ +S L
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLF 197
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---V 222
L+++N A F+ +I+ + PPDV + ++ CK I A+ +F + +
Sbjct: 198 DRLMKLNLTSPAWAFYEEIL-DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGL 256
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P ++++NT+ING+CK G L++ + MM P+ TY+ +I GLC G++D+A
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANK 316
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M G N T +++ G CV G+ D + + ++ + PDV +Y +ING C
Sbjct: 317 LFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLC 376
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K+G EA L+ EM RGLKP F++ + + G+L+ A+ + K+M + + V
Sbjct: 377 KVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV 436
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++ +I G C +G++ + E + M+ +G D Y+ ++ G+C++G+V+ ++ E
Sbjct: 437 AFTALISGFC-REGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495
Query: 463 M 463
M
Sbjct: 496 M 496
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 163/300 (54%), Gaps = 13/300 (4%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y+ L+ L + + A + F ++ +VP DV T+TT+I G+C G + +++
Sbjct: 295 VFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV-TFTTLINGHCVTGRADLGMEIY 353
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M VKP+++ YNT+ING CK G+L EAKK + EM RG +P++ TY +I G C
Sbjct: 354 QQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKE 413
Query: 275 GRVDEAKMLMAKMRLNGFK-DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G ++ A + +M G + DNV+ +++ G C G+ +A LR ++EA + PD +
Sbjct: 414 GDLESALEIRKEMVKEGIELDNVA-FTALISGFCREGQVIEAERTLREMLEAGIKPDDAT 472
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +VI+GFCK G LLKEM+ G P V ++N + L + G++ A +LL M
Sbjct: 473 YTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAML 532
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL---LKGYCEE 450
+ +P+ ++YN ++ G C R ED G D+ Y+ L L+ C+E
Sbjct: 533 NLGVVPDDITYNILLEGHCKHGNR----EDFDKLQSEKGLVQDYGSYTSLIGDLRKTCKE 588
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 2/178 (1%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G+ +V ++ LC K ++A + + + P V S+ +ING+CK G D+
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
L + M + P VF+++ + L + G+LD A L +M +PN V++ T+I G
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
C+ GR ++ +M+R G D Y+ L+ G C+ G++ ++ EM T++G
Sbjct: 340 HCVT-GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM-TQRG 395
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 176/344 (51%), Gaps = 11/344 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
S +I GN A+ K++E C + +YN+++ L + + A +FF +
Sbjct: 49 STIINGLCKMGNTTMAL---QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSE 105
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+VKE + PPDV TY++++ G+C +G + A +F M V PN + + +I+G CKK
Sbjct: 106 MVKEGI-PPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKR 164
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ EA M +G P+ TYNA++ G C ++DEA+ L M G NV ++
Sbjct: 165 MISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYN 224
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ G C G+ D+A G L + ++ PD+ +Y ++ GFC++G+ EA LLKEM +
Sbjct: 225 ILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSY 284
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GL P + +++ V L ++G LD A LLK M + PN Y +I G+C G+++
Sbjct: 285 GLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMC-TFGKLEA 343
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+L + G Y+ ++ G + G ++ EM
Sbjct: 344 ARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMA 387
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 178/356 (50%), Gaps = 9/356 (2%)
Query: 95 YTAITDVLLSHSLISIA----ASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y I D L L++ A + ++K F S ++ + + G V A F Q
Sbjct: 83 YNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMV 142
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ ++ L+ L + I A F + + E + PDV TY ++ GYC +
Sbjct: 143 ERNVIPNKVTFTILIDGLCKKRMISEAWLVF-ETMTEKGLEPDVYTYNALVDGYCSRSQM 201
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+K+F++M K PN+ +YN +ING CK G ++EAK + EM ++ P+ TY+ +
Sbjct: 202 DEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTL 261
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ G C GR EA+ L+ +M G N+ T+ +L GLC G D+A L+ + E+ +
Sbjct: 262 MRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKI 321
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P++ Y ++I G C GK + A L + +G++PTV ++ + L++ G + A
Sbjct: 322 EPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACE 381
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
L ++M CLPN +YN II G + G + L++ M+ G + D + + L
Sbjct: 382 LFREMAVNGCLPNSCTYNVIIQGF-LRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 150/277 (54%), Gaps = 4/277 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKC 248
P + T+ T++ G C I +A K+FD M +P+++ Y+T+ING CK G A +
Sbjct: 8 PTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQL 67
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +M +GC+PN + YN +I LC + V EA ++M G +V T+ S+L G C
Sbjct: 68 LKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCN 127
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+G+ ++A + ++E N+ P+ ++ ++I+G CK EA + + M +GL+P V++
Sbjct: 128 LGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYT 187
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+NA+ ++D A L M + C PN SYN +I G C + GR+ + + L+ M
Sbjct: 188 YNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKS-GRIDEAKGLLAEM 246
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
D YS L++G+C+ G + ++ EM +
Sbjct: 247 SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCS 283
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 3/216 (1%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M G +P +T+N ++ GLC ++ +A L +M G + +V T+ +++ GLC +G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
A+ L+ + E P+V +Y +I+ CK EA+ EM G+ P VF++++
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV-DRMIR 430
+ G ++ A L KQM + + +PN V++ +I GLC K RM LV + M
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLC--KKRMISEAWLVFETMTE 178
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G D Y+ L+ GYC ++ ++ + M K
Sbjct: 179 KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRK 214
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 211/415 (50%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y + L +H ++S A SL++
Sbjct: 3 FFTWLSSPANST--FRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 61 IXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++
Sbjct: 121 KYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D+A L +M
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLKP ++ + + G+LD A K+M Q + + V+Y +I
Sbjct: 300 QAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLCQ-EGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEM 413
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 176/342 (51%), Gaps = 5/342 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +++ Y + GN+ A+ Q + + N L+ + I A F + V
Sbjct: 242 TTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVS 301
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
E PD TY T++ G CK+G ++A +V D M + P++ YN++I+G CK GE+E
Sbjct: 302 EGF-RPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIE 360
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA K +++M++R C PN +TYNA+I LC RVDEA + + G +V T S++
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLI 420
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+GLC+ A+ + PD +Y ++I+ C K +EA++LLKEM G
Sbjct: 421 QGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCA 480
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
V +N + +N ++ A + +M + V+YNT+I GLC +K R++D
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSK-RVEDAAQ 539
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
L+D+MI G D Y+ LL +C+ G+++ I M +
Sbjct: 540 LMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTS 581
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 187/383 (48%), Gaps = 40/383 (10%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
+D ++ LI + +G + A+ + +A ++YN+L+ L ++ K A E
Sbjct: 272 TDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVV 331
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
++ + PD+ TY ++I G CK+G IE A K+ D M + PN + YN +I+ CK
Sbjct: 332 DAMLLGGL-DPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCK 390
Query: 239 KGELEEAKK------------------------CMN-----------EMMNRGCRPNELT 263
+ ++EA + C++ EM +GCRP+E T
Sbjct: 391 ENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFT 450
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YN +I LC + +++EA L+ +M LNG NV + +++ G C + ++A +
Sbjct: 451 YNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 510
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
++ D +Y +I+G CK + ++A L+ +M GL+P F++N++ + G++
Sbjct: 511 LQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIK 570
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+A +++ M C P+ V+Y T+I GLC A GR+Q L+ + G L Y+ +
Sbjct: 571 KAADIVQTMTSSGCNPDIVTYATLISGLCKA-GRVQVASRLLRSIQMKGMVLTPHAYNPV 629
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
++ + M++ EM+ K
Sbjct: 630 IQALFKRNRTHEAMRLFREMLDK 652
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 204/453 (45%), Gaps = 41/453 (9%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
N++ +Q AL F A + P+++ + T H++ + A LL
Sbjct: 277 NVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLL 336
Query: 116 KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK 175
+ + + LI G ++ A+ Q + +YN+++ L + N +
Sbjct: 337 GGLDP-DIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVD 395
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP----------- 224
A E + + ++P DV T+ ++I+G C ++A +F+ M K
Sbjct: 396 EATEIARLLTSKGILP-DVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNML 454
Query: 225 ---------------------------NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
N++ YNT+I+GFCK +EEA++ +EM +G
Sbjct: 455 IDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGV 514
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
+ +TYN +I GLC + RV++A LM +M + G + + T+ S+L C G +A
Sbjct: 515 SRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAAD 574
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
++ + + NPD+ +Y +I+G CK G+ A LL+ ++ +G+ T ++N V + L
Sbjct: 575 IVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALF 634
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ A+ L ++M P+ ++Y + GLC G + + D MI G+ +F
Sbjct: 635 KRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEF 694
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ + L +G C + ++++ +M+ +K +
Sbjct: 695 SSFVMLAEGLCTLSMDDTLVKLV-DMIMEKAKF 726
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 186/416 (44%), Gaps = 45/416 (10%)
Query: 60 KVIYEQTNPYHALFFFNWAS-NPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNS 118
+ + QT+ AL FNWAS PN P+ S+ +L+
Sbjct: 69 ETLRRQTDEVAALRVFNWASKQPNFVPSS---------------------SVYEEILRKL 107
Query: 119 NKLSDF-FISKLIKAYGDRG-NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKL 176
K F ++ ++++ G IF +E+ Y+ ++G+ +K+
Sbjct: 108 GKAGSFEYMRRVLEEMKLSGCEFDRGIFLIF----VESYGKFELYDEVVGI------VKV 157
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYC---KMGMIENAKKVFDVMTVKPNLLAYNTMI 233
E+ E + PD Y ++ K+ ++E+A ++ ++ +N +I
Sbjct: 158 MED-------EYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILI 210
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
CK ++ A M EM + G P+E T+ ++ G G +D A + +M G
Sbjct: 211 KALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCP 270
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
T ++ G C G+ DQA+ +++ + PD +Y ++NG CKIG + A+ +
Sbjct: 271 CTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEV 330
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
+ M GL P ++++N++ L + GE++ A+ +L QM DC PN V+YN II LC
Sbjct: 331 VDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLC- 389
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+ R+ + ++ + G D ++ L++G C N ++ M + EM K R
Sbjct: 390 KENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCR 445
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 191/400 (47%), Gaps = 47/400 (11%)
Query: 102 LLSHSLISIAASLLKNSNKLSD----FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC 157
L++ ++ AA L++ S+ + + +KLI+ RG A A+
Sbjct: 49 LIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVD 108
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN+L+ R + A +++ VPPD TYT +IRG C G + +A +
Sbjct: 109 VFAYNTLVAGYCRYGRLDAA----RRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALL 164
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +P+++ Y ++ CK EA ++EM +GC PN +TYN +I G+C
Sbjct: 165 DDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 224
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD--------------------- 313
GRVD+AK ++ ++ GF+ ++ ++ ++LKGLC ++D
Sbjct: 225 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 284
Query: 314 --------------QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+A+ L+ + + P+ +VIN CK G+ D+A L M
Sbjct: 285 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 344
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G P S+ V R L G + A LL +M + +C PN V++NT IC LC KG ++
Sbjct: 345 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQ-KGLIE 403
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
L++ M G ++ Y+ L+ G+C +G V++ +++
Sbjct: 404 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALEL 443
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 144/277 (51%), Gaps = 1/277 (0%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
P DV Y T++ GYC+ G ++ A+++ M V P+ Y +I G C +G + +A +
Sbjct: 105 APVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALL 164
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++M+ RGC+P+ +TY ++ +C + EA ++ +MR G N+ T+ ++ G+C
Sbjct: 165 DDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 224
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G+ D A L + PD+ SY V+ G C + D+ L EM + P +F
Sbjct: 225 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 284
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ + R G ++RAI +L+QM Q C PN N +I +C +GR+ D D ++ M
Sbjct: 285 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAIC-KQGRVDDAYDFLNNMG 343
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G N D Y+ +L+G C G E+ ++ EMV K
Sbjct: 344 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRK 380
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 192/390 (49%), Gaps = 10/390 (2%)
Query: 78 ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRG 137
AS P P P+ Y +T P + D +++ +L+ + S + L++A
Sbjct: 133 ASMPVP-PDAYTYT-PIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSS 190
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
A+ + + + +YN ++ + R + A+E +++ PD+ +Y
Sbjct: 191 GFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGF-QPDIVSY 249
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
TT+++G C ++ K +F M K PN + ++ ++ FC+ G +E A + + +M
Sbjct: 250 TTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQ 309
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
GC PN N +I +C GRVD+A + M + G + ++ ++L+GLC G+++
Sbjct: 310 HGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEH 369
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A L ++ N P+ ++ I C+ G ++AI L++ M G + ++NA+
Sbjct: 370 AKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVH 429
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
G +D A+ L +P C PN ++Y T++ GLC A+ R+ +L+ MI+
Sbjct: 430 GFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAE-RLDAAAELLAGMIQKDCP 485
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L+ ++ L+ +C++G VE M++ ++M+
Sbjct: 486 LNAVTFNVLVSFFCQKGFVEEAMELVNQMM 515
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 121/240 (50%), Gaps = 4/240 (1%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P++ +I C++G +A + + G + YN ++ G C GR+D A+ L
Sbjct: 72 PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRL 131
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+A M + + T+ +++GLC G+ A+ L ++++ P V +Y V++ CK
Sbjct: 132 IASMPV---PPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCK 188
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
EA+++L EMRA+G P + ++N + + G +D A +L ++ P+ VS
Sbjct: 189 SSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVS 248
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y T++ GLC A+ R DV+ L M+ + + L++ +C G VE +Q+ +M
Sbjct: 249 YTTVLKGLCAAR-RWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM 307
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 117/229 (51%), Gaps = 4/229 (1%)
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ +L EA + + +RG P+ +I LC GR +A ++ +G +V
Sbjct: 52 RDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFA 111
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ G C G+ D A R + + PD +Y +I G C G+ +A++LL +M
Sbjct: 112 YNTLVAGYCRYGRLDAA---RRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDML 168
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
RG +P+V ++ + + ++ A+ +L +M C PN V+YN II G+C +GR+
Sbjct: 169 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR-EGRV 227
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D +++++R+ G D Y+ +LKG C ++V + EMV KK
Sbjct: 228 DDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 276
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 136/286 (47%), Gaps = 34/286 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS------------------------ 195
SY ++L L R + A+E ++V++N P +V+
Sbjct: 353 SYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 412
Query: 196 ----------TYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEA 245
TY ++ G+C G +++A ++F+ + +PN + Y T++ G C L+ A
Sbjct: 413 PEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAA 472
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + M+ + C N +T+N ++ C G V+EA L+ +M +G N+ T ++L G
Sbjct: 473 AELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDG 532
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+ ++A+ L ++ ++ D +Y V++ + +++EAI +L ++ G++P
Sbjct: 533 ITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPK 592
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
V +N + L + E D+AI M C+PN +Y +I GL
Sbjct: 593 VGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 638
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 118/237 (49%), Gaps = 7/237 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + +G V +A+ F+ N +Y +LL L + A E +++++
Sbjct: 427 LVHGFCVQGRVDSALELFNNLPCEPN---TITYTTLLTGLCHAERLDAAAELLAGMIQKD 483
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P + T+ ++ +C+ G +E A ++ + M PNL+ +NT+++G K EEA
Sbjct: 484 C-PLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 542
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ ++++G + +TY++++ L R +EA ++ ++ G + V + +L
Sbjct: 543 LELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 602
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
LC + DQA+ + ++ P+ +Y ++I G G EA +L E+ A+G+
Sbjct: 603 LCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 659
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 178/347 (51%), Gaps = 40/347 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+YNS++ +L + + AE +++ + +VP D YTT+I G+CK+G I+ A K+F
Sbjct: 45 LYTYNSIILLLCKSGKVDDAERVLREMINQGIVP-DTVVYTTLIDGFCKLGNIQAAYKLF 103
Query: 218 DVMT--------------------------------------VKPNLLAYNTMINGFCKK 239
D M V+P+ + Y T+I+G+CK
Sbjct: 104 DEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKS 163
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
GE+E+A N+M+ G PN +TY A+ GLC G+VD A L+ +M G + N+ T+
Sbjct: 164 GEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTY 223
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S++ GLC G QAV + + A M PD ++ +++ +CK G+ +A LL+EM
Sbjct: 224 NSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLD 283
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RGL+PTV +FN + +G L+ LL M + +PN +YN+++ C+ + M+
Sbjct: 284 RGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCI-RNNMR 342
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ M G D Y+ L+KG+C+ N++ + EM K
Sbjct: 343 CTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEK 389
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 170/351 (48%), Gaps = 52/351 (14%)
Query: 154 NGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
NG CL G L +V +KL +E + +K P++ TY ++I CK G +++A
Sbjct: 18 NGYCLG------GELQKV--LKLIQEMQMKGLK-----PNLYTYNSIILLLCKSGKVDDA 64
Query: 214 KKVFDVMT---VKPNLLAYNTMINGFCKKGELE--------------------------- 243
++V M + P+ + Y T+I+GFCK G ++
Sbjct: 65 ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124
Query: 244 --------EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
EA K N+M +RG P+E+TY +I G C +G +++A L +M +G N
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V T+ ++ GLC +G+ D A L + + ++ +Y ++NG CK G +A+ L++
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
EM G+ P +F + + GE+ +A LL++M P +++N ++ G CM+
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS- 303
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G ++D E L+ M+ G + T Y+ L+K YC N+ +I M +
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR 354
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 156/313 (49%), Gaps = 27/313 (8%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P++++Y+T+ING+C GEL++ K + EM +G +PN TYN++I LC +G+VD+A+ +
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +M G + + +++ G C +G A + + + PD +Y VI G C+
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GK EA + +M +RG++P ++ + ++GE+++A L QM Q PN V+
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y + GLC G++ +L+ M G L+ Y+ L+ G C+ GN+ +++ EM
Sbjct: 188 YTALADGLCKL-GQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246
Query: 464 ------------------VTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQV 505
K G ++K L ++D L ++T ++ F
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFC----- 301
Query: 506 VVIMERTVEDGKR 518
M +EDG+R
Sbjct: 302 ---MSGMLEDGER 311
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 148/279 (53%), Gaps = 4/279 (1%)
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKK 247
PDV +Y+T+I GYC G ++ K+ M +KPNL YN++I CK G++++A++
Sbjct: 7 APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ EM+N+G P+ + Y +I G C G + A L +M + + +++ GLC
Sbjct: 67 VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
GK +A + + PD +Y +I+G+CK G+ ++A SL +M GL P V
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++ A+ L + G++D A LL +M N +YN+++ GLC + G ++ L++
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKS-GNIRQAVKLMEE 245
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M +G D ++ L+ YC+ G + ++ EM+ +
Sbjct: 246 MEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDR 284
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 152/308 (49%), Gaps = 5/308 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y G ++ A +Q Q + +Y +L L ++ + A E H++
Sbjct: 154 TTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCG 213
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ + ++ TY +++ G CK G I A K+ + M V P+ + + T+++ +CK GE+
Sbjct: 214 KGL-QLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMV 272
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + + EM++RG +P +T+N ++ G C++G +++ + L+A M G N +T+ S++
Sbjct: 273 KAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM 332
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
K C+ + + + PD +Y ++I G CK EA L KEM +G
Sbjct: 333 KQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFN 392
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
T S+N++ + + ++ A L ++M + + YN + + +G M+ +
Sbjct: 393 LTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFV-DISYGEGNMETALE 451
Query: 424 LVDRMIRS 431
L D I +
Sbjct: 452 LCDEAIEN 459
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 1/212 (0%)
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
RG P+ ++Y+ +I G C+ G + + L+ +M++ G K N+ T+ S++ LC GK D
Sbjct: 4 RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A LR ++ + PD Y +I+GFCK+G A L EM + + P ++ AV
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L G++ A + +M P+ V+Y T+I G C + G M+ L ++M++SG
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKS-GEMEKAFSLHNQMVQSGLT 182
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ Y+ L G C+ G V+ ++ HEM K
Sbjct: 183 PNVVTYTALADGLCKLGQVDTANELLHEMCGK 214
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 174/345 (50%), Gaps = 38/345 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP--------------------------- 191
Y Y S++G+L R+ + AEE F +++++ ++P
Sbjct: 760 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 819
Query: 192 -------PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
PDV TYT +I G+C++G + A K+F M K P+ + + +ING+CK G
Sbjct: 820 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 879
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+++A + N M+ GC PN +TY +I GLC G +D A L+ +M G + N+ T+ S
Sbjct: 880 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 939
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GLC G ++AV + A +N D +Y +++ +CK G+ D+A +LKEM +G
Sbjct: 940 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 999
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+PT+ +FN + +G L+ LL M PN ++N+++ C+ + ++
Sbjct: 1000 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI-RNNLKAA 1058
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M G D Y L+KG+C+ N++ + EM K
Sbjct: 1059 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 1103
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 162/319 (50%), Gaps = 7/319 (2%)
Query: 153 ENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
E G C + SYN ++ + ++ IK A +++ PDV +Y+T++ GYC+ G +
Sbjct: 682 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLL-LLMELKGYTPDVISYSTVVNGYCRFGEL 740
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ K+ +VM +KPN Y ++I C+ +L EA++ +EM+ +G P+ + Y +
Sbjct: 741 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 800
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C G + A +M +V T+ +++ G C +G +A + +
Sbjct: 801 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 860
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD ++ +ING+CK G +A + M G P V ++ + L + G+LD A
Sbjct: 861 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 920
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LL +M ++ PN +YN+I+ GLC + G +++ LV +G N D Y+ L+ Y
Sbjct: 921 LLHEMWKIGLQPNIFTYNSIVNGLCKS-GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 979
Query: 448 CEEGNVENVMQIAHEMVTK 466
C+ G ++ +I EM+ K
Sbjct: 980 CKSGEMDKAQEILKEMLGK 998
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 141/270 (52%), Gaps = 4/270 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
++LI Y G++K A + Q + +Y +L+ L + + A E H++
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGEL 242
K + P++ TY +++ G CK G IE A K+ F+ + + + Y T+++ +CK GE+
Sbjct: 927 KIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 985
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A++ + EM+ +G +P +T+N ++ G C++G +++ + L+ M G N +T S+
Sbjct: 986 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 1045
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+K C+ A +++ + PD K+YE ++ G CK EA L +EM+ +G
Sbjct: 1046 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 1105
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQM 392
+V +++ + + ++ + A + QM
Sbjct: 1106 SVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 120/239 (50%), Gaps = 4/239 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI G++ +A H+ +I +++YNS++ L + +I+ A + +
Sbjct: 903 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ D TYTT++ YCK G ++ A+++ M ++P ++ +N ++NGFC G LE
Sbjct: 963 AGL-NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1021
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+ +K +N M+ +G PN T+N+++ CI + A + M G + T+++++
Sbjct: 1022 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 1081
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
KG C +A + + + V +Y V+I GF K K EA + +MR GL
Sbjct: 1082 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
Query: 275 GRVDEAKMLMAKMRLNGFK---DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
G + EA+ + KM G D+ + + + L C K A+ R E + +V
Sbjct: 632 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--KTATAIIVFREFPEVGVCWNV 689
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
SY +VI+ C++G+ EA LL M +G P V S++ V GELD+ L++
Sbjct: 690 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 749
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + PN Y +II LC ++ + E+ MIR G D +Y+ L+ G+C+ G
Sbjct: 750 MKRKGLKPNSYIYGSIIGLLCRI-CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 808
Query: 452 NVENVMQIAHEMVTK 466
++ + +EM ++
Sbjct: 809 DIRAASKFFYEMHSR 823
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 176/306 (57%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ + + + A + + + V + + P DV TY +I G+C +G +++A +F+ M
Sbjct: 336 YNTIIDGMCKDKHVNDAFDLYSEKVSKRIFP-DVFTYNALISGFCIVGKLKDAIDLFNKM 394
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
T K P++ ++ +++GFCK G ++EAK + MM + +P+ +TY++++ G C+ V
Sbjct: 395 TSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEV 454
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
++A+ + M G NV ++ M+ G C + D+A+ + + + PDV +Y +
Sbjct: 455 NKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSL 514
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G CK G+ A+ L+ EM RG +P + ++N++ L + +D+AI LL ++
Sbjct: 515 IDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGI 574
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ +Y ++ GLC + G+++D + + ++ G+NLD Y+ +++G+C++G + +
Sbjct: 575 RPDMNTYTILVKGLCQS-GKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633
Query: 458 QIAHEM 463
+ +M
Sbjct: 634 ALLSKM 639
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 191/361 (52%), Gaps = 15/361 (4%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRV 171
+LKN + ++ IK + +G + A+ FH K I G L SY +L+ L +V
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALH-FHD-KVIAMGFHLDQVSYGTLINGLCKV 311
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK------PN 225
K A E + +V PDV Y T+I G CK + +A FD+ + K P+
Sbjct: 312 GETKAALELLRR-NDGKLVQPDVVMYNTIIDGMCKDKHVNDA---FDLYSEKVSKRIFPD 367
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+ YN +I+GFC G+L++A N+M ++ P+ T++ ++ G C +G + EAK ++A
Sbjct: 368 VFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLA 427
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
M K +V T+ S++ G C+V + ++A + + +V+SY ++INGFCKI
Sbjct: 428 MMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIK 487
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
DEA+ L KEM + + P V +++++ L ++G + A+ L+ +M P+ ++YN
Sbjct: 488 MVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYN 547
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+I+ LC K + L+ ++ G D Y+ L+KG C+ G +E+ ++ +++
Sbjct: 548 SILDALC-KKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLV 606
Query: 466 K 466
K
Sbjct: 607 K 607
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 168/312 (53%), Gaps = 5/312 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI + G +K AI F++ +Y+++ L+ + +IK A+
Sbjct: 369 FTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAM 428
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
++K+++ PDV TY++++ GYC + + A+ +F+ M+ V N+ +YN MINGFCK
Sbjct: 429 MMKQSI-KPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIK 487
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++EA K EM ++ P+ +TY+++I GLC +GR+ A L+ +M G + ++ T+
Sbjct: 488 MVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYN 547
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S+L LC D+A+ L + + PD+ +Y +++ G C+ GK ++A + +++ +
Sbjct: 548 SILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVK 607
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G V+++ + + + G D A+ LL +M + C+P+ +Y II L K
Sbjct: 608 GYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSL-FEKDENDM 666
Query: 421 VEDLVDRMIRSG 432
E L+ MI G
Sbjct: 667 AEKLLREMIMRG 678
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 137/257 (53%), Gaps = 4/257 (1%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
++ A ++K S K S L+ Y V A F+ A + SYN ++
Sbjct: 424 NVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGF 483
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PN 225
++ + A + F ++ + + P DV TY+++I G CK G I A ++ D M + P+
Sbjct: 484 CKIKMVDEAMKLFKEMHHKQIFP-DVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPD 542
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++ YN++++ CKK +++A + ++ +G RP+ TY ++ GLC +G++++A+ +
Sbjct: 543 IITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFE 602
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+ + G+ +V + M++G C G FD+A+ L + E PD K+YE++I +
Sbjct: 603 DLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKD 662
Query: 346 KSDEAISLLKEMRARGL 362
++D A LL+EM RGL
Sbjct: 663 ENDMAEKLLREMIMRGL 679
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 1/213 (0%)
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
+++ G P+ +T I G C+ G++ +A K+ GF + ++ +++ GLC VG
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ A+ LR + PDV Y +I+G CK ++A L E ++ + P VF++N
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
A+ G+L AI L +M + +P+ +++ ++ G C G +++ ++++ M++
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFC-KDGNIKEAKNVLAMMMK 431
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D YS L+ GYC V I + M
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTM 464
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 129/307 (42%), Gaps = 53/307 (17%)
Query: 177 AEEFFHQIVKENVVPPDVS---TYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMI 233
A F++++++N PPD+ ++++ ++ ++K+ + +K N L N +I
Sbjct: 94 AVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKM-EFKGIKLNFLNCNILI 152
Query: 234 NGFCKKGELEEAKKCMNEMMN-----RGC--RPNELTYNAMIYGLCI---NGRVDEAKML 283
N FC+ G + A + + + C R N + + + + I R+ L
Sbjct: 153 NSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFL 212
Query: 284 MAKMR--LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR-NVMEANMNPDVKSYEVVING 340
+++ L+ FK + HK+ +K C++ F+ ++ Y +++ PD + I G
Sbjct: 213 QSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKG 272
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
FC G+ +A+ ++ A G LD+
Sbjct: 273 FCLKGQIHQALHFHDKVIAMGF------------------HLDQ---------------- 298
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
VSY T+I GLC G + +L+ R D MY+ ++ G C++ +V + +
Sbjct: 299 -VSYGTLINGLCKV-GETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLY 356
Query: 461 HEMVTKK 467
E V+K+
Sbjct: 357 SEKVSKR 363
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 186/347 (53%), Gaps = 7/347 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQ-AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
+ KA G A+ +FH+ A + + S+NS+L V+++ A +F+ +
Sbjct: 130 IFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGA 189
Query: 188 NV--VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
N P++ TY +I+ CK+G I+ A F M +K P++ Y+T++NG CK+ +
Sbjct: 190 NSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRV 249
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+EA ++EM GC PN +T+N +I L NG + A L+ M L G N T+ ++
Sbjct: 250 DEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTL 309
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC+ GK D+A+ L ++ + P+ +Y +ING K ++++ + +L M RG
Sbjct: 310 IHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ 369
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
K + ++++ L + G+ + A+ L K+M + C PN V Y I GLC + + + E
Sbjct: 370 KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDE-KPDEAE 428
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
D++ M+ G + YS L+KG+ ++G+ + + + EM+++ R
Sbjct: 429 DILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMR 475
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 177/338 (52%), Gaps = 5/338 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IKA G + A+ F + +++Y++L+ L + + A ++ E
Sbjct: 204 IIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG 263
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+P V T+ +I K G + A K+ D M +K PN + YNT+I+G C KG+L++A
Sbjct: 264 CLPNPV-TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 322
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M++ C PN++TY +I GL R ++ ++ M G K N + S++ G
Sbjct: 323 LSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISG 382
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L GK + AV + + E P+V Y I+G C+ K DEA +L+EM ++G P
Sbjct: 383 LFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPN 442
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
F+++++ + + G+ +AIL+ K+M D N V + ++ GLC + GR+++ +
Sbjct: 443 AFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES-GRLREALTVW 501
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M+ G D YS ++KG C+ G+V+ +++ +EM
Sbjct: 502 THMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 539
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 9/248 (3%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y+++I G K G ENA +++ M KPN++ Y I+G C+ + +EA+ + EM+
Sbjct: 376 YSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 435
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
++G PN TY++++ G G +A ++ +M + NV +L GLC G+
Sbjct: 436 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 495
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK--PTVFSFNA 371
+A+ +++ + PDV +Y +I G C +G D+ + L EM+ + K P V ++N
Sbjct: 496 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 555
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD----VEDLVDR 427
+F L L RAI LL M C P+ ++ N + L QD +++LV R
Sbjct: 556 LFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVR 615
Query: 428 MIRSGHNL 435
+++ L
Sbjct: 616 LLKRERKL 623
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 211/415 (50%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y + L +H ++S A SL++
Sbjct: 3 FFTWLSSPANST--FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 61 IFETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++
Sbjct: 121 KYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D+A L +M
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G
Sbjct: 240 VKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLKP ++ + ++G+LD A K+M Q + + V Y +I
Sbjct: 300 QAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +G+ D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLC-REGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 194/371 (52%), Gaps = 7/371 (1%)
Query: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQ-AKQIENGACLYSYNS 163
H + + + + L++ + KA G A+ +FH+ A + + S+NS
Sbjct: 82 HFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNS 141
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
+L V+++ A +F+ + N P++ TY +I+ CK+G I+ A F M
Sbjct: 142 VLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMP 201
Query: 222 VK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+K P++ Y+T++NG CK+ ++EA ++EM GC PN +T+N +I L NG +
Sbjct: 202 LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS 261
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
A L+ M L G N T+ +++ GLC+ GK D+A+ L ++ + P+ +Y +I
Sbjct: 262 RAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTII 321
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG K ++++ + +L M RG K + ++++ L + G+ + A+ L K+M + C
Sbjct: 322 NGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCK 381
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
PN V Y I GLC + + + ED++ M+ G + YS L+KG+ ++G+ + +
Sbjct: 382 PNVVVYGAFIDGLCRDE-KPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAIL 440
Query: 459 IAHEMVTKKGR 469
+ EM+++ R
Sbjct: 441 VWKEMMSQDMR 451
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 177/338 (52%), Gaps = 5/338 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IKA G + A+ F + +++Y++L+ L + + A ++ E
Sbjct: 180 IIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG 239
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+P V T+ +I K G + A K+ D M +K PN + YNT+I+G C KG+L++A
Sbjct: 240 CLPNPV-TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 298
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M++ C PN++TY +I GL R ++ ++ M G K N + S++ G
Sbjct: 299 LSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISG 358
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L GK + AV + + E P+V Y I+G C+ K DEA +L+EM ++G P
Sbjct: 359 LFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPN 418
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
F+++++ + + G+ +AIL+ K+M D N V + ++ GLC + GR+++ +
Sbjct: 419 AFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES-GRLREALTVW 477
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M+ G D YS ++KG C+ G+V+ +++ +EM
Sbjct: 478 THMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 515
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 9/248 (3%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y+++I G K G ENA +++ M KPN++ Y I+G C+ + +EA+ + EM+
Sbjct: 352 YSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 411
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
++G PN TY++++ G G +A ++ +M + NV +L GLC G+
Sbjct: 412 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 471
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK--PTVFSFNA 371
+A+ +++ + PDV +Y +I G C +G D+ + L EM+ + K P V ++N
Sbjct: 472 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 531
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD----VEDLVDR 427
+F L L RAI LL M C P+ ++ N + L QD +++LV R
Sbjct: 532 LFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVR 591
Query: 428 MIRSGHNL 435
+++ L
Sbjct: 592 LLKRERKL 599
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 173/311 (55%), Gaps = 5/311 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L + + A F ++V NV+P D T+ ++ G CK GM+ A+ V +
Sbjct: 273 TYNTILHGFCSLGQLNEATRLFKEMVGRNVMP-DTVTFNILVDGLCKEGMVSEARCVSET 331
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT K PN YN +++G+C +++EA K + M+ +GC PN +YN +I G C + R
Sbjct: 332 MTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKR 391
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EAK L+++M + T+ ++++GLC VG+ +A+ + + + + PD+ +Y +
Sbjct: 392 MNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSI 451
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++GFCK G DEA+ LLKEM R +KP + + + R + G+L+ A L ++
Sbjct: 452 LLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADG 511
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ +YN +I GL + +G + + +M G D Y+ +++G+ + +
Sbjct: 512 IRPDIWTYNVMIKGL-LKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTA 570
Query: 457 MQIAHEMVTKK 467
+Q+ EMV K+
Sbjct: 571 IQLIDEMVGKR 581
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 193/394 (48%), Gaps = 40/394 (10%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+S+ + K + + LI + G +K A+ F++ + + SYN+++
Sbjct: 151 VSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVING 210
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
L + + +A F ++ ++N P+V TY T+I CK ++ A + M + P
Sbjct: 211 LCKNGNTIMAVRVFRKM-EQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 269
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+++ YNT+++GFC G+L EA + EM+ R P+ +T+N ++ GLC G V EA+ +
Sbjct: 270 DVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVS 329
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK- 343
M G + N T+ +++ G C+ + D+A+ L ++ P++ SY ++ING+CK
Sbjct: 330 ETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKS 389
Query: 344 ----------------------------------IGKSDEAISLLKEMRARGLKPTVFSF 369
+G+ EA++L KEM + GL P + ++
Sbjct: 390 KRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAY 449
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ + ++G LD A+ LLK+M + PN + Y +I G+ +A G+++ ++L ++
Sbjct: 450 SILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIA-GKLEVAKELFSKLS 508
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G D Y+ ++KG +EG + + +M
Sbjct: 509 ADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKM 542
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 39/314 (12%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAK 246
V +V + +I C++ ++ A V M ++P+ + +NT+ING C +G+++EA
Sbjct: 127 VTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAV 186
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
NEM+ G PN ++YN +I GLC NG A + KM N K NV T+ +++ L
Sbjct: 187 GLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSL 246
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR------ 360
C ++AV +L +++ + PDV +Y +++GFC +G+ +EA L KEM R
Sbjct: 247 CKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDT 306
Query: 361 -----------------------------GLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
G +P +++NA+ + ++D AI +L
Sbjct: 307 VTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGI 366
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M C PN SYN +I G C +K RM + + L+ M D YS L++G C+ G
Sbjct: 367 MIGKGCAPNLSSYNILINGYCKSK-RMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG 425
Query: 452 NVENVMQIAHEMVT 465
+ + EM +
Sbjct: 426 RPREALNLFKEMCS 439
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++L+ L +V + A F ++ ++P D+ Y+ ++ G+CK G ++ A K+
Sbjct: 413 TYSTLMQGLCQVGRPREALNLFKEMCSSGLLP-DLMAYSILLDGFCKHGHLDEALKLLKE 471
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KPN++ Y +I G G+LE AK+ +++ G RP+ TYN MI GL G
Sbjct: 472 MHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGL 531
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
DEA KM +GF PD SY V
Sbjct: 532 SDEAYEFFRKMEDDGFL-----------------------------------PDSCSYNV 556
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+I GF + S AI L+ EM + +F + +
Sbjct: 557 IIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDL 595
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
GF N S S+ D A+ ++ N P V + + K + A
Sbjct: 66 GFGSNTSNDISI----------DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSA 115
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+SL +M G+ V+S N + L +D A+ ++ +M ++ P+ +++NT+I G
Sbjct: 116 VSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLING 175
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
LC +G++++ L + M+ SGH + Y+ ++ G C+ GN +++ +M +G+
Sbjct: 176 LC-NEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGK 233
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 204/417 (48%), Gaps = 40/417 (9%)
Query: 76 NWASN-PNPNPNKYHHTTPCYTAITDVLLSH--------------------SLISIAASL 114
NW S+ P + HT+ Y A+ + L +H S S+ A++
Sbjct: 89 NWLSSIPT-----FRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAI 143
Query: 115 LKNSN-KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK----QIENGACLYSYNSLLGVLV 169
L + + S+F L+ AY D G V AI F + QI C Y LL ++
Sbjct: 144 LDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGY----LLDKMI 199
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNL 226
NS F+ +I+ E PP V Y +I +CK G I +AK +F+ + ++P
Sbjct: 200 NSNSPVTIWTFYSEIL-EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTT 258
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
+++NT+ING CK L+E + M P+ TY+ +I+GLC GR+D A+ L +
Sbjct: 259 VSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDE 318
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M+ G + N T +++ G + D A+ ++ + PD+ Y ++NG CK+G
Sbjct: 319 MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
++A L+ EM+ G+KP ++ + + G+L+ A+ + K M + + + V++
Sbjct: 379 VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I G C GR++D E + M+ +G D Y+ ++ GYC++GNV+ ++ EM
Sbjct: 439 LISGFC-RDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 179/359 (49%), Gaps = 47/359 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FHQIVKE 187
LI + G+++ A F++ ++ S+N+L+ L + S L E F + ++E
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK--SRNLDEGFRLKKTMEE 286
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFD----------------------------- 218
N + PDV TY+ +I G CK G ++ A+++FD
Sbjct: 287 NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDS 346
Query: 219 ---------VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
M VKP+L+ YNT++NG CK G++ +A+K ++EM G +P+++TY +I
Sbjct: 347 AMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLID 406
Query: 270 GLCINGRVDEAKMLMAKMRLNGFK-DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
G C G ++ A + M G DNV+ +++ G C G+ A LR ++EA M
Sbjct: 407 GYCKEGDLESAMEIRKGMNEEGVVLDNVA-FTALISGFCRDGRVRDAERTLREMVEAGMK 465
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PD +Y +VI+G+CK G LLKEM+ G KP V ++N + L + G++ A +L
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L+ M + P+ ++YN ++ G C + EDL+ G +D+ Y+ L+ Y
Sbjct: 526 LEAMLNLGVTPDDITYNILLEGHC----KNGKAEDLLKLRNEKGLIVDYAYYTSLVSEY 580
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 9/272 (3%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ T+ + YC M +A ++F L +KG+ A +
Sbjct: 94 IPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLV--------SRKGKDSAASVFAAILD 145
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G R + ++A++ +G V +A +R + F+ +L +
Sbjct: 146 TAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPV 205
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ ++E P V+ Y ++IN FCK G +A + E+R RGL+PT SFN +
Sbjct: 206 TIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLI 265
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L ++ LD L K M + P+ +Y+ +I GLC +GR+ E L D M + G
Sbjct: 266 NGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLC-KEGRLDVAEQLFDEMQQRGL 324
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ ++ L+ G +++ M H+M+T
Sbjct: 325 RPNGITFTALIDGQYRSRRMDSAMNTYHQMLT 356
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
K D + +I Y +GNVK + + + + +YN L+ L + +K A
Sbjct: 465 KPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANM 524
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCK 238
++ V P D+ TY ++ G+CK G E+ K+ + + + Y ++++ + K
Sbjct: 525 LLEAMLNLGVTPDDI-TYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTSLVSEYNK 582
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 176/338 (52%), Gaps = 5/338 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A+ G + A+ F + + + YN++ VLV I LA ++++V
Sbjct: 150 LVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSG 209
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+P + +TY ++ G CK GM +A K+FD M + P++ Y +++ C +G +E+A
Sbjct: 210 CLP-NSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDA 268
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + M GC P+E+TY + GLC GRVDEA ++ GF + + ++ G
Sbjct: 269 GRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDG 328
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L G+FD+ + Y ++ +++PD+ Y ++I F + G++ +A LL EM+ +G P
Sbjct: 329 LFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPD 388
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
F +N + + L + G +DRA L+ +M Q + + + ++N +ICGLC KG + +
Sbjct: 389 TFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLC-KKGLIDKAMQVF 447
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D M G + Y+ L+ G G +E + H+M
Sbjct: 448 DEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM 485
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 163/357 (45%), Gaps = 64/357 (17%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGA---CLYSYNSLLGVLVRVNSIKLAEEFF 181
F+S L KA G V A FH+ + +++G L Y+ L+ L + ++
Sbjct: 290 FLSGLCKA----GRVDEA---FHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYY 342
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNT------- 231
+++ +++ PD++ YT +IR + + G ++A + D M K P+ YNT
Sbjct: 343 TEMLGKSI-SPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFD 401
Query: 232 ----------------------------MINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
MI G CKKG +++A + +EM GC P +T
Sbjct: 402 VGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMT 461
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRL--------------NGFKDNVSTHKSMLKGLCVV 309
YNA+I GL G ++EA+ML KM + N +D S K ++ G+C
Sbjct: 462 YNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRK-LVDGMCQS 520
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G+ +A LR ++E+ + PDV +Y +ING CK D A+ L KE++ +G+ P ++
Sbjct: 521 GQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITY 580
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+ L + A +L + + + P+ YNT++ LC K Q + +D
Sbjct: 581 GTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLD 637
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 1/239 (0%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
A+ ++ G +EA + + M + CRP YNA+ L G + A L +M
Sbjct: 146 AFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRM 205
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+G N +T+ ++ GLC G A+ ++E + PDVK Y V+++ C G+
Sbjct: 206 VSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRI 265
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
++A LL M+ G P ++ L + G +D A + + + Y+ +
Sbjct: 266 EDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCL 325
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
I GL A GR + M+ + D T+Y+ L++ + E G ++ + EM K
Sbjct: 326 IDGLFQA-GRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDK 383
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 168/403 (41%), Gaps = 62/403 (15%)
Query: 92 TPCYTAITDVLLSHSLISIAASL----LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
T CY + L I A SL L+N+ L + +I +G + A+ F
Sbjct: 389 TFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFD 448
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI-------------VKENVVPPDV 194
+ + + +YN+L+ L R ++ A FH++ + N V D
Sbjct: 449 EMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQV-RDT 507
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
+ ++ G C+ G + A K+ + V P+++ YNT+ING CK L+ A + E
Sbjct: 508 ESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKE 567
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
+ +G P+E+TY +I GL R ++A ML + +G ++ + +M++ LC + K
Sbjct: 568 LQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKK 627
Query: 312 FDQAV-----------------------------GYLRNVME---------ANMNPDVKS 333
QA+ G+L ++ ++NP+
Sbjct: 628 LSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPN--P 685
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y + + G C++ K D+A+ + + G+ T + L + L+ A+ ++
Sbjct: 686 YTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTL 745
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ + N ++ LC+ + R D + L RM G+++D
Sbjct: 746 SKRFIVSQPVGNRLLRSLCI-RYRRHDAQALSWRMHLVGYDMD 787
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
V FD L + A + ++ ++ G+ EA+ M +PT F
Sbjct: 125 AVAMFDA----LADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAF 180
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+NAVF++LV+ G + A+ L +M CLPN +Y ++ GLC +G D + D
Sbjct: 181 VYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLC-KRGMAVDALKMFDE 239
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M+ G D +Y+ LL C EG +E+ ++ M
Sbjct: 240 MLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSM 275
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 174/345 (50%), Gaps = 38/345 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP--------------------------- 191
Y Y S++G+L R+ + AEE F +++++ ++P
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 192 -------PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
PDV TYT +I G+C++G + A K+F M K P+ + + +ING+CK G
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+++A + N M+ GC PN +TY +I GLC G +D A L+ +M G + N+ T+ S
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GLC G ++AV + A +N D +Y +++ +CK G+ D+A +LKEM +G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+PT+ +FN + +G L+ LL M PN ++N+++ C+ + ++
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI-RNNLKAA 615
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M G D Y L+KG+C+ N++ + EM K
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 162/319 (50%), Gaps = 7/319 (2%)
Query: 153 ENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
E G C + SYN ++ + ++ IK A +++ PDV +Y+T++ GYC+ G +
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLL-LLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ K+ +VM +KPN Y ++I C+ +L EA++ +EM+ +G P+ + Y +
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C G + A +M +V T+ +++ G C +G +A + +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD ++ +ING+CK G +A + M G P V ++ + L + G+LD A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LL +M ++ PN +YN+I+ GLC + G +++ LV +G N D Y+ L+ Y
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKS-GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 448 CEEGNVENVMQIAHEMVTK 466
C+ G ++ +I EM+ K
Sbjct: 537 CKSGEMDKAQEILKEMLGK 555
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 141/270 (52%), Gaps = 4/270 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
++LI Y G++K A + Q + +Y +L+ L + + A E H++
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGEL 242
K + P++ TY +++ G CK G IE A K+ F+ + + + Y T+++ +CK GE+
Sbjct: 484 KIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A++ + EM+ +G +P +T+N ++ G C++G +++ + L+ M G N +T S+
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+K C+ A +++ + PD K+YE ++ G CK EA L +EM+ +G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQM 392
+V +++ + + ++ + A + QM
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 123/248 (49%), Gaps = 6/248 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI G++ +A H+ +I +++YNS++ L + +I+ A + +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ D TYTT++ YCK G ++ A+++ M ++P ++ +N ++NGFC G LE
Sbjct: 520 AGL-NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+ +K +N M+ +G PN T+N+++ CI + A + M G + T+++++
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
KG C +A + + + V +Y V+I GF K K EA + +MR GL
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Query: 364 P--TVFSF 369
+F F
Sbjct: 699 ADKEIFDF 706
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
Query: 275 GRVDEAKMLMAKMRLNGFK---DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
G + EA+ + KM G D+ + + + L C K A+ R E + +V
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--KTATAIIVFREFPEVGVCWNV 246
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
SY +VI+ C++G+ EA LL M +G P V S++ V GELD+ L++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + PN Y +II LC ++ + E+ MIR G D +Y+ L+ G+C+ G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRI-CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 452 NVENVMQIAHEMVTK 466
++ + +EM ++
Sbjct: 366 DIRAASKFFYEMHSR 380
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 210/415 (50%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P+ + + HT Y + L +H + S A SL++
Sbjct: 3 FFTWLSSPSNST--FRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++
Sbjct: 121 KYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D+A L +M
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLKP ++ + + G+LD A K+M Q + + V+Y +I
Sbjct: 300 QANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLC-QEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEM 413
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 176/326 (53%), Gaps = 15/326 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ L+ K A Q+ N PP++ T+ +I+G CK G IE A +V D
Sbjct: 138 TYNTLVNALLGQGRSKEAFSLLEQMAA-NGCPPELITFGLIIKGLCKEGEIEAAFRVVDE 196
Query: 220 M-----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + P+++ +N++++G CK+ + +A + RGCRPN +TY+ +I GL
Sbjct: 197 MFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKM 256
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
++DEA L+AKM G + N T+ +++ GL VG+ + AV LR + +A PD +Y
Sbjct: 257 AKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY 316
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+GF K + EA+ LL+EM G P+V ++ + L +G D A+ +L M
Sbjct: 317 NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 376
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR----SGHNLDFTMYSCLLKGYCEE 450
C PN ++Y++I+ GLC A GR+ + ++M R + H + YS L+ G C+
Sbjct: 377 RGCAPNAITYSSIVDGLCKA-GRVTEALGYFEKMARDEVVAPHVI---AYSALIDGLCKA 432
Query: 451 GNVENVMQIAHEMVTKKGRLLKLKNF 476
G ++ + M+ + GR+ + F
Sbjct: 433 GKIDEAYEFLERMI-RAGRIPDVVTF 457
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 178/333 (53%), Gaps = 8/333 (2%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
V AI F Q + +Y +L+ L + +K A + F + + P V TY
Sbjct: 10 KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEE-ARAKGCHPTVVTY 68
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTV----KPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
TMI G CK G IENA ++D M + +P ++ Y+T+I+G C+ E+++ K + EM
Sbjct: 69 NTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMA 128
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RGC PN +TYN ++ L GR EA L+ +M NG + T ++KGLC G+ +
Sbjct: 129 GRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIE 188
Query: 314 QAVGYLRN--VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
A + ++E+ ++PDV ++ V++G CK + +A ++ K RG +P V +++
Sbjct: 189 AAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST 248
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L + ++D A+ LL +M ++ C N V+Y+T++ GL + GRM+D ++ +M +
Sbjct: 249 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL-LKVGRMEDAVVVLRQMRDA 307
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G D Y+ L+ G+ + + + + EM+
Sbjct: 308 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREML 340
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 191/346 (55%), Gaps = 12/346 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQI- 184
L+ A +G K A F +Q+ C L ++ ++ L + I+ A ++
Sbjct: 142 LVNALLGQGRSKEA---FSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMF 198
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGE 241
+ E+ + PDV T+ +++ G CK I +A VF +PN++ Y+T+I+G K +
Sbjct: 199 MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAK 258
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++EA + + +M+ GCR N +TY+ ++ GL GR+++A +++ +MR G + T+ +
Sbjct: 259 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 318
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G + +AVG LR ++EA +P V +Y + +G C+ G+ DEA+ +L M ARG
Sbjct: 319 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 378
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL-PNFVSYNTIICGLCMAKGRMQD 420
P +++++ L + G + A+ ++M + + + P+ ++Y+ +I GLC A G++ +
Sbjct: 379 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKA-GKIDE 437
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ ++RMIR+G D +S L+ G C+ G ++ +++ M +
Sbjct: 438 AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAER 483
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 139/269 (51%), Gaps = 7/269 (2%)
Query: 149 AKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
AK +E G A +Y++++ L++V ++ A Q+ ++ PD TY T+I G+ K
Sbjct: 267 AKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQM-RDAGCLPDAVTYNTLIDGFFK 325
Query: 207 MGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+ A + M P+++ Y T+ +G C+ G +EA + ++ M RGC PN +T
Sbjct: 326 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 385
Query: 264 YNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
Y++++ GLC GRV EA KM R +V + +++ GLC GK D+A +L +
Sbjct: 386 YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERM 445
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ A PDV ++ ++ING C G+ D + L + M RG P + ++ + L +
Sbjct: 446 IRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRV 505
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGL 411
D A L +QM P+ + T+I GL
Sbjct: 506 DEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 142/271 (52%), Gaps = 7/271 (2%)
Query: 200 MIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
MI G CK ++ A +F M K P+++ Y +I+G K+ ++EA E +G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN-GFKDNVSTHKSMLKGLCVVGKFDQA 315
C P +TYN MI GLC GR++ A L M ++ GF+ V T+ +++ GLC + D+
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
L + P+ +Y ++N G+S EA SLL++M A G P + +F + +
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 376 LVENGELDRAILLLKQMPQMDC--LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L + GE++ A ++ +M ++ P+ +++N+++ GLC + R+ D ++ R + G
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQ-RILDAHNVFKRALERGC 239
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ YS L+ G + ++ +Q+ +MV
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMV 270
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 129/273 (47%), Gaps = 9/273 (3%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFH 147
T Y+ + D LL + A +L+ ++ L D + LI + R ++ A+
Sbjct: 278 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 337
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ + + +Y +L L R A E + P + TY++++ G CK
Sbjct: 338 EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAI-TYSSIVDGLCKA 396
Query: 208 GMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G + A F+ M V P+++AY+ +I+G CK G+++EA + + M+ G P+ +T
Sbjct: 397 GRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVT 456
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
++ +I GLC GR+D L M G ++ T+ +++ LC + D+A + +
Sbjct: 457 FSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMR 516
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
++PD + +I+G ++ + ++A + E
Sbjct: 517 SDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L ++ ++D+AI L KQM P+ V+Y +I GL + R+++ DL + G +
Sbjct: 5 LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQR-RVKEAYDLFEEARAKGCHP 63
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
Y+ ++ G C+ G +EN + + +M G
Sbjct: 64 TVVTYNTMIDGLCKCGRIENALTLYDDMAIHFG 96
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 205/414 (49%), Gaps = 28/414 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN---------------------SNK 120
+P + HT Y + L +H + A SL++ +
Sbjct: 3 SPTNSTVRHTLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI F K+ + ++L L++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + ++ +CK G + A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYKEIL-ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC R+DEA L +M NG N
Sbjct: 182 IKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ R ++ +PDV +Y +I G CK G +A LL E
Sbjct: 242 VTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A L ++M + + V Y +I GLC +G
Sbjct: 302 MSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
R D E ++ M+R G D Y+ ++ +C++G+V+ ++ EM + GR+
Sbjct: 361 RAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREM-QRNGRV 413
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 147/284 (51%), Gaps = 6/284 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G ++ A F + + S+N+L+ +++ L E F
Sbjct: 137 YFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD--LDEGFRLK 194
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKK 239
++ + V PDV TY+ +I G CK ++ A +F M + PN + + T+I+G CK
Sbjct: 195 NAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKN 254
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G L+ A +M+N+G P+ +TYN +IYGLC G + +A+ L+ +M G K + T+
Sbjct: 255 GRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITY 314
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G + A +++ ++ D Y +I G C+ G++ +A +L+EM
Sbjct: 315 TTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLR 374
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GLKP ++ + + G++ +A LL++M + +P V+
Sbjct: 375 VGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 223/448 (49%), Gaps = 23/448 (5%)
Query: 24 ITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNP 83
+ S++ + P P+ +PL F L NI+T VI ++ N FF WAS
Sbjct: 37 VISILAKKKPIEPAL-----EPLVPF---LSKNIITSVIKDEVNRQLGFRFFIWASR--- 85
Query: 84 NPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK----LSDFFISKLIKAYGDRGNV 139
+ + + + D+L + + L+ + + LI AY G
Sbjct: 86 --RERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMA 143
Query: 140 KAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSI-KLAEEFFHQIVKENVVPPDVSTYT 198
+ A+ F + K+ + +++YN +L V++R LA +++++K N P++ T+
Sbjct: 144 EKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNC-SPNLYTFG 202
Query: 199 TMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
++ G K G +A+K+FD MT + PN + Y +I+G C++G ++A+K EM
Sbjct: 203 ILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTS 262
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G P+ + +NA++ G C GR+ EA L+ +GF + + S++ GL ++ QA
Sbjct: 263 GNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQA 322
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
N+++ N+ PD+ Y ++I G K GK ++A+ LL M ++G+ P + +NAV +
Sbjct: 323 FELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKA 382
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L G L+ L +M + + P+ ++ +IC +C G +++ E++ + +SG +
Sbjct: 383 LCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC-RNGLVREAEEIFTEIEKSGCSP 441
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ L+ G C+ G ++ + H+M
Sbjct: 442 SVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 157/341 (46%), Gaps = 11/341 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI RG+ A F++ + N ++N+LL ++ + A E K+
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
V + Y+++I G + A +++ M +KP+++ Y +I G K G++E+A
Sbjct: 299 FVL-GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K ++ M ++G P+ YNA+I LC G ++E + L +M + TH ++
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICS 417
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+C G +A + ++ +P V ++ +I+G CK G+ EA LL +M G +
Sbjct: 418 MCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV-GRPAS 476
Query: 366 VF-----SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+F S N F +VE+G + +A L P+ VSYN +I G C A G +
Sbjct: 477 LFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA-GDIDG 535
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
L++ + G + D Y+ L+ G G E ++ +
Sbjct: 536 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFY 576
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 165/387 (42%), Gaps = 85/387 (21%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IKA RG ++ + + E+ ++ L+ + R ++ AEE F +I K
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAK-----------------------KVFDVMT---- 221
P V+T+ +I G CK G ++ A+ + FD M
Sbjct: 439 C-SPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGS 497
Query: 222 ---------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
P++++YN +INGFC+ G+++ A K +N + +G P+ +TYN
Sbjct: 498 ILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNT 557
Query: 267 MIYGLCINGRVDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLC----VVGKFDQAVGY--- 318
+I GL GR +EA K+ AK + F+ + + ++S++ C V+ F+ + Y
Sbjct: 558 LINGLHRVGREEEAFKLFYAK---DDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKK 614
Query: 319 ------------------------LRNVMEANMNPD---VKSYEVVINGFCKIGKSDEAI 351
LR ++E + D + Y + + G C+ G+ EA+
Sbjct: 615 ISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEAL 674
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI--LLLKQMPQMDCLPNFVSYNTIIC 409
+ +R + + T S + L + +LD AI L +P +Y ++
Sbjct: 675 MVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNY--LLS 732
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLD 436
L + +M+ V L +RM R+G+N+D
Sbjct: 733 SLLESTEKMEIVSQLTNRMERAGYNVD 759
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV- 377
L + ++ D + V+I+ + K+G +++A+ M+ +P VF++N + R+++
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
E A + +M + +C PN ++ ++ GL KGR D + + D M G + +
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGL-YKKGRTSDAQKMFDDMTGRGISPNR 233
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVT 465
Y+ L+ G C+ G+ ++ ++ +EM T
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQT 261
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 199/431 (46%), Gaps = 58/431 (13%)
Query: 78 ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSD----FFISKLIKAY 133
AS+PNP + L++ ++ AA L+ + + + +KLI+
Sbjct: 40 ASSPNPANARLRR-----------LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNL 88
Query: 134 GDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
RG A A++ +++YN+L+ R + A +++ V PD
Sbjct: 89 CRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA----RRLIASMPVAPD 144
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
TYT +IRG C G + A + D M +P+++ Y ++ CK +A + ++
Sbjct: 145 AYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 204
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
EM +GC PN +TYN +I G+C GRVD+A+ + ++ GF+ + ++ ++LKGLC
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYE----------------------------------- 335
+++ +ME N P+ +++
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 324
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+VIN CK G+ D+A L M + G P S+ V + L + A LLK+M +
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+C PN V++NT IC LC KG ++ L+++M G ++ Y+ L+ G+C +G V++
Sbjct: 385 NCPPNEVTFNTFICILCQ-KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443
Query: 456 VMQIAHEMVTK 466
+++ + M K
Sbjct: 444 ALELFYSMPCK 454
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 170/346 (49%), Gaps = 8/346 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + +I+ DRG V A+ + +Y LL + + A E +
Sbjct: 146 YTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDE 205
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ + P ++ TY +I G C+ G +++A++ + ++ +P+ ++Y T++ G C
Sbjct: 206 MRAKGCTP-NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
E+ ++ EMM + C PNE+T++ ++ C G V+ A ++ +M +G N +
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 324
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ +C G+ D A +L N+ +PD SY V+ G C+ + ++A LLKEM +
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
P +FN IL + G +++A +L++QM + C N V+YN ++ G C+ +GR+
Sbjct: 385 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCV-QGRVDS 443
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L M + + +T LL G C ++ ++ EM+ K
Sbjct: 444 ALELFYSMPCKPNTITYTT---LLTGLCNAERLDAAAELLAEMLQK 486
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 141/273 (51%), Gaps = 2/273 (0%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+ + +L + I+ A Q+ E+ ++ TY ++ G+C G +++A ++F
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQM-SEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 450
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M KPN + Y T++ G C L+ A + + EM+ + C PN +T+N ++ C G +DE
Sbjct: 451 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 510
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L+ +M +G N+ T+ ++L G+ ++A+ L ++ ++PD+ +Y +I
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 570
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
+ + +EAI + ++ G++P +N + L + D AI M C+P
Sbjct: 571 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMP 630
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
N ++Y T+I GL + +++ DL+ + G
Sbjct: 631 NELTYITLIEGL-ANEDFLKETRDLLRELCSRG 662
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 115/237 (48%), Gaps = 7/237 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + +G V +A+ F+ N +Y +LL L + A E ++++++
Sbjct: 431 LVNGFCVQGRVDSALELFYSMPCKPN---TITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P +V T+ ++ +C+ G+++ A ++ + M PNL+ YNT+++G EEA
Sbjct: 488 CAP-NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEA 546
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ +++ G P+ +TY+++I L RV+EA + ++ G + + +L
Sbjct: 547 LELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLA 606
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
LC D A+ + ++ P+ +Y +I G E LL+E+ +RG+
Sbjct: 607 LCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 199/431 (46%), Gaps = 58/431 (13%)
Query: 78 ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSD----FFISKLIKAY 133
AS+PNP + L++ ++ AA L+ + + + +KLI+
Sbjct: 40 ASSPNPANARLRR-----------LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNL 88
Query: 134 GDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
RG A A++ +++YN+L+ R + A +++ V PD
Sbjct: 89 CRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA----RRLIASMPVAPD 144
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
TYT +IRG C G + A + D M +P+++ Y ++ CK +A + ++
Sbjct: 145 AYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 204
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
EM +GC PN +TYN +I G+C GRVD+A+ + ++ GF+ + ++ ++LKGLC
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYE----------------------------------- 335
+++ +ME N P+ +++
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 324
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+VIN CK G+ D+A L M + G P S+ V + L + A LLK+M +
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+C PN V++NT IC LC KG ++ L+++M G ++ Y+ L+ G+C +G V++
Sbjct: 385 NCPPNEVTFNTFICILCQ-KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443
Query: 456 VMQIAHEMVTK 466
+++ + M K
Sbjct: 444 ALELFYSMPCK 454
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 170/346 (49%), Gaps = 8/346 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + +I+ DRG V A+ + +Y LL + + A E +
Sbjct: 146 YTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDE 205
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ + P ++ TY +I G C+ G +++A++ + ++ +P+ ++Y T++ G C
Sbjct: 206 MRAKGCTP-NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
E+ ++ EMM + C PNE+T++ ++ C G V+ A ++ +M +G N +
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 324
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ +C G+ D A +L N+ +PD SY V+ G C+ + ++A LLKEM +
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
P +FN IL + G +++A +L++QM + C N V+YN ++ G C+ +GR+
Sbjct: 385 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCV-QGRVDS 443
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L M + + +T LL G C ++ ++ EM+ K
Sbjct: 444 ALELFYSMPCKPNTITYTT---LLTGLCNAERLDAAAELLAEMLQK 486
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 141/273 (51%), Gaps = 2/273 (0%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+ + +L + I+ A Q+ E+ ++ TY ++ G+C G +++A ++F
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQM-SEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 450
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M KPN + Y T++ G C L+ A + + EM+ + C PN +T+N ++ C G +DE
Sbjct: 451 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 510
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L+ +M +G N+ T+ ++L G+ ++A+ L ++ ++PD+ +Y +I
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 570
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
+ + +EAI + ++ G++P +N + L + D AI M C+P
Sbjct: 571 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMP 630
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
N ++Y T+I GL + +++ DL+ + G
Sbjct: 631 NELTYITLIEGL-ANEDFLKETRDLLRELCSRG 662
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 116/237 (48%), Gaps = 7/237 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + +G V +A+ F+ N +Y +LL L + A E ++++++
Sbjct: 431 LVNGFCVQGRVDSALELFYSMPCKPN---TITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P +V T+ ++ +C+ G+++ A ++ + M PNL+ YNT+++G K EEA
Sbjct: 488 CAP-NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEA 546
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ +++ G P+ +TY+++I L RV+EA + ++ G + + +L
Sbjct: 547 LELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLA 606
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
LC D A+ + ++ P+ +Y +I G E LL+E+ +RG+
Sbjct: 607 LCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 186/344 (54%), Gaps = 5/344 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ S LI+AY ++++A + ++ + +YN+L+G L R +I+ A + +
Sbjct: 244 YTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKE 303
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ +VP D TY +I G CK G + AK + D M+ + PN++ Y+T+I+GF ++G
Sbjct: 304 MEDYGLVP-DGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQG 362
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+EA K + EM G +PN++TY+ +I GLC GR+ A ++ +M G+ + T+
Sbjct: 363 NADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYN 422
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++G ++A L + + ++P+V +Y ++ING C+IG+S+ A LL++M A
Sbjct: 423 LVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIAD 482
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GLKP F + + G A LK+M + + P+ YN++I GL G+M +
Sbjct: 483 GLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNV-GKMDE 541
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ D M+ G + Y L+ GY GN+E Q+ H+M+
Sbjct: 542 AIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQML 585
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 144/266 (54%), Gaps = 4/266 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAK 246
+ PDV TY+T+I YCK+ +E+AKKV + M N++ YNT+I G C+ G +EEA
Sbjct: 239 ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF 298
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
EM + G P+ TY A+I GLC GR D+AK L+ +M G NV + +++ G
Sbjct: 299 GYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGF 358
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
G D+A ++ + A + P+ +Y+ +I G CK+G+ A +LK+M G
Sbjct: 359 MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADT 418
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++N V + + A LLL +M + PN +Y+ II GLC G + L++
Sbjct: 419 MTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQI-GESERASGLLE 477
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGN 452
+MI G + +Y+ L+ GYC EG+
Sbjct: 478 QMIADGLKPNAFVYAPLISGYCREGS 503
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 173/341 (50%), Gaps = 5/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I+ + + N + A ++ ++ +Y+Y+ ++ L ++ + A Q++ +
Sbjct: 424 VIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADG 483
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P+ Y +I GYC+ G A + MT + P+L YN++I G G+++EA
Sbjct: 484 L-KPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEA 542
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +EM+ +G +PN+ TY +I+G + G +++A+ L+ +M +G N + +L+G
Sbjct: 543 IEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEG 602
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
++ L++++E + PD + Y +VI+ G A+S+L + GL P
Sbjct: 603 YFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPD 662
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ ++ + ++++A+ LL +M + P YN +I G C + + ++
Sbjct: 663 SLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSD-DISHARNIF 721
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +I G + Y+ L+ GYC+ G++ + + + +EM+T+
Sbjct: 722 NSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTE 762
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 136/247 (55%), Gaps = 7/247 (2%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
+ P++ Y+T+I +CK +LE AKK + EM GC N +TYN +I GLC G ++EA
Sbjct: 239 ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF 298
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+M G + T+ +++ GLC G+ DQA L + A + P+V Y +I+GF
Sbjct: 299 GYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGF 358
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
+ G +DEA ++KEM A G++P +++ + R L + G + RA +LKQM ++ + +
Sbjct: 359 MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADT 418
Query: 402 VSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
++YN +I G R + E+ L++ M + G + + YS ++ G C+ G E
Sbjct: 419 MTYNLVIEGHL----RQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASG 474
Query: 459 IAHEMVT 465
+ +M+
Sbjct: 475 LLEQMIA 481
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 192/433 (44%), Gaps = 9/433 (2%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
N+V + Q N A N +PN Y ++ + + S + ++
Sbjct: 422 NLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSI-IINGLCQIGESERASGLLEQMI 480
Query: 116 KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK 175
+ K + F + LI Y G+ A + + LY YNSL+ L V +
Sbjct: 481 ADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMD 540
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTM 232
A E++ +++++ P D TY +I GY G +E A+++ M + PN Y +
Sbjct: 541 EAIEYYDEMLEKGFQPNDF-TYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQI 599
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+ G+ K LE+ + M+ +G P+ Y +I+ L +G + A +++ + NG
Sbjct: 600 LEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGL 659
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ + S++ G C ++AVG L + + + P + Y +I+GFCK A +
Sbjct: 660 VPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARN 719
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+ + +GL P ++ + + G++ AI L +M P+ Y+ + G C
Sbjct: 720 IFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAG-C 778
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK--GRL 470
G +Q + + MI G+ + + ++ L+ G+C+ G ++ ++ H M+ K L
Sbjct: 779 SNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSL 837
Query: 471 LKLKNFLTRVVDA 483
L ++N + + +A
Sbjct: 838 LTVENIVIGLGEA 850
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 153/347 (44%), Gaps = 46/347 (13%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKE---NVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
Y++L+ +R + A+E F +IVKE V P+ TY +IRG CK+G + A ++
Sbjct: 351 YSTLIDGFMRQGN---ADEAF-KIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRIL 406
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
MT + + YN +I G ++ EEA +NEM G PN TY+ +I GLC
Sbjct: 407 KQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQI 466
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + A L+ +M +G K N + ++ G C G F A L+ + N+ PD+ Y
Sbjct: 467 GESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCY 526
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G +GK DEAI EM +G +P F++ + G L++A LL QM
Sbjct: 527 NSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLN 586
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG------------HNL------- 435
PN Y I+ G ++ V + M+ G HNL
Sbjct: 587 SGLNPNDFIYAQILEGY-FKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQ 645
Query: 436 ----------------DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D +Y L+ G+C+ ++E + + EM K
Sbjct: 646 AAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKK 692
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 136/272 (50%), Gaps = 6/272 (2%)
Query: 200 MIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
++ Y K G + + +V +M + P+L N ++ + L+ K M G
Sbjct: 179 LVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAG 238
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
P+ TY+ +I C ++ AK ++ +MR G NV T+ +++ GLC G ++A
Sbjct: 239 ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF 298
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
GY + + + + PD +Y +ING CK G+ D+A LL EM GL P V ++ +
Sbjct: 299 GYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGF 358
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ G D A ++K+M PN ++Y+ +I GLC GRM ++ +M + G+ D
Sbjct: 359 MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKL-GRMGRASRILKQMTKIGYMAD 417
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
Y+ +++G+ + N E + +EM +KG
Sbjct: 418 TMTYNLVIEGHLRQHNKEEAFLLLNEM--RKG 447
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 135/290 (46%), Gaps = 24/290 (8%)
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
++++N + PD Y ++I G+CK +E A + D M ++P + YN +I+GFCK
Sbjct: 653 VIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSD 712
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++ A+ N ++ +G PN +TY +I G C G + +A L +M G + +
Sbjct: 713 DISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYS 772
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+ G G QA+ ++ M A + S+ +++GFCK GK E + L M +
Sbjct: 773 VLAAGCSNSGDLQQAL-FITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDK 831
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+ P++ + + L E G+L A + ++ Q + A R D
Sbjct: 832 DIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKN-----------------ASHRDTD 874
Query: 421 -VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+ L MI G + + +++ +C++G ++ + + H+ + KGR
Sbjct: 875 HLSSLFTDMINQGL-VPLDVIHNMIQSHCKQGYLDKALML-HDALVAKGR 922
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 111/239 (46%), Gaps = 2/239 (0%)
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+ +++ + K G + + + + M + G P+ N ++ L +D + M
Sbjct: 177 DVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEG 236
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G +V T+ ++++ C V + A + + E + +V +Y +I G C+ G +E
Sbjct: 237 AGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEE 296
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A KEM GL P F++ A+ L + G D+A LL +M +PN V Y+T+I
Sbjct: 297 AFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLID 356
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
G M +G + +V M +G + Y L++G C+ G + +I +M TK G
Sbjct: 357 GF-MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQM-TKIG 413
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 125/296 (42%), Gaps = 58/296 (19%)
Query: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQ--AKQIENGACLYSYN 162
+ +S+ + + KN LI + +++ A+ + K IE G + YN
Sbjct: 645 QAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPG--ISCYN 702
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM-- 220
+L+ + + I A F+ I+ + + PP+ TYTT+I GYCK G I +A +++ M
Sbjct: 703 ALIDGFCKSDDISHARNIFNSIICKGL-PPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLT 761
Query: 221 -TVKPNLLAY----------------------------------NTMINGFCKKGELEEA 245
V P+ Y NT+++GFCK+G+L+E
Sbjct: 762 EGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQET 821
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K ++ MM++ P+ LT ++ GL G++ EA + +++ + H S L
Sbjct: 822 VKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSL-- 879
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+++ + P + +I CK G D+A+ L + A+G
Sbjct: 880 -------------FTDMINQGLVP-LDVIHNMIQSHCKQGYLDKALMLHDALVAKG 921
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 163/303 (53%), Gaps = 5/303 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN+L+ L A +++ VP DV TYT ++ CK + A K+ D
Sbjct: 157 YTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVP-DVVTYTILLEATCKRSGYKQAMKLLD 215
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P+++ YN ++NG C++G +++A + + + + GC PN ++YN ++ GLC
Sbjct: 216 EMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAE 275
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R ++A+ LMA+M G+ NV T ++ LC G + A+ L + + P+ SY
Sbjct: 276 RWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYN 335
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++ FCK K D A++ ++ M +RG P + S+N + L GE+D A+ LL Q+
Sbjct: 336 PILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 395
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C P +SYNT+I GL A G+ ++ +L++ M+ G D YS + G C E +E
Sbjct: 396 GCTPVLISYNTVIDGLTKA-GKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEE 454
Query: 456 VMQ 458
++
Sbjct: 455 AIR 457
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 145/275 (52%), Gaps = 1/275 (0%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
PDV Y M+ GYC G ++ A+++ M ++P+ YNT+I G C +G A +++
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDD 181
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ RGC P+ +TY ++ C +A L+ +MR G ++ T+ ++ G+C G+
Sbjct: 182 MLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGR 241
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A+ +L+++ P+ SY +V+ G C + ++A L+ EM +G P V +FN
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L G ++ A+ +L Q+P+ C PN +SYN I+ C K +M V+ M+
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQK-KMDRAMAFVELMVSR 360
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G D Y+ LL C G V+ +++ H++ K
Sbjct: 361 GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 395
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 171/341 (50%), Gaps = 5/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L++A R K A+ + + + +YN ++ + + + A EF +
Sbjct: 197 LLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHG 256
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P VS Y +++G C E+A+K+ M+ K PN++ +N +I+ C++G +E A
Sbjct: 257 CEPNTVS-YNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPA 315
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++++ GC PN L+YN +++ C ++D A + M G ++ ++ ++L
Sbjct: 316 MEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTA 375
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ D AV L + + P + SY VI+G K GK+ EA+ LL EM +GL+P
Sbjct: 376 LCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPD 435
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +++ + L ++ AI ++ M PN V YN I+ GLC + + DL
Sbjct: 436 IITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRR-ETHNAIDLF 494
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI +G + + Y+ L++G EG V+ ++ E+ ++
Sbjct: 495 IYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSR 535
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 144/277 (51%), Gaps = 16/277 (5%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT-----VKPNLLAYNTMINGFCKKGELEEAK 246
P + +RG + G +E A ++ + M+ P A +I C G EA+
Sbjct: 57 PHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCA--ALIKKLCASGRTAEAR 114
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + C P+ + YNAM+ G C+ G++D A+ L+A M + + + T+ ++++GL
Sbjct: 115 RVLA-----ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPM---EPDSYTYNTLIRGL 166
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+ A+ L +++ PDV +Y +++ CK +A+ LL EMRA+G P +
Sbjct: 167 CGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDI 226
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++N V + + G +D AI LK +P C PN VSYN ++ GLC A+ R +D E L+
Sbjct: 227 ITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAE-RWEDAEKLMA 285
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M + G+ + ++ L+ C G VE M++ ++
Sbjct: 286 EMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQI 322
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 4/244 (1%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG V+ A+ Q + SYN +L + + A F +V P D+
Sbjct: 309 RGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYP-DIV 367
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
+Y T++ C+ G ++ A ++ + K P L++YNT+I+G K G+ +EA + +NEM
Sbjct: 368 SYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEM 427
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ +G +P+ +TY+ + GLC R++EA K++ G + N + ++L GLC +
Sbjct: 428 VTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRET 487
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
A+ ++ P+ +Y ++I G G EA LL E+ +RG+ A
Sbjct: 488 HNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAA 547
Query: 373 FRIL 376
R+L
Sbjct: 548 IRLL 551
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 170/343 (49%), Gaps = 40/343 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L L + + A + + K + P+ +TY ++ GYCKMG ++ A V ++
Sbjct: 245 TYNTILDTLCKKGRLGDARDLLMDM-KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL 303
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT + P++ YN +ING C +G +EEA K +EM N P+ ++YN +I G +
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L+ +M G K N TH M+K C GK D A + + E+ +PD +Y
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL-------------------- 376
+ING+CK G EA + EM + +K + N + R L
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Query: 377 ---------------VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
++G +DRA+ L +M + + +P+ V+YN II GLC G+ +
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC-GKTEQA 542
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
++ ++ SG D T Y+ +L GYC EG+VE Q ++MV
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 237/489 (48%), Gaps = 42/489 (8%)
Query: 20 LVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQT---NPYHALFFFN 76
L+ +IT+++ + N+ Q L+ + L +V ++ +T P + FF
Sbjct: 23 LIQTITTIL--------ASNNMPLQALNTYIPHLTPPLVLSILSSKTLISRPNILISFFK 74
Query: 77 WASNPNPN-PNKYHHTTPCYTAITDVLLSHSLISIAASLLKN---SNKLSDFFISKL--- 129
WA P P H++ P ++ L SH S A SLL +++ D +S L
Sbjct: 75 WAQTNLPTFP---HNSLPSLLSLLPSLFSHRKFSDAKSLLLGFIATDRRHDLHLSILRLT 131
Query: 130 ----------IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV---NSIKL 176
I AY G A F + K++ L + N+LL LVR +S+
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMI 233
+ E F+ +K +VP +V+T+ +I GYC ++A + +VM P+ + YNT++
Sbjct: 192 SREAFNDAIKLGIVP-NVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+ CKKG L +A+ + +M +RG PN TYN ++YG C G + EA ++ M N
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVME-ANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+V T+ ++ GLC G+ ++A LR+ ME + PDV SY +ING + K EA
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFK-LRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
LL+EM +G+KP + N + + + G++D A + +M + P+ V+YNT+I G C
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLK 472
A G M + +D M R +D + +L+ C E +E ++ K+G +
Sbjct: 430 KA-GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS-ARKRGYFID 487
Query: 473 LKNFLTRVV 481
++ T +V
Sbjct: 488 EVSYGTLIV 496
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 165/313 (52%), Gaps = 7/313 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKV 216
+++YN L+ L N ++ E F + EN+ + PDV +Y T+I G + I A K+
Sbjct: 313 VWTYNMLINGLC--NEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 217 FDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
+ M+ VKPN + +N M+ +CK+G++++A + +M G P+ +TYN +I G C
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G + EA M +M K + T ++L+ LC K ++A L + + D S
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I G+ K G D A+ L EM+ + + P+ ++N + L + G+ ++AI L ++
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ LP+ +YNTI+ G C +G ++ ++M+ + D + LL+G C EG +
Sbjct: 551 ESGLLPDETTYNTILHGYC-REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVL 609
Query: 454 ENVMQIAHEMVTK 466
E +++ + V+K
Sbjct: 610 EKALKLFNTWVSK 622
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 158/337 (46%), Gaps = 17/337 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y GN+ A + + + N++L L R ++ A + K
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+VS Y T+I GY K G ++ A K++D M K P+ + YN +I G C+ G+ E+A
Sbjct: 484 YFIDEVS-YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+NE++ G P+E TYN +++G C G V++A KM N FK +V T +L+G
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC+ G ++A+ + D +Y +I CK G+ D+A +LL EM + L P
Sbjct: 603 LCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+++NA+ L ++G + A + +M + LP+ V ++ E +V
Sbjct: 663 HYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVL-------------QLDKNETVV 709
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+ YS +K C EG ++ M+I E
Sbjct: 710 TSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGE 746
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 134/283 (47%), Gaps = 33/283 (11%)
Query: 111 AASLLKNSNKLSDFFISK-----LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
A LL ++ K +FI + LI Y GNV A+ + + K+ E +YN ++
Sbjct: 472 AYKLLSSARK-RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCII 530
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TV 222
G L + + A +++++ ++ PD +TY T++ GYC+ G +E A + + M +
Sbjct: 531 GGLCQCGKTEQAISKLNELLESGLL-PDETTYNTILHGYCREGDVEKAFQFHNKMVENSF 589
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
KP++ N ++ G C +G LE+A K N +++G + +TYN +I LC GR+D+A
Sbjct: 590 KPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFN 649
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD------------ 330
L+++M + T+ +++ L G+ +A ++ ++E PD
Sbjct: 650 LLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVV 709
Query: 331 -----------VKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+Y I C GK +A+ + E + +G+
Sbjct: 710 TSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGI 752
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L R ++ A +F +++V EN PDV T ++RG C G++E A K+F+
Sbjct: 560 TYNTILHGYCREGDVEKAFQFHNKMV-ENSFKPDVFTCNILLRGLCMEGVLEKALKLFNT 618
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
K + + YNT+I CK+G L++A ++EM + P+ TYNA+I L +GR
Sbjct: 619 WVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGR 678
Query: 277 VDEAKMLMAKMRLNG-FKDNV----------------------STHKSMLKGLCVVGKFD 313
+ EA+ M+KM G D V + +K LC GK+
Sbjct: 679 IREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYK 738
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
A+ + + D +Y +++G K KS
Sbjct: 739 DAMRIFGESKQKGITVDKSTYINLMDGLIKRRKS 772
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 182/343 (53%), Gaps = 11/343 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
S +I GN A+ +++E C L +Y +++ L + + A + +
Sbjct: 201 STVINGLCKSGNTSMAL---QLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSE 257
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+V + PPDV TY+T++ G+C +G + A +F+ M V PN + + +++G CK+G
Sbjct: 258 MVDRGI-PPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEG 316
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ EA+ M +G PN TYNA++ G C+N ++DEA+ ++ M G V ++
Sbjct: 317 MVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYN 376
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ G C + D+A L + E + PD +Y ++ G C++G+ EA++L KEM +
Sbjct: 377 ILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSS 436
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GL P + +++ + L ++G LD A+ LLK M + P+ V YN +I G+ +A G+++
Sbjct: 437 GLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIA-GKLEV 495
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++L ++ G Y+ ++KG +EG + ++ +M
Sbjct: 496 AKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKM 538
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 186/362 (51%), Gaps = 9/362 (2%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
IS+ + K + + LI G +K A+ F++ + + + SY++++
Sbjct: 147 ISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVING 206
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
L + + +A + ++ +E P++ YTT+I CK ++ +A + M + P
Sbjct: 207 LCKSGNTSMALQLLRKM-EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP 265
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+++ Y+T+++GFC G L EA NEM+ R PN +T+ ++ GLC G V EA+ +
Sbjct: 266 DVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVF 325
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G + N T+ +++ G C+ + D+A L +++ P V SY ++ING+CK
Sbjct: 326 EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR 385
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
+ DEA SLL EM + L P +++ + + L + G A+ L K+M LP+ ++Y
Sbjct: 386 RRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTY 445
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+T++ GLC G + + L+ M S D +Y+ L++G G +E +A E+
Sbjct: 446 STLLDGLC-KHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLE----VAKELF 500
Query: 465 TK 466
+K
Sbjct: 501 SK 502
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 174/348 (50%), Gaps = 40/348 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+YS N L+ L R+N + A ++ K + PD T+ T+I G C G I+ A +F
Sbjct: 127 VYSLNILINCLCRLNHVVFAISVLGKMFKLG-IQPDAITFNTLINGRCIEGEIKEAVGLF 185
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + P++++Y+T+ING CK G A + + +M +GC+PN + Y +I LC +
Sbjct: 186 NEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKD 245
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
V++A L+++M G +V T+ ++L G C +G ++A ++ N+ P+ ++
Sbjct: 246 TLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF 305
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA----------------VFRILVE 378
++++G CK G EA + + M +G +P +++NA V I+V+
Sbjct: 306 TILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVD 365
Query: 379 NG-------------------ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G LD A LL +M + + P+ V+Y+T++ GLC GR Q
Sbjct: 366 KGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQV-GRPQ 424
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ +L M SG D YS LL G C+ G+++ +++ M K
Sbjct: 425 EALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESK 472
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 181/360 (50%), Gaps = 15/360 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFI-------SKLIKAYGDRGNVKAAIFWFH 147
YT I D L +L++ A LL +++ D I S ++ + G++ A F+
Sbjct: 235 YTTIIDSLCKDTLVNDAMDLL---SEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFN 291
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ ++ L+ L + + A F + K+ P+ TY ++ GYC
Sbjct: 292 EMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGA-EPNAYTYNALMDGYCLN 350
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
++ A+KV D+M K P + +YN +ING+CK+ L+EAK + EM + P+ +TY
Sbjct: 351 NQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTY 410
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+ ++ GLC GR EA L +M +G ++ T+ ++L GLC G D+A+ L+++ E
Sbjct: 411 STLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQE 470
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ + PD+ Y ++I G GK + A L ++ A G++PT+ ++ + + L++ G D
Sbjct: 471 SKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDE 530
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A L ++M LPN SYN II G + + L+D M+ + D + + LL
Sbjct: 531 AYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIR-LIDEMVGKRFSADSSTFQMLL 589
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 127/249 (51%), Gaps = 1/249 (0%)
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
D+ V N+ + N +IN C+ + A + +M G +P+ +T+N +I G CI G +
Sbjct: 119 DLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEI 178
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L +M G + +V ++ +++ GLC G A+ LR + E P++ +Y +
Sbjct: 179 KEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTI 238
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ CK ++A+ LL EM RG+ P V +++ + G L+ A +L +M +
Sbjct: 239 IDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNV 298
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+PN V++ ++ GLC +G + + + + M + G + Y+ L+ GYC ++
Sbjct: 299 MPNTVTFTILVDGLC-KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQ 357
Query: 458 QIAHEMVTK 466
++ MV K
Sbjct: 358 KVLDIMVDK 366
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M +P+++ + + KK + N+M G N + N +I LC V
Sbjct: 86 MNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVF 145
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A ++ KM G + + T +++ G C+ G+ +AVG ++ PDV SY VIN
Sbjct: 146 AISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVIN 205
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G CK G + A+ LL++M +G KP + ++ + L ++ ++ A+ LL +M P
Sbjct: 206 GLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP 265
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ V+Y+TI+ G C + G + + L + M+ + ++ L+ G C+EG V +
Sbjct: 266 DVVTYSTILHGFC-SLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEA-RC 323
Query: 460 AHEMVTKKG 468
E +TKKG
Sbjct: 324 VFEAMTKKG 332
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+++A M+ RP+ + + + + + L +M L G NV +
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ LC + A+ L + + + PD ++ +ING C G+ EA+ L EM RG
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+P V S++ V L ++G A+ LL++M + C PN V+Y TII LC + D
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLC-KDTLVNDA 251
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
DL+ M+ G D YS +L G+C G++ + +EMV +
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR 296
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 110/227 (48%), Gaps = 8/227 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y R + A + + E +Y++L+ L +V + A F ++
Sbjct: 378 LINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSG 437
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
++P D+ TY+T++ G CK G ++ A K+ M ++P+++ YN +I G G+LE A
Sbjct: 438 LLP-DLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVA 496
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K+ +++ G +P TY MI GL G DEA L KM +GF N ++ +++G
Sbjct: 497 KELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQG 556
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
A+ + ++ + D +++++++ + DE IS
Sbjct: 557 FLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD----LESRDEIIS 599
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 170/343 (49%), Gaps = 40/343 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L L + + A + + K + P+ +TY ++ GYCKMG ++ A V ++
Sbjct: 245 TYNTILDALCKKGRLGDARDLLMDM-KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL 303
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT + P++ YN +ING C +G +EEA K +EM N P+ ++YN +I G +
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L+ +M G K N TH M+K C GK D A + + E+ +PD +Y
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL-------------------- 376
+ING+CK G EA + EM + +K + N + R L
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Query: 377 ---------------VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
++G +DRA+ L +M + + +P+ V+YN II GLC G+ +
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC-GKTEQA 542
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
++ ++ SG D T Y+ +L GYC EG+VE Q ++MV
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 237/489 (48%), Gaps = 42/489 (8%)
Query: 20 LVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQT---NPYHALFFFN 76
L+ +IT+++ + N+ Q L+ + L +V ++ +T P + FF
Sbjct: 23 LIQTITTIL--------ASNNMPLQALNTYIPQLTPPLVLSILSSKTLISRPNILISFFK 74
Query: 77 WASNPNPN-PNKYHHTTPCYTAITDVLLSHSLISIAASLLKN---SNKLSDFFISKL--- 129
WA P P H++ P ++ L SH S A SLL +++ D +S L
Sbjct: 75 WAQTNLPTFP---HNSLPSLLSLLPSLFSHRKFSDAKSLLLGFIATDRRHDLHLSILRLT 131
Query: 130 ----------IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV---NSIKL 176
I AY G A F + K++ L + N+LL LVR +S+
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMI 233
+ E F+ +K +VP +V+T+ +I GYC ++A + +VM P+ + YNT++
Sbjct: 192 SREAFNDAIKLGIVP-NVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+ CKKG L +A+ + +M +RG PN TYN ++YG C G + EA ++ M N
Sbjct: 251 DALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVME-ANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+V T+ ++ GLC G+ ++A LR+ ME + PDV SY +ING + K EA
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFK-LRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
LL+EM +G+KP + N + + + G++D A + +M + P+ V+YNT+I G C
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLK 472
A G M + +D M R +D + +L+ C E +E ++ K+G +
Sbjct: 430 KA-GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS-ARKRGYFID 487
Query: 473 LKNFLTRVV 481
++ T +V
Sbjct: 488 EVSYGTLIV 496
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 165/313 (52%), Gaps = 7/313 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKV 216
+++YN L+ L N ++ E F + EN+ + PDV +Y T+I G + I A K+
Sbjct: 313 VWTYNMLINGLC--NEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 217 FDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
+ M+ VKPN + +N M+ +CK+G++++A + +M G P+ +TYN +I G C
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G + EA M +M K + T ++L+ LC K ++A L + + D S
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I G+ K G D A+ L EM+ + + P+ ++N + L + G+ ++AI L ++
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ LP+ +YNTI+ G C +G ++ ++M+ + D + LL+G C EG +
Sbjct: 551 ESGLLPDETTYNTILHGYC-REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGML 609
Query: 454 ENVMQIAHEMVTK 466
E +++ + V+K
Sbjct: 610 EKALKLFNTWVSK 622
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 157/337 (46%), Gaps = 17/337 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y GN+ A + + + N++L L R ++ A + K
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+VS Y T+I GY K G ++ A K++D M K P+ + YN +I G C+ G+ E+A
Sbjct: 484 YFIDEVS-YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+NE++ G P+E TYN +++G C G V++A KM N FK +V T +L+G
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC+ G ++A+ + D +Y +I CK G+ D+A +LL EM + L P
Sbjct: 603 LCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+++NA+ L ++G + A + +M + LP V ++ E +V
Sbjct: 663 HYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL-------------QLDXNETVV 709
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+ YS +K C EG ++ M+I E
Sbjct: 710 TSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGE 746
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 133/283 (46%), Gaps = 33/283 (11%)
Query: 111 AASLLKNSNKLSDFFISK-----LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
A LL ++ K +FI + LI Y GNV A+ + + K+ E +YN ++
Sbjct: 472 AYKLLSSARK-RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCII 530
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TV 222
G L + + A +++++ ++ PD +TY T++ GYC+ G +E A + + M +
Sbjct: 531 GGLCQCGKTEQAISKLNELLESGLL-PDETTYNTILHGYCREGDVEKAFQFHNKMVENSF 589
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
KP++ N ++ G C +G LE+A K N +++G + +TYN +I LC GR+D+A
Sbjct: 590 KPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFN 649
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP------------- 329
L+++M + T+ +++ L G+ +A ++ ++E P
Sbjct: 650 LLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVV 709
Query: 330 ----------DVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+Y I C GK +A+ + E + +G+
Sbjct: 710 TSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGI 752
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L R ++ A +F +++V EN PDV T ++RG C GM+E A K+F+
Sbjct: 560 TYNTILHGYCREGDVEKAFQFHNKMV-ENSFKPDVFTCNILLRGLCMEGMLEKALKLFNT 618
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
K + + YNT+I CK+G L++A ++EM + P+ TYNA+I L +GR
Sbjct: 619 WVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGR 678
Query: 277 VDEAKMLMAKMRLNGF-----------------------KDNVSTHKSMLKGLCVVGKFD 313
+ EA+ M+KM G + + +K LC GK+
Sbjct: 679 IREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYK 738
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
A+ + + D +Y +++G K KS
Sbjct: 739 DAMRIFGESKQKGITVDKSTYINLMDGLIKRRKS 772
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 182/329 (55%), Gaps = 8/329 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + + + A+ ++V E++VP DV TY +++ G CK G ++ A+ +
Sbjct: 157 TYNALINGFCKADKLDEAQRILQRMVSESLVP-DVVTYNSLVNGLCKNGRVDEARMLIVD 215
Query: 220 MTVKPNLLAYNTMINGFCKK-GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
PN++ Y+T+I+G C++ LE A++ + +M+ GC+P+ ++YNA+I+GL V
Sbjct: 216 KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVS 275
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EA L + G++ V T+ ++ GL + ++A +++ + PD +Y V I
Sbjct: 276 EALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFI 335
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
+G CK G+ ++A+ +LK+M +G P V S NAV L + +D A +LL M C
Sbjct: 336 DGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 395
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC---EEGNVEN 455
PN +S+NT+ICG C A G+ + M++ G Y+ L+ G C +EG ++
Sbjct: 396 PNAISFNTLICGQCRA-GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKE 454
Query: 456 VMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
+ + M+ +KGR+ + + + ++D L
Sbjct: 455 AITLFDAMI-EKGRVPDVVTY-SALIDGL 481
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 147/273 (53%), Gaps = 5/273 (1%)
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP--NLLAYNTMINGFCKKGELEEAK 246
+ PD T ++R K G IE A + + + VK ++ +N I+G C+ + +A+
Sbjct: 11 IYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQ 70
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ M G PN +TYNA++ GLC GR+ +A+ L +M G+ +V T+ ++L G
Sbjct: 71 TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C VGK D+A+ ++ PDV +Y +INGFCK K DEA +L+ M + L P V
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDV 190
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++N++ L +NG +D A +L+ PN ++Y+T+I GLC R++ L++
Sbjct: 191 VTYNSLVNGLCKNGRVDEARMLIVDKGFS---PNVITYSTLISGLCRELRRLESARQLLE 247
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+M+ +G D Y+ L+ G E V +++
Sbjct: 248 KMVLNGCKPDIVSYNALIHGLAREQGVSEALKL 280
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 162/307 (52%), Gaps = 10/307 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ L++ + + A E F +VK + PD TYT I G CK G +E+A +
Sbjct: 295 TYNILIDGLLKEDRVNEAFELFSGLVKHGL-EPDAITYTVFIDGLCKAGRVEDALLMLKD 353
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++++N +ING CK+ ++EA+ ++ M +GC PN +++N +I G C G+
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 413
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV---GKFDQAVGYLRNVMEANMNPDVKS 333
+A +M G K V T+ ++ GLC G+ +A+ ++E PDV +
Sbjct: 414 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 473
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I+G K GK D+A LL M A+G P V+++N++ L ++D A+ L M
Sbjct: 474 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMV 533
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQD-VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ C+P+ ++Y TII LC K M D L D + +G MY L+ G C
Sbjct: 534 EKGCVPDTITYGTIISALC--KQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVAR 591
Query: 453 VENVMQI 459
V+ +++
Sbjct: 592 VDEALKL 598
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 150/320 (46%), Gaps = 25/320 (7%)
Query: 88 YHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLS--------DFFISKLIKAYGDRGNV 139
Y P Y + D LL ++ A L K FI L KA G V
Sbjct: 289 YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA----GRV 344
Query: 140 KAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
+ A+ K ++ C+ S+N+++ L + + AE + + P +S
Sbjct: 345 EDALLML---KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAIS- 400
Query: 197 YTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCK---KGELEEAKKCMN 250
+ T+I G C+ G + A F M VKP ++ YN +++G CK +G ++EA +
Sbjct: 401 FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 460
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M+ +G P+ +TY+A+I GL G++D+A+ L+ M G NV T+ S++ GLC +
Sbjct: 461 AMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLD 520
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
K D+A+ ++E PD +Y +I+ CK D+A++L G+ PT +
Sbjct: 521 KVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYF 580
Query: 371 AVFRILVENGELDRAILLLK 390
++ L +D A+ LL+
Sbjct: 581 SLIDGLCAVARVDEALKLLQ 600
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 196/396 (49%), Gaps = 29/396 (7%)
Query: 80 NPN-PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSD-----FFISKLIKAY 133
+PN PNP H L++ ++ A L++ S + +KLI+
Sbjct: 36 SPNAPNPASAHLRR---------LIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNL 86
Query: 134 GDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
RG A A+ + +++YN+L+ R + A +++ V PD
Sbjct: 87 CRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA----RRLIGSMPVAPD 142
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
TYT +IR C G + +A + D M +PN++ Y ++ C+ E+A ++
Sbjct: 143 AYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLD 202
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
EM +GC PN +TYN +I G+C GRVD+A+ L+ ++ GF+ + ++ ++LKGLC
Sbjct: 203 EMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASK 262
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
++D +ME N P+ +++++I FC+ G + AI +L++M G N
Sbjct: 263 RWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCN 322
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
V + + G +D A LL M C P+ +SY T++ GLC A+ R D ++L++ M+R
Sbjct: 323 IVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE-RWDDAKELLNEMVR 381
Query: 431 SG---HNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ + + F + C+L C++G +E + + +M
Sbjct: 382 NNCPPNEVTFNTFICIL---CQKGLIEQAIMLIEQM 414
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 171/346 (49%), Gaps = 8/346 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + L+ Y G++ AA + Y+Y L+ VL + A
Sbjct: 112 FAYNTLVAGYCRYGHLDAARRLIGSMPVAPDA---YTYTPLIRVLCDRGRVADALSLLDD 168
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+++ P+V TYT ++ C+ E A V D M K PN++ YN +ING C++G
Sbjct: 169 MLRRGC-QPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREG 227
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+++A++ +N + + G +P+ ++Y ++ GLC + R D+ + L A+M N T
Sbjct: 228 RVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 287
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ C G ++A+ L + E + +VIN CK G+ D+A LL +M +
Sbjct: 288 MLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSY 347
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G P S+ V + L D A LL +M + +C PN V++NT IC LC KG ++
Sbjct: 348 GCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQ-KGLIEQ 406
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+++M G + Y+ L+ G+C +G++++ +++ M K
Sbjct: 407 AIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK 452
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 141/274 (51%), Gaps = 1/274 (0%)
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
P DV Y T++ GYC+ G ++ A+++ M V P+ Y +I C +G + +A ++
Sbjct: 108 PVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLD 167
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
+M+ RGC+PN +TY ++ +C N ++A ++ +MR G N+ T+ ++ G+C G
Sbjct: 168 DMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREG 227
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ D A L + PD SY ++ G C + D+ L EM + P +F+
Sbjct: 228 RVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 287
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ R G ++RAI +L+QM + C N N +I +C +GR+ D L++ M
Sbjct: 288 MLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSIC-KQGRVDDAFKLLNDMGS 346
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G N D Y+ +LKG C ++ ++ +EMV
Sbjct: 347 YGCNPDTISYTTVLKGLCRAERWDDAKELLNEMV 380
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 186/383 (48%), Gaps = 9/383 (2%)
Query: 85 PNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIF 144
P+ Y +T P + D +S+ +L+ + + + L++A + A+
Sbjct: 141 PDAYTYT-PLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMA 199
Query: 145 WFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
+ + + +YN ++ + R + A E +++ PD +YTT+++G
Sbjct: 200 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGF-QPDTVSYTTLLKGL 258
Query: 205 CKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
C ++ +++F M K PN + ++ +I FC+ G +E A + + +M GC N
Sbjct: 259 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNT 318
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
N +I +C GRVD+A L+ M G + ++ ++LKGLC ++D A L
Sbjct: 319 TLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNE 378
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
++ N P+ ++ I C+ G ++AI L+++M G V ++NA+ G
Sbjct: 379 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH 438
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+D A+ L + MP C PN ++Y T++ GLC A+ R+ +LV M+R + ++
Sbjct: 439 IDSALELFRSMP---CKPNTITYTTLLTGLCNAE-RLDGAAELVAEMLRGDCPPNVVTFN 494
Query: 442 CLLKGYCEEGNVENVMQIAHEMV 464
L+ +C++G +E +++ +M+
Sbjct: 495 VLVSFFCQKGFLEEAIELVEQMM 517
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 172/378 (45%), Gaps = 76/378 (20%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SY +LL L EE F +++++N +P +V T+ +IR +C+ GM+E A +V +
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEV-TFDMLIRFFCRGGMVERAIQVLEQ 308
Query: 220 MT--------------------------------------VKPNLLAYNTMINGFCKKGE 241
MT P+ ++Y T++ G C+
Sbjct: 309 MTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAER 368
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++AK+ +NEM+ C PNE+T+N I LC G +++A ML+ +M +G V T+ +
Sbjct: 369 WDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNA 428
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G CV G D A+ R++ P+ +Y ++ G C + D A L+ EM
Sbjct: 429 LVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGD 485
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC--------- 412
P V +FN + + G L+ AI L++QM + C PN ++YNT++ G+
Sbjct: 486 CPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDAL 545
Query: 413 ------MAKGRMQDV------------EDLVDRMIRSGHNL-DFTM------YSCLLKGY 447
++KG DV ED ++ ++ H + D M Y+ +L G
Sbjct: 546 ELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGL 605
Query: 448 CEEGNVENVMQIAHEMVT 465
C+ ++N + MV+
Sbjct: 606 CKRCEIDNAIDFFAYMVS 623
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 140/273 (51%), Gaps = 2/273 (0%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+ + +L + I+ A Q+ E+ V TY ++ G+C G I++A ++F
Sbjct: 390 TFNTFICILCQKGLIEQAIMLIEQM-SEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS 448
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M KPN + Y T++ G C L+ A + + EM+ C PN +T+N ++ C G ++E
Sbjct: 449 MPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEE 508
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L+ +M +G N+ T+ ++L G+ + A+ L ++ ++PDV ++ +I
Sbjct: 509 AIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIG 568
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
K + +EA+ L ++ G++P +N + L + E+D AI M C+P
Sbjct: 569 ILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMP 628
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
N +Y +I GL +G +++ +DL+ + G
Sbjct: 629 NESTYIILIEGL-AHEGLLKEAQDLLSVLCSRG 660
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 18/261 (6%)
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G P+ +I LC GR +A ++ +G +V + +++ G C G D A
Sbjct: 71 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
R + + PD +Y +I C G+ +A+SLL +M RG +P V ++ +
Sbjct: 131 ---RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
+ N ++A+ +L +M C PN V+YN II G+C +GR+ D +L++R+ G
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCR-EGRVDDARELLNRLPSYGFQP 246
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSW 495
D Y+ LLKG C ++V ++ EM+ K V +L+ + GG
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNC-------MPNEVTFDMLIRFFCRGG-- 297
Query: 496 ISRFVFVHQVVVIMERTVEDG 516
V + + ++E+ E G
Sbjct: 298 -----MVERAIQVLEQMTEHG 313
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 119/237 (50%), Gaps = 7/237 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + +G++ +A+ F N +Y +LL L + A E ++++ +
Sbjct: 429 LVNGFCVQGHIDSALELFRSMPCKPN---TITYTTLLTGLCNAERLDGAAELVAEMLRGD 485
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
PP+V T+ ++ +C+ G +E A ++ + M PNL+ YNT+++G K E+A
Sbjct: 486 C-PPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDA 544
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ ++++G P+ +T++++I L R++EA L ++ G + + +L G
Sbjct: 545 LELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLG 604
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
LC + D A+ + ++ P+ +Y ++I G G EA LL + +RG+
Sbjct: 605 LCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 163/306 (53%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ L + + A + + ++ + P D TYTT+I G+C +G + A + D M
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFP-DAITYTTLIYGFCLLGQLMGAFSLLDEM 211
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+K P + YN +IN CK+G ++EAK + M G +P +TY+ ++ G C+ G V
Sbjct: 212 ILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEV 271
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
AK + M G NV ++ M+ GLC + D+A+ LR ++ NM PD +Y +
Sbjct: 272 QNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSL 331
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G CK G+ A++L+ EM RG V ++ ++ L +N LD+A L +M +
Sbjct: 332 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P +Y +I GLC GR+++ ++L ++ G +D Y+ ++ G C+EG + +
Sbjct: 392 QPTMYTYTALIDGLCKG-GRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL 450
Query: 458 QIAHEM 463
I +M
Sbjct: 451 AIKSKM 456
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 185/382 (48%), Gaps = 19/382 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDF----FISKLIKAYGDRGNVKAAIFWFHQA- 149
Y I D L L++ A L + F + LI + G + A +
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMI 212
Query: 150 -KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
K I G +Y YN L+ L + ++K A+ + KE + P V TY+T++ GYC +G
Sbjct: 213 LKNINPG--VYIYNILINALCKEGNVKEAKNLLAVMTKEGI-KPGVVTYSTLMDGYCLVG 269
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
++NAK++F M V PN+ +YN MING CK ++EA + EM+++ P+ +TYN
Sbjct: 270 EVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYN 329
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
++I GLC +GR+ A LM +M G +V T+ S+L LC D+A + E
Sbjct: 330 SLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER 389
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ P + +Y +I+G CK G+ A L + + +G V+++ + L + G D A
Sbjct: 390 GIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEA 449
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG-HNLDFTMYSCLL 444
+ + +M C+PN V++ II L K E L+ MI G LDF + +
Sbjct: 450 LAIKSKMEDNGCIPNAVTFEIIIRSL-FEKDENDKAEKLLHEMIAKGLLVLDFKVADVFV 508
Query: 445 KGYCEEGNVENVMQIAHEMVTK 466
+ E E ++ HEM+ K
Sbjct: 509 QN--ENDKAEKLL---HEMIAK 525
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 143/275 (52%), Gaps = 4/275 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKC 248
PD T T+++G C G ++ + D + + + ++Y T++NG CK GE A K
Sbjct: 78 PDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKL 137
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ + +R RPN + YN +I GLC + V+EA L ++M G + T+ +++ G C+
Sbjct: 138 LRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCL 197
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+G+ A L ++ N+NP V Y ++IN CK G EA +LL M G+KP V +
Sbjct: 198 LGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVT 257
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++ + GE+ A + M QM PN SYN +I GLC K R+ + +L+ M
Sbjct: 258 YSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCK-RVDEAMNLLREM 316
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ D Y+ L+ G C+ G + + + + +EM
Sbjct: 317 LHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM 351
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 124/245 (50%), Gaps = 2/245 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P ++ +N ++ K + A +M +G R N +T N +I C G++ + +
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ K+ G++ + T +++KGLC+ G+ +++ + V+ D SY ++NG CK
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
IG++ A+ LL+ + R +P V +N + L ++ ++ A L +M P+ ++
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y T+I G C+ G++ L+D MI N +Y+ L+ C+EGNV+ + M
Sbjct: 188 YTTLIYGFCLL-GQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246
Query: 464 VTKKG 468
TK+G
Sbjct: 247 -TKEG 250
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 205/430 (47%), Gaps = 58/430 (13%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLS----DFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ + L IS A L + KL L+K GN+ A+ HQ
Sbjct: 229 YSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTAL-QLHQEM 287
Query: 151 QIENG-------ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
+ G L SY+ ++ L + A E F ++ + ++P DV +YTT+I G
Sbjct: 288 LNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMP-DVISYTTLIHG 346
Query: 204 YCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
+C G E AK +F+ M ++P++ + +I+ CKKG++ EA K + ++ RGC P+
Sbjct: 347 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPD 406
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+T ++ GLC+ R+ +A L KM+ G NV T +++KGLC G A+ +
Sbjct: 407 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 466
Query: 321 NVME------ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS------ 368
N++ N P+ SY ++I+G CK G+ DEA L KEM+A G+ P V S
Sbjct: 467 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIH 526
Query: 369 -----------------------------FNAVFRILVENGELDRAILLLKQMPQMDCLP 399
F+ + +L + G++ A LL+ M Q C+P
Sbjct: 527 GFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 586
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
N V+Y T++ GLCM R+ + L +M + G D Y L+KG C+ GN++ +++
Sbjct: 587 NTVTYTTLVKGLCM-NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 645
Query: 460 AHEMVTKKGR 469
+M++ G+
Sbjct: 646 HKKMLSDTGQ 655
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 176/341 (51%), Gaps = 27/341 (7%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDF----FISKLIKAYGDRGNVKAAIFWFHQA 149
C T + + + H IS A L KL + L+K GN+K A+ H
Sbjct: 410 CTTLVKGLCMKHR-ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIAL-ELH-- 465
Query: 150 KQIENGACLY---------SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
K + + Y SY+ ++ L + A E F ++ V+P DV +YT++
Sbjct: 466 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP-DVISYTSL 524
Query: 201 IRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I G+C+ G ++AK +F+ M V+P++ ++ +I+ CK+G++ EA + + M+ RGC
Sbjct: 525 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGC 584
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
PN +TY ++ GLC+N R+ EA L KM+ G +V T+ +++KGLC G A+
Sbjct: 585 IPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALE 644
Query: 318 YLRNVME------ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
+ ++ N PDV SY ++I+G CK G+ DEA L KEM+A G+ P V S+ +
Sbjct: 645 LHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTS 704
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+ +G+L+ A L +M N V+Y+ +I G C
Sbjct: 705 LIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFC 745
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 182/345 (52%), Gaps = 15/345 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+K + + A F + +++ + + +L+ L + +IK+A E ++
Sbjct: 411 TTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 470
Query: 187 ENV-----VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCK 238
+ P+ +Y+ +I G CK G + A+++F M V P++++Y ++I+GFC+
Sbjct: 471 DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR 530
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G+ ++AK NEM++ G +P+ T++ +I LC G+V EA L+ M G N T
Sbjct: 531 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 590
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++KGLC+ + +A + + PDV +Y ++ G C+ G A+ L K+M
Sbjct: 591 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 650
Query: 359 A------RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+ KP V S++ + L ++G D A L K+M + +PN +SY ++I G C
Sbjct: 651 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 710
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ G+++D + L + M+ G L+ YS ++ G+C+EG ++ +
Sbjct: 711 RS-GKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 154/290 (53%), Gaps = 12/290 (4%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAK 246
+ PDV+T +I +CK G + A ++ +VM + +++ Y+T+I G C K + EA
Sbjct: 6 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEAT 65
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-------FKDNVSTH 299
+ M GCRP+ + Y ++ GLC G+++ A L +M LN K + ++
Sbjct: 66 QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM-LNDTSQYGIKCKPTLVSY 124
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ GLC + D+A + + M PDV SY +I+GFC+ GK ++A L EM
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G++ V + + + IL + G++ A LL+ M Q C+ + V+Y+T+I GLCM K R+
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM-KHRIS 243
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+ L M + G D Y L+KG C+ GN+ +Q+ EM+ GR
Sbjct: 244 EATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGR 293
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 190/393 (48%), Gaps = 35/393 (8%)
Query: 102 LLSHSLISIAASLLKNSNKLSDFFISKLIKAYG---DRGNVKAAIFWFHQAKQIENGACL 158
L+S+S+I + ++ + F K +KA G D + I F + + E CL
Sbjct: 302 LISYSIIIDGLCKDRREDEARELF--KEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 359
Query: 159 Y-------------SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+ + + L+ +L + + A + +++ +P DV T TT+++G C
Sbjct: 360 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIP-DVVTCTTLVKGLC 418
Query: 206 KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR------G 256
I A ++F M PN++ T++ G C+ G ++ A + M++
Sbjct: 419 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 478
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C+PN ++Y+ +I GLC GR DEA+ L +M+ G +V ++ S++ G C GK+ A
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 538
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+++ + PDV ++ V+I+ CK GK EA LL+ M RG P ++ + + L
Sbjct: 539 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 598
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI----RSG 432
N + A L +M ++ CLP+ V+Y T++ GLC G ++ +L +M+ + G
Sbjct: 599 CMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQT-GNIKTALELHKKMLSDTGQYG 657
Query: 433 HNL--DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
N D YS ++ G C+ G + ++ EM
Sbjct: 658 TNFKPDVISYSIIIDGLCKHGREDEARELFKEM 690
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 193/393 (49%), Gaps = 35/393 (8%)
Query: 102 LLSHSLISIAASLLKNSNKLSDFFISKLIKAYG---DRGNVKAAIFWFHQAKQIENGACL 158
L+S+S+I + ++ + F K +KA G D + + I F ++ + E CL
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELF--KEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178
Query: 159 Y-------------SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+ + + L+ +L + + A E +++ + D+ TY+T+I+G C
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL-DIVTYSTLIKGLC 237
Query: 206 KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG------ 256
I A ++F M +P+ +AY T++ G C+ G + A + EM+N
Sbjct: 238 MKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIK 297
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C+P ++Y+ +I GLC + R DEA+ L +M+ G +V ++ +++ G C+ GK+++A
Sbjct: 298 CKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAK 357
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+++ + PDV + V+I+ CK GK EA LL+ + RG P V + + + L
Sbjct: 358 CLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGL 417
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS----G 432
+ +A L +M ++ C+PN V+ T++ GLC + G ++ +L M+ G
Sbjct: 418 CMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQS-GNIKIALELHKNMLSDTSPYG 476
Query: 433 HNL--DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
N + YS ++ G C+ G + ++ EM
Sbjct: 477 INCKPNAISYSIIIDGLCKCGREDEARELFKEM 509
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 176/381 (46%), Gaps = 35/381 (9%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +Y++L+ L + I A + F + K PD Y T+++G C+ G I A +
Sbjct: 45 IVTYSTLIKGLCMKHRISEATQLFMSMKKLGC-RPDAIAYGTLMKGLCQTGKINIALHLH 103
Query: 218 DVM---------TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
M KP L++Y+ +I+G CK +EA++ EM +G P+ ++Y ++I
Sbjct: 104 QEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLI 163
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
+G C +G+ ++AK L +M G + +V+T ++ LC GK +A L +++
Sbjct: 164 HGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCI 223
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
D+ +Y +I G C + EA L M+ G +P ++ + + L + G ++ A+ L
Sbjct: 224 LDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQL 283
Query: 389 LKQMPQ------MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
++M + C P +SY+ II GLC + R + +L M G D Y+
Sbjct: 284 HQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR-REDEARELFKEMKAQGIMPDVISYTT 342
Query: 443 LLKGYCEEGNVENVMQIAHE------------------MVTKKGRLLKLKNFLTRVVDAL 484
L+ G+C G E + +E M+ KKG++++ L V+
Sbjct: 343 LIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG 402
Query: 485 LLMWIVTGGSWISRFVFVHQV 505
+ +VT + + H++
Sbjct: 403 CIPDVVTCTTLVKGLCMKHRI 423
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 98/176 (55%), Gaps = 13/176 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ L + I A + F ++ K +P DV TY T+++G C+ G I+ A ++
Sbjct: 590 TYTTLVKGLCMNDRISEATQLFMKMQKLGCLP-DVVTYGTLMKGLCQTGNIKTALELHKK 648
Query: 220 M---------TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
M KP++++Y+ +I+G CK G +EA++ EM G PN ++Y ++I+G
Sbjct: 649 MLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHG 708
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
C +G++++AK L +M G + N T+ M+ G C G+ D+A L MEAN
Sbjct: 709 FCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA---LFQKMEAN 761
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 194/395 (49%), Gaps = 44/395 (11%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
S+ A +LK ++ LIK +G VK A+ FH K + G L SY +L+
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKAL-HFHD-KLLAQGFQLNQVSYATLIN 172
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
+ ++ + A +F +I + PDV Y T+I CK ++ A +F M VK
Sbjct: 173 GVCKIGDTRAAIKFLRKI-DGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGIS 231
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
+++ YNT+I GFC G+L+EA +NEM+ + PN TYN ++ LC G+V EAK +
Sbjct: 232 ADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 284 MA-----------------------------------KMRLNGFKDNVSTHKSMLKGLCV 308
+A M L G +V T+ ++ G C
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 351
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
D+A+ + + + NM P + +Y +I+G CK G+ L+ EMR RG V +
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVIT 411
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++++ L +NG LDRAI L +M + PN ++ ++ GLC GR++D +++ +
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG-GRLKDAQEVFQDL 470
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G++L+ Y+ ++ G+C++G +E + + +M
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKM 505
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 187/381 (49%), Gaps = 40/381 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+K++ ++ + A+ H+ + L + N L+ + I +I+K
Sbjct: 63 NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILK 122
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELE 243
PPD T T+I+G C G ++ A D + + N ++Y T+ING CK G+
Sbjct: 123 RGY-PPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 181
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A K + ++ R +P+ + YN +I +C V EA L ++M + G +V T+ +++
Sbjct: 182 AAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLI 241
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C+VGK +A+G L ++ +NP+V +Y ++++ CK GK EA S+L M +K
Sbjct: 242 YGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK 301
Query: 364 PTVFS--------------------FNAV-----------FRILV----ENGELDRAILL 388
P V + FNA+ + IL+ +N +D A+ L
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
K+M Q + +P V+Y+++I GLC + GR+ V DL+D M G D YS L+ G C
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKS-GRISYVWDLIDEMRDRGQPADVITYSSLIDGLC 420
Query: 449 EEGNVENVMQIAHEMVTKKGR 469
+ G+++ + + ++M ++ R
Sbjct: 421 KNGHLDRAIALFNKMKDQEIR 441
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 176/345 (51%), Gaps = 9/345 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSDFFIS--KLIKAYGDRGNVKAAIFWFHQAK 150
Y I D + + L+S A L +S ++ LI + G +K AI ++
Sbjct: 202 YNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMV 261
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+Y+YN L+ L + +K A+ ++K V PDV TY+T++ GY + +
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA-CVKPDVITYSTLMDGYFLVYEV 320
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ VF+ M+ V P++ Y +INGFCK ++EA EM + P +TY+++
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC +GR+ L+ +MR G +V T+ S++ GLC G D+A+ + + +
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P++ ++ ++++G CK G+ +A + +++ +G V+++N + + G L+ A+
Sbjct: 441 RPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALT 500
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+L +M C+PN ++ TII L K E L+ +MI G
Sbjct: 501 MLSKMEDNGCIPNAFTFETIIIAL-FKKDENDKAEKLLRQMIARG 544
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 131/259 (50%), Gaps = 4/259 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
P + + ++ + KM A + ++ ++P+L+ N +IN FC G++
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +++ RG P+ +T N +I GLC+ G+V +A K+ GF+ N ++ +++ G+C
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+G A+ +LR + PDV Y +I+ CK EA L EM +G+ V +
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + G+L AI LL +M PN +YN ++ LC +G++++ + ++ M
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC-KEGKVKEAKSVLAVM 295
Query: 429 IRSGHNLDFTMYSCLLKGY 447
+++ D YS L+ GY
Sbjct: 296 LKACVKPDVITYSTLMDGY 314
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 139/286 (48%), Gaps = 13/286 (4%)
Query: 84 NPNKYHHTTPCYTAITDVLLSHSLI----SIAASLLKNSNKLSDFFISKLIKAYGDRGNV 139
NPN Y Y + D L + S+ A +LK K S L+ Y V
Sbjct: 266 NPNVY-----TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320
Query: 140 KAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTT 199
K A F+ + +++Y L+ + + A F ++ ++N+VP + TY++
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP-GIVTYSS 379
Query: 200 MIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
+I G CK G I + D M + +++ Y+++I+G CK G L+ A N+M ++
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
RPN T+ ++ GLC GR+ +A+ + + G+ NV T+ M+ G C G ++A+
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
L + + P+ ++E +I K ++D+A LL++M ARGL
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 36/243 (14%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P ++ +N +++ F K A + + +G +P+ +T N +I C G++ +
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+AK+ G+ + T +++KGLC+ G+ +A+ + ++ + SY +ING CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
IG + AI L+++ R KP V V
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDV-----------------------------------VM 201
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YNTII +C + + + L M G + D Y+ L+ G+C G ++ + + +EM
Sbjct: 202 YNTIIDAMCKYQ-LVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEM 260
Query: 464 VTK 466
V K
Sbjct: 261 VLK 263
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 174/356 (48%), Gaps = 40/356 (11%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
F K +E + +YN+LL L R ++ A F +++ DV ++ ++ G C
Sbjct: 33 FEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR--SHDVISFNILVTGLC 90
Query: 206 KMGMIENAKKVFDVMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL- 262
+ G IE A + F M + PN++ Y+ +I+G CK + +A + + M RGC P+ +
Sbjct: 91 RAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVIT 150
Query: 263 ----------------------------------TYNAMIYGLCINGRVDEAKMLMAKMR 288
TYN++++GLC RV +A LM M
Sbjct: 151 YTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMT 210
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G NV T+ +++ GLC VG+ A L ++++ PD+ Y ++ING CK + D
Sbjct: 211 CRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVD 270
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
E+I+LL+ + G+KP V ++++V L + LD A LL + C P+ + Y+T+I
Sbjct: 271 ESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLI 330
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
GLC A G++ + DL + M G + D YS L+ G C+ G V+ + MV
Sbjct: 331 DGLCKA-GKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMV 385
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 198/385 (51%), Gaps = 16/385 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQI 152
Y+ + D L + +S A LL++ + S I+ I G K A W + +
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 175
Query: 153 ENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ G L +YNSLL L R + A + P +V TY T+I G CK+G +
Sbjct: 176 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTP-NVVTYGTLIDGLCKVGRV 234
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
++A + M K P+L+ YN +ING CK +++E+ + ++ G +P+ +TY+++
Sbjct: 235 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 294
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
IYGLC + R+DEA L+ ++ G +V + +++ GLC GK D+A +
Sbjct: 295 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGC 354
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ DV +Y +I+G CK G+ DEA LL M G P+ ++N++ + L + LD AI
Sbjct: 355 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 414
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE----DLVDRMIRSGHNLDFTMYSCL 443
L+++M + +C P+ V+YN +I G+C RM+ V+ D MI +G D YS L
Sbjct: 415 LVEEMERSNCAPSAVTYNILIHGMC----RMERVDSAALDYFQEMIDNGVIPDHITYSIL 470
Query: 444 LKGYCEEGNVENVMQIAHEMVTKKG 468
L+G + ++ + + + + + G
Sbjct: 471 LEGLKKSKDLHELRHLVLDQMVQLG 495
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 154/285 (54%), Gaps = 8/285 (2%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGE 241
++++ P+V TY ++I G CK + A+++F+ M P+++ YNT+++G + G+
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 242 LEEAKKCMNEMMNRGCRPNE-LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
LE A EM++R R ++ +++N ++ GLC G+++ A KM + NV T+
Sbjct: 61 LERAMALFQEMLDR--RSHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYS 117
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ GLC + QAV L ++ +PDV +Y ++++G CK K A +L+EM
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G P + ++N++ L + A+ L++ M C PN V+Y T+I GLC GR++D
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKV-GRVKD 236
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
++ MI G D +Y+ L+ G C+ V+ + + V+
Sbjct: 237 ACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 281
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 139/246 (56%), Gaps = 3/246 (1%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+PN++ YN++I+G CK E + A++ M + C P+ +TYN ++ GL G+++ A
Sbjct: 7 EPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMA 66
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M L+ +V + ++ GLC GK + A+ + R M+ +P+V +Y V+I+G C
Sbjct: 67 LFQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFRK-MDDRCSPNVITYSVLIDGLC 124
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K + +A+ LL+ M+ARG P V ++ + L + ++ A +L++M C+PN V
Sbjct: 125 KANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLV 184
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YN+++ GLC A+ R+ D L+ M G + Y L+ G C+ G V++ + +
Sbjct: 185 TYNSLLHGLCRAR-RVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 243
Query: 463 MVTKKG 468
M+ K G
Sbjct: 244 MIDKGG 249
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 204/413 (49%), Gaps = 28/413 (6%)
Query: 68 PYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----KNSN---K 120
P L FF+W SN + H + + + L +++A + L + SN K
Sbjct: 81 PADGLRFFDWVSNKG-----FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVK 135
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
L D + + LI++YG+ G + ++ F KQ+ + ++NSLL +L++ +A +
Sbjct: 136 LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDL 195
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFC 237
F ++ + V PD T+ T+I G+CK M++ A ++F M + P+++ YNT+I+G C
Sbjct: 196 FDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLC 255
Query: 238 KKGELEEAKKCMNEMMNRGC--RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
+ G+++ A ++ M+ + PN ++Y ++ G C+ +DEA ++ M G K N
Sbjct: 256 RAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPN 315
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEA--NMNPDVKSYEVVINGFCKIGKSDEAISL 353
T+ +++KGL ++D+ L +A PD ++ ++I C G D A+ +
Sbjct: 316 AVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKV 375
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM-------DCLPNFVSYNT 406
+EM L P S++ + R L E DRA L ++ + +C P +YN
Sbjct: 376 FQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNP 435
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ LC A G+ + E + ++++ G D Y L+ G+C EG + ++
Sbjct: 436 MFEYLC-ANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYEL 486
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 133/305 (43%), Gaps = 51/305 (16%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+YN+++ L R +K+A ++K+ V P+V +YTT++RGYC I+ A VF
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 219 VMT---VKPNLLAYNTMINGF-------------------------------------CK 238
M +KPN + YNT+I G C
Sbjct: 306 DMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCD 365
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM----AKMRLNGFKD 294
G L+ A K EM+N P+ +Y+ +I LC+ D A+ L K L G KD
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLG-KD 424
Query: 295 N----VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
+ + M + LC GK QA R +M+ + D SY+ +I G C+ GK A
Sbjct: 425 ECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPA 483
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
LL M R P + ++ + L++ GE A L++M + LP ++++++
Sbjct: 484 YELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAE 543
Query: 411 LCMAK 415
L K
Sbjct: 544 LAKRK 548
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 143/310 (46%), Gaps = 31/310 (10%)
Query: 89 HHTTP---CYTAITDVLLSHSLISIA----ASLLKNSNKLSDFFIS--KLIKAYGDRGNV 139
+H P Y I D L + IA + +LK + + +S L++ Y + +
Sbjct: 238 YHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEI 297
Query: 140 KAAIFWFHQ--AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN----VVPPD 193
A+ FH ++ ++ A +YN+L+ L + +E ++ N PD
Sbjct: 298 DEAVLVFHDMLSRGLKPNAV--TYNTLIKGLSEAHRY---DEIKDILIGGNDAFTTFAPD 352
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
T+ +I+ +C G ++ A KVF M + P+ +Y+ +I C + E + A+ N
Sbjct: 353 ACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFN 412
Query: 251 EMMNRG-------CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
E+ + C+P YN M LC NG+ +A+ + ++ G +D S +K+++
Sbjct: 413 ELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPS-YKTLI 471
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C GKF A L ++ PD+++YE++I+G KIG++ A L+ M
Sbjct: 472 TGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYL 531
Query: 364 PTVFSFNAVF 373
P +F++V
Sbjct: 532 PVATTFHSVL 541
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 37/237 (15%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN + L K AE+ F Q++K V P +Y T+I G+C+ G + A ++ +
Sbjct: 432 AYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP--PSYKTLITGHCREGKFKPAYELLVL 489
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+L Y +I+G K GE A + M+ P T+++++ L
Sbjct: 490 MLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKF 549
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSML----------KGLCVVG---------KFDQAVG 317
+E+ L+ M + N+ ++ K +V K ++ +G
Sbjct: 550 ANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLG 609
Query: 318 YL---RNVMEAN----------MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
YL R +++A+ D+ + VI G CK + EA SL E+ G
Sbjct: 610 YLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 165/311 (53%), Gaps = 8/311 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+++ LL L R N ++ A + ++ KE PD + Y +I GY K A K
Sbjct: 11 FTFAILLRGLCRSNQLEKARQLLGRM-KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLA 69
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M P ++ Y +++G CK G ++A K ++EM ++GC PN TYN ++ GLC
Sbjct: 70 EMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEER 129
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++DEAK ++ +M + G+ +V T+ S +KGLC + D+A +L + + PDV SY
Sbjct: 130 KLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYT 186
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
VING CK G D A +L +M RG P V +++++ + GE++RA+ LL M ++
Sbjct: 187 TVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL 246
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C PN V+YN+++ G G + ED++ M R G D Y+ + G C+ V+
Sbjct: 247 GCRPNMVAYNSLL-GALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKK 305
Query: 456 VMQIAHEMVTK 466
+ MV +
Sbjct: 306 AKAVFDRMVER 316
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 201/435 (46%), Gaps = 13/435 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P+ Y+ Y+ D + + A ++KN + + ++ G K A
Sbjct: 43 PDDAIYNALISGYSKAKDFGQAFKFL---AEMVKNHCLPTVVTYTNIVDGLCKAGRTKDA 99
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ + + +Y+YN ++ L + A++ ++ P DV TY + I+
Sbjct: 100 VKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP-DVVTYNSFIK 158
Query: 203 GYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
G CK ++ A+K M V P++++Y T+ING CK G+L+ A + +++M NRGC P+ +
Sbjct: 159 GLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVV 218
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
TY+++I G C G V+ A L+ M G + N+ + S+L L +G +A L +
Sbjct: 219 TYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM 278
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
PDV SY I+G CK + +A ++ M RG P S++ + L + EL
Sbjct: 279 ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKEL 338
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG-HNLDFTMYS 441
D AI L++Q + + + + Y ++ GLC GR + L +++ D Y+
Sbjct: 339 DDAITLVEQAREKYQIVDILLYTVLLDGLCKG-GRFDEACALFSKVLDEKICEPDVFFYN 397
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLT-------RVVDALLLMWIVTGGS 494
+L +C+ ++ +QI +M+ + + N L R+ DA ++ +
Sbjct: 398 VMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEG 457
Query: 495 WISRFVFVHQVVVIM 509
+I FV +V M
Sbjct: 458 FIPDFVTYGTLVDAM 472
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 175/344 (50%), Gaps = 45/344 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS + L + + + A +F ++ V PDV +YTT+I G CK G +++A ++ D
Sbjct: 152 TYNSFIKGLCKCDRVDEARKFLARMP----VTPDVVSYTTVINGLCKSGDLDSASRMLDQ 207
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI-------- 268
MT + P+++ Y+++I+GFCK GE+E A ++ M+ GCRPN + YN+++
Sbjct: 208 MTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGH 267
Query: 269 ----------------------YGLCING-----RVDEAKMLMAKMRLNGFKDNVSTHKS 301
Y CI+G RV +AK + +M G N S++
Sbjct: 268 IGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSM 327
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL-KEMRAR 360
+++ LC + D A+ + E D+ Y V+++G CK G+ DEA +L K + +
Sbjct: 328 LVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEK 387
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+P VF +N + + ++D+A+ + KQM + +C N V++N ++ GLC+ R+ D
Sbjct: 388 ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCV-DDRLSD 445
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
E ++ M+ G DF Y L+ C+ G +++ E V
Sbjct: 446 AETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAV 489
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 128/244 (52%), Gaps = 4/244 (1%)
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
+ +P+ + ++ G C+ +LE+A++ + M GC P++ YNA+I G +A
Sbjct: 5 SCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQA 64
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+A+M N V T+ +++ GLC G+ AV L + + +P++ +Y V++ G
Sbjct: 65 FKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEG 124
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
C+ K DEA +L+EM RG P V ++N+ + L + +D A L +MP P+
Sbjct: 125 LCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PD 181
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
VSY T+I GLC + G + ++D+M G D YS L+ G+C+ G VE M +
Sbjct: 182 VVSYTTVINGLCKS-GDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240
Query: 461 HEMV 464
M+
Sbjct: 241 DSML 244
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 146/308 (47%), Gaps = 13/308 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
SY+ L+ L + + A Q +E D+ YT ++ G CK G + A K
Sbjct: 324 SYSMLVEELCKKKELDDAITLVEQ-AREKYQIVDILLYTVLLDGLCKGGRFDEACALFSK 382
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
V D +P++ YN M++ CK+ ++++A + +M+ R C N +T+N +++GLC++
Sbjct: 383 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDD 441
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R+ +A+ ++ M GF + T+ +++ +C GK A+ ++ PDV +Y
Sbjct: 442 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 501
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I G ++EA L ++ V +NA+ ENG D + L ++ +
Sbjct: 502 ALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIES 554
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
D PN ++ I G + + L DR ++ G D + + L+ + + G++E
Sbjct: 555 DVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEE 614
Query: 456 VMQIAHEM 463
+I + M
Sbjct: 615 ARRIFYSM 622
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 107/298 (35%), Gaps = 66/298 (22%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L++ + + AI QA++ + Y LL L + A F +++
Sbjct: 326 SMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLD 385
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----------------------- 223
E + PDV Y M+ +CK I+ A ++ M +
Sbjct: 386 EKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSD 445
Query: 224 --------------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
P+ + Y T+++ CK G+ A + E + GC P+ +TY+A+I
Sbjct: 446 AETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALIT 505
Query: 270 GLCINGRVDEAKMLMAKMRL------------NGFKD----------------NVSTHKS 301
GL +EA +L K+ + NG D N T
Sbjct: 506 GLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGK 565
Query: 302 MLKGLCVVGK-FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ G V + +A G ++ PD+ +I+ F K G +EA + M+
Sbjct: 566 EISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMK 623
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 149/275 (54%), Gaps = 1/275 (0%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
PDV +Y M+ GYC G ++NA+++ M ++P+ YNT+I G C +G + A +++
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDD 177
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ RGC P+ +TY ++ C +A L+ +MR G ++ T+ ++ G+C G+
Sbjct: 178 MLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGR 237
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A+ +L+++ P+ SY +V+ G C + ++A L+ EM +G P V +FN
Sbjct: 238 VDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNM 297
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L G ++ A+ +L Q+P+ C PN +SYN I+ C K +M V+ M+ S
Sbjct: 298 LISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQK-KMDRAMAFVELMVSS 356
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G D Y+ LL C G V+ +++ H++ K
Sbjct: 357 GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 391
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 162/303 (53%), Gaps = 5/303 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN+L+ L A +++ VP DV TYT ++ CK + A K+ D
Sbjct: 153 YTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVP-DVVTYTILLEATCKRSGYKQAVKLLD 211
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P+++ YN ++NG C++G +++A + + + + GC PN ++YN ++ GLC
Sbjct: 212 EMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAE 271
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R ++A+ LMA+M G NV T ++ LC G + A+ L + + P+ SY
Sbjct: 272 RWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYN 331
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++ FCK K D A++ ++ M + G P + S+N + L GE+D A+ LL Q+
Sbjct: 332 PILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 391
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C P +SYNT+I GL A G+ ++ +L++ M+ G D YS + G C EG +E
Sbjct: 392 GCTPVLISYNTVIDGLTKA-GKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEE 450
Query: 456 VMQ 458
++
Sbjct: 451 AIK 453
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 174/341 (51%), Gaps = 5/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L++A R K A+ + + + +YN ++ + + + A EF +
Sbjct: 193 LLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYG 252
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P VS Y +++G C E+A+K+ M+ K PN++ +N +I+ C++G +E A
Sbjct: 253 CEPNTVS-YNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPA 311
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++++ GC PN L+YN +++ C ++D A + M +G ++ ++ ++L
Sbjct: 312 MEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTA 371
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ D AV L + + P + SY VI+G K GK++EA+ LL EM +GL+P
Sbjct: 372 LCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPD 431
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +++ + L G ++ AI ++ M PN V YN I+ GLC + + DL
Sbjct: 432 IITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAI-DLF 490
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M+ +G + + Y+ L++G EG V+ ++ E+ ++
Sbjct: 491 TYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSR 531
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 148/285 (51%), Gaps = 11/285 (3%)
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-VKPNLLA-YNTMINGFCK 238
+ V N VP + +R + G +E A ++ + M ++P+ +I C
Sbjct: 43 YAGAVAPNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGLEPSAAGPCAALIKKLCA 102
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G EA++ + C P+ ++YNAM+ G C+ G++D A+ L+A M + + + T
Sbjct: 103 SGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPM---EPDTYT 154
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ ++++GLC G+ D A+ L +++ PDV +Y +++ CK +A+ LL EMR
Sbjct: 155 YNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+G P + ++N V + + G +D A+ LK +P C PN VSYN ++ GLC A+ R
Sbjct: 215 DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAE-RW 273
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+D E L+ M R G + ++ L+ C G VE M+I ++
Sbjct: 274 EDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQI 318
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 4/244 (1%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG V+ A+ Q + SYN +L + + A F +V P D+
Sbjct: 305 RGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYP-DIV 363
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
+Y T++ C+ G ++ A ++ + K P L++YNT+I+G K G+ EEA + +NEM
Sbjct: 364 SYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEM 423
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ +G +P+ +TY+ + GLC GR++EA K++ G + N + ++L GLC
Sbjct: 424 VTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRAT 483
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
A+ ++ P+ +Y ++I G G EA ++ E+ +RG+
Sbjct: 484 HSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGA 543
Query: 373 FRIL 376
R+L
Sbjct: 544 IRLL 547
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 181/381 (47%), Gaps = 43/381 (11%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ +KLI+ RG A A++ +++YN+L+ R + A +
Sbjct: 110 YLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA----RR 165
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKG 240
++ V PD TYT +IRG C G + A + D M +P+++ Y ++ CK
Sbjct: 166 LIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKST 225
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+A + ++EM +GC PN +TYN +I G+C GRVD+A+ + ++ GF+ + ++
Sbjct: 226 GFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYT 285
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE------------------------- 335
++LKGLC +++ +ME N P+ +++
Sbjct: 286 TVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 345
Query: 336 ----------VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+VIN CK G+ D+A L M + G P S+ V + L + A
Sbjct: 346 GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 405
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
LLK+M + +C PN V++NT IC LC KG ++ L+++M G ++ Y+ L+
Sbjct: 406 KELLKEMVRKNCPPNEVTFNTFICILCQ-KGLIEQATMLIEQMSEHGCEVNIVTYNALVN 464
Query: 446 GYCEEGNVENVMQIAHEMVTK 466
G+C +G V++ +++ + M K
Sbjct: 465 GFCVQGRVDSALELFYSMPCK 485
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 170/346 (49%), Gaps = 8/346 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + +I+ DRG V A+ + +Y LL + + A E +
Sbjct: 177 YTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDE 236
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ + P ++ TY +I G C+ G +++A++ + ++ +P+ ++Y T++ G C
Sbjct: 237 MRAKGCTP-NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 295
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
E+ ++ EMM + C PNE+T++ ++ C G V+ A ++ +M +G N +
Sbjct: 296 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 355
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ +C G+ D A +L N+ +PD SY V+ G C+ + ++A LLKEM +
Sbjct: 356 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 415
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
P +FN IL + G +++A +L++QM + C N V+YN ++ G C+ +GR+
Sbjct: 416 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCV-QGRVDS 474
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L M + + +T LL G C ++ ++ EM+ K
Sbjct: 475 ALELFYSMPCKPNTITYTT---LLTGLCNAERLDAAAELLAEMLQK 517
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 140/310 (45%), Gaps = 36/310 (11%)
Query: 192 PDVSTYTTMIRG-----------------------------------YCKMGMIENAKKV 216
PDV T +IR YC+ G ++ A+++
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 166
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+ Y +I G C +G + EA +++M++RGC+P+ +TY ++ +C +
Sbjct: 167 IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 226
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+A ++ +MR G N+ T+ ++ G+C G+ D A +L + PD SY
Sbjct: 227 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 286
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
V+ G C + ++ L EM + P +F+ + R G ++RAI +L+QM
Sbjct: 287 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 346
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C N N +I +C +GR+ D ++ M G + D Y+ +LKG C E+
Sbjct: 347 CAANTTLCNIVINTIC-KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 405
Query: 457 MQIAHEMVTK 466
++ EMV K
Sbjct: 406 KELLKEMVRK 415
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 141/273 (51%), Gaps = 2/273 (0%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+ + +L + I+ A Q+ E+ ++ TY ++ G+C G +++A ++F
Sbjct: 423 TFNTFICILCQKGLIEQATMLIEQM-SEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 481
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M KPN + Y T++ G C L+ A + + EM+ + C PN +T+N ++ C G +DE
Sbjct: 482 MPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDE 541
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L+ +M +G N+ T+ ++L G+ ++A+ L ++ ++PD+ +Y +I
Sbjct: 542 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 601
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
+ + +EAI + ++ G++P +N + L + D AI M C+P
Sbjct: 602 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMP 661
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
N ++Y T+I GL + +++ DL+ + G
Sbjct: 662 NELTYITLIEGL-ANEDFLKETRDLLRELCSRG 693
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 4/222 (1%)
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + ++ +RG P+ +I LC GR +A ++ +G +V + +++
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C G+ D A R + + PD +Y +I G C G+ EA+SLL +M RG +P
Sbjct: 153 GYCRYGQLDAA---RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+V ++ + + ++ +A+ +L +M C PN V+YN II G+C +GR+ D +
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCR-EGRVDDAREF 268
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++R+ G D Y+ +LKG C E+V ++ EM+ K
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 310
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 116/237 (48%), Gaps = 7/237 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + +G V +A+ F+ N +Y +LL L + A E ++++++
Sbjct: 462 LVNGFCVQGRVDSALELFYSMPCKPN---TITYTTLLTGLCNAERLDAAAELLAEMLQKD 518
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P +V T+ ++ +C+ G+++ A ++ + M PNL+ YNT+++G K EEA
Sbjct: 519 CAP-NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEA 577
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ +++ G P+ +TY+++I L RV+EA + ++ G + + +L
Sbjct: 578 LELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLA 637
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
LC D A+ + ++ P+ +Y +I G E LL+E+ +RG+
Sbjct: 638 LCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
S A L+ +RG P V+ + R L G A +L+ + + +YNT
Sbjct: 90 SPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 149
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ G C G++ L+ M + D Y+ +++G C+ G V + + +M+ +
Sbjct: 150 LVAGYCR-YGQLDAARRLIASMPVAP---DAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 205
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 202/443 (45%), Gaps = 46/443 (10%)
Query: 63 YEQTNPYH-ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKL 121
+ P+H A +PN PN A D+ + L+ ++AS ++
Sbjct: 16 FPNPKPHHLAAAAATRPESPNVAPNPASARLRRLIAREDLAGAARLVELSAS--RDGEAP 73
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
+ +KLI+ RG A A+ + +++YN+L+ R + A
Sbjct: 74 DVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA---- 129
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCK 238
+++ V PD TYT +IR C G + +A + D M +PN++ Y ++ CK
Sbjct: 130 RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK 189
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
E+A ++EM +GC PN +TYN +I G+C GRVD+A+ L+ ++ G + + +
Sbjct: 190 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVS 249
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE----------------------- 335
+ ++LKGLC ++D +ME N P+ +++
Sbjct: 250 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMT 309
Query: 336 ------------VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+VIN CK G+ D+A L M + G P S+ V + L +
Sbjct: 310 EHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWN 369
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A LLK+M + +C PN V++NT IC LC KG ++ L+++M G + Y+ L
Sbjct: 370 DAKELLKEMVRNNCPPNEVTFNTFICILCQ-KGLIEQAIMLIEQMQEHGCTVGVVTYNAL 428
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+ G+C +G++++ +++ M K
Sbjct: 429 VNGFCVQGHIDSALELFRSMPCK 451
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 142/273 (52%), Gaps = 2/273 (0%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+ + +L + I+ A Q+ +E+ V TY ++ G+C G I++A ++F
Sbjct: 389 TFNTFICILCQKGLIEQAIMLIEQM-QEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS 447
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M KPN + Y T++ G C L+ A + + EM++R C PN +T+N ++ C G +DE
Sbjct: 448 MPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDE 507
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L+ +M +G N+ T+ ++ G+ + A+ L ++ ++PDV ++ +I
Sbjct: 508 AIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIG 567
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
K + +EAI + + G++P +N + L + E+D AI L M C+P
Sbjct: 568 ILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMP 627
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
N +Y +I GL +G +++ +DL+ + G
Sbjct: 628 NESTYIILIEGL-AREGLLKEAQDLLSMLCSRG 659
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 118/237 (49%), Gaps = 7/237 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + +G++ +A+ F N +Y +LL L + A E +++ +
Sbjct: 428 LVNGFCVQGHIDSALELFRSMPCKPN---TITYTTLLTGLCNAERLDAAAELVAEMLHRD 484
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
PP+V T+ ++ +C+ G ++ A ++ + M PNL+ YNT+ +G K E+A
Sbjct: 485 C-PPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDA 543
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ ++++G P+ +T++++I L RV+EA + + G + + +L G
Sbjct: 544 LELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLG 603
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
LC + D A+ +L ++ P+ +Y ++I G + G EA LL + +RG+
Sbjct: 604 LCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 173/345 (50%), Gaps = 38/345 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP--------------------------- 191
Y+Y S++G+L R+ + AEE F +++ + ++P
Sbjct: 740 YTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYE 799
Query: 192 -------PDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGE 241
PDV TYT +I G+C++G + A K+F M ++P+++ + ++NG+CK G
Sbjct: 800 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGH 859
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+++A + N M+ GC PN +TY +I GLC G +D A L+ +M G + N+ T+ S
Sbjct: 860 IKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 919
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GLC G ++AV + A +N D +Y +++ +CK G+ D+A +L EM +G
Sbjct: 920 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+PT+ +FN + +G L+ LL M PN ++N ++ C+ + ++
Sbjct: 980 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCI-RNNLKAA 1038
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M G D Y L+KG+C N++ + EM K
Sbjct: 1039 TAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGK 1083
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 174/347 (50%), Gaps = 12/347 (3%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFH 182
++++L K D AI F + ++ G C + SYN ++ + ++ I A
Sbjct: 639 YLARLSK---DCNKTATAIIVFREFPEV--GVCWNVASYNIVIHFVCQLGRINEAHHLL- 692
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
+++ PDV +Y+T+I GYC+ G ++ K+ + M +KPN Y ++I C+
Sbjct: 693 LLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRI 752
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+L EA++ +EM+ +G P+ + Y ++ G C G + A +M +V T+
Sbjct: 753 CKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 812
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C +G +A ++ + PD+ ++ ++NG+CK G +A + M
Sbjct: 813 TAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQ 872
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G P V ++ + L + G+LD A LL +M ++ PN +YN+I+ GLC + G ++
Sbjct: 873 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS-GNIE 931
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ LV +G N D Y+ L+ YC+ G ++ +I EM+ K
Sbjct: 932 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGK 978
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 138/270 (51%), Gaps = 4/270 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
++L+ Y G++K A + Q + +Y +L+ L + + A E H++
Sbjct: 847 FTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 906
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGEL 242
K + P++ TY +++ G CK G IE A K+ F+ + + + Y T+++ +CK GE+
Sbjct: 907 KIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 965
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A++ + EM+ +G +P +T+N ++ G C++G +++ + L+ M G N +T +
Sbjct: 966 DKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCL 1025
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+K C+ A +++ + PD K+YE ++ G C EA L +EM+ +G
Sbjct: 1026 VKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGF 1085
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQM 392
+V +++ + + + + A + QM
Sbjct: 1086 SVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 158/347 (45%), Gaps = 38/347 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+ + RG+++AA +F++ + + +Y +++ ++ + A + FH+++
Sbjct: 778 TTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLC 837
Query: 187 ENVVP----------------------------------PDVSTYTTMIRGYCKMGMIEN 212
+ P P+V TYTT+I G CK G +++
Sbjct: 838 RGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 897
Query: 213 AKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
A ++ M ++PN+ YN+++NG CK G +EEA K + E G + +TY ++
Sbjct: 898 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 957
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
C +G +D+A+ ++ +M G + + T ++ G C+ G + L ++ + P
Sbjct: 958 AYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1017
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+ ++ ++ +C A ++ K+M +RG++P ++ + + + A L
Sbjct: 1018 NATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLF 1077
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
++M + +Y+ +I G + + + ++ D+M R G D
Sbjct: 1078 QEMKGKGFSVSVSTYSVLIKGF-FKRKKFVEAREIFDQMRRDGLAAD 1123
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 58/333 (17%)
Query: 157 CLYSYNSLLGVLVRVN-SIKLAEEFFHQ--------------IVKENVVPPDVSTYTTMI 201
C + + L+ VL+++ +L +FF ++ V D+ ++I
Sbjct: 506 CKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLI 565
Query: 202 RGYC---KMGMIENAKKVFDVMTVK-----PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ K+ + E+ + FD++ + ++ + G L EA+K +M+
Sbjct: 566 SSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKML 625
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
N YGL ++ VD + +A++ KD K
Sbjct: 626 N--------------YGLVLS--VDSCNVYLARLS----KD--------------CNKTA 651
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A+ R E + +V SY +VI+ C++G+ +EA LL M +G P V S++ V
Sbjct: 652 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVI 711
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
GELD+ L+++M Q PN +Y +II LC ++ + E+ MI G
Sbjct: 712 NGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRI-CKLAEAEEAFSEMIGQGI 770
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D +Y+ L+ G+C+ G++ + +EM ++
Sbjct: 771 LPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSR 803
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 177/338 (52%), Gaps = 21/338 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI ++ G ++ A WF + + + + +Y +LL ++ + A + FH++V +
Sbjct: 493 LIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMV-DA 551
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF-------------------DVMTVKPNLLAY 229
P+ TY+ +I G CK G I+ A +V+ D T+ PN++ Y
Sbjct: 552 ACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTY 611
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+I+G CK ++ +A + ++ M+ GC PN++ Y+A+I G C G++D A+ + +M
Sbjct: 612 GALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTK 671
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G+ +V T+ S++ + G+ D A+ L ++ + NP+V +Y +I+G K+G+ ++
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEK 731
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A++LL M +G P V ++ A+ L + G+ D ++ L KQM C PN+V+Y +I
Sbjct: 732 ALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLI- 790
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
C A G + + L+D M + Y C ++G+
Sbjct: 791 NHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF 828
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 158/330 (47%), Gaps = 31/330 (9%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +LL ++ + + ++ E P+ S + +++ GYC G A K+F+
Sbjct: 308 TYRTLLSGFLKKKQFGWCKRIINMMMTEGC-NPNPSLFNSLVHGYCNAGDYAYAYKLFNR 366
Query: 220 MTV---KPNLLAYNTMINGFCKKGELEEAK------KCMNEMMNRGCRPNELTYNAMIYG 270
MT P +AYN I C + EL A+ K EM+ C N++
Sbjct: 367 MTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRC 426
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC G+ ++A ++ +M GF + ST+ ++ LC K +++ + + A +NPD
Sbjct: 427 LCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPD 486
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V +Y ++I+ FCK G ++A S EMR+ G P V ++ A+ +++ +L +A +
Sbjct: 487 VYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFH 546
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL--DF----------- 437
+M C PN V+Y+ +I GLC A G +Q ++ +++I + N+ DF
Sbjct: 547 RMVDAACYPNAVTYSALIDGLCKA-GEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIA 605
Query: 438 ---TMYSCLLKGYCEEGNVENVMQIAHEMV 464
Y L+ G C+ V + AHE++
Sbjct: 606 PNVVTYGALIDGLCKAQKVSD----AHELL 631
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 173/370 (46%), Gaps = 42/370 (11%)
Query: 131 KAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVV 190
K G GNV++ F+F + +Y +L+ L + + A E ++
Sbjct: 582 KLIGTSGNVESD-FYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCE 640
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKK 247
P + Y +I G+CK+G I+NA++VF MT P++ Y ++I+ K G L+ A K
Sbjct: 641 PNQI-VYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
++EM+N C PN +TY AMI GL G +++A L++ M G NV T+ +++ GL
Sbjct: 700 VLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLG 759
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA-------R 360
GK D ++ + + P+ +Y V+IN C G DEA LL EM+ +
Sbjct: 760 KTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQ 819
Query: 361 GLKPTVFSFN----------------------AVFRILVEN----GELDRAILLLKQMPQ 394
G V F+ V+ +L+++ G L+ A+ L K++ +
Sbjct: 820 GYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVE 879
Query: 395 MDCLPNFVS---YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ N S Y ++I LC+A ++++ L M R G D ++ L+KG E
Sbjct: 880 VSSSLNMTSTGMYASLIQALCLAS-QVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVN 938
Query: 452 NVENVMQIAH 461
+ +Q+ +
Sbjct: 939 KWDEALQLCY 948
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 160/443 (36%), Gaps = 51/443 (11%)
Query: 67 NPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----NSNKLS 122
+P + FF WA Y HT CY A+ ++L A LL+ + ++
Sbjct: 113 SPELCVRFFLWAERQV----GYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVL 168
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
++ L++ G A+ + K +YN+L+ VL +++
Sbjct: 169 RRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQK 228
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGEL 242
++ D ST + CK+G +A + + + + MI+G +
Sbjct: 229 EMSASGFCM-DRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLF 287
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA ++ M C PN +TY ++ G + K ++ M G N S S+
Sbjct: 288 NEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSL 347
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING---------------------- 340
+ G C G + A + P +Y + I
Sbjct: 348 VHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEE 407
Query: 341 -------------------FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
C +GK ++A +LKEM +G P ++ V L + +
Sbjct: 408 MLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKK 467
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
++++ LL ++M + P+ +Y +I C A G ++ D M G + + Y+
Sbjct: 468 VEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKA-GLIEQARSWFDEMRSVGCSPNVVTYT 526
Query: 442 CLLKGYCEEGNVENVMQIAHEMV 464
LL Y + + I H MV
Sbjct: 527 ALLHAYLKSKQLIQAHDIFHRMV 549
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 108/251 (43%), Gaps = 26/251 (10%)
Query: 80 NPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGD 135
N + NPN YTA+ D L I A +LL + + + LI G
Sbjct: 706 NDSCNPN-----VVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGK 760
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE--FFHQIVKENVVPPD 193
G A++ F KQ+ + C +Y + ++ + L +E +K P
Sbjct: 761 TGKADASLKLF---KQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKH 817
Query: 194 VSTYTTMIRGYCK-----MGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
+ Y ++G+ K +G++E + + + + P Y +I+ F K G LE A +
Sbjct: 818 LQGYHCAVQGFSKKFIASLGLLEEMES-HETVPIAP---VYGMLIDSFSKAGRLETALEL 873
Query: 249 MNEMMNRGCRPNELT---YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
E++ N + Y ++I LC+ +V+EA L +M G ++ S++KG
Sbjct: 874 HKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKG 933
Query: 306 LCVVGKFDQAV 316
L V K+D+A+
Sbjct: 934 LIEVNKWDEAL 944
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 163/295 (55%), Gaps = 5/295 (1%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N LL L+R ++++L + ++ + PDV TY+T I +CK + AKKVF+ M
Sbjct: 212 NGLLKDLLRADAMELLWKL-KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMR 270
Query: 222 VKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ N + YN MI+G C+ G +EEA EM++ G P+ TY A++ GLC R+
Sbjct: 271 RRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLK 330
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EAK L+ +M +G K N+ + +++ G GK +A L+ ++ A + P+ Y+ +I
Sbjct: 331 EAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLI 390
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
G CKIG+ A LLKEM GL+P F++N + + + + D A LL +M L
Sbjct: 391 RGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGIL 450
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
PN SY +I GLC G ++ +L++ MI G + MY+ L+ G+ +EGN+
Sbjct: 451 PNVYSYGIMINGLCQ-NGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNI 504
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 191/356 (53%), Gaps = 6/356 (1%)
Query: 113 SLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
++ + L D + S I+A+ + AA F + ++ + +YN ++ L R
Sbjct: 232 GFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRS 291
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
+++ A F ++V + PD TY ++ G CK ++ AK + D M+ +KPN++
Sbjct: 292 GAVEEAFGFKEEMVDYGL-SPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y T+++GF K+G+ EA + EM++ G +PN++ Y+ +I GLC G++ A L+ +M
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G + + T+ +++G D A L + + + P+V SY ++ING C+ G+S
Sbjct: 411 KVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESK 470
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
EA +LL+EM + GLKP F + + + G + A L++M + + P+ YN++I
Sbjct: 471 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLI 530
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
GL GRM++ E+ ++ + G D YS L+ GYC+ GN+E Q+ +M+
Sbjct: 531 KGLSTV-GRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQML 585
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 211/469 (44%), Gaps = 34/469 (7%)
Query: 6 RSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQ 65
R L I Q+ S L+ + V R P + PL Q ++Q
Sbjct: 391 RGLCKIGQLGRASKLLKEMIKVGLR-------PDTFTYNPLMQGH------------FQQ 431
Query: 66 TNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN----SNKL 121
+ A N N PN Y Y + + L + A +LL+ K
Sbjct: 432 HDKDGAFELLNEMRNSGILPNVYS-----YGIMINGLCQNGESKEAGNLLEEMISEGLKP 486
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
+ F + LI + GN+ A + + L+ YNSL+ L V ++ AEE++
Sbjct: 487 NAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYY 546
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCK 238
Q+ K +VP D TY+ +I GYCK G +E A ++ M +KPN Y ++ G+ K
Sbjct: 547 AQVQKRGLVP-DEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFK 605
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ E+ + M+ G +P+ Y +I L + ++ A M++ ++ NG ++
Sbjct: 606 SNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHI 665
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ S++ GLC + ++AVG L + + + P + Y +I+GFC+ G A ++ +
Sbjct: 666 YSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSIL 725
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
A+GL P ++ A+ +NG++ A L K+M P+ YN + G C +
Sbjct: 726 AKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATG-CSDAADL 784
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ L + M G+ + ++++ L+ G+C+ G ++ ++ H M+ ++
Sbjct: 785 EQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDRE 832
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 10/300 (3%)
Query: 175 KLAEEFFHQIVKENV---VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
K AE F I+KE + V P+ Y +IRG CK+G + A K+ M ++P+
Sbjct: 363 KTAEAF--DILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFT 420
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YN ++ G ++ + + A + +NEM N G PN +Y MI GLC NG EA L+ +M
Sbjct: 421 YNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMI 480
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G K N + ++ G G A L + +AN++PD+ Y +I G +G+ +
Sbjct: 481 SEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRME 540
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
EA +++ RGL P F+++ + + G L++A LL+QM PN +Y ++
Sbjct: 541 EAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLL 600
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
G + V ++ M+ SG D +Y +++ N+E + E V K G
Sbjct: 601 EGY-FKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE-VEKNG 658
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 4/275 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
P + ++ Y K G + NA +V +M + P N ++ + +E K
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M G P+ TY+ I C D AK + +MR N T+ M+ GLC
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G ++A G+ +++ ++PD +Y ++NG CK + EA +LL EM GLKP +
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ + ++ G+ A +LK+M PN + Y+ +I GLC G++ L+ M
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKI-GQLGRASKLLKEM 409
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
I+ G D Y+ L++G+ ++ + + ++ +EM
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM 444
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 144/308 (46%), Gaps = 13/308 (4%)
Query: 79 SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGN 138
S PN + Y Y D + SI S+L + +K + +I+ N
Sbjct: 587 SGLKPNADTYTDLLEGYFKSNDY---EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN 643
Query: 139 VKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
++ A + ++ NG L+ Y+SL+ L ++ ++ A ++ KE + P +
Sbjct: 644 MEVAFMVLTEVEK--NGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGL-EPGIVC 700
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y +I G+C+ G I A+ VFD + K PN + Y +I+G CK G++ +A EM+
Sbjct: 701 YNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEML 760
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+RG P+ YN + G +++A L +M G+ NVS +++ G C GK
Sbjct: 761 DRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQ 819
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS-FNAV 372
+ L +M+ + P+ ++ E V++ F K GK EA + E++ + + F+ +
Sbjct: 820 ETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLL 879
Query: 373 FRILVENG 380
F ++ G
Sbjct: 880 FTDMINKG 887
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 4/213 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
V++N + PD+ Y+++I G CK+ +E A + D M ++P ++ YN +I+GFC+ G+
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 713
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ A+ + ++ +G PN +TY A+I G C NG + +A L +M G + +
Sbjct: 714 ISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNV 773
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+ G +QA+ +L M +V + +++GFCK GK E LL M R
Sbjct: 774 LATGCSDAADLEQAL-FLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDRE 832
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ P + V + G+L A + ++ Q
Sbjct: 833 IVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQ 865
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 144/363 (39%), Gaps = 57/363 (15%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNV---KAAIFWFHQAKQIENGACLYSYNSL 164
++IAAS + ++LS +S LI +G R + K + +F+ ++ ++ L
Sbjct: 66 LAIAASDI--PSRLSPDAVSSLI--FGGRSHSLHPKLLLDFFYWSRPRIAPPSADAFARL 121
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD--VMTV 222
L + A HQ++ + PP V + I+ A + D +
Sbjct: 122 AASLCAASLFPQANGLLHQMILAHPHPPLV------------LASIQRAIQDTDHRSRSP 169
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P+ + +++ + K G + A + + M + G P N ++ L R D ++
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLL---RADAMEL 226
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +L GF + A + PDV +Y I C
Sbjct: 227 LW---KLKGFMEG-----------------------------AGILPDVYTYSTFIEAHC 254
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K D A + +EMR R ++N + L +G ++ A ++M P+
Sbjct: 255 KARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAF 314
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+Y ++ GLC R+++ + L+D M SG + +Y L+ G+ +EG I E
Sbjct: 315 TYGALMNGLCKGS-RLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKE 373
Query: 463 MVT 465
M++
Sbjct: 374 MIS 376
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 177/342 (51%), Gaps = 40/342 (11%)
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
L RV ++ A E F + N V D TY+T++ G C G I+ A + D M V+
Sbjct: 9 ALCRVGNVDQAVEVFRGMSDRNCVA-DGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTF 67
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN +A+N +I+ CKKG+L A K ++ M +GC PNE+TYN++++GLC+ G++D+A L
Sbjct: 68 PNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSL 127
Query: 284 MAKMRLN-----------------------------------GFKDNVSTHKSMLKGLCV 308
+ +M N G++ N ++ S++ GL
Sbjct: 128 LNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFK 187
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
GK + + + ++E P+ Y +I+G C+ GK DEA L EM+ +G P F+
Sbjct: 188 EGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFT 247
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++++ E G++ +AIL+ K+M DC + V Y+ +I GLC G++++ + +M
Sbjct: 248 YSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLC-KNGKLKEALIVWKQM 306
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ G LD YS ++ G+C VE M++ ++M+ +L
Sbjct: 307 LSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKL 348
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 169/385 (43%), Gaps = 57/385 (14%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDF----FISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ + L + I A SLL F + LI A +G++ A +K
Sbjct: 38 YSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRA------SK 91
Query: 151 QIEN---GACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
++N C+ +YNSL+ L + A +++V VP D+ T+ T++ G+
Sbjct: 92 LVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDI-TFGTLVDGF 150
Query: 205 CKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
K G + +V + K N +Y+++I+G K+G+ E + EM+ +GC+PN
Sbjct: 151 VKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNT 210
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+ Y+A+I GLC G+ DEAK + +M+ G N T+ S++ G G +A+ +
Sbjct: 211 IVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKE 270
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK------------------ 363
+ + + N Y ++ING CK GK EA+ + K+M +RG+K
Sbjct: 271 MTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 330
Query: 364 -------------------PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
P V ++N + + RAI +L M C P+F++
Sbjct: 331 VEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITC 390
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMI 429
+ + L QD + +D ++
Sbjct: 391 DIFLKTLRDNMDPPQDGREFLDELV 415
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 62 IYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL---KNS 118
++++ H + + PN T Y+A+ D L A L KN
Sbjct: 185 LFKEGKGEHGMQLWKEMVEKGCKPN-----TIVYSALIDGLCREGKPDEAKEYLIEMKNK 239
Query: 119 NKLSDFFI-SKLIKAYGDRGNV-KAAIFWFHQAKQIENGACLYS---YNSLLGVLVRVNS 173
+ F S L+ Y + G++ KA + W K++ + C + Y+ L+ L +
Sbjct: 240 GHTPNSFTYSSLMWGYFEAGDIHKAILVW----KEMTDNDCNHHEVCYSILINGLCKNGK 295
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM-----TVKPNLLA 228
+K A + Q++ + DV Y++MI G+C ++E K+F+ M ++P+++
Sbjct: 296 LKEALIVWKQMLSRGI-KLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVT 354
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
YN ++N FC K + A +N M+++GC P+ +T + + L
Sbjct: 355 YNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 397
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 177/333 (53%), Gaps = 8/333 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++ Y G V AA W + + +E A Y+ ++L+ L A ++++
Sbjct: 134 MMAGYCGAGQVDAARRWCAE-RAVERDA--YTCDTLIRGLCGRGRTANALAVLDEMLRRR 190
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
VP DV TYT ++ CK + A K+ D M K P+++ YN ++NG C++G +++A
Sbjct: 191 CVP-DVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 249
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + + + GC PN ++YN ++ GLC R ++A+ LM +M G NV T ++
Sbjct: 250 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 309
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G + A+ L + + +P+ SY +++ FCK K D+A++ L M +RG P
Sbjct: 310 LCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPD 369
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ S+N + L +GE+D A+ LL Q+ C P +SYNT+I GL A G+ ++ +L+
Sbjct: 370 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA-GKTKEALELL 428
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
+ M+ G D YS + G C E +E+ ++
Sbjct: 429 NEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 461
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 141/275 (51%), Gaps = 1/275 (0%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
PDV Y M+ GYC G ++ A++ V+ + +T+I G C +G A ++E
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDE 185
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ R C P+ +TY ++ C +A L+ +MR G ++ T+ ++ G+C G+
Sbjct: 186 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 245
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A+ +L+N+ P+ SY +V+ G C + ++A L+ EM +G P V +FN
Sbjct: 246 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 305
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L G ++ A+ +L+Q+P+ C PN +SYN ++ C K +M +D M+
Sbjct: 306 LISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQK-KMDKAMAFLDLMVSR 364
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G D Y+ LL C G V+ +++ H++ K
Sbjct: 365 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 399
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 171/346 (49%), Gaps = 5/346 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L++A R K A+ + + + +YN ++ + + + A EF +
Sbjct: 201 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 260
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P VS Y +++G C E+A+++ M K PN++ +N +I+ C+KG +E A
Sbjct: 261 CEPNTVS-YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 319
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + ++ GC PN L+YN +++ C ++D+A + M G ++ ++ ++L
Sbjct: 320 LEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 379
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ D AV L + + P + SY VI+G K GK+ EA+ LL EM ++GL+P
Sbjct: 380 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 439
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +++ + L ++ AI ++ M PN V YN II GLC + DL
Sbjct: 440 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRR-ETHSAIDLF 498
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLL 471
MI +G + + Y+ L++G EG ++ + E+ ++ +L
Sbjct: 499 AYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEEIL 544
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 132/263 (50%), Gaps = 10/263 (3%)
Query: 201 IRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
+R + G ++ A ++ +P+ +I G EA++ + C P+
Sbjct: 74 LRSLVRRGELDEALRLVGSAR-RPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPD 127
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+ YNAM+ G C G+VD A+ A+ + + T ++++GLC G+ A+ L
Sbjct: 128 VMAYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLD 184
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
++ PDV +Y +++ CK +A+ LL EMR +G P + ++N V + + G
Sbjct: 185 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 244
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+D AI LK +P C PN VSYN ++ GLC A+ R +D E+L+ M + G + +
Sbjct: 245 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAE-RWEDAEELMGEMGQKGCPPNVVTF 303
Query: 441 SCLLKGYCEEGNVENVMQIAHEM 463
+ L+ C +G VE +++ ++
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQI 326
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 87/174 (50%), Gaps = 4/174 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A G V A+ HQ K L SYN+++ L + K A E +++V +
Sbjct: 376 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 435
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ PD+ TY+T+ G C+ IE+A + F M ++PN + YN +I G CK+ E A
Sbjct: 436 L-QPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 494
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
M+ GC PNE TY +I GL G + EA+ L+ ++ G + + H
Sbjct: 495 IDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEEILLDVH 548
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 207/413 (50%), Gaps = 29/413 (7%)
Query: 76 NWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK------------------- 116
W S+P + + HT Y + L +H ++S A SL++
Sbjct: 1 TWLSSPANST--FRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVL 58
Query: 117 --NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
N+ SD ++ S LI AY + G ++ AI + + + + +L L+++
Sbjct: 59 ETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKY 118
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYN 230
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++YN
Sbjct: 119 FKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYN 177
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
T++NG+ + G+L+E + + M+ G P+ TY+ +I GLC ++D A L +M +
Sbjct: 178 TLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVK 237
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G +A
Sbjct: 238 GLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 297
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
L+ EM +GLKP F++ + + G+LD A K+M Q + + V+Y +I G
Sbjct: 298 HDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISG 357
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
LC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 358 LCQ-EGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 162/307 (52%), Gaps = 5/307 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YNSLL L + + A F +V E PDV +Y+ +I G+CK+ + A+K++ M
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
PN+ YN +NG +KG + +A+ EM+ GC P+ +TY+ +I+G + +
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D+A L M G + N T+ +L GLC K D+A R ++E +PD +Y +
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+ GFC +GK ++A+ + EM ++G P V ++N + + G+ A L + M C
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS-GHNLDFTMYSCLLKGYCEEGNVENV 456
P+ VS+N +I GL AK R+ D ++ +RM + G + D Y+ L+ G C E +
Sbjct: 689 KPDTVSHNIMIDGLSKAK-RLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 747
Query: 457 MQIAHEM 463
M++ E+
Sbjct: 748 MKVFKEI 754
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 175/359 (48%), Gaps = 12/359 (3%)
Query: 115 LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSI 174
L +S + D I LI++ +A + + Q +G C +S++ L + +
Sbjct: 335 LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTC----HSVIQELCKAGRV 390
Query: 175 KLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK-----PNLLAY 229
A ++K P D++T++ +I CK I+ A++ M K + +Y
Sbjct: 391 DSALSLLETMIKRGYCP-DMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSY 449
Query: 230 NTMINGFCKKGELEEAKKCMNEMMN-RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
N+++N CK ++ +A + M++ R P+ ++Y+ +I G C + A+ L +M
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
NV+T+ + L GL G+ A G ++ A +PDV +Y +I+GF K D
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L + M +RG +P ++N + L + + D A L ++M + C P+ V+Y T++
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLL 629
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G C G+++ ++ D M+ GH+ D Y+CLLKG+ G Q+ MV+++
Sbjct: 630 YGFCNV-GKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQ 687
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 160/351 (45%), Gaps = 43/351 (12%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
A +YSY L ++ ++ A + F ++ E+ P + +T + G CK G IE A +
Sbjct: 269 ATIYSYMVL--AHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFE 326
Query: 216 VFDVM--TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
M ++ + Y+ +I + G +++A++ E+ R +P+ T +++I LC
Sbjct: 327 ACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCK 386
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN------------ 321
GRVD A L+ M G+ +++TH ++ LC K +A +L+
Sbjct: 387 AGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSC 446
Query: 322 --------------------------VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V E + PDV SY ++I+GFCKI + A L K
Sbjct: 447 FSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYK 506
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+M P V ++NA L+ G + A + ++M C P+ ++Y+T+I G +A+
Sbjct: 507 QMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLAR 566
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Q +L + MI G + Y+CLL G C+E + ++ +MV +
Sbjct: 567 KHDQ-AHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 616
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 40/256 (15%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+ L L+R I A+ + ++V PDV TY+T+I G+ + A ++F+
Sbjct: 519 TYNAFLNGLMRKGRIADAQGVYEEMVAAGC-SPDVITYSTLIHGFSLARKHDQAHELFET 577
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +PN + YN +++G CK+ + +EA + +M+ RGC P+ +TY ++YG C G+
Sbjct: 578 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGK 637
Query: 277 VDEAKMLMAKM--------------RLNGF---------------------KDNVSTHKS 301
+++A + +M L GF K + +H
Sbjct: 638 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNI 697
Query: 302 MLKGLCVVGKFDQAVG-YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
M+ GL + D AV + R + +PD+ +Y +I G C + EA+ + KE+
Sbjct: 698 MIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRL 757
Query: 361 GLKPTVFSFNAVFRIL 376
L P +FN + +
Sbjct: 758 KLSPDPHAFNVLLEAI 773
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 166/384 (43%), Gaps = 49/384 (12%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ +IK D G W QA+ ++ +++YN LL L+R +K A + F ++V
Sbjct: 100 VGAVIKHLRDGGEALTFFRWL-QARNFKHD--VFTYNCLLDKLIRHRDLKQAGQVFEKMV 156
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTM---INGFCKK 239
+ VVP TY +++ C + A + F M KP+ Y + + K+
Sbjct: 157 AQGVVPNGF-TYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKE 215
Query: 240 GELE--------------------------------EAKKCMNEMMNRGCRPNELTYNAM 267
GE EA K M+ GC+P+ Y+ M
Sbjct: 216 GEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYM 275
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFK--DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+ C +DEA L +M + +NV+ + L GLC GK +QA R M+
Sbjct: 276 VLAHCKLENLDEAFKLFLEMAVESKAPLNNVAW-TAFLSGLCKSGKIEQAFEACRT-MQE 333
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+++ Y+++I + G+ D+A E+ R ++P+ + ++V + L + G +D A
Sbjct: 334 SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSA 393
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS--GHNLDFTMYSCL 443
+ LL+ M + P+ +++ +I LC A ++Q+ ++ + M R + Y+ L
Sbjct: 394 LSLLETMIKRGYCPDMATHSMLINELCKAD-KIQEAQEFLQGMDRKISSRSSSCFSYNSL 452
Query: 444 LKGYCEEGNVENVMQIAHEMVTKK 467
L C+ V I MV+++
Sbjct: 453 LNSLCKAKKVHQAFAIFSTMVSER 476
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+ + + G ++ A+ F + + + +YN LL R A++ F Q++
Sbjct: 626 TTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLF-QVMV 684
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGEL 242
PD ++ MI G K +++A +VF+ M P+L+ YN++I G C + L
Sbjct: 685 SRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRL 744
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
EA K E+ P+ +N ++ +
Sbjct: 745 SEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 206/407 (50%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H + S A SL++ +
Sbjct: 3 SPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + ++ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ I+ E P + + ++ +CK G I A+ VFD +T ++P++++YNT++NG+
Sbjct: 123 FYEDIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ G+L+E + + M+ G +P+ TY+ +I GLC ++D+A L +M + G N
Sbjct: 182 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP F++ + + G+LD A K+M Q + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEM 407
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 161/291 (55%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F + + SYN+L+ +R+ L E F
Sbjct: 137 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD--LDEGFRLK 194
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK +++A ++FD M VK PN + + T+I+G CK
Sbjct: 195 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 254
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M + G K + T+
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTY 314
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G D A + + +++ N+ D +Y +I+G C+ G+S +A +L+EM +
Sbjct: 315 TTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GLKP + ++ + + G++ + LLK+M + P+ V+YN ++ G
Sbjct: 375 VGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 151/318 (47%), Gaps = 17/318 (5%)
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVK-ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
SL+ V+V A F I++ + D+ ++ +I Y + G + +A + + +
Sbjct: 34 SLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYTLTR 93
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKC---------MNEMMNRGCRPNELTYNAMIYGLC 272
+ ++T C+K LE K +++ G + +N +++ C
Sbjct: 94 EHKLWVPFDT-----CRK-VLEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFC 147
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+G + A+ + + G + +V ++ +++ G +G D+ ++ + + PDV
Sbjct: 148 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 207
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y V+ING CK K D+A L EM +GL P +F + +NG +D A+ + KQM
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
P+ ++YNT+I GLC KG ++ DL+D M G D Y+ L+ G C+EG+
Sbjct: 268 LSQSLSPDLITYNTLIYGLC-KKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 326
Query: 453 VENVMQIAHEMVTKKGRL 470
++ + M+ + RL
Sbjct: 327 LDTAFEHRKRMIQENIRL 344
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 202/382 (52%), Gaps = 25/382 (6%)
Query: 92 TPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFH 147
T Y+ + + L + S + +A L +K ++D + + ++ ++ G ++ A WF+
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ +++ + +Y +L+ ++ + A E F ++ E +P ++ TY+ +I G+CK
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP-NIVTYSALIDGHCKA 601
Query: 208 GMIENAKKVFDVM-------------------TVKPNLLAYNTMINGFCKKGELEEAKKC 248
G +E A ++F+ M + +PN++ Y +++GFCK +EEA+K
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ M GC PN++ Y+A+I GLC G++DEA+ + +M +GF + T+ S++
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
V + D A L ++E + P+V Y +I+G CK+GK+DEA L++ M +G +P V +
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ A+ G+++ + LL++M PN+V+Y +I C G + +L++ M
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI-DHCCKNGALDVAHNLLEEM 840
Query: 429 IRSGHNLDFTMYSCLLKGYCEE 450
++ Y +++G+ +E
Sbjct: 841 KQTHWPTHTAGYRKVIEGFNKE 862
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 121/544 (22%), Positives = 217/544 (39%), Gaps = 87/544 (15%)
Query: 42 SSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDV 101
S + L QF L ++V +V+ P + FF WA Y HT P Y A+ D+
Sbjct: 119 SQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQI----GYKHTAPVYNALVDL 174
Query: 102 LLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC 157
++ + L+ + ++ F++ L++ + G+ A+ + K
Sbjct: 175 IVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPS 234
Query: 158 LYSYNSLLGVLVRVNSIKLA--------------------------------EEFFHQIV 185
+YN L+ ++ + + A E +
Sbjct: 235 RSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE 294
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
EN VP D YT +I G C+ + E A + M PN++ Y+T++ G K +L
Sbjct: 295 TENFVP-DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM--------------- 287
K+ +N MM GC P+ +N++++ C +G A L+ KM
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Query: 288 --RLNGFKDNVSTH------------------------KSMLKGLCVVGKFDQAVGYLRN 321
+ G KD+++ S + LC GK+++A +R
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
++ PD +Y V+N C K + A L +EM+ GL V+++ + + G
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+++A +M ++ C PN V+Y +I AK ++ +L + M+ G + YS
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK-KVSYANELFETMLSEGCLPNIVTYS 592
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVF 501
L+ G+C+ G VE QI M K + + + + D +VT G+ + F
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKD-VPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 502 VHQV 505
H+V
Sbjct: 652 SHRV 655
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 169/381 (44%), Gaps = 32/381 (8%)
Query: 111 AASLLKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV 169
A +L++ N + D F +KLI + + A+ + ++ + + +Y++LL +
Sbjct: 289 ALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 348
Query: 170 RVNSIKLAEEFFHQIVKENVVP-PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----P 224
+ + + ++ E P P + + +++ YC G A K+ M VK P
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKI--FNSLVHAYCTSGDHSYAYKLLKKM-VKCGHMP 405
Query: 225 NLLAYNTMINGFCKKGE------LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ YN +I C + L+ A+K +EM+ G N++ ++ LC G+ +
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A ++ +M GF + ST+ +L LC K + A + + DV +Y +++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
+ FCK G ++A EMR G P V ++ A+ ++ ++ A L + M CL
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM----------------YSC 442
PN V+Y+ +I G C A G+++ + +RM S D M Y
Sbjct: 586 PNIVTYSALIDGHCKA-GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 443 LLKGYCEEGNVENVMQIAHEM 463
LL G+C+ VE ++ M
Sbjct: 645 LLDGFCKSHRVEEARKLLDAM 665
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 106/273 (38%), Gaps = 76/273 (27%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
A LY+Y+SL+ +V LA + +++ EN P+V YT MI G CK+G + A K
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKML-ENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 216 VFDVMTVK---PNLLAYNTMINGF-----------------------------------C 237
+ +M K PN++ Y MI+GF C
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMI----------------------------Y 269
K G L+ A + EM + Y +I Y
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVY 885
Query: 270 GLCINGRVDEAKMLMAKMRL--------NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
L I+ + ++ MA +RL D ST+ S+++ LC+ K + A
Sbjct: 886 RLLIDNLIKAQRLEMA-LRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSE 944
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+ + + P+++S+ +I G + K EA+ LL
Sbjct: 945 MTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 208/414 (50%), Gaps = 29/414 (7%)
Query: 75 FNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK------------------ 116
F W S+P + + HT Y + L +H ++S A SL++
Sbjct: 1 FTWLSSPANST--FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAI 58
Query: 117 ---NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 59 LETKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLK 118
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAY 229
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++Y
Sbjct: 119 YFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 177
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
NT++NG+ + G L+E + + M+ G P+ TY+ +I GLC ++D+A L +M +
Sbjct: 178 NTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLV 237
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G +
Sbjct: 238 KGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQ 297
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A L+ EM +GLKP F++ + + G+LD A K+M Q + + V+Y +I
Sbjct: 298 AHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALIS 357
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 358 GLCQ-EGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 410
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 203/412 (49%), Gaps = 27/412 (6%)
Query: 68 PYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----KNSN---K 120
P L FF+W N + H + + + L ++ A + L K SN K
Sbjct: 84 PADGLRFFDWVYNKG-----FSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVK 138
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
L D + + LI++YG+ G + ++ F K++ + ++NSLL +L++ +A +
Sbjct: 139 LQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDM 198
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFC 237
F ++ + V PD T+ T+I G+CK M++ A +F M + P+++ YNT+I+G C
Sbjct: 199 FDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLC 258
Query: 238 KKGELEEAKKCMNEMMNRGC--RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
+ G+++ A +N M+ + PN ++Y ++ G C+ +DEA ++ +M G K N
Sbjct: 259 RAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPN 318
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYL-RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
T+ +++KGL ++D+ G+L +PD ++ ++I C G D A+ +
Sbjct: 319 AVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVF 378
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM-------DCLPNFVSYNTI 407
+EM L P S++ + R L E D+A L ++ + +C P +YN +
Sbjct: 379 QEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLM 438
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
LC A G+ + E + ++++ G D + Y L+ G C EG + ++
Sbjct: 439 FEYLC-ANGKAKQAEKVFRQLMKRGAQ-DPSSYRTLITGLCREGKFKAAYEL 488
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 21/302 (6%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFIS--KLIKAYGDRGNVKAAIFWFHQ 148
Y I D L + IA +LL K + + +S L++ Y + + A+ FH+
Sbjct: 250 YNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHE 309
Query: 149 --AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ ++ A +YN+L+ L + + F PD T+ +I+ +C
Sbjct: 310 MLTRGLKPNAV--TYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCD 367
Query: 207 MGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG------- 256
G ++ A KVF M + P+ +Y+ +I C + E ++A+ NE+ +
Sbjct: 368 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNE 427
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C+P YN M LC NG+ +A+ + ++ G +D S++++++ GLC GKF A
Sbjct: 428 CKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDP-SSYRTLITGLCREGKFKAAY 486
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
L ++ PD ++YEV+I+G KIG++ A L+ M P +F++V L
Sbjct: 487 ELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAEL 546
Query: 377 VE 378
V+
Sbjct: 547 VK 548
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 149/347 (42%), Gaps = 12/347 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIKA+ D G++ AA+ F + ++ SY+ L+ L N AE F+++ ++
Sbjct: 361 LIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKE 420
Query: 189 VV------PPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFCKKG 240
V+ P + Y M C G + A+KVF + + + +Y T+I G C++G
Sbjct: 421 VLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDPSSYRTLITGLCREG 480
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ + A + + M+ R P+ TY +I GL G A + +M + + +T
Sbjct: 481 KFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFH 540
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S+L L + + G L ++E + ++ + + ++A +++ +
Sbjct: 541 SVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFSSAQKEKAFLIVRLLYDN 600
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G + + L EN +L A L+ + + + + NTII GLC K R +
Sbjct: 601 GY---LIKMEELLDFLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLCKHK-RHSE 656
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
L + ++ G++ + + L G E + ++ M T +
Sbjct: 657 AFSLYNELVELGNHQQLSCHVVLTNALEAAGKWEELQFVSKRMATMR 703
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 202/382 (52%), Gaps = 25/382 (6%)
Query: 92 TPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFH 147
T Y+ + + L + S + +A L +K ++D + + ++ ++ G ++ A WF+
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ +++ + +Y +L+ ++ + A E F ++ E +P ++ TY+ +I G+CK
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP-NIVTYSALIDGHCKA 601
Query: 208 GMIENAKKVFDVM-------------------TVKPNLLAYNTMINGFCKKGELEEAKKC 248
G +E A ++F+ M + +PN++ Y +++GFCK +EEA+K
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ M GC PN++ Y+A+I GLC G++DEA+ + +M +GF + T+ S++
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
V + D A L ++E + P+V Y +I+G CK+GK+DEA L++ M +G +P V +
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ A+ G+++ + LL++M PN+V+Y +I C G + +L++ M
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI-DHCCKNGALDVAHNLLEEM 840
Query: 429 IRSGHNLDFTMYSCLLKGYCEE 450
++ Y +++G+ +E
Sbjct: 841 KQTHWPTHTAGYRKVIEGFNKE 862
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 121/544 (22%), Positives = 217/544 (39%), Gaps = 87/544 (15%)
Query: 42 SSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDV 101
S + L QF L ++V +V+ P + FF WA Y HT P Y A+ D+
Sbjct: 119 SQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQI----GYKHTAPVYNALVDL 174
Query: 102 LLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC 157
++ + L+ + ++ F++ L++ + G+ A+ + K
Sbjct: 175 IVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPS 234
Query: 158 LYSYNSLLGVLVRVNSIKLA--------------------------------EEFFHQIV 185
+YN L+ ++ + + A E +
Sbjct: 235 RSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE 294
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
EN VP D YT +I G C+ + E A + M PN++ Y+T++ G K +L
Sbjct: 295 TENFVP-DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM--------------- 287
K+ +N MM GC P+ +N++++ C +G A L+ KM
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Query: 288 --RLNGFKDNVSTH------------------------KSMLKGLCVVGKFDQAVGYLRN 321
+ G KD+++ S + LC GK+++A +R
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
++ PD +Y V+N C K + A L +EM+ GL V+++ + + G
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+++A +M ++ C PN V+Y +I AK ++ +L + M+ G + YS
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK-KVSYANELFETMLSEGCLPNIVTYS 592
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVF 501
L+ G+C+ G VE QI M K + + + + D +VT G+ + F
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKD-VPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 502 VHQV 505
H+V
Sbjct: 652 SHRV 655
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 169/381 (44%), Gaps = 32/381 (8%)
Query: 111 AASLLKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV 169
A +L++ N + D F +KLI + + A+ + ++ + + +Y++LL +
Sbjct: 289 ALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 348
Query: 170 RVNSIKLAEEFFHQIVKENVVP-PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----P 224
+ + + ++ E P P + + +++ YC G A K+ M VK P
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKI--FNSLVHAYCTSGDHSYAYKLLKKM-VKCGHMP 405
Query: 225 NLLAYNTMINGFCKKGE------LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ YN +I C + L+ A+K +EM+ G N++ ++ LC G+ +
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A ++ +M GF + ST+ +L LC K + A + + DV +Y +++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
+ FCK G ++A EMR G P V ++ A+ ++ ++ A L + M CL
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM----------------YSC 442
PN V+Y+ +I G C A G+++ + +RM S D M Y
Sbjct: 586 PNIVTYSALIDGHCKA-GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 443 LLKGYCEEGNVENVMQIAHEM 463
LL G+C+ VE ++ M
Sbjct: 645 LLDGFCKSHRVEEARKLLDAM 665
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 131/282 (46%), Gaps = 43/282 (15%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
A LY+Y+SL+ +V LA + +++ EN P+V YT MI G CK+G + A K
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKML-ENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 216 VFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ +M K PN++ Y MI+GF G++E + + M ++G PN +TY +I C
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
NG +D A L+ +M+ + + + ++ +++G +F +++G L + + + P +
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLS 883
Query: 333 SYEVVIN-------------------------------------GFCKIGKSDEAISLLK 355
Y ++I+ C K + A L
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 943
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
EM +G+ P + SF ++ + L N ++ A+LLL + M C
Sbjct: 944 EMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVC 985
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 186/356 (52%), Gaps = 12/356 (3%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLA 177
L+ F + LI+ + GN++ + +F +++E CL +YN+++G ++ I A
Sbjct: 201 LNVFSYNILIRGFCAAGNLEMGLRFF---EEMERNRCLPNVVTYNTVIGAYCKLKRIDEA 257
Query: 178 EEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMIN 234
+ + E + P++ TY +I G C++G IE V M K P+ + YNT++N
Sbjct: 258 FKLLRSMGLEGL-EPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVN 316
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
G+CK G +A +EM+ G P+ +TY ++I +C G ++ A +M + G +
Sbjct: 317 GYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRP 376
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N T+ S++ G G D+A ++ + P + +Y ++NG C G+ +EAI LL
Sbjct: 377 NGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLL 436
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
+ M +GL P V S++ + ELDRA + +M + P+ ++Y+++I GLC
Sbjct: 437 RGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQ 496
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ R+ + DL M+ D Y+ L+ GYC+EG++ + + EM+ KKG L
Sbjct: 497 R-RLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMI-KKGFL 550
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 166/311 (53%), Gaps = 6/311 (1%)
Query: 160 SYNSLLGVLVRVNS-IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
SYN++L +VR + AE+ + +++ V +V +Y +IRG+C G +E + F+
Sbjct: 169 SYNAILDSIVRCRKPVIFAEKVYREMIASGV-SLNVFSYNILIRGFCAAGNLEMGLRFFE 227
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M PN++ YNT+I +CK ++EA K + M G PN LTYN +I GLC G
Sbjct: 228 EMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVG 287
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R++E ++A+M GF + T+ +++ G C VG F QA+ ++ + PDV +Y
Sbjct: 288 RIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYT 347
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+IN CK G + A+ +M RGL+P ++ ++ + G +D A + +M +
Sbjct: 348 SLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRS 407
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P V+YN ++ G C++ GRM++ L+ M G + D YS ++ G+C ++
Sbjct: 408 GFPPTIVTYNALLNGHCVS-GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDR 466
Query: 456 VMQIAHEMVTK 466
Q+ EMV K
Sbjct: 467 AFQMNAEMVEK 477
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 157/292 (53%), Gaps = 5/292 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN ++ L RV I+ ++ ++ P V TY T++ GYCK+G A +
Sbjct: 273 LLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGV-TYNTLVNGYCKVGNFHQALVLH 331
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + P+++ Y ++IN CK G L A + ++M RG RPN +TY ++I G
Sbjct: 332 SEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQK 391
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +DEA + +M +GF + T+ ++L G CV G+ ++A+G LR + ++PDV SY
Sbjct: 392 GFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSY 451
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I GFC+ + D A + EM +G+ P +++++ + L E L+ A L ++M
Sbjct: 452 STIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLN 511
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
LP+ +Y ++I G C +G + + +L D MI+ G D Y+ L+ G
Sbjct: 512 KSLLPDEFTYTSLINGYC-KEGDLNEALNLHDEMIKKGFLPDTVTYNVLING 562
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 174/325 (53%), Gaps = 20/325 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ +V + A H + N +PPDV TYT++I CK G + A + FD
Sbjct: 310 TYNTLVNGYCKVGNFHQAL-VLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQ 368
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V+ PN + Y ++INGF +KG ++EA + +EM+ G P +TYNA++ G C++GR
Sbjct: 369 MHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGR 428
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EA L+ M G +V ++ +++ G C + D+A ++E ++PD +Y
Sbjct: 429 MEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSS 488
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G C+ + +EA L +EM + L P F++ ++ + G+L+ A+ L +M +
Sbjct: 489 LIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKG 548
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLV---------------DRMIRSGHNLDFTMYS 441
LP+ V+YN +I GL + R ++ + L+ D +I S +++F
Sbjct: 549 FLPDTVTYNVLINGL-NKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVV 607
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTK 466
L+KG+C +G + Q+ M+ +
Sbjct: 608 ALIKGFCMKGLMNEADQVFESMIKR 632
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 182/356 (51%), Gaps = 24/356 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L+ Y GN A+ ++ + NG + +Y SL+ + + ++ A EFF Q+
Sbjct: 314 LVNGYCKVGNFHQALVL--HSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHV 371
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ P V TYT++I G+ + G ++ A +++D M P ++ YN ++NG C G +E
Sbjct: 372 RGLRPNGV-TYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRME 430
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + M +G P+ ++Y+ +I G C +D A + A+M G + T+ S++
Sbjct: 431 EAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLI 490
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+GLC + ++A + ++ ++ PD +Y +ING+CK G +EA++L EM +G
Sbjct: 491 QGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFL 550
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII--C------------ 409
P ++N + L + A LL ++ + +PN ++Y+T+I C
Sbjct: 551 PDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALI 610
Query: 410 -GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G CM KG M + + + + MI+ + +Y+ ++ G+C +GNV ++ EMV
Sbjct: 611 KGFCM-KGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMV 665
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 145/288 (50%), Gaps = 7/288 (2%)
Query: 184 IVKENVVPPDVSTYTTMIRGY--CKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCK 238
+ K N P V +Y ++ C+ +I A+KV+ M V N+ +YN +I GFC
Sbjct: 157 LAKLNGFMPGVLSYNAILDSIVRCRKPVI-FAEKVYREMIASGVSLNVFSYNILIRGFCA 215
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G LE + EM C PN +TYN +I C R+DEA L+ M L G + N+ T
Sbjct: 216 AGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLT 275
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ ++ GLC VG+ ++ G L + PD +Y ++NG+CK+G +A+ L EM
Sbjct: 276 YNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEML 335
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
GL P V ++ ++ + + G L+RA+ QM PN V+Y ++I G KG M
Sbjct: 336 RNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQ-KGFM 394
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + D MIRSG Y+ LL G+C G +E + + M K
Sbjct: 395 DEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGK 442
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 142/291 (48%), Gaps = 20/291 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SY++++ R + A + ++V E V PD TY+++I+G C+ + A +F
Sbjct: 450 SYSTIIAGFCRYQELDRAFQMNAEMV-EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQE 508
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+ Y ++ING+CK+G+L EA +EM+ +G P+ +TYN +I GL R
Sbjct: 509 MLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQAR 568
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSML---------------KGLCVVGKFDQAVGYLRN 321
EAK L+ K+ + N T+ +++ KG C+ G ++A +
Sbjct: 569 TREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFES 628
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+++ N P+ Y V+I+G C+ G +A L KEM G P + A+ + L G
Sbjct: 629 MIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGM 688
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
++ L+++ + + C + + + + +G + V +L+ M + G
Sbjct: 689 DEQLNLVIRDILR-SCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDG 738
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK---FDQAVGYLRNVMEANMNPDVKS 333
+++A ++ +LNGF V ++ ++L + K F + V R ++ + ++ +V S
Sbjct: 148 IEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKV--YREMIASGVSLNVFS 205
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y ++I GFC G + + +EM P V ++N V + +D A LL+ M
Sbjct: 206 YNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMG 265
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
PN ++YN +I GLC GR+++ ++ M R G D Y+ L+ GYC+ GN
Sbjct: 266 LEGLEPNLLTYNMVINGLCRV-GRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNF 324
Query: 454 ENVMQIAHEMV 464
+ + EM+
Sbjct: 325 HQALVLHSEML 335
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 56/272 (20%)
Query: 149 AKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
A+ +E G +Y+SL+ L + A + F +++ ++++P D TYT++I GYCK
Sbjct: 472 AEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLP-DEFTYTSLINGYCK 530
Query: 207 MGMIENAKKVFDVMTVK---PNLLAYNTMING---------------------------- 235
G + A + D M K P+ + YN +ING
Sbjct: 531 EGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGIT 590
Query: 236 ----------------------FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
FC KG + EA + M+ R +PNE YN +I+G C
Sbjct: 591 YDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCR 650
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+G V +A L +M GF + T +++K L G +Q +R+++ + D +
Sbjct: 651 DGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAEL 710
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+ ++ K G D +LL EM G P+
Sbjct: 711 SKALVQINHKEGNIDAVFNLLTEMAKDGFLPS 742
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 239/490 (48%), Gaps = 57/490 (11%)
Query: 3 TPRRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVI 62
T S +N + + Q L ++S L+ +NP+P I QF LGS +V
Sbjct: 34 TSYSSFSNSTTLYSQ--LHNLVSSFNHLLHQKNPTPSII------QFGKILGS-LVKANH 84
Query: 63 YEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLS 122
Y H FN ++ N C++ + LS S+ S ++LK +
Sbjct: 85 YSIVVSLHRQMEFNGIAS---NLVTLSILINCFSQLGHNSLSFSVFS---NILKKGYEPD 138
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFH--------QAKQIE-----NGAC------------ 157
++ LIK +G++ A+ FH Q Q+ NG C
Sbjct: 139 AITLTTLIKGLCLKGDIHKAL-HFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEML 197
Query: 158 -----------LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ YN+++ + + + A +F+ ++V + + P V TY T+I G C
Sbjct: 198 RRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPT-VVTYNTLICGLCI 256
Query: 207 MGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
MG +++A + M + P + ++ +++ FCK+G+++EAK MM + +PN +T
Sbjct: 257 MGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVT 316
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YN+++ G C+ V++A+ + M G +V ++ M+ G C + D+A+ +
Sbjct: 317 YNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMH 376
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ PDV +Y +I+G CK G+ A+ L+ EM RG P + ++N++ L +N +D
Sbjct: 377 CKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVD 436
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+AI LL ++ + P+ +YN +I GLC + GR++D + + + ++ +G+N+D Y+ +
Sbjct: 437 KAIELLTKLKDHNIQPSVCTYNILINGLCKS-GRLKDAQKVFEDVLVNGYNIDVYTYNTM 495
Query: 444 LKGYCEEGNV 453
+KG+C++G V
Sbjct: 496 IKGFCKKGFV 505
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 115/243 (47%), Gaps = 1/243 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ + ++ K +M G N +T + +I G + +
Sbjct: 67 PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ + G++ + T +++KGLC+ G +A+ + V+ + SY +ING CK
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+G++ A+ +L+ + + ++ V +N + + ++ ++ A +M P V+
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YNT+ICGLC+ G+++D L+ +MI N +S L+ +C+EG V+ + M
Sbjct: 247 YNTLICGLCIM-GQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVM 305
Query: 464 VTK 466
+ K
Sbjct: 306 MKK 308
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Query: 319 LRNVMEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L ME N + ++ + ++IN F ++G + + S+ + +G +P + + + L
Sbjct: 91 LHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLC 150
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
G++ +A+ ++ + N VSY T+I GLC G+ + +++ R+ LD
Sbjct: 151 LKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKV-GQTKAALEMLRRIDGKLVRLDV 209
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
MY+ ++ G C++ V + EMV K+
Sbjct: 210 VMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 222/440 (50%), Gaps = 21/440 (4%)
Query: 41 ISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITD 100
++S+ L ++ + +++V ++I + + L F+ A+ N ++ H T + A+
Sbjct: 1 MASKTLFKWPKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNT--FGAMIH 58
Query: 101 VLLSHSLISIAASLLKNSNK-----LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG 155
L+S + A +L+ + D F++ + + YG AI FH+ + +
Sbjct: 59 RLVSVNQFRPAEGMLERMKQEDCEVTEDVFLT-ICRGYGRVHRPLDAIRVFHKMEDFQVK 117
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK-MGMIENAK 214
SY ++ +LV N +K A F+ ++ +E +PP V + +I+ CK +E+A
Sbjct: 118 PTQKSYLTVFDILVEENHVKRAIGFYKEM-REKGIPPTVVSLNILIKALCKNEETVESAF 176
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++F M +P+ Y T+ING CK G++ +AK+ ++EM +G P+ ++Y ++I+GL
Sbjct: 177 RLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGL 236
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C + +DEA L+ +M +NG + NV T+ S++ GLC G QA+ L ++ + P++
Sbjct: 237 CQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNM 296
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +ING CK GK EA+ +L MR +GLKP + + L A + +
Sbjct: 297 VTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDE 356
Query: 392 MPQMDCLPNFVSY-------NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
M PN S+ N ++ GLC + + L M G +++ + CL+
Sbjct: 357 MALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQ-LYLSMRTRGISVEIGTFDCLV 415
Query: 445 KGYCEEGNVENVMQIAHEMV 464
K +C+ G++ +I EM+
Sbjct: 416 KCFCKRGDLNKAARILEEMI 435
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 184/376 (48%), Gaps = 27/376 (7%)
Query: 68 PYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKL----SD 123
P A+ F+ + P T Y + D+L+ + + A K + +
Sbjct: 101 PLDAIRVFHKMEDFQVKP-----TQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTV 155
Query: 124 FFISKLIKAY-GDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEE 179
++ LIKA + V++A F +++ N C Y+Y +L+ L ++ I A+E
Sbjct: 156 VSLNILIKALCKNEETVESAFRLF---REMPNRGCQPDSYTYGTLINGLCKLGKISQAKE 212
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGF 236
++ +E + P V +YT++I G C+ ++ A ++ + M + +PN+ Y+++++G
Sbjct: 213 LLDEM-EEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGL 271
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
CK G +A + + M+ R PN +TY+ +I GLC G+ EA ++ +MRL G K +
Sbjct: 272 CKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDA 331
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD-------VKSYEVVINGFCKIGKSDE 349
+ ++ GLC + +A ++ + ++P+ VK + +V+ G C
Sbjct: 332 GMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTR 391
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A L MR RG+ + +F+ + + + G+L++A +L++M C+P+ +N ++C
Sbjct: 392 AFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMC 451
Query: 410 GLCMAKGRMQDVEDLV 425
GL K + E LV
Sbjct: 452 GLWDRKKVRETTELLV 467
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 202/382 (52%), Gaps = 25/382 (6%)
Query: 92 TPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFH 147
T Y+ + + L + S + +A L +K ++D + + ++ ++ G ++ A WF+
Sbjct: 442 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 501
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ +++ + +Y +L+ ++ + A E F ++ E +P ++ TY+ +I G+CK
Sbjct: 502 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP-NIVTYSALIDGHCKA 560
Query: 208 GMIENAKKVFDVM-------------------TVKPNLLAYNTMINGFCKKGELEEAKKC 248
G +E A ++F+ M + +PN++ Y +++GFCK +EEA+K
Sbjct: 561 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 620
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ M GC PN++ Y+A+I GLC G++DEA+ + +M +GF + T+ S++
Sbjct: 621 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 680
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
V + D A L ++E + P+V Y +I+G CK+GK+DEA L++ M +G +P V +
Sbjct: 681 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 740
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ A+ G+++ + LL++M PN+V+Y +I C G + +L++ M
Sbjct: 741 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI-DHCCKNGALDVAHNLLEEM 799
Query: 429 IRSGHNLDFTMYSCLLKGYCEE 450
++ Y +++G+ +E
Sbjct: 800 KQTHWPTHTAGYRKVIEGFNKE 821
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/544 (22%), Positives = 218/544 (40%), Gaps = 87/544 (15%)
Query: 42 SSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDV 101
S + L QF L ++V +V+ P + FF WA Y HT P Y A+ D+
Sbjct: 78 SQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQI----GYKHTAPVYNALVDL 133
Query: 102 LLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC 157
++ + L+ + ++ F++ L++ + G+ A+ + K
Sbjct: 134 IVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPS 193
Query: 158 LYSYNSLLGVLVRVNSIKLA--------------------------------EEFFHQIV 185
+YN L+ ++ + + A E +
Sbjct: 194 RSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE 253
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
EN VP D YT +I G C+ + E A + M PN++ Y+T++ G K +L
Sbjct: 254 TENFVP-DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 312
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM--------------- 287
K+ +N MM GC P+ +N++++ C +G A L+ KM
Sbjct: 313 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 372
Query: 288 --RLNGFKDNVS---------THKSMLKG---------------LCVVGKFDQAVGYLRN 321
+ G KD+++ + ML LC GK+++A +R
Sbjct: 373 IGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 432
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
++ PD +Y V+N C K + A L +EM+ GL V+++ + + G
Sbjct: 433 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 492
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+++A +M ++ C PN V+Y +I AK ++ +L + M+ G + YS
Sbjct: 493 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK-KVSYANELFETMLSEGCLPNIVTYS 551
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVF 501
L+ G+C+ G VE QI M K + + + + D +VT G+ + F
Sbjct: 552 ALIDGHCKAGQVEKACQIFERMCGSKD-VPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 610
Query: 502 VHQV 505
H+V
Sbjct: 611 SHRV 614
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 169/381 (44%), Gaps = 32/381 (8%)
Query: 111 AASLLKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV 169
A +L++ N + D F +KLI + + A+ + ++ + + +Y++LL +
Sbjct: 248 ALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 307
Query: 170 RVNSIKLAEEFFHQIVKENVVP-PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----P 224
+ + + ++ E P P + + +++ YC G A K+ M VK P
Sbjct: 308 NKKQLGRCKRVLNMMMMEGCYPSPKI--FNSLVHAYCTSGDHSYAYKLLKKM-VKCGHMP 364
Query: 225 NLLAYNTMINGFCKKGE------LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ YN +I C + L+ A+K +EM+ G N++ ++ LC G+ +
Sbjct: 365 GYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 424
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A ++ +M GF + ST+ +L LC K + A + + DV +Y +++
Sbjct: 425 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 484
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
+ FCK G ++A EMR G P V ++ A+ ++ ++ A L + M CL
Sbjct: 485 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 544
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM----------------YSC 442
PN V+Y+ +I G C A G+++ + +RM S D M Y
Sbjct: 545 PNIVTYSALIDGHCKA-GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 603
Query: 443 LLKGYCEEGNVENVMQIAHEM 463
LL G+C+ VE ++ M
Sbjct: 604 LLDGFCKSHRVEEARKLLDAM 624
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 131/282 (46%), Gaps = 43/282 (15%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
A LY+Y+SL+ +V LA + +++ EN P+V YT MI G CK+G + A K
Sbjct: 666 ATLYTYSSLIDRYFKVKRQDLASKVLSKML-ENSCAPNVVIYTEMIDGLCKVGKTDEAYK 724
Query: 216 VFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ +M K PN++ Y MI+GF G++E + + M ++G PN +TY +I C
Sbjct: 725 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 784
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
NG +D A L+ +M+ + + + ++ +++G +F +++G L + + + P +
Sbjct: 785 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLS 842
Query: 333 SYEVVIN-------------------------------------GFCKIGKSDEAISLLK 355
Y ++I+ C K + A L
Sbjct: 843 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 902
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
EM +G+ P + SF ++ + L N ++ A+LLL + M C
Sbjct: 903 EMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVC 944
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 148/328 (45%), Gaps = 27/328 (8%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC------KMGMIENAK 214
+NSL+ A + ++VK +P V Y +I C +++ A+
Sbjct: 334 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV-VYNILIGSICGDKDSLNFDLLDLAE 392
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
K + M V N + ++ C G+ E+A + EM+ +G P+ TY+ ++ L
Sbjct: 393 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 452
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +++ A +L +M+ G +V T+ M+ C G +QA + + E P+V
Sbjct: 453 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 512
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I+ + K K A L + M + G P + +++A+ + G++++A + ++
Sbjct: 513 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 572
Query: 392 M------PQMDCL----------PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
M P +D PN V+Y ++ G C + R+++ L+D M G
Sbjct: 573 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH-RVEEARKLLDAMSMEGCEP 631
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ +Y L+ G C+ G ++ ++ EM
Sbjct: 632 NQIVYDALIDGLCKVGKLDEAQEVKTEM 659
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 176/348 (50%), Gaps = 40/348 (11%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
+ LY++N ++ VL + +K A+EF + V P+V TY T+I G+C G + A+
Sbjct: 214 SSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGV-KPNVVTYNTIIHGHCLRGKFQRARV 272
Query: 216 VFDVMTVK--------------------------------------PNLLAYNTMINGFC 237
+F M K PN + YN +I+G+C
Sbjct: 273 IFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYC 332
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
KG+L++A +EM+++G + +TYN I+ L + GR+ +A ++ +MR G +
Sbjct: 333 NKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAV 392
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
TH ++ G C G +A G L ++ + P + +Y +I K + EA +L ++
Sbjct: 393 THNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKI 452
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ GL P + FNA+ NG +DRA LLK+M M LP+ ++YNT++ G C +G+
Sbjct: 453 QQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYC-REGK 511
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+++ L+D M R G D Y+ L+ GY + G++++ ++ EM+T
Sbjct: 512 VEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMT 559
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 175/338 (51%), Gaps = 5/338 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L++AY + A+ F+ K+ + + N +L + +++N ++A + ++ + N
Sbjct: 152 LVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMN 211
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ + T+ MI CK G ++ AK+ + + VKPN++ YNT+I+G C +G+ + A
Sbjct: 212 I-RSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRA 270
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M ++G P+ TYN+ I GLC GR++EA L+ KM G N T+ +++ G
Sbjct: 271 RVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDG 330
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G D+A Y ++ + + +Y + I+ G+ +A +++KEMR +G+ P
Sbjct: 331 YCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPD 390
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ N + G+ RA LL +M P V+Y ++I L + RM++ + L
Sbjct: 391 AVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLG-KRNRMKEADALF 449
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ + G D +++ L+ G+C GN++ Q+ EM
Sbjct: 450 SKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM 487
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 162/356 (45%), Gaps = 40/356 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I + RG + A F K Y+YNS + L + ++ A ++++
Sbjct: 257 IIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGG 316
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK------------------------- 223
+VP V TY +I GYC G ++ A D M K
Sbjct: 317 LVPNAV-TYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDA 375
Query: 224 -------------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
P+ + +N +ING+C+ G+ + A ++EM+ +G +P +TY ++IY
Sbjct: 376 DNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYV 435
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
L R+ EA L +K++ G ++ +++ G C G D+A L+ + + PD
Sbjct: 436 LGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPD 495
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+Y ++ G+C+ GK +EA LL EM+ RG+KP S+N + + G++ A +
Sbjct: 496 EITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRD 555
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+M P ++YN +I GLC + + E+L+ M+ G D + Y +++
Sbjct: 556 EMMTTGFDPTILTYNALIQGLCKNQ-EGEHAEELLKEMVSKGITPDDSTYLSIIEA 610
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 4/286 (1%)
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+ ++ V + ++R YC++ A + F ++ K PN+ N M++ F K
Sbjct: 136 LARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLN 195
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ A EM R + T+N MI LC G++ +AK + M G K NV T+
Sbjct: 196 RTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYN 255
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G C+ GKF +A + + + + PD +Y I+G CK G+ +EA L+ +M
Sbjct: 256 TIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG 315
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GL P ++NA+ G+LD+A +M + + V+YN I L M +GRM D
Sbjct: 316 GLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFM-EGRMGD 374
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++++ M G D ++ L+ GYC G+ + + EMV K
Sbjct: 375 ADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGK 420
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 184/380 (48%), Gaps = 44/380 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN LL L R + A F +++ ++ PD T+ ++RG C+ +E A+K+
Sbjct: 7 VFTYNKLLLQLTREHRHDKASAVFQEMIDKSC-QPDAFTFAILLRGLCRSNQLEKARKLL 65
Query: 218 DVMT----------------------------------VK----PNLLAYNTMINGFCKK 239
M VK P ++ Y +++G CK
Sbjct: 66 GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+A K ++EM ++GC PN TYN ++ GLC ++DEAK ++ +M + G+ +V T+
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S +KGLC + D+A +L + + PDV SY VING CK G D A +L M
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN 242
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RG P V +++++ + GE++RA+ LL M ++ C PN V+YN+++ G G +
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLL-GALHRLGHIG 301
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTR 479
ED++ M R G D Y+ + G C+ V+ + MV ++G ++
Sbjct: 302 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV-ERGCTPNASSYSML 360
Query: 480 VVDALLLMWIVTGGSWISRF 499
+VD LL ++ G RF
Sbjct: 361 IVDILLYTVLLDGLCKGGRF 380
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 174/319 (54%), Gaps = 20/319 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS + L + + + A +F ++ V PDV +YTT+I G CK G +++A ++ D
Sbjct: 184 TYNSFIKGLCKCDRVDEARKFLARMP----VTPDVVSYTTVINGLCKSGDLDSASRMLDH 239
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ + P+++ Y+++I+GFCK GE+E A ++ M+ GCRPN + YN+++ L G
Sbjct: 240 MSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGH 299
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE- 335
+ +A+ ++ +M GF +V ++ + + GLC + +A ++E P+ SY
Sbjct: 300 IGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSM 359
Query: 336 ---------VVINGFCKIGKSDEAISLL-KEMRARGLKPTVFSFNAVFRILVENGELDRA 385
V+++G CK G+ DEA +L K + + +P VF +N + + ++D+A
Sbjct: 360 LIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 419
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ + KQM + +C N V++N ++ GLC+ R+ D E ++ M+ G DF Y L+
Sbjct: 420 LQIHKQMLEKNCC-NVVTWNILVHGLCV-DDRLSDAETMLLTMVDEGFIPDFVTYGTLVD 477
Query: 446 GYCEEGNVENVMQIAHEMV 464
C+ G +++ E V
Sbjct: 478 AMCKCGKSAAALELFEEAV 496
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 132/276 (47%), Gaps = 31/276 (11%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M + N+ YN ++ ++ ++A EM+++ C+P+ T+ ++ GLC + ++++
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A+ L+ +M+ G + + + +++ G F QA +L +++ + P V +Y +++
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G CK ++ +A+ LL EMR +G P ++++N + L E +LD A +L++M P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180
Query: 400 NFVSYNTIICGLCMA-------------------------------KGRMQDVEDLVDRM 428
+ V+YN+ I GLC G + ++D M
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHM 240
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G D YS L+ G+C+ G VE M + M+
Sbjct: 241 SNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 276
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 136/288 (47%), Gaps = 16/288 (5%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + G V+ A+ ++ + +YNSLLG L R+ I AE+ ++ +
Sbjct: 253 SSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMER 312
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PN----------LLAYNTMI 233
P DV +Y I G CK ++ AK VFD M + PN +L Y ++
Sbjct: 313 RGFTP-DVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLL 371
Query: 234 NGFCKKGELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+G CK G +EA +++++ C P+ YN M+ C ++D+A + +M L
Sbjct: 372 DGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM-LEKN 430
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
NV T ++ GLCV + A L +++ PD +Y +++ CK GKS A+
Sbjct: 431 CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE 490
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
L +E G P V +++A+ LV + A LL ++ + +P+
Sbjct: 491 LFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPD 538
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 1/176 (0%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G++ NV T+ +L L + D+A + +++ + PD ++ +++ G C+ + ++A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
LL M+ G P +NA+ + + +A L +M + CLP V+Y I+ G
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC A+ R +D L+D M G + + Y+ +++G CEE ++ ++ EM +
Sbjct: 122 LCKAE-RTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR 176
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y LL L + A F +++ E + PDV Y M+ +CK I+ A ++ M
Sbjct: 367 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 426
Query: 221 TVKP--NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
K N++ +N +++G C L +A+ + M++ G P+ +TY ++ +C G+
Sbjct: 427 LEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSA 486
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
A L + G +V T+ +++ GL ++A ++E PD K+
Sbjct: 487 AALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKT 541
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 202/383 (52%), Gaps = 26/383 (6%)
Query: 92 TPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFH 147
T Y+ + L + S + +A L +K ++D + + ++ ++ G ++ A WF+
Sbjct: 483 TSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ +++ + +Y +L+ ++ + A E F ++ E +P ++ TY+ +I G+CK
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP-NIVTYSALIDGHCKA 601
Query: 208 GMIENAKKVFDVM--------------------TVKPNLLAYNTMINGFCKKGELEEAKK 247
G +E A ++F+ M + +PN++ Y +++GFCK +EEA+K
Sbjct: 602 GQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARK 661
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
++ M GC PN++ Y+A+I GLC G++DEA+ + A+M +GF + T+ S++
Sbjct: 662 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYF 721
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
V + D A L ++E + P+V Y +I+G CK+GK+DEA L++ M +G +P V
Sbjct: 722 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 781
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++ A+ G+++ + LL++M PN+V+Y +I C G + +L++
Sbjct: 782 TYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLI-DHCCKNGALDVAHNLLEE 840
Query: 428 MIRSGHNLDFTMYSCLLKGYCEE 450
M ++ Y +++G+ +E
Sbjct: 841 MKQTHWPTHAAGYRKVIEGFNKE 863
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 204/506 (40%), Gaps = 86/506 (16%)
Query: 42 SSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDV 101
S + L QF L ++V +V+ P + FF WA Y HT+P Y A+ D+
Sbjct: 119 SQKFLRQFREKLSESLVIEVLRLIERPSAVISFFVWAGRQI----GYKHTSPVYNALVDL 174
Query: 102 LLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC 157
++ + LL+ + ++ F++ L++ Y G+ A+ + K
Sbjct: 175 IVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPS 234
Query: 158 LYSYNSLLGVLVRVNSIKLA--------------------------------EEFFHQIV 185
+YN L+ ++ + + A E +
Sbjct: 235 RSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLME 294
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
EN VP D YT +I G C+ + E A + M PN++ Y+T++ G K +L
Sbjct: 295 TENFVP-DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM--------------- 287
K+ +N MM GC P+ +N++++ C +G A L+ KM
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNIL 413
Query: 288 --RLNGFKDNVSTH------------------------KSMLKGLCVVGKFDQAVGYLRN 321
+ G KD++S H S + LC GK+++A +R
Sbjct: 414 IGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
++ PD +Y V+ C K + A L +EM+ GL V+++ + + G
Sbjct: 474 MIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+++A +M ++ C PN V+Y +I AK ++ +L + M+ G + YS
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK-KVSYANELFETMLSEGCLPNIVTYS 592
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKK 467
L+ G+C+ G +E QI M K
Sbjct: 593 ALIDGHCKAGQMEKACQIFERMCGSK 618
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 167/381 (43%), Gaps = 31/381 (8%)
Query: 111 AASLLKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV 169
A +L++ N + D F +KLI + + A+ + ++ + + +Y++LL +
Sbjct: 289 ALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 348
Query: 170 RVNSIKLAEEFFHQIVKENVVP-PDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPN 225
+ + + ++ E P P + + +++ YC G A K+ M P
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPG 406
Query: 226 LLAYNTMINGFCKKGE------LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+ YN +I C + LE A+K +EM+ G N++ ++ LC G+ ++
Sbjct: 407 YVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEK 466
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A ++ +M GF + ST+ +L LC K + A + + DV +Y ++++
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
FCK G ++A EMR G P V ++ A+ ++ ++ A L + M CLP
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM-----------------YSC 442
N V+Y+ +I G C A G+M+ + +RM S D M Y
Sbjct: 587 NIVTYSALIDGHCKA-GQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGA 645
Query: 443 LLKGYCEEGNVENVMQIAHEM 463
LL G+C+ VE ++ M
Sbjct: 646 LLDGFCKLHRVEEARKLLDAM 666
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 138/292 (47%), Gaps = 45/292 (15%)
Query: 148 QAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+A+ E+G A LY+Y+SL+ +V LA + +++ EN P+V YT MI G C
Sbjct: 698 KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML-ENSCAPNVVIYTEMIDGLC 756
Query: 206 KMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
K+G + A K+ +M K PN++ Y MI+GF + G++E + + M ++G PN +
Sbjct: 757 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYV 816
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
TY +I C NG +D A L+ +M+ + + + ++ +++G +F +++G L +
Sbjct: 817 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEI 874
Query: 323 MEANMNPDVK-------------------------------------SYEVVINGFCKIG 345
+ + P + +Y +I C
Sbjct: 875 GQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 934
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
K D+A L EM +G+ P + +F ++ + L N ++ A+LLL + M C
Sbjct: 935 KVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMVC 986
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 205/415 (49%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S P + + HT Y + L +H ++S A SL++
Sbjct: 3 FFTWLSXPANST--FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S LI AY + G ++ AI + + + + +L L+++
Sbjct: 61 IXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++
Sbjct: 121 KYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I G C + D+A L +M
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G
Sbjct: 240 VKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLKP ++ + + G+LD A K+M Q + + V Y +I
Sbjct: 300 QAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLC-XEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 214/454 (47%), Gaps = 48/454 (10%)
Query: 46 LDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSH 105
L+ + L + V KV+ QT+ +AL FF WA Y H T Y + D+L
Sbjct: 174 LNSMAQDLNPDAVVKVLNLQTDAQNALRFFQWAD----KQEGYDHNTDAYFTMIDILGRA 229
Query: 106 SLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQI--ENGACLY 159
+ + SLL+ +++ + + +YG G K ++ F+ K++ E G
Sbjct: 230 KMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDT 289
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS+L LV+ + +AE F Q++ N V + TYT+MI+ + +E+A K+ D
Sbjct: 290 AYNSVLVSLVKNKKLDMAENLFAQMIN-NGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDD 348
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P+++ Y +I+ CK+ +E+A + +M GC PN TYNA+I GLC R
Sbjct: 349 MIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRR 408
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+EA L+ M G N+ T+ + GLC + + D+A + + P+ +Y
Sbjct: 409 PEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNT 468
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++NG+C+ + EA+ +LKEM P ++ + + LV+ +L A+ + +M
Sbjct: 469 LLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKG 528
Query: 397 CLPNFVSYNTIICGL---------------------------------CMA-KGRMQDVE 422
NF + N + GL C++ G M++ +
Sbjct: 529 YDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQ 588
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
L+ MI G++ + T Y+ ++KG+C +G +++
Sbjct: 589 ALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDA 622
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 142/288 (49%), Gaps = 7/288 (2%)
Query: 150 KQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
K ENG +Y+YN+L+ L V + A E ++++ VPP++ TYT + G CK+
Sbjct: 383 KMRENGCEPNIYTYNALIQGLCAVRRPEEALELV-TLMEQGGVPPNIYTYTILTHGLCKL 441
Query: 208 GMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
++ AK++F+ +KPN + YNT++NG+C+ L EA + EM C P+ +TY
Sbjct: 442 RRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTY 501
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+I GL ++ +A + +M G+ N T + +GL VG A + R + +
Sbjct: 502 TTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKD 561
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
Y + I+ G+ +EA +LL EM +G P + ++N + + G LD
Sbjct: 562 RGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDD 621
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
A +L M + P+ SYN +I +GR QD + L + G
Sbjct: 622 ADAMLNFMIENGIGPDTGSYNILIKEF-HNQGRTQDADQLYATALERG 668
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 43/266 (16%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y L L ++ + A+E F++ + + P V TY T++ GYC+ + A +
Sbjct: 428 IYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRV-TYNTLLNGYCRGSRLIEAMDIL 486
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL--- 271
M P+ + Y T+I G + +L +A + +EM N+G N T N + GL
Sbjct: 487 KEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARV 546
Query: 272 ------------------------------CIN--GRVDEAKMLMAKMRLNGFKDNVSTH 299
C++ G ++EA+ L+ +M G+ N++T+
Sbjct: 547 GNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTY 606
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+M+KG C G+ D A L ++E + PD SY ++I F G++ +A L
Sbjct: 607 NTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALE 666
Query: 360 RGL----KPTVFSFNAVFRILVENGE 381
RG+ KP + + + LV + E
Sbjct: 667 RGVVLNPKPVIQEPDELPEGLVRSQE 692
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 195/395 (49%), Gaps = 44/395 (11%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
S+ +LK + + ++ L+K +G VK ++ FH K + G + SY LL
Sbjct: 66 SVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSL-HFHD-KVVAQGFQMDQVSYGILLN 123
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
L ++ + A + I ++ PDV Y+T+I G CK +++ A ++ M +
Sbjct: 124 GLCKIGETRCAIKLLRTI-EDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIF 182
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ Y T+I GFC G+L EA +NEM+ + PN TYN +I LC G+V E+K L
Sbjct: 183 PDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNL 242
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+A M G K +V + ++ G C+VG+ +A +++ +NPDV SY ++ING CK
Sbjct: 243 LAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCK 302
Query: 344 IGKSDEAISLL-----------------------------------KEMRARGLKPTVFS 368
+ DEA++LL KEM RG + +
Sbjct: 303 GKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVT 362
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N++ L +N LD+AI L +M + PN +Y +I GLC GR++ + L +
Sbjct: 363 YNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG-GRLKKGQALFQHL 421
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G+ +D Y+ ++ G C+EG + + + +M
Sbjct: 422 LVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKM 456
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 169/345 (48%), Gaps = 9/345 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDF----FISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ I D L L+ A L N F + LI + G + A ++
Sbjct: 153 YSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMI 212
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+Y+YN+L+ L + +K ++ + K+ V PDV Y+ ++ GYC +G +
Sbjct: 213 LKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGV-KPDVVIYSILMDGYCLVGEV 271
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ AK++F VM V P++ +YN +ING CK ++EA + EM+++ P+ +TY+++
Sbjct: 272 QKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSL 331
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC GR+ L +M G N+ T+ S+L GLC D+A+ + E +
Sbjct: 332 IDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGI 391
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P+ +Y +I+G CK G+ + +L + + +G V+++ + L + G D A+
Sbjct: 392 QPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALA 451
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ +M C+PN V++ II L + K E L+ MI G
Sbjct: 452 MKSKMEDNGCIPNAVTFEIIIRSL-LEKDENDKAEKLLHEMIAKG 495
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 133/250 (53%), Gaps = 1/250 (0%)
Query: 215 KVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
K + + P+L+ + +IN FC G++ + + +++ G +PN + N ++ GLC+
Sbjct: 34 KQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLK 93
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G V ++ K+ GF+ + ++ +L GLC +G+ A+ LR + + + PDV Y
Sbjct: 94 GEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMY 153
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G CK DEA L EM ARG+ P V ++ + G+L A LL +M
Sbjct: 154 STIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMIL 213
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ PN +YNT+I LC +G++++ ++L+ M + G D +YS L+ GYC G V+
Sbjct: 214 KNINPNIYTYNTLIDTLC-KEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQ 272
Query: 455 NVMQIAHEMV 464
QI MV
Sbjct: 273 KAKQIFLVMV 282
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 123/245 (50%), Gaps = 2/245 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P ++ + ++ K +M +G P+ +T + +I C G++ + +
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ K+ G++ N +++KGLC+ G+ +++ + V+ D SY +++NG CK
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
IG++ AI LL+ + R +P V ++ + L ++ +D A L +M P+ ++
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y T+ICG C+A G++ + L++ MI N + Y+ L+ C+EG V+ + M
Sbjct: 188 YTTLICGFCLA-GQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246
Query: 464 VTKKG 468
TKKG
Sbjct: 247 -TKKG 250
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P + + ++ K+ ISL K+M A+G+ P + + + + G++ + +
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
L ++ ++ PN + NT++ GLC+ KG ++ D+++ G +D Y LL G C
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCL-KGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126
Query: 449 EEGNVENVMQIAHEMVTKKGR 469
+ G +++ + + R
Sbjct: 127 KIGETRCAIKLLRTIEDRSTR 147
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 165/311 (53%), Gaps = 5/311 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ ++ E ++ + + PD TY T+I G+CK+G +E+A KVFD
Sbjct: 149 TYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDE 208
Query: 220 M----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M V+PN + YN +I G+C +G LE A + EM++RG TYN ++ L + G
Sbjct: 209 MLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEG 268
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R EA L+ +M G + T+ ++ G C GK +A+ ++ + V +Y
Sbjct: 269 RAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYT 328
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+ G E L + RG++P +F +NA+ G++DRA ++ +M +
Sbjct: 329 SLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKK 388
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ V+YNT++ GLC+ GR+ + L++ M + G D Y+ L+ GY +G++++
Sbjct: 389 RITPDDVTYNTLMRGLCLL-GRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKD 447
Query: 456 VMQIAHEMVTK 466
+++ EM+ K
Sbjct: 448 AVKVRDEMMGK 458
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 158/301 (52%), Gaps = 8/301 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y D+GN++ A+ + + + ++ G + +YN + L A ++
Sbjct: 225 LIGGYCDQGNLEVALRY--RGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEM-G 281
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
E + PD TY +I GYCK G + A K+F+VM ++ ++ Y ++I+ KG ++
Sbjct: 282 EKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQ 341
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
E + N+ + RG RP+ YNA+I C G +D A +M +M + T+ +++
Sbjct: 342 ETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLM 401
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+GLC++G+ D+A G + + + + PD+ SY +I+G+ G +A+ + EM +G
Sbjct: 402 RGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFN 461
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
PT+ ++NA+ + L NG+ A L+K+M P+ +Y ++I GL R+ +D
Sbjct: 462 PTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDERLAAGDD 521
Query: 424 L 424
+
Sbjct: 522 V 522
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 180/403 (44%), Gaps = 48/403 (11%)
Query: 93 PCYTAITDVLLSHSLIS----IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQ 148
P T +++L H + A LL+ + + +I + RG V+A I +
Sbjct: 113 PLSTTTFNIMLRHLCTAGKPVRALELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMRE 172
Query: 149 AKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+ E G Y+Y +++ +V ++ A + F +++ E V P+ Y +I GYC
Sbjct: 173 MR--ERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYC 230
Query: 206 KMGMIENAKKVFDVMT--------------------------------------VKPNLL 227
G +E A + M + P+
Sbjct: 231 DQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAF 290
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YN +ING+CK+G+ ++A K M+ +G R +TY ++I+ L + G V E L
Sbjct: 291 TYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDA 350
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
G + ++ + +++ C G D+A + + + + PD +Y ++ G C +G+
Sbjct: 351 VRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRL 410
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
DEA L++EM RG++P + S+N + G++ A+ + +M P ++YN +
Sbjct: 411 DEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAM 470
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
I GLC+ G+ D EDLV M+ +G D + Y L++G E
Sbjct: 471 IKGLCL-NGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTE 512
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ-DVEDLVD 426
+FN + R L G+ RA+ LL+QMP PN V+YNT+I G C A+GR+Q +E + +
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFC-ARGRVQAGIEIMRE 172
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R G D Y+ ++ G+C+ G VE+ ++ EM+T+
Sbjct: 173 MRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTE 212
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 204/415 (49%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y A+ L SH + S A SL++
Sbjct: 3 FFTWLSSPANST--FRHTLHSYCAMIHFLCSHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++
Sbjct: 121 KYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L+E + + M G P+ TY+ +I GLC ++D+A L +M
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G N T +++ G C G D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 240 EKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM GLKP ++ + + G+LD A K M Q + + V+Y +I
Sbjct: 300 QAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLCQ-EGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEM 413
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 207/415 (49%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y + L +H ++ A SL++
Sbjct: 3 FFTWLSSPANST--FRHTLHSYCTMIHFLCTHQMLWEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++
Sbjct: 121 KYFKLVWGFYKEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D+A L +M
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 240 VKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+ L+ EM +GLKP ++ + + G+LD A KQM Q + + V+Y +I
Sbjct: 300 QVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLC-QEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 168/309 (54%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ ++ ++ A F ++ K + PD TYT +I G C+ G + A K+F M
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKI-SPDFITYTAVICGLCQTGRVMEADKLFHEM 419
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K P+ + Y +I+G+CK+G+++EA N+M+ G PN +TY A+ GLC G V
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 479
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A L+ +M G + N+ T+ S++ GLC G DQAV ++++ A +PD +Y +
Sbjct: 480 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++ +CK + A LL++M R L+PTV +FN + +G L+ LLK M +
Sbjct: 540 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 599
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+PN +YN++I C+ + M+ ++ M G D Y+ L+KG+C+ N++
Sbjct: 600 MPNATTYNSLIKQYCI-RNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 658
Query: 458 QIAHEMVTK 466
+ +MV K
Sbjct: 659 FLHRDMVGK 667
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 197/418 (47%), Gaps = 31/418 (7%)
Query: 72 LFFFNWAS-NPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSN---KLS-DFFI 126
L FF WA +P+ TA D+ ++ LI N N +S F+
Sbjct: 112 LSFFEWACLRRDPSLEARCIVAQIATASKDLKMARKLIQ---DFWVNPNLDVGVSFGHFV 168
Query: 127 SKLIKAYGDRGNVKAAIFWFHQ----AKQIENGACLYSYNSLLGVLVRVNS--------- 173
+LI Y D G+ F Q A ++ L+ G+L+ V+S
Sbjct: 169 EQLIYTYKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLS 228
Query: 174 -----IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PN 225
IK+A + F + E V + ++Y + C++G + A ++ M ++ P+
Sbjct: 229 EDLDGIKIALKVFVEF-PEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPD 287
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+++Y+T+ING+C+ GEL+ K + EM +G +PN TYN +I LC G+V EA+ ++
Sbjct: 288 VISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLR 347
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M G + + +++ G C +G A + + ++PD +Y VI G C+ G
Sbjct: 348 EMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTG 407
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ EA L EM + L+P ++ A+ + G++ A L QM QM PN V+Y
Sbjct: 408 RVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYT 467
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ GLC G + +L+ M R G L+ Y+ L+ G C+ GN++ +++ +M
Sbjct: 468 ALADGLCKC-GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM 524
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 184/419 (43%), Gaps = 82/419 (19%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEF 180
+ FIS L + D +K A+ F + ++ G C SYN + L ++ + A +
Sbjct: 221 NLFISHLSE---DLDGIKIALKVFVEFPEV--GVCWNTASYNIITHSLCQLGRVVEAHQL 275
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----------------- 223
Q+ +P DV +Y+T+I GYC++G ++ K+ + M +K
Sbjct: 276 LLQMELRGCIP-DVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLC 334
Query: 224 ---------------------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
P+ + Y T+I+GFCK G + A + +EM R P+ +
Sbjct: 335 KTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFI 394
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKM---RLN----------------------------- 290
TY A+I GLC GRV EA L +M RL
Sbjct: 395 TYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 454
Query: 291 ---GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
G N+ T+ ++ GLC G+ D A L + + ++ +Y ++NG CK G
Sbjct: 455 LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNI 514
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
D+A+ L+K+M G P ++ + ++ E+ RA LL+QM + P V++N +
Sbjct: 515 DQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVL 574
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ G CM+ G ++D E L+ M+ G + T Y+ L+K YC N+ +I M K
Sbjct: 575 MNGFCMS-GMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 632
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 150/306 (49%), Gaps = 5/306 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y G +K A +Q Q+ + +Y +L L + + A E H++ +
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELE 243
+ + ++ TY +++ G CK G I+ A K+ M V P+ + Y T+++ +CK E+
Sbjct: 492 KGL-ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMV 550
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + + +M++R +P +T+N ++ G C++G +++ + L+ M G N +T+ S++
Sbjct: 551 RAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLI 610
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
K C+ R + + PD +Y ++I G CK EA L ++M +G
Sbjct: 611 KQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFN 670
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
TV S+NA+ + + + A L +QM + + + YN I + +G+M+ +
Sbjct: 671 LTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN-IFADINYDEGKMELTLE 729
Query: 424 LVDRMI 429
L D I
Sbjct: 730 LCDEAI 735
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 40/264 (15%)
Query: 208 GMIENAKKVFDVMTVKPNLLAY---NTMINGFCKKGE-LEEAKKCMNEMMNRGCRPNELT 263
GM++ A+K+FD M L++ N I+ + + ++ A K E G N +
Sbjct: 196 GMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTAS 255
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YN + + LC GRV EA L+ +M L G C+
Sbjct: 256 YNIITHSLCQLGRVVEAHQLLLQMELRG---------------CI--------------- 285
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
PDV SY VING+C++G+ + L++EM+ +GLKP +++N V +L + G++
Sbjct: 286 -----PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVA 340
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A +L++M P+ V Y T+I G C G + L D M + + DF Y+ +
Sbjct: 341 EAERVLREMISEGIAPDGVIYTTLIDGFCKL-GNVSSAYRLFDEMQKRKISPDFITYTAV 399
Query: 444 LKGYCEEGNVENVMQIAHEMVTKK 467
+ G C+ G V ++ HEMV K+
Sbjct: 400 ICGLCQTGRVMEADKLFHEMVCKR 423
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 167/303 (55%), Gaps = 5/303 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S+N+++ + R + AE H+ + E V PDV TY +I+G C++G IE+A+ VF+
Sbjct: 277 SFNTMISGMCRAGDLDGAETL-HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEK 335
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KPN + + +I+ CKKG+ E + EM RG RP+ +TYNA++ GLC
Sbjct: 336 MCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARD 395
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ A ++ +MR G + + T+ +++ G C + D A+ +N++ + D +Y
Sbjct: 396 LKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTA 455
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G K G+S +A +L EM GL+P ++ V G++ + LLK+M
Sbjct: 456 LISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKG 515
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P V+YN I+ G C G+M++ + L++ MI G + D Y+ LL G+C+ G V ++
Sbjct: 516 RKPGVVTYNVIMNGFCKL-GQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDI 574
Query: 457 MQI 459
++
Sbjct: 575 EEL 577
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 159/311 (51%), Gaps = 6/311 (1%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
S G++ R + A F+ Q++ + PP+ + ++R ++G + +A+ VFD M
Sbjct: 209 TSCTGLMSRFPTAPEACAFYLQLLDAGL-PPEAKLFNVLMRDLVRLGELASAQNVFDEMQ 267
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
V+ ++++NTMI+G C+ G+L+ A+ M G P+ TY A+I GLC GR++
Sbjct: 268 SRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIE 327
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A+ + KM G K N ++ C G + + R + E + PD +Y ++
Sbjct: 328 DARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIV 387
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG C+ A ++ EMR+ GL+P ++ + + ELD A+ + + M
Sbjct: 388 NGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVG 447
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
+ V+Y +I GL A GR D E ++ M+ +G D T Y+ ++ +C +G+V+ ++
Sbjct: 448 LDEVTYTALISGLSKA-GRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLR 506
Query: 459 IAHEMVTKKGR 469
+ EM KGR
Sbjct: 507 LLKEM-QNKGR 516
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I A+ +G+VK + + + + +YN ++ ++ +K A+ + ++
Sbjct: 491 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 550
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKK 239
V P D+ TY ++ G+CK G + + +++ P+L Y +++ KK
Sbjct: 551 VSPDDI-TYNILLDGHCKHGKVTDIEELKSAKGTVPDLGVYTSIVGEIVKK 600
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 172/306 (56%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ + + + A + + Q+V + + P DV TY +I G+ + + A +F+ M
Sbjct: 204 YNMIIDNMCKAKLVNDAFDLYSQMVAKRICP-DVFTYNALISGFSAVSKLNYAIDLFNKM 262
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN+ +N +++GFCK+G++ +AK + MM +P+ +TYN+++ G C +V
Sbjct: 263 KKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKV 322
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
++AK + M G NV + +M+ G C + D+A+ + + P+V +Y +
Sbjct: 323 NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSL 382
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G CK+G+ A+ L+ EM RG P + +++++ L +N +D+AI LL +
Sbjct: 383 IDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ +Y +I GLC + GR++D +++ + ++ G+NLD Y+ +++G+C++G + +
Sbjct: 443 RPDMYTYTILIKGLCQS-GRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501
Query: 458 QIAHEM 463
+ +M
Sbjct: 502 ALLSKM 507
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 188/368 (51%), Gaps = 19/368 (5%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
SI A +LK + + LIK +G++ A+ FH K + G L SY +L+
Sbjct: 117 SIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQAL-HFHD-KVVAQGFHLDQVSYGTLIN 174
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
L +V I A + + V +V P+ Y +I CK ++ +A ++ M K
Sbjct: 175 GLCKVGRITAALQLLKR-VDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRIC 233
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P++ YN +I+GF +L A N+M PN T+N ++ G C G+V++AK++
Sbjct: 234 PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVV 293
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+A M + K +V T+ S++ G C + K ++A ++ + +V+ Y ++NGFCK
Sbjct: 294 LAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCK 353
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
I DEAI+L +EMR R + P V +++++ L + G + A+ L+ +M PN V+
Sbjct: 354 IKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVT 413
Query: 404 YNTIICGLCMAKGRMQD-----VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
Y++I+ LC K D + +L D+ IR D Y+ L+KG C+ G +E+
Sbjct: 414 YSSILDALC--KNHHVDKAIALLTNLKDQGIRP----DMYTYTILIKGLCQSGRLEDAQN 467
Query: 459 IAHEMVTK 466
+ +++ K
Sbjct: 468 VFEDLLVK 475
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 162/312 (51%), Gaps = 5/312 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI + + AI F++ K+ +Y++N L+ + + A+
Sbjct: 237 FTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAI 296
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
++K+++ PDV TY +++ GYC + + AK +FD M V N+ Y TM+NGFCK
Sbjct: 297 MMKDDI-KPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIK 355
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++EA EM R PN +TY+++I GLC GR+ A L+ +M G N+ T+
Sbjct: 356 MVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYS 415
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S+L LC D+A+ L N+ + + PD+ +Y ++I G C+ G+ ++A ++ +++ +
Sbjct: 416 SILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVK 475
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G V+++ + + + G D+A+ LL +M C+PN +Y +I L K
Sbjct: 476 GYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSL-FEKDENDT 534
Query: 421 VEDLVDRMIRSG 432
E L+ MI G
Sbjct: 535 AEKLLREMIVRG 546
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 123/241 (51%), Gaps = 39/241 (16%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ +N + A++ F + V+ +V YTTM+ G+CK+ M++ A +F+
Sbjct: 308 TYNSLMDGYCSINKVNKAKDIFDSMASGGVIA-NVQIYTTMVNGFCKIKMVDEAINLFEE 366
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-------------------- 256
M + PN++ Y+++I+G CK G + A K ++EM +RG
Sbjct: 367 MRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHH 426
Query: 257 ---------------CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
RP+ TY +I GLC +GR+++A+ + + + G+ +V +
Sbjct: 427 VDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTV 486
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
M++G C G FD+A+ L + + P+ K+YE+VI + ++D A LL+EM RG
Sbjct: 487 MIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRG 546
Query: 362 L 362
L
Sbjct: 547 L 547
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 138/293 (47%), Gaps = 5/293 (1%)
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTM 232
L F H ++ +N PP + ++ K A + M ++ + +N +
Sbjct: 44 LISSFNHLLLHKNPTPPTFQ-FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNIL 102
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
IN F + G + +++ +G P +T+N +I GLC+ G + +A K+ GF
Sbjct: 103 INCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGF 162
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ ++ +++ GLC VG+ A+ L+ V + P+ Y ++I+ CK ++A
Sbjct: 163 HLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFD 222
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
L +M A+ + P VF++NA+ +L+ AI L +M + + PN ++N ++ G C
Sbjct: 223 LYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFC 282
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+G++ D + ++ M++ D Y+ L+ GYC V I M +
Sbjct: 283 -KEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMAS 334
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 168/309 (54%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ ++ ++ A F ++ K + PD TYT +I G C+ G + A K+F M
Sbjct: 261 YTTLIDGFCKLGNVSSAYRLFDEMQKRKI-SPDFITYTAVICGLCQTGRVMEADKLFHEM 319
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K P+ + Y +I+G+CK+G+++EA N+M+ G PN +TY A+ GLC G V
Sbjct: 320 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 379
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A L+ +M G + N+ T+ S++ GLC G DQAV ++++ A +PD +Y +
Sbjct: 380 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 439
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++ +CK + A LL++M R L+PTV +FN + +G L+ LLK M +
Sbjct: 440 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 499
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+PN +YN++I C+ + M+ ++ M G D Y+ L+KG+C+ N++
Sbjct: 500 MPNATTYNSLIKQYCI-RNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 558
Query: 458 QIAHEMVTK 466
+ +MV K
Sbjct: 559 FLHRDMVGK 567
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 157/334 (47%), Gaps = 42/334 (12%)
Query: 174 IKLAEEFFHQIVKENVVP---PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLL 227
I L E+ ++++E + P+ TY +I CK G + A++V M + P+ +
Sbjct: 200 IALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGV 259
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
Y T+I+GFCK G + A + +EM R P+ +TY A+I GLC GRV EA L +M
Sbjct: 260 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 319
Query: 288 ---RLN--------------------------------GFKDNVSTHKSMLKGLCVVGKF 312
RL G N+ T+ ++ GLC G+
Sbjct: 320 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 379
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D A L + + ++ +Y ++NG CK G D+A+ L+K+M G P ++ +
Sbjct: 380 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 439
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
++ E+ RA LL+QM + P V++N ++ G CM+ G ++D E L+ M+ G
Sbjct: 440 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMS-GMLEDGEKLLKWMLEKG 498
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ T Y+ L+K YC N+ +I M K
Sbjct: 499 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 532
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 150/306 (49%), Gaps = 5/306 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y G +K A +Q Q+ + +Y +L L + + A E H++ +
Sbjct: 332 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 391
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELE 243
+ + ++ TY +++ G CK G I+ A K+ M V P+ + Y T+++ +CK E+
Sbjct: 392 KGL-ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMV 450
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + + +M++R +P +T+N ++ G C++G +++ + L+ M G N +T+ S++
Sbjct: 451 RAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLI 510
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
K C+ R + + PD +Y ++I G CK EA L ++M +G
Sbjct: 511 KQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFN 570
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
TV S+NA+ + + + A L +QM + + + YN I + +G+M+ +
Sbjct: 571 LTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN-IFADINYDEGKMELTLE 629
Query: 424 LVDRMI 429
L D I
Sbjct: 630 LCDEAI 635
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
N+ ++++ D+ ++ + G + + L++EM+ +GLKP +++N V +L + G
Sbjct: 185 NLFISHLSEDLDGIKIALKG-------EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTG 237
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
++ A +L++M P+ V Y T+I G C G + L D M + + DF Y
Sbjct: 238 KVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL-GNVSSAYRLFDEMQKRKISPDFITY 296
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ ++ G C+ G V ++ HEMV K+
Sbjct: 297 TAVICGLCQTGRVMEADKLFHEMVCKR 323
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 166/311 (53%), Gaps = 5/311 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+ ++ L R SI+ A F +V V P+ YTT+I+G+ + G + A ++
Sbjct: 447 YTCGMIINGLCRHGSIEDASRVFEIMVSLGV-KPNAVIYTTLIKGHVQEGRFQEAVRILK 505
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
VM V+P++L YN++I G CK ++EEAK + EM+ RG +PN TY A+I+G C +G
Sbjct: 506 VMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSG 565
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ A +M G N +++ G C G +A R ++ +++PDV++Y
Sbjct: 566 EMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYS 625
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+G + GK A+ LL E +GL P VF++N++ + G + +A L + M Q
Sbjct: 626 ALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQK 685
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
PN ++YN +I GLC A G ++ +L D + G + Y+ ++ GYC+ GN+
Sbjct: 686 GISPNIITYNALINGLCKA-GEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSK 744
Query: 456 VMQIAHEMVTK 466
++ EM K
Sbjct: 745 AFRLFDEMTLK 755
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 181/351 (51%), Gaps = 6/351 (1%)
Query: 118 SNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKL 176
+N L D + + LI A+ GN K + ++ L +YN ++G L R +
Sbjct: 230 ANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDE 289
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMI 233
A E + K+ +V DV TY+ +I G+ K AK + + M +KP +AY +I
Sbjct: 290 AFELKKLMDKKGLVA-DVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALI 348
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+GF ++G+ EA + EM+ RG + N TYNA++ G+C G +++A L+ +M + G K
Sbjct: 349 DGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIK 408
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ T+ +M++G + L + ++N+ P + ++ING C+ G ++A +
Sbjct: 409 PDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRV 468
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
+ M + G+KP + + + V+ G A+ +LK M + P+ + YN++I GLC
Sbjct: 469 FEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCK 528
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
++ +M++ +D + MI G + Y L+ GYC+ G ++ + EM+
Sbjct: 529 SR-KMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEML 578
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 190/398 (47%), Gaps = 20/398 (5%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
+D + LI Y G+ A F + +Y++L+ L+R ++ A E
Sbjct: 585 NDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELL 644
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
+ +++ +VP DV TY ++I G+CK G I A ++ + M K PN++ YN +ING CK
Sbjct: 645 SEFLEKGLVP-DVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCK 703
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
GE+E A++ + + +G N +TY +I G C +G + +A L +M L G +
Sbjct: 704 AGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFV 763
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ G G ++A+ ++ S +++GFCK GK EA LL++M
Sbjct: 764 YSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMV 822
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+ +KP ++ + + G L A M + + +PN ++Y ++ G MA GR
Sbjct: 823 DKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMA-GRR 881
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLT 478
++ L D MI D +S ++ + +EG+ +++ +M+ K G + KN
Sbjct: 882 SEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNV--SKNVCH 939
Query: 479 RVVDALLLMWIVTGGSWISRFVFVHQVVVIMERTVEDG 516
++D L R V +V+ ++E+ E G
Sbjct: 940 VLIDPL------------CRKEHVSEVLKVLEKIEEQG 965
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 161/313 (51%), Gaps = 14/313 (4%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y +L+ + +++A+ +F +++ + P DV T +I GYCK G A +F
Sbjct: 551 VYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDV-VCTALIDGYCKEGSTTEATSIF 609
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M +V P++ Y+ +I+G + G+L+ A + ++E + +G P+ TYN++I G C
Sbjct: 610 RCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQ 669
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + +A L M G N+ T+ +++ GLC G+ ++A + + + +Y
Sbjct: 670 GGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTY 729
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G+CK G +A L EM +G+ P F ++A+ + G ++A+ L + Q
Sbjct: 730 ATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ 789
Query: 395 MDCLPNFVSYNTIICGLCMAKGRM----QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+ S N ++ G C + G++ Q +ED+VD+ ++ H Y+ L+ +C+
Sbjct: 790 KG-FASTSSLNALMDGFCKS-GKVIEANQLLEDMVDKHVKPDH----VTYTILIDYHCKT 843
Query: 451 GNVENVMQIAHEM 463
G ++ Q +M
Sbjct: 844 GFLKEAEQFFVDM 856
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 155/309 (50%), Gaps = 6/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YNS++ L + ++ A+++ +++ E + P+V TY +I GYCK G ++ A + F M
Sbjct: 519 YNSVIIGLCKSRKMEEAKDYLVEMI-ERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEM 577
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN + +I+G+CK+G EA M+ R P+ TY+A+I+GL NG++
Sbjct: 578 LGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKL 637
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A L+++ G +V T+ S++ G C G +A + + ++P++ +Y +
Sbjct: 638 QGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNAL 697
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
ING CK G+ + A L + +GL ++ + ++G L +A L +M
Sbjct: 698 INGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGV 757
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ Y+ +I G C +G + L ++ G ++ + L+ G+C+ G V
Sbjct: 758 PPDSFVYSALIDG-CRKEGNTEKALSLFLESVQKGFASTSSL-NALMDGFCKSGKVIEAN 815
Query: 458 QIAHEMVTK 466
Q+ +MV K
Sbjct: 816 QLLEDMVDK 824
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 163/352 (46%), Gaps = 17/352 (4%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQ--AKQIENGACLYSYNSLLGVLVRVN----SIKLA 177
F S LI +G + A + +K ++ G +Y +L+ +R + ++
Sbjct: 307 FTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHV--AYTALIDGFMRQGDSGEAFRVK 364
Query: 178 EEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMIN 234
EE + VK N+ TY +++G CK G +E A + + M +KP+ YN MI
Sbjct: 365 EEMLARGVKLNLF-----TYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIE 419
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
G+ K+ K ++EM P T +I GLC +G +++A + M G K
Sbjct: 420 GYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKP 479
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N + +++KG G+F +AV L+ + + + PDV Y VI G CK K +EA L
Sbjct: 480 NAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYL 539
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
EM RGLKP V+++ A+ ++GE+ A K+M PN V +I G C
Sbjct: 540 VEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYC-K 598
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+G + + M+ + D YS L+ G G ++ M++ E + K
Sbjct: 599 EGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEK 650
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 8/272 (2%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVKPN-----LLAYNTMINGFCKKGELEEAKKCMNE 251
+ +I GY K G+ + A F + K N LL N +++ K +LE + N
Sbjct: 169 FELLIDGYKKKGLFDEAVSFF--LGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ + TY +I G E K L+ +M G ++ T+ ++ GLC G+
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+A + + + + DV +Y ++I+GF K + EA +L+EM ++GLKP ++ A
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ + G+ A + ++M N +YN ++ G+C G M+ + L++ MI
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKF-GDMEKADALLNEMIMV 405
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G D Y+ +++GY +E N V + EM
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 130/285 (45%), Gaps = 5/285 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I Y GN+ A F + + Y++L+ + + + A F + V+
Sbjct: 730 ATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ 789
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ S+ ++ G+CK G + A ++ + M VKP+ + Y +I+ CK G L+
Sbjct: 790 KGFAS--TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLK 847
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA++ +M R PN LTY A++ G + GR E L +M + + T M+
Sbjct: 848 EAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMI 907
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G + + + ++++ N V+I+ C+ E + +L+++ +GL
Sbjct: 908 DAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLN 967
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
++ + + + R + G++D A +LK M + +P+ N +I
Sbjct: 968 LSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 1/209 (0%)
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+ + +I G G DEA + NGF + +L L K + +
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
++EAN+ DV +Y +IN + G + E LL EM +G P++ ++N V L GE
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+D A L K M + + + +Y+ +I G K R + + +++ M G Y+
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQK-RCTEAKLMLEEMFSKGLKPGHVAYT 345
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
L+ G+ +G+ ++ EM+ + +L
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGVKL 374
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 4/201 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y L+ + +K AE+FF + K N++P + TYT ++ GY G +FD
Sbjct: 832 TYTILIDYHCKTGFLKEAEQFFVDMQKRNLMP-NALTYTALLSGYNMAGRRSEMFALFDE 890
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+ + ++ MI+ K+G+ + K +++M+ +G ++ + +I LC
Sbjct: 891 MIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEH 950
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V E ++ K+ G +++T ++++ GK D A L++++ PD
Sbjct: 951 VSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELND 1010
Query: 337 VINGFCKIGKSDEAISLLKEM 357
+IN S+ A LK+M
Sbjct: 1011 LINVEQDSTDSENAGDFLKQM 1031
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 204/411 (49%), Gaps = 35/411 (8%)
Query: 68 PYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----KNSN---K 120
P AL FFNWA + H Y + ++L +++A + L + SN K
Sbjct: 99 PSKALQFFNWAPELG-----FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVK 153
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
L D F + LI++YG G + ++ F+ K + + ++NSLL +L++ +A+
Sbjct: 154 LEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSV 213
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
F +++ V PD T+ +IRG+CK M++ + F M+ P+L+ YNT+++G C
Sbjct: 214 FDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLC 273
Query: 238 KKGELEEAKKCMNEMMNRGC--RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
+ G++ A +N M+ + P+ +TY ++ G C+ +DEA ++ +M G K N
Sbjct: 274 RAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPN 333
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN-----PDVKSYEVVINGFCKIGKSDEA 350
T+ +++KGLC V K D+ ++ + E + PD + ++N C G ++A
Sbjct: 334 EITYNTLIKGLCEVQKIDK----IKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDA 389
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD-------CLPNFVS 403
+ + ++M ++P +++ + R L + G +RA L ++ + + C P +
Sbjct: 390 LEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAA 449
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
Y ++ LC G+ E + ++++ G D + L+KG+C EG E
Sbjct: 450 YKSMFEFLC-RNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFE 498
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 256 GCRPNELTYNAM--IYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGKF 312
G N+ +Y M I G N V + K R NG K S+++ G F
Sbjct: 113 GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGLF 172
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR-GLKPTVFSFNA 371
++V ++ ++P V ++ ++ K G+++ A S+ EM + G+ P ++FN
Sbjct: 173 QESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNI 232
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ R +N +D K+M + C P+ V+YNT++ GLC A G++ ++V+ M++
Sbjct: 233 LIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRA-GKVNIAHNVVNGMVKK 291
Query: 432 GHNL--DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
NL D Y+ L++GYC + ++ + + EMV+K
Sbjct: 292 STNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSK 328
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 163/400 (40%), Gaps = 24/400 (6%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
++ L+ A+ + GN+ A+ F + + +Y+ L+ L + + + AE+ F ++
Sbjct: 373 LNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELS 432
Query: 186 KENVV------PPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFC 237
++ ++ P V+ Y +M C+ G A++VF + + + L++ +I G C
Sbjct: 433 EKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLSFKILIKGHC 492
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
++G E + + M+ R P+ TY ++I GL G A + KM + S
Sbjct: 493 REGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETS 552
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T S+L L G ++ ++ ++E + ++ + G D+A ++ +
Sbjct: 553 TFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLL 612
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY-----NTIICGLC 412
A G V + L N R LL ++ + CL + +T+I GLC
Sbjct: 613 YANGY---VVDMEELIGFLSHN----RKFLLAHKL-LLFCLEKHQNVDIDMCDTVIEGLC 664
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK--GRL 470
K R + L ++ G+N L G +E V ++ M K+ +
Sbjct: 665 KMK-RHSEAFGLYYELVEKGNNQPLRCLENLRVALEARGRLEEVKFLSKRMPNKRQPDKY 723
Query: 471 LKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVVIME 510
L+L ++ + M T I F + + V E
Sbjct: 724 LELPHWNWKWAIRYFRMQTATNSRMIESFTIFNGLPVFFE 763
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 176/347 (50%), Gaps = 40/347 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+YN L+ V ++ F ++ + N P+V TY T+I YCKMG I+ A +
Sbjct: 10 VYTYNILIRGFCSVGELQKGLGCFGEM-ERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 68
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M+ K PNL++YN +ING C++G ++EA + + EM +G P+E+TYN ++ G C
Sbjct: 69 KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 128
Query: 275 GRVDEAKMLMA-----------------------------------KMRLNGFKDNVSTH 299
G +A ++ A +MR+ G + N T+
Sbjct: 129 GNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 188
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G G ++A L + E+ +P V +Y I+G C + + +EA+ +++EM
Sbjct: 189 TTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE 248
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+GL P V S++ + GELDRA + ++M + P+ V+Y+++I GLC + R+
Sbjct: 249 KGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR-RLT 307
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ DL M+ G D Y+ L+ YC EG++ + + EM+ K
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHK 354
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 150/280 (53%), Gaps = 4/280 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
V P+V TY +IRG+C +G ++ F M PN++ YNT+I+ +CK G ++EA
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ M ++G +PN ++YN +I GLC G + EA ++ +M GF + T+ ++L G
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G F QA+ ++ ++P V +Y +IN CK + A+ +MR RGL+P
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++ + G L+ A +L +M + P+ V+YN I G C+ + RM++ +V
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE-RMEEALGVVQ 244
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M+ G D YS ++ G+C +G ++ Q+ EMV K
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 284
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 172/342 (50%), Gaps = 5/342 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY G + A L SYN ++ L R S+K A E ++ +
Sbjct: 51 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 110
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P +V TY T++ GYCK G A + M V P+++ Y +IN CK L A
Sbjct: 111 FTPDEV-TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 169
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++M RG RPNE TY +I G G ++EA ++ +M +GF +V T+ + + G
Sbjct: 170 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 229
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
CV+ + ++A+G ++ ++E + PDV SY +I+GFC+ G+ D A + +EM +G+ P
Sbjct: 230 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 289
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+++++ + L E L A L ++M M P+ +Y T+I C+ +G + L
Sbjct: 290 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV-EGDLNKALHLH 348
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D MI G D YS L+ G ++ ++ +++ ++
Sbjct: 349 DEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 390
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 178/356 (50%), Gaps = 24/356 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L+ Y GN A+ A+ + NG + +Y +L+ + + ++ A EFF Q+ +
Sbjct: 121 LLNGYCKEGNFHQALVI--HAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-R 177
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ P+ TYTT+I G+ + G++ A ++ + MT P+++ YN I+G C +E
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + EM+ +G P+ ++Y+ +I G C G +D A + +M G + T+ S++
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+GLC + + +A + +++ + PD +Y +IN +C G ++A+ L EM +G
Sbjct: 298 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL 357
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII--C------------ 409
P +++ + L + A LL ++ + +P+ V+Y+T+I C
Sbjct: 358 PDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALI 417
Query: 410 -GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G CM KG M + + + + M+ H +Y+ ++ G+C GN+ + EM+
Sbjct: 418 KGFCM-KGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMI 472
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 176/409 (43%), Gaps = 55/409 (13%)
Query: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL 164
H + I A +++N S + LI + N+ A+ +F Q + +Y +L
Sbjct: 132 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 191
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK- 223
+ R + A +++ E+ P V TY I G+C + +E A V M K
Sbjct: 192 IDGFSRQGLLNEAYRILNEMT-ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250
Query: 224 --PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
P++++Y+T+I+GFC+KGEL+ A + EM+ +G P+ +TY+++I GLC R+ EA
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 310
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV---- 337
L +M G + T+ +++ CV G ++A+ ++ PD +Y V+
Sbjct: 311 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 370
Query: 338 ----------------------------------------------INGFCKIGKSDEAI 351
I GFC G EA
Sbjct: 371 NKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 430
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+ + M R KP +N + G L +A L K+M +P+ V+ T+I L
Sbjct: 431 RVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 490
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+G +++ +++ +RS + + L++ +EGN+E V+ ++
Sbjct: 491 -FKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVS 538
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 108/213 (50%), Gaps = 1/213 (0%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ PN TYN +I G C G + + +M NG NV T+ +++ C +G+
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+A G L+++ M P++ SY V+ING C+ G EA +L+EM +G P ++N
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ + G +A+++ +M + P+ V+Y +I +C A+ + +E D+M
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAME-FFDQMRIR 179
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G + Y+ L+ G+ +G + +I +EM
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 212
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 171/344 (49%), Gaps = 40/344 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ + + ++ + L +++K + P + T+TT+I G CK+G A ++F
Sbjct: 128 IYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGL-QPTIVTFTTLINGLCKVGEFAQAVELF 186
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M K P++ YNT+ING CK GE A + +M GC+PN +TY+ +I LC +
Sbjct: 187 DDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRD 246
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
V+EA + + M+ G ++ T+ S+++GLC ++ +A L + N+ PD+ ++
Sbjct: 247 RLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTF 306
Query: 335 EVVINGFCKIGKSDEAISLLKEMR-----------------------------------A 359
V+++ FCK GK EA+ +LK M
Sbjct: 307 NVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMIT 366
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G KP +FS+N + + +D A+ L +M PN VSYNT+I G C G+++
Sbjct: 367 KGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL-GKLR 425
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ +DL M +G+ D YS LL G+C++G + ++ M
Sbjct: 426 EAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAM 469
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 151/310 (48%), Gaps = 39/310 (12%)
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP----------- 191
IF + +AK I +++Y SL+ L + + K A +++ N++P
Sbjct: 255 IFSYMKAKGISPD--IFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312
Query: 192 -----------------------PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PN 225
P+V TY++++ GY + A+K+F VM K PN
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPN 372
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+ +YN +ING+CK ++EA + NEM+++G PN ++YN +I+G C G++ EA+ L
Sbjct: 373 IFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
M NG ++ T+ +L G C G +A R + + P++ Y ++++ CK G
Sbjct: 433 NMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSG 492
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+A L E+ +GL+P V + + L + G LD A+ + M C P+ +SYN
Sbjct: 493 NHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYN 552
Query: 406 TIICGLCMAK 415
II GL K
Sbjct: 553 VIIRGLLQHK 562
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 172/335 (51%), Gaps = 14/335 (4%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS-----IKLAEEFFHQIVKENVVPP 192
N+ A+ F+ + C+ + LL +V++ I L+++ ++V + P
Sbjct: 72 NIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQM--ELVG---LSP 126
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
++ T + + +C++ ++ V + ++P ++ + T+ING CK GE +A +
Sbjct: 127 NIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELF 186
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++M+ +GC+P+ TYN +I GLC G A L+ KM G + N+ T+ +++ LC
Sbjct: 187 DDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRD 246
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
++A+ + ++PD+ +Y +I G CK + EA +LL EM + + P + +F
Sbjct: 247 RLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTF 306
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + + G++ A+ +LK M +M PN V+Y++++ G + ++ L MI
Sbjct: 307 NVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVE-ARKLFHVMI 365
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G + Y+ L+ GYC+ ++ MQ+ +EM+
Sbjct: 366 TKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMI 400
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++SYN L+ + I A + F++++ + + P +VS Y T+I G+C++G + A+ +F
Sbjct: 373 IFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVS-YNTLIHGFCQLGKLREAQDLF 431
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M P+L Y+ +++GFCK+G L +A + M + +PN + Y +++ +C +
Sbjct: 432 RNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKS 491
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +A+ L +++ + G + +V + +++ GLC G D+A+ RN+ PD SY
Sbjct: 492 GNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISY 551
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGL 362
V+I G + A+ L+ EMR RG
Sbjct: 552 NVIIRGLLQHKDESRALLLVGEMRDRGF 579
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 142/279 (50%), Gaps = 5/279 (1%)
Query: 192 PDVSTYTTMIRGYCKMG----MIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK 247
P + + ++ KMG ++ + K +++ + PN+ + +N FC+ ++
Sbjct: 90 PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFS 149
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ +++ G +P +T+ +I GLC G +A L M G + +V T+ +++ GLC
Sbjct: 150 VLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLC 209
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
+G+ A G L+ + EA P++ +Y +I+ C+ +EA+ + M+A+G+ P +F
Sbjct: 210 KIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIF 269
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++ ++ + L + A LL +M ++ +P+ V++N ++ C +G++ + ++
Sbjct: 270 TYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFC-KEGKVSEALGVLKT 328
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M G + YS L+ GY +V ++ H M+TK
Sbjct: 329 MTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITK 367
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G ++ A F N L++Y+ LL + + A F + ++
Sbjct: 414 LIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLF-RAMQST 472
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
+ P++ YT ++ CK G ++A+K+F V ++P++ Y T+ING CK+G L+EA
Sbjct: 473 YLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEA 532
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ M GC P+E++YN +I GL + A +L+ +MR GF +V
Sbjct: 533 LEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 239/497 (48%), Gaps = 42/497 (8%)
Query: 7 SLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQT 66
S ++ + IL T I+ I ++ NP+P + L + L S+ +T +I
Sbjct: 16 SFSSKPHYKNHDILYT-ISESINTIHNNNPNPDYSLNPTLKRILPSLTSHHITNLI--NL 72
Query: 67 NPYH----ALF-FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL------ 115
NP +LF FFN+ ++ P + HT Y+ + L SH+L+S SL
Sbjct: 73 NPLSLPPLSLFSFFNYLASRPP----FRHTLHNYSTMAHFLSSHNLLSQTHSLFLFIISK 128
Query: 116 -------------------KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGA 156
+ + S LI AY D ++ AI K+
Sbjct: 129 MGHHSSTSLISSLIQTVPTHHRHNHSVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSI 188
Query: 157 CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
+ + LL ++++N F+ V + PP+V + ++ G+CK+G + NA+ V
Sbjct: 189 PVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMV 248
Query: 217 FDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
FD ++ ++P+++++NT+I+G+C+ +EE + M + P+ TY+A+I GLC
Sbjct: 249 FDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCK 308
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
RV+EA L +M G N T +++ G C GK D A+ + + + PD+ +
Sbjct: 309 ESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLIT 368
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +ING C+ G EA LL EM G KP +F + ++G++D A+ + +M
Sbjct: 369 YNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMV 428
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ + V++ +I GLC GR++D E ++ M+ +GH D Y+ ++ +C++G+V
Sbjct: 429 EEGIELDDVAFTALISGLC-RDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDV 487
Query: 454 ENVMQIAHEMVTKKGRL 470
+ ++ EM + GR+
Sbjct: 488 KMGAKLLKEM-QRDGRV 503
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 153/258 (59%), Gaps = 4/258 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y++L+ L + + ++ A F ++ + +VP V T+TT+I G CK G I+ A + F
Sbjct: 296 VFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV-TFTTLIDGQCKHGKIDLALRNF 354
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
++M ++P+L+ YN +ING C+ G+L+EA+K +NEM+ G +P+++T+ ++ G C +
Sbjct: 355 EIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKD 414
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D A + +M G + + +++ GLC G+ A L++++ A PD +Y
Sbjct: 415 GDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTY 474
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+VI+ FCK G LLKEM+ G P V ++NA+ + G++ A +LL M
Sbjct: 475 TMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLN 534
Query: 395 MDCLPNFVSYNTIICGLC 412
M+ +PN +++N ++ G C
Sbjct: 535 MEVVPNDITFNILLDGHC 552
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 130/260 (50%), Gaps = 8/260 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKL----SDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+A+ + L S + A L ++ + + LI G + A+ F K
Sbjct: 299 YSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMK 358
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
L +YN+L+ L R +K A + ++++ N PD T+TT++ G CK G +
Sbjct: 359 DRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIG-NGFKPDKITFTTLMDGCCKDGDM 417
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
++A ++ D M ++ + +A+ +I+G C+ G + +A++ + +M++ G +P++ TY +
Sbjct: 418 DSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMV 477
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I C G V L+ +M+ +G V T+ +++ G C G+ A L ++ +
Sbjct: 478 IDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEV 537
Query: 328 NPDVKSYEVVINGFCKIGKS 347
P+ ++ ++++G CK G S
Sbjct: 538 VPNDITFNILLDGHCKHGSS 557
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 7/166 (4%)
Query: 106 SLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
S + I +++ +L D + LI G V+ A + +Y ++
Sbjct: 419 SALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVI 478
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TV 222
+ +K+ + ++ ++ VP V TY ++ G+CK G ++NAK + M V
Sbjct: 479 DCFCKKGDVKMGAKLLKEMQRDGRVP-GVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEV 537
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
PN + +N +++G CK G + K E +G + +Y A++
Sbjct: 538 VPNDITFNILLDGHCKHGSSVDFKIFNGE---KGLVSDYASYTALV 580
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 197/395 (49%), Gaps = 44/395 (11%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
++ +LK + + ++ L+K +G VK ++ FH K + G + SY +LL
Sbjct: 66 TVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSL-HFHD-KVVAQGFQMDQVSYATLLN 123
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
L ++ + A + +++++ P+V Y T+I G CK ++ A ++ M +
Sbjct: 124 GLCKIGETRSALKLL-RMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF 182
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN++ Y+T+I GFC G+L EA +NEM+ + PN TY ++ LC G+V EAK L
Sbjct: 183 PNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNL 242
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVG--------------------------------- 310
+A M G K NV ++ +++ G C++G
Sbjct: 243 LAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCK 302
Query: 311 --KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+ D+A+ LR V+ NM P+ +Y +I+GFCK+G+ A+ LLKEM RG V +
Sbjct: 303 SKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVT 362
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ ++ L +N LD+A L +M + PN +Y +I GLC GR ++ + L +
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKG-GRHKNAQKLFQHL 421
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G ++ Y+ ++ G C+EG ++ + + +M
Sbjct: 422 LVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKM 456
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 168/342 (49%), Gaps = 9/342 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDF----FISKLIKAYGDRGNVKAAIFWFHQAK 150
Y I D L L++ A L + F S LI + G + A ++
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI 212
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+Y+Y L+ L + +K A+ + KE V P+V +Y T++ GYC +G +
Sbjct: 213 LKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV-KPNVVSYNTLMDGYCLIGEV 271
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+NAK++F M V PN+ +YN MI+ CK ++EA + E++++ PN +TY+++
Sbjct: 272 QNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSL 331
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C GR+ A L+ +M G +V T+ S+L LC D+A + E +
Sbjct: 332 IDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P+ +Y +I+G CK G+ A L + + +G + V+++N + L + G LD A+
Sbjct: 392 QPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALA 451
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ +M + C+P+ V++ II L K + E L+ MI
Sbjct: 452 MKSKMEENGCIPDAVTFEIIIRSL-FEKDQNDKAEKLLHEMI 492
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 145/278 (52%), Gaps = 4/278 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
P + + ++ KM A +F M VK P+L N +IN FC G++ +
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +++ G +PN +T N ++ GLC+ G V ++ K+ GF+ + ++ ++L GLC
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+G+ A+ LR + + + P+V Y +I+G CK +EA L EM ARG+ P V +
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++ + G+L A LL +M + PN +Y ++ LC +G++++ ++L+ M
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALC-KEGKVKEAKNLLAVM 246
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ G + Y+ L+ GYC G V+N Q+ H MV K
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQK 284
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 170/340 (50%), Gaps = 10/340 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A D G + A F + + +YN L+ ++ A+ +I+K
Sbjct: 182 LLSALSDSGRMAEAHALFSAMTCSPD---IMTYNVLMDGYCKIGQTYEAQSLMKEILKAG 238
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P+V TY+ +I YCK+ +E A +VF M PN + +NT+I GFCK G LE+A
Sbjct: 239 Y-EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCIN-GRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
K EM GC+ +TYN +I LC G V A L K+ G + T+ S+++
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C + +A+ Y + ME P+V +Y ++I+G CK+ + EA L++M+A G P
Sbjct: 358 GFCDARRLSEAMQYF-DEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTP 416
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
TV ++ + + GEL A+L ++M C PN V +NT+I GLC A+ R D L
Sbjct: 417 TVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAE-RANDGLRL 475
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ M G D Y+CL+ G C VE+ ++ M
Sbjct: 476 LCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA 515
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 165/340 (48%), Gaps = 8/340 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV----RVNSIKLAEEFFHQI 184
L++ + G V+ A+ ++ + +YN +L L N ++ A EFF ++
Sbjct: 108 LLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEM 167
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEE 244
K + V PD+ +Y ++ G + A +F MT P+++ YN +++G+CK G+ E
Sbjct: 168 -KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYE 226
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A+ M E++ G PN TY+ +I C +V+EA + KM + N T +++
Sbjct: 227 AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIA 286
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI-GKSDEAISLLKEMRARGLK 363
G C G + A+ + + + +Y +I+ CK G A+ L ++ GL
Sbjct: 287 GFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLT 346
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
PT+ ++N++ + + L A+ +M + C PN ++Y+ +I GLC + RM++
Sbjct: 347 PTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVR-RMKEAAK 404
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ M G+ Y L+ G+C+ G +++ + +M
Sbjct: 405 TLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKM 444
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 151/308 (49%), Gaps = 45/308 (14%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y+ ++ +++ ++ A E F ++++ N VP V T+ T+I G+CK GM+E+A K+F
Sbjct: 243 VFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV-TFNTLIAGFCKAGMLEDAIKLF 301
Query: 218 DVMT---------------------------------------VKPNLLAYNTMINGFCK 238
M + P ++ YN++I GFC
Sbjct: 302 AEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCD 361
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
L EA + +EM + C PN +TY+ +I GLC R+ EA + M+ +G+ V T
Sbjct: 362 ARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVT 420
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ ++ G C G+ A+ + + A P+ + +I+G CK ++++ + LL M
Sbjct: 421 YGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMH 480
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
A G KP V ++N + L ++ A L M C PN ++N +I GLC A+ ++
Sbjct: 481 AEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA---CAPNVTTFNFLIRGLC-AQKKV 536
Query: 419 QDVEDLVD 426
++ +++D
Sbjct: 537 EEARNILD 544
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 173/388 (44%), Gaps = 57/388 (14%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N+LL LV A F +++ + P+ TY +IRG+CK G + A VF M
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLA-GLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ PN NT++ G C+ G++ A K EM P ++N ++ G + GRV
Sbjct: 60 SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLC----VVGKFDQAVGYLRNVMEANMNPDVKSY 334
+A + MR + T+ +LKGLC + +QA+ + + + + + PD++SY
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179
Query: 335 E--------------------------------VVINGFCKIGKSDEAISLLKEMRARGL 362
V+++G+CKIG++ EA SL+KE+ G
Sbjct: 180 HILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 239
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+P VF+++ + + +++ A + +M + +C+PN V++NT+I G C A G ++D
Sbjct: 240 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKA-GMLEDAI 298
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVD 482
L M + G Y+ L+ C+ K+G + + ++
Sbjct: 299 KLFAEMEKIGCKATIVTYNTLIDSLCK----------------KRGGVYTAVDLFNKLEG 342
Query: 483 ALLLMWIVTGGSWISRFVFVHQVVVIME 510
A L IVT S I F ++ M+
Sbjct: 343 AGLTPTIVTYNSLIQGFCDARRLSEAMQ 370
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 162/345 (46%), Gaps = 11/345 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+ + G + A+ F K + N+LL L + + A + F ++
Sbjct: 38 LIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGP 97
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLA---YNTMINGFC----KKGE 241
+P S + ++RG+ G + +A M + +A YN ++ G C
Sbjct: 98 FLPTSAS-HNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANR 156
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
LE+A + EM G P+ +Y+ ++ L +GR+ EA L + M + ++ T+
Sbjct: 157 LEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNV 213
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C +G+ +A ++ +++A P+V +Y ++IN +CK+ K +EA + +M
Sbjct: 214 LMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESN 273
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P +FN + + G L+ AI L +M ++ C V+YNT+I LC +G +
Sbjct: 274 CVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTA 333
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
DL +++ +G Y+ L++G+C+ + MQ EM K
Sbjct: 334 VDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK 378
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 128/260 (49%), Gaps = 7/260 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV-NSIKLAEEFFHQIVKE 187
LI + G ++ AI F + ++I A + +YN+L+ L + + A + F+++
Sbjct: 284 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 343
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFCKKGELEEA 245
+ P V TY ++I+G+C + A + FD M K PN++ Y+ +I+G CK ++EA
Sbjct: 344 GLTPTIV-TYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKVRRMKEA 402
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + +M G P +TY +I G C G + A + KM+L G N +++ G
Sbjct: 403 AKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDG 462
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + + + L ++ PDV +Y +I+G C + ++A L M P
Sbjct: 463 LCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPN 519
Query: 366 VFSFNAVFRILVENGELDRA 385
V +FN + R L +++ A
Sbjct: 520 VTTFNFLIRGLCAQKKVEEA 539
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 199/395 (50%), Gaps = 44/395 (11%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
S+ A +LK ++ LIK +G VK A+ FH K + G L SY +L+
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKAL-HFHD-KLLAQGFQLNQVSYATLIN 172
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
+ ++ + A + +I + P+V Y+T+I CK ++ A +F MTVK
Sbjct: 173 GVCKIGDTRGAIKLLRKI-DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 231
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
+++ Y+T+I GFC +G+L+EA +NEM+ + PN TYN ++ LC G+V EAK +
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+A M K +V T+ +++ G +V + +A + + PDV +Y ++INGFCK
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 351
Query: 344 IGKSDEAISLLKEM-----------------------------------RARGLKPTVFS 368
DEA++L KEM R RG V +
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVIT 411
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++++ L +NG LDRAI L +M + PN ++ ++ GLC GR++D +++ +
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG-GRLKDAQEVFQDL 470
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G++L+ Y+ ++ G+C++G +E + + +M
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKM 505
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 177/347 (51%), Gaps = 13/347 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLKN------SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQ 148
Y+ I D L + L+S A L S + + S LI + G +K AI ++
Sbjct: 202 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTY--STLIYGFCIEGKLKEAIGLLNE 259
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
+Y+YN L+ L + +K A+ ++K V PDV TY+T++ GY +
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA-CVKPDVITYSTLMDGYFLVY 318
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
++ A+ VF+ M+ V P++ Y +INGFCK ++EA EM + P +TY+
Sbjct: 319 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
++I GLC +GR+ L+ +MR G +V T+ S++ GLC G D+A+ + +
Sbjct: 379 SLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ P++ ++ ++++G CK G+ +A + +++ +G V+++N + + G L+ A
Sbjct: 439 EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEA 498
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ +L +M C+PN ++ TII L K E L+ +MI G
Sbjct: 499 LTMLSKMEDNGCIPNAFTFETIIIAL-FKKDENDKAEKLLRQMIARG 544
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 190/405 (46%), Gaps = 75/405 (18%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
NV A+ F++ + + + +N +L ++ A H++ + + PD+ T
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGI-QPDLITL 97
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+I +C MG I V + + P+ + NT+I G C KG++++A ++++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 255 RGCRPNELTYNAMIYGLC--------------INGR---------------------VDE 279
+G + N+++Y +I G+C I+GR V E
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L ++M + G +V T+ +++ G C+ GK +A+G L ++ +NP+V +Y ++++
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFS--------------------FNAV------- 372
CK GK EA S+L M +KP V + FNA+
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337
Query: 373 ----FRILV----ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ IL+ +N +D A+ L K+M Q + +P V+Y+++I GLC + GR+ V DL
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS-GRIPYVWDL 396
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+D M G D YS L+ G C+ G+++ + + ++M ++ R
Sbjct: 397 IDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIR 441
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 139/286 (48%), Gaps = 13/286 (4%)
Query: 84 NPNKYHHTTPCYTAITDVLLSHSLI----SIAASLLKNSNKLSDFFISKLIKAYGDRGNV 139
NPN Y Y + D L + S+ A +LK K S L+ Y V
Sbjct: 266 NPNVY-----TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320
Query: 140 KAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTT 199
K A F+ + +++Y L+ + + A F ++ ++N+VP + TY++
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP-GIVTYSS 379
Query: 200 MIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
+I G CK G I + D M + +++ Y+++I+G CK G L+ A N+M ++
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
RPN T+ ++ GLC GR+ +A+ + + G+ NV T+ M+ G C G ++A+
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
L + + P+ ++E +I K ++D+A LL++M ARGL
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 197/396 (49%), Gaps = 39/396 (9%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ L + ++ A + VP +V TY+ +I G CK+G I+ A+++
Sbjct: 74 TYNTLIDSLCKAGDLEEARRLHGDMSSRGCVP-NVVTYSVLINGLCKVGRIDEARELIQE 132
Query: 220 MTVK-----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR--PNELTYNAMIYGLC 272
MT K PN++ YN+ ++G CK+ EA + M + + R P+ +T++ +I GLC
Sbjct: 133 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 192
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G++DEA + M G+ NV T+ +++ GLC K ++A + ++++ + PDV
Sbjct: 193 KCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 252
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF-----SFNAVFRILVENGELDRAIL 387
+Y V+++ FCK + DEA+ LL M +RG P V +FN + + G ++A
Sbjct: 253 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASA 312
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L ++M + P+ +++ +I GLC A G+++ D++D M G + Y+ L+ G
Sbjct: 313 LFEEMVAKNLQPDVMTFGALIDGLCKA-GQVEAARDILDLMGNLGVPPNVVTYNALVHGL 371
Query: 448 CEEGNVENVMQIAHEMVTKK--------GRLLKLKNFLTRVVDALLLM-------W---- 488
C+ G +E Q EMV+ G L+ +R DAL L+ W
Sbjct: 372 CKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDT 431
Query: 489 ----IVTGGSWISRFVFVHQVVVIMERTVEDGKRSE 520
I+ G W S Q + ++E V G + +
Sbjct: 432 VTYNILVDGLWKSG--KTEQAITVLEEMVGKGHQPD 465
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 169/318 (53%), Gaps = 13/318 (4%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN +L L R A E F + + V P + TY T+I G CK + ++F+ +
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ YNT+I+ CK G+LEEA++ +M +RGC PN +TY+ +I GLC GR+
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 278 DEAKMLMAKMRLNGFK--DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM--NPDVKS 333
DEA+ L+ +M N+ T+ S L GLC +A +R++ + ++ +PD +
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+ +I+G CK G+ DEA S+ +M A G P V ++NA+ L + +++RA +++ M
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN-----LDFTMYSCLLKGYC 448
P+ ++Y+ ++ C A R+ + +L+ M G D ++ L+ G C
Sbjct: 244 DKGVTPDVITYSVLVDAFCKAS-RVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGAC 302
Query: 449 EEGNVENVMQIAHEMVTK 466
+ GN E + EMV K
Sbjct: 303 KAGNFEQASALFEEMVAK 320
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 154/273 (56%), Gaps = 8/273 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKE----NVVPPDVSTYTTMIRGYCKMGMIENAKK 215
+Y+ L+ + + + A E H + NV+ PD T+ +I G CK G E A
Sbjct: 253 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASA 312
Query: 216 VFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+F+ M K P+++ + +I+G CK G++E A+ ++ M N G PN +TYNA+++GLC
Sbjct: 313 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 372
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+GR++EA + +M +G + T+ S++ LC + D A+ + + +PD
Sbjct: 373 KSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV 432
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y ++++G K GK+++AI++L+EM +G +P F+F A F L +G L + LL+ +
Sbjct: 433 TYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVV 492
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
LP+ + ++I+ +C + G++ DV+ ++
Sbjct: 493 LAKGMLPDATTCSSILDWVCRS-GKLDDVKAMI 524
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 146/281 (51%), Gaps = 9/281 (3%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM----TVKPNLLAYNTMINGFCKKGELEEAKKCM 249
V+ Y +++ C+ G A ++F V P ++ YNT+ING CK +L +
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
E++ RG P+ +TYN +I LC G ++EA+ L M G NV T+ ++ GLC V
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 310 GKFDQAVGYLRNVMEANMN--PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK--PT 365
G+ D+A ++ + + + P++ +Y ++G CK + EA L++ +R L+ P
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+F+ + L + G++D A + M +PN ++YN ++ GLC A +M+ ++
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD-KMERAHAMI 239
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M+ G D YS L+ +C+ V+ +++ H M ++
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR 280
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 160/357 (44%), Gaps = 46/357 (12%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKV 216
+ +YNS L L + + A E + ++ V PD T++T+I G CK G I+ A V
Sbjct: 144 IITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSV 203
Query: 217 FDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
FD M PN++ YN ++NG CK ++E A + M+++G P+ +TY+ ++ C
Sbjct: 204 FDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 263
Query: 274 NGRVDEAKMLMAKMRLNGFKDNV-----STHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
RVDEA L+ M G NV T ++ G C G F+QA ++ N+
Sbjct: 264 ASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 323
Query: 329 PDVKS-----------------------------------YEVVINGFCKIGKSDEAISL 353
PDV + Y +++G CK G+ +EA
Sbjct: 324 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 383
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
L+EM + G P ++ ++ L D A+ L+ ++ P+ V+YN ++ GL
Sbjct: 384 LEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL-W 442
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
G+ + +++ M+ GH D ++ G GN+ M++ +V KG L
Sbjct: 443 KSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLR-VVLAKGML 498
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 132/235 (56%), Gaps = 4/235 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ + + + A F ++V +N+ PDV T+ +I G CK G +E A+ + D+
Sbjct: 293 TFNILIAGACKAGNFEQASALFEEMVAKNL-QPDVMTFGALIDGLCKAGQVEAARDILDL 351
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V PN++ YN +++G CK G +EEA + + EM++ GC P+ +TY +++Y LC R
Sbjct: 352 MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASR 411
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D+A L+++++ G+ + T+ ++ GL GK +QA+ L ++ PD ++
Sbjct: 412 TDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 471
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+G + G + LL+ + A+G+ P + +++ + +G+LD ++K+
Sbjct: 472 CFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 164/303 (54%), Gaps = 5/303 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN+L+ L A ++++ VP DV TYT ++ CK + A K+ D
Sbjct: 33 YTYNTLIRGLCGRGRTANALAVLDEMLRRRCVP-DVVTYTILLEATCKRSGYKQAMKLLD 91
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P+++ YN ++NG C++G +++A + + + + GC PN ++YN ++ GLC
Sbjct: 92 EMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAE 151
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R ++A+ LM +M G NV T ++ LC G + A+ L + + P+ SY
Sbjct: 152 RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 211
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++ FCK K D+A++ L M +RG P + S+N + L +GE+D A+ LL Q+
Sbjct: 212 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 271
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C P +SYNT+I GL A G+ ++ +L++ M+ G D YS + G C E +E+
Sbjct: 272 GCAPVLISYNTVIDGLTKA-GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIED 330
Query: 456 VMQ 458
++
Sbjct: 331 AIR 333
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 142/271 (52%), Gaps = 1/271 (0%)
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
Y M+ GYC G ++ A+++ M V+P+ YNT+I G C +G A ++EM+ R
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR 61
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
C P+ +TY ++ C +A L+ +MR G ++ T+ ++ G+C G+ D A
Sbjct: 62 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 121
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ +L+N+ P+ SY +V+ G C + ++A L+ EM +G P V +FN +
Sbjct: 122 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 181
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L G ++ A+ +L+Q+P+ C PN +SYN ++ C K +M +D M+ G
Sbjct: 182 LCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQK-KMDKAMAFLDLMVSRGCYP 240
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ LL C G V+ +++ H++ K
Sbjct: 241 DIVSYNTLLTALCRSGEVDVAVELLHQLKDK 271
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 174/356 (48%), Gaps = 5/356 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L++A R K A+ + + + +YN ++ + + + A EF +
Sbjct: 73 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 132
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P VS Y +++G C E+A+++ M K PN++ +N +I+ C+KG +E A
Sbjct: 133 CEPNTVS-YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 191
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + ++ GC PN L+YN +++ C ++D+A + M G ++ ++ ++L
Sbjct: 192 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 251
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ D AV L + + P + SY VI+G K GK+ EA+ LL EM ++GL+P
Sbjct: 252 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 311
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +++ + L ++ AI ++ M PN V YN II GLC + DL
Sbjct: 312 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRR-ETHSAIDLF 370
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVV 481
MI +G + + Y+ L++G EG ++ + E+ ++ G + L L V
Sbjct: 371 AYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLIDVA 426
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 188/372 (50%), Gaps = 18/372 (4%)
Query: 102 LLSHSLISIAASLLKNSNKLSD----FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC 157
L++ ++ AA L++ S + + +KLI+ RG A A+
Sbjct: 45 LIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVD 104
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN+L+ R + A +++ VPPD TYT +IRG C G + +A +
Sbjct: 105 VFAYNTLVAGYCRYGRLDAA----RRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLL 160
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +P+++ Y ++ CK +A K ++EM +GC PN +TYN +I G+C
Sbjct: 161 DDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCRE 220
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
RVD+A+ ++ ++ GF+ + ++ ++LKGLC +++ ++E N P+ ++
Sbjct: 221 DRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTF 280
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++ FC+ G + AI +L M G N V + + G +D A L M
Sbjct: 281 DMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGS 340
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG---HNLDFTMYSCLLKGYCEEG 451
C P+ +SY T++ GLC A GR +D ++L++ M+R + + F + C+L C++G
Sbjct: 341 YGCSPDTISYTTVLKGLCRA-GRWEDAKELLNEMVRKNCPPNEVTFNTFICIL---CQKG 396
Query: 452 NVENVMQIAHEM 463
++ + + +M
Sbjct: 397 LIDQAILLIEQM 408
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 182/376 (48%), Gaps = 37/376 (9%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + LI+ DRG V A+ + E + +Y LL + + + A + +
Sbjct: 138 YTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDE 197
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ + P ++ TY +I G C+ +++A+++ + ++ +P+ ++Y T++ G C
Sbjct: 198 MRAKGCTP-NIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAK 256
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
E+ + EM+ C PNE+T++ ++ C G V+ A ++ +M +G N +
Sbjct: 257 RWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCN 316
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ +C G+ D A +L N+ +PD SY V+ G C+ G+ ++A LL EM +
Sbjct: 317 IVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRK 376
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ-------------------------- 394
P +FN IL + G +D+AILL++QMP+
Sbjct: 377 NCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSA 436
Query: 395 ------MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+ C PN ++Y T++ GLC A+ R+ +L+ M+++ L+ ++ L+ +C
Sbjct: 437 LELFNSLPCEPNTITYTTLLTGLCHAE-RLDAAAELLAEMMQNDCPLNVVTFNVLVSFFC 495
Query: 449 EEGNVENVMQIAHEMV 464
++G VE +++ +M+
Sbjct: 496 QKGFVEEAIELVQQMM 511
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 139/277 (50%), Gaps = 1/277 (0%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
P DV Y T++ GYC+ G ++ A+++ M V P+ Y +I G C +G + +A +
Sbjct: 101 APVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLL 160
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++M+ R C+P+ +TY ++ +C + +A ++ +MR G N+ T+ ++ G+C
Sbjct: 161 DDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCRE 220
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ D A L + PD SY V+ G C + ++ L EM P +F
Sbjct: 221 DRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTF 280
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ + R G ++RAI +L +M + C N N +I +C +GR+ D + ++ M
Sbjct: 281 DMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSIC-KQGRVDDAFEFLNNMG 339
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G + D Y+ +LKG C G E+ ++ +EMV K
Sbjct: 340 SYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRK 376
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 134/286 (46%), Gaps = 34/286 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS------------------------ 195
SY ++L L R + A+E +++V++N P +V+
Sbjct: 349 SYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQM 408
Query: 196 ----------TYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEA 245
TY ++ G+C G +++A ++F+ + +PN + Y T++ G C L+ A
Sbjct: 409 PEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDAA 468
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + EMM C N +T+N ++ C G V+EA L+ +M +G N+ T ++L G
Sbjct: 469 AELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDG 528
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+ ++A+ L ++ ++ D +Y +++ + + +EA+ + ++ G++P
Sbjct: 529 ITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPK 588
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+N + L + E DRAI M C+PN +Y +I GL
Sbjct: 589 AVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGL 634
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ +L EA + + +RG P+ +I LC GR +A ++ +G +V
Sbjct: 48 RDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFA 107
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ G C G+ D A R + + PD +Y +I G C G+ +A+SLL +M
Sbjct: 108 YNTLVAGYCRYGRLDAA---RRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDML 164
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
R +P+V ++ + + ++ +A+ +L +M C PN V+YN II G+C + R+
Sbjct: 165 RRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCR-EDRV 223
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D +++R+ G D Y+ +LKG C E+V + EMV
Sbjct: 224 DDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMV 269
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 120/237 (50%), Gaps = 7/237 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + +G V +A+ F+ N +Y +LL L + A E +++ +N
Sbjct: 423 LVNGFCVQGRVDSALELFNSLPCEPN---TITYTTLLTGLCHAERLDAAAELLAEMM-QN 478
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P +V T+ ++ +C+ G +E A ++ M PNL+ +NT+++G + EEA
Sbjct: 479 DCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEA 538
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ ++++G + +TY++++ L R++EA + ++ G + + +L
Sbjct: 539 LELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSA 598
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
LC + D+A+ + +++ + P+ +Y ++I G + G EA +L E+ +RG+
Sbjct: 599 LCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 1/121 (0%)
Query: 97 AITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGA 156
IT+ S + + L+ L S ++ ++ A+ FH + +
Sbjct: 528 GITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRP 587
Query: 157 CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
YN +L L + A +FF +V N P+ STY +I G + G+++ A+ V
Sbjct: 588 KAVMYNKILSALCKRCETDRAIDFFAHMVS-NSCMPNESTYVILIEGLAREGLLKEARYV 646
Query: 217 F 217
Sbjct: 647 L 647
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 206/415 (49%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y + L +H + S A SLL+
Sbjct: 3 FFTWLSSPANST--FRHTLHSYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P+ ++
Sbjct: 121 KYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G L+E + + M+ G +P+ TY+ +I GL ++D+A L +M
Sbjct: 180 YNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ +M +GLKP ++ + + G+LD A K+M Q + + V Y +I
Sbjct: 300 QAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G N D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLCQ-EGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEM 413
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 174/320 (54%), Gaps = 7/320 (2%)
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+F Q++ + + S+N+++ + R + AE H+ + E V PDV TY +I+
Sbjct: 138 VFDEMQSRGVRR--TVVSFNTMISGMCRAGDLDGAETL-HRRMSEAGVTPDVYTYGALIQ 194
Query: 203 GYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
G C++G IE+A+ VF+ M +KPN + + +I+ CKKG+ E + EM RG RP
Sbjct: 195 GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRP 254
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TYNA++ GLC + A ++ +MR G + + T+ +++ G C + D A+
Sbjct: 255 DAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIK 314
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+N++ + D +Y +I+G K G+S +A +L EM GL+P ++ V
Sbjct: 315 QNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRK 374
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
G++ + LLK+M P V+YN I+ G C G+M++ + L++ MI G + D
Sbjct: 375 GDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKL-GQMKNADMLLNAMINIGVSPDDIT 433
Query: 440 YSCLLKGYCEEGNVENVMQI 459
Y+ LL G+C+ G V ++ ++
Sbjct: 434 YNILLDGHCKHGKVTDIEEL 453
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 159/311 (51%), Gaps = 6/311 (1%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
S G++ R + A F+ Q++ + PP+ + ++R ++G + +A+ VFD M
Sbjct: 85 TSCTGLMSRFPTAPEACAFYLQLLDAGL-PPEAKLFNVLMRDLVRLGELASAQNVFDEMQ 143
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
V+ ++++NTMI+G C+ G+L+ A+ M G P+ TY A+I GLC GR++
Sbjct: 144 SRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIE 203
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A+ + KM G K N ++ C G + + R + E + PD +Y ++
Sbjct: 204 DARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIV 263
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG C+ A ++ EMR+ GL+P ++ + + ELD A+ + + M
Sbjct: 264 NGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVG 323
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
+ V+Y +I GL A GR D E ++ M+ +G D T Y+ ++ +C +G+V+ ++
Sbjct: 324 LDEVTYTALISGLSKA-GRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLR 382
Query: 459 IAHEMVTKKGR 469
+ EM KGR
Sbjct: 383 LLKEM-QNKGR 392
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I A+ +G+VK + + + + +YN ++ ++ +K A+ + ++
Sbjct: 367 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 426
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKK 239
V P D+ TY ++ G+CK G + + +++ P+L Y +++ KK
Sbjct: 427 VSPDDI-TYNILLDGHCKHGKVTDIEELKSAKGTVPDLGVYTSIVGEIVKK 476
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 209/415 (50%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL--------KNS------- 118
FF W S P + + HT Y + L +H ++ A +L+ KNS
Sbjct: 1 FFTWLSFPTNST--FRHTLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAA 58
Query: 119 ------NKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 59 ILETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL 118
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A VFD +T ++P++++
Sbjct: 119 KYFKLVWXFYKEIL-ECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVS 177
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
+NT++NG+ + G+L+E + + M G +P+ TY+ +I GLC ++D+A L +M
Sbjct: 178 FNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 237
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G N T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G
Sbjct: 238 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 297
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EMR +GLKP S+ + + G+L+ A K+M Q + + V+Y +I
Sbjct: 298 QAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALI 357
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 358 SGLC-QEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEM 411
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 162/291 (55%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A+ F + + S+N+L+ +R+ L E F
Sbjct: 141 YFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGD--LDEGFRLK 198
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK +++A ++FD M K PN + + T+I+G CK
Sbjct: 199 SAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKN 258
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + +A+ L+ +MR+ G K + ++
Sbjct: 259 GRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISY 318
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G + A + + +++ N+ D +Y +I+G C+ G+S +A +L+EM +
Sbjct: 319 TTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLS 378
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GL+P ++ + + G++ LLK+M + +P+ V+YN ++ G
Sbjct: 379 VGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 178/339 (52%), Gaps = 28/339 (8%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI ++ G ++ A WF + + I A + +Y +LL ++ + A + F++++
Sbjct: 329 LIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAG 388
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM-------------------TVKPNLLAY 229
PP+ TY+ ++ G CK G I+ A +V+ + ++ PN++ Y
Sbjct: 389 C-PPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTY 447
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+I+G CK ++ +A++ ++ M++ GC PN + Y+A+I G C G++D A+ + +M
Sbjct: 448 GALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSK 507
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G+ V T+ S++ + + D A+ L ++E++ P+V +Y +I+G C+IG+ +
Sbjct: 508 CGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQK 567
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A+ LL M +G P V ++ A+ L ++G++D ++ L QM C PN+V+Y +I
Sbjct: 568 ALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLI- 626
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
C A G + + L+ M + T + L+GYC
Sbjct: 627 NHCCAAGLLDEAHSLLSEMKQ-------TYWPKYLQGYC 658
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 159/313 (50%), Gaps = 18/313 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++L+ +V I A+E F ++ K +P V TYT++I K ++ A KV M
Sbjct: 482 YDALIDGFCKVGKIDNAQEVFLRMSKCGYLPT-VHTYTSLIDAMFKDRRLDLAMKVLSQM 540
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN++ Y MI+G C+ GE ++A K ++ M +GC PN +TY A+I GL +G+V
Sbjct: 541 VESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKV 600
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D + L +M G N T++ ++ C G D+A L + + ++ Y V
Sbjct: 601 DLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSV 660
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMP 393
+ GF K K ++ LL+E+ + G P V+ +L++N G L+ A+ L K+M
Sbjct: 661 VQGFSK--KFIASLGLLEELESHGTVPIA----PVYGLLIDNFSKAGRLEEALELHKEMM 714
Query: 394 QMDCLPNFVS---YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
++ N S Y ++I LC+A +++ +L + R G + +++ CL+KG +
Sbjct: 715 ELSSSLNITSKDMYTSLIQALCLAS-QLEKAFELYSEITRKGVVPELSVFVCLIKGLIKV 773
Query: 451 GNVENVMQIAHEM 463
+Q+ + +
Sbjct: 774 NKWNEALQLCYSI 786
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 177/426 (41%), Gaps = 64/426 (15%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
KL +++I + AI + H+ + + +Y +LL ++ + +
Sbjct: 104 KLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKR 163
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
+ ++KE P+ S + +++ YC A K+ M P +AYN I
Sbjct: 164 IINMMMKEGC-NPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSI 222
Query: 237 CKKGELEE------AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
C EL A+K EM+ C N++ LC G+ D A ++ M
Sbjct: 223 CGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGK 282
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
GF + ST+ ++ LC K ++A + + +NPDV +Y ++I+ FCK G ++A
Sbjct: 283 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQA 342
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
S EMR+ G V ++ A+ ++ +L +A + +M C PN ++Y+ ++ G
Sbjct: 343 RSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDG 402
Query: 411 LCMAKGRMQ--------------------------------------------------- 419
LC A G +Q
Sbjct: 403 LCKA-GEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVV 461
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTR 479
D ++L+D M+ +G + +Y L+ G+C+ G ++N ++ M +K G L + + T
Sbjct: 462 DAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRM-SKCGYLPTVHTY-TS 519
Query: 480 VVDALL 485
++DA+
Sbjct: 520 LIDAMF 525
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 128/346 (36%), Gaps = 43/346 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ VL + + + + E+ D T + CK G +A + +
Sbjct: 42 TYNALVQVLATAGQMDMGFRV-QKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVMIER 100
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
K + + MI+G + +EA ++ M C PN +TY ++ G ++
Sbjct: 101 EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGW 160
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
K ++ M G N S S++ C + A L+ + + P +Y + I
Sbjct: 161 CKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIG 220
Query: 340 G-----------------------------------------FCKIGKSDEAISLLKEMR 358
C +GK D A ++K M
Sbjct: 221 SICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMM 280
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+G P +++ V L E ++++A LL ++M + P+ +Y +I C A G +
Sbjct: 281 GKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKA-GLI 339
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ D M G + + Y+ LL Y + + I + M+
Sbjct: 340 EQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMI 385
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 101/249 (40%), Gaps = 8/249 (3%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P+ YN ++ G+++ + EM G ++ T LC GR +A +
Sbjct: 37 RPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALV 96
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
++ + FK + M+ GL FD+A+ +L + + P+V +Y ++ GF
Sbjct: 97 MIER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFL 153
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K + ++ M G P FN++ + A LLK+M C P +V
Sbjct: 154 KKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYV 213
Query: 403 SYNTIICGLCMAK-----GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+YN I +C + + E + + M+ S L+ + + C G +
Sbjct: 214 AYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAF 273
Query: 458 QIAHEMVTK 466
QI M+ K
Sbjct: 274 QIIKVMMGK 282
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 13/210 (6%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI G G V ++ F Q +Y L+ + A ++ K
Sbjct: 588 TALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM-K 646
Query: 187 ENVVPPDVSTYTTMIRGYCK-----MGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGE 241
+ P + Y ++++G+ K +G++E + V P Y +I+ F K G
Sbjct: 647 QTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTV----PIAPVYGLLIDNFSKAGR 702
Query: 242 LEEAKKCMNEMMNRGCRPNELT---YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
LEEA + EMM N + Y ++I LC+ ++++A L +++ G +S
Sbjct: 703 LEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSV 762
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
++KGL V K+++A+ ++ + +N
Sbjct: 763 FVCLIKGLIKVNKWNEALQLCYSICDEGVN 792
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 177/323 (54%), Gaps = 8/323 (2%)
Query: 150 KQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
++IE C + YN+++ L + ++ A + + ++ ++ V P +V TYT++I G+C
Sbjct: 178 RKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFP-NVVTYTSLIYGFCI 236
Query: 207 MGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+G ++ A + + M +K PN+ +NT+++G CK+G++ EAK + MM G P+ T
Sbjct: 237 VGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFT 296
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YNA++ G + +AK + M G +V ++ M+ GL + D+A+ +
Sbjct: 297 YNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMR 356
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
N+ PDV +Y +I+G CK G+ + A+ + EM RG P V ++ ++ L ++ ++D
Sbjct: 357 NENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVD 416
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+AI LLK++ N +YN ++ GLC GR+ D + + ++ GHN+D YS +
Sbjct: 417 KAIALLKKIKDQGIQANMYTYNILVDGLC-KDGRLTDAQKVFQDLLMKGHNVDVVTYSIM 475
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+ G C+E + + + +M K
Sbjct: 476 INGLCKESLFDEALTLLSKMEDK 498
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 169/328 (51%), Gaps = 7/328 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+ N L+ + I A F +I+K PD+ TYTT+IRG C G ++ + D
Sbjct: 86 TLNILINSYCHLRQINSAFSVFAKILKLGY-QPDIITYTTLIRGLCLNGQVKESLNFHDR 144
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ +K + ++Y T+ING CK G+ A + + ++ CRP+ + YN +I GLC +
Sbjct: 145 LVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKL 204
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V +A L +M NV T+ S++ G C+VG+ D+A G L ++ N+NP+V ++
Sbjct: 205 VRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNT 264
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G CK GK EA SL+ M G+ P VF++NA+ E +A + M QM
Sbjct: 265 LVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMG 324
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+ SY+ +I GL K + + DL + M D YS L+ G C+ G + +
Sbjct: 325 VTCDVHSYSVMISGLSKMK-MLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSA 383
Query: 457 MQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
++ EM +G+ + + T ++DAL
Sbjct: 384 LKYVDEM-HDRGQPPNVITY-TSLIDAL 409
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 141/247 (57%), Gaps = 6/247 (2%)
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
G +++YN+L+ V A+ F+ I+ + V DV +Y+ MI G KM M++ A
Sbjct: 291 GPDVFTYNALMDGYFLVKEAGKAKNVFN-IMAQMGVTCDVHSYSVMISGLSKMKMLDEAM 349
Query: 215 KVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+F+ M V P+++AY+++I+G CK G + A K ++EM +RG PN +TY ++I L
Sbjct: 350 DLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDAL 409
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C + +VD+A L+ K++ G + N+ T+ ++ GLC G+ A ++++ N DV
Sbjct: 410 CKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDV 469
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y ++ING CK DEA++LL +M +G P ++ + E D+A LL++
Sbjct: 470 VTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLRE 529
Query: 392 MPQMDCL 398
M +DC+
Sbjct: 530 M--IDCV 534
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 129/245 (52%), Gaps = 4/245 (1%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ N + N +IN +C ++ A +++ G +P+ +TY +I GLC+NG+V E+
Sbjct: 80 IQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESL 139
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
++ G K + ++ +++ GLC +G+ A+ LR + PDV Y +I+G
Sbjct: 140 NFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGL 199
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK +A L EM + + P V ++ ++ G+LD+A LL +M + PN
Sbjct: 200 CKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNV 259
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC---EEGNVENVMQ 458
++NT++ GLC +G+M++ + LV M++ G D Y+ L+ GY E G +NV
Sbjct: 260 CTFNTLVDGLC-KEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFN 318
Query: 459 IAHEM 463
I +M
Sbjct: 319 IMAQM 323
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 145/274 (52%), Gaps = 9/274 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+L+ L + ++ A+ ++KE V PDV TY ++ GY + AK VF++
Sbjct: 261 TFNTLVDGLCKEGKMREAKSLVAVMMKEGV-GPDVFTYNALMDGYFLVKEAGKAKNVFNI 319
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V ++ +Y+ MI+G K L+EA M N P+ + Y+++I GLC +GR
Sbjct: 320 MAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGR 379
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ A + +M G NV T+ S++ LC + D+A+ L+ + + + ++ +Y +
Sbjct: 380 INSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNI 439
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G CK G+ +A + +++ +G V +++ + L + D A+ LL +M
Sbjct: 440 LVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKG 499
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
C+P+ ++Y TII +D+ D ++++R
Sbjct: 500 CVPDAIAYETIINAF-----FEKDMNDKAEKLLR 528
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/152 (17%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
+ A+ ++ P + + ++ K I L + M G++ + N
Sbjct: 30 LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ +++ A + ++ ++ P+ ++Y T+I GLC+ G++++ + DR++
Sbjct: 90 LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCL-NGQVKESLNFHDRLVSQ 148
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G LD Y L+ G C+ G +++ ++
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKI 180
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 183/370 (49%), Gaps = 34/370 (9%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + L+ + G ++ A WF + +Q + +Y +L+ ++ + A E F
Sbjct: 158 YTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEM 217
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF--------------------DVMTVK 223
++ VP ++ TYT +I G+CK G E A +++ D +
Sbjct: 218 MLSNGCVP-NIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKE 276
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN++ Y +++G CK +++EA+ + M GC PN++ Y+A+I G C G++DEA+ +
Sbjct: 277 PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV 336
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
KM +G NV T+ S++ L + D A+ L ++E + P+V Y +++G CK
Sbjct: 337 FTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCK 396
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+GK+DEA L+ M +G P V ++ A+ + G +DR + LL+ M C PNF++
Sbjct: 397 VGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFIT 456
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y +I C A G + D L++ M ++ MY +++G+ +HE
Sbjct: 457 YRVLI-NHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF------------SHEF 503
Query: 464 VTKKGRLLKL 473
V G L +L
Sbjct: 504 VASLGLLAEL 513
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 155/337 (45%), Gaps = 39/337 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ L + + +K A + + E P + Y +I G+CK+G ++ A++VF
Sbjct: 281 TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQI-IYDALIDGFCKVGKLDEAQEVFTK 339
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M PN+ Y+++I+ K L+ A K + +M+ C PN + Y M+ GLC G+
Sbjct: 340 MLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGK 399
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
DEA LM M G NV T+ +M+ G G+ D+ + L+ + P+ +Y V
Sbjct: 400 TDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRV 459
Query: 337 VINGFCKIGKSDEAISLLKEMRAR------GLKPTV---FSFN----------------- 370
+IN C G D+A LL+EM+ G+ V FS
Sbjct: 460 LINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSV 519
Query: 371 ---AVFRILVEN----GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
V+++L++N G L+ A+ L +++ +Y ++I L +A ++
Sbjct: 520 PILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN-TYVSLIESLTLA-CKVDKAFK 577
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
L M R G + +M CL+KG G E +Q++
Sbjct: 578 LYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLS 614
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEE---- 244
P + +++ YC+ G A K+ M + +P + YN +I G C +L
Sbjct: 9 PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVI 68
Query: 245 --AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
A++ NEM+ G N++ LC G+ ++A ++ +M GF + ST+ +
Sbjct: 69 GLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKV 128
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ LC K ++A + + + PDV +Y +++ FCK+G ++A + EM+ G
Sbjct: 129 IGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGC 188
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P V ++ A+ ++ +L RA + + M C+PN V+Y +I G C A G +
Sbjct: 189 APNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA-GETEKAC 247
Query: 423 DLVDRM 428
+ RM
Sbjct: 248 QIYARM 253
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 40/276 (14%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y+SL+ L + + LA + +++ EN P+V YT M+ G CK+G + A ++
Sbjct: 349 VYTYSSLIDKLFKDKRLDLALKVLTKML-ENSCAPNVVIYTEMVDGLCKVGKTDEAYRLM 407
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+M K PN++ Y MI+GF K G ++ + + M ++GC PN +TY +I C
Sbjct: 408 LMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAA 467
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D+A L+ +M+ + ++ ++ +++G +F ++G L + E P + Y
Sbjct: 468 GLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSVPILPVY 525
Query: 335 EVVINGFCKIG----------------------------------KSDEAISLLKEMRAR 360
+++I+ F K G K D+A L +M R
Sbjct: 526 KLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRR 585
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
G P + + + L+ G+ + A+ L + QMD
Sbjct: 586 GFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMD 621
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 195/387 (50%), Gaps = 18/387 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKL----SDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y A+ + + + A SL N +D S LI ++ RG + A+ + +
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
++ A +Y Y+SL+ ++ ++ A+ F +++ N + P+V YT++I GYCK G +
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA-NGLKPNVVIYTSLISGYCKEGEL 476
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
NA +++ MT + PN + +I+G C + EA K EM+ PNE+TYN +
Sbjct: 477 HNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL 536
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM--EA 325
I G C G A L+ +M G + T++ ++ GLC G+ +A ++ ++ +
Sbjct: 537 IEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQ 596
Query: 326 NMN------PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+N P+V +Y +ING CKIG D+A L +EM A P ++ L
Sbjct: 597 KLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSE 656
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
G +++AI L + + L N V+YN +I G C GR+Q+ +++ MI SG + D
Sbjct: 657 GNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKL-GRIQEAAEVLVNMIDSGISPDCIS 714
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTK 466
YS ++ YC G+++ +++ M+ +
Sbjct: 715 YSTIIYEYCRRGDLKEAIKLWESMLNR 741
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 166/328 (50%), Gaps = 11/328 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ L +V + EE +++++ VP + + + ++ G K G I +A FD+
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAV-SNLVDGLRKKGNIGSA---FDL 342
Query: 220 MT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
+ V P+L YN +IN CK G+L+EA+ N M ++G PN++TY+ +I C
Sbjct: 343 VNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCK 402
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G++D A + KM G K V + S++ G C +GK A ++ + P+V
Sbjct: 403 RGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVI 462
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I+G+CK G+ A L EM +G+ P ++F A+ L + A L +M
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ + +PN V+YN +I G C +G +L+D M+ G D Y L+ G C G V
Sbjct: 523 EWNVIPNEVTYNVLIEGHC-KEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRV 581
Query: 454 ENVMQIAHEMVTKKGRLLKLKNFLTRVV 481
+ +++ ++ +L +++ L VV
Sbjct: 582 SEAREFMNDLQGEQQKLNEIEGCLPNVV 609
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 171/351 (48%), Gaps = 14/351 (3%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
S+ ++ N K + + LI Y G + A +H+ Y++ +L+ L
Sbjct: 446 SLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PN 225
N + A + F ++V+ NV+P +V TY +I G+CK G A ++ D M K P+
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEV-TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPD 564
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNR--------GCRPNELTYNAMIYGLCINGRV 277
Y +I+G C G + EA++ MN++ GC PN +TY A+I GLC G +
Sbjct: 565 TYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLM 624
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D+A++L +M + N +T+ L L G ++A+ L +V+ + +Y ++
Sbjct: 625 DKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAI-QLHDVLLEGFLANTVTYNIL 683
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I GFCK+G+ EA +L M G+ P S++ + G+L AI L + M
Sbjct: 684 IRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGV 743
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
P+ V+YN +I G C+ G + +L D M+R G + Y+ L+ G C
Sbjct: 744 NPDTVAYNFLIYGCCVT-GELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 39/315 (12%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+ P + T + ++ G ++ A +FD + ++P++ Y ++ C+ + A+
Sbjct: 176 ILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAR 235
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + M + GC + TYN I GLC N RV EA + + G + +V T+ +++ GL
Sbjct: 236 EVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGL 295
Query: 307 CVVGKFD-----------------------------------QAVGYLRNVMEANMNPDV 331
C V +F+ A + V + + P +
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
Y +IN CK GK DEA SL M +GL P +++ + + G+LD A+ L +
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M ++ Y+++I G C G+++ + L D MI +G + +Y+ L+ GYC+EG
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKL-GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474
Query: 452 NVENVMQIAHEMVTK 466
+ N ++ HEM K
Sbjct: 475 ELHNAFRLYHEMTGK 489
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 166/381 (43%), Gaps = 77/381 (20%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM----------GM 209
+ + +L L+R+ ++A F +IV + PDV YT ++R C++ G
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGL-RPDVYVYTAVVRSLCELKDFIRAREVIGR 240
Query: 210 IENA-------------------KKVFDVMTVKPNLLAYN----------TMINGFCKKG 240
+E++ ++V++ + +K NLL+Y T++ G CK
Sbjct: 241 MESSGCDLSVATYNVFIRGLCKNQRVWEAVEIK-NLLSYKGLRADVGTYCTLVLGLCKVE 299
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
E E ++ MNEM+ G P+E + ++ GL G + A L+ K++ G ++ +
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI--------- 351
+++ +C GK D+A N+ + P+ +Y ++I+ FCK GK D A+
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419
Query: 352 --------------------------SLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
SL EM A GLKP V + ++ + GEL A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L +M PN ++ +I GLC A RM + L M+ + Y+ L++
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHAN-RMAEANKLFGEMVEWNVIPNEVTYNVLIE 538
Query: 446 GYCEEGNVENVMQIAHEMVTK 466
G+C+EGN ++ EMV K
Sbjct: 539 GHCKEGNTVRAFELLDEMVEK 559
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y L L +I+ A + H ++ E + V TY +IRG+CK+G I+ A +V
Sbjct: 645 TYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTV-TYNILIRGFCKLGRIQEAAEVLVN 702
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+ ++Y+T+I +C++G+L+EA K M+NRG P+ + YN +IYG C+ G
Sbjct: 703 MIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGE 762
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +A L M G K N +T+ S++ G C++ Y
Sbjct: 763 LTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 188/376 (50%), Gaps = 44/376 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y N + A+ +Q E G C +YN++L L + + + + Q+ K
Sbjct: 217 LIHGYCSDNNTEEALRLINQMG--EYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQM-K 273
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ + P+ +TY ++ GYCK+ ++ A +V ++MT K P++ YNTM+ G C +G+++
Sbjct: 274 NSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKID 333
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + ++M + P+ +TYN +I G + D A L+ +M+ G K+N TH M+
Sbjct: 334 EAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMI 393
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
K C GK D+A + ++E+ +PD +Y +ING+CK GK EA ++ EM +GLK
Sbjct: 394 KWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLK 453
Query: 364 PTVFSFNAVFRIL-----------------------------------VENGELDRAILL 388
F+ N + + ++ + DRA+ L
Sbjct: 454 LDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKL 513
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
++M + + ++YNTII GLC++ G+ D ++ ++ G D + + ++ GYC
Sbjct: 514 WEEMKETGIVATIITYNTIIRGLCLS-GKTDQAVDKLNELLEKGLVPDESTSNIIIHGYC 572
Query: 449 EEGNVENVMQIAHEMV 464
EG VE Q ++MV
Sbjct: 573 WEGAVEKAFQFHNKMV 588
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 233/480 (48%), Gaps = 43/480 (8%)
Query: 20 LVTSITSVIQR-LNPQNPSPKNISSQPLDQFSLCLGSNIVTKVI-YE--QTNPYHALFFF 75
L+ +IT+++ + NPQN L QF L I+ ++ Y+ + P L FF
Sbjct: 25 LIRTITTILTKNENPQN----------LQQFIPHLTLPIIISILSYKPLHSQPETLLSFF 74
Query: 76 NWASNPNPNPNKYHHTTPC------------YTAITDVLLS-----HSLISIAASLLKNS 118
W + N + + H P ++ +LL+ H S+ A LL++
Sbjct: 75 KWFQS-NAHSSLIHSPKPLLTLLPPLLSRRKFSDAKSLLLNFISSDHPHHSLHAHLLRSD 133
Query: 119 NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS---IK 175
+ + + + AY F++ K++ L + N+LL LVR NS +
Sbjct: 134 HTIPKPLLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLV 193
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTM 232
+ E F VK V P+V+T+ +I GYC E A ++ + M P+ + YNT+
Sbjct: 194 FSREVFQDAVKLGV-QPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTV 252
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+ CK+ +L + + + +M N G PN TYN +++G C + EA ++ M G
Sbjct: 253 LTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGM 312
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAI 351
+V T+ +M++GLC GK D+AV LR+ ME+ + PDV +Y +I+G + SD A
Sbjct: 313 LPDVWTYNTMVRGLCDEGKIDEAV-RLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAF 371
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L++EM+ARG+K + N + + G++D A ++ +M + P+ +YNT+I G
Sbjct: 372 KLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGY 431
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLL 471
C A G+M + ++D M R G LD + LL C E +++ + + K+G +L
Sbjct: 432 CKA-GKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMK-ARKRGYIL 489
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 184/391 (47%), Gaps = 53/391 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL-GVLVRVNS---IKLAEEFFHQI 184
+++ D G + A+ + + + + +YN+L+ G S KL EE +
Sbjct: 322 MVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARG 381
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
VKEN V T+ MI+ +C G I+ A V M P+ YNTMING+CK G+
Sbjct: 382 VKENGV-----THNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGK 436
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG---------- 291
+ EA K M+EM +G + + T N +++ +C+ ++D+A L K R G
Sbjct: 437 MAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGT 496
Query: 292 -----FKD--------------------NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
FKD + T+ ++++GLC+ GK DQAV L ++E
Sbjct: 497 LIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKG 556
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PD + ++I+G+C G ++A +M LKP +F+ N + R L G L++ +
Sbjct: 557 LVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGL 616
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL--DFTMYSCLL 444
L + V+YN II C + R++D DL+ M G NL D Y+ ++
Sbjct: 617 TLFNTWISKGKPMDTVTYNIIISSFCKER-RLEDAFDLMTEM--EGKNLEPDRYTYNAIV 673
Query: 445 KGYCEEGNVENVMQIAHEMVTKKGRLLKLKN 475
G + G E ++A + +KG+ +K ++
Sbjct: 674 TGLTKAGRTEEAEKLALKFA-EKGQQVKTQD 703
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 132/268 (49%), Gaps = 15/268 (5%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D TY T+I GY K + A K+++ M + ++ YNT+I G C G+ ++A +
Sbjct: 490 DEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKL 549
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
NE++ +G P+E T N +I+G C G V++A KM + K ++ T +L+GLC
Sbjct: 550 NELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCRE 609
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G ++ + + D +Y ++I+ FCK + ++A L+ EM + L+P +++
Sbjct: 610 GMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTY 669
Query: 370 NAVFRILVENGELDRAILLL-------KQMPQMDCLPNFVS----YNTIICGLCMAKGRM 418
NA+ L + G + A L +Q+ D P + Y+ I LC +G+
Sbjct: 670 NAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLC-TQGKY 728
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+D L + + G +L+ Y L+ G
Sbjct: 729 KDAMKLFQQAEQKGVSLNKYTYIKLMDG 756
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFC 237
FH + E+ + PD+ T ++RG C+ GM+E +F+ K + + YN +I+ FC
Sbjct: 583 FHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFC 642
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K+ LE+A M EM + P+ TYNA++ GL GR +EA+ L K G +
Sbjct: 643 KERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQ 702
Query: 298 T-----------HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
+ + LC GK+ A+ + + ++ + +Y +++G K K
Sbjct: 703 DTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRK 762
Query: 347 SDEAISLLKEM 357
S SLL M
Sbjct: 763 SFTTTSLLPFM 773
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 194/382 (50%), Gaps = 14/382 (3%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLKNSNK---LSDFF-ISKLIKAYGDRGNVKAA--IFW 145
T CYTA+ LL I A+S+ K + D +S +I G + AA IF
Sbjct: 91 TVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 150
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+A+ + +YS +L+ L + + A E Q+ K+ PD TY +I G C
Sbjct: 151 SMEARGLAPNEVVYS--ALIHGLCKARKMDCALEMLAQM-KKAFCTPDTITYNVLIDGLC 207
Query: 206 KMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCM-NEMMNRGCRPNE 261
K G +E A+ FD M KP++ YN +I+GFCK G + A + E GC +
Sbjct: 208 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDI 267
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
TY A++ L N +++EA LM K+ NG ++T+ ++L GLC +G+ ++A+ LR
Sbjct: 268 HTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRK 327
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+++ PDV +Y +I+G K +S EA L KEM RGL + A+ R L++ G+
Sbjct: 328 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGK 387
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+ +A + K M C+P+ V+ +T+I GL A GR+ + M G + +YS
Sbjct: 388 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA-GRIGAAVRIFKSMEARGLAPNEVVYS 446
Query: 442 CLLKGYCEEGNVENVMQIAHEM 463
L+ G C+ ++ +++ +M
Sbjct: 447 ALIHGLCKARKMDCALEMLAQM 468
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 167/342 (48%), Gaps = 4/342 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G+V+AA +F + + +Y+YN L+ + + A Q N
Sbjct: 202 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTIN 261
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEA 245
D+ TYT ++ K IE A + + +T P + YN ++NG CK G LEEA
Sbjct: 262 GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 321
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++++ GC P+ +TY ++I GL R EA L +M L G + + ++++
Sbjct: 322 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRE 381
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L GK QA + + PDV + +I+G K G+ A+ + K M ARGL P
Sbjct: 382 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 441
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++A+ L + ++D A+ +L QM + C P+ ++YN +I GLC + G ++
Sbjct: 442 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS-GDVEAARAFF 500
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D M+ +G D Y+ L+ G+C+ GN + + +M + +
Sbjct: 501 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR 542
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 153/310 (49%), Gaps = 17/310 (5%)
Query: 210 IENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
IE A + + +T P + YN ++NG CK G LEEA + ++++ GC P+ +TY +
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I GL R EA L +M L G + + ++++ L GK QA + +
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
PDV + +I+G K G+ A+ + K M ARGL P ++A+ L + ++D A+
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+L QM + C P+ ++YN +I GLC + G ++ D M+ +G D Y+ L+ G
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKS-GDVEAARAFFDEMLEAGCKPDVYTYNILISG 240
Query: 447 YCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVV 506
+C+ GN + + T G + + + T +VD W+++ + + V
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTY-TAIVD------------WLAKNKKIEEAV 287
Query: 507 VIMERTVEDG 516
+ME+ +G
Sbjct: 288 ALMEKITANG 297
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 157/311 (50%), Gaps = 10/311 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ L++ I A + + VP DV T +TMI G K G I A ++F M
Sbjct: 94 YTALIRELLQTGKIPQASSVYKTMTSHGCVP-DVVTLSTMIDGLSKAGRIGAAVRIFKSM 152
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN + Y+ +I+G CK +++ A + + +M C P+ +TYN +I GLC +G V
Sbjct: 153 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDV 212
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP---DVKSY 334
+ A+ +M G K +V T+ ++ G C G D A L E +N D+ +Y
Sbjct: 213 EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSL--AQETTINGCTIDIHTY 270
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++ K K +EA++L++++ A G PT+ ++NA+ L + G L+ AI LL+++
Sbjct: 271 TAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 330
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ V+Y ++I GL K R + L M G LD Y+ L++ + G +
Sbjct: 331 NGCTPDVVTYTSLIDGLGKEK-RSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIP 389
Query: 455 NVMQIAHEMVT 465
+ M +
Sbjct: 390 QASSVYKTMTS 400
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 134/288 (46%), Gaps = 17/288 (5%)
Query: 141 AAIFWFHQAKQIENGACLY-------------SYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
A + W + K+IE L +YN+LL L ++ ++ A + +IV +
Sbjct: 272 AIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV-D 330
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEE 244
N PDV TYT++I G K A K+F M ++ + + Y +I + G++ +
Sbjct: 331 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQ 390
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A M + GC P+ +T + MI GL GR+ A + M G N + +++
Sbjct: 391 ASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 450
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC K D A+ L + +A PD +Y ++I+G CK G + A + EM G KP
Sbjct: 451 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 510
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
V+++N + + G D A + M C N V+Y +I GLC
Sbjct: 511 DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLC 558
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 150/357 (42%), Gaps = 77/357 (21%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKK- 239
+ N P ++TY ++ G CKMG +E A +K+ D P+++ Y ++I+G K+
Sbjct: 12 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NGCTPDVVTYTSLIDGLGKEK 70
Query: 240 ----------------------------------GELEEAKKCMNEMMNRGCRPNELTYN 265
G++ +A M + GC P+ +T +
Sbjct: 71 RSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLS 130
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
MI GL GR+ A + M G N + +++ GLC K D A+ L + +A
Sbjct: 131 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 190
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN--------------- 370
PD +Y V+I+G CK G + A + EM G KP V+++N
Sbjct: 191 FCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 250
Query: 371 ---------------------AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A+ L +N +++ A+ L++++ C P +YN ++
Sbjct: 251 SHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLN 310
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GLC GR+++ DL+ +++ +G D Y+ L+ G +E ++ EM +
Sbjct: 311 GLC-KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR 366
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 4/204 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ L++ I A + + VP DV T +TMI G K G I A ++F M
Sbjct: 375 YTALIRELLQTGKIPQASSVYKTMTSHGCVP-DVVTLSTMIDGLSKAGRIGAAVRIFKSM 433
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN + Y+ +I+G CK +++ A + + +M C P+ +TYN +I GLC +G V
Sbjct: 434 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 493
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+ A+ +M G K +V T+ ++ G C G D A G ++ + + +V +Y +
Sbjct: 494 EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGAL 553
Query: 338 INGFCKIGKSDEAISLLKEMRARG 361
I+G CK + +A + M+ RG
Sbjct: 554 ISGLCKRRQLTKASLYFQHMKERG 577
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 104/188 (55%), Gaps = 1/188 (0%)
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+++EA LM K+ NG ++T+ ++L GLC +G+ ++A+ LR +++ PDV +Y
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+G K +S EA L KEM RGL + A+ R L++ G++ +A + K M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C+P+ V+ +T+I GL A GR+ + M G + +YS L+ G C+ ++
Sbjct: 121 GCVPDVVTLSTMIDGLSKA-GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179
Query: 456 VMQIAHEM 463
+++ +M
Sbjct: 180 ALEMLAQM 187
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 167/306 (54%), Gaps = 7/306 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA---- 213
L++Y++LL L R+ + +H+++ E V P++ Y +I CK G + +A
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGV-QPNLLIYNAVINALCKDGNVADAETIM 238
Query: 214 KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
KKVF+ + P+ Y +MI G C+K +L+ A + N+M GC PN +TY+ +I GLC
Sbjct: 239 KKVFES-EMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 297
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+GRV+EA L+ +M L+G T + LC +G ++ A ++ P+V +
Sbjct: 298 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I+G C G AI L M G+ P ++NA+ ILVEN + A ++L M
Sbjct: 358 YTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 417
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ C PN V+YN +I G C+ G + +++ M++ GH+ + Y+ ++KGYC+ GN
Sbjct: 418 RNGCSPNIVTYNEMIKGYCIL-GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 476
Query: 454 ENVMQI 459
+ ++I
Sbjct: 477 TSALRI 482
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 160/318 (50%), Gaps = 8/318 (2%)
Query: 152 IENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
++N C +Y+Y +L+ L +K+A FH++ ++ V P V TY +I +
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV-TYNALINILVENR 404
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
I+ A V ++M PN++ YN MI G+C G+ ++A MN M+ RG N +TYN
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+I G C +G A ++ MR G K + ++ ++ G C + K + A G +++
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ P+ +Y +I+G+CK K D A SLL+ M+ G +P V ++N + L + A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L K M + PN V+Y +I GLC G ++ ++MI G + YS L++
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLC-KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 643
Query: 446 GYCEEGNVENVMQIAHEM 463
+EG VE + E+
Sbjct: 644 ALGQEGKVEEAENLFAEL 661
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 173/360 (48%), Gaps = 38/360 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + LI G +K AI FH+ + +YN+L+ +LV IK A +
Sbjct: 356 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415
Query: 184 IVKENVVPPDVS----------------------------------TYTTMIRGYCKMGM 209
+ + P V+ TY T+I+GYC G
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A ++ D+M KP+ +Y +I GFCK ++E A NEM++ G PNE+TY A
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I G C + ++D A L+ M+ +G + NV T+ ++ GL F A + ++E
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P+V +Y +I+G CK G + A+ + +M +G P + +++++ R L + G+++ A
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L ++ + +P+ ++Y +I M+ G+++ + + RMI++G Y L+KG
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMS-GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 172/382 (45%), Gaps = 40/382 (10%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
++ F S L+ G A + +H+ L YN+++ L + ++ AE
Sbjct: 177 RMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAET 236
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
++ E+ + PD TYT+MI G+C+ +++A +VF+ M +PN + Y+T+ING
Sbjct: 237 IMKKVF-ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295
Query: 237 CKKGELEEAKKCMNEMM-----------------------------------NRGCRPNE 261
C G + EA + EM+ N+GC PN
Sbjct: 296 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 355
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
TY A+I GLC++G + A L +M +G N T+ +++ L + A L
Sbjct: 356 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ +P++ +Y +I G+C +G +A+ ++ M RG + ++N + + ++G
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
A+ +L M C P+ SY +ICG C +M+ L + M+ G + Y+
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKIS-KMESAFGLFNEMVDDGLCPNEVTYT 534
Query: 442 CLLKGYCEEGNVENVMQIAHEM 463
L+ GYC++ ++ + M
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHM 556
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 29/368 (7%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y + A K+ + +YN L+ L + N+ AEE +++
Sbjct: 534 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE 593
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E + P +V TYT MI G CK G A ++F+ M + PNLL Y+++I ++G++E
Sbjct: 594 EGIFP-NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ E+ G P+E+TY MI ++G+V+ A + +M G + + T+ ++
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Query: 304 KGL--------------------CVVG--KFDQAVGYLRNVMEANMNP--DVKSYEVVIN 339
KGL C G DQ + + A ++P V+ +++
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G+ EA LL M ++GL P ++N++ L+ +D A+ + K M C
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ Y +IC LC R ++ + M+ N D + + L+ G +G + M+
Sbjct: 833 HLNGYKELICALCQLH-RRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEF 891
Query: 460 AHEMVTKK 467
H M T++
Sbjct: 892 LHIMETRR 899
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ L AY+ ++ + G + M++ G +PN L YNA+I LC +G V +A+
Sbjct: 176 LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAE 235
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+M K+ + + T+ SM+ G C D A+ + + P+ +Y +ING
Sbjct: 236 TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C G+ +EA L++EM G+ PT + L + G + A L M C PN
Sbjct: 296 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 355
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+Y +I GLC++ G ++ L RM R G
Sbjct: 356 YTYTALISGLCVS-GLLKVAIGLFHRMSRDG 385
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 1/215 (0%)
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ + G R Y+A++ L G +M G + N+ + +++ LC
Sbjct: 168 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 227
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G A ++ V E+ M+PD +Y +I G C+ D A+ + +M G +P +
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++ + L ++G ++ A L+++M LP + I LC G +D L M
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALC-DMGCYEDAWRLFVDM 346
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + Y+ L+ G C G ++ + + H M
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 125/314 (39%), Gaps = 38/314 (12%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSD-------FFISKLIKAYGDRGNVKAAIFWFH 147
YTA+ D L + S+A + NK+ + S LI+A G G V+ A F
Sbjct: 603 YTAMIDGLCKNGSTSLALEMF---NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY--- 204
+ ++ +Y ++ + ++ A F +++K P + TY +I+G
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC-QPTLWTYGVLIKGLKNE 718
Query: 205 -----------------CKMGMIENAKKVFDVMTVK-----PNL--LAYNTMINGFCKKG 240
C G + VM+ K P L N +++ G
Sbjct: 719 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 778
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
EA + + M+++G P++ YN+++ L VD A + M G + +++ +K
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ LC + + +A N++ NPD V+I+G + G D + L M R
Sbjct: 839 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898
Query: 361 GLKPTVFSFNAVFR 374
P+ + + R
Sbjct: 899 RYMPSFHIYTILAR 912
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ + +L + ++ + + +Y ++ ++G + + M + G++P + +NAV
Sbjct: 163 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 222
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L ++G + A ++K++ + + P+ +Y ++I G C K + + ++M + G
Sbjct: 223 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR-KHDLDSALQVFNQMAKEGC 281
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ YS L+ G C+ G V + EM+
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 210/417 (50%), Gaps = 33/417 (7%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y + L +H ++S A SL++
Sbjct: 3 FFTWLSSPANST--FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLV 169
+ SD ++ S LI Y + G ++ AI + + EN C+ + +L L+
Sbjct: 61 ILETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTR--ENKLCVPFDTCRKVLEHLM 118
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNL 226
++ KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++
Sbjct: 119 KLKYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 177
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
++YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D+A L +
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDE 237
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M + N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 238 MLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
+A L+ EM +GL+P ++ + + G+LD A K+M Q + + V+Y
Sbjct: 298 LKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTA 357
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 358 LISGLC-QEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 204/407 (50%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H + S A SL++ N+
Sbjct: 3 SPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGNQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ A+ + ++ + + +L LV++ L
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWA 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++YNT++NG+
Sbjct: 123 FYEEIL-ECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ G+L E K + M G +P+ TY+ +I GLC ++D+A L +M + G N
Sbjct: 182 IRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G ++A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+LD A K+M Q + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 407
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 177/338 (52%), Gaps = 21/338 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI ++ G ++ A + F + + + + +Y +L+ ++ + A + FH++V
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF-------------------DVMTVKPNLLAY 229
P DV TY ++ G CK G I A +V+ D T+ PN++ Y
Sbjct: 389 CRPNDV-TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+++G CK +++ A + ++ M++ GC PN + Y+A+I G C G++D A+ + +M
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G+ +V T+ S++ + G+ D A+ L +++ + P+V +Y +I+G C+IG+S++
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A+ LL M +G P V ++ A+ L + G++D ++ L QM + C PN+V+Y +I
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LC A G + L+ M ++ Y C ++G+
Sbjct: 628 HLC-AAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 664
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 159/319 (49%), Gaps = 15/319 (4%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++L+ + I A+E F Q+ K +P V TYT++I K G ++ A KV M
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLP-SVHTYTSLIDRMFKDGRLDLAMKVLSQM 540
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN++ Y MI+G C+ GE E+A K ++ M +GC PN +TY A+I GL G++
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 600
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D + L +M G N T++ ++ LC G D+A L + + ++ Y
Sbjct: 601 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 660
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I GF K ++ +L+EM + G P + + + G L+ A+ L K+M +
Sbjct: 661 IQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME--- 715
Query: 398 LPNFVS-----YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+P+ V Y ++I LC+A ++++ L M R G + +++ CL+KG E
Sbjct: 716 VPSSVKTDNDMYASLIQALCLAS-QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKK 774
Query: 453 VENVMQIAHEMVTKKGRLL 471
+ +Q+ + + + G LL
Sbjct: 775 WDEALQLCYGICHEVGLLL 793
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 172/412 (41%), Gaps = 97/412 (23%)
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---P 224
L+ + A F H++ + N P+V TY T++ G+ K + K++ ++M + P
Sbjct: 117 LMEASYFDEAMSFLHRM-RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNP 175
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI---------------- 268
N +N++++ +C + + A K +N M GC P + YN I
Sbjct: 176 NPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLD 235
Query: 269 -----YG--------------------LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
YG LC G+ D+A L+ +M GF + ST+ ++
Sbjct: 236 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 295
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC K ++A + + + PDV +Y ++I+ FCK G ++A L +EMR+ G
Sbjct: 296 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 355
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG------- 416
PTV ++ A+ ++ ++ +A + +M C PN V+Y ++ GLC A
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415
Query: 417 -------------------------------------------RMQDVEDLVDRMIRSGH 433
++ +L+D M+ SG
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALL 485
+ +Y L+ G+C+ G +++ ++ +M TK G L + + T ++D +
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQM-TKCGYLPSVHTY-TSLIDRMF 525
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 127/351 (36%), Gaps = 43/351 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ VL + L + + E+ D T CK G +A + +
Sbjct: 42 TYNALVQVLSSAGQVDLGFRV-QKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIER 100
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
K + + MI+G + +EA ++ M C PN +TY ++ G ++
Sbjct: 101 EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGW 160
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
K ++ M G N S S++ C + A L + P Y + I
Sbjct: 161 CKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG 220
Query: 340 G-----------------------------------------FCKIGKSDEAISLLKEMR 358
C +GK D+A L+KEM
Sbjct: 221 SICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMM 280
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+G P +++ V L ++++A LL ++M + P+ +Y +I C A G +
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA-GLI 339
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+ + L + M G + Y+ L+ Y + V I H MV R
Sbjct: 340 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 113/278 (40%), Gaps = 9/278 (3%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
V+T +R C ++ + D +P+ + YN ++ G+++ + EM
Sbjct: 9 VATLRASLRRTCSHAAGDSEDPLKD-FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMS 67
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G + T + LC GR +A ++ + FK + M+ GL FD
Sbjct: 68 ESGFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFD 124
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ +L + + P+V +Y +++GF K + ++ M G P FN++
Sbjct: 125 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLV 184
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC-MAKGRMQDVEDLVDR----M 428
+ A LL +M C P +V YN I +C K D+ DL ++ M
Sbjct: 185 HSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM 244
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + L+ + + C G + Q+ EM+ K
Sbjct: 245 LAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 282
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 206/376 (54%), Gaps = 14/376 (3%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+ + LL + +L+ S L+ + RG V A+ ++ + L +Y+ L+
Sbjct: 311 LRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHG 370
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKP 224
L + ++ A + + ++ N + P+ ++ +++G C+ GM+ +A+ FD + ++P
Sbjct: 371 LCKQGKVQQAIQLYKEMCF-NRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRP 429
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
++ YN MI+G+ K G++EEA + + ++ P+ +T+N++IYG C N +V EA+ L+
Sbjct: 430 DVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLL 489
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
++L+G + + T+ +++ C G ++ L + ++ P V +Y VVI G CK
Sbjct: 490 ESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQ 549
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
K +E++ LL++MRA+GL P ++N + + + ++ +A LL M + P +Y
Sbjct: 550 RKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATY 609
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGH----NLDFTMYSCLLKGYCEEGNVENVMQIA 460
N +I GLC R DVED DR++ S NL Y+ ++K +C +G+ + +++
Sbjct: 610 NVLIDGLC----RYGDVED-ADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVF 664
Query: 461 HEMVTKKGRLLKLKNF 476
H+MV +KG + +K++
Sbjct: 665 HQMV-EKGFEVSIKDY 679
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 175/347 (50%), Gaps = 41/347 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
YSYN L+ L+ S++ A E + + K+ + PD+ TY + +G+ +G++ A+++
Sbjct: 221 YSYNILIHGLIVAGSMEEALELTNDMEKQGL-QPDMVTYKIVAKGFHLLGLMSGAREIIQ 279
Query: 219 VMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M +KP+L+ Y +I G C+ G +EEA + ++++ G + N + Y+ ++ LC
Sbjct: 280 KMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKR 339
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG----------------- 317
G+VDEA L+ +M N + ++ T+ ++ GLC GK QA+
Sbjct: 340 GQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAH 399
Query: 318 ------------------YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
Y +++ +N+ PDV Y ++I+G+ K+G +EA+ L K +R
Sbjct: 400 SGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRD 459
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+ + P++ +FN++ +N ++ A LL+ + P+ V+Y T++ C +G +
Sbjct: 460 KAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYC-EEGNIN 518
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +L+ M Y+ ++KG C++ +E +Q+ +M K
Sbjct: 519 KLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAK 565
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 172/367 (46%), Gaps = 44/367 (11%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V A+F + K+ + +YNSLL L + + + ++ I K++ P T +
Sbjct: 99 VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTD---IMWDVYNDI-KDSGTPQSARTSS 154
Query: 199 TMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
++ G C +A D P+++++NT+++ +CK G + AK M+
Sbjct: 155 IIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKY 214
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL--------- 306
G P+ +YN +I+GL + G ++EA L M G + ++ T+K + KG
Sbjct: 215 GILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGA 274
Query: 307 ---------------------------CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
C +G ++A+ R+++ + +V Y V+++
Sbjct: 275 REIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLS 334
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
CK G+ DEA+ LL EM A L+P + +++ + L + G++ +AI L K+M P
Sbjct: 335 SLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFP 394
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
N +++ I+ GLC KG + D D +I S D T+Y+ ++ GY + G+VE +++
Sbjct: 395 NSFAHSGILKGLC-EKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRL 453
Query: 460 AHEMVTK 466
+ K
Sbjct: 454 YKRLRDK 460
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 168/344 (48%), Gaps = 5/344 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F S ++K ++G + A +F + YN ++ V++ ++ A + +
Sbjct: 397 FAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKR 456
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKG 240
+ ++ + P + T+ ++I G+CK + A+++ + + + +P+ + Y T++N +C++G
Sbjct: 457 L-RDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEG 515
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ + + + EM + P +TY +I GLC +++E+ L+ MR G + T+
Sbjct: 516 NINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYN 575
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++++ C +A L +++ N+ P +Y V+I+G C+ G ++A +L ++ R
Sbjct: 576 TIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDR 635
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+ T ++ + + G+ RA+ + QM + + Y+ +I LC + + +
Sbjct: 636 NINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLC-KRCLINE 694
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ M+ G + D ++ +L + G+V +V ++ M+
Sbjct: 695 AKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMI 738
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 96/193 (49%), Gaps = 8/193 (4%)
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAY 229
S++L E+ ++ + PD TY T+I+ +CK + A ++ D M + +P Y
Sbjct: 555 SVQLLED-----MRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATY 609
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +I+G C+ G++E+A + + + +R ++ Y MI C+ G A + +M
Sbjct: 610 NVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVE 669
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
GF+ ++ + +++ LC ++A Y ++ ++PD + +E+++N F + G
Sbjct: 670 KGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHS 729
Query: 350 AISLLKEMRARGL 362
LL M GL
Sbjct: 730 VFELLAVMIKFGL 742
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 4/192 (2%)
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V +A ++ KM+ + ++ T+ S+L L D ++ ++ ++ +
Sbjct: 99 VHDALFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSI 155
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G C + +A+ L++ + P+V SFN + + G D A M +
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
LP+ SYN +I GL +A G M++ +L + M + G D Y + KG+ G +
Sbjct: 216 ILPDTYSYNILIHGLIVA-GSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGA 274
Query: 457 MQIAHEMVTKKG 468
+I +M+T +G
Sbjct: 275 REIIQKMLTDEG 286
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 167/306 (54%), Gaps = 7/306 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA---- 213
L++Y++LL L R+ + +H+++ E V P++ Y +I CK G + +A
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGV-QPNLLIYNAVINALCKDGNVADAETIM 238
Query: 214 KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
KKVF+ + P+ Y +MI G C+K +L+ A + N+M GC PN +TY+ +I GLC
Sbjct: 239 KKVFES-EMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 297
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+GRV+EA L+ +M L+G T + LC +G ++ A ++ P+V +
Sbjct: 298 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I+G C G AI L M G+ P ++NA+ ILVEN + A ++L M
Sbjct: 358 YTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 417
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ C PN V+YN +I G C+ G + +++ M++ GH+ + Y+ ++KGYC+ GN
Sbjct: 418 RNGCSPNIVTYNEMIKGYCIL-GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 476
Query: 454 ENVMQI 459
+ ++I
Sbjct: 477 TSALRI 482
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 160/319 (50%), Gaps = 8/319 (2%)
Query: 151 QIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
++N C +Y+Y +L+ L +K+A FH++ ++ V P V TY +I +
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV-TYNALINILVEN 403
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
I+ A V ++M PN++ YN MI G+C G+ ++A MN M+ RG N +TY
Sbjct: 404 RRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTY 463
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I G C +G A ++ MR G K + ++ ++ G C + K + A G +++
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P+ +Y +I+G+CK K D A SLL+ M+ G +P V ++N + L +
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A L K M + PN V+Y +I GLC G ++ ++MI G + YS L+
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLC-KNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642
Query: 445 KGYCEEGNVENVMQIAHEM 463
+ +EG VE + E+
Sbjct: 643 RALGQEGKVEEAENLFAEL 661
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 173/360 (48%), Gaps = 38/360 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + LI G +K AI FH+ + +YN+L+ +LV IK A +
Sbjct: 356 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415
Query: 184 IVKENVVPPDVS----------------------------------TYTTMIRGYCKMGM 209
+ + P V+ TY T+I+GYC G
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A ++ D+M KP+ +Y +I GFCK ++E A NEM++ G PNE+TY A
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I G C + ++D A L+ M+ +G + NV T+ ++ GL F A + ++E
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P+V +Y +I+G CK G + A+ + +M +G P + +++++ R L + G+++ A
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L ++ + +P+ ++Y +I M+ G+++ + + RMI++G Y L+KG
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMS-GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 172/382 (45%), Gaps = 40/382 (10%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
++ F S L+ G A + +H+ L YN+++ L + ++ AE
Sbjct: 177 RMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAET 236
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
++ E+ + PD TYT+MI G+C+ +++A +VF+ M +PN + Y+T+ING
Sbjct: 237 IMKKVF-ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295
Query: 237 CKKGELEEAKKCMNEMM-----------------------------------NRGCRPNE 261
C G + EA + EM+ N+GC PN
Sbjct: 296 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 355
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
TY A+I GLC++G + A L +M +G N T+ +++ L + A L
Sbjct: 356 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ +P++ +Y +I G+C +G +A+ ++ M RG + ++N + + ++G
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
A+ +L M C P+ SY +ICG C +M+ L + M+ G + Y+
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKIS-KMESAFGLFNEMVDDGLCPNEVTYT 534
Query: 442 CLLKGYCEEGNVENVMQIAHEM 463
L+ GYC++ ++ + M
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHM 556
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 29/368 (7%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y + A K+ + +YN L+ L + N+ AEE +++
Sbjct: 534 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE 593
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E + P +V TYT MI G CK G A ++F+ M + PNLL Y+++I ++G++E
Sbjct: 594 EGIFP-NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ E+ G P+E+TY MI ++G+V+ A + +M G + + T+ ++
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Query: 304 KGL--------------------CVVG--KFDQAVGYLRNVMEANMNP--DVKSYEVVIN 339
KGL C G DQ + + A ++P V+ +++
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G+ EA LL M ++GL P ++N++ L+ +D A+ + K M C
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ Y +IC LC R ++ + M+ N D + + L+ G +G + M+
Sbjct: 833 HLNGYKELICALCQLH-RRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEF 891
Query: 460 AHEMVTKK 467
H M T++
Sbjct: 892 LHIMETRR 899
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ L AY+ ++ + G + M++ G +PN L YNA+I LC +G V +A+
Sbjct: 176 LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAE 235
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+M K+ + + T+ SM+ G C D A+ + + P+ +Y +ING
Sbjct: 236 TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C G+ +EA L++EM G+ PT + L + G + A L M C PN
Sbjct: 296 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 355
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+Y +I GLC++ G ++ L RM R G
Sbjct: 356 YTYTALISGLCVS-GLLKVAIGLFHRMSRDG 385
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 1/215 (0%)
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ + G R Y+A++ L G +M G + N+ + +++ LC
Sbjct: 168 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 227
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G A ++ V E+ M+PD +Y +I G C+ D A+ + +M G +P +
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++ + L ++G ++ A L+++M LP + I LC G +D L M
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALC-DMGCYEDAWRLFVDM 346
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + Y+ L+ G C G ++ + + H M
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 125/314 (39%), Gaps = 38/314 (12%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSD-------FFISKLIKAYGDRGNVKAAIFWFH 147
YTA+ D L + S+A + NK+ + S LI+A G G V+ A F
Sbjct: 603 YTAMIDGLCKNGSTSLALEMF---NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY--- 204
+ ++ +Y ++ + ++ A F +++K P + TY +I+G
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC-QPTLWTYGVLIKGLKNE 718
Query: 205 -----------------CKMGMIENAKKVFDVMTVK-----PNL--LAYNTMINGFCKKG 240
C G + VM+ K P L N +++ G
Sbjct: 719 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 778
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
EA + + M+++G P++ YN+++ L VD A + M G + +++ +K
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ LC + + +A N++ NPD V+I+G + G D + L M R
Sbjct: 839 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898
Query: 361 GLKPTVFSFNAVFR 374
P+ + + R
Sbjct: 899 RYMPSFHIYTILAR 912
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ + +L + ++ + + +Y ++ ++G + + M + G++P + +NAV
Sbjct: 163 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 222
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L ++G + A ++K++ + + P+ +Y ++I G C K + + ++M + G
Sbjct: 223 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHC-RKHDLDSALQVFNQMAKEGC 281
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ YS L+ G C+ G V + EM+
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 164/303 (54%), Gaps = 5/303 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN+L+ L A ++++ VP DV TYT ++ CK + A K+ D
Sbjct: 159 YTYNTLIRGLCGRGRTANALAVLDEMLRRRCVP-DVVTYTILLEATCKRSGYKQAMKLLD 217
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P+++ YN ++NG C++G +++A + + + + GC PN ++YN ++ GLC
Sbjct: 218 EMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAE 277
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R ++A+ LM +M G NV T ++ LC G + A+ L + + P+ SY
Sbjct: 278 RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 337
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++ FCK K D+A++ L M +RG P + S+N + L +GE+D A+ LL Q+
Sbjct: 338 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 397
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C P +SYNT+I GL A G+ ++ +L++ M+ G D YS + G C E +E+
Sbjct: 398 GCAPVLISYNTVIDGLTKA-GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIED 456
Query: 456 VMQ 458
++
Sbjct: 457 AIR 459
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 145/275 (52%), Gaps = 1/275 (0%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
PDV Y M+ GYC G ++ A+++ M V+P+ YNT+I G C +G A ++E
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDE 183
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ R C P+ +TY ++ C +A L+ +MR G ++ T+ ++ G+C G+
Sbjct: 184 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 243
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A+ +L+N+ P+ SY +V+ G C + ++A L+ EM +G P V +FN
Sbjct: 244 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 303
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L G ++ A+ +L+Q+P+ C PN +SYN ++ C K +M +D M+
Sbjct: 304 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQK-KMDKAMAFLDLMVSR 362
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G D Y+ LL C G V+ +++ H++ K
Sbjct: 363 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 397
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 169/341 (49%), Gaps = 5/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L++A R K A+ + + + +YN ++ + + + A EF +
Sbjct: 199 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 258
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P VS Y +++G C E+A+++ M K PN++ +N +I+ C+KG +E A
Sbjct: 259 CEPNTVS-YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 317
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + ++ GC PN L+YN +++ C ++D+A + M G ++ ++ ++L
Sbjct: 318 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 377
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ D AV L + + P + SY VI+G K GK+ EA+ LL EM ++GL+P
Sbjct: 378 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 437
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +++ + L ++ AI ++ M PN V YN II GLC + DL
Sbjct: 438 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRR-ETHSAIDLF 496
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI +G + + Y+ L++G EG ++ + E+ ++
Sbjct: 497 AYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 537
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 137/263 (52%), Gaps = 10/263 (3%)
Query: 201 IRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
+R + G ++ A ++ +P+ +I G EA++ + C P+
Sbjct: 72 LRSLVRRGELDEALRLVGSAR-RPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPD 125
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+ YNAM+ G C G++D A+ L+A+M + + + T+ ++++GLC G+ A+ L
Sbjct: 126 VMAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAVLD 182
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
++ PDV +Y +++ CK +A+ LL EMR +G P + ++N V + + G
Sbjct: 183 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 242
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+D AI LK +P C PN VSYN ++ GLC A+ R +D E+L+ M + G + +
Sbjct: 243 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAE-RWEDAEELMGEMGQKGCPPNVVTF 301
Query: 441 SCLLKGYCEEGNVENVMQIAHEM 463
+ L+ C +G VE +++ ++
Sbjct: 302 NMLISFLCRKGLVEPALEVLEQI 324
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 111/220 (50%), Gaps = 4/220 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL + + A F +V P D+ +Y T++ C+ G ++ A ++
Sbjct: 335 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP-DIVSYNTLLTALCRSGEVDVAVELLHQ 393
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ K P L++YNT+I+G K G+ +EA + +NEM+++G +P+ +TY+ + GLC R
Sbjct: 394 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 453
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+++A K++ G + N + +++ GLC + A+ ++ P+ +Y +
Sbjct: 454 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 513
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+I G G EA LL E+ +RG+ R+L
Sbjct: 514 LIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAIRLL 553
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 167/306 (54%), Gaps = 7/306 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA---- 213
L++Y++LL L R+ + +H+++ E V P++ Y +I CK G + +A
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGV-QPNLLIYNAVINALCKDGNVADAETIM 238
Query: 214 KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
KKVF+ + P+ Y +MI G C+K +L+ A + N+M GC PN +TY+ +I GLC
Sbjct: 239 KKVFES-EMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 297
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+GRV+EA L+ +M L+G T + LC +G ++ A ++ P+V +
Sbjct: 298 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I+G C G AI L M G+ P ++NA+ ILVEN + A ++L M
Sbjct: 358 YTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 417
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ C PN V+YN +I G C+ G + +++ M++ GH+ + Y+ ++KGYC+ GN
Sbjct: 418 RNGCSPNIVTYNEMIKGYCIL-GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 476
Query: 454 ENVMQI 459
+ ++I
Sbjct: 477 TSALRI 482
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 160/319 (50%), Gaps = 8/319 (2%)
Query: 151 QIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
++N C +Y+Y +L+ L +K+A FH++ ++ V P V TY +I +
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTV-TYNALINILVEN 403
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
I+ A V ++M PN++ YN MI G+C G+ ++A MN M+ RG N +TY
Sbjct: 404 RRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTY 463
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I G C +G A ++ MR G K + ++ ++ G C + K + A G +++
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P+ +Y +I+G+CK K D A SLL+ M+ G +P V ++N + L +
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A L K M + PN V+Y +I GLC G ++ ++MI G + YS L+
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLC-KNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642
Query: 445 KGYCEEGNVENVMQIAHEM 463
+ +EG VE + E+
Sbjct: 643 RALGQEGKVEEAENLFAEL 661
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 173/360 (48%), Gaps = 38/360 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + LI G +K AI FH+ + +YN+L+ +LV IK A +
Sbjct: 356 YTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415
Query: 184 IVKENVVPPDVS----------------------------------TYTTMIRGYCKMGM 209
+ + P V+ TY T+I+GYC G
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A ++ D+M KP+ +Y +I GFCK ++E A NEM++ G PNE+TY A
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I G C + ++D A L+ M+ +G + NV T+ ++ GL F A + ++E
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P+V +Y +I+G CK G + A+ + +M +G P + +++++ R L + G+++ A
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L ++ + +P+ ++Y +I M+ G+++ + + RMI++G Y L+KG
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMS-GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 189/455 (41%), Gaps = 110/455 (24%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
++ F S L+ G A + +H+ L YN+++ L + ++ AE
Sbjct: 177 RMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAET 236
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
++ E+ + PD TYT+MI G+C+ +++A +VF+ M +PN + Y+T+ING
Sbjct: 237 IMKKVF-ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295
Query: 237 CKKGELEEAKKCMNEMM-----------------------------------NRGCRPNE 261
C G + EA + EM+ N+GC PN
Sbjct: 296 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 355
Query: 262 LTYNAMIYGLCING-----------------------------------RVDEAKMLMAK 286
TY A+I GLC++G R+ A +++
Sbjct: 356 YTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME----ANM--------------- 327
M NG N+ T+ M+KG C++G +A+ + N+++ AN+
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475
Query: 328 ----------------NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
PD SY +I GFCKI K + A L EM GL P ++ A
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ ++ +LD A LL+ M + C PN +YN +I GL + E+L MI
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL-TKQNNFSGAEELCKVMIEE 594
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G + Y+ ++ G C+ G+ +++ ++M+ +
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 29/368 (7%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y + A K+ + +YN L+ L + N+ AEE +++
Sbjct: 534 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE 593
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E + P +V TYT MI G CK G A ++F+ M + PNLL Y+++I ++G++E
Sbjct: 594 EGIFP-NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ E+ G P+E+TY MI ++G+V+ A + +M G + + T+ ++
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Query: 304 KGL--------------------CVVG--KFDQAVGYLRNVMEANMNP--DVKSYEVVIN 339
KGL C G DQ + + A ++P V+ +++
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G+ EA LL M ++GL P ++N++ L+ +D A+ + K M C
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ Y +IC LC R ++ + M+ N D + + L+ G +G + M+
Sbjct: 833 HLNGYKELICALCQLH-RRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEF 891
Query: 460 AHEMVTKK 467
H M T++
Sbjct: 892 LHIMETRR 899
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ L AY+ ++ + G + M++ G +PN L YNA+I LC +G V +A+
Sbjct: 176 LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAE 235
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+M K+ + + T+ SM+ G C D A+ + + P+ +Y +ING
Sbjct: 236 TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 295
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C G+ +EA L++EM G+ PT + L + G + A L M C PN
Sbjct: 296 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 355
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+Y +I GLC++ G ++ L RM R G
Sbjct: 356 YTYTALISGLCVS-GILKVAIGLFHRMSRDG 385
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 1/215 (0%)
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ + G R Y+A++ L G +M G + N+ + +++ LC
Sbjct: 168 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 227
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G A ++ V E+ M+PD +Y +I G C+ D A+ + +M G +P +
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++ + L ++G ++ A L+++M LP + I LC G +D L M
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALC-DMGCYEDAWRLFVDM 346
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + Y+ L+ G C G ++ + + H M
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRM 381
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 125/314 (39%), Gaps = 38/314 (12%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSD-------FFISKLIKAYGDRGNVKAAIFWFH 147
YTA+ D L + S+A + NK+ + S LI+A G G V+ A F
Sbjct: 603 YTAMIDGLCKNGSTSLALEMF---NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY--- 204
+ ++ +Y ++ + ++ A F +++K P + TY +I+G
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC-QPTLWTYGVLIKGLKNE 718
Query: 205 -----------------CKMGMIENAKKVFDVMTVK-----PNL--LAYNTMINGFCKKG 240
C G + VM+ K P L N +++ G
Sbjct: 719 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 778
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
EA + + M+++G P++ YN+++ L VD A + M G + +++ +K
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ LC + + +A N++ NPD V+I+G + G D + L M R
Sbjct: 839 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898
Query: 361 GLKPTVFSFNAVFR 374
P+ + + R
Sbjct: 899 RYMPSFHIYTILAR 912
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ + +L + ++ + + +Y ++ ++G + + M + G++P + +NAV
Sbjct: 163 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 222
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L ++G + A ++K++ + + P+ +Y ++I G C K + + ++M + G
Sbjct: 223 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHC-RKHDLDSALQVFNQMAKEGC 281
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ YS L+ G C+ G V + EM+
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 222/466 (47%), Gaps = 28/466 (6%)
Query: 15 PDQSILVTSITS----VIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYH 70
P + ++S T+ ++ +++ SPK S L S L + V ++ N
Sbjct: 34 PSSPLPISSTTNPFPELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQTHKNTDS 93
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLI 130
L FF W S + H C+ ++ + L+ L + A D +I
Sbjct: 94 VLRFFFWIS----RRKFFKHDMSCFVSMLNRLVRDRLFAPA-----------DHVRILMI 138
Query: 131 KAYGDRGNVKAAIFWFHQA-KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
K+ + G VK + + + + G L S+ +LL L + + + LA + + +++
Sbjct: 139 KSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSG- 197
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAK 246
+ P + T+ TMI CK G ++ AK + + PN Y ++I G C+ L+ A
Sbjct: 198 IRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAF 257
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ M+ GC PN +TY+ +I GLC GR++EA ++ +M G + V T+ L L
Sbjct: 258 AMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSL 317
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G +AV L + + P+++++ +I+G + GK + AI L +M A GL PT
Sbjct: 318 CDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTT 377
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++NA+ L G + A + K M LP+ +YN II C+ G +Q + D
Sbjct: 378 VTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM-GDIQKAMVIFD 436
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLK 472
+M+++G + + Y+ L+ GYC++GN+ N M++ M KG LK
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM---KGNGLK 479
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 158/311 (50%), Gaps = 7/311 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ + I+ A F +++K P+V TY T+I GYCK G + NA ++ ++
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKAGS-SPNVITYNTLIYGYCKQGNLNNAMRLLEI 472
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KP+ Y +I+GF + G+LE A MM G PN +TY A+I G +
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A L KM +G + T+ M+ G +A + +++ + P+V +Y
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL--LLKQMPQ 394
I+G C+ G++ A + EM R P +++++++ L + G + A + LL ++
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C PN +Y T++ GLC +GR + + LV M + G +Y LL G C+ VE
Sbjct: 653 YGCEPNVDTYTTLVKGLC-GEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVE 711
Query: 455 NVMQIAHEMVT 465
+ + I + M T
Sbjct: 712 SALNIFYSMDT 722
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 162/349 (46%), Gaps = 43/349 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +L+ L R ++A +H+++ + +VP V TY +I C G E A +F
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV-TYNALINQLCVEGRFETAFTIFKW 402
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P+ YN +I FC G++++A ++M+ G PN +TYN +IYG C G
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ A L+ M+ NG K + T+ ++ G GK + A +ME ++P+ +Y
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522
Query: 337 VINGFCKIGKSDEAISLL-----------------------------------KEMRARG 361
+I+G+ + K D+A++L +M +G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L P V ++ + L NG A + +M + + PN +Y+++I GLC +GR +D
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ-EGRAEDA 641
Query: 422 E--DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
E +L+ R+ G + Y+ L+KG C EG Q+ M KKG
Sbjct: 642 EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSM-QKKG 689
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 195/420 (46%), Gaps = 16/420 (3%)
Query: 71 ALFFFNW--ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISK 128
A F W + P+ Y+ C+ + D+ + I +LK + + +
Sbjct: 396 AFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI---QKAMVIFDKMLKAGSSPNVITYNT 452
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y +GN+ A+ K ++Y L+ R ++ A F+ +++
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLA---YNTMINGFCKKGELEEA 245
+ P V TYT +I GY + +++A +F M NL + YN MI+GF K + EA
Sbjct: 513 ISPNHV-TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA 571
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M+ +G PN +TY + I GLC NGR A + +M + N+ T+ S++ G
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYG 631
Query: 306 LCVVGKFDQAVGY--LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC G+ + A Y L + P+V +Y ++ G C G+ EA L+ M+ +GL+
Sbjct: 632 LCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQ 691
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P+ + A+ +N +++ A+ + M + + Y +IC LC + +++ +
Sbjct: 692 PSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALC-KENFIEEAQC 750
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDA 483
+ M+ N D +++ LL G +EG + +++ H M ++ L NF T V+ A
Sbjct: 751 IFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTL----NFQTYVMLA 806
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 126/242 (52%), Gaps = 15/242 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y S + L R LA + FH++ K N P ++ TY+++I G C+ G E+A+ ++++
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFP-NLYTYSSLIYGLCQEGRAEDAE-MYNL 646
Query: 220 MT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
+ +PN+ Y T++ G C +G EA + + M +G +P+E Y A++ G C
Sbjct: 647 LARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECK 706
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
N +V+ A + M GF+ ++S +K+++ LC ++A + ++E + N D
Sbjct: 707 NLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVV 766
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+ V+++G K G++D + LL M +R +F + E LD AI ++P
Sbjct: 767 WTVLLDGLLKEGETDLCLKLLHVMESRN---CTLNFQTYVMLARELSALDCAI----KIP 819
Query: 394 QM 395
Q+
Sbjct: 820 QI 821
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 222/466 (47%), Gaps = 28/466 (6%)
Query: 15 PDQSILVTSITS----VIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYH 70
P + ++S T+ ++ +++ SPK S L S L + V ++ N
Sbjct: 34 PSSPLPISSTTNPFPELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQTHKNTDS 93
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLI 130
L FF W S + H C+ ++ + L+ L + A D +I
Sbjct: 94 VLRFFFWIS----RRKFFKHDMSCFVSMLNRLVRDRLFAPA-----------DHVRILMI 138
Query: 131 KAYGDRGNVKAAIFWFHQA-KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
K+ + G VK + + + + G L S+ +LL L + + + LA + + +++
Sbjct: 139 KSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSG- 197
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAK 246
+ P + T+ TMI CK G ++ AK + + PN Y ++I G C+ L+ A
Sbjct: 198 IRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAF 257
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ M+ GC PN +TY+ +I GLC GR++EA ++ +M G + V T+ L L
Sbjct: 258 AMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSL 317
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G +AV L + + P+++++ +I+G + GK + AI L +M A GL PT
Sbjct: 318 CDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTT 377
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++NA+ L G + A + K M LP+ +YN II C+ G +Q + D
Sbjct: 378 VTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM-GDIQKAMVIFD 436
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLK 472
+M+++G + + Y+ L+ GYC++GN+ N M++ M KG LK
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM---KGNGLK 479
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 183/391 (46%), Gaps = 13/391 (3%)
Query: 85 PNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIF 144
P Y +T P ++ D S + + + K + + LI G + AI
Sbjct: 305 PTVYTYTIP-LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIG 363
Query: 145 WFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+H K + +G +YN+L+ L + A F ++ +P TY +I+
Sbjct: 364 LYH--KMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLP-STQTYNEIIK 420
Query: 203 GYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
+C MG I+ A +FD M PN++ YNT+I G+CK+G L A + + M G +P
Sbjct: 421 CFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKP 480
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ TY +I G G+++ A L M +G N T+ +++ G + K D A+
Sbjct: 481 DAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALF 540
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
++E+ P ++Y V+I+GF K EA + +M +GL P V ++ + L N
Sbjct: 541 WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRN 600
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE--DLVDRMIRSGHNLDF 437
G A + +M + + PN +Y+++I GLC +GR +D E +L+ R+ G +
Sbjct: 601 GRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ-EGRAEDAEMYNLLARLTHYGCEPNV 659
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
Y+ L+KG C EG Q+ M KKG
Sbjct: 660 DTYTTLVKGLCGEGRCYEADQLVVSM-QKKG 689
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 158/311 (50%), Gaps = 7/311 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ + I+ A F +++K P+V TY T+I GYCK G + NA ++ ++
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKAGS-SPNVITYNTLIYGYCKQGNLNNAMRLLEI 472
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KP+ Y +I+GF + G+LE A MM G PN +TY A+I G +
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A L KM +G + T+ M+ G +A + +++ + P+V +Y
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL--LLKQMPQ 394
I+G C+ G++ A + EM R P +++++++ L + G + A + LL ++
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C PN +Y T++ GLC +GR + + LV M + G +Y LL G C+ VE
Sbjct: 653 YGCEPNVDTYTTLVKGLC-GEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVE 711
Query: 455 NVMQIAHEMVT 465
+ + I + M T
Sbjct: 712 SALNIFYSMDT 722
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 194/420 (46%), Gaps = 16/420 (3%)
Query: 71 ALFFFNW--ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISK 128
A F W + P+ Y+ C+ + D+ + I +LK + + +
Sbjct: 396 AFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI---QKAMVIFDKMLKAGSSPNVITYNT 452
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y +GN+ A+ K ++Y L+ R ++ A F+ +++
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLA---YNTMINGFCKKGELEEA 245
+ P V TYT +I GY + +++A +F M NL + YN MI+GF K + EA
Sbjct: 513 ISPNHV-TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA 571
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M+ +G PN +TY + I GLC NGR A + +M + N+ T+ S++ G
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYG 631
Query: 306 LCVVGKFDQAVGY--LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC G+ + A Y L + P+V +Y ++ G C G+ EA L+ M+ +GL+
Sbjct: 632 LCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQ 691
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P+ + A+ +N +++ A+ + M + + Y +IC LC + +++ +
Sbjct: 692 PSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALC-KENFIEEAQC 750
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDA 483
+ M+ N D ++ LL G +EG + +++ H M ++ L NF T V+ A
Sbjct: 751 IFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTL----NFQTYVMLA 806
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 127/242 (52%), Gaps = 15/242 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y S + L R LA + FH++ K N P ++ TY+++I G C+ G E+A+ ++++
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFP-NLYTYSSLIYGLCQEGRAEDAE-MYNL 646
Query: 220 MT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
+ +PN+ Y T++ G C +G EA + + M +G +P+E Y A++ G C
Sbjct: 647 LARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECK 706
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
N +V+ A + M GF+ ++S +K+++ LC ++A + ++E + N D +
Sbjct: 707 NLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVA 766
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+ V+++G K G++D + LL M +R +F + E LD AI ++P
Sbjct: 767 WTVLLDGLLKEGETDLCLKLLHVMESRN---CTLNFQTYVMLARELSALDCAI----KIP 819
Query: 394 QM 395
Q+
Sbjct: 820 QI 821
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 182/341 (53%), Gaps = 5/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+KA V+ A+ + ++ +L+ V SIK A ++++
Sbjct: 191 LMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMG 250
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
P V T +I GYCK+G +E+A +P+ + YNT +NG C+ G + A
Sbjct: 251 CSPTKV-TVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHA 309
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K M+ M+ G P+ TYN ++ LC NG+++EAK ++ +M G +++T +++
Sbjct: 310 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVA 369
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + ++A+ R V ++PDV ++ ++IN CK+G A+ L +EM++ G P
Sbjct: 370 LCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPD 429
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++N + L G+L +A+ LLK+M C + V+YNTII GLC K R+++ E++
Sbjct: 430 EVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLC-KKMRIEEAEEVF 488
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D+M G + + ++ L+ G C++ +++ Q+ +M+++
Sbjct: 489 DQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISE 529
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 165/316 (52%), Gaps = 5/316 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N L+ L +V +LA F ++ K + PD TY T+I C +G + A +
Sbjct: 395 VYTFNILINALCKVGDPQLALRLFEEM-KSSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 453
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + + YNT+I+G CKK +EEA++ ++M +G N +T+N +I GLC +
Sbjct: 454 KEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 513
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+D+A L+++M G + N T+ S+L C G +A L+ + DV +Y
Sbjct: 514 KRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTY 573
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ING CK G++ A+ LL+ MR +G++ T ++N V + L A+ L ++M +
Sbjct: 574 GTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTE 633
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ P+ +Y + GLC G +++ D + M+ G +F+ + L +G G ++
Sbjct: 634 VGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLG-MD 692
Query: 455 NVMQIAHEMVTKKGRL 470
+ A E++ +K L
Sbjct: 693 DYFIRAIEIIIEKADL 708
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 160/309 (51%), Gaps = 5/309 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN ++ L + ++ A+ +Q+V+ +P D++T+ T+I C +E A +
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLP-DITTFNTLIVALCSGNRLEEALDLA 383
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+T+K P++ +N +IN CK G+ + A + EM + GC P+E+TYN +I LC
Sbjct: 384 RQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSL 443
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++ +A L+ +M G + T+ +++ GLC + ++A + ++ + ++
Sbjct: 444 GKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 503
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G CK + D+A L+ +M + GL+P ++N++ + G++ +A +L+ M
Sbjct: 504 NTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTA 563
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ V+Y T+I GLC A GR Q L+ M G Y+ +++ N
Sbjct: 564 NGFEVDVVTYGTLINGLCKA-GRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTR 622
Query: 455 NVMQIAHEM 463
+ M + EM
Sbjct: 623 DAMNLFREM 631
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 132/247 (53%), Gaps = 2/247 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ + + YN ++N + +++ + +EM RG +P+ +T+N ++ LC +V A
Sbjct: 146 IQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAV 205
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+++ +M +G + +T ++++G G A+ ++E +P + V+ING+
Sbjct: 206 LMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGY 265
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK+G+ ++A+ +++ A G +P ++N L +NG + A+ ++ M Q P+
Sbjct: 266 CKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDV 325
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
+YN ++ LC G++++ + ++++M+ G D T ++ L+ C +E + +A
Sbjct: 326 FTYNIVVNCLC-KNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384
Query: 462 EMVTKKG 468
+ VT KG
Sbjct: 385 Q-VTLKG 390
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 178/342 (52%), Gaps = 4/342 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +++ Y + G++ A+ Q + S N ++ + ++ A F ++
Sbjct: 228 TTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSN 287
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
++ PD T+ T++ G CK G +++A ++ DVM + P++ YN++I+G CK GE++
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +++M+ R C PN +TYN +I LC +V+EA L + G +V T S++
Sbjct: 348 EAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+GLC+ A+ + PD +Y ++I+ C GK DEA+++LK+M G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+V ++N + + ++ A + +M N V+YNT+I GLC ++ R++D
Sbjct: 468 RSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR-RVEDASQ 526
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
L+D+MI G D Y+ LL +C G+++ I M +
Sbjct: 527 LMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 175/346 (50%), Gaps = 5/346 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + L+ G+VK AI Q +Y+YNS++ L ++ +K A EF Q
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQ 355
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
++ + P V TY T+I CK +E A ++ V+T K P++ +N++I G C
Sbjct: 356 MITRDCSPNTV-TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
A + EM ++GC P+E TYN +I LC G++DEA ++ +M L+G +V T+
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G C K +A + ++ + +Y +I+G CK + ++A L+ +M
Sbjct: 475 TLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIME 534
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G KP F++N++ G++ +A +++ M C P+ V+Y T+I GLC A GR++
Sbjct: 535 GQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA-GRVEV 593
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+ + G L Y+ +++G + + + EM+ +
Sbjct: 594 ASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 169/332 (50%), Gaps = 17/332 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++NSL+ L + ++A E F ++ + PD TY +I C G ++ A +
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + +++ YNT+I+GFCK ++ EA++ +EM G N +TYN +I GLC + R
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++A LM +M + G K + T+ S+L C G +A ++ + PD+ +Y
Sbjct: 521 VEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM-PQM 395
+I+G CK G+ + A LL+ ++ +G+ T ++N V + L + AI L ++M Q
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ P+ VSY + GLC G +++ D + ++ G +F+ L +G E
Sbjct: 641 EAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET 700
Query: 456 VMQIAHEMVTKKGR-----------LLKLKNF 476
++++ + MV +K R LLK++ F
Sbjct: 701 LVKLVN-MVMQKARFSEEEVSMVKGLLKIRKF 731
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 129/255 (50%), Gaps = 12/255 (4%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS---YNSLLGVLVRVNSIKLAEE 179
+F + LI + +G + A+ + KQ+E C S YN+L+ + N I+ AEE
Sbjct: 435 EFTYNMLIDSLCSKGKLDEAL---NMLKQMELSGCARSVITYNTLIDGFCKANKIREAEE 491
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGF 236
F ++ V V TY T+I G CK +E+A ++ D M + KP+ YN+++ F
Sbjct: 492 IFDEMEVHGVSRNSV-TYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHF 550
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C+ G++++A + M + GC P+ +TY +I GLC GRV+ A L+ +++ G
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTP 610
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEAN-MNPDVKSYEVVINGFCKIGKS-DEAISLL 354
+ +++GL K +A+ R ++E N PD SY +V G C G EA+ L
Sbjct: 611 HAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFL 670
Query: 355 KEMRARGLKPTVFSF 369
E+ +G P S
Sbjct: 671 VELLEKGFVPEFSSL 685
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 155/325 (47%), Gaps = 10/325 (3%)
Query: 150 KQIENGACLYSYNSLLGVLVRVNSIKLAEEFF---HQIVKENVVPPDVSTYTTMIRGYCK 206
+ ++N C + L ++ +L +E H ++ + + PD Y M+
Sbjct: 107 EDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVD 166
Query: 207 ---MGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+ ++E A V +KP++ +N +I C+ +L A + +M + G P+E T
Sbjct: 167 GNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFK-DNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
+ ++ G G +D A + +M G NVS + ++ G C G+ + A+ +++ +
Sbjct: 227 FTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVN-VIVHGFCKEGRVEDALNFIQEM 285
Query: 323 M-EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ PD ++ ++NG CK G AI ++ M G P V+++N+V L + GE
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE 345
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+ A+ L QM DC PN V+YNT+I LC + ++++ +L + G D ++
Sbjct: 346 VKEAVEFLDQMITRDCSPNTVTYNTLISTLC-KENQVEEATELARVLTSKGILPDVCTFN 404
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTK 466
L++G C N M++ EM +K
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSK 429
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 175/377 (46%), Gaps = 13/377 (3%)
Query: 106 SLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS-YNSL 164
S IS A+ NS LS + KL+ + + + AA+ F+ A + N + + Y +
Sbjct: 34 STISFASP---NSAALSSSDV-KLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEI 89
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV----FDVM 220
L L R S + + K + S + +I Y + + + V D
Sbjct: 90 LLRLGRSGSFDDMRKILEDM-KNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDF 148
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
+KP+ YN M+N L+ + +M G +P+ T+N +I LC ++ A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+++ M G + T ++++G G D A+ ++E + S V+++G
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 341 FCKIGKSDEAISLLKEMRAR-GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
FCK G+ ++A++ ++EM + G P ++FN + L + G + AI ++ M Q P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ +YN++I GLC G +++ + +D+MI + + Y+ L+ C+E VE ++
Sbjct: 329 DVYTYNSVISGLCKL-GEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 460 AHEMVTKKGRLLKLKNF 476
A ++T KG L + F
Sbjct: 388 AR-VLTSKGILPDVCTF 403
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 39/205 (19%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++YNSLL R IK A + Q + N PD+ TY T+I G CK G +E A K+
Sbjct: 541 FTYNSLLTHFCRGGDIKKAADIV-QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 219 VMTVKPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLC-I 273
+ +K L AYN +I G +K + EA EM+ + P+ ++Y + GLC
Sbjct: 600 SIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNG 659
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVST---------------------------------HK 300
G + EA + ++ GF S+
Sbjct: 660 GGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV 719
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEA 325
SM+KGL + KF A+ L V+++
Sbjct: 720 SMVKGLLKIRKFQDALATLGGVLDS 744
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 191/362 (52%), Gaps = 20/362 (5%)
Query: 126 ISKLIKAYG--DRGNVKAAIFWFHQAKQIENG-------------ACLYSYNSLLGVLVR 170
+ ++++ YG D A I F +A Q+EN + +YN ++G
Sbjct: 126 VMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCS 185
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLL 227
+ LA E F +++K+N P V TYT +I G I+ A K+ D M K P+ L
Sbjct: 186 RGKLDLALEIFEELLKDNC-EPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTL 244
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YN +I G CK+ +++A + + + +RGC+P+ +TYN ++ L G+ E + L+++M
Sbjct: 245 TYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEM 304
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
G K NV TH ++ LC GK ++AV LR++ E + PD Y+ +I GFC+ G+
Sbjct: 305 ISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRL 364
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
D A L+ M + G P + ++N + L G+ D+A+ + +++ ++ C PN SYNT+
Sbjct: 365 DLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTL 424
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
L + R + +E ++ +++ G + D Y+ L+ C +G V+ +++ +M + +
Sbjct: 425 FSALWSSGDRYRALE-MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGR 483
Query: 468 GR 469
R
Sbjct: 484 YR 485
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 198/415 (47%), Gaps = 53/415 (12%)
Query: 100 DVLLSHSLIS--IAASLLKNSNKLSDFFISK-----------LIKAYGDRGNVKAAIFWF 146
DV ++LIS I A+ L+N+N++ D S+ +I ++ RG + A+ F
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIF 196
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ + + +Y L+ + I +A + +++ + + PD TY +IRG CK
Sbjct: 197 EELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGL-EPDTLTYNAIIRGMCK 255
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
M++ A ++ ++ KP+++ YN ++ +G+ E +K ++EM++ GC+PN +T
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT 315
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
++ +I LC +G+V+EA L+ M+ G K + + ++ G C G+ D A +L ++
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMI 375
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE-- 381
PD+ +Y ++ G C+ GK+D+A+ + +++ G P V S+N +F L +G+
Sbjct: 376 SDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRY 435
Query: 382 ---------------------------------LDRAILLLKQMPQMDCLPNFVSYNTII 408
+D AI LL M PN VSYN I+
Sbjct: 436 RALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIIL 495
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC R D +++ M G + T Y L++G G M++A+ +
Sbjct: 496 LGLCKVN-RANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 151/288 (52%), Gaps = 3/288 (1%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV--KPNLLAYNTMINGFC 237
+F + + + PDV T +I+G+ I A +V +++ KP++ AYN +I+GF
Sbjct: 90 YFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFI 149
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K +LE A + ++ M +RG P+ +TYN MI C G++D A + ++ + + V
Sbjct: 150 KANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVI 209
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ + G D A+ L ++ + PD +Y +I G CK D+A LL+ +
Sbjct: 210 TYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSL 269
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+RG KP + ++N + R L+ G+ L+ +M + C PN V+++ +I LC G+
Sbjct: 270 SSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLC-RDGK 328
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+++ +L+ M G D Y L+ G+C EG ++ + M++
Sbjct: 329 VEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMIS 376
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC---KIGKSDEAISLLKEMR 358
+L C GK+++++ +L +++ PDV +I GF IGK+ + +L+
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILE--- 131
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
R KP VF++NA+ ++ +L+ A +L +M LP+ V+YN +I C ++G++
Sbjct: 132 -RYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFC-SRGKL 189
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ + +++ Y+ L++ +G ++ M++ EM++K
Sbjct: 190 DLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSK 237
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 184/365 (50%), Gaps = 40/365 (10%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
+K A F + + ++ + + ++N ++ +L R K A++F + + V P+V TY
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHM-EVYGVKPNVVTYN 256
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVK----------------------------------- 223
T+I GYC G E A K+F M K
Sbjct: 257 TVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLES 316
Query: 224 ---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
PN + YN +I+G C KG+L++A +EMMNRG + TYN +I+ L + R++EA
Sbjct: 317 GLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEA 376
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+ ++ +MR G + +V T+ + G C G +A+ ++E N+ P V++Y +I+
Sbjct: 377 EDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDV 436
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
F K + EA K+ G+ P + FNA+ NG +DRA LLK+M +P+
Sbjct: 437 FGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPD 496
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V++NT++ G C + ++++ + L+D M G D Y+ L+ GY + G++++ +++
Sbjct: 497 EVTFNTLMQGYCRER-KVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVF 555
Query: 461 HEMVT 465
EM++
Sbjct: 556 DEMLS 560
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 155/297 (52%), Gaps = 5/297 (1%)
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYN 230
IK+A + ++VK N+ + T+ MI C+ G + AK +V VKPN++ YN
Sbjct: 198 IKMAWFVYEEMVKMNI-KSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYN 256
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
T+ING+C +G+ E A K M ++ +P+ TYN+ I LC R++EA ++ K+ +
Sbjct: 257 TVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLES 316
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G N T+ +++ G C G D+A Y +M + V +Y ++I+ + +EA
Sbjct: 317 GLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEA 376
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
++KEMR +G++P V ++N G +A+ L +M + + P +Y ++I
Sbjct: 377 EDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLI-D 435
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ + RM + E+ + I+ G D M++ L+ G+C GN++ Q+ EM K
Sbjct: 436 VFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK 492
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 146/283 (51%), Gaps = 4/283 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI ++G++ A + + A +++YN L+ L I+ AE+ ++ +E
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM-REK 386
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V PDV TY I GYC+ G + A +FD M ++P + Y ++I+ F K+ + EA
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEA 446
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ + + G P+ + +NA+I G C+NG +D A L+ +M + T ++++G
Sbjct: 447 EEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C K ++A L + E + PD SY +I+G+ K G +A+ + EM + G PT
Sbjct: 507 YCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPT 566
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+ ++NA+ + + GE D A LL++M P+ +Y +I
Sbjct: 567 LLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVI 609
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 151/350 (43%), Gaps = 40/350 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I Y RG +AA F K Y+YNS + L + I+ A ++++
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------------------- 221
+VP V TY +I G C G ++ A D M
Sbjct: 318 LVPNAV-TYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEA 376
Query: 222 -----------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
V+P+++ YN ING+C+ G ++A +EM+ + RP TY ++I
Sbjct: 377 EDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDV 436
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
R+ EA+ K G ++ +++ G CV G D+A L+ + A + PD
Sbjct: 437 FGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPD 496
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
++ ++ G+C+ K +EA LL EM+ RG+KP S+N + + G++ A+ +
Sbjct: 497 EVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFD 556
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+M + P ++YN +I G G E+L+ M G D + Y
Sbjct: 557 EMLSLGFDPTLLTYNALIQGYSKI-GEADHAEELLREMQSKGITPDDSTY 605
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 1/219 (0%)
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
EM+ + + +T+N MI LC G+ +AK + M + G K NV T+ +++ G C+ G
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
KF+ A + + + N+ PD +Y I+ CK + +EA +L ++ GL P ++N
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
A+ G+LD+A +M + + +YN +I L + K R+++ ED++ M
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEK-RIEEAEDMIKEMRE 385
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
G D Y+ + GYC GN + + + EMV K R
Sbjct: 386 KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIR 424
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 165/311 (53%), Gaps = 5/311 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ ++ A + ++ + + P+ TY T+I G+CK+G ++ A KVFD
Sbjct: 521 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 580
Query: 220 M----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M VKP + YN +I G+C +G+L+ A + M+ RG TYN +++ L ++G
Sbjct: 581 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 640
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R EA L+ +M G +V T+ ++ G C G +A+ N+ + V +Y
Sbjct: 641 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 700
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I K G+ E L E RG++P + +NA+ +G +DRA ++ +M +
Sbjct: 701 ALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 760
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ V+YNT++ GLC+ GR+ + L+D M G D Y+ L+ GY +G+V++
Sbjct: 761 RIAPDDVTYNTLMRGLCLL-GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 819
Query: 456 VMQIAHEMVTK 466
++I +EM+ K
Sbjct: 820 ALRIRNEMMNK 830
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 166/317 (52%), Gaps = 8/317 (2%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRV 171
L K K + LI Y D+G + A+ + + + +E G + +YN L+ L
Sbjct: 582 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLY--RDRMVERGVAMTVATYNLLVHALFMD 639
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
A E ++ + + P DV TY +I G+CK G ++ A ++F+ M+ V+ ++
Sbjct: 640 GRGTEAYELVEEMGGKGLAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 698
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y +I KKG+++E K +E + RG RP+ + YNA+I +G +D A +M +M
Sbjct: 699 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 758
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ T+ ++++GLC++G+ D+A + + E + PD+ +Y +I+G+ G
Sbjct: 759 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 818
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A+ + EM +G PT+ ++NA+ + L +NG+ D A ++K+M + P+ +Y ++I
Sbjct: 819 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 878
Query: 409 CGLCMAKGRMQDVEDLV 425
GL R D E L
Sbjct: 879 EGLTTEDERAIDDERLA 895
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 141/276 (51%), Gaps = 4/276 (1%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+T+ M+R C G A ++ M +PN + YNT+I GFC +G ++ A M EM
Sbjct: 488 TTTFNIMLRHLCSAGKPARALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMR 546
Query: 254 NR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGK 311
R G PN+ TY +I G C GRVDEA + +M G K + +++ G C GK
Sbjct: 547 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 606
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A+ Y ++E + V +Y ++++ G+ EA L++EM +GL P VF++N
Sbjct: 607 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 666
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ + G + +A+ + + M + V+Y +I L KG++Q+ + L D +R
Sbjct: 667 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS-KKGQVQETDKLFDEAVRR 725
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G D +Y+ L+ + GN++ +I EM K+
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 761
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
S A +L +M L +FN + R L G+ RA+ LL+QMP+ PN V+YNT
Sbjct: 469 SAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNT 524
Query: 407 IICGLCMAKGRMQDVEDLVDRMI-RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+I G C ++GR+Q D++ M R G + Y ++ G+C+ G V+ +++ EM+T
Sbjct: 525 VIAGFC-SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 583
Query: 466 K 466
K
Sbjct: 584 K 584
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 171/338 (50%), Gaps = 5/338 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+ Y N++ A + K+ A Y +++ L + A E F +++
Sbjct: 413 LIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWG 472
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P++ YTT+++G K G E A K+ VM + P++ YNT+I GFCK G++EE
Sbjct: 473 L-KPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEG 531
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + EM+ +G +PN TY A I+G C G + A+ +M +G N ++ G
Sbjct: 532 KSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDG 591
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G +A R +++ + PDV+++ V+I+G K GK EA+ + E+ +GL P
Sbjct: 592 YCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPD 651
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
VF++ ++ L + G+L A L M + PN V+YN +I GLC G + +L
Sbjct: 652 VFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKL-GEIAKARELF 710
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D + G + YS ++ GYC+ N+ Q+ H M
Sbjct: 711 DGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGM 748
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 168/344 (48%), Gaps = 11/344 (3%)
Query: 127 SKLIKAYGDRGNV---KAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ LI AY G V K +F + I N L +Y+ ++ L R + A E
Sbjct: 236 TNLINAYCRVGKVEEGKHVLFDMEEKGCIPN---LVTYSVVIAGLCRAGDVDEALELKRS 292
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKG 240
+ + ++P D Y T+I G+C+ K + D M +KP+ +AY +INGF K+
Sbjct: 293 MANKGLLP-DNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQS 351
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++ A + EM R + N TY A+I+GLC G +++A+ L ++M + G K ++ T+
Sbjct: 352 DIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYN 411
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++G V ++A L + + N+ + ++NG C G A L +EM +
Sbjct: 412 CLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISW 471
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GLKP + + + + LV+ G + AI +L M P+ YNT+I G C A G+M++
Sbjct: 472 GLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKA-GKMEE 530
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ + MI G + Y + GYC G ++ + EM+
Sbjct: 531 GKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEML 574
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 153/314 (48%), Gaps = 13/314 (4%)
Query: 160 SYNSLLGVLVRVNSI----KLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
+Y +L+ V+ + I ++ EE F + +K N TY +I G CK+G +E A+
Sbjct: 339 AYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTF-----TYYALIHGLCKIGDLEKAED 393
Query: 216 VFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+F MT +KP++ YN +I G+ K +E+A + + E+ N A++ GLC
Sbjct: 394 LFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLC 453
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G + A L +M G K N+ + +++KGL G+F++A+ L + + ++PDV
Sbjct: 454 HCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVF 513
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
Y VI GFCK GK +E S L EM A+GLKP V+++ A GE+ A +M
Sbjct: 514 CYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEM 573
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
PN V +I G C G M+ G D +S L+ G + G
Sbjct: 574 LDSGIAPNDVICTDLIDGYC-KDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGK 632
Query: 453 VENVMQIAHEMVTK 466
++ M + E++ K
Sbjct: 633 LQEAMGVFSELLDK 646
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 185/368 (50%), Gaps = 12/368 (3%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEE 179
+D + LI Y GN A F ++ G + +++ L+ L + ++ A
Sbjct: 581 NDVICTDLIDGYCKDGNTTKAFAKFRC--MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMG 638
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGF 236
F +++ + +VP DV TYT++I CK G ++ A ++ D M K PN++ YN +ING
Sbjct: 639 VFSELLDKGLVP-DVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGL 697
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
CK GE+ +A++ + + +G N +TY+ +I G C + + EA L M+L G +
Sbjct: 698 CKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDS 757
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
+ +++ G C G ++A+ ++E + ++ +I+GF K+GK EA L+++
Sbjct: 758 FVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVED 816
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M + P ++ + G + A L +M + + +PN ++Y +++ G G
Sbjct: 817 MVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRI-G 875
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
R ++ L D M+ G D +S ++ + +EGN +++ +M+++ + KN
Sbjct: 876 RRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNV--CKNL 933
Query: 477 LTRVVDAL 484
T ++DAL
Sbjct: 934 YTILIDAL 941
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 151/355 (42%), Gaps = 79/355 (22%)
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
++K+ + PDV Y T+I G+CK G +E K M +KPN+ Y I+G+C+ G
Sbjct: 502 VMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAG 561
Query: 241 ELEEAKKCMNEMMNRGCRPNEL-----------------------------------TYN 265
E++ A++ EM++ G PN++ T++
Sbjct: 562 EMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHS 621
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+I+GL NG++ EA + +++ G +V T+ S++ LC G A ++ +
Sbjct: 622 VLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK 681
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+NP++ +Y +ING CK+G+ +A L + +GL +++ + ++ L A
Sbjct: 682 GINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEA 741
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAK------------------------------ 415
L M + P+ Y +I G C A
Sbjct: 742 FQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGF 801
Query: 416 ---GRM----QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G++ Q VED+VD I H Y+ L++ +C GN++ Q+ EM
Sbjct: 802 FKLGKLIEAYQLVEDMVDNHITPNH----VTYTILIEYHCTVGNIKEAEQLFMEM 852
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 9/256 (3%)
Query: 215 KVFDVM--TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
KV+ M + P++ Y +IN +C+ G++EE K + +M +GC PN +TY+ +I GLC
Sbjct: 219 KVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLC 278
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G VDEA L M G + + +++ G C + + L + + PD
Sbjct: 279 RAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHV 338
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y +INGF K A + +EM AR +K F++ A+ L + G+L++A L +M
Sbjct: 339 AYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEM 398
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR-SGHNLDFTMYSC--LLKGYCE 449
M P+ +YN +I G ++Q++E + +I NL Y C ++ G C
Sbjct: 399 TMMGIKPDIQTYNCLIEGYY----KVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCH 454
Query: 450 EGNVENVMQIAHEMVT 465
G++ ++ EM++
Sbjct: 455 CGDLTRANELFQEMIS 470
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 136/278 (48%), Gaps = 4/278 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++++ + ++ A + FH + K VPPD Y +I G CK G E A +F
Sbjct: 724 TYSTIIAGYCKSANLTEAFQLFHGM-KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLG 782
Query: 220 MTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
M + + A+N +I+GF K G+L EA + + +M++ PN +TY +I C G +
Sbjct: 783 MVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNI 842
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA+ L +M+ NV T+ S+L G +G+ + ++ + PD ++ V+
Sbjct: 843 KEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVM 902
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++ K G +A+ L+ +M + G+ + + L ++ L + +L ++ +
Sbjct: 903 VDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGS 962
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
+ + T++C A GR + +++ M+RS NL
Sbjct: 963 KLSLATCGTLVCCFHRA-GRTDEALRVLESMVRSFLNL 999
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 177/338 (52%), Gaps = 21/338 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI ++ G ++ A + F + + + + +Y +L+ ++ + A + FH++V
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF-------------------DVMTVKPNLLAY 229
P DV TY ++ G CK G I A +V+ D T+ PN++ Y
Sbjct: 389 CRPNDV-TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+++G CK +++ A + ++ M++ GC PN + Y+A+I G C G++D A+ + +M
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G+ +V T+ S++ + G+ D A+ L +++ + P+V +Y +I+G C+IG+S++
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A+ LL M +G P V ++ A+ L + G++D ++ L QM + C PN+V+Y +I
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LC A G + L+ M ++ Y C ++G+
Sbjct: 628 HLC-AAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 664
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 158/320 (49%), Gaps = 19/320 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++L+ + I A+E F Q+ K +P V TYT++I K G ++ A KV M
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLP-SVHTYTSLIDRMFKDGRLDLAMKVLSQM 540
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN++ Y MI+G C+ GE E+A K ++ M +GC PN +TY A+I GL G++
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 600
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D + L +M G N T++ ++ LC G D+A L + + ++ Y
Sbjct: 601 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 660
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I GF K ++ +L+EM + G P + + + G L+ A+ L K+M +
Sbjct: 661 IQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME--- 715
Query: 398 LPNFVS-----YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+P+ V Y ++I LC+A ++++ L M R G + +++ CL+KG E
Sbjct: 716 VPSSVKTDNDMYASLIQALCLAS-QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKK 774
Query: 453 VENVMQ----IAHEMVTKKG 468
+ +Q I HE V +G
Sbjct: 775 WDEALQLCYGICHEGVNWQG 794
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 172/412 (41%), Gaps = 97/412 (23%)
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---P 224
L+ + A F H++ + N P+V TY T++ G+ K + K++ ++M + P
Sbjct: 117 LMEASYFDEAMSFLHRM-RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNP 175
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI---------------- 268
N +N++++ +C + + A K +N M GC P + YN I
Sbjct: 176 NPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLD 235
Query: 269 -----YG--------------------LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
YG LC G+ D+A L+ +M GF + ST+ ++
Sbjct: 236 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 295
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC K ++A + + + PDV +Y ++I+ FCK G ++A L +EMR+ G
Sbjct: 296 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 355
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG------- 416
PTV ++ A+ ++ ++ +A + +M C PN V+Y ++ GLC A
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415
Query: 417 -------------------------------------------RMQDVEDLVDRMIRSGH 433
++ +L+D M+ SG
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALL 485
+ +Y L+ G+C+ G +++ ++ +M TK G L + + T ++D +
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQM-TKCGYLPSVHTY-TSLIDRMF 525
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 127/351 (36%), Gaps = 43/351 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ VL + L + + E+ D T CK G +A + +
Sbjct: 42 TYNALVQVLSSAGQVDLGFRV-QKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIER 100
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
K + + MI+G + +EA ++ M C PN +TY ++ G ++
Sbjct: 101 EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGW 160
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
K ++ M G N S S++ C + A L + P Y + I
Sbjct: 161 CKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG 220
Query: 340 G-----------------------------------------FCKIGKSDEAISLLKEMR 358
C +GK D+A L+KEM
Sbjct: 221 SICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMM 280
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+G P +++ V L ++++A LL ++M + P+ +Y +I C A G +
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA-GLI 339
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+ + L + M G + Y+ L+ Y + V I H MV R
Sbjct: 340 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 113/278 (40%), Gaps = 9/278 (3%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
V+T +R C ++ + D +P+ + YN ++ G+++ + EM
Sbjct: 9 VATLRASLRRTCSHAAGDSEDPLKD-FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMS 67
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G + T + LC GR +A ++ + FK + M+ GL FD
Sbjct: 68 ESGFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFD 124
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ +L + + P+V +Y +++GF K + ++ M G P FN++
Sbjct: 125 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLV 184
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC-MAKGRMQDVEDLVDR----M 428
+ A LL +M C P +V YN I +C K D+ DL ++ M
Sbjct: 185 HSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM 244
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + L+ + + C G + Q+ EM+ K
Sbjct: 245 LAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 282
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 177/338 (52%), Gaps = 21/338 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI ++ G ++ A + F + + + + +Y +L+ ++ + A + FH++V
Sbjct: 264 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 323
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF-------------------DVMTVKPNLLAY 229
P DV TY ++ G CK G I A +V+ D T+ PN++ Y
Sbjct: 324 CRPNDV-TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 382
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+++G CK +++ A + ++ M++ GC PN + Y+A+I G C G++D A+ + +M
Sbjct: 383 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G+ +V T+ S++ + G+ D A+ L +++ + P+V +Y +I+G C+IG+S++
Sbjct: 443 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 502
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A+ LL M +G P V ++ A+ L + G++D ++ L QM + C PN+V+Y +I
Sbjct: 503 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 562
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LC A G + L+ M ++ Y C ++G+
Sbjct: 563 HLC-AAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 599
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 158/320 (49%), Gaps = 19/320 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++L+ + I A+E F Q+ K +P V TYT++I K G ++ A KV M
Sbjct: 417 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLP-SVHTYTSLIDRMFKDGRLDLAMKVLSQM 475
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN++ Y MI+G C+ GE E+A K ++ M +GC PN +TY A+I GL G++
Sbjct: 476 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 535
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D + L +M G N T++ ++ LC G D+A L + + ++ Y
Sbjct: 536 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 595
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I GF K ++ +L+EM + G P + + + G L+ A+ L K+M +
Sbjct: 596 IQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME--- 650
Query: 398 LPNFVS-----YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+P+ V Y ++I LC+A ++++ L M R G + +++ CL+KG E
Sbjct: 651 VPSSVKTDNDMYASLIQALCLAS-QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKK 709
Query: 453 VENVMQ----IAHEMVTKKG 468
+ +Q I HE V +G
Sbjct: 710 WDEALQLCYGICHEGVNWQG 729
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 172/412 (41%), Gaps = 97/412 (23%)
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---P 224
L+ + A F H++ + N P+V TY T++ G+ K + K++ ++M + P
Sbjct: 52 LMEASYFDEAMSFLHRM-RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNP 110
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI---------------- 268
N +N++++ +C + + A K +N M GC P + YN I
Sbjct: 111 NPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLD 170
Query: 269 -----YG--------------------LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
YG LC G+ D+A L+ +M GF + ST+ ++
Sbjct: 171 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 230
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC K ++A + + + PDV +Y ++I+ FCK G ++A L +EMR+ G
Sbjct: 231 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 290
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG------- 416
PTV ++ A+ ++ ++ +A + +M C PN V+Y ++ GLC A
Sbjct: 291 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 350
Query: 417 -------------------------------------------RMQDVEDLVDRMIRSGH 433
++ +L+D M+ SG
Sbjct: 351 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 410
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALL 485
+ +Y L+ G+C+ G +++ ++ +M TK G L + + T ++D +
Sbjct: 411 EPNHIVYDALIDGFCKAGKIDSAQEVFLQM-TKCGYLPSVHTY-TSLIDRMF 460
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 113/318 (35%), Gaps = 42/318 (13%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
D T CK G +A + + K + + MI+G + +EA ++ M
Sbjct: 9 DRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM 68
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
C PN +TY ++ G ++ K ++ M G N S S++ C +
Sbjct: 69 RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDY 128
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVING-------------------------------- 340
A L + P Y + I
Sbjct: 129 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 188
Query: 341 ---------FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
C +GK D+A L+KEM +G P +++ V L ++++A LL ++
Sbjct: 189 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 248
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + P+ +Y +I C A G ++ + L + M G + Y+ L+ Y +
Sbjct: 249 MKMVGVTPDVYTYTILIDSFCKA-GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK 307
Query: 452 NVENVMQIAHEMVTKKGR 469
V I H MV R
Sbjct: 308 QVPQANDIFHRMVDAGCR 325
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 165/316 (52%), Gaps = 9/316 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIEN---AKKV 216
S+N ++ L +V + A + + K V P+V TY T+I GYCKMG I A +
Sbjct: 157 SFNIVVNGLCKVGKLNRAGDVIEDM-KVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAI 215
Query: 217 FDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
M K PN + YN +I+GFCK + A + EM +G RPN +TYN +I GLC
Sbjct: 216 LKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCS 275
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+G+VDEA L +M + + NV TH ++ G C ++A+ ++ + ++P+ +
Sbjct: 276 DGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMT 335
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I+ +CK G+ ++A +L M RG+ P V ++N + L G++ A L+ +M
Sbjct: 336 YTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMV 395
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ V+YN +I LC KG + L+D M G N Y+ L+ GYC EGN+
Sbjct: 396 SKKLSADVVTYNILIDSLC-KKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNL 454
Query: 454 ENVMQIAHEMVTKKGR 469
+ + M +KG+
Sbjct: 455 RAALIVRTRM-ERKGK 469
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 159/300 (53%), Gaps = 5/300 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ + ++ A F ++ ++ + P+V TY +I G C G ++ A + D
Sbjct: 230 TYNILIDGFCKDENVSGAMRVFGEMQRQGL-RPNVVTYNILINGLCSDGKVDEAVALRDQ 288
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++PN++ +N +INGFCK + EA N+M +G PN +TY +I C +GR
Sbjct: 289 MVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGR 348
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+++A L M G VST+ ++ GLC G A + ++ ++ DV +Y +
Sbjct: 349 MEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNI 408
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ CK G+S +A+ LL EM +GL P+ ++N + G L A+++ +M +
Sbjct: 409 LIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKG 468
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
N V++N +I G C+ KGR++D L++ M+ G + T Y + + E+G V ++
Sbjct: 469 KQANVVTHNVLIKGFCL-KGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPDI 527
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 132/249 (53%), Gaps = 4/249 (1%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD--- 278
++ N++++N ++NG CK G+L A + +M G PN +TYN +I G C GR+
Sbjct: 151 IELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMY 210
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A ++ +M G N T+ ++ G C A+ + + P+V +Y ++I
Sbjct: 211 KADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILI 270
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG C GK DEA++L +M + L+P V + N + +N ++ AI L M +
Sbjct: 271 NGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVD 330
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
PN ++Y T+I C GRM+D L + MI G + + Y+CL+ G C +G+V+
Sbjct: 331 PNAMTYTTLIDAYC-KDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARS 389
Query: 459 IAHEMVTKK 467
+ +EMV+KK
Sbjct: 390 LMNEMVSKK 398
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI +G+VKAA ++ + A + +YN L+ L + + A + ++ ++
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKG 433
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+ P V TY T++ GYC+ G + A V M K N++ +N +I GFC KG LE+A
Sbjct: 434 LNPSHV-TYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDA 492
Query: 246 KKCMNEMMNRGCRPNELTY 264
+NEM+ RG PN TY
Sbjct: 493 NGLLNEMLERGLVPNRTTY 511
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 180/348 (51%), Gaps = 40/348 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+Y+S++ +L + + E+ +++K V P V YTT+I G+CK+G + A K+F
Sbjct: 180 LYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHV-IYTTLIDGFCKLGNTQAAYKLF 238
Query: 218 DVMTVK--------------------------------------PNLLAYNTMINGFCKK 239
M + P+ + Y +I+G+CK
Sbjct: 239 SEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKL 298
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
GE+++A N+M+ G PN +TY A+ GLC +G +D A L+ +M G + N+ST+
Sbjct: 299 GEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTY 358
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ GLC G QAV + + EA ++PD +Y +++ + K G+ +A LL+EM
Sbjct: 359 NTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLD 418
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RGL+PTV +FN + L +G+L+ LLK M + +PN +YN+I+ C+ + M+
Sbjct: 419 RGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCI-RNNMR 477
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
++ M G D Y+ L+KG+C+ N++ + EMV K+
Sbjct: 478 ISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKR 525
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 162/310 (52%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN L+ L R+ I+ A ++ + +P DV +YTT+I GYC +G ++ ++
Sbjct: 112 SYNILMNSLFRLGKIREAHHLLMRMEFKGCIP-DVVSYTTIIDGYCHVGELQKVVQLVKE 170
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +K PNL Y+++I CK G++ E +K + EMM RG P+ + Y +I G C G
Sbjct: 171 MQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN 230
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
A L ++M + +++ GL GK +A +++ PD +Y
Sbjct: 231 TQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTA 290
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+CK+G+ +A L +M GL P V ++ A+ L ++GELD A LL +M +
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG 350
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
N +YNTI+ GLC A +Q V+ L++ M +G + D Y+ L+ Y + G +
Sbjct: 351 LQLNISTYNTIVNGLCKAGNILQAVK-LMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKA 409
Query: 457 MQIAHEMVTK 466
++ EM+ +
Sbjct: 410 RELLREMLDR 419
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 156/307 (50%), Gaps = 5/307 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y G +K A F +Q QI + +Y +L L + + A E H++ +
Sbjct: 289 TALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCR 348
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + ++STY T++ G CK G I A K+ + M + P+ + Y T+++ + K GE+
Sbjct: 349 KGL-QLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMV 407
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A++ + EM++RG +P +T+N ++ GLC++G++++ + L+ M G N +T+ S++
Sbjct: 408 KARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIM 467
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
K C+ + R + + PD +Y ++I G CK EA L KEM +
Sbjct: 468 KQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFN 527
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
T S+NA+ + + +L A L ++M + + + YN + + +G M+ +
Sbjct: 528 LTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFV-DMNYEEGNMETTLE 586
Query: 424 LVDRMIR 430
L D I
Sbjct: 587 LCDEAIE 593
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 166/377 (44%), Gaps = 57/377 (15%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
F+ +LI Y D G+ F Q VLV + A +FF ++
Sbjct: 24 FVERLIYTYKDWGSDPHVFDVFFQ------------------VLVEAGLLNEARKFFDKL 65
Query: 185 VKENVV--PPDVSTYTTMIRGYCKM-GMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGE 241
+ V + Y T + M GM+ F + V N +YN ++N + G+
Sbjct: 66 LNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGK 125
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ EA + M +GC P+ ++Y +I G C G + + L+ +M+L G K N+ T+ S
Sbjct: 126 IREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSS 185
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ LC GK + LR +M+ + PD Y +I+GFCK+G + A L EM AR
Sbjct: 186 IILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEARE 245
Query: 362 LKPTVFSFNAV-------------------------------FRILVEN----GELDRAI 386
+ P +F+A+ + L++ GE+ +A
Sbjct: 246 IVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAF 305
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L QM Q+ PN V+Y + GLC + G + +L+ M R G L+ + Y+ ++ G
Sbjct: 306 FLHNQMVQIGLTPNVVTYTALADGLCKS-GELDTANELLHEMCRKGLQLNISTYNTIVNG 364
Query: 447 YCEEGNVENVMQIAHEM 463
C+ GN+ +++ EM
Sbjct: 365 LCKAGNILQAVKLMEEM 381
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 206/407 (50%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++S A SL++ +
Sbjct: 3 SPANSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + ++ + + +L L+++ KL
Sbjct: 63 RSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++YNT++NG+
Sbjct: 123 FYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ G+L+E + + M+ G +P+ TY+ +I GLC ++D+A L +M + G N
Sbjct: 182 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+LD A K+M Q + + V+Y + GLC +G
Sbjct: 302 MSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 407
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 155/284 (54%), Gaps = 6/284 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F + + SYN+L+ +R+ L E F
Sbjct: 137 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD--LDEGFRLK 194
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK +++A ++FD M VK PN + + T+I+G CK
Sbjct: 195 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 254
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M + G K + T+
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITY 314
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G D A + + +++ N+ D +Y + +G C+ G+S +A +L+EM +
Sbjct: 315 TTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLS 374
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GLKP ++ + + G++ + LLK+M + +P+ V+
Sbjct: 375 VGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 204/430 (47%), Gaps = 58/430 (13%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLS----DFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ + L IS A L + KL L+K GN+ A+ HQ
Sbjct: 385 YSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIAL-QLHQEM 443
Query: 151 QIENG-------ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
+ G L SY+ ++ L + A E F ++ + ++P DV +YTT+I G
Sbjct: 444 LNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMP-DVISYTTLIHG 502
Query: 204 YCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
+C G E AK +F+ M ++P++ + +I+ CKKG++ EA K + ++ RGC +
Sbjct: 503 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILD 562
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+T ++ GLC+ R+ +A L KM+ G NV T +++KGLC G A+ +
Sbjct: 563 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 622
Query: 321 NVME------ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS------ 368
N++ N P+ SY ++I+G CK G+ DEA L KEM+A G+ P V S
Sbjct: 623 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIH 682
Query: 369 -----------------------------FNAVFRILVENGELDRAILLLKQMPQMDCLP 399
F+ + +L + G++ A LL+ M Q C+P
Sbjct: 683 GFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 742
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
N V+Y T++ GLCM R+ + L +M + G D Y L+KG C+ GN++ +++
Sbjct: 743 NTVTYTTLVKGLCM-NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 801
Query: 460 AHEMVTKKGR 469
+M++ G+
Sbjct: 802 HKKMLSDTGQ 811
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 176/341 (51%), Gaps = 27/341 (7%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDF----FISKLIKAYGDRGNVKAAIFWFHQA 149
C T + + + H IS A L KL + L+K GN+K A+ H
Sbjct: 566 CTTLVKGLCMKHR-ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIAL-ELH-- 621
Query: 150 KQIENGACLY---------SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
K + + Y SY+ ++ L + A E F ++ V+P DV +YT++
Sbjct: 622 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP-DVISYTSL 680
Query: 201 IRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I G+C+ G ++AK +F+ M V+P++ ++ +I+ CK+G++ EA + + M+ RGC
Sbjct: 681 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGC 740
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
PN +TY ++ GLC+N R+ EA L KM+ G +V T+ +++KGLC G A+
Sbjct: 741 IPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALE 800
Query: 318 YLRNVME------ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
+ ++ N PDV SY ++I+G CK G+ DEA L KEM+A G+ P V S+ +
Sbjct: 801 LHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTS 860
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+ +G+L+ A L +M N V+Y+ +I G C
Sbjct: 861 LIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFC 901
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 182/345 (52%), Gaps = 15/345 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+K + + A F + +++ + + +L+ L + +IK+A E ++
Sbjct: 567 TTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 626
Query: 187 ENV-----VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCK 238
+ P+ +Y+ +I G CK G + A+++F M V P++++Y ++I+GFC+
Sbjct: 627 DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR 686
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G+ ++AK NEM++ G +P+ T++ +I LC G+V EA L+ M G N T
Sbjct: 687 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 746
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++KGLC+ + +A + + PDV +Y ++ G C+ G A+ L K+M
Sbjct: 747 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 806
Query: 359 A------RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+ KP V S++ + L ++G D A L K+M + +PN +SY ++I G C
Sbjct: 807 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 866
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ G+++D + L + M+ G L+ YS ++ G+C+EG ++ +
Sbjct: 867 RS-GKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 197/403 (48%), Gaps = 29/403 (7%)
Query: 95 YTAITDVLLSHSLISIAASLLK--NSNKLSDFFI-----------SKLIKAYGDRGNVKA 141
Y+ DV S LI I K +N+L + I S LIK +
Sbjct: 48 YSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 107
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN-----VVPPDVST 196
A + F +++ +Y +L+ L + +I +A + +++ + P + +
Sbjct: 108 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 167
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y+ +I G CK + A+++F M + P++++Y ++I+GFC G+ E+AK NEM+
Sbjct: 168 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEML 227
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+ G +P+ T +I C G+V EA L+ M G ++ T+ +++KGLC+ +
Sbjct: 228 DVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRIS 287
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM-------RARGLKPTV 366
+A ++ + PD +Y ++ G C+ GK + A+ L +EM + ++P V
Sbjct: 288 EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDV 347
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+ + + IL + G++ A LL+ M Q C+ + V+Y+T+I GLCM R+ + L
Sbjct: 348 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEH-RISEATWLFM 406
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
M + G D Y L+KG C+ GN+ +Q+ EM+ GR
Sbjct: 407 SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGR 449
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 214/491 (43%), Gaps = 83/491 (16%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLS----DFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ + L IS A L + KL L+K GN+ A+ HQ
Sbjct: 92 YSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIAL-QLHQEM 150
Query: 151 QIENG-------ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
+ G L SY+ ++ L + A E F ++ + ++P DV +YT++I G
Sbjct: 151 LNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMP-DVISYTSLIHG 209
Query: 204 YCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
+C G E AK +F+ M ++P++ +I+ FCK+G++ EA + + M++RGC +
Sbjct: 210 FCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILD 269
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+TY+ +I GLC+ R+ EA L M+ G + + + +++KGLC GK + A+ +
Sbjct: 270 IVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQ 329
Query: 321 NVMEAN-------MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL----------- 362
++ + PDV + ++I+ CK GK EA LL+ M RG
Sbjct: 330 EMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLI 389
Query: 363 ------------------------KPTVFSFNAVFRILVENGELDRAILLLKQMPQ---- 394
+P ++ + + L + G ++ A+ L ++M
Sbjct: 390 KGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGR 449
Query: 395 --MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ C P +SY+ II GLC + R + +L + M G D Y+ L+ G+C G
Sbjct: 450 YGIKCKPTLISYSIIIDGLCKDR-REDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGK 508
Query: 453 VENVMQIAHE------------------MVTKKGRLLKLKNFLTRVVDALLLMWIVTGGS 494
E + +E M+ KKG++++ L V+ ++ +VT +
Sbjct: 509 WEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTT 568
Query: 495 WISRFVFVHQV 505
+ H++
Sbjct: 569 LVKGLCMKHRI 579
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 174/352 (49%), Gaps = 17/352 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI + G + A F++ + + + + L+ +L + + A + +++
Sbjct: 497 TTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQ 556
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ DV T TT+++G C I A ++F M PN++ T++ G C+ G ++
Sbjct: 557 RGCIL-DVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIK 615
Query: 244 EAKKCMNEMMNR------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
A + M++ C+PN ++Y+ +I GLC GR DEA+ L +M+ G +V
Sbjct: 616 IALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVI 675
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
++ S++ G C GK+ A +++ + PDV ++ V+I+ CK GK EA LL+ M
Sbjct: 676 SYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVM 735
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
RG P ++ + + L N + A L +M ++ CLP+ V+Y T++ GLC G
Sbjct: 736 IQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQT-GN 794
Query: 418 MQDVEDLVDRMI----RSGHNL--DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ +L +M+ + G N D YS ++ G C+ G + ++ EM
Sbjct: 795 IKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM 846
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 164/322 (50%), Gaps = 18/322 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE------ 211
+ +Y++L+ L + I A + F + K PD Y T+++G C+ G I
Sbjct: 270 IVTYSTLIKGLCMKHRISEATQLFMSMKKLGC-RPDAIAYGTLMKGLCQTGKINIALHLH 328
Query: 212 ----NAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
N + + ++P++ + +I+ CK+G++ EA + + M+ RGC + +TY+ +
Sbjct: 329 QEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 388
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN- 326
I GLC+ R+ EA L M+ G + + T+ +++KGLC G + A+ + ++
Sbjct: 389 IKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 448
Query: 327 -----MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
P + SY ++I+G CK + DEA L +EM+A+G+ P V S+ + +G+
Sbjct: 449 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGK 508
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
++A L +M + P+ + + +I LC KG++ + L++ +I+ G LD +
Sbjct: 509 WEKAKCLFNEMLDVGIQPDVTTSSVLIDMLC-KKGKVIEANKLLEVVIQRGCILDVVTCT 567
Query: 442 CLLKGYCEEGNVENVMQIAHEM 463
L+KG C + + Q+ +M
Sbjct: 568 TLVKGLCMKHRISKATQLFLKM 589
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 172/349 (49%), Gaps = 20/349 (5%)
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-- 221
L+ +L + + A E +++ + D+ TY+T+I+G C I A +F M
Sbjct: 60 LIDILCKEGKVIEANELLEVMIQRGCIL-DIVTYSTLIKGLCMEHRISEATWLFMSMQKL 118
Query: 222 -VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG------CRPNELTYNAMIYGLCIN 274
+P+ + Y T++ G C+ G + A + EM+N C+P ++Y+ +I GLC +
Sbjct: 119 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 178
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R DEA+ L +M+ G +V ++ S++ G C GK+++A +++ + PDV +
Sbjct: 179 RREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTS 238
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+I+ FCK GK EA LL+ M RG + +++ + + L + A L M +
Sbjct: 239 GVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKK 298
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL-------DFTMYSCLLKGY 447
+ C P+ ++Y T++ GLC G++ L M+ D T S L+
Sbjct: 299 LGCRPDAIAYGTLMKGLCQT-GKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDIL 357
Query: 448 CEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWI 496
C+EG V ++ M+ ++G +L + + T ++ L + ++ +W+
Sbjct: 358 CKEGKVIEANELLEVMI-QRGCILDIVTYST-LIKGLCMEHRISEATWL 404
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 147/290 (50%), Gaps = 19/290 (6%)
Query: 192 PDVSTYTTMI----------RGYCKMGMIENAKKVFDVMT--VKPNLLAYNTMINGFCKK 239
PD T+ +I G M I + D++T ++P++ + +I+ CK+
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G++ EA + + M+ RGC + +TY+ +I GLC+ R+ EA L M+ G + + T+
Sbjct: 68 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEAN------MNPDVKSYEVVINGFCKIGKSDEAISL 353
+++KGLC G + A+ + ++ P + SY ++I+G CK + DEA L
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 187
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
KEM+A+G+ P V S+ ++ +G+ ++A L +M + P+ + +I C
Sbjct: 188 FKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFC- 246
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+G++ + +L++ M+ G LD YS L+KG C + + Q+ M
Sbjct: 247 KEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSM 296
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 163/351 (46%), Gaps = 52/351 (14%)
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-- 221
L+ +L + + A E +++ + D+ TY+T+I+G C I A +F M
Sbjct: 353 LIDILCKEGKVIEANELLEVMIQRGCIL-DIVTYSTLIKGLCMEHRISEATWLFMSMQKL 411
Query: 222 -VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG------CRPNELTYNAMIYGLCIN 274
+P+ + Y T++ G C+ G + A + EM+N C+P ++Y+ +I GLC +
Sbjct: 412 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 471
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R DEA+ L +M+ G +V ++ +++ G C+ GK+++A +++ + PDV +
Sbjct: 472 RREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTS 531
Query: 335 EVVINGFCKIGKSDEAISLLK-----------------------------------EMRA 359
V+I+ CK GK EA LL+ +M+
Sbjct: 532 SVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQK 591
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ------MDCLPNFVSYNTIICGLCM 413
G P V + + + L ++G + A+ L K M ++C PN +SY+ II GLC
Sbjct: 592 LGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK 651
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
GR + +L M G D Y+ L+ G+C G ++ + +EMV
Sbjct: 652 C-GREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 701
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 98/176 (55%), Gaps = 13/176 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ L + I A + F ++ K +P DV TY T+++G C+ G I+ A ++
Sbjct: 746 TYTTLVKGLCMNDRISEATQLFMKMQKLGCLP-DVVTYGTLMKGLCQTGNIKTALELHKK 804
Query: 220 M---------TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
M KP++++Y+ +I+G CK G +EA++ EM G PN ++Y ++I+G
Sbjct: 805 MLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHG 864
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
C +G++++AK L +M G + N T+ M+ G C G+ D+A L MEAN
Sbjct: 865 FCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA---LFQKMEAN 917
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG---------LKPTVFSFNAVFRI 375
A + PD ++ ++IN C + + +E ++ + + RG ++P V + + + I
Sbjct: 4 AGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDI 63
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L + G++ A LL+ M Q C+ + V+Y+T+I GLCM R+ + L M + G
Sbjct: 64 LCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEH-RISEATWLFMSMQKLGCRP 122
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
D Y L+KG C+ GN+ +Q+ EM+ GR
Sbjct: 123 DAITYGTLMKGLCQTGNINIALQLHQEMLNDTGR 156
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 165/311 (53%), Gaps = 5/311 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ ++ A + ++ + + P+ TY T+I G+CK+G ++ A KVFD
Sbjct: 516 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 575
Query: 220 M----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M VKP + YN +I G+C +G+L+ A + M+ RG TYN +++ L ++G
Sbjct: 576 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 635
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R EA L+ +M G +V T+ ++ G C G +A+ N+ + V +Y
Sbjct: 636 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 695
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I K G+ E L E RG++P + +NA+ +G +DRA ++ +M +
Sbjct: 696 ALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 755
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ V+YNT++ GLC+ GR+ + L+D M G D Y+ L+ GY +G+V++
Sbjct: 756 RIAPDDVTYNTLMRGLCLL-GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 814
Query: 456 VMQIAHEMVTK 466
++I +EM+ K
Sbjct: 815 ALRIRNEMMNK 825
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 166/317 (52%), Gaps = 8/317 (2%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRV 171
L K K + LI Y D+G + A+ + + + +E G + +YN L+ L
Sbjct: 577 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLY--RDRMVERGVAMTVATYNLLVHALFMD 634
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
A E ++ + + P DV TY +I G+CK G ++ A ++F+ M+ V+ ++
Sbjct: 635 GRGTEAYELVEEMGGKGLAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 693
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y +I KKG+++E K +E + RG RP+ + YNA+I +G +D A +M +M
Sbjct: 694 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 753
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ T+ ++++GLC++G+ D+A + + E + PD+ +Y +I+G+ G
Sbjct: 754 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 813
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A+ + EM +G PT+ ++NA+ + L +NG+ D A ++K+M + P+ +Y ++I
Sbjct: 814 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 873
Query: 409 CGLCMAKGRMQDVEDLV 425
GL R D E L
Sbjct: 874 EGLTTEDERAIDDERLA 890
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 141/276 (51%), Gaps = 4/276 (1%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+T+ M+R C G A ++ M +PN + YNT+I GFC +G ++ A M EM
Sbjct: 483 TTTFNIMLRHLCSAGKPARALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMR 541
Query: 254 NR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGK 311
R G PN+ TY +I G C GRVDEA + +M G K + +++ G C GK
Sbjct: 542 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 601
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A+ Y ++E + V +Y ++++ G+ EA L++EM +GL P VF++N
Sbjct: 602 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 661
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ + G + +A+ + + M + V+Y +I L KG++Q+ + L D +R
Sbjct: 662 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS-KKGQVQETDKLFDEAVRR 720
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G D +Y+ L+ + GN++ +I EM K+
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 756
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
S A +L +M L +FN + R L G+ RA+ LL+QMP+ PN V+YNT
Sbjct: 464 SAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNT 519
Query: 407 IICGLCMAKGRMQDVEDLVDRMI-RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+I G C ++GR+Q D++ M R G + Y ++ G+C+ G V+ +++ EM+T
Sbjct: 520 VIAGFC-SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 578
Query: 466 K 466
K
Sbjct: 579 K 579
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 177/342 (51%), Gaps = 4/342 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +++ Y + G++ A+ Q + S N ++ + ++ A F ++
Sbjct: 228 TTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSN 287
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
++ PD T+ T++ G CK G +++A ++ DVM + P++ YN++I+G CK GE++
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +++M+ R C PN +TYN +I LC +V+EA L + G +V T S++
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+GLC+ A+ + PD +Y ++I+ C GK DEA+++LK+M G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+V ++N + + + A + +M N V+YNT+I GLC ++ R++D
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR-RVEDAAQ 526
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
L+D+MI G D Y+ LL +C G+++ I M +
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 175/346 (50%), Gaps = 5/346 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + L+ G+VK AI Q +Y+YNS++ L ++ +K A E Q
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
++ + P V TY T+I CK +E A ++ V+T K P++ +N++I G C
Sbjct: 356 MITRDCSPNTV-TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
A + EM ++GC P+E TYN +I LC G++DEA ++ +M L+G +V T+
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G C K +A + ++ + +Y +I+G CK + ++A L+ +M
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G KP +++N++ G++ +A +++ M C P+ V+Y T+I GLC A GR++
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA-GRVEV 593
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+ + G NL Y+ +++G + + + EM+ +
Sbjct: 594 ASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 176/344 (51%), Gaps = 41/344 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ L R + ++ A + +VP D T+TT+++GY + G ++ A ++ +
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVP-DEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR-GCRPNELTYNAMIYGLCING 275
M + ++ N +++GFCK+G +E+A + EM N+ G P++ T+N ++ GLC G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
V A +M M G+ +V T+ S++ GLC +G+ +AV L ++ + +P+ +Y
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 336 VVINGFCKIGKSDE-----------------------------------AISLLKEMRAR 360
+I+ CK + +E A+ L +EMR++
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G +P F++N + L G+LD A+ +LKQM C + ++YNT+I G C A + ++
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN-KTRE 488
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
E++ D M G + + Y+ L+ G C+ VE+ Q+ +M+
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 161/307 (52%), Gaps = 6/307 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN +L +LV NS+KL E H + + PDVST+ +I+ C+ + A + + M
Sbjct: 157 YNRMLNLLVDGNSLKLVE-ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM 215
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+ + T++ G+ ++G+L+ A + +M+ GC + ++ N +++G C GRV
Sbjct: 216 PSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRV 275
Query: 278 DEAKMLMAKMR-LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++A + +M +GF + T +++ GLC G A+ + +++ +PDV +Y
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G CK+G+ EA+ +L +M R P ++N + L + +++ A L + +
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
LP+ ++N++I GLC+ + +E L + M G D Y+ L+ C +G ++
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAME-LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 457 MQIAHEM 463
+ + +M
Sbjct: 455 LNMLKQM 461
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 168/332 (50%), Gaps = 17/332 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++NSL+ L + ++A E F ++ + PD TY +I C G ++ A +
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + +++ YNT+I+GFCK + EA++ +EM G N +TYN +I GLC + R
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++A LM +M + G K + T+ S+L C G +A ++ + PD+ +Y
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM-PQM 395
+I+G CK G+ + A LL+ ++ +G+ T ++N V + L + AI L ++M Q
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ P+ VSY + GLC G +++ D + ++ G +F+ L +G E
Sbjct: 641 EAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET 700
Query: 456 VMQIAHEMVTKKGR-----------LLKLKNF 476
++++ + MV +K R LLK++ F
Sbjct: 701 LVKLVN-MVMQKARFSEEEVSMVKGLLKIRKF 731
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 128/255 (50%), Gaps = 12/255 (4%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS---YNSLLGVLVRVNSIKLAEE 179
+F + LI + +G + A+ + KQ+E C S YN+L+ + N + AEE
Sbjct: 435 EFTYNMLIDSLCSKGKLDEAL---NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGF 236
F ++ V V TY T+I G CK +E+A ++ D M + KP+ YN+++ F
Sbjct: 492 IFDEMEVHGVSRNSV-TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C+ G++++A + M + GC P+ +TY +I GLC GRV+ A L+ +++ G
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP 610
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEAN-MNPDVKSYEVVINGFCKIGKS-DEAISLL 354
+ +++GL K +A+ R ++E N PD SY +V G C G EA+ L
Sbjct: 611 HAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFL 670
Query: 355 KEMRARGLKPTVFSF 369
E+ +G P S
Sbjct: 671 VELLEKGFVPEFSSL 685
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 142/288 (49%), Gaps = 7/288 (2%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGELEEAKKCM 249
ST+ +I Y + + + V D M +KP+ YN M+N L+ +
Sbjct: 118 TSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISH 177
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M G +P+ T+N +I LC ++ A +++ M G + T ++++G
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR-GLKPTVFS 368
G D A+ ++E + S V+++GFCK G+ ++A++ ++EM + G P ++
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
FN + L + G + AI ++ M Q P+ +YN++I GLC G +++ +++D+M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL-GEVKEAVEVLDQM 356
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
I + + Y+ L+ C+E VE ++A ++T KG L + F
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELAR-VLTSKGILPDVCTF 403
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 39/205 (19%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YNSLL R IK A + Q + N PD+ TY T+I G CK G +E A K+
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIV-QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 219 VMTVKP-NLL--AYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLC-I 273
+ +K NL AYN +I G +K + EA EM+ + P+ ++Y + GLC
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNG 659
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVST---------------------------------HK 300
G + EA + ++ GF S+
Sbjct: 660 GGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV 719
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEA 325
SM+KGL + KF A+ L V+++
Sbjct: 720 SMVKGLLKIRKFQDALATLGGVLDS 744
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 37/213 (17%)
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
F + ++ +L L G FD L ++ + ++ ++I + + DE +
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 352 SLLK------------------------------------EMRARGLKPTVFSFNAVFRI 375
S++ +M G+KP V +FN + +
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L +L AIL+L+ MP +P+ ++ T++ G + +G + + ++M+ G +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY-IEEGDLDGALRIREQMVEFGCSW 257
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ ++ G+C+EG VE+ + EM + G
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 205/415 (49%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y + + +H + S A SL++
Sbjct: 3 FFTWLSSPANST--FRHTLXSYCTMIHFVCTHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
N+ SD ++ S LI AY + G ++ A+ + ++ + + +L L+++
Sbjct: 61 ILETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ + + E P + + + +CK G I A+ VFD +T ++P++++
Sbjct: 121 KYFKLVWGFYEEFL-ECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L+E K + M G P+ TY+ +I GLC ++D A L +M
Sbjct: 180 YNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G +
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLN 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLKP ++ + + G+LD A K+M Q + + V+Y +I
Sbjct: 300 QAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ C++G+V ++ EM
Sbjct: 360 SGLCQ-EGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEM 413
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 174/306 (56%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++++ + + ++ A + + ++V + ++ TY+ +I G+C +G +++A +F+ M
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRI-SSNIVTYSALISGFCIVGKLKDAIGLFNKM 271
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
T + P++ +N +++ FCK+G ++EAK + MM +G +P+ +TYN+++ G C+ V
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEV 331
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+ AK ++ M G V ++ ++ G C + DQA+ + + + P+V +Y +
Sbjct: 332 NMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSL 391
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G CK G+ A+ L+ M RG +P + +++++ L +N +D+AI LL ++
Sbjct: 392 IDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGI 451
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +Y +I GLC GR++D ++ + ++ G+NL Y+ +++G+C G + +
Sbjct: 452 RPNMYTYTILIDGLCKG-GRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEAL 510
Query: 458 QIAHEM 463
+ +M
Sbjct: 511 SLLSKM 516
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 167/317 (52%), Gaps = 5/317 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + G +K AI F++ +Y++N L+ + +K A+ ++K
Sbjct: 249 SALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMK 308
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + PD+ TY +++ GYC + + AK + + M+ V + +YN +INGFCK ++
Sbjct: 309 QGI-KPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVD 367
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A K EM ++ PN +TYN++I GLC +GR+ A L+ M G + ++ T+ S+L
Sbjct: 368 QAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSIL 427
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC D+A+ L + + + P++ +Y ++I+G CK G+ ++A ++ +++ +G
Sbjct: 428 DALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYN 487
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
TV ++ + + +G D A+ LL +M C+P+ ++Y IIC L K E
Sbjct: 488 LTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSL-FDKDENDKAEK 546
Query: 424 LVDRMIRSGHNLDFTMY 440
L+ MI G F Y
Sbjct: 547 LLREMITRGLLYSFLEY 563
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 178/382 (46%), Gaps = 48/382 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A+ G VK A + + +YNSL+ VN + +A+ + +
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
V V +Y +I G+CK+ M++ A K+F M K PN++ YN++I+G CK G + A
Sbjct: 346 VTAT-VRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYA 404
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ M +RG +P+ +TY++++ LC N VD+A L+ K++ G + N+ T+ ++ G
Sbjct: 405 LELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDG 464
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ + A +++ N V +Y V+I GFC G DEA+SLL +M+ P
Sbjct: 465 LCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPD 524
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT------------------- 406
++ + L + E D+A LL++M L +F+ Y +
Sbjct: 525 AITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQ 584
Query: 407 -----------------IICGLCMAKGRMQDVEDLVDRMI--------RSGHNLDFTMYS 441
I C + K M+D + +I + G+ LD Y+
Sbjct: 585 CTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYT 644
Query: 442 CLLKGYCEEGNVENVMQIAHEM 463
+++G+C G + + + +M
Sbjct: 645 VMIQGFCSHGLFDESLALLSKM 666
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 127/300 (42%), Gaps = 54/300 (18%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P + + ++ K +M RG +PN + +N +I C G + A +
Sbjct: 68 PPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSV 127
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+AK+ G++ + T + +KG C+ G+ QA+ + ++ + D SY +ING CK
Sbjct: 128 LAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCK 187
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+G++ A+ LL+ + + + Q+D V
Sbjct: 188 VGETRAALELLRRVDGK-------------------------------LVQLDV----VM 212
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+TII +C K + D DL M+ + + YS L+ G+C G +++ + + ++M
Sbjct: 213 YSTIIDSMCKDK-NVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKM 271
Query: 464 VT------------------KKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQV 505
+ K+GR+ + KN L ++ + IVT S + + V++V
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEV 331
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 206/415 (49%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL------------------ 115
FF W S+P + + HT Y + L +H ++ A SL+
Sbjct: 3 FFTWLSSPANST--FRHTLHSYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAT 60
Query: 116 ----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
K + + + +S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 61 ILETKGTQRSDIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++
Sbjct: 121 KYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L E + + M+ G +P+ TY+ +I GLC ++D+A L +M
Sbjct: 180 YNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N T +++ G C G+ D A+ + ++ + PD+ +Y +I G K G
Sbjct: 240 VKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLKP F++ + + G+LD A K+M Q + + V+Y +I
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLC-QEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEM 413
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 203/424 (47%), Gaps = 29/424 (6%)
Query: 65 QTNPYHALFFFNWA-SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK-----NS 118
+T+P AL F WA S P + + + AI ++L ++L+ A +++ N
Sbjct: 92 RTSPRMALRLFRWAESQPG-----FRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM 146
Query: 119 NKLSDFFISK-------------LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
+++ D I LI Y + V+ + F + + + + N +L
Sbjct: 147 HRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRIL 206
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK-- 223
+L + + A E + + + E + P + TY T++ YCK G ++ + M +
Sbjct: 207 RILRDKDLMSKAVEVY-RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGC 265
Query: 224 -PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
PN + YN +ING KKGE E+AK + EM+ G + + TYN +IYG G + EA
Sbjct: 266 APNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALS 325
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M L G V+T+ S + GLC +G+ A+ L +++ N+ PDV SY +I G+C
Sbjct: 326 LQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYC 385
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
++G +A L E+R+ L PT+ ++N + L GEL+ A L +M P+ V
Sbjct: 386 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+Y ++ G C G + ++ D M+ G LD Y+ + G + G+ + E
Sbjct: 446 TYTILVNGSC-KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504
Query: 463 MVTK 466
M+ K
Sbjct: 505 MLAK 508
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 189/397 (47%), Gaps = 44/397 (11%)
Query: 110 IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGA--CLYSYNSLLGV 167
+ +LK K+S + + LI Y ++G + A+ Q + + GA + +YNS +
Sbjct: 291 LIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSL--QEEMVLKGASPTVATYNSFIYG 348
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
L ++ + A + ++ N++P DV +Y T+I GYC++G + A +FD + + P
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLP-DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
++ YNT+++G C++GELE A++ EM+N G P+ +TY ++ G C G + A+
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 467
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M G + + + + + G +G +A ++ PD+ Y VV++G CK+
Sbjct: 468 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527
Query: 345 GKSDEAISLLK-----------------------------------EMRARGLKPTVFSF 369
G +EA LL+ EM ++GL P+V ++
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTY 587
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ G L+RA + +M + LPN ++YN++I GLC + RM + M+
Sbjct: 588 TVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVR-RMDQAYNFFAEMV 646
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G + Y+ L+ C GN + + + +M+ +
Sbjct: 647 EKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR 683
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 151/318 (47%), Gaps = 39/318 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y GN+ A F + + I + +YN+LL L R +++A++ +++ E
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---------------------------- 220
+ P D+ TYT ++ G CKMG + A++ FD M
Sbjct: 440 IAP-DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRA 498
Query: 221 ----------TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
P+L+ YN +++G CK G LEEA + + +M++ G P+ +TY ++I+
Sbjct: 499 FSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHA 558
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
NGR+ + + + +M G +V T+ ++ G G+ ++A Y + E + P+
Sbjct: 559 HLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPN 618
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V +Y +ING CK+ + D+A + EM +G+ P +S+ + G A+ L K
Sbjct: 619 VITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYK 678
Query: 391 QMPQMDCLPNFVSYNTII 408
QM P+ +++ ++
Sbjct: 679 QMLDRGVQPDSCTHSALL 696
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 203/424 (47%), Gaps = 29/424 (6%)
Query: 65 QTNPYHALFFFNWA-SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK-----NS 118
+T+P AL F WA S P + + + AI ++L ++L+ A +++ N
Sbjct: 92 RTSPRMALRLFRWAESQPG-----FRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM 146
Query: 119 NKLSDFFISK-------------LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
+++ D I LI Y + V+ + F + + + + N +L
Sbjct: 147 HRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRIL 206
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK-- 223
+L + + A E + + + E + P + TY T++ YCK G ++ + M +
Sbjct: 207 RILRDKDLMSKAVEVY-RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGC 265
Query: 224 -PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
PN + YN +ING KKGE E+AK + EM+ G + + TYN +IYG G + EA
Sbjct: 266 APNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALS 325
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M L G V+T+ S + GLC +G+ A+ L +++ N+ PDV SY +I G+C
Sbjct: 326 LQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYC 385
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
++G +A L E+R+ L PT+ ++N + L GEL+ A L +M P+ V
Sbjct: 386 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+Y ++ G C G + ++ D M+ G LD Y+ + G + G+ + E
Sbjct: 446 TYTILVNGSC-KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504
Query: 463 MVTK 466
M+ K
Sbjct: 505 MLAK 508
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 189/397 (47%), Gaps = 44/397 (11%)
Query: 110 IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGA--CLYSYNSLLGV 167
+ +LK K+S + + LI Y ++G + A+ Q + + GA + +YNS +
Sbjct: 291 LIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSL--QEEMVLKGASPTVATYNSFIYG 348
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
L ++ + A + ++ N++P DV +Y T+I GYC++G + A +FD + + P
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLP-DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
++ YNT+++G C++GELE A++ EM+N G P+ +TY ++ G C G + A+
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 467
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M G + + + + + G +G +A ++ PD+ Y VV++G CK+
Sbjct: 468 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527
Query: 345 GKSDEAISLLK-----------------------------------EMRARGLKPTVFSF 369
G +EA LL+ EM ++GL P+V ++
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTY 587
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ G L+RA + +M + LPN ++YN++I GLC + RM + M+
Sbjct: 588 TVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVR-RMDQAYNFFAEMV 646
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G + Y+ L+ C GN + + + +M+ +
Sbjct: 647 EKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR 683
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 151/318 (47%), Gaps = 39/318 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y GN+ A F + + I + +YN+LL L R +++A++ +++ E
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------------------- 221
+ P D+ TYT ++ G CKMG + A++ FD M
Sbjct: 440 IAP-DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRA 498
Query: 222 -----------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
P+L+ YN +++G CK G LEEA + + +M++ G P+ +TY ++I+
Sbjct: 499 FSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHA 558
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
NGR+ + + + +M G +V T+ ++ G G+ ++A Y + E + P+
Sbjct: 559 HLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPN 618
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V +Y +ING CK+ + D+A + EM +G+ P +S+ + G A+ L K
Sbjct: 619 VITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYK 678
Query: 391 QMPQMDCLPNFVSYNTII 408
QM P+ +++ ++
Sbjct: 679 QMLDRGVQPDSCTHSALL 696
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 163/295 (55%), Gaps = 5/295 (1%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N LL L+R ++++L + ++ +PPDV TY+T + +CK + AKKVF+ M
Sbjct: 214 NGLLKDLLRADAMELVWKL-KGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMR 272
Query: 222 VKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ N + YN MI+G C+ G +EEA EM++ G P+ TY A++ GLC GR+
Sbjct: 273 RRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLK 332
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EAK L+ +M +G K NV + +++ G GK +A L ++ A + P+ Y+ +I
Sbjct: 333 EAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLI 392
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
G CKIG+ A LL EM G +P F+++ + + ++ + D A LL +M L
Sbjct: 393 RGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGIL 452
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
PN +Y +I GLC G ++ +L++ MI G + MY+ L+ G+ +EG++
Sbjct: 453 PNAYTYGIMINGLCQ-NGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHI 506
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 207/469 (44%), Gaps = 34/469 (7%)
Query: 6 RSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQ 65
R L I Q+ S L+ + V R P + PL Q ++
Sbjct: 393 RGLCKIGQLGRASKLLNEMIKVGHR-------PDTFTYHPLMQGH------------FQH 433
Query: 66 TNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN----SNKL 121
+ A N N PN Y Y + + L + A +LL+ K
Sbjct: 434 YDKDGAFELLNEMRNSGILPNAY-----TYGIMINGLCQNGESKEAGNLLEEMISEGLKP 488
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
+ F + LI + G++ A + L+ YNSL+ L V I+ AEE++
Sbjct: 489 NAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYY 548
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCK 238
Q+ K +VP D TY+ +I GYCK +E A ++ M +KPN Y ++ G+ K
Sbjct: 549 AQVQKRGLVP-DEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFK 607
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ E+ + M+ G +P+ Y +I L + ++ A M++ ++ NG ++
Sbjct: 608 SNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHI 667
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ S++ GLC + ++AVG L + + + P + Y +I+GFC+ G A ++ +
Sbjct: 668 YSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSIL 727
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
A+GL P ++ A+ +NG++ A L K M P+ YN + G C +
Sbjct: 728 AKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATG-CSDAADL 786
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ L + M G+ +++S L++G+C+ G ++ ++ H M+ ++
Sbjct: 787 EQALFLTEEMFNRGY-AHVSLFSTLVRGFCKRGRLQETEKLLHVMMDRE 834
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 147/311 (47%), Gaps = 6/311 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ ++ A + ++++ V P + Y +IRG CK+G + A K+ + M
Sbjct: 353 YATLVDGFMKEGKAAEAFDILNEMISAGVQPNKI-MYDNLIRGLCKIGQLGRASKLLNEM 411
Query: 221 TV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+P+ Y+ ++ G + + + A + +NEM N G PN TY MI GLC NG
Sbjct: 412 IKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGES 471
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L+ +M G K N + ++ G G A L N+ +AN+ PD+ Y +
Sbjct: 472 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSL 531
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I G +G+ +EA +++ RGL P F+++ + + L++A LL+QM
Sbjct: 532 IKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGL 591
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +Y ++ G + + V ++ M+ SG D +Y +++ N+E
Sbjct: 592 KPNADTYTDLLEGYFKSNDH-EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 650
Query: 458 QIAHEMVTKKG 468
+ E V K G
Sbjct: 651 MVLTE-VEKNG 660
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 4/213 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
V++N + PD+ Y+++I G CKM +E A + D M ++P ++ YN +I+GFC+ G+
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 715
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ A+ + ++ +G PN +TY A+I G C NG + +A L M G + +
Sbjct: 716 ISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNV 775
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+ G +QA+ +L M V + ++ GFCK G+ E LL M R
Sbjct: 776 LATGCSDAADLEQAL-FLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDRE 834
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ P + V + G+L A + ++ Q
Sbjct: 835 IVPNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 1/235 (0%)
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+ +++ + K G + A + + M + G P N ++ L ++ L M
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEG 238
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G +V T+ + L+ C FD A + + + +Y V+I+G C+ G +E
Sbjct: 239 AGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 298
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A +EM GL P F++ A+ L + G L A LL +M PN V Y T++
Sbjct: 299 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVD 358
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G M +G+ + D+++ MI +G + MY L++G C+ G + ++ +EM+
Sbjct: 359 GF-MKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMI 412
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 3/193 (1%)
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME-ANMNPDVK 332
NG V A ++ M G +LK L + V L+ ME A + PDV
Sbjct: 188 NGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAM-ELVWKLKGFMEGAGIPPDVY 246
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y + CK D A + +EMR R ++N + L +G ++ A ++M
Sbjct: 247 TYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 306
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
P+ +Y ++ GLC GR+++ + L+D M SG + +Y+ L+ G+ +EG
Sbjct: 307 VDYGLSPDAFTYGALMNGLCKG-GRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGK 365
Query: 453 VENVMQIAHEMVT 465
I +EM++
Sbjct: 366 AAEAFDILNEMIS 378
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTM 232
L EE F++ VS ++T++RG+CK G ++ +K+ VM + PN +
Sbjct: 792 LTEEMFNRGYAH------VSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENV 845
Query: 233 INGFCKKGELEEAKKCMNEMMNR 255
I F K G+L EA + E+ +
Sbjct: 846 ITEFGKAGKLCEAHRVFAELQQK 868
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 199/392 (50%), Gaps = 14/392 (3%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFISKL-IKAYGDRG 137
N +P+ Y Y AI ++L+ + A + +K+ SD + + IK++ G
Sbjct: 185 NCDPSVYS-----YNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTG 239
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
AA+ + + +Y +++ A E F +++ E + PDV+T+
Sbjct: 240 RPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEML-ECCLCPDVTTF 298
Query: 198 TTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
++ CK G + ++++FD + V PNL +N I G CK+G L+ A + + +
Sbjct: 299 NKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSR 358
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
G RP+ +TYN +I GLC RV EA+ + KM GF+ N T+ S++ G C G
Sbjct: 359 EGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVD 418
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A L++ + PD +Y ++NGFC+ G D+A+++ K+ +GL+P++ +N + +
Sbjct: 419 ANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIK 478
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L + G + A+ L+ +M + C P+ +YN II GLC G + D L+ I G
Sbjct: 479 GLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLC-KMGCLSDANHLIGDAITKGCI 537
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ L+ GYC + +++ +++ + M ++
Sbjct: 538 PDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQ 569
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 181/398 (45%), Gaps = 76/398 (19%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
+YN+++ L R + + AEE H++V P D TY ++I GYCK GM+ +A ++
Sbjct: 367 TYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDF-TYNSIIDGYCKKGMVVDANRILKD 425
Query: 218 --------DVMT----------------------------VKPNLLAYNTMINGFCKKGE 241
D T ++P+++ YNT+I G C++G
Sbjct: 426 AVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGL 485
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ A + MNEM +GC+P+ TYN +I GLC G + +A L+ G ++ T+ +
Sbjct: 486 ILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNT 545
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C K D A+ + + M PDV +Y ++NG CK KS+E + + K M +G
Sbjct: 546 LVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM------AK 415
P + ++N + L + +++ A+ LL +M P+ VS+ T+I G C A
Sbjct: 606 CAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAY 665
Query: 416 GRMQDVEDLVD-----------------------------RMIRSGHNLDFTMYSCLLKG 446
G + +E D M ++G + D Y L+ G
Sbjct: 666 GLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDG 725
Query: 447 YCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
+C+ GNV + E + +KG + L F RV++ L
Sbjct: 726 FCKTGNVNQGYKFLLENI-EKGFIPSLTTF-GRVLNCL 761
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 181/378 (47%), Gaps = 44/378 (11%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+KL+ A +G V + F K ++ G C L+++N + L + S+ A
Sbjct: 298 FNKLVHALCKKGFVLESERLFD--KVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGC 355
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ +E + PDV TY T+I G C+ + A++ M +PN YN++I+G+CKKG
Sbjct: 356 VSREGL-RPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKG 414
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ +A + + + + +G +P+E TY +++ G C +G D+A + G + ++ +
Sbjct: 415 MVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYN 474
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG--------------- 345
+++KGLC G A+ + + E PD+ +Y ++ING CK+G
Sbjct: 475 TLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITK 534
Query: 346 --------------------KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
K D AI L+ M ++G+ P V ++N + L + + +
Sbjct: 535 GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEV 594
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ + K M + C PN ++YNTII LC +K ++ + DL+ M G D + L+
Sbjct: 595 MEIFKAMTEKGCAPNIITYNTIIESLCNSK-KVNEAVDLLGEMKSKGLTPDVVSFGTLIT 653
Query: 446 GYCEEGNVENVMQIAHEM 463
G+C+ G+++ + M
Sbjct: 654 GFCKVGDLDGAYGLFRGM 671
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 178/380 (46%), Gaps = 10/380 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNS----NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y +I D ++ A +LK++ K +F L+ + G+ A+ F
Sbjct: 403 YNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGL 462
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ YN+L+ L + I A + +++ E PD+ TY +I G CKMG +
Sbjct: 463 GKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMA-EKGCKPDIWTYNLIINGLCKMGCL 521
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+A + K P++ YNT+++G+C++ +L+ A + +N M ++G P+ +TYN +
Sbjct: 522 SDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTL 581
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ GLC + +E + M G N+ T+ ++++ LC K ++AV L + +
Sbjct: 582 LNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR-GLKPTVFSFNAVFRILVENGELDRAI 386
PDV S+ +I GFCK+G D A L + M + + T ++N + E + A+
Sbjct: 642 TPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMAL 701
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L +M + C P+ +Y +I G C Q + L++ I G T + +L
Sbjct: 702 RLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLEN-IEKGFIPSLTTFGRVLNC 760
Query: 447 YCEEGNVENVMQIAHEMVTK 466
C E V+ + I H MV K
Sbjct: 761 LCVEHKVQEAVGIIHLMVQK 780
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 151/319 (47%), Gaps = 42/319 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIK +G + A+ ++ + +++YN ++ L ++ + A + +
Sbjct: 476 LIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKG 535
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+P D+ TY T++ GYC+ +++A ++ + M + P+++ YNT++NG CK + EE
Sbjct: 536 CIP-DIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEV 594
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M +GC PN +TYN +I LC + +V+EA L+ +M+ G +V + +++ G
Sbjct: 595 MEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITG 654
Query: 306 LCVVGKFDQAVGYLRNV-----------------------------------MEAN-MNP 329
C VG D A G R + M+ N +P
Sbjct: 655 FCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDP 714
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
D +Y V+I+GFCK G ++ L E +G P++ +F V L ++ A+ ++
Sbjct: 715 DNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGII 774
Query: 390 KQMPQMDCLPNFVSYNTII 408
M Q D +P+ V NTI
Sbjct: 775 HLMVQKDIVPDTV--NTIF 791
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 4/275 (1%)
Query: 195 STYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
Y +R Y + G I+ A F D+ P++ +YN ++N + G +A K
Sbjct: 156 GVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMR 215
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M ++ + TY I C GR A L+ M + G N + +++ G G
Sbjct: 216 MKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGD 275
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+A ++E + PDV ++ +++ CK G E+ L ++ RG+ P +F+FN
Sbjct: 276 NDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNI 335
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L + G LDRA+ LL + + P+ V+YNT+ICGLC K R+ + E+ + +M+
Sbjct: 336 FIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLC-RKSRVVEAEECLHKMVNG 394
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G + Y+ ++ GYC++G V + +I + V K
Sbjct: 395 GFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFK 429
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 108/241 (44%), Gaps = 37/241 (15%)
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN-----------------GFKD--- 294
+G + TY +M+ L +G+ +E + L+++MR N G K
Sbjct: 113 QGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQ 172
Query: 295 ----------------NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+V ++ +++ L G F+QA + + + DV +Y + I
Sbjct: 173 EAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRI 232
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
FC+ G+ A+ LL+ M G ++ V E G+ DRA L +M +
Sbjct: 233 KSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLC 292
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P+ ++N ++ LC KG + + E L D++++ G + ++ ++G C+EG+++ ++
Sbjct: 293 PDVTTFNKLVHALC-KKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351
Query: 459 I 459
+
Sbjct: 352 L 352
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 169/310 (54%), Gaps = 6/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIV-KENVVPPDVSTYTTMIRGYCKMGMIENAKKVF- 217
SYN LL L ++ AEE ++ + PD+ TY+T++ GYCK G +E ++++
Sbjct: 47 SYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLK 106
Query: 218 DVMT--VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+V++ ++P+ L Y ++ CK L EA + + EM+ GC P +T+N +I G C
Sbjct: 107 EVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREK 166
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++ A L+ M +G K +V T+ +++ GLC G+ +A L + + PDV +Y
Sbjct: 167 NLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYS 226
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+ G CK GK A +L++MR P V ++N + L ++G++D A+ +++QM
Sbjct: 227 SFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286
Query: 396 D-CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
D C N V Y+T++ GLC GR Q+ +++ M R+G D YS L+ G C+ G +E
Sbjct: 287 DGCGLNVVGYSTVVDGLCKL-GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIE 345
Query: 455 NVMQIAHEMV 464
++ EM
Sbjct: 346 EAVEAVREMA 355
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 166/313 (53%), Gaps = 13/313 (4%)
Query: 152 IENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
I G C L ++N+L+ R ++++A+ Q + + V DV TY T++ G CK G
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLL-QTMAASGVKADVVTYNTLMDGLCKAGR 202
Query: 210 IENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
++ A+++ + M P+++AY++ + G CK G++ A + + +M + PN +TYN
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNT 262
Query: 267 MIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
++ GLC +G++D A +M +M +G NV + +++ GLC +G+ +A + + A
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARA 322
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
PDV +Y ++NG CK GK +EA+ ++EM G KP ++ ++ L G L A
Sbjct: 323 GCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEA 382
Query: 386 ILLLKQMPQM-----DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
++++M C P+ +YN +I GLC A GR+ D RM G + D Y
Sbjct: 383 ERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKA-GRIDDALKFFQRMRSQGCDPDGVSY 441
Query: 441 SCLLKGYCEEGNV 453
S +++G G
Sbjct: 442 STIVEGLARSGRA 454
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 167/299 (55%), Gaps = 7/299 (2%)
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKK 247
PP+ T+ ++ G+ K G + +++ + M ++PN+++YN ++ G CK EA++
Sbjct: 7 PPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEE 66
Query: 248 CMNEMMNRGCR--PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M++RG R P+ +TY+ ++ G C G+V+E++ L+ ++ G + + + ++
Sbjct: 67 LVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMAS 126
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + +A+ L ++ A P + ++ +I+G C+ + A SLL+ M A G+K
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKAD 186
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V ++N + L + G L A LL++M C P+ V+Y++ + GLC + G++ + ++
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS-GKVLNAHQVL 245
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
++M S H+ + Y+ +L G C+ G ++ +++ +M + G L + + T VVD L
Sbjct: 246 EQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST-VVDGL 303
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 131/249 (52%), Gaps = 3/249 (1%)
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
D PN + +N ++NGF K+G + ++ + M RG +PN ++YN ++ GLC R
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 277 VDEAKMLMAKMRLNGFKD--NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
EA+ L+ M G + ++ T+ ++L G C GK +++ L+ V+ + PD Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+ CK + EA+ LL+EM G PT+ +FN + L+ A LL+ M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ V+YNT++ GLC A GR+Q+ E L++RM SG D YS + G C+ G V
Sbjct: 181 SGVKADVVTYNTLMDGLCKA-GRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239
Query: 455 NVMQIAHEM 463
N Q+ +M
Sbjct: 240 NAHQVLEQM 248
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 136/268 (50%), Gaps = 12/268 (4%)
Query: 95 YTAITDVLLSHSLISIAASLL---KNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y + D L + A LL K S D S + G V A Q +
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMR 249
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
++ + +YN++L L + I A E Q+ + +V Y+T++ G CK+G
Sbjct: 250 DSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRT 309
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ V + M +P+++ Y++++NG CK G++EEA + + EM GC+PN +TY ++
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369
Query: 268 IYGLCINGRVDEAKMLMAKMRL-----NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
++GLC GR+ EA+ ++ +M + +VST+ +++ GLC G+ D A+ + + +
Sbjct: 370 VHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRM 429
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEA 350
+PD SY ++ G + G++ +A
Sbjct: 430 RSQGCDPDGVSYSTIVEGLARSGRALQA 457
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 169/307 (55%), Gaps = 5/307 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+ +L+ L + + +A + +++ V PDV TYT ++ G+C ++ A KVFD M
Sbjct: 287 FTTLVDALCKEGMVTIAHDVVDVMIQRGV-EPDVVTYTALMDGHCLRSEMDEADKVFDTM 345
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K PN+++Y+T+ING+CK +++A EM R PN +TYN +I+GLC GR+
Sbjct: 346 VRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRL 405
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A L +M +G ++ T++ +L LC DQA+ L+ + +N+ PD++SY +V
Sbjct: 406 RDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIV 465
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G C++G+ + A L + ++GL P V+++ + L G L A L ++M C
Sbjct: 466 IDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGC 525
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ +YN I G + ++ L+ M+ G + D + + +++ ++G ++V
Sbjct: 526 SPDDCTYNLITRGFLRNNETLSAIQ-LLQEMLGRGFSADASTITLIVEMLSDDGLDQSVK 584
Query: 458 QIAHEMV 464
QI HE V
Sbjct: 585 QILHEFV 591
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 173/340 (50%), Gaps = 5/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI GN +AAI Q + +YN+++ L + + A F +++ +
Sbjct: 185 LIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKG 244
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P+VSTY ++I G CK ++ + + M + PN++ + T+++ CK+G + A
Sbjct: 245 I-SPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIA 303
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ M+ RG P+ +TY A++ G C+ +DEA + M G NV ++ +++ G
Sbjct: 304 HDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLING 363
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C + + D+A+ + + + P++ +Y +I+G C +G+ +AI+L EM A G P
Sbjct: 364 YCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPD 423
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ ++ + L + LD+A+ +LK + + P+ SYN +I G+C G ++ DL
Sbjct: 424 LVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRV-GELEAAGDLF 482
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ G + D Y+ ++ G C +G + ++ EM T
Sbjct: 483 SSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNT 522
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 151/306 (49%), Gaps = 39/306 (12%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PD +T+TT+IRG C G I A +FD M +PN + Y T+I+G CK G A +
Sbjct: 142 PDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRL 201
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M+ + C PN +TYN +I L + +V+EA + ++M G NVST+ S++ GLC
Sbjct: 202 LRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCK 261
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
++ + ++++ + P+V + +++ CK G A ++ M RG++P V +
Sbjct: 262 FSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVT 321
Query: 369 FNA----------------VFRILVENG-------------------ELDRAILLLKQMP 393
+ A VF +V G +D+A+ L ++M
Sbjct: 322 YTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMC 381
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
Q + +PN V+YNT+I GLC GR++D L M+ SG D Y LL C+ ++
Sbjct: 382 QRELVPNIVTYNTLIHGLCHV-GRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHL 440
Query: 454 ENVMQI 459
+ M +
Sbjct: 441 DQAMAM 446
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 140/279 (50%), Gaps = 4/279 (1%)
Query: 191 PPDVSTYTTMIRGYCKM---GMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK 247
PP V + ++ M + + K D + + ++ +IN FC ++
Sbjct: 71 PPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFS 130
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ ++ G +P+ T+ +I GLC+ G++ EA L KM GF+ N T+ +++ GLC
Sbjct: 131 VLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLC 190
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
VG A+ LR++++ N P+V +Y +I+ K + +EA+++ EM A+G+ P V
Sbjct: 191 KVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVS 250
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++N++ L + E L+ +M +PN V + T++ LC +G + D+VD
Sbjct: 251 TYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALC-KEGMVTIAHDVVDV 309
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI+ G D Y+ L+ G+C ++ ++ MV K
Sbjct: 310 MIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRK 348
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 40/263 (15%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI Y + A++ F + Q E + +YN+L+ L V ++ A FH++V
Sbjct: 358 STLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVA 417
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAK---KVFDVMTVKPNLLAYNTMINGFCKKGELE 243
+ PD+ TY ++ CK ++ A K + + P++ +YN +I+G C+ GELE
Sbjct: 418 SGQI-PDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELE 476
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + + ++G P+ TY MI GLC+ G + EA L +M +G
Sbjct: 477 AAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDG------------ 524
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+PD +Y ++ GF + ++ AI LL+EM RG
Sbjct: 525 -----------------------CSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFS 561
Query: 364 PTVFSFNAVFRILVENGELDRAI 386
+ + +L ++G LD+++
Sbjct: 562 ADASTITLIVEMLSDDG-LDQSV 583
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 201/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A SL++ +
Sbjct: 3 SPTNSTFRHTLHSYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ A+ F +++ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + ++ +CK G I A+ VFD +T +KP+++++NT++NG+
Sbjct: 123 FYKEIL-ECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G L+E + N M G +P+ TY+ +I GLC ++DEA L +M G N
Sbjct: 182 IKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C GK D A+ + ++ ++PD+ +Y +I GFCK G + L+ E
Sbjct: 242 VTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLC-KEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G D Y+ ++ +C+ G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEM 407
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 165/311 (53%), Gaps = 5/311 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ ++ A + ++ + + P+ TY T+I G+CK+G ++ A KVFD
Sbjct: 147 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 206
Query: 220 M----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M VKP + YN +I G+C +G+L+ A + M+ RG TYN +++ L ++G
Sbjct: 207 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 266
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R EA L+ +M G +V T+ ++ G C G +A+ N+ + V +Y
Sbjct: 267 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 326
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I K G+ E L E RG++P + +NA+ +G +DRA ++ +M +
Sbjct: 327 ALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 386
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ V+YNT++ GLC+ GR+ + L+D M G D Y+ L+ GY +G+V++
Sbjct: 387 RIAPDDVTYNTLMRGLCLL-GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 445
Query: 456 VMQIAHEMVTK 466
++I +EM+ K
Sbjct: 446 ALRIRNEMMNK 456
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 166/317 (52%), Gaps = 8/317 (2%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRV 171
L K K + LI Y D+G + A+ + + + +E G + +YN L+ L
Sbjct: 208 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLY--RDRMVERGVAMTVATYNLLVHALFMD 265
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
A E ++ + + P DV TY +I G+CK G ++ A ++F+ M+ V+ ++
Sbjct: 266 GRGTEAYELVEEMGGKGLAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 324
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y +I KKG+++E K +E + RG RP+ + YNA+I +G +D A +M +M
Sbjct: 325 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 384
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ T+ ++++GLC++G+ D+A + + E + PD+ +Y +I+G+ G
Sbjct: 385 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 444
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A+ + EM +G PT+ ++NA+ + L +NG+ D A ++K+M + P+ +Y ++I
Sbjct: 445 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 504
Query: 409 CGLCMAKGRMQDVEDLV 425
GL R D E L
Sbjct: 505 EGLTTEDERAIDDERLA 521
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 143/280 (51%), Gaps = 4/280 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
+P +T+ M+R C G A ++ M +PN + YNT+I GFC +G ++ A M
Sbjct: 110 LPLCTTTFNIMLRHLCSAGKPARALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIM 168
Query: 250 NEMMNR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLC 307
EM R G PN+ TY +I G C GRVDEA + +M G K + +++ G C
Sbjct: 169 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 228
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
GK D A+ Y ++E + V +Y ++++ G+ EA L++EM +GL P VF
Sbjct: 229 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 288
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++N + + G + +A+ + + M + V+Y +I L KG++Q+ + L D
Sbjct: 289 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS-KKGQVQETDKLFDE 347
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+R G D +Y+ L+ + GN++ +I EM K+
Sbjct: 348 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 387
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
S A +L +M L +FN + R L G+ RA+ LL+QMP+ PN V+YNT
Sbjct: 95 SAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNT 150
Query: 407 IICGLCMAKGRMQDVEDLVDRMI-RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+I G C ++GR+Q D++ M R G + Y ++ G+C+ G V+ +++ EM+T
Sbjct: 151 VIAGFC-SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 209
Query: 466 K 466
K
Sbjct: 210 K 210
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 170/322 (52%), Gaps = 9/322 (2%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G A+ F + + + N ++Y SL+ L + + A E ++ ++ +PP V+
Sbjct: 12 GQHGQAVQLFREERCVPNE---FTYGSLIHGLCKAGKLDQAYELLDEM-RDRGIPPGVAV 67
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM- 252
+ +IRG CK G +A F + P+++ +N +++ K G +EEA + M
Sbjct: 68 HNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMH 127
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ C PN +TY +I GLC +G++D A L+ M G NV T+ +++GLC G+
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT 187
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D+ L+ + PDV Y ++NG CK + DEA+ L++ M G PTV ++N++
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ + ++DRA L++ M + C P+ ++YNT+I GLC R+ D + L+ +M+ +
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCR-DARLDDAQALLKQMVAAR 306
Query: 433 HNLDFTMYSCLLKGYCEEGNVE 454
D YS ++ G C++ V+
Sbjct: 307 CVPDVITYSTIIDGLCKDWRVD 328
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 174/340 (51%), Gaps = 10/340 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I+ G A+ +F + + ++N L+ LV+ ++ A + F + +
Sbjct: 71 VIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSS 130
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P+V TYTT+I G CK G ++ A ++ D+M PN++ Y+ ++ G CK G ++
Sbjct: 131 QCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKG 190
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ EM RG +P+ + YN ++ GLC + R+DEA L+ M +G V T+ S+++
Sbjct: 191 FTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMEL 250
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C + D+A ++ + E PDV +Y VI G C+ + D+A +LLK+M A P
Sbjct: 251 FCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310
Query: 366 VFSFNAVFRILVENGELD------RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
V +++ + L ++ +D A +L+ M Q C PN +Y +I GLC A+ + Q
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR-KSQ 369
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
L+ RMI S D + +S ++ C+ +++ +I
Sbjct: 370 QALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKI 409
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 168/338 (49%), Gaps = 12/338 (3%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N L +LVR A + F + E VP + TY ++I G CK G ++ A ++ D M
Sbjct: 2 NCALNLLVRAGQHGQAVQLFRE---ERCVPNEF-TYGSLIHGLCKAGKLDQAYELLDEMR 57
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ P + +N +I G CK G +A + C P+ +T+N ++ L +GRV+
Sbjct: 58 DRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117
Query: 279 EAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA + M + NV T+ +++ GLC GK D+A+ L + E P+V +Y V+
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+ G CK G++D+ +LL+EM RG +P V +N + L ++ LD A+ L++ M + C
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P V+YN+++ C +K ++ L+ M G D Y+ ++ G C + +++
Sbjct: 238 YPTVVTYNSLMELFCRSK-QVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQ 296
Query: 458 QIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSW 495
+ +MV R + + ++D L W V W
Sbjct: 297 ALLKQMVA--ARCVPDVITYSTIIDGLCKDWRVD-ADW 331
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 164/317 (51%), Gaps = 13/317 (4%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+LL L + + A E +++ P V TY +++ +C+ ++ A ++ VM
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPT-VVTYNSLMELFCRSKQVDRAFRLIQVM 267
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ + P+++ YNT+I G C+ L++A+ + +M+ C P+ +TY+ +I GLC + RV
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327
Query: 278 DE------AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
D A ++ M+ G N T+ +++GLC K QA+ LR ++++ + PD+
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
S+ +VI CK D A + M R KP ++ A+ L + GE+D+A+ + +
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + P +YN+++ GLC GR+++ +V+ MI D Y L++G C
Sbjct: 448 MVE-SFRPGVATYNSVLDGLC-GVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505
Query: 452 NVENVMQIAHEMVTKKG 468
VE ++ + V KG
Sbjct: 506 CVEEAYEL-FQAVEAKG 521
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 4/206 (1%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKK 239
+++K+ PP+ TY +I G C+ + A + M V P+L +++ +I CK
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+L+ A K M R C+PN + Y A+I GL G VD+A + M + F+ V+T+
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM-VESFRPGVATY 459
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S+L GLC VG+ ++AV + ++ PD SY +I G C++ +EA L + + A
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEA 519
Query: 360 RGLKPTVFSFNAVFRILVENGELDRA 385
+G V +N + L + L A
Sbjct: 520 KGFAMEVGVYNVLVNELCKKKRLSDA 545
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 143/318 (44%), Gaps = 47/318 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ + R + A Q++ E PPDV Y T+I G C+ +++A+ +
Sbjct: 243 TYNSLMELFCRSKQVDRAFRLI-QVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301
Query: 220 MTVK---PNLLAYNTMINGFCKKG------ELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
M P+++ Y+T+I+G CK +LE A + + M GC PN TY +I G
Sbjct: 302 MVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEG 361
Query: 271 LCINGRVDEAKMLMAKM-------RLNGF----------------------------KDN 295
LC + +A L+ +M L+ F K N
Sbjct: 362 LCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPN 421
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
+ +++ GL G+ D+AV ++E+ P V +Y V++G C +G+ +EA+ +++
Sbjct: 422 PVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVE 480
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
M + P S+ A+ R L ++ A L + + YN ++ LC K
Sbjct: 481 GMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKK 540
Query: 416 GRMQDVEDLVDRMIRSGH 433
R+ D + +++I +G+
Sbjct: 541 -RLSDAHGVANKLIEAGY 557
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 7/208 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y ++ L R + A +++ VVP D+S+++ +I CK ++ A K+F +
Sbjct: 354 TYAVVIEGLCRARKSQQALALLRRMIDSEVVP-DLSSFSMVIGSLCKSHDLDAAYKIFGM 412
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ KPN +AY +I+G K GE+++A + E+M RP TYN+++ GLC GR
Sbjct: 413 MSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGR 471
Query: 277 VDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++EA +M+ + F D S + ++++GLC V ++A + V +V Y
Sbjct: 472 IEEAVRMVEGMIHKECFPDGAS-YGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYN 530
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLK 363
V++N CK + +A + ++ G K
Sbjct: 531 VLVNELCKKKRLSDAHGVANKLIEAGYK 558
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L S++ ++G L + + + A + F ++ E P+ Y +I G K G ++ A +VF
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFG-MMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445
Query: 218 DVM--TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
++M + +P + YN++++G C G +EEA + + M+++ C P+ +Y A+I GLC
Sbjct: 446 ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
V+EA L + GF V + ++ LC + A G ++EA
Sbjct: 506 CVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 173/347 (49%), Gaps = 40/347 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L S++S++GV R + A +F ++ +VP D YT +I GYC+ + A K+
Sbjct: 364 LISFSSIVGVFSRNGELGRALAYFEKMKGVGLVP-DTVIYTILINGYCRNDDVSGALKMR 422
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + +++ YNT++NG C+ L++A + EM+ RG P+ T +I+G C +
Sbjct: 423 NEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKD 482
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + +A L M L K +V T+ +++ G C VG+ ++A +++ + P S+
Sbjct: 483 GNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISF 542
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL------------ 382
++INGFC +G EA L EM+ +G+KPT+ + N + + + G L
Sbjct: 543 SILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMIS 602
Query: 383 -----------------------DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
DRA L+ M + LPN V+YN I+ G GRMQ
Sbjct: 603 EGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFS-RHGRMQ 661
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E ++ +MI G N D + Y+ L+ GY + N++ ++ EM+ +
Sbjct: 662 EAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQR 708
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 167/309 (54%), Gaps = 9/309 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y +V A+ + + +E G + +YN+LL L R + A+E F ++V+
Sbjct: 405 LINGYCRNDDVSGALKM--RNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVE 462
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELE 243
V P D T TT+I GYCK G + A +F+ MT+ KP+++ YNT+++GFCK GE+E
Sbjct: 463 RGVFP-DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEME 521
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+AK+ +M++R P+ ++++ +I G C G V EA L +M+ G K + T +++
Sbjct: 522 KAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTII 581
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
KG G +A +L ++ + PD +Y +IN F K D A L+ M RGL
Sbjct: 582 KGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLL 641
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + ++NA+ +G + A ++L +M P+ +Y ++I G ++K M++
Sbjct: 642 PNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGY-VSKDNMKEAFR 700
Query: 424 LVDRMIRSG 432
+ D M++ G
Sbjct: 701 VHDEMLQRG 709
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 168/382 (43%), Gaps = 42/382 (10%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
D I ++A R +A + + AC N+LLG +V+V + LA + +
Sbjct: 158 DLLIRTYVQARKLREGSEAFQLLRKRGFCVSINAC----NALLGAIVKVGWVDLAWKVYE 213
Query: 183 QIVK----------------------------------ENVVPPDVSTYTTMIRGYCKMG 208
VK E V D+ TY T++ YC+ G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
++ A + D M +KP L YN +ING CK+G E AK+ ++EM+ G PN T+N
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
M+ C V EA+ + +M G ++ + S++ G+ +A+ Y +
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ PD Y ++ING+C+ A+ + EM RG V ++N + L LD A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L K+M + P+F + T+I G C G M L + M D Y+ L+
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYC-KDGNMTKALSLFETMTLRSLKPDVVTYNTLMD 512
Query: 446 GYCEEGNVENVMQIAHEMVTKK 467
G+C+ G +E ++ ++M++++
Sbjct: 513 GFCKVGEMEKAKELWYDMISRE 534
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 169/343 (49%), Gaps = 9/343 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFH--QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L+ AY RG V A K ++ G L++YN+L+ L + S + A+ +++
Sbjct: 265 LVNAYCRRGLVSEAFGLVDCMAGKGLKPG--LFTYNALINGLCKEGSYERAKRVLDEMLG 322
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ P + +T+ M+ C+ + A++VF+ M V P+L+++++++ F + GEL
Sbjct: 323 VGLCP-NAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELG 381
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A +M G P+ + Y +I G C N V A + +M G +V T+ ++L
Sbjct: 382 RALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLL 441
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GLC D A + ++E + PD + +I+G+CK G +A+SL + M R LK
Sbjct: 442 NGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLK 501
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++N + + GE+++A L M + P+++S++ +I G C + G + +
Sbjct: 502 PDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFC-SLGLVSEAFR 560
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L D M G + ++KGY GN+ + M+++
Sbjct: 561 LWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISE 603
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 157/344 (45%), Gaps = 40/344 (11%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
++ L+ V+ ++ E F Q++++ ++ ++ K+G ++ A KV++
Sbjct: 157 FDLLIRTYVQARKLREGSEAF-QLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215
Query: 221 TVKPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
N++ N M+N CK G+L+ ++EM +G + +TYN ++ C G V
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L+ M G K + T+ +++ GLC G +++A L ++ + P+ ++ +
Sbjct: 276 SEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPM 335
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP---- 393
+ C+ EA + EM RG+ P + SF+++ + NGEL RA+ ++M
Sbjct: 336 LVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGL 395
Query: 394 -------------------------------QMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+ C+ + V+YNT++ GLC K + D +
Sbjct: 396 VPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGK-MLDDAD 454
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L M+ G DF + L+ GYC++GN+ + + M +
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLR 498
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 40/249 (16%)
Query: 123 DFF-ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
DF+ ++ LI Y GN+ A+ F + +YN+L+ +V ++ A+E +
Sbjct: 468 DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELW 527
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-------------------- 221
+ ++ + P +S ++ +I G+C +G++ A +++D M
Sbjct: 528 YDMISREIFPSYIS-FSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLR 586
Query: 222 ------------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
V P+ + YNT+IN F K+ + A +N M RG PN +T
Sbjct: 587 AGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVT 646
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YNA++ G +GR+ EA+M++ KM G + ST+ S++ G +A ++
Sbjct: 647 YNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEML 706
Query: 324 EANMNPDVK 332
+ PD K
Sbjct: 707 QRGFVPDDK 715
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 119/276 (43%), Gaps = 36/276 (13%)
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++ ++ +I + + +L E + + RG + NA++ + G VD A +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+G NV T M+ LC GK D YL + E + D+ +Y ++N +C+ G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
EA L+ M +GLKP +F++NA+ L + G +RA +L +M + PN ++N
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF---------------------------- 437
++ C K + + E + + M++ G D
Sbjct: 334 PMLVESC-RKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKG 392
Query: 438 -------TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+Y+ L+ GYC +V +++ +EMV +
Sbjct: 393 VGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVER 428
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 205/406 (50%), Gaps = 27/406 (6%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNKL 121
P + Y HT Y + L +H ++ A SL++ ++
Sbjct: 4 PGNSTYRHTLHSYCTMIHFLCTHQMLVEAKSLIRVVVSRKGKDSTSAVFAAILETKGTQI 63
Query: 122 SDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
SD ++ S L+ AY + G V+ AI F K+ + + +L L+++ +L F
Sbjct: 64 SDLYVFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGF 123
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+ +I+ E PP + + ++ +CK G + A+ VFD +T ++P+++++NT++NG+
Sbjct: 124 YKEIL-ECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+ G+L+E + + M G +P+ TY+ +I GLC ++DEA ++ +M NG N
Sbjct: 183 RLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGV 242
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T +++ G C GK D A+ + ++ PD+ +Y +I G C+ G +A L++EM
Sbjct: 243 TFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEM 302
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+GLKP ++ + + G+L+ L K+M + + + V+Y +I GLC +GR
Sbjct: 303 IMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLC-REGR 361
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D E ++ M+ G D Y+ ++ +C+ G+V+ ++ EM
Sbjct: 362 AGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREM 407
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 150/286 (52%), Gaps = 6/286 (2%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF- 180
S +F + L+ + G ++ A F + + S+N+L+ +R+ L E F
Sbjct: 135 SLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGD--LDEGFR 192
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFC 237
+ V PDV TY+ +I G CK ++ A ++ + M + PN + + T+I+G C
Sbjct: 193 LKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHC 252
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G+++ A + +M+++G P+ +TYN +IYGLC G + +A+ L+ +M + G K +
Sbjct: 253 KNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKI 312
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ G C G + + ++ N+ D +Y +I+G C+ G++ +A +L+EM
Sbjct: 313 TYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREM 372
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GLKP ++ + + G++ A LL++M + +P V+
Sbjct: 373 LTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 201/395 (50%), Gaps = 14/395 (3%)
Query: 84 NPNKYHHTTPCYTAITDVLLSHSLIS---------IAASLLKNSNKLSDFFISKLIKAYG 134
N + + T Y A+ D LL S + + +++N + + + +I+
Sbjct: 159 NRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVV 218
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
+G+++ + + + ++ + +YN+L+ + +K A + V ++
Sbjct: 219 SQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAA-NL 277
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNE 251
+Y ++I G C G + ++ + M K P+ + YNT++NGFCK+G L + ++E
Sbjct: 278 ISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSE 337
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ +G PN +TY +I +C G + A + +MR+ G + N T+ +++ G C G
Sbjct: 338 MVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGL 397
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
++A L ++ + +P V +Y +++G+C +G+ EA+ +L+ M RGL P V S++
Sbjct: 398 MNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYST 457
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
V EL +A + ++M + LP+ V+Y+++I GLC+ + ++ + DL M+R
Sbjct: 458 VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQ-KLVEAFDLFREMMRR 516
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G D Y+ L+ YC +G + +++ EMV +
Sbjct: 517 GLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQR 551
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 161/310 (51%), Gaps = 20/310 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + ++ ++V + + P+V TYTT+I CK G + A ++FD
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGL-SPNVVTYTTLINCMCKAGNLSRAVEIFDQ 372
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V+ PN Y T+I+GFC+KG + EA K ++EM+ G P+ +TYNA+++G C GR
Sbjct: 373 MRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGR 432
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V EA ++ M G +V ++ +++ G C + +A ++E + PD +Y
Sbjct: 433 VQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSS 492
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G C K EA L +EM RGL P ++ ++ +GEL +A+ L +M Q
Sbjct: 493 LIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRG 552
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLV---------------DRMIRSGHNLDFTMYS 441
LP+ V+Y+ +I GL K R + + L+ + +I + N +F
Sbjct: 553 FLPDNVTYSVLINGL-NKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVE 611
Query: 442 CLLKGYCEEG 451
L+KG+C +G
Sbjct: 612 GLVKGFCMKG 621
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 125/246 (50%), Gaps = 6/246 (2%)
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL----CINGR-VDEAKML 283
++ ++ + G + +A ++ G P L+YNA++ L N R D+A+ +
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M NG NV T+ +++G+ G ++ +G++R + + ++P+V +Y +I+ CK
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCK 254
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
K EA++LL+ M G+ + S+N+V L G + L+++M +P+ V+
Sbjct: 255 KKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVT 314
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YNT++ G C +G + L+ M+ G + + Y+ L+ C+ GN+ ++I +M
Sbjct: 315 YNTLVNGFC-KEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373
Query: 464 VTKKGR 469
+ R
Sbjct: 374 RVRGLR 379
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 137/291 (47%), Gaps = 20/291 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SY++++ R + A + ++V++ V+P D TY+++I+G C + A +F
Sbjct: 454 SYSTVIAGFCRERELGKAFQMKEEMVEKGVLP-DTVTYSSLIQGLCLQQKLVEAFDLFRE 512
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+ + Y ++IN +C GEL +A + +EM+ RG P+ +TY+ +I GL R
Sbjct: 513 MMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKAR 572
Query: 277 VDEAKMLMAKM----------RLNGFKDNVSTHK-----SMLKGLCVVGKFDQAVGYLRN 321
AK L+ K+ N +N S ++ ++KG C+ G ++A +
Sbjct: 573 TKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKT 632
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+++ N P+ Y ++I+G + G +A +L E+ + A+ + L G
Sbjct: 633 MLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGM 692
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
D LL+ + + C N ++ + +G M V +++ M + G
Sbjct: 693 NDELSRLLQNILR-SCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDG 742
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 106/258 (41%), Gaps = 54/258 (20%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L + A + F ++++ + PPD TYT++I YC G + A ++ D
Sbjct: 489 TYSSLIQGLCLQQKLVEAFDLFREMMRRGL-PPDEVTYTSLINAYCVDGELSKALRLHDE 547
Query: 220 MTVK--------------------------------------PNLLAYNTMIN------- 234
M + P+ + YNT+I
Sbjct: 548 MVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEF 607
Query: 235 --------GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
GFC KG + EA + M+ R +PN YN MI+G G V +A L +
Sbjct: 608 KSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYME 667
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
+ + F + +++K L G D+ L+N++ + D K +V++ K G
Sbjct: 668 LEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGN 727
Query: 347 SDEAISLLKEMRARGLKP 364
D +++L EM GL P
Sbjct: 728 MDAVLNVLTEMAKDGLLP 745
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 203/424 (47%), Gaps = 29/424 (6%)
Query: 65 QTNPYHALFFFNWA-SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK-----NS 118
+T+P AL F WA S P + + + AI ++L ++L+ A +++ N
Sbjct: 398 RTSPRMALRLFRWAESQPG-----FRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM 452
Query: 119 NKLSDFFISK-------------LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
+++ D I LI Y + V+ + F + + + + N +L
Sbjct: 453 HRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRIL 512
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK-- 223
+L + + A E + + + E + P + TY T++ YCK G ++ + M +
Sbjct: 513 RILRDKDLMSKAVEVY-RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGC 571
Query: 224 -PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
PN + YN +ING KKGE E+AK + EM+ G + + TYN +IYG G + EA
Sbjct: 572 APNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALS 631
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M L G V+T+ S + GLC +G+ A+ L +++ N+ PDV SY +I G+C
Sbjct: 632 LQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYC 691
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
++G +A L E+R+ L PT+ ++N + L GEL+ A L +M P+ V
Sbjct: 692 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 751
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+Y ++ G C G + ++ D M+ G LD Y+ + G + G+ + E
Sbjct: 752 TYTILVNGSC-KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 810
Query: 463 MVTK 466
M+ K
Sbjct: 811 MLAK 814
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 147/302 (48%), Gaps = 5/302 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ +Y G V+ + + ++ +YN L+ L + + A+ +++K
Sbjct: 546 LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 605
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+ TY +I GY G++ A + + M +K P + YN+ I G CK G + +A
Sbjct: 606 L-KVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDA 664
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +++M+ P+ ++YN +IYG C G + +A +L ++R + T+ ++L G
Sbjct: 665 MQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDG 724
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ + A ++ + PD+ +Y +++NG CK+G A EM GL+
Sbjct: 725 LCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELD 784
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+++ ++ G+ RA L ++M P+ + YN ++ GLC G +++ +L+
Sbjct: 785 SYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL-GNLEEASELL 843
Query: 426 DR 427
+
Sbjct: 844 QK 845
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 192/383 (50%), Gaps = 26/383 (6%)
Query: 92 TPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFH 147
T Y+ + L + S + A L +K + D ++ + LI ++ G ++ A WF
Sbjct: 222 TSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFD 281
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ ++ + +Y +L+ ++ + A E + ++ + P ++ TYT +I G CK
Sbjct: 282 EMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTP-NIVTYTALIDGLCKA 340
Query: 208 GMIENAKKVFDVM--------------------TVKPNLLAYNTMINGFCKKGELEEAKK 247
G IE A +++ +M + +PN+ Y +++G CK +++EA+
Sbjct: 341 GKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARD 400
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ M GC PN + Y+A+I G C G++DEA+ + M G+ NV T+ S++ L
Sbjct: 401 LLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLF 460
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
+ D A+ L ++E + P+V Y +I+G CK+GK+DEA L+ M +G P V
Sbjct: 461 KDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVV 520
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++ A+ ++G +++ + LL+QM C PNFV+Y +I C + G + + L++
Sbjct: 521 TYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLI-NHCCSTGLLDEAHKLLEE 579
Query: 428 MIRSGHNLDFTMYSCLLKGYCEE 450
M ++ Y +++G+ E
Sbjct: 580 MKQTYWPRHVAGYRKVIEGFNRE 602
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 150/348 (43%), Gaps = 46/348 (13%)
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAY------ 229
E + KE VP D YT MI G C+ + E A M PN+L Y
Sbjct: 28 EALSLLEKEEFVP-DTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCG 86
Query: 230 -----------------------------NTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
N++++ +C+ G+ A K + +M+ GC+P
Sbjct: 87 CLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPG 146
Query: 261 ELTYNAMIYGLCINGR-----VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
+ YN +I G+C + +D A+ +M G N + + LC +GKF++A
Sbjct: 147 YVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKA 206
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+R +M PD +Y VI C K ++A L +EM+ G+ P V+ + +
Sbjct: 207 YNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDS 266
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
+ G +++A +M + C PN V+Y +I ++ ++ ++ + M+ G
Sbjct: 267 FCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSR-KVSKANEVYEMMLSKGCTP 325
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDA 483
+ Y+ L+ G C+ G +E QI ++++ K+ + + RVVD
Sbjct: 326 NIVTYTALIDGLCKAGKIEKASQI-YKIMKKENVEIPDVDMHFRVVDG 372
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 10/271 (3%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE-----LE 243
P + +++ YC+ G A K+ M +P + YN +I G C E L+
Sbjct: 110 PSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLD 169
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A+K EM+ G N++ + LC G+ ++A ++ +M GF + ST+ ++
Sbjct: 170 LAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVI 229
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC K ++A + + + PDV Y +I+ FCK G ++A + EM G
Sbjct: 230 GYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCA 289
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++ A+ +++ ++ +A + + M C PN V+Y +I GLC A G+++
Sbjct: 290 PNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKA-GKIEKASQ 348
Query: 424 LVDRMIRSGHNL-DFTMYSCLLKGYCEEGNV 453
+ M + + D M+ ++ G E NV
Sbjct: 349 IYKIMKKENVEIPDVDMHFRVVDGASNEPNV 379
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 154/330 (46%), Gaps = 29/330 (8%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK-----MGMIENAKK 215
+NSL+ R A + ++V+ P V Y +I G C +++ A+K
Sbjct: 115 FNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYV-VYNILIGGICSSEEPGKDVLDLAEK 173
Query: 216 VFDVMTVKPNLLAYNTMINGF----CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+ M ++ ++ I+ F C G+ E+A + EMM++G P+ TY+ +I L
Sbjct: 174 AYGEM-LEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYL 232
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +V++A L +M+ NG +V + +++ C G +QA + + P+V
Sbjct: 233 CNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNV 292
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK- 390
+Y +I+ + K K +A + + M ++G P + ++ A+ L + G++++A + K
Sbjct: 293 VTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKI 352
Query: 391 ------QMPQMDCL----------PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
++P +D PN +Y ++ GLC A ++++ DL+ M G
Sbjct: 353 MKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAY-QVKEARDLLKSMSVEGCE 411
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ +Y L+ G C+ G ++ ++ M+
Sbjct: 412 PNHVVYDALIDGCCKAGKLDEAQEVFTTML 441
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 128/275 (46%), Gaps = 43/275 (15%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y+SL+ L + + LA + +++ EN P+V YT MI G CK+G + A K+
Sbjct: 449 VYTYSSLIDRLFKDKRLDLALKVLSKML-ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 507
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+M K PN++ Y MI+GF K G +E+ + + +M ++GC PN +TY +I C
Sbjct: 508 VMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCST 567
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +DEA L+ +M+ + +V+ ++ +++G +F ++ + E + P Y
Sbjct: 568 GLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF--NREFIASLYLSFEISENDSVPVAPVY 625
Query: 335 EVVINGFCKIG-------------------------------------KSDEAISLLKEM 357
V+I+ F K G K+D+A L +M
Sbjct: 626 RVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADM 685
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+RG P + + + L+ + A+ LL +
Sbjct: 686 ISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 143/371 (38%), Gaps = 46/371 (12%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
D T CK G A + + P+ + Y MI+G C+ EEA + M
Sbjct: 9 DEFTLGCFAHSLCKSGKWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRM 68
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
C PN LTY ++ G ++ K +++ M G + S++ C G +
Sbjct: 69 RASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDY 128
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCK----------------------------- 343
A L+ +++ P Y ++I G C
Sbjct: 129 AYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKV 188
Query: 344 -----------IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
IGK ++A ++++EM ++G P +++ V L ++++A L ++M
Sbjct: 189 NISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEM 248
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ P+ Y T+I C A G ++ + D M R G + Y+ L+ Y +
Sbjct: 249 KRNGIAPDVYVYTTLIDSFCKA-GFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRK 307
Query: 453 VENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVV---VIM 509
V ++ +EM+ KG + + T ++D L + S I + + V V M
Sbjct: 308 VSKANEV-YEMMLSKGCTPNIVTY-TALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDM 365
Query: 510 ERTVEDGKRSE 520
V DG +E
Sbjct: 366 HFRVVDGASNE 376
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 7/219 (3%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M G R +E T + LC +G+ EA L+ K F + + M+ GLC
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEKEE---FVPDTVLYTKMISGLCEASL 57
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
F++A+ +L + ++ P+V +Y +++ G K +L M G P+ FN+
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR---- 427
+ +G+ A LLK+M Q C P +V YN +I G+C ++ +DV DL ++
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M+ +G L+ S + C G E + EM++K
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSK 216
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 206/415 (49%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y + L +H ++S A SL++
Sbjct: 3 FFTWLSSPANST--FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASXVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 61 ILETKGTQRSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A VFD +T ++P++++
Sbjct: 121 KYFKLVWGFYKEIL-ECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L+E + + M G +P+ TY+ +I GLC ++D+A L +M
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 240 VKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLKP ++ + + G LB A +M + + + V+Y +I
Sbjct: 300 QANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLC-QEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEM 413
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 159/293 (54%), Gaps = 6/293 (2%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF- 180
S +F + L+ + G+++ A F + + SYN+L+ +R+ L E F
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGD--LDEGFR 198
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFC 237
+ + V PDV TY+ +I G CK +++A ++FD M VK PN + + T+I+G C
Sbjct: 199 LKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHC 258
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G ++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M + G K +
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKI 318
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ G C G B A + ++E N+ D +Y +I+G C+ G+ +A +L+ M
Sbjct: 319 TYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXM 378
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+ GLKP ++ + + G++ + LLK+M + +P+ V+YN ++ G
Sbjct: 379 LSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 166/311 (53%), Gaps = 5/311 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ ++ A + ++ + + P+ TY T+I G+CK+G ++ A KVFD
Sbjct: 187 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 246
Query: 220 M----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M VKP + YN +I G+C +G+L+ A + M+ RG TYN +++ L ++G
Sbjct: 247 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 306
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R EA L+ +M G +V T+ ++ G C G +A+ N+ + V +Y
Sbjct: 307 RGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 366
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I K G+ E L E RG++P + +NA+ +G +DRA ++ +M +
Sbjct: 367 SLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 426
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ V+YNT++ GLC+ GR+ + L+D M + G D Y+ L+ GY +G+V++
Sbjct: 427 RIAPDDVTYNTLMRGLCLL-GRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKD 485
Query: 456 VMQIAHEMVTK 466
++I +EM+ K
Sbjct: 486 ALRIRNEMMNK 496
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 166/317 (52%), Gaps = 8/317 (2%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRV 171
L K K + LI Y D+G + A+ + + + +E G + +YN L+ L
Sbjct: 248 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLY--RDRMVERGVAMTVATYNLLVHALFMD 305
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
A E ++ + + DV TY +I G+CK G ++ A ++F+ M+ V+ ++
Sbjct: 306 GRGTEAYELVEEMGGKGLAL-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 364
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y ++I KKG+++E K +E + RG RP+ + YNA+I +G +D A +M +M
Sbjct: 365 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 424
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ T+ ++++GLC++G+ D+A + + + + PD+ +Y +I+G+ G
Sbjct: 425 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 484
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A+ + EM +G PT+ ++NA+ + L +NG+ D A ++K+M + P+ +Y ++I
Sbjct: 485 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544
Query: 409 CGLCMAKGRMQDVEDLV 425
GL R D E L
Sbjct: 545 EGLTTEDERAIDDERLA 561
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 4/276 (1%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+T+ M+R C G A ++ M +PN + YNT+I GFC +G ++ A M EM
Sbjct: 154 TTTFNIMLRHLCSAGKPARALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMR 212
Query: 254 NR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGK 311
R G PN+ TY +I G C GRVDEA + +M G K + +++ G C GK
Sbjct: 213 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 272
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A+ Y ++E + V +Y ++++ G+ EA L++EM +GL VF++N
Sbjct: 273 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNI 332
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ + G + +A+ + + M + V+Y ++I L KG++Q+ + L D +R
Sbjct: 333 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS-KKGQVQETDKLFDEAVRR 391
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G D +Y+ L+ + GN++ +I EM K+
Sbjct: 392 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 427
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 24/193 (12%)
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM---EANMNPDVKSYEVV----------- 337
FK +S K+ L L V+ D A L N++ A + P S +
Sbjct: 64 FKSALSADKA-LSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIS 122
Query: 338 ---INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++ S A +L +M L +FN + R L G+ RA+ LL+QMP+
Sbjct: 123 TASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 182
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI-RSGHNLDFTMYSCLLKGYCEEGNV 453
PN V+YNT+I G C ++GR+Q D++ M R G + Y ++ G+C+ G V
Sbjct: 183 ----PNAVTYNTVIAGFC-SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRV 237
Query: 454 ENVMQIAHEMVTK 466
+ +++ EM+TK
Sbjct: 238 DEAVKVFDEMLTK 250
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 196/378 (51%), Gaps = 12/378 (3%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE 153
C+ +T + + S+ A++LK + ++ LIK RG +K A+++ Q +
Sbjct: 107 CFCHLTHITFA---FSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQV--VA 161
Query: 154 NGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
G L SY +L+ L + K ++ + + V PDV Y T+I CK ++
Sbjct: 162 QGFQLNQVSYRTLINGLCKTGETKAVARLLRKL-EGHSVKPDVVMYNTIIHSLCKNKLLG 220
Query: 212 NAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
+A ++ M VK PN++ YN ++ GFC G L+EA +NEM + P+ T+N +I
Sbjct: 221 DACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLI 280
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
L G++ AK+++A M K +V T+ S++ G + K A ++ ++ +
Sbjct: 281 DALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVT 340
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P+V++Y +I+G CK DEA+SL +EM+ + + P + ++ ++ L +N L+RAI L
Sbjct: 341 PNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIAL 400
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
K+M + P+ SY ++ LC GR+++ ++ R++ G++L+ Y+ ++ G C
Sbjct: 401 CKKMKEQGIQPDVYSYTILLDALCKG-GRLENAKEFFQRLLVKGYHLNVQTYNVMINGLC 459
Query: 449 EEGNVENVMQIAHEMVTK 466
+ M + +M K
Sbjct: 460 KADLFGEAMDLKSKMEGK 477
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 180/354 (50%), Gaps = 28/354 (7%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V A+ F + K + +Y SL+ L + + ++ A ++ KE + PDV +YT
Sbjct: 359 VDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKM-KEQGIQPDVYSYT 417
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
++ CK G +ENAK+ F + VK N+ YN MING CK EA ++M +
Sbjct: 418 ILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGK 477
Query: 256 GCRPNELTYNAMIYGL-----------------------CINGRVDEAKMLMAKMRLNGF 292
GC P+ +T+ +I L R+ EAK+++A M
Sbjct: 478 GCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACI 537
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
K +V T+ +++ G +V + A ++ + + P+V+ Y ++I+G CK DEA+S
Sbjct: 538 KPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMS 597
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
L +EM+ + + P + ++ ++ L +N L+RAI LLK+M + P+ SY ++ GLC
Sbjct: 598 LFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLC 657
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ GR++ +++ R++ G++L+ +Y+ ++ C+ G + + + +M K
Sbjct: 658 KS-GRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDK 710
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 139/276 (50%), Gaps = 5/276 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + +K A +++ +N+ PDV T+ T+I K G ++ AK V V
Sbjct: 240 TYNALVYGFCIMGHLKEAFSLLNEMKLKNI-NPDVCTFNTLIDALGKEGKMKAAKIVLAV 298
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KP+++ YN++I+G+ +++ AK M G PN TY MI GLC
Sbjct: 299 MMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKM 358
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA L +M+ ++ T+ S++ GLC ++A+ + + E + PDV SY +
Sbjct: 359 VDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 418
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++ CK G+ + A + + +G V ++N + L + A+ L +M
Sbjct: 419 LLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKG 478
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
C+P+ +++ TIIC L K E ++ MI G
Sbjct: 479 CMPDAITFKTIICAL-FEKDENDKAEKILREMIARG 513
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 135/263 (51%), Gaps = 15/263 (5%)
Query: 110 IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK---QIENGACL----YSYN 162
I A K+ N ++ + ++I RG +A +AK + AC+ +Y
Sbjct: 490 ICALFEKDENDKAEKILREMIA----RGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYG 545
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV 222
+L+ VN +K A+ F+ + + V P +V YT MI G CK ++ A +F+ M
Sbjct: 546 TLMDGYFLVNELKHAKYVFYSMAQMGVTP-NVQCYTIMIDGLCKKKTVDEAMSLFEEMKH 604
Query: 223 K---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
K PN++ Y ++I+ CK LE A + EM G +P+ +Y ++ GLC +GR++
Sbjct: 605 KNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEG 664
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
AK + ++ + G+ NV + +M+ LC G FD+A+ + + PD +++++I
Sbjct: 665 AKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIW 724
Query: 340 GFCKIGKSDEAISLLKEMRARGL 362
+ ++D+A +L EM ARGL
Sbjct: 725 ALFEKDENDKAEKILXEMIARGL 747
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 171/402 (42%), Gaps = 65/402 (16%)
Query: 95 YTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
YT + D L ++ A SL +K N + D + LI +++ AI + K
Sbjct: 346 YTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMK 405
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE---------NVV----------- 190
+ +YSY LL L + ++ A+EFF +++ + NV+
Sbjct: 406 EQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFG 465
Query: 191 --------------PPDVSTYTTMI----------------RGYCKMGMIE-------NA 213
PD T+ T+I R G+ E A
Sbjct: 466 EAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEA 525
Query: 214 KKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
K V VMT +KP+++ Y T+++G+ EL+ AK M G PN Y MI G
Sbjct: 526 KIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDG 585
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC VDEA L +M+ N+ T+ S++ LC ++A+ L+ + E + PD
Sbjct: 586 LCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPD 645
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V SY ++++G CK G+ + A + + + +G V + A+ L + G D A+ L
Sbjct: 646 VYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQX 705
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+M C+P+ V+++ II L K E ++ MI G
Sbjct: 706 KMEDKGCMPDAVTFDIIIWAL-FEKDENDKAEKILXEMIARG 746
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 215 KVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
K F+ P+L N ++N FC + A + ++ RG PN +T N +I GLC
Sbjct: 87 KKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFR 146
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + +A ++ GF+ N ++++++ GLC G+ LR + ++ PDV Y
Sbjct: 147 GEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMY 206
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+ CK +A L EM +G+ P V ++NA+ G L A LL +M
Sbjct: 207 NTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKL 266
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ P+ ++NT+I L +G+M+ + ++ M+++ D Y+ L+ GY V+
Sbjct: 267 KNINPDVCTFNTLIDALG-KEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVK 325
Query: 455 NVMQIAHEM 463
N + + M
Sbjct: 326 NAKYVFYSM 334
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 114/250 (45%), Gaps = 18/250 (7%)
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G P+ T N ++ C + A ++A + G+ N T +++KGLC G+ +A
Sbjct: 93 GATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKA 152
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ + V+ + SY +ING CK G++ LL+++ +KP V +N +
Sbjct: 153 LYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHS 212
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L +N L A L +M PN V+YN ++ G C+ G +++ L++ M N
Sbjct: 213 LCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIM-GHLKEAFSLLNEMKLKNINP 271
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSW 495
D ++ L+ + + K+G++ K L ++ A + +VT S
Sbjct: 272 DVCTFNTLI-----------------DALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSL 314
Query: 496 ISRFVFVHQV 505
I + F+++V
Sbjct: 315 IDGYFFLNKV 324
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 228/489 (46%), Gaps = 49/489 (10%)
Query: 20 LVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWAS 79
+ + ++ ++ L P+ + L ++S L N V +V+ + +LFFF W +
Sbjct: 1 MASDVSGIVAILTSVGDRPE--AEAALAKYSRNLVPNTVGRVLQVIKDVDVSLFFFRWVT 58
Query: 80 NPNPNPNKYHHTTPCYTAITDVLLS---HSLISI-AASLLKNSNKLSDFFISKLIKAYGD 135
+ + H+ C + ++ + H I LL + + LI +
Sbjct: 59 RSHRGES-IHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCK 117
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
G+++ A + K+ + + +++S++ L ++ A ++F + V+ PD
Sbjct: 118 AGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE---CAPDSV 174
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
+ ++ G CK + A+++ + M+ + P+++ YN++I+G CK +EEA++ + M
Sbjct: 175 LFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETM 234
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ R RPN +TYN +IYG C G A L+ +M +G +V T S++ G C K
Sbjct: 235 VKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKI 294
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D+A L + + P++ +Y V+I+G C G+++EA LL EM RG+ P + ++N++
Sbjct: 295 DKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSL 354
Query: 373 FRI----------------LVENG-------------------ELDRAILLLKQMPQMDC 397
I +VE G D A LL M
Sbjct: 355 IGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGA 414
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+PN ++N+++ GLC ++ R+ + L+ M R G + + Y L+ G C+ G V++
Sbjct: 415 IPNLFTFNSLMEGLCCSR-RLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAK 473
Query: 458 QIAHEMVTK 466
++ MV++
Sbjct: 474 EVLVMMVSE 482
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 151/276 (54%), Gaps = 5/276 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ L + ++ A + +VK V P++ TY T+I GYCK G A ++ +
Sbjct: 210 TYNSLIDGLCKSYRMEEARQLLETMVKRKV-RPNLVTYNTLIYGYCKTGCTGLAHQLIER 268
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P+++ +N++I+GFC+K ++++A + ++ M C PN +TYN +I GLC GR
Sbjct: 269 MIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGR 328
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+EA L+++M G ++ T+ S++ C + +QA ++E + PD SY
Sbjct: 329 ANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCT 388
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ K + DEA +LL M G P +F+FN++ L + LD A LL M ++
Sbjct: 389 LAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVG 448
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
C P +Y ++ GLC A GR+ D ++++ M+ G
Sbjct: 449 CDPAASTYEVLVTGLCKA-GRVDDAKEVLVMMVSEG 483
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 124/219 (56%), Gaps = 5/219 (2%)
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+E++ + C N +TYN +I G C G ++ A L+A+M+ G +V TH S+++ LC
Sbjct: 94 DELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNT 153
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G +A+ Y R +E PD + ++++G CK + EA +++EM RG+ P V ++
Sbjct: 154 GNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTY 211
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N++ L ++ ++ A LL+ M + PN V+YNT+I G C G L++RMI
Sbjct: 212 NSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYC-KTGCTGLAHQLIERMI 270
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+SG + D ++ L+ G+C++ ++ ++ H M KKG
Sbjct: 271 QSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLM--KKG 307
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 127/248 (51%), Gaps = 7/248 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++NSL+ + + I A E H ++K+ + P++ TY +I G C G A ++
Sbjct: 280 TFNSLISGFCQKSKIDKACEVLH-LMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSE 338
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+++ YN++I FC+ ++E+A + N M+ RG P+ ++Y + L + R
Sbjct: 339 MDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSER 398
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
DEA L+ M G N+ T S+++GLC + D+A L + +P +YEV
Sbjct: 399 FDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEV 458
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ G CK G+ D+A +L M + G++P V S + L G+ D A+ Q+ +
Sbjct: 459 LVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAE 518
Query: 397 ---CLPNF 401
C P++
Sbjct: 519 SKACDPSY 526
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 127/269 (47%), Gaps = 9/269 (3%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE 153
C T T L+H LI ++++ + LI + + + A H K+
Sbjct: 254 CKTGCTG--LAHQLIE---RMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308
Query: 154 NGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
L +YN L+ L A E ++ ++P D+ TY ++I +C+ IE A
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILP-DIITYNSLIGIFCRNFQIEQA 367
Query: 214 KKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
++ ++M V P+ ++Y T+ K +EA ++ M + G PN T+N+++ G
Sbjct: 368 FQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEG 427
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC + R+DEA+ L+A MR G ST++ ++ GLC G+ D A L ++ + P
Sbjct: 428 LCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPL 487
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRA 359
V S +++ + GK D A+ ++ A
Sbjct: 488 VSSSGTIVHTLAREGKQDLALHYFDQVVA 516
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YNSL+G+ R I+ A + + +V+ V+P +S Y T+ K + A +
Sbjct: 348 IITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGIS-YCTLAVALLKSERFDEAFALL 406
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M PNL +N+++ G C L+EA+ + M GC P TY ++ GLC
Sbjct: 407 DNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKA 466
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GRVD+AK ++ M G + VS+ +++ L GK D A+ Y V+ A SY
Sbjct: 467 GRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSY 526
Query: 335 EVVINGFCKI---GKSD 348
+ ++ F K+ GKS+
Sbjct: 527 QKLLE-FVKVLREGKSN 542
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 169/305 (55%), Gaps = 5/305 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N+L+G L R + E Q+ E+ PD+ Y T+I G CK G +E A ++
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +KPN++ YNT++ G C +EA++ ++EM + C +++T+N ++ C N
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G VD L+ +M +G +V T+ +++ G C G D+AV L+++ P+ SY
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+V+ G C G+ +A L+ +M +G P +FN + L + G +++AI LLKQM
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ +SY+T+I GL A G+ ++ +L++ M+ G + + +YS + EG V
Sbjct: 490 NGCSPDLISYSTVIDGLGKA-GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548
Query: 455 NVMQI 459
V+Q+
Sbjct: 549 KVIQM 553
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 147/275 (53%), Gaps = 4/275 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D+ +Y +++G C + +++ D M PN++ +NT+I C+ G E + +
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M GC P+ Y +I G+C G ++ A ++ +M G K NV + ++LKGLC
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
++ +A L + + + D ++ ++++ FC+ G D I LL++M + G P V ++
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
V + G +D A++LLK M C PN VSY ++ GLC A GR D E+L+ +MI
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA-GRWVDAEELMSQMI 453
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ G + ++ L+ C++G VE +++ +M+
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 162/309 (52%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN++L L K AEE ++ +++ P D T+ ++ +C+ G+++ ++ + M
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDC-PLDDVTFNILVDFFCQNGLVDRVIELLEQM 382
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
P+++ Y T+INGFCK+G ++EA + M + GC+PN ++Y ++ GLC GR
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A+ LM++M G N T +++ LC G +QA+ L+ ++ +PD+ SY V
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K GK++EA+ LL M +G+ P ++++ L G +++ I + +
Sbjct: 503 IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTI 562
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ V YN +I LC + D M+ +G + + Y+ L+KG EG +
Sbjct: 563 RSDAVLYNAVISSLC-KRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621
Query: 458 QIAHEMVTK 466
++ E+ ++
Sbjct: 622 ELLSELCSR 630
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 144/279 (51%), Gaps = 4/279 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
VPP+ T+ ++RG C G I +A +V D M+ K P Y+ ++ C+ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + M +GC + N ++ +C G VDEA L+ K+ G + ++ ++ ++LKGL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C+ ++ + ++ + P++ ++ +I C+ G + +L +M G P +
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+ + + + G L+ A +L +MP PN V YNT++ GLC A+ R ++ E+L+
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE-RWKEAEELLS 345
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
M + LD ++ L+ +C+ G V+ V+++ +M++
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 1/273 (0%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
V Y M+ GYC+ G + A+++ + V PN + ++ G C +G + +A + ++EM
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+GC P Y+ ++ C +G + ++ M G + +L +C G D
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+AVG LR + D+ SY V+ G C + + L+ EM P + +FN +
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L NG +R +L QM + C P+ Y TII G+C +G ++ ++++RM G
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGIC-KEGHLEVANEILNRMPSYGL 317
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ Y+ +LKG C + ++ EM K
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 154/320 (48%), Gaps = 14/320 (4%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAY---NTMINGFCKKGELEEAK 246
+PP Y ++ C+ G N+ +V + M K L N ++N C++G ++EA
Sbjct: 145 IPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV 201
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ ++ GC + ++YNA++ GLC+ R + + LM +M N+ T +++ L
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G F++ L + E PD++ Y +I+G CK G + A +L M + GLKP V
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+N V + L A LL +M Q DC + V++N ++ C G + V +L++
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ-NGLVDRVIELLE 380
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLL 486
+M+ G D Y+ ++ G+C+EG ++ + + M + + V ++L
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK-------PNTVSYTIVL 433
Query: 487 MWIVTGGSWISRFVFVHQVV 506
+ + G W+ + Q++
Sbjct: 434 KGLCSAGRWVDAEELMSQMI 453
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
+IR C G A + ++AYN M+ G+C+ G+L A++ +
Sbjct: 52 ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAV---PVP 108
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
PN T+ ++ GLC GR+ +A ++ +M G + +L+ C G F +V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
L + D + +V+N C+ G DEA+ LL+++ G + + S+NAV + L
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
L+ +M ++DC PN V++NT+I LC G + V +++ +M G D
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC-RNGLFERVHEVLAQMSEHGCTPDIR 287
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEM 463
MY+ ++ G C+EG++E +I + M
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRM 312
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 39/271 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ + + E Q++ +P DV TYTT+I G+CK G+I+ A +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMP-DVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 220 MT---VKPNLLAY-----------------------------------NTMINGFCKKGE 241
M+ KPN ++Y NT+IN CKKG
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+E+A + + +M+ GC P+ ++Y+ +I GL G+ +EA L+ M G N + S
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+ L G+ ++ + N+ + + D Y VI+ CK ++D AI M + G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQM 392
P ++ + + L G A LL ++
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSEL 627
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 166/311 (53%), Gaps = 5/311 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ ++ A + ++ + + P+ TY T+I G+CK+G ++ A KVFD
Sbjct: 74 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 133
Query: 220 M----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M VKP + YN +I G+C +G+L+ A + M+ RG TYN +++ L ++G
Sbjct: 134 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 193
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R EA L+ +M G +V T+ ++ G C G +A+ N+ + V +Y
Sbjct: 194 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 253
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I K G+ E L E RG++P + +NA+ +G +DRA ++ +M +
Sbjct: 254 SLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 313
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ V+YNT++ GLC+ GR+ + L+D M + G D Y+ L+ GY +G+V++
Sbjct: 314 RIAPDDVTYNTLMRGLCLL-GRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKD 372
Query: 456 VMQIAHEMVTK 466
++I +EM+ K
Sbjct: 373 ALRIRNEMMNK 383
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 167/317 (52%), Gaps = 8/317 (2%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRV 171
L K K + LI Y D+G + A+ + + + +E G + +YN L+ L
Sbjct: 135 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLY--RDRMVERGVAMTVATYNLLVHALFMD 192
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
A E ++ + + P DV TY +I G+CK G ++ A ++F+ M+ V+ ++
Sbjct: 193 GRGTEAYELVEEMGGKGLAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 251
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y ++I KKG+++E K +E + RG RP+ + YNA+I +G +D A +M +M
Sbjct: 252 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 311
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ T+ ++++GLC++G+ D+A + + + + PD+ +Y +I+G+ G
Sbjct: 312 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 371
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A+ + EM +G PT+ ++NA+ + L +NG+ D A ++K+M + P+ +Y ++I
Sbjct: 372 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 431
Query: 409 CGLCMAKGRMQDVEDLV 425
GL R D E L
Sbjct: 432 EGLTTEDERAIDDERLA 448
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 144/280 (51%), Gaps = 4/280 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
+P +T+ M+R C G A ++ M +PN + YNT+I GFC +G ++ A M
Sbjct: 37 LPLCTTTFNIMLRHLCSAGKPARALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIM 95
Query: 250 NEMMNR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLC 307
EM R G PN+ TY +I G C GRVDEA + +M G K + +++ G C
Sbjct: 96 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 155
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
GK D A+ Y ++E + V +Y ++++ G+ EA L++EM +GL P VF
Sbjct: 156 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 215
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++N + + G + +A+ + + M + V+Y ++I L KG++Q+ + L D
Sbjct: 216 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS-KKGQVQETDKLFDE 274
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+R G D +Y+ L+ + GN++ +I EM K+
Sbjct: 275 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 314
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
S A +L +M L +FN + R L G+ RA+ LL+QMP+ PN V+YNT
Sbjct: 22 SAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNT 77
Query: 407 IICGLCMAKGRMQDVEDLVDRMI-RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+I G C ++GR+Q D++ M R G + Y ++ G+C+ G V+ +++ EM+T
Sbjct: 78 VIAGFC-SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 136
Query: 466 K 466
K
Sbjct: 137 K 137
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 192/389 (49%), Gaps = 11/389 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P+ Y C+ I + L + + +LK ++ D +++L+K D V A
Sbjct: 82 PDCCTYSIVIGCFCRIGRLELGFAAFGL---ILKTGWRVDDIVVNQLLKGLCDTKRVGEA 138
Query: 143 I-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV--KENVVPPDVSTYTT 199
+ Q ++ + SYN+LL L + A E H +V +++ PDV +Y
Sbjct: 139 MHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNI 198
Query: 200 MIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
+I G+ G ++ A +F M V P+++ YNT+I+G CK E++ A+ +M+ +G +P
Sbjct: 199 VINGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N +TYN +I GLC VD A+ + KM G K + T+ +++ GLC D+A G
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ +++ + PD +Y +I+G CK D+A + ++M +G+KP ++ + L +
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL--DF 437
+DRA + +QM PN +YN +I G ++ G+ ++V + M S H+L D
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGY-LSTGQWEEVVQRIKEM--SAHDLEPDV 435
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y LL C+ G + M+ K
Sbjct: 436 FTYGLLLDYLCKNGKCNEARSLFDSMIRK 464
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 183/337 (54%), Gaps = 13/337 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ L + + AE+ F Q+V++ V P +V TY T+I G CK ++ A+ VF
Sbjct: 227 TYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNV-TYNTIIDGLCKAQEVDMAEGVFQK 285
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M VKP+ + YNT+I+G CK ++ A+ +M++RG +P+ +TYN +I GLC
Sbjct: 286 MVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQA 345
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D+A+ + +M G K + T+ ++ GLC D+A G + +++ + P+ +Y
Sbjct: 346 IDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNC 405
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+ G+ +E + +KEM A L+P VF++ + L +NG+ + A L M +
Sbjct: 406 LIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG 465
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ Y ++ G KG + ++ DL++ M+ +G + + +++ ++ Y + ++ V
Sbjct: 466 IKPSVTIYGIMLHGY-GKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEV 524
Query: 457 MQIAHEM--------VTKKGRLLKLKNFLTRVVDALL 485
M I +M V G L+ L RV DA+L
Sbjct: 525 MHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVL 561
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 158/344 (45%), Gaps = 38/344 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP---------------------------- 191
+Y ++ L + S+ AE F Q++ + V P
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426
Query: 192 ------PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
PDV TY ++ CK G A+ +FD M +KP++ Y M++G+ KKG L
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E +N M+ G PN +N +I +DE + KM+ G NV T+ ++
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTL 546
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ LC +G+ D AV ++ + P+ + ++ G C + K ++ L EM +G+
Sbjct: 547 IDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGI 606
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+P + FN V L + G + A L+ M M P+ +SYNT+I G C A RM +
Sbjct: 607 RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFAS-RMDEAV 665
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+D M+ +G + Y+ LL GYC+ G ++N + EM+ K
Sbjct: 666 KLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRK 709
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 157/309 (50%), Gaps = 7/309 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ L + +I AE F Q++ + V PD TYT +I G CK ++ A+ VF
Sbjct: 332 TYNTIIDGLCKAQAIDKAEGVFQQMIDKGV-KPDNLTYTIIIDGLCKAQSVDRAEGVFQQ 390
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M VKPN YN +I+G+ G+ EE + + EM P+ TY ++ LC NG+
Sbjct: 391 MIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGK 450
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN-MNPDVKSYE 335
+EA+ L M G K +V+ + ML G G + L N+M AN ++P+ + +
Sbjct: 451 CNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLL-NLMVANGISPNHRIFN 509
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
VI + K DE + + +M+ +GL P V ++ + L + G +D A+L QM
Sbjct: 510 TVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINE 569
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
PN V +N+++ GLC + + VE+L M+ G D ++ +L C+EG V
Sbjct: 570 GVTPNNVVFNSLVYGLCTVD-KWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVME 628
Query: 456 VMQIAHEMV 464
++ MV
Sbjct: 629 ARRLIDSMV 637
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 145/281 (51%), Gaps = 4/281 (1%)
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEE 244
N + P+ + T+I Y K MI+ +F M + PN++ Y T+I+ CK G +++
Sbjct: 499 NGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDD 558
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A N+M+N G PN + +N+++YGLC + ++ + L +M G + ++ ++L
Sbjct: 559 AVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLC 618
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
LC G+ +A + +++ + PDV SY +I+G C + DEA+ LL M + GLKP
Sbjct: 619 NLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKP 678
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ S+N + + G +D A L ++M + P +YNTI+ GL GR + +L
Sbjct: 679 NIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGL-FRSGRFSEAREL 737
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
MI+S YS +L G+C+ + +I + +
Sbjct: 738 YVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCS 778
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 176/330 (53%), Gaps = 9/330 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYS--YNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI A G V A+ F+Q I G + +NSL+ L V+ + EE F +++
Sbjct: 546 LIDALCKLGRVDDAVLQFNQ--MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLN 603
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + PD+ + T++ CK G + A+++ D M +KP++++YNT+I+G C ++
Sbjct: 604 QGI-RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMD 662
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA K ++ M++ G +PN ++YN +++G C GR+D A L +M G V T+ ++L
Sbjct: 663 EAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTIL 722
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GL G+F +A N++++ + +Y ++++GFCK DEA + + + + L+
Sbjct: 723 NGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQ 782
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+ +FN + L + G + A+ L +P +P+ V+Y I L + +G +++++
Sbjct: 783 LDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENL-IEEGSLEELDC 841
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
L M +SG + M + L++ + G +
Sbjct: 842 LFSVMEKSGTAPNSHMLNALIRKLLDRGEI 871
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 179/358 (50%), Gaps = 51/358 (14%)
Query: 156 ACLYSYNSLLGVLVRV---NSIKLAEEFFHQIVKE--NVVPPDVSTYTTMIRGYCKMGMI 210
A + + N LL V+ R +S KLA F++++++ N V PD TY+ +I +C++G +
Sbjct: 41 ASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRL 100
Query: 211 E-----------------------------NAKKVFDVMTV----------KPNLLAYNT 231
E + K+V + M V + +++YNT
Sbjct: 101 ELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNT 160
Query: 232 MINGFCKKGELEEAKKCMNEMM---NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
++ G C + EEA++ ++ M+ + C P+ ++YN +I G G+VD+A L +M
Sbjct: 161 LLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM- 219
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G +V T+ +++ GLC + D+A + ++E + P+ +Y +I+G CK + D
Sbjct: 220 --GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVD 277
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
A + ++M +G+KP+ ++N + L + +DRA + +QM P+ V+YNTII
Sbjct: 278 MAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTII 337
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GLC A+ + E + +MI G D Y+ ++ G C+ +V+ + +M+ K
Sbjct: 338 DGLCKAQA-IDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDK 394
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 171/332 (51%), Gaps = 7/332 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I AY R + + F + KQ + +Y +L+ L ++ + A F+Q++ E
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
V P +V + +++ G C + E +++F M ++P+++ +NT++ CK+G + EA
Sbjct: 571 VTPNNV-VFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEA 629
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ ++ M+ G +P+ ++YN +I G C R+DEA L+ M G K N+ ++ ++L G
Sbjct: 630 RRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHG 689
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM-RARGLKP 364
C G+ D A R ++ + P V++Y ++NG + G+ EA L M ++R L
Sbjct: 690 YCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLW- 748
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++ +++ + +N D A + + + MD + +++N +I GL GR +D DL
Sbjct: 749 SICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGL-FKGGRKEDAMDL 807
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+ +G Y + + EEG++E +
Sbjct: 808 FAAIPANGLVPSVVTYRLIAENLIEEGSLEEL 839
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 145/313 (46%), Gaps = 5/313 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y LL L + A F ++++ + P V+ Y M+ GY K G + +
Sbjct: 435 VFTYGLLLDYLCKNGKCNEARSLFDSMIRKGI-KPSVTIYGIMLHGYGKKGALSEMHDLL 493
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
++M + PN +NT+I + K+ ++E +M +G PN +TY +I LC
Sbjct: 494 NLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKL 553
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GRVD+A + +M G N S++ GLC V K+++ ++ + PD+ +
Sbjct: 554 GRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFF 613
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+ CK G+ EA L+ M GLKP V S+N + +D A+ LL M
Sbjct: 614 NTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN VSYNT++ G C A GR+ + L M+R G Y+ +L G G
Sbjct: 674 AGLKPNIVSYNTLLHGYCKA-GRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFS 732
Query: 455 NVMQIAHEMVTKK 467
++ M+ +
Sbjct: 733 EARELYVNMIKSR 745
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 4/238 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN+L+ + + A + +V + P++ +Y T++ GYCK G I+NA +F
Sbjct: 647 SYNTLIDGHCFASRMDEAVKLLDGMVSAGL-KPNIVSYNTLLHGYCKAGRIDNAYCLFRE 705
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P + YNT++NG + G EA++ M+ + TY+ ++ G C N
Sbjct: 706 MLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNC 765
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
DEA + + + ++ T M+ GL G+ + A+ + + P V +Y +
Sbjct: 766 FDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRL 825
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ + G +E L M G P NA+ R L++ GE+ RA L ++ +
Sbjct: 826 IAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDE 883
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 127/283 (44%), Gaps = 21/283 (7%)
Query: 94 CYTAITDVLLSHSLIS--IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQ 151
C DV+ ++LI AS + + KL D +S +K + + + + +A +
Sbjct: 638 CMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKP--NIVSYNTLLHGYCKAGR 695
Query: 152 IENGACLY-------------SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
I+N CL+ +YN++L L R A E + ++K + + TY+
Sbjct: 696 IDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWS-ICTYS 754
Query: 199 TMIRGYCKMGMIENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
++ G+CK + A K+F M ++ +++ +N MI+G K G E+A +
Sbjct: 755 IILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPAN 814
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G P+ +TY + L G ++E L + M +G N ++++ L G+ +A
Sbjct: 815 GLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRA 874
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
YL + E N + + + ++I+ F + A SL ++ R
Sbjct: 875 GAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPEKCR 917
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 186/358 (51%), Gaps = 4/358 (1%)
Query: 113 SLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+L+ K F + +I + +++A + K+ + ++N ++G
Sbjct: 34 GILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKG 93
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAY 229
I LA + F +++K+N P + TYT +I Y G I+ A K+ D M ++P+ Y
Sbjct: 94 KIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTY 153
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N + G CK+G+++ A + + + +RGC+P+ +TYN ++ L G+ DE + M+++
Sbjct: 154 NVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFS 213
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G + NV T+ ++ LC GK +++V ++ + E + PD Y+ +I FC+ GK D
Sbjct: 214 RGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDM 273
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
AI L M G P + ++N + L +NG D A+ + ++ ++ C PN SYNT++
Sbjct: 274 AIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLS 333
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
L + R + + ++ +M+ G + D Y+ L+ C +G V+ + + +M++ +
Sbjct: 334 ALWSSGDRYRAL-GMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGR 390
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 176/374 (47%), Gaps = 41/374 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIEN-GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
+I + +G + A+ F + + N L +Y L+ + I A + +++
Sbjct: 85 MIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSR 144
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENA---KKVFDVMTVKPNLLAYNTMINGFCKKGELEE 244
+ PD TY + RG CK G ++ A + + KP+++ YN ++ +G+ +E
Sbjct: 145 GL-EPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDE 203
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+K M+E+ +RGC PN +TY+ +I LC +G+++E+ L+ M+ G + + ++
Sbjct: 204 GEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIA 263
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI------------- 351
C GK D A+ +L ++ PD+ +Y ++ CK G D A+
Sbjct: 264 AFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPP 323
Query: 352 ----------------------SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
++ +M ++G+ P V ++N++ L +G +D AI LL
Sbjct: 324 NVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLL 383
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
M PN VSY T++ GLC A R+ D +++ MI +G + T Y+ L++G
Sbjct: 384 ADMLSGRFQPNIVSYKTVLLGLCKAH-RIDDAIEVLAAMIENGCQPNETTYTLLIEGIGF 442
Query: 450 EGNVENVMQIAHEM 463
G+ M++A+ +
Sbjct: 443 SGSRTQAMELANSL 456
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 145/276 (52%), Gaps = 4/276 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTV--KPNLLAYNTMINGFCKKGELEEAKKCM 249
PDV T +I+G+ I+ A +V ++ KP++ AYN +I+GFCK +E AK +
Sbjct: 8 PDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRIESAKTVL 67
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M +G P+ +T+N MI C G++D A K+ ++ N K + T+ +++ +
Sbjct: 68 DRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYIL 127
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G D+A+ L ++ + PD +Y V+ G CK GK D A ++ + +RG KP V +
Sbjct: 128 EGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVIT 187
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + R L+ G+ D + ++ C PN V+Y+ +I LC G++++ +LV M
Sbjct: 188 YNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLC-RDGKIEESVNLVKVM 246
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G D Y L+ +C EG ++ ++ M+
Sbjct: 247 KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMI 282
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 4/242 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+ L+ L R I+ + +++KE + PD Y +I +C+ G ++ A + D
Sbjct: 222 TYSILISSLCRDGKIEESVNLV-KVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P+++ YNT++ CK G + A + ++ GC PN +YN M+ L +G
Sbjct: 281 MICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGD 340
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
A ++++M G +V T+ S++ LC G D+A+G L +++ P++ SY+
Sbjct: 341 RYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKT 400
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
V+ G CK + D+AI +L M G +P ++ + + +G +A+ L + M+
Sbjct: 401 VLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMN 460
Query: 397 CL 398
+
Sbjct: 461 AI 462
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 199/389 (51%), Gaps = 26/389 (6%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE 153
CY+ + LS S+ A++LK + LIK +G + A+ FH K +
Sbjct: 56 CYSQLGQNALS---FSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKAL-HFHD-KVVA 110
Query: 154 NGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
G L SY +L+ L +V + A EF +I +V PDV Y T+I G CK ++
Sbjct: 111 QGFKLNQVSYGTLINGLCKVGQTRAALEFLRRI-DGKLVQPDVVMYNTIIDGLCKDKLVN 169
Query: 212 NAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
+A ++ M K P+++ YNT+I G C +L++A +++M+ P T++ +I
Sbjct: 170 DAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILI 229
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG---LCVVGK-----------FDQ 314
C G++ EAK + A M K N+ T+ S++ G + VV K D+
Sbjct: 230 DAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDE 289
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+ + + PD+ Y +I+G CK G++ A+ + EM RG P +F++N++
Sbjct: 290 AMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLD 349
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L +N +D+AI LL ++ P+ +YN +I GLC + GR++D E + + ++ G+N
Sbjct: 350 ALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKS-GRLKDAEKVFEDLLVKGYN 408
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D Y+ ++KG+C++G + + + +M
Sbjct: 409 TDVYTYNAMIKGFCKKGLFDETLAMVSKM 437
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 138/266 (51%), Gaps = 18/266 (6%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
+K AI H+ + +Y+++ L+ + +K A+ F ++KE+V P++ T
Sbjct: 201 AQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDV-KPNIVT 259
Query: 197 YTTMIRGYCKMGMIENAKKVFDVM-----------------TVKPNLLAYNTMINGFCKK 239
Y +++ G+ + +++ AK +F+ M + P+++ YN++I+G CK
Sbjct: 260 YNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKS 319
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G A K + EM RG P+ TYN+++ LC N VD+A L+ K++ G + +V T+
Sbjct: 320 GRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTY 379
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ GLC G+ A +++ N DV +Y +I GFCK G DE ++++ +M+
Sbjct: 380 NILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKD 439
Query: 360 RGLKPTVFSFNAVFRILVENGELDRA 385
G P + + R L + GE D+A
Sbjct: 440 SGCSPDAKNCEIIIRSLFDKGENDKA 465
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 136/258 (52%), Gaps = 18/258 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ L + +K A H+++ E++ P V T++ +I +CK G ++ AK VF V
Sbjct: 189 TYNTLICGLCIMAQLKDAIGLLHKMILEDI-NPTVYTFSILIDAFCKEGKMKEAKNVFAV 247
Query: 220 M---TVKPNLLAYNTMINGF-----CKKGE---------LEEAKKCMNEMMNRGCRPNEL 262
M VKPN++ YN++++G KK + ++EA EM + P+ +
Sbjct: 248 MMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMV 307
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
YN++I GLC +GR A + +M G ++ T+ S+L LC D+A+ L +
Sbjct: 308 IYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKL 367
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ + P V +Y ++ING CK G+ +A + +++ +G V+++NA+ + + G
Sbjct: 368 KDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLF 427
Query: 383 DRAILLLKQMPQMDCLPN 400
D + ++ +M C P+
Sbjct: 428 DETLAMVSKMKDSGCSPD 445
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 117/223 (52%), Gaps = 1/223 (0%)
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
NL+ + +IN + + G+ + ++ +G + +T+ +I GLC+ G + +A
Sbjct: 46 NLVTLSILINCYSQLGQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFH 105
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
K+ GFK N ++ +++ GLC VG+ A+ +LR + + PDV Y +I+G CK
Sbjct: 106 DKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKD 165
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
++A +L EM A+ + P+V ++N + L +L AI LL +M D P ++
Sbjct: 166 KLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTF 225
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+ +I C +G+M++ +++ M++ + Y+ L+ G+
Sbjct: 226 SILIDAFC-KEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGH 267
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 1/182 (0%)
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M NG N+ T ++ +G+ + N+++ D ++ +I G C
Sbjct: 34 LHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANILKKGYGSDAITFTTLIKGLC 93
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
G+ +A+ ++ A+G K S+ + L + G+ A+ L+++ P+ V
Sbjct: 94 LKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVV 153
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
YNTII GLC K + D +L M+ Y+ L+ G C +++ + + H+
Sbjct: 154 MYNTIIDGLCKDK-LVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHK 212
Query: 463 MV 464
M+
Sbjct: 213 MI 214
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 319 LRNVMEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L ME N + ++ + ++IN + ++G++ + S+ + +G +F + + L
Sbjct: 34 LHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANILKKGYGSDAITFTTLIKGLC 93
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
GE+ +A+ ++ N VSY T+I GLC G+ + + + R+ D
Sbjct: 94 LKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKV-GQTRAALEFLRRIDGKLVQPDV 152
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
MY+ ++ G C++ V + + EMV K+
Sbjct: 153 VMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 178/306 (58%), Gaps = 6/306 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN+L+ L + ++ A ++ E+ + PDV T+ +++ G CK I +A VF
Sbjct: 473 LVTYNTLVTGLSKSGMVRDALGLLEFMI-ESGLSPDVITFNSVLDGLCKEQRILDAHNVF 531
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+PN++ Y+T+I+G K +++EA + + +M+ GCR N +TY+ ++ GL
Sbjct: 532 KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV 591
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+++A +++ +MR G + T+ +++ G + +AVG LR ++EA +P V +Y
Sbjct: 592 GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ +G C+ G+ DEA+ +L M ARG P +++++ L + G + A+ ++M +
Sbjct: 652 TTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 711
Query: 395 MDCL-PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ + P+ ++Y+ +I GLC A GR+ + + ++RMIR+G D +S L+ G C+ G +
Sbjct: 712 DEVVAPHVIAYSALIDGLCKA-GRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 770
Query: 454 ENVMQI 459
+ +++
Sbjct: 771 DTGLEL 776
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 186/375 (49%), Gaps = 27/375 (7%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIEN-GACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
S LI+ + G V A + + +E ++Y LL L + + E+ F Q++
Sbjct: 385 STLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQML 444
Query: 186 KE--------------------NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---V 222
+ V P + TY T++ G K GM+ +A + + M +
Sbjct: 445 EREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGL 504
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P+++ +N++++G CK+ + +A + RGCRPN +TY+ +I GL ++DEA
Sbjct: 505 SPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQ 564
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L+AKM G + N T+ +++ GL VG+ + AV LR + +A PD +Y +I+GF
Sbjct: 565 LLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFF 624
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K + EA+ LL+EM G P+V ++ + L +G D A+ +L M C PN +
Sbjct: 625 KRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAI 684
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM-YSCLLKGYCEEGNVENVMQIAH 461
+Y++I+ GLC A GR+ + ++M R + YS L+ G C+ G ++ +
Sbjct: 685 TYSSIVDGLCKA-GRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLE 743
Query: 462 EMVTKKGRLLKLKNF 476
M+ + GR+ + F
Sbjct: 744 RMI-RAGRIPDVVTF 757
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 158/343 (46%), Gaps = 40/343 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+S++ L + + A +F ++ ++ VV P V Y+ +I G CK G I+ A + +
Sbjct: 685 TYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLER 744
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P+++ ++ +ING C G ++ + M RGC+ + YNAMI C+ G
Sbjct: 745 MIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGE 804
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY------------------ 318
A L+ +M+ +G N TH ++K LC + D+AV Y
Sbjct: 805 FSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLI 864
Query: 319 ---------------LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LR ++ +PD +Y V++G K G + A LL+EMR+RG
Sbjct: 865 TSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHS 924
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + ++ + L + +L A ++M + + P+ + Y+++I C A V+D
Sbjct: 925 PDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKA----DKVDD 980
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ SG TMYS ++ C+ + +++ EM +K
Sbjct: 981 AWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSK 1023
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 152/310 (49%), Gaps = 10/310 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YN L+ L + + A F + ++ P V TY+T+I G C+ ++ K+
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGF-RPTVVTYSTVIDGLCRDNEVDKGCKLL 59
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + PN + YNT++N +G +EA + M GC P +T+ +I GLC
Sbjct: 60 EEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKE 119
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G ++ A ++ +M GF +V H +L LC +G+ D+A + + V+ PD +Y
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++G K G+ + A +L+ + PTVF+F L + G L A MPQ
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLV-DRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
PN V+Y+ +I GLC A G++ L+ D+ ++G +S LL G C+ +
Sbjct: 240 TGVSPNTVTYDALIDGLCKA-GKLDIALGLLRDKNSQAG----MFAFSSLLHGLCQAHRL 294
Query: 454 ENVMQIAHEM 463
E +Q+ M
Sbjct: 295 EEAIQLLKAM 304
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 177/411 (43%), Gaps = 47/411 (11%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFH 147
T Y+ + D LL + A +L+ ++ L D + LI + R ++ A+
Sbjct: 578 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 637
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ + + +Y +L L R A E + P + TY++++ G CK
Sbjct: 638 EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAI-TYSSIVDGLCKA 696
Query: 208 GMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM---------- 253
G + A F+ M V P+++AY+ +I+G CK G ++EA + + M+
Sbjct: 697 GRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVT 756
Query: 254 -------------------------NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
RGC+ + YNAMI C+ G A L+ +M+
Sbjct: 757 FSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMK 816
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+G N TH ++K LC + D+AV Y ++ E D SY +I +S+
Sbjct: 817 THGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCR--DEISYNTLITSLVASRRSE 874
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A+ LL+ M A G P ++ V L + G + A LL++M P+ +Y +I
Sbjct: 875 QALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMI 934
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
GL AK ++ D + M+R D +YS L+ +C+ V++ ++
Sbjct: 935 SGLSKAK-QLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL 984
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 180/395 (45%), Gaps = 66/395 (16%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A + G V A F+F Q I +YN+++ L + ++ A Q++ E+
Sbjct: 147 LLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLE-AAGMVLQLLAES 205
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE---- 241
P V T+T + G K G + A + FD M V PN + Y+ +I+G CK G+
Sbjct: 206 FSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIA 265
Query: 242 ----------------------------LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
LEEA + + M C PN + +N+++ GLC
Sbjct: 266 LGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQ 322
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPDVK 332
RVDEA L M+ +G +V T+ +LKGLC + + +A ++ + +P+V
Sbjct: 323 ARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVV 382
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRA-RGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
++ +I G C G+ ++A + + M A G+ P F++ + L + G+ R +Q
Sbjct: 383 TFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQ 442
Query: 392 M---------------PQMD------CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
M P++D C P V+YNT++ GL + G ++D L++ MI
Sbjct: 443 MLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKS-GMVRDALGLLEFMIE 501
Query: 431 SGHNLDFTMYSCLLKGYCEEGNV---ENVMQIAHE 462
SG + D ++ +L G C+E + NV + A E
Sbjct: 502 SGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 536
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 179/385 (46%), Gaps = 30/385 (7%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + + GN+ A +F Q +Y++L+ L + + +A
Sbjct: 212 FTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIA----LG 267
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELE 243
++++ + +++++ G C+ +E A ++ M PN++ +N+++NG C+ ++
Sbjct: 268 LLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVD 327
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKSM 302
EA + + M GC + +TYN ++ GLC R+ EA + M R G NV T ++
Sbjct: 328 EAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTL 387
Query: 303 LKGLCVVGKFDQAVG-YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++GLC G+ +QA Y R V ++P+ +Y ++ G CK G S ++M R
Sbjct: 388 IQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLERE 447
Query: 362 ---------------------LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
+PT+ ++N + L ++G + A+ LL+ M + P+
Sbjct: 448 WRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPD 507
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+++N+++ GLC + R+ D ++ R + G + YS L+ G + ++ +Q+
Sbjct: 508 VITFNSVLDGLCKEQ-RILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLL 566
Query: 461 HEMVTKKGRLLKLKNFLTRVVDALL 485
+MV R + + VVD LL
Sbjct: 567 AKMVELGCRANTVT--YSTVVDGLL 589
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 152/339 (44%), Gaps = 10/339 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKN---SNKLSDFF-ISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+A+ D L I A L+ + ++ D S LI D G + + F
Sbjct: 722 YSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMA 781
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ A +Y+YN+++ A ++ K + + + T+ +I+ C I
Sbjct: 782 ERGCKADIYAYNAMINAYCLKGEFSAAYALLEEM-KTHGIAKNTVTHGIVIKALCGNDRI 840
Query: 211 ENAKKVFDVMTVK-PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
+ A F + + ++YNT+I E+A + + M+ G P+ Y ++
Sbjct: 841 DEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMD 900
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
GL G + A L+ +MR G ++ T+ M+ GL + A Y ++ N+ P
Sbjct: 901 GLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKP 960
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
D Y +I+ FCK K D+A LL R+ G++PT+ ++ + L +N D+A+ ++
Sbjct: 961 DAIVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTITMYSTMVDSLCKNRGTDKALEVI 1017
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++M +C P + ++ +A+GR+ + LV+ +
Sbjct: 1018 REMKSKNCEPGIHIWTSLATAY-VAEGRVDEAVKLVNDL 1055
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 94/177 (53%), Gaps = 10/177 (5%)
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y V+ING CK G+ +A + ++ G +PTV +++ V L + E+D+ LL++M
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
C PN V+YNT++ L + +GR ++ L++RM +G + + ++KG C+EG
Sbjct: 63 AGRGCAPNAVTYNTLVNAL-LGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121
Query: 453 VENVMQIAHEMVTKKGRLLKLKNFLTRV-VDALLLMWIVTGGSWISRFVFVHQVVVI 508
+E ++ EMV + F+ V + +LL + G + F QV++I
Sbjct: 122 IEAAFRVVDEMVD--------RGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLI 170
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 9/233 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IKA + A+ +FH E+ SYN+L+ LV + A E +V +
Sbjct: 830 VIKALCGNDRIDEAVSYFHSIP--EDCRDEISYNTLITSLVASRRSEQALELLRAMVADG 887
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
PD Y T++ G K G E A K+ M + P+L Y MI+G K +L A
Sbjct: 888 G-SPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLA 946
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
EM+ + +P+ + Y+++I C +VD+A L+ R +G + ++ + +M+
Sbjct: 947 CDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTITMYSTMVDS 1003
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
LC D+A+ +R + N P + + + + G+ DEA+ L+ +++
Sbjct: 1004 LCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 198/376 (52%), Gaps = 9/376 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNK--LSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT++ +L +S A +++++ +K L + + ++ + ++G++ +A WF + +
Sbjct: 332 YTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQ 391
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ +Y +L+ L R +K AE+ +++ + +V TYT ++ GYCK G +
Sbjct: 392 RKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEV-TYTVLVDGYCKRGKM 450
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A +V + M V PN++ Y + +G CK+G+++ A + ++EM N+G N TYN++
Sbjct: 451 AEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 510
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC G +D+A MA M G K +V T+ +++ LC G+ D+A L+ +++ +
Sbjct: 511 INGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGI 570
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P + +Y V++NGFC G+ + LL+ M + + P ++N++ + +
Sbjct: 571 KPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTE 630
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+ K M + PN +YN +I G C A+ M++ + + MI G L + YS L++
Sbjct: 631 IYKGMCSRNVEPNENTYNILIKGHCKARS-MKEAQYFHNEMIEKGFRLTASSYSALIRLL 689
Query: 448 CEEGNVENVMQIAHEM 463
++ ++ H+M
Sbjct: 690 NKKKKFVEARKLFHDM 705
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 166/313 (53%), Gaps = 5/313 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y ++L + A +F ++ ++ + D TYTT+I G C+ G ++ A+KV M
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFDEMQRKGLAT-DGVTYTTLINGLCRAGELKEAEKVLQEM 425
Query: 221 TVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ + + Y +++G+CK+G++ EA + N M+ RG PN +TY A+ GLC G V
Sbjct: 426 LARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDV 485
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A L+ +M G + N T+ S++ GLC G DQA+ + ++ A + PDV +Y +
Sbjct: 486 QAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTL 545
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ CK G+ D A LL+EM G+KPT+ ++N + +G ++ LL+ M + +
Sbjct: 546 IDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNI 605
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +YN+++ C+ M+ ++ M + Y+ L+KG+C+ +++
Sbjct: 606 HPNATTYNSLMKQYCIGNN-MKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQ 664
Query: 458 QIAHEMVTKKGRL 470
+EM+ K RL
Sbjct: 665 YFHNEMIEKGFRL 677
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 156/308 (50%), Gaps = 8/308 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL VL ++ A + F ++ PPDV TY +I GYC +G +ENA K+ D
Sbjct: 264 SYNILLKVLCGAGRVEDARQLFDEMAS----PPDVVTYGILIHGYCALGELENAVKLLDD 319
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V+PN Y +++ C KG + +A + +M++ +E Y ++ G C G
Sbjct: 320 MVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGD 379
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ A+ +M+ G + T+ +++ GLC G+ +A L+ ++ ++ D +Y V
Sbjct: 380 LVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTV 439
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G+CK GK EA + M RG+ P V ++ A+ L + G++ A LL +M
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
N +YN++I GLC A Q + + D M +G D Y+ L+ C+ G ++
Sbjct: 500 LELNACTYNSLINGLCKAGYLDQAMRTMAD-MDAAGLKPDVYTYTTLIDALCKSGELDRA 558
Query: 457 MQIAHEMV 464
+ EM+
Sbjct: 559 HDLLQEML 566
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 167/360 (46%), Gaps = 32/360 (8%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGF 236
A E F + +NV +Y +++ C G +E+A+++FD M P+++ Y +I+G+
Sbjct: 250 AIELFQGLPDKNVC-----SYNILLKVLCGAGRVEDARQLFDEMASPPDVVTYGILIHGY 304
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C GELE A K +++M+ RG PN Y +++ LC GRV +A ++ M + +
Sbjct: 305 CALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDE 364
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
+ + ++L G C G A + + + D +Y +ING C+ G+ EA +L+E
Sbjct: 365 AVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQE 424
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M AR L ++ + + G++ A + M Q PN V+Y + GLC +G
Sbjct: 425 MLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLC-KQG 483
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM------------- 463
+Q +L+ M G L+ Y+ L+ G C+ G ++ M+ +M
Sbjct: 484 DVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYT 543
Query: 464 -----VTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVVIMERTVEDGKR 518
+ K G L + + L ++D + IVT ++ F M VE GK+
Sbjct: 544 TLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFC--------MSGRVEGGKK 595
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 119/258 (46%), Gaps = 10/258 (3%)
Query: 136 RGNVKAAIFWFHQA--KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
+G+V+AA H+ K +E AC +YNSL+ L + + A + + PD
Sbjct: 482 QGDVQAANELLHEMSNKGLELNAC--TYNSLINGLCKAGYLDQAMRTMADMDAAGL-KPD 538
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
V TYTT+I CK G ++ A + M +KP ++ YN ++NGFC G +E KK +
Sbjct: 539 VYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLE 598
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M+ + PN TYN+++ CI + + M + N +T+ ++KG C
Sbjct: 599 WMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKAR 658
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL--KPTVFS 368
+A + ++E SY +I K K EA L +MR G +P V++
Sbjct: 659 SMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYN 718
Query: 369 FNAVFRILVENGELDRAI 386
F F +N E A+
Sbjct: 719 FYIDFNFNEDNLEATLAL 736
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+A+ + + + N V SY +++ C G+ ++A L EM + P V ++
Sbjct: 247 LDEAIELFQGLPDKN----VCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGI 299
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ GEL+ A+ LL M PN Y +++ LC KGR+ D +V+ M+
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLC-DKGRVSDALTVVEDMVHH 358
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LD +Y+ +L G+C +G++ + + EM K
Sbjct: 359 KVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRK 393
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
LR V + ++P ++ V++ DEAI L + + + V S+N + ++L
Sbjct: 223 LRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDK----NVCSYNILLKVLCG 274
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
G ++ A L +M P+ V+Y +I G C A G +++ L+D M+ G + T
Sbjct: 275 AGRVEDARQLFDEMASP---PDVVTYGILIHGYC-ALGELENAVKLLDDMVARGVEPNAT 330
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+Y+ ++ C++G V + + + +MV K
Sbjct: 331 VYTSVVALLCDKGRVSDALTVVEDMVHHK 359
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 201/437 (45%), Gaps = 55/437 (12%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI ++ G + AI +F + Q G +Y+YNSL+ + + AE F ++
Sbjct: 404 SILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTN 463
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ V P +T+T++I GYCK ++ A K+++ M + PN+ + +I+G C ++
Sbjct: 464 KG-VEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMA 522
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +E++ R +P E+TYN +I G C +G++D+A L+ M G + T++ ++
Sbjct: 523 EASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLI 582
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS----------- 352
GLC G+ +A ++ ++ + N+ + Y +++G+C+ G+ EA+S
Sbjct: 583 SGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGIN 642
Query: 353 ------------------------LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
LLK+M +GL+P + ++ + G +A
Sbjct: 643 MDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFEC 702
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
M +C PN V+Y ++ GLC A G M L RM + + Y C L
Sbjct: 703 WDLMVTEECFPNVVTYTALMNGLCKA-GEMDRAGLLFKRMQAANVPPNSITYGCFLDNLT 761
Query: 449 EEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVVI 508
+EGN++ + + H M LK L V + I+ G + RF H+ +
Sbjct: 762 KEGNMKEAIGLHHAM---------LKGLLANTVTHNI---IIRGFCKLGRF---HEATKV 806
Query: 509 MERTVEDGKRSECLIVS 525
+ E+G +C+ S
Sbjct: 807 LSEMTENGIFPDCVTYS 823
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 158/309 (51%), Gaps = 5/309 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L+ YN+L+ L + + AE + + N+ P + TY+ +I +C+ G ++ A F
Sbjct: 365 LFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGI-TYSILIDSFCRSGRLDVAISYF 423
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M + + AYN++ING CK G+L A+ EM N+G P T+ ++I G C +
Sbjct: 424 DRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKD 483
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+V +A L KM NG NV T +++ GLC K +A ++E + P +Y
Sbjct: 484 LQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTY 543
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+I G+C+ GK D+A LL++M +GL P +++ + L G + +A + + +
Sbjct: 544 NVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHK 603
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ N + Y+ ++ G C +GR+ + MI+ G N+D ++ L+ G ++ + +
Sbjct: 604 QNVKLNEMCYSALLHGYCQ-EGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRK 662
Query: 455 NVMQIAHEM 463
+ +M
Sbjct: 663 TFFDLLKDM 671
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 166/352 (47%), Gaps = 44/352 (12%)
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
A + +Y +L+ R+ + + ++V+ P + + + ++ G K G I++A
Sbjct: 292 AADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAV-SGLVDGLRKQGKIDDAY 350
Query: 215 KVFDVMTVK-----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
++ V+ V PNL YN +IN CK G+L++A+ + M RPN +TY+ +I
Sbjct: 351 EL--VVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILID 408
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA-------------- 315
C +GR+D A +M +G + V + S++ G C G A
Sbjct: 409 SFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEP 468
Query: 316 ---------VGYLRNV------------MEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
GY +++ ++ + P+V ++ +I+G C K EA L
Sbjct: 469 TATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELF 528
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
E+ R +KPT ++N + +G++D+A LL+ M Q +P+ +Y +I GLC +
Sbjct: 529 DELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLC-S 587
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GR+ +D +D + + L+ YS LL GYC+EG + + + EM+ +
Sbjct: 588 TGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQR 639
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 177/404 (43%), Gaps = 50/404 (12%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASL----LKNSNKLSDFFI 126
A +N + PN Y +TA+ L S + ++ A+ L ++ K ++
Sbjct: 489 AFKLYNKMIDNGITPNVY-----TFTALISGLCSTNKMAEASELFDELVERKIKPTEVTY 543
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI+ Y G + A Q Y+Y L+ L + A++F + K
Sbjct: 544 NVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHK 603
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENA--------------------------------K 214
+NV ++ Y+ ++ GYC+ G + A K
Sbjct: 604 QNVKLNEM-CYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRK 662
Query: 215 KVFDVMT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
FD++ ++P+ + Y +MI+ + K+G ++A +C + M+ C PN +TY A++
Sbjct: 663 TFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALM 722
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
GLC G +D A +L +M+ N T+ L L G +A+G L + M +
Sbjct: 723 NGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIG-LHHAMLKGLL 781
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
+ ++ ++I GFCK+G+ EA +L EM G+ P +++ + +G + ++ L
Sbjct: 782 ANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKL 841
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
M P+ V+YN +I G C+ G + +L D M+R G
Sbjct: 842 WDTMLNRGLEPDLVAYNLLIYGCCV-NGELDKAFELRDDMLRRG 884
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 152/314 (48%), Gaps = 9/314 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVK-----ENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
++S LG + V + L+ F +V N + P+V T + ++ G K+ +
Sbjct: 152 FSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWE 211
Query: 216 VFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+FD V+P+ + ++ C+ + AK+ + M G + +TYN +I+GLC
Sbjct: 212 LFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLC 271
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
RV EA + + G +V T+ +++ G C + +F+ + + ++E +P
Sbjct: 272 KGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEA 331
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+ +++G K GK D+A L+ ++ G P +F +NA+ L + G+LD+A LL M
Sbjct: 332 AVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNM 391
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
M+ PN ++Y+ +I C + GR+ DRMI+ G Y+ L+ G C+ G+
Sbjct: 392 SLMNLRPNGITYSILIDSFCRS-GRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGD 450
Query: 453 VENVMQIAHEMVTK 466
+ + EM K
Sbjct: 451 LSAAESLFIEMTNK 464
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 4/212 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
PD YT+MI Y K G + A + +D+M + PN++ Y ++NG CK GE++ A
Sbjct: 678 PDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLL 737
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M PN +TY + L G + EA L M L G N TH +++G C
Sbjct: 738 FKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM-LKGLLANTVTHNIIIRGFCK 796
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+G+F +A L + E + PD +Y +I +C+ G ++ L M RGL+P + +
Sbjct: 797 LGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVA 856
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
+N + NGELD+A L M + +P+
Sbjct: 857 YNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 3/208 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I Y G+ K A + E + +Y +L+ L + + A F ++
Sbjct: 684 TSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQA 743
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM--TVKPNLLAYNTMINGFCKKGELEE 244
NV PP+ TY + K G ++ A + M + N + +N +I GFCK G E
Sbjct: 744 ANV-PPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHE 802
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A K ++EM G P+ +TY+ +IY C +G V + L M G + ++ + ++
Sbjct: 803 ATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIY 862
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G CV G+ D+A +++ + PD K
Sbjct: 863 GCCVNGELDKAFELRDDMLRRGIIPDNK 890
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 169/305 (55%), Gaps = 5/305 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N+L+G L R + E Q+ E+ PD+ Y T+I G CK G +E A ++
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +KPN++ YNT++ G C +EA++ ++EM + C +++T+N ++ C N
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G VD L+ +M +G +V T+ +++ G C G D+AV L+++ P+ SY
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+V+ G C G+ +A L+ +M +G P +FN + L + G +++AI LLKQM
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ +SY+T+I GL A G+ ++ +L++ M+ G + + +YS + EG V
Sbjct: 490 NGCSPDLISYSTVIDGLGKA-GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548
Query: 455 NVMQI 459
V+Q+
Sbjct: 549 KVIQM 553
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 147/275 (53%), Gaps = 4/275 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D+ +Y +++G C + +++ D M PN++ +NT+I C+ G E + +
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M GC P+ Y +I G+C G ++ A ++ +M G K NV + ++LKGLC
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
++ +A L + + + D ++ ++++ FC+ G D I LL++M + G P V ++
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
V + G +D A++LLK M C PN VSY ++ GLC A GR D E+L+ +MI
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA-GRWVDAEELMSQMI 453
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ G + ++ L+ C++G VE +++ +M+
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 162/309 (52%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN++L L K AEE ++ +++ P D T+ ++ +C+ G+++ ++ + M
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDC-PLDDVTFNILVDFFCQNGLVDRVIELLEQM 382
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
P+++ Y T+INGFCK+G ++EA + M + GC+PN ++Y ++ GLC GR
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A+ LM++M G N T +++ LC G +QA+ L+ ++ +PD+ SY V
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K GK++EA+ LL M +G+ P ++++ L G +++ I + +
Sbjct: 503 IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTI 562
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ V YN +I LC + D M+ +G + + Y+ L+KG EG +
Sbjct: 563 RSDAVLYNAVISSLC-KRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621
Query: 458 QIAHEMVTK 466
++ E+ ++
Sbjct: 622 ELLSELCSR 630
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 144/279 (51%), Gaps = 4/279 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
VPP+ T+ ++RG C G I +A +V D M+ K P Y+ ++ C+ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + M +GC + N ++ +C G VDEA L+ K+ G + ++ ++ ++LKGL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C+ ++ + ++ + P++ ++ +I C+ G + +L +M G P +
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+ + + + G L+ A +L +MP PN V YNT++ GLC A+ R ++ E+L+
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE-RWKEAEELLS 345
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
M + LD ++ L+ +C+ G V+ V+++ +M++
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 154/320 (48%), Gaps = 14/320 (4%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAY---NTMINGFCKKGELEEAK 246
+PP Y ++ C+ G N+ +V + M K L N ++N C++G ++EA
Sbjct: 145 IPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV 201
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ ++ GC + ++YNA++ GLC+ R + + LM +M N+ T +++ L
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G F++ L + E PD++ Y +I+G CK G + A +L M + GLKP V
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+N V + L A LL +M Q DC + V++N ++ C G + V +L++
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ-NGLVDRVIELLE 380
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLL 486
+M+ G D Y+ ++ G+C+EG ++ + + M + + V ++L
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK-------PNTVSYTIVL 433
Query: 487 MWIVTGGSWISRFVFVHQVV 506
+ + G W+ + Q++
Sbjct: 434 KGLCSAGRWVDAEELMSQMI 453
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 1/273 (0%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
V Y M+ GYC+ G + A+++ + V PN + ++ G C +G + +A + ++EM
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+GC P Y+ ++ C +G + ++ M G + +L +C G D
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+AVG LR + D+ SY V+ G C + + L+ EM P + +FN +
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L NG +R +L QM + C P+ Y TII G+C +G ++ ++++RM G
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGIC-KEGHLEVANEILNRMPSYGL 317
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ Y+ +LKG C + ++ EM K
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
+IR C G A + ++AYN M+ G+C+ G+L A++ +
Sbjct: 52 ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAV---PVP 108
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
PN T+ ++ GLC GR+ +A ++ +M G + +L+ C G F +V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
L + D + +V+N C+ G DEA+ LL+++ G + + S+NAV + L
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
L+ +M ++DC PN V++NT+I LC G + V +++ +M G D
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC-RNGLFERVHEVLAQMSEHGCTPDIR 287
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEM 463
MY+ ++ G C+EG++E +I + M
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRM 312
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 39/271 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ + + E Q++ +P DV TYTT+I G+CK G+I+ A +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMP-DVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 220 MT---VKPNLLAY-----------------------------------NTMINGFCKKGE 241
M+ KPN ++Y NT+IN CKKG
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+E+A + + +M+ GC P+ ++Y+ +I GL G+ +EA L+ M G N + S
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+ L G+ ++ + N+ + + D Y VI+ CK ++D AI M + G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQM 392
P ++ + + L G A LL ++
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSEL 627
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 177/340 (52%), Gaps = 4/340 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+K Y +GN+ +A+ F++ + +Y+ L+ +I+ A E + Q+ K
Sbjct: 369 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM-K 427
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD--VMTVKPNLLAYNTMINGFCKKGELEE 244
N +PP V +++RGY K + E A K+FD V N+ YN M++ CK G+++E
Sbjct: 428 LNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDE 487
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A ++ M+N+G PN ++YN MI G C G +D A + + M K NV T+ ++
Sbjct: 488 ACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILID 547
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G G ++A+ ++ N+ P ++ +ING CK+G+ EA LK G P
Sbjct: 548 GNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP 607
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ ++N++ ++ G +D A+ + ++M + PN V+Y ++I G C + R+
Sbjct: 608 SCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN-RIDLALKT 666
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D M G LD T YS L+ G+C+ ++E+ + E++
Sbjct: 667 RDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELL 706
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 178/373 (47%), Gaps = 44/373 (11%)
Query: 136 RGNVKAAIFWFHQAKQIENG-----ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVV 190
RG +KA + W +K + A +++YN ++ L + + A +V + +V
Sbjct: 443 RGYLKAPL-WEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV 501
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKK 247
P +V +Y MI G+C+ G ++ A VF M +KPN++ Y+ +I+G KKG+ E+A
Sbjct: 502 P-NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 560
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
++M++ P + T+N +I GLC G++ EA+ + GF + T+ S++ G
Sbjct: 561 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFI 620
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G D A+ R + E ++P+V +Y +INGFCK + D A+ EMR +GL+ V
Sbjct: 621 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVT 680
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL---------------- 411
+++A+ + +++ A L ++ ++ PN + YN++I G
Sbjct: 681 AYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 740
Query: 412 ------------------CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ +GR+ DL M+ G D + L+ G C +G +
Sbjct: 741 INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQL 800
Query: 454 ENVMQIAHEMVTK 466
EN +I EM K
Sbjct: 801 ENARKILEEMDRK 813
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 160/345 (46%), Gaps = 40/345 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN ++ R ++ +A F ++ ++ P+V TY+ +I G K G E A +FD
Sbjct: 506 SYNDMILGHCRKGNMDMASSVFSDMLARDL-KPNVVTYSILIDGNFKKGDSEKALDLFDQ 564
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P +NT+ING CK G++ EA+ + + G P+ +TYN+++ G G
Sbjct: 565 MLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGN 624
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A + +M G NV T+ S++ G C + D A+ + E + DV +Y
Sbjct: 625 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSA 684
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF----------------------R 374
+I+GFCK + A L E+ GL P +N++ R
Sbjct: 685 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 744
Query: 375 I-------------LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
I L++ G L A L +M +P+ ++++ ++ GLC KG++++
Sbjct: 745 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLC-NKGQLENA 803
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+++ M R +Y+ L+ GY EGN++ + EM+ +
Sbjct: 804 RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDR 848
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 176/364 (48%), Gaps = 12/364 (3%)
Query: 93 PCYTAITDVLLSHS-------LISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFW 145
P + D++L H S+ + +L K + S LI +G+ + A+
Sbjct: 502 PNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDL 561
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
F Q + +++N+++ L +V + A + ++E +P TY +++ G+
Sbjct: 562 FDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP-SCMTYNSIVDGFI 620
Query: 206 KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
K G I++A V+ M V PN++ Y ++INGFCK ++ A K +EM +G +
Sbjct: 621 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVT 680
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
Y+A+I G C ++ A+ L ++ G N + SM+ G + + A+ + + +
Sbjct: 681 AYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 740
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ + D+ +Y +I+G K G+ A L EM ++G+ P + +F+ + L G+L
Sbjct: 741 INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQL 800
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
+ A +L++M + + P+ + YNT+I G +G +++ L D M+ G D Y
Sbjct: 801 ENARKILEEMDRKNMTPSVLIYNTLIAGY-FREGNLKEAFTLHDEMLDRGLVPDDVTYDI 859
Query: 443 LLKG 446
L+ G
Sbjct: 860 LING 863
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 150/309 (48%), Gaps = 8/309 (2%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N LL LVR N I + ++++V + D T M+R K G +E A++ F
Sbjct: 229 NILLTALVRRNMIGELRDLYNKMVLRGIYG-DHFTVHVMVRACLKEGRVEEAEEYFRETK 287
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
VK + AY+ +I CKK + + EM RG P+E T+ ++I G +
Sbjct: 288 ERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMV 347
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EA L +M G N+ S++KG C G D A+ + E + P+ +Y V+I
Sbjct: 348 EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 407
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC- 397
G C G ++A L +M+ G+ P+VF+ N++ R ++ + A L + +DC
Sbjct: 408 EGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE--AVDCG 465
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ N +YN ++ LC G+M + L+D M+ G + Y+ ++ G+C +GN++
Sbjct: 466 VANIFTYNIMMSWLCKG-GKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMAS 524
Query: 458 QIAHEMVTK 466
+ +M+ +
Sbjct: 525 SVFSDMLAR 533
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 112/236 (47%), Gaps = 3/236 (1%)
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
+N ++N + + +E A C N M+ + P N ++ L + E + L KM
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 252
Query: 289 LNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
L G + D+ + H M++ G+ ++A Y R E + D +Y ++I CK S
Sbjct: 253 LRGIYGDHFTVH-VMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 311
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
+ + LL+EM+ RG P+ +F +V V G + A+ L ++M N V ++
Sbjct: 312 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 371
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G C A+G + +L +++ G + YS L++G C GN+E ++ +M
Sbjct: 372 MKGYC-AQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 426
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 156/350 (44%), Gaps = 57/350 (16%)
Query: 47 DQFSLCLGSNIVTKVI-----YEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDV 101
D + L N+VT I +++ + AL F+ + N P + T I +
Sbjct: 529 DMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNT-----IING 583
Query: 102 LLSHSLISIAASLLKNSNKLSDFFI------SKLIKAYGDRGNVKAAIFWFHQAKQIENG 155
L +S A LKN L + FI + ++ + GN+ +A+ + + +
Sbjct: 584 LCKVGQMSEARDKLKNF--LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVS 641
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
+ +Y SL+ + N I LA + ++ +E + DV+ Y+ +I G+CK +E+A+
Sbjct: 642 PNVVTYTSLINGFCKSNRIDLALKTRDEM-REKGLELDVTAYSALIDGFCKRRDMESAQD 700
Query: 216 VF-DVMTV--KPNLLAYNTMINGF-----------------------------------C 237
+F +++ V PN + YN+MI+GF
Sbjct: 701 LFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 760
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K+G L A EM+++G P+ +T++ ++ GLC G+++ A+ ++ +M +V
Sbjct: 761 KEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVL 820
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+ +++ G G +A +++ + PD +Y+++ING K +S
Sbjct: 821 IYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 870
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 183/337 (54%), Gaps = 21/337 (6%)
Query: 155 GACL-YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
G CL SY +L+ L +V + A + + V +V P+V Y T+I CK+ ++ A
Sbjct: 139 GLCLKVSYGTLINGLCKVGQARAALQLLRR-VDGKLVQPNVVMYNTIIDSMCKVKLVNEA 197
Query: 214 KKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
++ M + P+++ Y+ +I+GF G+L++A N+M+ +P+ T+N ++ G
Sbjct: 198 FDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDG 257
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C +G++ E K + A M G K NV T+ S++ G C+V + ++A + + +NPD
Sbjct: 258 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPD 317
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+SY ++INGFCKI K DEA++L K+M + + P V ++ ++ L ++G++ A+ L+
Sbjct: 318 TQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVD 377
Query: 391 QMPQMDCLPNFVSYNTIICGLC-----------MAKGRMQDVEDLVDRMIRSGHNLDFTM 439
+M P+ ++Y++I+ LC + K + Q EDL + G+NLD
Sbjct: 378 EMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVK----GYNLDVYA 433
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
Y+ +++G+C +G + + +M GR+ K +
Sbjct: 434 YTVMIQGFCVKGLFNEALALLSKM-EDNGRIPDAKTY 469
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 142/277 (51%), Gaps = 12/277 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + G +K AI F++ +Y++N L+ + +K + F ++K
Sbjct: 217 SALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMK 276
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + P+V TY +++ GYC + + A +F+ M V P+ +YN MINGFCK +++
Sbjct: 277 QGI-KPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVD 335
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA +M + PN +TY ++I GLC +G++ A L+ +M G ++ T+ S+L
Sbjct: 336 EAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSIL 395
Query: 304 KGLCVVGKFDQAVGYL--------RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
LC + D+A+ L ++ N DV +Y V+I GFC G +EA++LL
Sbjct: 396 DALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLS 455
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+M G P ++ + L + E D A LL++M
Sbjct: 456 KMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREM 492
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 121/214 (56%), Gaps = 12/214 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y SL+ V + A F+ + + V PD +Y MI G+CK+ ++ A +F
Sbjct: 285 TYCSLMDGYCLVKQVNKANSIFNTMAQGGV-NPDTQSYNIMINGFCKIKKVDEAMNLFKK 343
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ Y ++I+G CK G++ A K ++EM +RG P+ +TY++++ LC N +
Sbjct: 344 MHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQ 403
Query: 277 VDEAKMLMAKMRLNGFKD--------NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
VD+A L+ K++ F+D +V + M++G CV G F++A+ L + +
Sbjct: 404 VDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRI 463
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
PD K+YE++I K ++D A LL+EM ARGL
Sbjct: 464 PDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 156/325 (48%), Gaps = 20/325 (6%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ N + +++ + L F + ++N PP + + ++ K+ A +
Sbjct: 27 IYTLNYI--TIIKNDEHNLVSSFNRLLHQKNPTPP-IFEFGKILGSLVKINCYHTAISLH 83
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC-- 272
M +K NL+ N +IN F + G+ + ++ +G PN +T +I GLC
Sbjct: 84 RQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLK 143
Query: 273 ------ING--RVDEAKMLMAKM-RLNG--FKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
ING +V +A+ + + R++G + NV + +++ +C V ++A
Sbjct: 144 VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 203
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
++ ++PDV +Y +I+GF +GK +AI L +M +KP V++FN + ++G+
Sbjct: 204 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+ + M + PN V+Y +++ G C+ K ++ + + M + G N D Y+
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVK-QVNKANSIFNTMAQGGVNPDTQSYN 322
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTK 466
++ G+C+ V+ M + +M K
Sbjct: 323 IMINGFCKIKKVDEAMNLFKKMHCK 347
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 156/284 (54%), Gaps = 4/284 (1%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+I++++ PDV TY +I G C G +A+K+ M + P+++ +N +IN C+K
Sbjct: 143 EIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRK 202
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G L A + +M GC PN L+YN +++G C +++ A + KM G ++ T+
Sbjct: 203 GLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTY 262
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++L LC GK D AV L + +P + +Y VI+G K+GK+D+A LL EMRA
Sbjct: 263 NTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRA 322
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+GLKP + +++++ L G++D AI + + PN ++YN I+ GLC A+ +
Sbjct: 323 KGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKAR-KTD 381
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D + M++ G Y+ L++G EG + +++ +E+
Sbjct: 382 RAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 135/259 (52%), Gaps = 4/259 (1%)
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G +E + + M + P+++ ++I GFCK G+ +A + M + + G P+ +TY
Sbjct: 98 GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITY 157
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I G+C GR +A+ L+A M G +V T ++ LC G +A+ L + +
Sbjct: 158 NVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPK 217
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
P+ SY +++GFCK K + AI L +M +RG P + ++N + L ++G++D
Sbjct: 218 HGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDA 277
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A+ LL Q+ C P ++YNT+I GL G+ L+D M G D YS L+
Sbjct: 278 AVELLNQLSSKGCSPVLITYNTVIDGLSKV-GKTDQAAKLLDEMRAKGLKPDIITYSSLV 336
Query: 445 KGYCEEGNVENVMQIAHEM 463
G EG V+ ++ H++
Sbjct: 337 GGLSREGKVDEAIKFFHDL 355
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 116/206 (56%), Gaps = 4/206 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL + ++ A E+ ++ P D+ TY T++ CK G ++ A ++ +
Sbjct: 226 SYNPLLHGFCKEKKMERAIEYLGKMTSRGCYP-DIVTYNTLLTALCKDGKVDAAVELLNQ 284
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
++ K P L+ YNT+I+G K G+ ++A K ++EM +G +P+ +TY++++ GL G+
Sbjct: 285 LSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGK 344
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA + + G K N T+ +++ GLC K D+A+ +L +++ P SY +
Sbjct: 345 VDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTI 404
Query: 337 VINGFCKIGKSDEAISLLKEMRARGL 362
+I G G + EA+ LL E+ RG+
Sbjct: 405 LIEGLAYEGLAKEALELLNELCLRGV 430
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 1/206 (0%)
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
E+ N + L NG ++E + M G ++ S+++G C +GK +A +
Sbjct: 84 EIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIME 143
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ ++ PDV +Y V+I+G C G+ +A LL +M RG P+V +FN + L G
Sbjct: 144 IIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKG 203
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
L RAI +L++MP+ C PN +SYN ++ G C K +M+ + + +M G D Y
Sbjct: 204 LLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEK-KMERAIEYLGKMTSRGCYPDIVTY 262
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTK 466
+ LL C++G V+ +++ +++ +K
Sbjct: 263 NTLLTALCKDGKVDAAVELLNQLSSK 288
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 120/237 (50%), Gaps = 1/237 (0%)
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N ++ + GELEE + + M+ RG P+ + ++I G C G+ +A +M +
Sbjct: 88 NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+G +V T+ ++ G+C G++ A L +++ +P V ++ ++IN C+ G
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
AI +L++M G P S+N + + +++RAI L +M C P+ V+YNT++
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLT 267
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC G++ +L++++ G + Y+ ++ G + G + ++ EM K
Sbjct: 268 ALC-KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAK 323
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 4/175 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A G V AA+ +Q L +YN+++ L +V A + ++ +
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM-RAK 323
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ PD+ TY++++ G + G ++ A K F +V+ VKPN + YN ++ G CK + + A
Sbjct: 324 GLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRA 383
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ M+ RGC+P E +Y +I GL G EA L+ ++ L G S K
Sbjct: 384 IDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSAEK 438
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 173/344 (50%), Gaps = 8/344 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y +G V A + + + +Y+YNSLL + +K A E F + + E
Sbjct: 49 LIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELF-KTMAEK 107
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENA-KKVFDVMTVK---PNLLAYNTMINGFCKKGELEE 244
PDV TY+T+I G CK G + A + +F M + N +AYN +ING CK +E
Sbjct: 108 GFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIER 167
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A K + EM ++G P+ +TYN ++ GLC G+V EAK M G+ +V + +L
Sbjct: 168 AYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLD 227
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
L GK D+A+ ++V+ PD +Y ++ G + DEA + K+M A G P
Sbjct: 228 ALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAP 287
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD-VED 423
+++ V ++D A +L++M ++ +P+ V+YN ++ GLC K + D +
Sbjct: 288 NGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLC--KTNLVDKAHE 345
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
L M+ +G D YS +L G C+ V + + M+ +K
Sbjct: 346 LFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK 389
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 191/365 (52%), Gaps = 18/365 (4%)
Query: 127 SKLIKAYGDRGNVKAAI-FWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
S +I G V A+ FH K IE G A +YN+L+ L + +I+ A + +
Sbjct: 117 STIISGLCKTGKVTEALEMLFH--KMIERGCSANTVAYNALINGLCKDENIERAYKLLEE 174
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+ + VP ++ TY T++ G C+MG + AK+ FD M + P+++AYN +++ K+G
Sbjct: 175 MASKGYVPDNI-TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEG 233
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ +EA K +++ +G P+ +TYN+++ GL +DEA+ + KM +G N +T+
Sbjct: 234 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYS 293
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+L G C K D A L + + PDV +Y ++++G CK D+A L M
Sbjct: 294 IVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 353
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G P + S++ V L + ++ A +L +M + +P+ V++N ++ GLC A G++ +
Sbjct: 354 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKA-GKLDE 412
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRV 480
+DL+D+M SG D+ Y+ L+ G ++G H + + +K K FL+
Sbjct: 413 AKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGR--------HIQADRLTQAMKEKGFLSDC 464
Query: 481 VDALL 485
A L
Sbjct: 465 FKAPL 469
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 165/309 (53%), Gaps = 6/309 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++ +L + ++ + F Q++ +N + PD Y +I GY K G ++ A ++++
Sbjct: 9 YTFRVVLKSFCKQGKLRDGYKLFEQML-DNGISPDGIEYNILIDGYAKKGRVDEANRLYE 67
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M ++P++ YN+++N FCK+ +++EA + M +G P+ +TY+ +I GLC G
Sbjct: 68 EMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTG 127
Query: 276 RVDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+V EA +ML KM G N + +++ GLC ++A L + PD +Y
Sbjct: 128 KVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITY 187
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++G C++GK EA M +RG P V ++N + L + G+ D A+ L K +
Sbjct: 188 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIA 247
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+P+ V+YN+I+ GL K M + E++ +M+ SG + YS +L G+C V+
Sbjct: 248 KGYMPDTVTYNSILLGLA-RKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVD 306
Query: 455 NVMQIAHEM 463
+ ++ EM
Sbjct: 307 DAHKVLEEM 315
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 131/244 (53%), Gaps = 2/244 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN + ++ FCK+G+L + K +M++ G P+ + YN +I G GRVDEA L
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+M G + ++ T+ S+L C K +A+ + + E PDV +Y +I+G CK
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 344 IGKSDEAISLL-KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
GK EA+ +L +M RG ++NA+ L ++ ++RA LL++M +P+ +
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YNTI+ GLC G++ + + D M G++ D Y+ LL +EG + M++ +
Sbjct: 186 TYNTILSGLCRM-GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244
Query: 463 MVTK 466
++ K
Sbjct: 245 VIAK 248
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 192/358 (53%), Gaps = 6/358 (1%)
Query: 110 IAASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
AA L + SD ++ S LI AY + G ++ AI + ++ + + +L L
Sbjct: 40 FAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHL 99
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPN 225
+++ KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P+
Sbjct: 100 MKLRYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 158
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+++YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D+A L
Sbjct: 159 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 218
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M + G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 219 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 278
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
++A L+ EM +GLKP F++ + + G+LD A K+M Q + + V+Y
Sbjct: 279 DLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYT 338
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
II GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 339 AIISGLC-QEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 395
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 160/291 (54%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F + + SYN+L+ +R+ L E F
Sbjct: 125 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD--LDEGFRLK 182
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK +++A ++FD M VK PN + + T+I+G CK
Sbjct: 183 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 242
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G +++A L+ +M + G K + T+
Sbjct: 243 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTY 302
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G D A + + +++ N+ D +Y +I+G C+ G+ +A +L+EM +
Sbjct: 303 TTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLS 362
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GLKP ++ + + G++ + LLK+M + +P+ +YN ++ G
Sbjct: 363 VGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 138/287 (48%), Gaps = 16/287 (5%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC---- 248
D+ ++ +I Y + G + +A + + + + ++T C+K LE K
Sbjct: 53 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDT-----CRK-VLEHLMKLRYFK 106
Query: 249 -----MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
E++ G + +N +++ C +G + A+ + + G + +V ++ +++
Sbjct: 107 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 166
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G +G D+ ++ + + PDV +Y V+ING CK K D+A L EM +GL
Sbjct: 167 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 226
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +F + +NG +D A+ + KQM LP+ ++YNT+I GLC KG +
Sbjct: 227 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLC-KKGDLNQAHG 285
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
L+D M G D Y+ L+ G C+EG+++ + M+ + RL
Sbjct: 286 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRL 332
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 19/259 (7%)
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGC------------------RPNELTYNAM 267
L +Y TMI+ C EAK + +++R R + ++ +
Sbjct: 1 LHSYCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 60
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I +G + +A R + T + +L+ L + F G+ ++E
Sbjct: 61 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGY 120
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ + ++++ FCK G A S+ + GL+P+V S+N + + G+LD
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L M P+ +Y+ +I GLC + +M D +L D M+ G + ++ L+ G+
Sbjct: 181 LKSAMLASGVQPDVYTYSVLINGLC-KESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 239
Query: 448 CEEGNVENVMQIAHEMVTK 466
C+ G V+ M+I +M+++
Sbjct: 240 CKNGRVDLAMEIYKQMLSQ 258
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 181/341 (53%), Gaps = 5/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI YG G+++ + ++ A + +YN+L+ + ++ A +F ++ ++
Sbjct: 241 LIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQG 300
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
VV +V T++T + +CK G+++ A K+F M V+ PN Y ++++G CK G L++A
Sbjct: 301 VVA-NVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDA 359
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++EM+++G PN +TY M+ GLC G+V EA +++ M G K N + +++ G
Sbjct: 360 IVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHG 419
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+ ++A+ L + M DV Y +I G CK K DEA SLL +M GL+P
Sbjct: 420 HFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPN 479
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ + L + G+ A+ LL ++ PN V+Y +I GLC A G + +
Sbjct: 480 TVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKA-GSISEAISHF 538
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++M G + + Y+ L+ G+C+ G++ M + +EM+ K
Sbjct: 539 NKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDK 579
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 171/341 (50%), Gaps = 5/341 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S + A+ G V+ A+ F Q + ++Y SL+ + + A ++V
Sbjct: 309 STFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 368
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ +VP +V TYT M+ G CK G + A V +M VK N L Y T+I+G E
Sbjct: 369 QGLVP-NVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSE 427
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A +N+M N+G + Y +I+GLC + +VDEAK L+ KM G + N + +++
Sbjct: 428 RALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIM 487
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
L GK +AV L ++++ P+V +Y +I+G CK G EAIS +MR GL
Sbjct: 488 DALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLD 547
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++ A+ + G L++A+ L+ +M + V Y ++I G M + +QD
Sbjct: 548 PNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGY-MKQANLQDAFA 606
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L +MI SG LD Y+C + G+C ++ + EM+
Sbjct: 607 LKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI 647
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 153/282 (54%), Gaps = 2/282 (0%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEE 244
V++ VPP+ T ++ + +++FD++ V PN+ +N +I+ CK+GEL E
Sbjct: 160 VRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPV-PNVFTFNIVIDFLCKEGELVE 218
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A+ M GC P+ +TYN++I G G ++E + L+++MR +G +V T+ +++
Sbjct: 219 ARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALIN 278
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G+ ++A Y + + +V ++ ++ FCK G EA+ L +MR RG+ P
Sbjct: 279 CFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMP 338
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
F++ ++ + G LD AI+LL +M +PN V+Y ++ GLC +G++ + +++
Sbjct: 339 NEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLC-KEGKVAEADNV 397
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M R G + +Y+ L+ G+ N E + + ++M K
Sbjct: 398 LSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNK 439
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 129/274 (47%), Gaps = 39/274 (14%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
DVS Y T+I G CK ++ AK + M ++PN + Y T+++ K G+ EA +
Sbjct: 444 DVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALL 503
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+++++ G +PN +TY A+I GLC G + EA KMR G NV + +++ G C +
Sbjct: 504 HKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKI 563
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G ++A+ + +++ M+ D Y +I+G+ K +A +L +M GL
Sbjct: 564 GSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGL------- 616
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
Q+D Y I G C MQ+ ++ MI
Sbjct: 617 ------------------------QLD----LYCYTCFISGFC-NMNMMQEARGVLSEMI 647
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+G D T+Y+CL++ Y + GN+E + +EM
Sbjct: 648 GTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 4/202 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +++ L + A H+I+ ++ P+V TY +I G CK G I A F+ M
Sbjct: 483 YTTIMDALFKAGKESEAVALLHKIL-DSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM 541
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN+ AY +I+GFCK G L +A MNEM+++G +++ Y ++I G +
Sbjct: 542 RELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANL 601
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A L KM +G + ++ + + G C + +A G L ++ + PD Y +
Sbjct: 602 QDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCL 661
Query: 338 INGFCKIGKSDEAISLLKEMRA 359
I + K+G +EA SL EM +
Sbjct: 662 IRKYQKLGNMEEASSLQNEMES 683
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 172/343 (50%), Gaps = 7/343 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL-LGVLVRVNSIKLAEEFFHQIVKE 187
LI+ + + ++ AA F + +E C S+ L L R + A E F ++
Sbjct: 31 LIRGFCNASDLDAA-FSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLEL 89
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV----KPNLLAYNTMINGFCKKGELE 243
PDV +YTT+I G CK+G ++ A +F M +PN YN +++G CK+ L+
Sbjct: 90 AHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLD 149
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A+ + E R P+ +TYN ++ L GRVDEA +M G+ + + +++
Sbjct: 150 AARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAII 209
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GLC + A+ +++ + +P++ +Y VVI+G CK + DEA LL M + G +
Sbjct: 210 TGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCR 269
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + ++ + G LD A+ LL++M C+P+ V+Y +I LC GR+ D +
Sbjct: 270 PDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV-GRVDDAHE 328
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ ++ + + + YS L+ GYC V+ ++ EM +
Sbjct: 329 IFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR 371
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 154/293 (52%), Gaps = 12/293 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ LI G V AA F K + G C ++YN+L+ L + + + A +
Sbjct: 100 TTLINGLCKLGRVDAAFDLFR--KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITE 157
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
K + P DV TY T++ ++G ++ A F MT + P L+++N +I G C+
Sbjct: 158 ARKRDFAP-DVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRAR 216
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
L +A + NEM++R PN +TY+ +I GLC + ++DEA+ L+ +M G + ++ +
Sbjct: 217 RLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYT 276
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ G G+ D A+G LR ++ PDV +Y VVI+ CK+G+ D+A + +E+ A
Sbjct: 277 PLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVAN 336
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
P V +++A+ +D K M +M C PN V+YNT+I GL M
Sbjct: 337 KCSPNVVTYSALIGGYCRASRVDEGG---KVMREMACRPNVVTYNTMIWGLSM 386
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 161/313 (51%), Gaps = 7/313 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD- 218
+YN L+ + + A ++ E + D +T + +++G C+ G + A + FD
Sbjct: 27 TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTT-SIILQGLCRCGRVAQALEHFDA 85
Query: 219 ---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLCIN 274
+ +P++++Y T+ING CK G ++ A +M+ G CRPN TYNA++ GLC
Sbjct: 86 SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+D A+ ++ + R F +V T+ +++ L +G+ D+A+ + E P + S+
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G C+ + +A+ + EM R P + +++ V L ++ +LD A LL +M
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ V+Y ++ G A GR+ L+ RM+ G D Y+ ++ C+ G V+
Sbjct: 266 EGCRPDLVAYTPLVLGF-SAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVD 324
Query: 455 NVMQIAHEMVTKK 467
+ +I E+V K
Sbjct: 325 DAHEIFRELVANK 337
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 129/245 (52%), Gaps = 3/245 (1%)
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA-KMLMA 285
+ YN +I GFC +L+ A + EM G + N+ T + ++ GLC GRV +A + A
Sbjct: 26 VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPDVKSYEVVINGFCKI 344
+ L + +V ++ +++ GLC +G+ D A R ++ A P+ +Y +++G CK
Sbjct: 86 SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
+ D A +++ E R R P V ++N + L + G +D A+ QM + +P VS+
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
N II GLC A+ R+ D ++ + MI + + YS ++ G C+ ++ Q+ MV
Sbjct: 206 NAIITGLCRAR-RLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 264
Query: 465 TKKGR 469
++ R
Sbjct: 265 SEGCR 269
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 149/309 (48%), Gaps = 23/309 (7%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFF-----ISKLIKAYGDRGNVKAAIFWFHQA 149
Y A+ D L + A +++ + K DF + L+ A G V A+ F Q
Sbjct: 135 YNALVDGLCKQDRLDAARAVITEARK-RDFAPDVVTYNTLMAALFQLGRVDEALATFTQM 193
Query: 150 KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
+ L S+N+++ L R + A E F++++ + P++ TY+ +I G CK
Sbjct: 194 TEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF-HPNLVTYSVVIDGLCKSDQ 252
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
++ A+++ D M +P+L+AY ++ GF G L+ A + M+++GC P+ +TY
Sbjct: 253 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 312
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I LC GRVD+A + ++ N NV T+ +++ G C + D+ +R E
Sbjct: 313 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR---EMA 369
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
P+V +Y +I G + +++EA + +EM G P ++ L RA+
Sbjct: 370 CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRG----------LKRAL 419
Query: 387 LLLKQMPQM 395
++ Q P +
Sbjct: 420 RMIDQPPHV 428
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 210/454 (46%), Gaps = 55/454 (12%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA---- 111
++V KVI+ +P A F WA + K+ H + V + + A
Sbjct: 70 DLVGKVIHRIPDPNTAWEVFQWAGKQS----KFTHNRFTCNNLLSVYVKARRVEDAHLFF 125
Query: 112 ASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG-ACLYSYNSLLGVLVR 170
S +KN + + + L+ + G+VK A+ F + K ++G A L S+N +L L
Sbjct: 126 QSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMK--DSGIAVLRSHNIVLRGLCS 183
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLL 227
I +A E F + + P++ +YT MI G CK ++ A +F M K P+++
Sbjct: 184 GGKISMAWEVFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVV 241
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD--------- 278
Y +I+G K+ ++EA E +GC P +TYN MI GLC GR++
Sbjct: 242 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301
Query: 279 ---------------------------EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
+A L +M G +V T+ ++L GLC G
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGC 361
Query: 312 FDQAVGYLRNVMEANM-NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
D+A+ R + N+ +P+V +Y V+I+ FCK+ + +A+ L KEM R L P +F
Sbjct: 362 EDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFT 421
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
V + L + +D A L + + + C P+ V +NT++ G C R+ D + L DRM+
Sbjct: 422 TVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKIT-RIDDAKKLHDRMLD 479
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
SG Y+ L+ G+C G + + + HEM+
Sbjct: 480 SGCAPTLATYTALVTGFCRTGRYSDALIMYHEMI 513
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 163/324 (50%), Gaps = 15/324 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN+L+ + +K A F ++ + + ++ ++RG C G I A +VF
Sbjct: 139 SYNTLMNGFFKAGDVKKALALFGEMKDSGIAV--LRSHNIVLRGLCSGGKISMAWEVFKD 196
Query: 220 MT--VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
M+ PNL++Y MI+G CK ++++A +M+++ P+ +TY A+I GL RV
Sbjct: 197 MSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRV 256
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG-YLRNVMEANMNPDVKSYEV 336
EA L + R G V T+ +M+ GLC G+ + A+ Y V E ++ PD+ +Y
Sbjct: 257 KEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSA 316
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING + ++A L +EM G P V ++N + L ++G D+A+ + ++M +
Sbjct: 317 LINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGN 376
Query: 397 -CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL--DFTMYSCLLKGYCEEGNV 453
C PN ++Y +I C R+ D L M G +L D ++ +++ C+E +
Sbjct: 377 VCDPNVITYTVLIDRFCKVD-RLGDAVKLAKEM--EGRSLLPDAVTFTTVIQKLCKESRI 433
Query: 454 ENVMQIAHEMVTKKGRLLKLKNFL 477
+ AHE+ G+ K + L
Sbjct: 434 DE----AHELFESIGKTCKPDSVL 453
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 146/341 (42%), Gaps = 43/341 (12%)
Query: 102 LLSHSLISIAASLLKN-SNKLSDFFISKLIKAYG--DRGNVKAAIFWFHQAKQIENGACL 158
L S IS+A + K+ S S IS I G V AI F Q +
Sbjct: 181 LCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDV 240
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+Y +L+ L + +K A + F + + P V TY TMI G CK G IENA ++D
Sbjct: 241 VTYGALIDGLGKQRRVKEAYDLFEE-ARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYD 299
Query: 219 VMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M +KP++ Y+ +ING E+A + EM++ GC P+ +TYN ++ GLC +
Sbjct: 300 DMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKS 359
Query: 275 GRVDEAKMLMAKMRLNGFKD-NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G D+A + KM + D NV T+ ++ C V + AV + + ++ PD +
Sbjct: 360 GCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVT 419
Query: 334 YEVVIN----------------------------------GFCKIGKSDEAISLLKEMRA 359
+ VI G+CKI + D+A L M
Sbjct: 420 FTTVIQKLCKESRIDEAHELFESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLD 479
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
G PT+ ++ A+ G A+++ +M +M P
Sbjct: 480 SGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 98/181 (54%), Gaps = 4/181 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+LL L + A E F ++ NV P+V TYT +I +CK+ + +A K+
Sbjct: 348 TYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKE 407
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ P+ + + T+I CK+ ++EA + + E + + C+P+ + +N M+ G C R
Sbjct: 408 MEGRSLLPDAVTFTTVIQKLCKESRIDEAHE-LFESIGKTCKPDSVLFNTMLAGYCKITR 466
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D+AK L +M +G ++T+ +++ G C G++ A+ ++E P+ E+
Sbjct: 467 IDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHLAEL 526
Query: 337 V 337
V
Sbjct: 527 V 527
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 191/395 (48%), Gaps = 42/395 (10%)
Query: 107 LISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLG 166
L S+ A N N D + LI +G R + A ++F++ + A +YSYNS++
Sbjct: 387 LFSVMAERGLNPN---DVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMIN 443
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VK 223
+ +K+AE F ++V + + P V+TYT++I GYCK G++ A K++ MT +
Sbjct: 444 CQCKFGKMKMAELLFKEMVDKG-LKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIA 502
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN + + +I G C+ ++ EA K +EM+ PNE+TYN +I G C G A L
Sbjct: 503 PNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFEL 562
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +M G + T++ ++ GLC G+ +A ++ ++ + D Y ++ GFCK
Sbjct: 563 LDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCK 622
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSF------------------------------NAVF 373
G+ EA+ +EM RGL+ + S+ N ++
Sbjct: 623 EGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIY 682
Query: 374 RILVE----NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
IL++ +G L +A M +PN V+Y ++ GL A G + + + L RM+
Sbjct: 683 TILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKA-GYVNEAKLLFKRML 741
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ Y C L +EGN+EN +Q+ + M+
Sbjct: 742 VGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML 776
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 163/321 (50%), Gaps = 5/321 (1%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
A L +Y +L+ L R+ ++ E ++++ VP + + + +I G KMG IE A +
Sbjct: 293 ADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAV-SGLIEGLIKMGSIEGAFE 351
Query: 216 VFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ + + V PNL YN+MIN CK G+LEEA+ + M RG PN++TY +I G
Sbjct: 352 LLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFG 411
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
++D A KM G V ++ SM+ C GK A + +++ + P V
Sbjct: 412 RRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVA 471
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y +I+G+CK G +A L EM +G+ P +F A+ L + ++ A L +M
Sbjct: 472 TYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEM 531
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
++ LPN V+YN +I G C +G +L+D MI+ G + D Y L+ G C G
Sbjct: 532 VELKILPNEVTYNVLIEGHC-REGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGR 590
Query: 453 VENVMQIAHEMVTKKGRLLKL 473
V + +++ K RL +L
Sbjct: 591 VSEAKEFINDLHHKHQRLDEL 611
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 154/346 (44%), Gaps = 40/346 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA---KK 215
Y Y ++ L + A+E +Q + N + TY I G CK + A K+
Sbjct: 226 YIYTVVVKCLCELKDFNKAKEIINQ-AEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKR 284
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+K +L+ Y T++ G C+ E E + M+EM+ G P+E + +I GL G
Sbjct: 285 SLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMG 344
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++ A L+ K+ G N+ + SM+ LC GK ++A + E +NP+ +Y
Sbjct: 345 SIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYT 404
Query: 336 VVINGF-----------------------------------CKIGKSDEAISLLKEMRAR 360
++I+GF CK GK A L KEM +
Sbjct: 405 ILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDK 464
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GLKPTV ++ ++ ++G + +A L +M PN V++ +ICGLC +M +
Sbjct: 465 GLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQIN-KMAE 523
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L D M+ + Y+ L++G+C EGN ++ EM+ K
Sbjct: 524 ASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKK 569
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 193/441 (43%), Gaps = 72/441 (16%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK-------NSNKL-S 122
AL FFN+ +HH+T + + LL ++L A+SLL+ N +++
Sbjct: 86 ALRFFNFLGLHR----NFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFE 141
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
+FF S + I + Q K++ +G VLV VN
Sbjct: 142 NFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDG-----------VLV-VN---------- 179
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
++++ + P+V T + ++ ++ ++FD + VKP+ Y ++ C+
Sbjct: 180 -LMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCEL 238
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+ +AK+ +N+ GC + +TYN I GLC + RV EA + + G K ++ T+
Sbjct: 239 KDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTY 298
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ GLC + +F+ + + ++E P + +I G K+G + A LL ++
Sbjct: 299 CTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGK 358
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII----------- 408
G+ P +F +N++ L + G+L+ A LL M + PN V+Y +I
Sbjct: 359 LGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDV 418
Query: 409 ----------CGL------------CMAK-GRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
CG+ C K G+M+ E L M+ G Y+ L+
Sbjct: 419 AFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLIS 478
Query: 446 GYCEEGNVENVMQIAHEMVTK 466
GYC++G V ++ HEM K
Sbjct: 479 GYCKDGLVPKAFKLYHEMTGK 499
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 152/338 (44%), Gaps = 11/338 (3%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLKN----SNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
T Y + L S +S A + + +L + + L++ + G +K A+
Sbjct: 575 TYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQ 634
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ L SY L+ + N ++ E ++ + + P +V YT +I G+ K
Sbjct: 635 EMVGRGLQMDLVSYAVLISGALNQND-RILFELLREMHGKGMQPDNV-IYTILIDGFIKS 692
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G ++ A + + +M + PN + Y ++NG K G + EAK M+ PN +TY
Sbjct: 693 GNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITY 752
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+ L G ++ A L M L G N T+ +++G C +GKF +A L ++
Sbjct: 753 GCFLDHLTKEGNMENALQLHNAM-LQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIG 811
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
M PD +Y I +CK G D A+ + + M RGLKP FN + NGELDR
Sbjct: 812 IGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDR 871
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
A+ L M P +Y++++ L + R+ V+
Sbjct: 872 ALQLRNDMMLRGLKPTQSTYHSLMVQLA-QRARLTQVQ 908
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 189/358 (52%), Gaps = 9/358 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT++ +L + +S A +L++ L + +I + +G++ AA F + +
Sbjct: 325 YTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQ 384
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ A ++ +L+ L R +K A+ ++V + + DV TYT +I GYCK G +
Sbjct: 385 KRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGL-DVDVVTYTVLIDGYCKRGNM 443
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A +V + M V PN++ Y + +G CK+G++ A + ++EM N+G N TYN++
Sbjct: 444 VEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSL 503
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC G +++A +M +M G + +V T+ +++ LC G+FD+A L+ +++ +
Sbjct: 504 INGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGI 563
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P + +Y V++NGFC G+ + LL+ M + ++P V ++N++ + + +
Sbjct: 564 KPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTE 623
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ K M + PN +YN +I G C A+ M++ MI G L + YS L++
Sbjct: 624 IYKGMHSQEVAPNENTYNILIKGHCKARN-MKEALYFHQEMIEKGLRLTASSYSALIR 680
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 158/310 (50%), Gaps = 8/310 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S+N LL L+ +K A + F ++ PPDV TY TM+ GYC G +ENA K+ D
Sbjct: 257 SHNILLKALLSAGRLKDACQHFDEMSS----PPDVVTYGTMVHGYCVRGELENAVKLLDE 312
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K N Y ++I C KG++ +A + + +M G + + + +I G C G
Sbjct: 313 MAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGD 372
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ A+ L +M+ G + TH +++ GLC G+ +A L+ +++ ++ DV +Y V
Sbjct: 373 LAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTV 432
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+CK G EA + EM R + P V ++ A+ L + G++ A LL +M
Sbjct: 433 LIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG 492
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
N +YN++I GLC G ++ ++ M +GH D Y+ L+ C+ G +
Sbjct: 493 LELNVYTYNSLINGLCKF-GNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRA 551
Query: 457 MQIAHEMVTK 466
+ EM+ K
Sbjct: 552 HNMLQEMLDK 561
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 160/300 (53%), Gaps = 5/300 (1%)
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYN 230
+ A F ++ K + D T+T +I G C+ G ++ A +V M K +++ Y
Sbjct: 373 LAAARRLFEEMQKRGLAA-DRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYT 431
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+I+G+CK+G + EA + NEM+ R PN +TY A+ GLC G V A L+ +M
Sbjct: 432 VLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNK 491
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G + NV T+ S++ GLC G +QA+ + + A DV +Y +I+ CK G+ D A
Sbjct: 492 GLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRA 551
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
++L+EM +G+KP++ ++N + +G ++ LL+ M + + PN V+YN+++
Sbjct: 552 HNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQ 611
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
C+ K M+ ++ M + Y+ L+KG+C+ N++ + EM+ K RL
Sbjct: 612 YCIDKN-MKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRL 670
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 4/267 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y RGN+ A ++ + +Y +L L + ++ A E H++ +
Sbjct: 433 LIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG 492
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEA 245
+ +V TY ++I G CK G +E A ++ M + ++ Y T+I+ CK GE + A
Sbjct: 493 L-ELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRA 551
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ EM+++G +P+ TYN ++ G C++GRV+ K L+ M + NV T+ S++K
Sbjct: 552 HNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQ 611
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C+ + + + P+ +Y ++I G CK EA+ +EM +GL+ T
Sbjct: 612 YCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLT 671
Query: 366 VFSFNAVFRILVENGELDRAILLLKQM 392
S++A+ R+L + + A + +M
Sbjct: 672 ASSYSALIRLLNKKKKFSEARVFFDKM 698
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 8/234 (3%)
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
N + L+EA E+ ++ N ++N ++ L GR+ +A +M
Sbjct: 232 NAVLSRLPLDEAIALFRELPDK----NVCSHNILLKALLSAGRLKDACQHFDEM---SSP 284
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+V T+ +M+ G CV G+ + AV L + + + Y VI C G+ +A+ +
Sbjct: 285 PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRV 344
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
L++M G+ F V G+L A L ++M + + V++ +I GLC
Sbjct: 345 LEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCR 404
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
A G +++ + ++ M+ G ++D Y+ L+ GYC+ GN+ ++ +EMV ++
Sbjct: 405 A-GELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRR 457
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
+ LL+ +R GL P+ S NAV L LD AI L +++P N S+N ++
Sbjct: 212 SAELLRRLRQYGLSPSPESCNAVLSRL----PLDEAIALFRELPDK----NVCSHNILLK 263
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L ++ GR++D D M D Y ++ GYC G +EN +++ EM K
Sbjct: 264 AL-LSAGRLKDACQHFDEMSSPP---DVVTYGTMVHGYCVRGELENAVKLLDEMAAK 316
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 180/344 (52%), Gaps = 9/344 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ L++ + + G+++AA+ +AK +E G + N L+ ++ ++ A + Q
Sbjct: 236 TTLMQGFIEEGSIEAALRV--KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQE 293
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+ + PD TY T + G C+ G + +A KV D+M + P++ YNT+IN K GE
Sbjct: 294 IADGF-EPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 352
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L+EAK +N+M++RGC P+ T+N +I L R++EA L ++ + G +V T
Sbjct: 353 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNI 412
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ LC VG + + + PD +Y ++I+ C +GK A+ LL EM + G
Sbjct: 413 LINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ ++N + L + ++ A + QM + V++NT+I GLC AK R+ D
Sbjct: 473 CPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAK-RIDDA 531
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+L+++M++ G + Y+ +L YC++GN++ I M
Sbjct: 532 TELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTA 575
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 163/316 (51%), Gaps = 5/316 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N L+ L +V L F ++ K + PD TY +I C MG + NA +
Sbjct: 407 VYTFNILINALCKVGDPHLGIRLFEEM-KSSGCTPDEVTYNILIDHLCSMGKLGNALDLL 465
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + + YNT+I+ CKK +EEA++ ++M +G + +T+N +I GLC
Sbjct: 466 NEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKA 525
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+D+A L+ +M G + N T+ S+L C G +A L + DV +Y
Sbjct: 526 KRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTY 585
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ING CK G++ A+ LL+ MR +G++PT ++N V + L L A+ L ++M +
Sbjct: 586 GTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTE 645
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ P+ ++Y + LC G +++ D + M+ G +F+ + L +G G ++
Sbjct: 646 VGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG-MD 704
Query: 455 NVMQIAHEMVTKKGRL 470
+ + A E++ +K +
Sbjct: 705 DYLISAIELIIEKAKF 720
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 190/442 (42%), Gaps = 51/442 (11%)
Query: 31 LNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHH 90
L PQ P + PL +++ ++ + EQ++P AL N A +
Sbjct: 34 LRPQ-PRRRGHRPAPLRVYAISDQDRLLA-ALREQSDPEAALRMLNSALARE----DFAP 87
Query: 91 TTPCYTAITDVLLSHSLISIAASLLKN----SNKLSDFFISKLIKAYGDRGNVKAAIFWF 146
++ Y I L + + L++ +++ + +++Y A+
Sbjct: 88 SSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLV 147
Query: 147 HQAKQIENG-----ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
Q++N A +N LL VLV + +KL E ++++
Sbjct: 148 --LNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTG--------------- 190
Query: 202 RGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
RG ++P+++ NT+I C+ ++ A + EM + G P+E
Sbjct: 191 RG------------------IQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDE 232
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
T+ ++ G G ++ A + AKM G T ++ G C +G+ + A+GY++
Sbjct: 233 TTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQ 292
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ PD +Y ++G C+ G A+ ++ M G P VF++N V L +NGE
Sbjct: 293 EIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 352
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
LD A ++ QM CLP+ ++NT+I L ++ R+++ DL + G + D ++
Sbjct: 353 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALS-SQNRLEEALDLARELTVKGLSPDVYTFN 411
Query: 442 CLLKGYCEEGNVENVMQIAHEM 463
L+ C+ G+ +++ EM
Sbjct: 412 ILINALCKVGDPHLGIRLFEEM 433
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 172/348 (49%), Gaps = 11/348 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS-YNSLLGVLVRVNSIKLAEEFFHQIV 185
+L+ A ++ + +AA+ + A E+ A + Y ++ L + L E ++
Sbjct: 57 DRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMR 116
Query: 186 KEN------VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKK 239
+E VV V +Y + R + ++ N D V+ + + +N ++N +
Sbjct: 117 REGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLD-NDTFGVQADTVVFNHLLNVLVEG 175
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+L+ + NEM RG +P+ +T N +I LC +V A +++ +M +G + +T
Sbjct: 176 SKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTF 235
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++++G G + A+ +MEA +P + V+ING+CK+G+ ++A+ +++ A
Sbjct: 236 TTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIA 295
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-GRM 418
G +P ++N L +NG + A+ ++ M Q P+ +YNT+I C++K G +
Sbjct: 296 DGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVIN--CLSKNGEL 353
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + +V++M+ G D T ++ L+ + +E + +A E+ K
Sbjct: 354 DEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVK 401
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 166/306 (54%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ L + + A +F+ ++ + P DV TY+T+I G+C G + A + + M
Sbjct: 275 YNTIIDGLCKDKLVNEAYDFYTEMNSRGIFP-DVITYSTLICGFCLAGQLMGAFSLLNEM 333
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
T+K P++ Y +I+ CK+G+L+EAK + M G +PN +TY+ ++ G C+ G V
Sbjct: 334 TLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEV 393
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
AK + M +V ++ M+ GLC D+A+ LR ++ N+ P+ +Y +
Sbjct: 394 HNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSL 453
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G CK G+ A+ L+KE+ RG V ++ ++ L +N LD+AI L +M +
Sbjct: 454 IDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGI 513
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +Y +I GLC R+++ + L ++ G +D Y+ ++ G C+EG ++ +
Sbjct: 514 QPNKYTYTALIDGLCKG-ARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEAL 572
Query: 458 QIAHEM 463
+ +M
Sbjct: 573 AMKSKM 578
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 169/345 (48%), Gaps = 9/345 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDF----FISKLIKAYGDRGNVKAAIFWFHQAK 150
Y I D L L++ A N F S LI + G + A ++
Sbjct: 275 YNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMT 334
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+Y+Y L+ L + +K A+ + KE V P+V TY+T++ GYC +G +
Sbjct: 335 LKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGV-KPNVVTYSTLMDGYCLVGEV 393
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
NAK++F M V P++ +YN MING CK ++EA + EM+++ PN +TYN++
Sbjct: 394 HNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSL 453
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC +GR+ A LM ++ G +V T+ S+L GLC D+A+ + E +
Sbjct: 454 IDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGI 513
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P+ +Y +I+G CK + A L + + +G V+++N + L + G LD A+
Sbjct: 514 QPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALA 573
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ +M C+P+ V++ II L K E L+ MI G
Sbjct: 574 MKSKMEDNGCIPDAVTFEIIIRSL-FEKDENDKAEKLLHEMIAKG 617
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 141/276 (51%), Gaps = 4/276 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENA---KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
P + + ++ KM A K +V ++P+L+ + +IN FC G++ +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +++ G +PN + ++ GLC+ G V ++ K+ GF+ N ++ ++L GLC
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+G+ A+ LR + + + PDV Y +I+G CK +EA EM +RG+ P V +
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++ + G+L A LL +M + P+ +Y +I LC +G++++ ++L+ M
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALC-KEGKLKEAKNLLGVM 368
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ G + YS L+ GYC G V N QI H MV
Sbjct: 369 TKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMV 404
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 176/398 (44%), Gaps = 75/398 (18%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V A+ F+ + N + + +LG LV++ A Q+ + + PD+ T +
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGI-EPDLVTLS 171
Query: 199 TMIRGYCKMGMIENAKKVFD------------VMTV------------------------ 222
+I +C +G + + V ++T
Sbjct: 172 ILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQ 231
Query: 223 --KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
+ N ++Y T++NG CK GE A K + + +R RP+ + YN +I GLC + V+EA
Sbjct: 232 GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEA 291
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+M G +V T+ +++ G C+ G+ A L + N+NPDV +Y ++I+
Sbjct: 292 YDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA 351
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNA----------------VFRILVE------ 378
CK GK EA +LL M G+KP V +++ +F +V+
Sbjct: 352 LCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPS 411
Query: 379 --------NG-----ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
NG +D A+ LL++M + +PN V+YN++I GLC + GR+ DL+
Sbjct: 412 VCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKS-GRITSALDLM 470
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G D Y+ LL G C+ N++ + + +M
Sbjct: 471 KELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKM 508
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 144/299 (48%), Gaps = 13/299 (4%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----KNSNKLSDFFI 126
A N + N NP+ Y YT + D L + A +LL K K +
Sbjct: 326 AFSLLNEMTLKNINPDVY-----TYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTY 380
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ Y G V A FH Q E + SYN ++ L + S+ A +++
Sbjct: 381 STLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLH 440
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+NVVP V TY ++I G CK G I +A + + + +++ Y ++++G CK L+
Sbjct: 441 KNVVPNTV-TYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLD 499
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A +M RG +PN+ TY A+I GLC R+ A+ L + + G +V T+ M+
Sbjct: 500 KAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMI 559
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
GLC G D+A+ + + PD ++E++I + ++D+A LL EM A+GL
Sbjct: 560 GGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 36/248 (14%)
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+M P+++ + ++ K A +M +G P+ +T + +I C G++
Sbjct: 125 LMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMA 184
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+ ++ K+ G++ N +++KGLC+ G+ +++ + V+ + SY ++
Sbjct: 185 FSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLL 244
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG CKIG E R AI LL+ +
Sbjct: 245 NGLCKIG----------ETRC-------------------------AIKLLRMIEDRSTR 269
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P+ V YNTII GLC K + + D M G D YS L+ G+C G +
Sbjct: 270 PDVVMYNTIIDGLCKDK-LVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFS 328
Query: 459 IAHEMVTK 466
+ +EM K
Sbjct: 329 LLNEMTLK 336
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 200/395 (50%), Gaps = 44/395 (11%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
S+ A +LK ++ LIK +G VK A+ FH K + G L SY +L+
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH-FHD-KLLAQGFQLNQVSYGTLIN 172
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
+ ++ + A + +I + P+V Y+T+I CK ++ A +F MTVK
Sbjct: 173 GVCKIGDTRAAIKLLQKI-DGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 231
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
+++ Y+T+I GFC +G+L+EA +NEM+ + PN TYN ++ LC G+V EAK +
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+A M K +V T+ +++ G +V + +A + + PDV +Y ++INGFCK
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 351
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVF-------RI--------------------- 375
DEA++L KEM + + P + +++++ RI
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVIT 411
Query: 376 -------LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
L +NG LDRAI L +M PN ++ ++ GLC GR++D +++ +
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKG-GRLKDAQEVFQDL 470
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G++L+ Y+ ++ G+C++G +E + + +M
Sbjct: 471 LTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKM 505
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 166/324 (51%), Gaps = 8/324 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKN---SNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ I D L + L+S A L +D S LI + G +K AI ++
Sbjct: 202 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+Y+YN L+ L + +K A+ ++K V PDV TY+T++ GY + +
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA-CVKPDVITYSTLMDGYFLVYEV 320
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ VF+ M+ V P++ Y +INGFCK ++EA EM + P +TY+++
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC +GR+ L+ +M G NV T+ S++ GLC G D+A+ + + +
Sbjct: 381 IDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGI 440
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P+ ++ ++++G CK G+ +A + +++ +G V+++N + + G L+ A+
Sbjct: 441 RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALT 500
Query: 388 LLKQMPQMDCLPNFVSYNTIICGL 411
+L +M C+P+ V++ II L
Sbjct: 501 MLSKMEDNGCIPDAVTFEIIIIAL 524
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 187/399 (46%), Gaps = 75/399 (18%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
NV A+ F++ + + + +N +L ++ A H++ + + PD+ T
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGI-QPDLITL 97
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+I +C MG I V + + P+ + NT+I G C KG++++A ++++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 255 RGCRPNELTYNAMIYGLC--------------INGR---------------------VDE 279
+G + N+++Y +I G+C I+GR V E
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L ++M + G +V T+ +++ G C+ GK +A+G L ++ +NP+V +Y ++++
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFS--------------------FNAV------- 372
CK GK EA S+L M +KP V + FNA+
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337
Query: 373 ----FRILV----ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ IL+ +N +D A+ L K+M Q + +P V+Y+++I GLC + GR+ V DL
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS-GRIPYVWDL 396
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+D M G + YS L+ G C+ G+++ + + ++M
Sbjct: 397 IDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKM 435
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 125/240 (52%), Gaps = 6/240 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L++ N L+ + I +I+K PD T+TT+I G C G + A
Sbjct: 961 LFTLNILINCFCHMGQITFNFSILAKILKRGY-HPDTITFTTLINGLCLKGQVNKALHFH 1019
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D + + N ++Y T+ING CK G+ A K + ++ R +P+ + YN +I LC +
Sbjct: 1020 DKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKH 1079
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
V +A L +M + G +V T+ +++ G C+VGK +A+G L ++ +NP+V++Y
Sbjct: 1080 QLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTY 1139
Query: 335 EVVINGFCKIGKS--DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
++++ CK GK DE++S+L +M G K +F + L E E D+ LL +M
Sbjct: 1140 NILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEM 1199
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 124/251 (49%), Gaps = 1/251 (0%)
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
++ ++P+L N +IN FC G++ + +++ RG P+ +T+ +I GLC+ G+
Sbjct: 952 LELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQ 1011
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++A K+ GF+ N ++ +++ G+C +G A+ LR + PDV Y
Sbjct: 1012 VNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNT 1071
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ CK +A L EM +G+ V ++N + G+L AI LL +M
Sbjct: 1072 IIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKT 1131
Query: 397 CLPNFVSYNTIICGLCM-AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
PN +YN ++ LC K + + ++ +M +G + + ++ E+ +
Sbjct: 1132 INPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDK 1191
Query: 456 VMQIAHEMVTK 466
V ++ HEM+ +
Sbjct: 1192 VEKLLHEMIAR 1202
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 124/248 (50%), Gaps = 6/248 (2%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
+ PD+ T +I +C MG I + + + P+ + + T+ING C KG++ +A
Sbjct: 957 IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKAL 1016
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
++++ +G + N+++Y +I G+C G A L+ K+ K +V + +++ L
Sbjct: 1017 HFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDAL 1076
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C +A G + ++ DV +Y +I GFC +GK EAI LL +M + + P V
Sbjct: 1077 CKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNV 1136
Query: 367 FSFNAVFRILVENGE--LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++N + L + G+ LD ++ +L +M C N V++ II L K VE L
Sbjct: 1137 RTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL-FEKDENDKVEKL 1195
Query: 425 VDRMIRSG 432
+ MI G
Sbjct: 1196 LHEMIARG 1203
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 6/208 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
++ +L+ L + A F +++ + VS Y T+I G CK+G A K+
Sbjct: 998 TFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVS-YGTLINGVCKIGDTRAAIKLLRK 1056
Query: 218 -DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
D KP+++ YNT+I+ CK + +A EM +G + +TYN +IYG CI G+
Sbjct: 1057 IDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGK 1116
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK--FDQAVGYLRNVMEANMNPDVKSY 334
+ EA L+ KM L NV T+ ++ LC GK D+++ L + + + ++
Sbjct: 1117 LKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTF 1176
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGL 362
E++I+ + ++D+ LL EM ARGL
Sbjct: 1177 EIIISALFEKDENDKVEKLLHEMIARGL 1204
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M P ++ +N +++ F K A + + +G +P+ +T N +I C G++
Sbjct: 53 MRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITF 112
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
++AK+ G+ + T +++KGLC+ G+ +A+ + ++ + SY +IN
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLIN 172
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G CKIG + AI LL+++ R K P
Sbjct: 173 GVCKIGDTRAAIKLLQKIDGRLTK-----------------------------------P 197
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
N V Y+TII LC + + + L M G + D YS L+ G+C EG ++ + +
Sbjct: 198 NVVMYSTIIDALCKYQ-LVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGL 256
Query: 460 AHEMVTK 466
+EMV K
Sbjct: 257 LNEMVLK 263
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 4/199 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + V A+ F + Q + +Y+SL+ L + I + ++ +
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM-HDR 403
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P +V TY+++I G CK G ++ A +F+ M ++PN + +++G CK G L++A
Sbjct: 404 GQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDA 463
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ +++ +G N TYN MI G C G ++EA +++KM NG + T + ++
Sbjct: 464 QEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIA 523
Query: 306 LCVVGKFDQAVGYLRNVME 324
L + VG+ + V E
Sbjct: 524 LFKKDENGGNVGFDKKVWE 542
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 7/158 (4%)
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
+ AV + + PD+ + ++IN FC +G+ S+L ++ RG P +F
Sbjct: 942 YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTT 1001
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM---AKGRMQDVEDLVDRM 428
+ L G++++A+ ++ N VSY T+I G+C + ++ + + R+
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ D MY+ ++ C+ V + EM K
Sbjct: 1062 TKP----DVVMYNTIIDALCKHQLVSKAYGLFFEMNVK 1095
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 169/314 (53%), Gaps = 8/314 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L + A E ++ V PD+ TY+T+I G+CK G ++ A ++
Sbjct: 11 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70
Query: 220 MTVK----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + P+++ Y ++++G C+ G+++ A + + EM +G P++ T++A+I G C
Sbjct: 71 MVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 130
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV---MEANMNPDVK 332
+VDEA L ++ + + + + +++ GLC + +A + + + PDV
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVV 190
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y +I+GFCK G ++A+ +L M R P V +++++ L + G+LD+A+ L ++M
Sbjct: 191 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 250
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
C+PN V+Y T+I GLC A ++ L+D M + D Y+ LL GYC G
Sbjct: 251 TSKGCVPNVVTYTTLIHGLCAAH-KVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309
Query: 453 VENVMQIAHEMVTK 466
+E Q+ EM K
Sbjct: 310 IEEAKQLFKEMAAK 323
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 190/390 (48%), Gaps = 58/390 (14%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ LI + GN++ A+ +E C+ +Y+SLL L + + A + F +
Sbjct: 193 TALIDGFCKSGNLEKAMKMLGV---MEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+ + VP +V TYTT+I G C ++ A+ + D MT + ++YN +++G+C+ G
Sbjct: 250 MTSKGCVP-NVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLG 308
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD------ 294
+EEAK+ EM + C P+ +TY ++ G C R++EA+ L+ M+ D
Sbjct: 309 RIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTY 368
Query: 295 ------------------------------NVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N T+ S++ GLC G+ + A+ L+NV +
Sbjct: 369 SIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK 428
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
PDV +Y +VI G C +++EA++LL+EM + ++P+V +FN+V L G++D
Sbjct: 429 ----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDE 484
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR------SGHNL-DF 437
A LL M P V+Y T++ G GRM+ +L + M R S NL
Sbjct: 485 AWKLLVAMAAHGLEPGMVTYTTLLEGFSRT-GRMEIAYELFEVMRRKAKKSSSAANLVPE 543
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+S L++G C+ ++ M + E+ +++
Sbjct: 544 QAFSALIRGLCKAREIDKAMAVVEELRSRE 573
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 183/363 (50%), Gaps = 27/363 (7%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y++++ + + A E ++V + + PDV TYT+++ G C+ G ++ A ++
Sbjct: 45 LVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMV 104
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M +K P+ ++ +I G+C +++EA K E++ CR + ++ +A+I GLC
Sbjct: 105 REMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRE 164
Query: 275 GRVDEAKMLMAKMRL---NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN-PD 330
R+ EA L +M + +K +V T+ +++ G C G ++A+ L VME P+
Sbjct: 165 RRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKML-GVMEGRKCVPN 223
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V +Y +++G CK G D+A+ L + M ++G P V ++ + L ++D A LL+
Sbjct: 224 VVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMD 283
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M C + VSYN ++ G C GR+++ + L M D Y+CL++G+C
Sbjct: 284 EMTATCCPADTVSYNALLDGYCRL-GRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNA 342
Query: 451 GNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMW--IVTGGSWISRFV----FVHQ 504
+E + M T G +D ++ + +V G S RFV F+ +
Sbjct: 343 SRLEEARFLLENMKTAAG------------IDPDVVTYSIVVAGYSRAKRFVEAAEFIQE 390
Query: 505 VVV 507
++
Sbjct: 391 MIA 393
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 156/319 (48%), Gaps = 52/319 (16%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN+LL R+ I+ A++ F ++ ++ +P D TYT ++RG+C +E A+ + +
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLFKEMAAKSCLP-DRITYTCLVRGFCNASRLEEARFLLEN 354
Query: 220 MT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + P+++ Y+ ++ G+ + EA + + EM+ R PN +TY+++I GLC G
Sbjct: 355 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
RV+ A ++ N K +V T+ +++GLC + ++A+ L ++ + P V ++
Sbjct: 415 RVNHAMEVLK----NVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFN 470
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFS--------------------------- 368
VI C++G DEA LL M A GL+P + +
Sbjct: 471 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRK 530
Query: 369 ---------------FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
F+A+ R L + E+D+A+ +++++ +C P I+ GL
Sbjct: 531 AKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLR 590
Query: 414 AKGRMQDVEDLVDRMIRSG 432
A GR ++ L++ + + G
Sbjct: 591 A-GRTEEAGKLINSISKVG 608
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 115/214 (53%), Gaps = 6/214 (2%)
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLN-GFKDNVSTHKSMLKGLCVVGKFDQAVG 317
PNE TYN ++ GLC +A ++ +MR ++ T+ +++ G C G+ D+A
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66
Query: 318 YLRN-VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
LR V M PDV +Y V++G C+ GK D A +++EM+ +G++P F+F+A+
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM-IR--SGH 433
++D A+ L K++ C + VS + +I GLC + R+ + +L M +R
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRER-RIGEAYELFQEMEMREDGAW 185
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D Y+ L+ G+C+ GN+E M++ M +K
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK 219
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 15/213 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L + + A E V +NV PDV TYT +I G C E A + +
Sbjct: 402 TYSSLIDGLCKAGRVNHAME-----VLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEE 456
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V+P++ +N++I C+ G+++EA K + M G P +TY ++ G GR
Sbjct: 457 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 516
Query: 277 VDEAKMLMAKMRLNGFKDNVSTH-------KSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
++ A L MR K + + + ++++GLC + D+A+ + + P
Sbjct: 517 MEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEP 576
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ +++G + G+++EA L+ + GL
Sbjct: 577 AEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 81/144 (56%), Gaps = 3/144 (2%)
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMR-ARGLKPTVFSFNAVFRILVENGELDRAIL 387
P+ ++Y VV+NG CK + +A +LKEMR + + P + +++ V + GE+DRA
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66
Query: 388 LLKQMPQMDCL-PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+L++M D + P+ V+Y +++ GLC G+M ++V M G D +S L+ G
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCR-DGKMDRACEMVREMKLKGVEPDKFTFSALITG 125
Query: 447 YCEEGNVENVMQIAHEMVTKKGRL 470
+C V+ +++ E++T RL
Sbjct: 126 WCNARKVDEALKLYKEILTSSCRL 149
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQA--KQI 152
Y+++ D L ++ A +LKN +K + +I+ + A+ + K++
Sbjct: 403 YSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRV 462
Query: 153 ENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIEN 212
E + ++NS++G L R+ + A + + + P + TYTT++ G+ + G +E
Sbjct: 463 EPS--VGTFNSVIGALCRLGDMDEAWKLLVAMAAHGL-EPGMVTYTTLLEGFSRTGRMEI 519
Query: 213 AKKVFDVMTVKP-------NLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
A ++F+VM K NL+ A++ +I G CK E+++A + E+ +R C P E
Sbjct: 520 AYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEE 579
Query: 263 TYNAMIYGLCINGRVDEAKMLM 284
A++ GL GR +EA L+
Sbjct: 580 DCLAIVDGLLRAGRTEEAGKLI 601
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 171/325 (52%), Gaps = 9/325 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L S+N ++ L +V + A + + K V +V TY T+I GYCKMG I K
Sbjct: 163 LISFNIVINGLCKVGKLNKAGDIIEDM-KVRGVSANVITYNTLIDGYCKMGKIGKMYKAD 221
Query: 218 DVMT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++ + PN + +N +I+GFCK + A K EM +G +PN +TYN++I GL
Sbjct: 222 AILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGL 281
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C NG+V+EA L +M + K N+ TH ++L G C QA ++ + + P+V
Sbjct: 282 CNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNV 341
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y ++I+ +CK ++A +L + M +G+ P V ++N + L G+L+ A L+ +
Sbjct: 342 TTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSE 401
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + ++YN +I LC KG M+ L+D M R G Y+ ++ GYC+EG
Sbjct: 402 MDTKHLKADLITYNILIDSLC-NKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG 460
Query: 452 NVENVMQIAHEMVTKKGRLLKLKNF 476
N+ + + +M K GRL + +
Sbjct: 461 NLRAALNLRSQM-EKVGRLANVATY 484
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 170/317 (53%), Gaps = 8/317 (2%)
Query: 156 ACLYSYNSLLGVLVRVNSIKL---AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIEN 212
A + +YN+L+ ++ I A+ ++ + + P +V T+ +I G+CK +
Sbjct: 196 ANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEV-TFNILIDGFCKDKNVSA 254
Query: 213 AKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
A KVF M VKPN++ YN++ING C G++ EA ++M+N +PN +T+NA++
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLN 314
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G C N V +A L M G NV+T+ ++ C + A R ++ + P
Sbjct: 315 GFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCP 374
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
DV +Y +I G C+ G + A +L+ EM + LK + ++N + L GE+ +A+ LL
Sbjct: 375 DVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLL 434
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+M + P+ ++YNT+I G C +G ++ +L +M + G + Y+ L+KG+C+
Sbjct: 435 DEMCRKGLKPSQLTYNTMIDGYC-KEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493
Query: 450 EGNVENVMQIAHEMVTK 466
+ +E+ + +EM+ K
Sbjct: 494 KDKLEDANGLLNEMLEK 510
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 141/279 (50%), Gaps = 7/279 (2%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMN 250
V++ ++ G K+G I + + V+ M ++P L+++N +ING CK G+L +A +
Sbjct: 128 VTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIE 187
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVD---EAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+M RG N +TYN +I G C G++ +A ++ +MR +G N T ++ G C
Sbjct: 188 DMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFC 247
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
A+ + + P+V +Y +ING C GK +EA +L +M LKP +
Sbjct: 248 KDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNII 307
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+ NA+ +N + +A L MP+ PN +YN +I C + M+D L
Sbjct: 308 THNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDE-NMEDAFALYRI 366
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M+ G D + Y+CL+ G C +G++E + EM TK
Sbjct: 367 MLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTK 405
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 152/297 (51%), Gaps = 5/297 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + NV AA+ F + + + +YNSL+ L + A Q+V +
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMV-NS 300
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+ P++ T+ ++ G+CK M++ A ++FD M + PN+ YN +I+ +CK +E+A
Sbjct: 301 CLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDA 360
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
M+ +G P+ TYN +I GLC G ++ A+ L+++M K ++ T+ ++
Sbjct: 361 FALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDS 420
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ +A+ L + + P +Y +I+G+CK G A++L +M G
Sbjct: 421 LCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLAN 480
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
V ++N + + + +L+ A LL +M + +PN ++Y I+ M KG + D+E
Sbjct: 481 VATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYE-IVTEEMMEKGFVPDIE 536
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 135/248 (54%), Gaps = 4/248 (1%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
+K ++ + N +++G K GE+ + + EM+ R P +++N +I GLC G++++A
Sbjct: 124 LKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAG 183
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD---QAVGYLRNVMEANMNPDVKSYEVVI 338
++ M++ G NV T+ +++ G C +GK +A L+ + + P+ ++ ++I
Sbjct: 184 DIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILI 243
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
+GFCK A+ + EM +G+KP V ++N++ L NG+++ A L QM
Sbjct: 244 DGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLK 303
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
PN +++N ++ G C K ++ +L D M + G + T Y+ L+ YC++ N+E+
Sbjct: 304 PNIITHNALLNGFCKNK-MVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFA 362
Query: 459 IAHEMVTK 466
+ M+ K
Sbjct: 363 LYRIMLGK 370
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G K +V++ ++ GL VG+ + ++ + P + S+ +VING CK+GK ++A
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELD---RAILLLKQMPQMDCLPNFVSYNTI 407
++++M+ RG+ V ++N + + G++ +A +LK+M PN V++N +
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
I G C K + + M R G + Y+ L+ G C G V + +MV
Sbjct: 243 IDGFCKDK-NVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMV 298
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++ + K ++ K GLK +V S N + LV+ GE+ + K+M +
Sbjct: 97 DILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIR 156
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
P +S+N +I GLC G++ D+++ M G + + Y+ L+ GYC+ G +
Sbjct: 157 RRIEPTLISFNIVINGLCKV-GKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKI 214
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 180/378 (47%), Gaps = 43/378 (11%)
Query: 147 HQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
H +++ N CL ++YN+++ +++ ++ A E V + VP V TY ++I G
Sbjct: 276 HYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV-TYCSLING 334
Query: 204 YCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
C G +E A ++F+ +KP+++ YN+++ G C +G + A + MNEM GC P+
Sbjct: 335 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 394
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
TYN +I GLC G + +A ++M + G+ +V T +++ G C K D A+ +
Sbjct: 395 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 454
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ E + PD +Y V+NG CK GK +E +EM +G P ++N + +
Sbjct: 455 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 514
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM--------------------------- 413
+++ A ++ +M Q P+ VS+NT+I G C
Sbjct: 515 KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 574
Query: 414 -------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
K M E + D M+ GH D Y L+ G C+ NV+ EM+ K
Sbjct: 575 TLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI-K 633
Query: 467 KGRLLKLKNFLTRVVDAL 484
KG + + F RV+++L
Sbjct: 634 KGFIPSMSTF-GRVINSL 650
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 178/339 (52%), Gaps = 6/339 (1%)
Query: 128 KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
K++ A RG+V A + Q L++YN + L + A +
Sbjct: 191 KVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAY 250
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEE 244
V PDV TY T+IRG CK M + A M + P+ YNT+I+G+CK ++E
Sbjct: 251 AV--PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQE 308
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + + + + +G P+++TY ++I GLC G V+ A L + + G K ++ + S++K
Sbjct: 309 ATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVK 368
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC+ G A+ + + E +PD+++Y +VING CK+G +A ++ + +G P
Sbjct: 369 GLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLP 428
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
VF+FN + + +LD A+ L+++M + P+ ++YN+++ GLC A G++ +V +
Sbjct: 429 DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA-GKVNEVNET 487
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
MI G + + Y+ L++ +C +E ++ +M
Sbjct: 488 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 526
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 166/337 (49%), Gaps = 4/337 (1%)
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
I+AY G ++ A+ F + +YN+++ LV A + + +++ V
Sbjct: 57 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 116
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
PD+ T+T +R +C A ++ + + +AY T++ G G +A++
Sbjct: 117 -SPDLHTHTIRLRSFCLTARPHIALRLLRALPHR-GAVAYCTVVCGLYAHGHTHDARQLF 174
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++M++ PN +N +++ LC G V EA +L+ K+ G N+ T+ ++GLC
Sbjct: 175 DQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEA 234
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G+ +AV L + M A PDV +Y +I G CK EA+ L+ M +G P F++
Sbjct: 235 GRLPEAV-RLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTY 293
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + + + A LLK +P+ V+Y ++I GLC A+G ++ +L +
Sbjct: 294 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLC-AEGDVERALELFNEAQ 352
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G D +Y+ L+KG C +G + + +Q+ +EM +
Sbjct: 353 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 389
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 147/305 (48%), Gaps = 23/305 (7%)
Query: 158 LYSYNSLL-GVLVRV---NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
++++N+L+ G R+ ++++L E + E + PD TY +++ G CK G +
Sbjct: 430 VFTFNTLIDGYCKRLKLDSALQLVERMW-----EYGIAPDTITYNSVLNGLCKAGKVNEV 484
Query: 214 KKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+ F M +K PN + YN +I FC+ ++EEA K + +M G P+ +++N +IYG
Sbjct: 485 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 544
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C NG ++ A +L K+ G+ T +++ A ++ D
Sbjct: 545 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 604
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+Y V+I+G CK D A L EM +G P++ +F V L N + +A+ ++
Sbjct: 605 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 664
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG---- 446
M ++ +P V +TI L K + + LV+ +++ GH + + Y L +G
Sbjct: 665 IMVKIGVVPEVV--DTI---LNADKKEIAAPKILVEDLMKKGH-ISYPTYEVLHEGVQST 718
Query: 447 -YCEE 450
YC E
Sbjct: 719 IYCLE 723
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 9/273 (3%)
Query: 197 YTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y IR Y + G + +A F D+ P AYN +++ ++A K M+
Sbjct: 53 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G P+ T+ + C+ R A L+ + G + +++ GL G
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTH 168
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A ++ ++ P++ ++ V++ CK G EA LL ++ RG+ +F++N
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
R L E G L A+ L+ M + +P+ V+YNT+I GLC K Q+ + RM+ G
Sbjct: 229 RGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLC-KKSMPQEAMHYLRRMMNQGC 286
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ ++ GYC+ V+ ++ + V K
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFK 319
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 39/246 (15%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI Y R + +A+ + + +YNS+L L + + E F +
Sbjct: 431 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 490
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
++ + P + TY +I +C+ +E A KV M+ + P+ +++NT+I GFC+ G
Sbjct: 491 MILKGCHPNPI-TYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNG 549
Query: 241 ELEE-----------------------------------AKKCMNEMMNRGCRPNELTYN 265
+LE A+K +EM+++G R + TY
Sbjct: 550 DLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYR 609
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+I G C VD A M + +M GF ++ST ++ L V + QAVG + +++
Sbjct: 610 VLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKI 669
Query: 326 NMNPDV 331
+ P+V
Sbjct: 670 GVVPEV 675
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 182/342 (53%), Gaps = 5/342 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IKA G V AI F + + +++Y +L+ L + + I A ++ E
Sbjct: 178 VIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEG 237
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P V T+ +I G CK G + K+ D M +K PN + YNT+ING C KG+L++A
Sbjct: 238 CFPSSV-TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKA 296
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ M+ C PN++TY +I GL GR + L++ + G N + +++ G
Sbjct: 297 VSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISG 356
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L K ++A+G + ++E P++ Y +I+G C+ GK DEA +L EM +G P
Sbjct: 357 LFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPN 416
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
F+++++ + + G +AI + K+M + +C+PN + Y+ +I GLC G++++ +
Sbjct: 417 AFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC-EDGKLREAMMMW 475
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
M+ G D YS ++ G C G+VE +++ +EM+ ++
Sbjct: 476 THMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQE 517
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 153/298 (51%), Gaps = 7/298 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ L + A ++V VP DV TY T+I G K G + +
Sbjct: 279 TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDV-TYGTLINGLVKQGRSVDGVHLLSS 337
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ + N AY+T+I+G K+ + EEA +M+ +GC+PN + Y+A+I GLC G+
Sbjct: 338 LEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGK 397
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEAK ++ +M G N T+ S++KG G +A+ + + + N P+ Y V
Sbjct: 398 LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSV 457
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM--PQ 394
+I+G C+ GK EA+ + M RGL+P V +++++ L G ++ + L +M +
Sbjct: 458 LIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQE 517
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
D P+ V+YN ++ LC + + DL++ M+ G N D + L E+ N
Sbjct: 518 SDSQPDVVTYNILLRALC-KQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN 574
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 200/437 (45%), Gaps = 55/437 (12%)
Query: 68 PYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFIS 127
PY +FF++ S +P Y P I D + +AS + S K D
Sbjct: 23 PYFC-WFFSFRSKTTLSP--YESDAP----IPDQIFK------SASQM-GSYKSGDSTFY 68
Query: 128 KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
LI+ Y + G+ F + K+ ++ + + + + A E F ++V E
Sbjct: 69 SLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDE 128
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV-----MTVKPNLLAYNTMINGFCKKGEL 242
V ++ +++ + G+ A + ++ + PN+L++N +I CK G +
Sbjct: 129 FQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLV 188
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVS---- 297
+ A + EM + C P+ TY ++ GLC R+DEA +L+ +M++ G F +V+
Sbjct: 189 DRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVL 248
Query: 298 ------------------------------THKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
T+ +++ GLC+ GK D+AV L ++ +
Sbjct: 249 INGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKC 308
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P+ +Y +ING K G+S + + LL + RG ++++ + L + + + A+
Sbjct: 309 VPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMG 368
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L K+M + C PN V Y+ +I GLC +G++ + ++++ M+ G + YS L+KG+
Sbjct: 369 LWKKMVEKGCQPNIVVYSALIDGLC-REGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGF 427
Query: 448 CEEGNVENVMQIAHEMV 464
+ GN + +++ EM
Sbjct: 428 FKTGNSQKAIRVWKEMA 444
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 116/225 (51%), Gaps = 6/225 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+Y++L+ L + + A + ++V E P++ Y+ +I G C+ G ++ AK++
Sbjct: 348 YAYSTLISGLFKEEKSEEAMGLWKKMV-EKGCQPNIVVYSALIDGLCREGKLDEAKEILC 406
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K PN Y+++I GF K G ++A + EM C PNE+ Y+ +I+GLC +G
Sbjct: 407 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 466
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM--EANMNPDVKS 333
++ EA M+ M G + +V + SM+ GLC G + + ++ E++ PDV +
Sbjct: 467 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 526
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
Y +++ CK AI LL M RG P + + N L E
Sbjct: 527 YNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALRE 571
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 30/264 (11%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAI-FWFHQA 149
Y+A+ D L + A +L + F S LIK + GN + AI W A
Sbjct: 385 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 444
Query: 150 KQ--IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
K + N C Y+ L+ L ++ A + ++ + PDV Y++MI G C
Sbjct: 445 KNNCVPNEIC---YSVLIHGLCEDGKLREAMMMWTHMLGRGL-RPDVVAYSSMIHGLCNA 500
Query: 208 GMIENAKKVFDVMTVK-----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
G +E K+F+ M + P+++ YN ++ CK+ + A +N M++RGC P+ +
Sbjct: 501 GSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLI 560
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
T N + L + +LN +D ++ L + A + +
Sbjct: 561 TCNIFLNAL--------------REKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVM 606
Query: 323 MEANMNPDVKSYEVVINGFCKIGK 346
++ + P+ ++E +I CK K
Sbjct: 607 LQKFLPPNASTWERIIPELCKPKK 630
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 182/342 (53%), Gaps = 5/342 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IKA G V AI F + + +++Y +L+ L + + I A ++ E
Sbjct: 194 VIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEG 253
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P V T+ +I G CK G + K+ D M +K PN + YNT+ING C KG+L++A
Sbjct: 254 CFPSSV-TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKA 312
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ M+ C PN++TY +I GL GR + L++ + G N + +++ G
Sbjct: 313 VSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISG 372
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L K ++A+G + ++E P++ Y +I+G C+ GK DEA +L EM +G P
Sbjct: 373 LFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPN 432
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
F+++++ + + G +AI + K+M + +C+PN + Y+ +I GLC G++++ +
Sbjct: 433 AFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC-EDGKLREAMMMW 491
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
M+ G D YS ++ G C G+VE +++ +EM+ ++
Sbjct: 492 THMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQE 533
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 153/298 (51%), Gaps = 7/298 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ L + A ++V VP DV TY T+I G K G + +
Sbjct: 295 TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDV-TYGTLINGLVKQGRSVDGVHLLSS 353
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ + N AY+T+I+G K+ + EEA +M+ +GC+PN + Y+A+I GLC G+
Sbjct: 354 LEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGK 413
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEAK ++ +M G N T+ S++KG G +A+ + + + N P+ Y V
Sbjct: 414 LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSV 473
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM--PQ 394
+I+G C+ GK EA+ + M RGL+P V +++++ L G ++ + L +M +
Sbjct: 474 LIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQE 533
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
D P+ V+YN ++ LC + + DL++ M+ G N D + L E+ N
Sbjct: 534 SDSQPDVVTYNILLRALC-KQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN 590
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 189/403 (46%), Gaps = 42/403 (10%)
Query: 102 LLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSY 161
L S + I +AS + S K D LI+ Y + G+ F + K+ ++
Sbjct: 60 LQSETYIFKSASQM-GSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNF 118
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV-- 219
+ + + + A E F ++V E V ++ +++ + G+ A + ++
Sbjct: 119 ILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGV 178
Query: 220 ---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ PN+L++N +I CK G ++ A + EM + C P+ TY ++ GLC R
Sbjct: 179 GGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDR 238
Query: 277 VDEAKMLMAKMRLNG-FKDNVS----------------------------------THKS 301
+DEA +L+ +M++ G F +V+ T+ +
Sbjct: 239 IDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 298
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GLC+ GK D+AV L ++ + P+ +Y +ING K G+S + + LL + RG
Sbjct: 299 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
++++ + L + + + A+ L K+M + C PN V Y+ +I GLC +G++ +
Sbjct: 359 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLC-REGKLDEA 417
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
++++ M+ G + YS L+KG+ + GN + +++ EM
Sbjct: 418 KEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 460
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 116/225 (51%), Gaps = 6/225 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+Y++L+ L + + A + ++V E P++ Y+ +I G C+ G ++ AK++
Sbjct: 364 YAYSTLISGLFKEEKSEEAMGLWKKMV-EKGCQPNIVVYSALIDGLCREGKLDEAKEILC 422
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K PN Y+++I GF K G ++A + EM C PNE+ Y+ +I+GLC +G
Sbjct: 423 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 482
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM--EANMNPDVKS 333
++ EA M+ M G + +V + SM+ GLC G + + ++ E++ PDV +
Sbjct: 483 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 542
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
Y +++ CK AI LL M RG P + + N L E
Sbjct: 543 YNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALRE 587
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 30/264 (11%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAI-FWFHQA 149
Y+A+ D L + A +L + F S LIK + GN + AI W A
Sbjct: 401 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 460
Query: 150 KQ--IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
K + N C Y+ L+ L ++ A + ++ + PDV Y++MI G C
Sbjct: 461 KNNCVPNEIC---YSVLIHGLCEDGKLREAMMMWTHMLGRGL-RPDVVAYSSMIHGLCNA 516
Query: 208 GMIENAKKVFDVMTVK-----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
G +E K+F+ M + P+++ YN ++ CK+ + A +N M++RGC P+ +
Sbjct: 517 GSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLI 576
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
T N + L + +LN +D ++ L + A + +
Sbjct: 577 TCNIFLNAL--------------REKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVM 622
Query: 323 MEANMNPDVKSYEVVINGFCKIGK 346
++ + P+ ++E +I CK K
Sbjct: 623 LQKFLPPNASTWERIIPELCKPKK 646
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 170/322 (52%), Gaps = 9/322 (2%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G A+ F + + + N ++Y SL+ L + + A E ++ ++ +PP V+
Sbjct: 12 GQHGQAVQLFREERCVPNE---FTYGSLIHGLCKAGKLDQAYELLDEM-RDRGIPPGVAV 67
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM- 252
+ +I+G CK G +A F + P+++ +N +++ K G +EEA + M
Sbjct: 68 HNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMH 127
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ C PN +TY +I GLC +G++D A L+ M G NV T+ +++GLC G+
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT 187
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D+ L+ + PDV Y ++NG CK + DEA+ L++ M G PTV ++N++
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ + ++DRA L++ M + C P+ ++YNT+I GLC R+ D + L+ +M+ +
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCR-DARLDDAQALLKQMVAAR 306
Query: 433 HNLDFTMYSCLLKGYCEEGNVE 454
D YS ++ G C++ V+
Sbjct: 307 CVPDVITYSTIIDGLCKDWRVD 328
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 174/340 (51%), Gaps = 10/340 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IK G A+ +F + + ++N L+ LV+ ++ A + F + +
Sbjct: 71 VIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSS 130
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P+V TYTT+I G CK G ++ A ++ D+M PN++ Y+ ++ G CK G ++
Sbjct: 131 QCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKG 190
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ EM RG +P+ + YN ++ GLC + R+DEA L+ M +G V T+ S+++
Sbjct: 191 FTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMEL 250
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C + D+A ++ + E PDV +Y VI G C+ + D+A +LLK+M A P
Sbjct: 251 FCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310
Query: 366 VFSFNAVFRILVENGELD------RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
V +++ + L ++ +D A +L+ M Q C PN +Y +I GLC A+ + Q
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR-KSQ 369
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
L+ RMI S D + +S ++ C+ +++ +I
Sbjct: 370 QALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKI 409
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 168/338 (49%), Gaps = 12/338 (3%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N L +LVR A + F + E VP + TY ++I G CK G ++ A ++ D M
Sbjct: 2 NCALNLLVRAGQHGQAVQLFRE---ERCVPNEF-TYGSLIHGLCKAGKLDQAYELLDEMR 57
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ P + +N +I G CK G +A + C P+ +T+N ++ L +GRV+
Sbjct: 58 DRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117
Query: 279 EAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA + M + NV T+ +++ GLC GK D+A+ L + E P+V +Y V+
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+ G CK G++D+ +LL+EM RG +P V +N + L ++ LD A+ L++ M + C
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P V+YN+++ C +K ++ L+ M G D Y+ ++ G C + +++
Sbjct: 238 YPTVVTYNSLMELFCRSK-QVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQ 296
Query: 458 QIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSW 495
+ +MV R + + ++D L W V W
Sbjct: 297 ALLKQMVA--ARCVPDVITYSTIIDGLCKDWRVD-ADW 331
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 164/317 (51%), Gaps = 13/317 (4%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+LL L + + A E +++ P V TY +++ +C+ ++ A ++ VM
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPT-VVTYNSLMELFCRSKQVDRAFRLIQVM 267
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ + P+++ YNT+I G C+ L++A+ + +M+ C P+ +TY+ +I GLC + RV
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327
Query: 278 DE------AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
D A ++ M+ G N T+ +++GLC K QA+ LR ++++ + PD+
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
S+ +VI CK D A + M R KP ++ A+ L + GE+D+A+ + +
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + P +YN+++ GLC GR+++ +V+ MI D Y L++G C
Sbjct: 448 MVE-SFRPGVATYNSVLDGLC-GVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505
Query: 452 NVENVMQIAHEMVTKKG 468
VE ++ + V KG
Sbjct: 506 CVEEAYEL-FQAVEAKG 521
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 4/206 (1%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKK 239
+++K+ PP+ TY +I G C+ + A + M V P+L +++ +I CK
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+L+ A K M R C+PN + Y A+I GL G VD+A + M + F+ V+T+
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM-VESFRPGVATY 459
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S+L GLC VG+ ++AV + ++ PD SY +I G C++ +EA L + + A
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEA 519
Query: 360 RGLKPTVFSFNAVFRILVENGELDRA 385
+G V +N + L + L A
Sbjct: 520 KGFAMEVGVYNVLVNELCKKKRLSDA 545
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 143/318 (44%), Gaps = 47/318 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ + R + A Q++ E PPDV Y T+I G C+ +++A+ +
Sbjct: 243 TYNSLMELFCRSKQVDRAFRLI-QVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301
Query: 220 MTVK---PNLLAYNTMINGFCKKG------ELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
M P+++ Y+T+I+G CK +LE A + + M GC PN TY +I G
Sbjct: 302 MVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEG 361
Query: 271 LCINGRVDEAKMLMAKM-------RLNGF----------------------------KDN 295
LC + +A L+ +M L+ F K N
Sbjct: 362 LCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPN 421
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
+ +++ GL G+ D+AV ++E+ P V +Y V++G C +G+ +EA+ +++
Sbjct: 422 PVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVE 480
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
M + P S+ A+ R L ++ A L + + YN ++ LC K
Sbjct: 481 GMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKK 540
Query: 416 GRMQDVEDLVDRMIRSGH 433
R+ D + +++I +G+
Sbjct: 541 -RLSDAHGVANKLIEAGY 557
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 7/208 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y ++ L R + A +++ VVP D+S+++ +I CK ++ A K+F +
Sbjct: 354 TYAVVIEGLCRARKSQQALALLRRMIDSEVVP-DLSSFSMVIGSLCKSHDLDAAYKIFGM 412
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ KPN +AY +I+G K GE+++A + E+M RP TYN+++ GLC GR
Sbjct: 413 MSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGR 471
Query: 277 VDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++EA +M+ + F D S + ++++GLC V ++A + V +V Y
Sbjct: 472 IEEAVRMVEGMIHKECFPDGAS-YGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYN 530
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLK 363
V++N CK + +A + ++ G K
Sbjct: 531 VLVNELCKKKRLSDAHGVANKLIEAGYK 558
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L S++ ++G L + + + A + F ++ E P+ Y +I G K G ++ A +VF
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFG-MMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445
Query: 218 DVM--TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
++M + +P + YN++++G C G +EEA + + M+++ C P+ +Y A+I GLC
Sbjct: 446 ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
V+EA L + GF V + ++ LC + A G ++EA
Sbjct: 506 CVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 183/361 (50%), Gaps = 22/361 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ +Y G + A+ F K E L S NSLLG L++ N ++L + F +
Sbjct: 160 LMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHK 219
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--------------------PNLLA 228
V+P DV TYT MI +CK+G +++AK+V M K P+L
Sbjct: 220 VLP-DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYT 278
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y+ +INGFC + EAK + EM++ G +P +TYNA+I G G +++A + +M
Sbjct: 279 YDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV 338
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G + N+ ++L G+C GK ++A+ ++ +ME + PD ++Y ++I G C+
Sbjct: 339 ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMA 398
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
A LL EM+ R L PTV +++ + L G L +L++M PN V Y T++
Sbjct: 399 RAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 458
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+GR+++ +++RM G D Y+ L+ G+C+ +E EM+ ++
Sbjct: 459 TAHA-KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRL 517
Query: 469 R 469
R
Sbjct: 518 R 518
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 176/343 (51%), Gaps = 5/343 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI+ + N+ A + K+ + + +Y+ ++ L R +++ ++V
Sbjct: 385 SLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVM 444
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
N + P+ YTT++ + K G +E ++ + + M + P++ YN++I GFCK +E
Sbjct: 445 -NGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRME 503
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ + EM+ R RPN TY A I G G ++ A +M G NV + +++
Sbjct: 504 EARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 563
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+G C G +A R ++ + DV++Y V+I+G + GK EA + E++ +GL
Sbjct: 564 EGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL 623
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P F++N++ + G +D+A LL++M P+ V+YN +I GLC A G ++ ++
Sbjct: 624 PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA-GEIERAKN 682
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L D + G + Y+ ++ GYC+ N Q+ EM+ +
Sbjct: 683 LFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLR 725
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 164/308 (53%), Gaps = 6/308 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y + + + +++A+ +F++++ V+P +V YT +I G+CK G + A VF
Sbjct: 522 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP-NVGIYTALIEGHCKEGNVTEAFSVFR 580
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ V ++ Y+ +I+G + G++ EA +E+ +G PN TYN++I G C G
Sbjct: 581 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 640
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
VD+A L+ +M + G ++ T+ ++ GLC G+ ++A ++ + P+ +Y
Sbjct: 641 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 700
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++G+CK A LL+EM RG+ P F +N + + + ++A+ L ++M +
Sbjct: 701 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK 760
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ VS+NT+I G C + G++Q+ L++ MI + Y+ L+ C+ G +
Sbjct: 761 G-FASTVSFNTLIEGYCKS-GKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGE 818
Query: 456 VMQIAHEM 463
++ EM
Sbjct: 819 AKRLWLEM 826
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 174/345 (50%), Gaps = 10/345 (2%)
Query: 127 SKLIKAYGDRGNVKAA--IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ LI+ + GNV A +F F ++++ + +Y+ L+ L R + A F ++
Sbjct: 560 TALIEGHCKEGNVTEAFSVFRFILSRRVLQD--VQTYSVLIHGLSRNGKMHEAFGIFSEL 617
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+E + P+ TY ++I G CK G ++ A ++ + M +K P+++ YN +I+G CK GE
Sbjct: 618 -QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 676
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+E AK +++ RG PN +TY AM+ G C + A L+ +M L G + +
Sbjct: 677 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 736
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L C KF++A+ + ++E V S+ +I G+CK GK EA LL+EM +
Sbjct: 737 ILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQ 795
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P ++ ++ + G + A L +M + + +P +Y +++ G G M +V
Sbjct: 796 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY-HNIGNMSEV 854
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L + M+ G D Y ++ YC EGNV ++ E++ K
Sbjct: 855 SALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVK 899
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 178/362 (49%), Gaps = 6/362 (1%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
+I ++ N K + + L+ A+ G V+ + + ++ ++ YNSL+
Sbjct: 437 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 496
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPN 225
+ ++ A + +++ E + P+ TY I GY K G +E A + F+ M V PN
Sbjct: 497 CKAKRMEEARTYLMEML-ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 555
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+ Y +I G CK+G + EA +++R + TY+ +I+GL NG++ EA + +
Sbjct: 556 VGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFS 615
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+++ G N T+ S++ G C G D+A L + +NPD+ +Y ++I+G CK G
Sbjct: 616 ELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 675
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ + A +L ++ RGL P ++ A+ ++ A LL++M P+ YN
Sbjct: 676 EIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN 735
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
I+ C + + + DL M+ G + ++ L++GYC+ G ++ + EM+
Sbjct: 736 VIL-NFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIE 793
Query: 466 KK 467
K+
Sbjct: 794 KQ 795
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 158/313 (50%), Gaps = 5/313 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+Y+ L+ + A+ +++ + P + TY +I G+ + G IE A ++
Sbjct: 276 LYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI-TYNALIDGFMRQGDIEQAFRIK 334
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M ++ NL+ +NT++NG CK G++E+A + M EMM +G P+ TY+ +I G C
Sbjct: 335 DEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRG 394
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+ A L+ +M+ V T+ ++ GLC G LR ++ + P+ Y
Sbjct: 395 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY 454
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++ K G+ +E+ +L+ MR +G+ P VF +N++ + ++ A L +M +
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 514
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN +Y I G A G M+ + + M+ G + +Y+ L++G+C+EGNV
Sbjct: 515 RRLRPNAHTYGAFIDGYSKA-GEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 573
Query: 455 NVMQIAHEMVTKK 467
+ +++++
Sbjct: 574 EAFSVFRFILSRR 586
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 163/347 (46%), Gaps = 12/347 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI G + A F + ++ ++YNSL+ + ++ A + ++
Sbjct: 595 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI 654
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + PD+ TY +I G CK G IE AK +FD + + PN + Y M++G+CK
Sbjct: 655 KGI-NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 713
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + + EM+ RG P+ YN ++ C + ++A L +M GF VS + +++
Sbjct: 714 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFN-TLI 772
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+G C GK +A L ++E P+ +Y +I+ CK G EA L EM+ R +
Sbjct: 773 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 832
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC-----MAKGRM 418
PT ++ ++ G + L ++M P+ ++Y +I C M ++
Sbjct: 833 PTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 892
Query: 419 QDVEDLVDRM-IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+D E LV M ++SG L S + +G+ GN++ ++ MV
Sbjct: 893 KD-EILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMV 938
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 14/232 (6%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFCKKGELEEAKK 247
VPPD Y ++ CK E A +F M K + +++NT+I G+CK G+L+EA
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANH 786
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ EM+ + PN +TY ++I C G + EAK L +M+ T+ S+L G
Sbjct: 787 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 846
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK---- 363
+G + ++ + PD +Y V+I+ +C+ G EA L E+ +G+
Sbjct: 847 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSG 906
Query: 364 -----PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
PT F+I G +D A +L+ M + + N S ++ G
Sbjct: 907 FRLGLPTCSVIARGFQIA---GNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 150 KQIENG-ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
+ +E G A S+N+L+ + ++ A +++++ +P V TYT++I CK G
Sbjct: 756 EMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV-TYTSLIDHNCKAG 814
Query: 209 MIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
M+ AK+++ M V P Y ++++G+ G + E EM+ +G P+++TY
Sbjct: 815 MMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYY 874
Query: 266 AMIYGLCINGRVDEA-----KMLMAKMRL-NGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
MI C G V EA ++L+ M + +GF+ + T + +G + G D+A L
Sbjct: 875 VMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVL 934
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
R++++ + S +++G S+++ +LLK+M
Sbjct: 935 RSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 169/305 (55%), Gaps = 5/305 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N+L+G L R + E Q+ E+ PD+ Y T+I G CK G +E A ++
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +KPN++ YNT++ G C +EA++ ++EM + C +++T+N ++ C N
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G VD L+ +M +G +V T+ +++ G C G D+AV L+++ P+ SY
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+V+ G C G+ +A L+ +M +G P +FN + L + G +++AI LLKQM
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ +SY+T+I GL A G+ ++ +L++ M+ G + + +YS + EG V
Sbjct: 490 NGCSPDLISYSTVIDGLGKA-GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548
Query: 455 NVMQI 459
V+Q+
Sbjct: 549 KVIQM 553
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 147/275 (53%), Gaps = 4/275 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D+ +Y +++G C + +++ D M PN++ +NT+I C+ G E + +
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M GC P+ Y +I G+C G ++ A ++ +M G K NV + ++LKGLC
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
++ +A L + + + D ++ ++++ FC+ G D I LL++M + G P V ++
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
V + G +D A++LLK M C PN VSY ++ GLC A GR D E+L+ +MI
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA-GRWVDAEELMSQMI 453
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ G + ++ L+ C++G VE +++ +M+
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 162/309 (52%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN++L L K AEE ++ +++ P D T+ ++ +C+ G+++ ++ + M
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDC-PLDDVTFNILVDFFCQNGLVDRVIELLEQM 382
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
P+++ Y T+INGFCK+G ++EA + M + GC+PN ++Y ++ GLC GR
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A+ LM++M G N T +++ LC G +QA+ L+ ++ +PD+ SY V
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K GK++EA+ LL M +G+ P ++++ L G +++ I + +
Sbjct: 503 IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTI 562
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ V YN +I LC + D M+ +G + + Y+ L+KG EG +
Sbjct: 563 RSDAVLYNAVISSLC-KRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621
Query: 458 QIAHEMVTK 466
++ E+ ++
Sbjct: 622 ELLSELCSR 630
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 144/279 (51%), Gaps = 4/279 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
VPP+ T+ ++RG C G I +A +V D M+ K P Y+ ++ C+ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + M +GC + N ++ +C G VDEA L+ K+ G + ++ ++ ++LKGL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C+ ++ + ++ + P++ ++ +I C+ G + +L +M G P +
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+ + + + G L+ A +L +MP PN V YNT++ GLC A+ R ++ E+L+
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE-RWKEAEELLS 345
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
M + LD ++ L+ +C+ G V+ V+++ +M++
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 1/273 (0%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
V Y M+ GYC+ G + A+++ + V PN + ++ G C +G + +A + ++EM
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+GC P Y+ ++ C +G + ++ M G + +L +C G D
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+AVG LR + D+ SY V+ G C + + L+ EM P + +FN +
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L NG +R +L QM + C P+ Y TII G+C +G ++ ++++RM G
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGIC-KEGHLEVANEILNRMPSYGL 317
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ Y+ +LKG C + ++ EM K
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 154/320 (48%), Gaps = 14/320 (4%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAY---NTMINGFCKKGELEEAK 246
+PP Y ++ C+ G N+ +V + M K L N ++N C++G ++EA
Sbjct: 145 IPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV 201
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ ++ GC + ++YNA++ GLC+ R + + LM +M N+ T +++ L
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G F++ L + E PD++ Y +I+G CK G + A +L M + GLKP V
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+N V + L A LL +M Q DC + V++N ++ C G + V +L++
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ-NGLVDRVIELLE 380
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLL 486
+M+ G D Y+ ++ G+C+EG ++ + + M + + V ++L
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK-------PNTVSYTIVL 433
Query: 487 MWIVTGGSWISRFVFVHQVV 506
+ + G W+ + Q++
Sbjct: 434 KGLCSAGRWVDAEELMSQMI 453
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
+IR C G A + ++AYN M+ G+C+ G+L A++ +
Sbjct: 52 ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAV---PVP 108
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
PN T+ ++ GLC GR+ +A ++ +M G + +L+ C G F +V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
L + D + +V+N C+ G DEA+ LL+++ G + + S+NAV + L
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
L+ +M ++DC PN V++NT+I LC G + V +++ +M G D
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC-RNGLFERVHEVLAQMSEHGCTPDIR 287
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEM 463
MY+ ++ G C+EG++E +I + M
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRM 312
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 4/238 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I + G + A+ SY +L L AEE Q+++
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELE 243
+ PP+ T+ T+I CK G++E A ++ M V P+L++Y+T+I+G K G+ E
Sbjct: 455 QGC-PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +N M+N+G PN + Y+++ L GRV++ + ++ + + + +++
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
LC + D+A+ + ++ P+ +Y ++I G G + EA LL E+ +RG
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 169/305 (55%), Gaps = 5/305 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N+L+G L R + E Q+ E+ PD+ Y T+I G CK G +E A ++
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +KPN++ YNT++ G C +EA++ ++EM + C +++T+N ++ C N
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G VD L+ +M +G +V T+ +++ G C G D+AV L+++ P+ SY
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+V+ G C G+ +A L+ +M +G P +FN + L + G +++AI LLKQM
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ +SY+T+I GL A G+ ++ +L++ M+ G + + +YS + EG V
Sbjct: 490 NGCSPDLISYSTVIDGLGKA-GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548
Query: 455 NVMQI 459
V+Q+
Sbjct: 549 KVIQM 553
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 147/275 (53%), Gaps = 4/275 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D+ +Y +++G C + +++ D M PN++ +NT+I C+ G E + +
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M GC P+ Y +I G+C G ++ A ++ +M G K NV + ++LKGLC
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
++ +A L + + + D ++ ++++ FC+ G D I LL++M + G P V ++
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
V + G +D A++LLK M C PN VSY ++ GLC A GR D E+L+ +MI
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA-GRWVDAEELMSQMI 453
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ G + ++ L+ C++G VE +++ +M+
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 162/309 (52%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN++L L K AEE ++ +++ P D T+ ++ +C+ G+++ ++ + M
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDC-PLDDVTFNILVDFFCQNGLVDRVIELLEQM 382
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
P+++ Y T+INGFCK+G ++EA + M + GC+PN ++Y ++ GLC GR
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A+ LM++M G N T +++ LC G +QA+ L+ ++ +PD+ SY V
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K GK++EA+ LL M +G+ P ++++ L G +++ I + +
Sbjct: 503 IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTI 562
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ V YN +I LC + D M+ +G + + Y+ L+KG EG +
Sbjct: 563 RSDAVLYNAVISSLC-KRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621
Query: 458 QIAHEMVTK 466
++ E+ ++
Sbjct: 622 ELLSELCSR 630
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 144/279 (51%), Gaps = 4/279 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
VPP+ T+ ++RG C G I +A +V D M+ K P Y+ ++ C+ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + M +GC + N ++ +C G VDEA L+ K+ G + ++ ++ ++LKGL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C+ ++ + ++ + P++ ++ +I C+ G + +L +M G P +
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+ + + + G L+ A +L +MP PN V YNT++ GLC A+ R ++ E+L+
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE-RWKEAEELLS 345
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
M + LD ++ L+ +C+ G V+ V+++ +M++
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 1/273 (0%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
V Y M+ GYC+ G + A+++ + V PN + ++ G C +G + +A + ++EM
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+GC P Y+ ++ C +G + ++ M G + +L +C G D
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+AVG LR + D+ SY V+ G C + + L+ EM P + +FN +
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L NG +R +L QM + C P+ Y TII G+C +G ++ ++++RM G
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGIC-KEGHLEVANEILNRMPSYGL 317
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ Y+ +LKG C + ++ EM K
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 154/320 (48%), Gaps = 14/320 (4%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAY---NTMINGFCKKGELEEAK 246
+PP Y ++ C+ G N+ +V + M K L N ++N C++G ++EA
Sbjct: 145 IPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV 201
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ ++ GC + ++YNA++ GLC+ R + + LM +M N+ T +++ L
Sbjct: 202 GLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G F++ L + E PD++ Y +I+G CK G + A +L M + GLKP V
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+N V + L A LL +M Q DC + V++N ++ C G + V +L++
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ-NGLVDRVIELLE 380
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLL 486
+M+ G D Y+ ++ G+C+EG ++ + + M + + V ++L
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK-------PNTVSYTIVL 433
Query: 487 MWIVTGGSWISRFVFVHQVV 506
+ + G W+ + Q++
Sbjct: 434 KGLCSAGRWVDAEELMSQMI 453
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
+IR C G A + ++AYN M+ G+C+ G+L A++ +
Sbjct: 52 ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAV---PVP 108
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
PN T+ ++ GLC GR+ +A ++ +M G + +L+ C G F +V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
L + D + +V+N C+ G DEA+ LL+++ G + + S+NAV + L
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
L+ +M ++DC PN V++NT+I LC G + V +++ +M G D
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC-RNGLFERVHEVLAQMSEHGCTPDIR 287
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEM 463
MY+ ++ G C+EG++E +I + M
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRM 312
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 4/238 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I + G + A+ SY +L L AEE Q+++
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELE 243
+ PP+ T+ T+I CK G++E A ++ M V P+L++Y+T+I+G K G+ E
Sbjct: 455 QGC-PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +N M+N+G PN + Y+++ L GRV++ + ++ + + + +++
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
LC + D+A+ + ++ P+ +Y ++I G G + EA LL E+ +RG
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 177/340 (52%), Gaps = 4/340 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+K Y +GN+ +A+ F++ + +Y+ L+ +I+ A E + Q+ K
Sbjct: 329 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM-K 387
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD--VMTVKPNLLAYNTMINGFCKKGELEE 244
N +PP V +++RGY K + E A K+FD V N+ YN M++ CK G+++E
Sbjct: 388 LNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDE 447
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A ++ M+N+G PN ++YN MI G C G +D A + + M K NV T+ ++
Sbjct: 448 ACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILID 507
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G G ++A+ ++ N+ P ++ +ING CK+G+ EA LK G P
Sbjct: 508 GNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP 567
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ ++N++ ++ G +D A+ + ++M + PN V+Y ++I G C + R+
Sbjct: 568 SCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN-RIDLALKT 626
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D M G LD T YS L+ G+C+ ++E+ + E++
Sbjct: 627 RDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELL 666
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 178/373 (47%), Gaps = 44/373 (11%)
Query: 136 RGNVKAAIFWFHQAKQIENG-----ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVV 190
RG +KA + W +K + A +++YN ++ L + + A +V + +V
Sbjct: 403 RGYLKAPL-WEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV 461
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKK 247
P +V +Y MI G+C+ G ++ A VF M +KPN++ Y+ +I+G KKG+ E+A
Sbjct: 462 P-NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 520
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
++M++ P + T+N +I GLC G++ EA+ + GF + T+ S++ G
Sbjct: 521 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFI 580
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G D A+ R + E ++P+V +Y +INGFCK + D A+ EMR +GL+ V
Sbjct: 581 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVT 640
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL---------------- 411
+++A+ + +++ A L ++ ++ PN + YN++I G
Sbjct: 641 AYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 700
Query: 412 ------------------CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ +GR+ DL M+ G D + L+ G C +G +
Sbjct: 701 INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQL 760
Query: 454 ENVMQIAHEMVTK 466
EN +I EM K
Sbjct: 761 ENARKILEEMDRK 773
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 160/345 (46%), Gaps = 40/345 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN ++ R ++ +A F ++ ++ P+V TY+ +I G K G E A +FD
Sbjct: 466 SYNDMILGHCRKGNMDMASSVFSDMLARDL-KPNVVTYSILIDGNFKKGDSEKALDLFDQ 524
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P +NT+ING CK G++ EA+ + + G P+ +TYN+++ G G
Sbjct: 525 MLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGN 584
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A + +M G NV T+ S++ G C + D A+ + E + DV +Y
Sbjct: 585 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSA 644
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF----------------------R 374
+I+GFCK + A L E+ GL P +N++ R
Sbjct: 645 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 704
Query: 375 I-------------LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
I L++ G L A L +M +P+ ++++ ++ GLC KG++++
Sbjct: 705 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLC-NKGQLENA 763
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+++ M R +Y+ L+ GY EGN++ + EM+ +
Sbjct: 764 RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDR 808
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 176/364 (48%), Gaps = 12/364 (3%)
Query: 93 PCYTAITDVLLSHS-------LISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFW 145
P + D++L H S+ + +L K + S LI +G+ + A+
Sbjct: 462 PNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDL 521
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
F Q + +++N+++ L +V + A + ++E +P TY +++ G+
Sbjct: 522 FDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP-SCMTYNSIVDGFI 580
Query: 206 KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
K G I++A V+ M V PN++ Y ++INGFCK ++ A K +EM +G +
Sbjct: 581 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVT 640
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
Y+A+I G C ++ A+ L ++ G N + SM+ G + + A+ + + +
Sbjct: 641 AYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 700
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ + D+ +Y +I+G K G+ A L EM ++G+ P + +F+ + L G+L
Sbjct: 701 INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQL 760
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
+ A +L++M + + P+ + YNT+I G +G +++ L D M+ G D Y
Sbjct: 761 ENARKILEEMDRKNMTPSVLIYNTLIAGY-FREGNLKEAFTLHDEMLDRGLVPDDVTYDI 819
Query: 443 LLKG 446
L+ G
Sbjct: 820 LING 823
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 150/309 (48%), Gaps = 8/309 (2%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N LL LVR N I + ++++V + D T M+R K G +E A++ F
Sbjct: 189 NILLTALVRRNMIGELRDLYNKMVLRGIYG-DHFTVHVMVRACLKEGRVEEAEEYFRETK 247
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
VK + AY+ +I CKK + + EM RG P+E T+ ++I G +
Sbjct: 248 ERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMV 307
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EA L +M G N+ S++KG C G D A+ + E + P+ +Y V+I
Sbjct: 308 EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 367
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC- 397
G C G ++A L +M+ G+ P+VF+ N++ R ++ + A L + +DC
Sbjct: 368 EGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE--AVDCG 425
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ N +YN ++ LC G+M + L+D M+ G + Y+ ++ G+C +GN++
Sbjct: 426 VANIFTYNIMMSWLCKG-GKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMAS 484
Query: 458 QIAHEMVTK 466
+ +M+ +
Sbjct: 485 SVFSDMLAR 493
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 112/236 (47%), Gaps = 3/236 (1%)
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
+N ++N + + +E A C N M+ + P N ++ L + E + L KM
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 212
Query: 289 LNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
L G + D+ + H M++ G+ ++A Y R E + D +Y ++I CK S
Sbjct: 213 LRGIYGDHFTVH-VMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 271
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
+ + LL+EM+ RG P+ +F +V V G + A+ L ++M N V ++
Sbjct: 272 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 331
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G C A+G + +L +++ G + YS L++G C GN+E ++ +M
Sbjct: 332 MKGYC-AQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 386
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 156/350 (44%), Gaps = 57/350 (16%)
Query: 47 DQFSLCLGSNIVTKVI-----YEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDV 101
D + L N+VT I +++ + AL F+ + N P + + I +
Sbjct: 489 DMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDF-----TFNTIING 543
Query: 102 LLSHSLISIAASLLKNSNKLSDFFI------SKLIKAYGDRGNVKAAIFWFHQAKQIENG 155
L +S A LKN L + FI + ++ + GN+ +A+ + + +
Sbjct: 544 LCKVGQMSEARDKLKNF--LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVS 601
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
+ +Y SL+ + N I LA + ++ +E + DV+ Y+ +I G+CK +E+A+
Sbjct: 602 PNVVTYTSLINGFCKSNRIDLALKTRDEM-REKGLELDVTAYSALIDGFCKRRDMESAQD 660
Query: 216 VF-DVMTV--KPNLLAYNTMINGF-----------------------------------C 237
+F +++ V PN + YN+MI+GF
Sbjct: 661 LFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 720
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K+G L A EM+++G P+ +T++ ++ GLC G+++ A+ ++ +M +V
Sbjct: 721 KEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVL 780
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+ +++ G G +A +++ + PD +Y+++ING K +S
Sbjct: 781 IYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 830
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 180/378 (47%), Gaps = 43/378 (11%)
Query: 147 HQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
H +++ N CL ++YN+++ +++ ++ A E V + VP V TY ++I G
Sbjct: 277 HYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV-TYCSLING 335
Query: 204 YCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
C G +E A ++F+ +KP+++ YN+++ G C +G + A + MNEM GC P+
Sbjct: 336 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 395
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
TYN +I GLC G + +A ++M + G+ +V T +++ G C K D A+ +
Sbjct: 396 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 455
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ E + PD +Y V+NG CK GK +E +EM +G P ++N + +
Sbjct: 456 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 515
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM--------------------------- 413
+++ A ++ +M Q P+ VS+NT+I G C
Sbjct: 516 KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 575
Query: 414 -------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
K M E + D M+ GH D Y L+ G C+ NV+ EM+ K
Sbjct: 576 TLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI-K 634
Query: 467 KGRLLKLKNFLTRVVDAL 484
KG + + F RV+++L
Sbjct: 635 KGFIPSMSTF-GRVINSL 651
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 178/339 (52%), Gaps = 6/339 (1%)
Query: 128 KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
K++ A RG+V A + Q L++YN + L + A +
Sbjct: 192 KVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAY 251
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEE 244
V PDV TY T+IRG CK M + A M + P+ YNT+I+G+CK ++E
Sbjct: 252 AV--PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQE 309
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + + + + +G P+++TY ++I GLC G V+ A L + + G K ++ + S++K
Sbjct: 310 ATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVK 369
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC+ G A+ + + E +PD+++Y +VING CK+G +A ++ + +G P
Sbjct: 370 GLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLP 429
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
VF+FN + + +LD A+ L+++M + P+ ++YN+++ GLC A G++ +V +
Sbjct: 430 DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA-GKVNEVNET 488
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
MI G + + Y+ L++ +C +E ++ +M
Sbjct: 489 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 527
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 166/337 (49%), Gaps = 4/337 (1%)
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
I+AY G ++ A+ F + +YN+++ LV A + + +++ V
Sbjct: 58 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 117
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
PD+ T+T +R +C A ++ + + +AY T++ G G +A++
Sbjct: 118 -SPDLHTHTIRLRSFCLTARPHIALRLLRALPHR-GAVAYCTVVCGLYAHGHTHDARQLF 175
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++M++ PN +N +++ LC G V EA +L+ K+ G N+ T+ ++GLC
Sbjct: 176 DQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEA 235
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G+ +AV L + M A PDV +Y +I G CK EA+ L+ M +G P F++
Sbjct: 236 GRLPEAV-RLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTY 294
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + + + A LLK +P+ V+Y ++I GLC A+G ++ +L +
Sbjct: 295 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLC-AEGDVERALELFNEAQ 353
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G D +Y+ L+KG C +G + + +Q+ +EM +
Sbjct: 354 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 390
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 147/305 (48%), Gaps = 23/305 (7%)
Query: 158 LYSYNSLL-GVLVRV---NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
++++N+L+ G R+ ++++L E + E + PD TY +++ G CK G +
Sbjct: 431 VFTFNTLIDGYCKRLKLDSALQLVERMW-----EYGIAPDTITYNSVLNGLCKAGKVNEV 485
Query: 214 KKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+ F M +K PN + YN +I FC+ ++EEA K + +M G P+ +++N +IYG
Sbjct: 486 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 545
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C NG ++ A +L K+ G+ T +++ A ++ D
Sbjct: 546 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 605
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+Y V+I+G CK D A L EM +G P++ +F V L N + +A+ ++
Sbjct: 606 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 665
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG---- 446
M ++ +P V +TI L K + + LV+ +++ GH + + Y L +G
Sbjct: 666 IMVKIGVVPEVV--DTI---LNADKKEIAAPKILVEDLMKKGH-ISYPTYEVLHEGVQST 719
Query: 447 -YCEE 450
YC E
Sbjct: 720 IYCLE 724
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 9/273 (3%)
Query: 197 YTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y IR Y + G + +A F D+ P AYN +++ ++A K M+
Sbjct: 54 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G P+ T+ + C+ R A L+ + G + +++ GL G
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTH 169
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A ++ ++ P++ ++ V++ CK G EA LL ++ RG+ +F++N
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
R L E G L A+ L+ M + +P+ V+YNT+I GLC K Q+ + RM+ G
Sbjct: 230 RGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLC-KKSMPQEAMHYLRRMMNQGC 287
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ ++ GYC+ V+ ++ + V K
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFK 320
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 39/246 (15%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI Y R + +A+ + + +YNS+L L + + E F +
Sbjct: 432 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 491
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
++ + P + TY +I +C+ +E A KV M+ + P+ +++NT+I GFC+ G
Sbjct: 492 MILKGCHPNPI-TYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNG 550
Query: 241 ELEE-----------------------------------AKKCMNEMMNRGCRPNELTYN 265
+LE A+K +EM+++G R + TY
Sbjct: 551 DLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYR 610
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+I G C VD A M + +M GF ++ST ++ L V + QAVG + +++
Sbjct: 611 VLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKI 670
Query: 326 NMNPDV 331
+ P+V
Sbjct: 671 GVVPEV 676
>gi|3258568|gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
Length = 691
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 208/439 (47%), Gaps = 48/439 (10%)
Query: 68 PYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----KNSN---K 120
P L FF+W SN + H + + + L +++A + L + SN K
Sbjct: 81 PADGLRFFDWVSNKG-----FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVK 135
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
L D + + LI++YG+ G + ++ F KQ+ + ++NSLL +L++ +A +
Sbjct: 136 LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDL 195
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT------------------- 221
F ++ + V PD T+ T+I G+CK M++ A ++F M
Sbjct: 196 FDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELAGKVKIAHNVLSGMLKKA 255
Query: 222 --VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
V PN+++Y T++ G+C K E++EA ++M++RG +PN +TYN +I GL R DE
Sbjct: 256 TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDE 315
Query: 280 AK--MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
K ++ F + T ++K C G D A+ + ++ ++PD SY V+
Sbjct: 316 IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVL 375
Query: 338 INGFCKIGKSDEAISLLKEMRARGL-------KPTVFSFNAVFRILVENGELDRAILLLK 390
I C + D A +L E+ + + KP ++N +F L NG+ +A + +
Sbjct: 376 IRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFR 435
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
Q+ + + + SY T+I G C +G+ + +L+ M+R D Y L+ G +
Sbjct: 436 QLMKRG-VQDPPSYKTLITGHC-REGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKI 493
Query: 451 GNVENVMQIAHEMVTKKGR 469
G +AH+ + + R
Sbjct: 494 GEA----LLAHDTLQRMLR 508
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 126/263 (47%), Gaps = 22/263 (8%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQ--AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ L++ Y + + A+ FH ++ ++ A +YN+L+ L + +E +
Sbjct: 266 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAV--TYNTLIKGLSEAHRY---DEIKDIL 320
Query: 185 VKEN----VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFC 237
+ N PD T+ +I+ +C G ++ A KVF M + P+ +Y+ +I C
Sbjct: 321 IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC 380
Query: 238 KKGELEEAKKCMNEMMNRG-------CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+ E + A+ NE+ + C+P YN M LC NG+ +A+ + ++
Sbjct: 381 MRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKR 440
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G +D S +K+++ G C GKF A L ++ PD+++YE++I+G KIG++ A
Sbjct: 441 GVQDPPS-YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLA 499
Query: 351 ISLLKEMRARGLKPTVFSFNAVF 373
L+ M P +F++V
Sbjct: 500 HDTLQRMLRSSYLPVATTFHSVL 522
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 37/237 (15%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN + L K AE+ F Q++K V P +Y T+I G+C+ G + A ++ +
Sbjct: 413 AYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP--PSYKTLITGHCREGKFKPAYELLVL 470
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+L Y +I+G K GE A + M+ P T+++++ L
Sbjct: 471 MLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKF 530
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSML----------KGLCVVG---------KFDQAVG 317
+E+ L+ M + N+ ++ K +V K ++ +G
Sbjct: 531 ANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLG 590
Query: 318 YL---RNVMEAN----------MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
YL R +++A+ D+ + VI G CK + EA SL E+ G
Sbjct: 591 YLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 647
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 175/313 (55%), Gaps = 5/313 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YNS++ + + A F ++V +V+P V T+T ++ G CK GM+ A+ VF
Sbjct: 268 VFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTV-TFTILVDGLCKEGMVSEARLVF 326
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ MT V+P++ YN +++G+C + + EAKK M+ +GC P +YN +I G C +
Sbjct: 327 ETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKS 386
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+DEAK L+A+M + T+ ++++GLC +G+ +A+ + + +P++ +Y
Sbjct: 387 RRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTY 446
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++GFCK G DEA+ LLK M+ + L+P + + + + G+L+ A L ++
Sbjct: 447 VILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFG 506
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ +Y +I GL + +G + DL +M G + Y+ +++G+ + +
Sbjct: 507 DGTRPDIRTYTVMIKGL-LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSS 565
Query: 455 NVMQIAHEMVTKK 467
+++ EMV K+
Sbjct: 566 TAIRLIDEMVGKR 578
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 182/373 (48%), Gaps = 40/373 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G +K A+ F++ + + + SY +++ L + + +A + F ++ ++N
Sbjct: 169 LINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKM-EQN 227
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P+V TY+T+I CK ++ +A + M + PN+ YN++++GFC G+L EA
Sbjct: 228 GCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEA 287
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ EM+ R PN +T+ ++ GLC G V EA+++ M G + ++ST+ +++ G
Sbjct: 288 TRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDG 347
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C+ ++A ++ P SY ++ING+CK + DEA SLL EM + L P
Sbjct: 348 YCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPD 407
Query: 366 VFSFNAVFRILVE-----------------------------------NGELDRAILLLK 390
+++ + + L + +G LD A+ LLK
Sbjct: 408 TVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLK 467
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
M + PN V Y +I G+ +A G+++ ++L ++ G D Y+ ++KG +E
Sbjct: 468 SMKEKKLEPNIVHYTILIEGMFIA-GKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKE 526
Query: 451 GNVENVMQIAHEM 463
G + + +M
Sbjct: 527 GLSDEAYDLFRKM 539
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 164/311 (52%), Gaps = 5/311 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+YS N L+ L R+N + + ++ K + PD T+ +I G C G I+ A ++F
Sbjct: 128 VYSLNILINCLCRLNHVDFSVSVLGKMFKLG-IHPDAITFNALINGLCNEGKIKEAVELF 186
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + PN+++Y T+ING CK G A +M GC+PN +TY+ +I LC +
Sbjct: 187 NEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKD 246
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
V++A +++M G NV T+ S++ G C +G+ ++A + ++ ++ P+ ++
Sbjct: 247 RLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF 306
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++G CK G EA + + M +G++P + ++NA+ ++ A + + M +
Sbjct: 307 TILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR 366
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P SYN +I G C ++ RM + + L+ M N D YS L++G C+ G +
Sbjct: 367 KGCAPGAHSYNILINGYCKSR-RMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPK 425
Query: 455 NVMQIAHEMVT 465
+ + EM +
Sbjct: 426 EALNLFKEMCS 436
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 146/280 (52%), Gaps = 4/280 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAK 246
V +V + +I C++ ++ + V M + P+ + +N +ING C +G+++EA
Sbjct: 124 VTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAV 183
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ NEM+ RG PN ++Y +I GLC G A + KM NG K NV T+ +++ L
Sbjct: 184 ELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSL 243
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C + A+ +L ++E + P+V +Y +++GFC +G+ +EA L KEM R + P
Sbjct: 244 CKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNT 303
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+F + L + G + A L+ + M + P+ +YN ++ G C+ + M + + + +
Sbjct: 304 VTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQR-LMNEAKKVFE 362
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MIR G Y+ L+ GYC+ ++ + EM K
Sbjct: 363 IMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHK 402
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 133/251 (52%), Gaps = 2/251 (0%)
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
D+ V N+ + N +IN C+ ++ + + +M G P+ +T+NA+I GLC G++
Sbjct: 120 DLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKI 179
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L +M G + NV ++ +++ GLC G AV + + + P+V +Y +
Sbjct: 180 KEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTI 239
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ CK ++A+ L EM RG+ P VF++N++ G+L+ A L K+M D
Sbjct: 240 IDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDV 299
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+PN V++ ++ GLC +G + + + + M G D + Y+ L+ GYC + + N
Sbjct: 300 MPNTVTFTILVDGLC-KEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQ-RLMNEA 357
Query: 458 QIAHEMVTKKG 468
+ E++ +KG
Sbjct: 358 KKVFEIMIRKG 368
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 122/232 (52%), Gaps = 10/232 (4%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+SYN L+ + + A+ ++ + + PD TY+T+++G C++G + A +F
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHK-ALNPDTVTYSTLMQGLCQLGRPKEALNLFK 432
Query: 219 VMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M PNL+ Y +++GFCK G L+EA K + M + PN + Y +I G+ I G
Sbjct: 433 EMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAG 492
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+++ AK L +K+ +G + ++ T+ M+KGL G D+A R + + P+ SY
Sbjct: 493 KLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYN 552
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN-AVFRILVENGELDRAI 386
V+I GF + S AI L+ EM + FS N + F++L++ D I
Sbjct: 553 VMIQGFLQNQDSSTAIRLIDEMVGKR-----FSVNLSTFQMLLDLESQDEII 599
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 119/246 (48%), Gaps = 2/246 (0%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P+++ + + F KK + N+M N + N +I LC VD +
Sbjct: 90 RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
++ KM G + T +++ GLC GK +AV +++ P+V SY VING C
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K G + A+ + K+M G KP V +++ + L ++ ++ A+ L +M + PN
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVF 269
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YN+I+ G C G++ + L M+ + ++ L+ G C+EG V ++ E
Sbjct: 270 TYNSIVHGFCNL-GQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEA-RLVFE 327
Query: 463 MVTKKG 468
+T+KG
Sbjct: 328 TMTEKG 333
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 10/251 (3%)
Query: 221 TVKPNLLAYNTMINGFCKKGE----LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
T KP+L N +GF +++A M+ RP+ + + + +
Sbjct: 52 TKKPSLPKNN---DGFVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQ 108
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
L +M L NV + ++ LC + D +V L + + ++PD ++
Sbjct: 109 YSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNA 168
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING C GK EA+ L EM RG +P V S+ V L + G A+ + K+M Q
Sbjct: 169 LINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNG 228
Query: 397 CLPNFVSYNTIICGLCMAKGRM-QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C PN V+Y+TII LC K R+ D + + M+ G + Y+ ++ G+C G +
Sbjct: 229 CKPNVVTYSTIIDSLC--KDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNE 286
Query: 456 VMQIAHEMVTK 466
++ EMV +
Sbjct: 287 ATRLFKEMVGR 297
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 167/310 (53%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+S+L + A F Q+V+ NV+P D T+ ++ G K GMI A+ VF+
Sbjct: 154 TYSSILHGFCNLGRSNEATSLFKQMVERNVMP-DTVTFNILVDGLSKEGMILEAQCVFET 212
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V+PN+ YN +++G+C + +++EA+K N M+ +GC P+ +YN +I G C +GR
Sbjct: 213 MIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGR 272
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEAK L+A+M + T+ +++KG C G+ A L + + PD+ +Y +
Sbjct: 273 IDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSI 332
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
V++G CK G DEA LLK M+ ++P +F + + + + G+L+ A L +
Sbjct: 333 VLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKG 392
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+Y +I GL + G + +L M G + Y+ +++G+ G+ N
Sbjct: 393 IQPDVVTYTVMISGL-LKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNA 451
Query: 457 MQIAHEMVTK 466
++ EMV +
Sbjct: 452 GRLIEEMVGR 461
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 166/311 (53%), Gaps = 5/311 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++LL L I A + F ++VK PDV TY+T+I G CKMG A ++
Sbjct: 49 TFSTLLNGLSSKAKIIDAVKLFDEMVKMGY-EPDVITYSTIINGLCKMGSTTMAIQLLKK 107
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M KPN++ Y+T+I+ CK + EA + ++EM+NRG PN +TY+++++G C GR
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+EA L +M + T ++ GL G +A ++E + P+V +Y
Sbjct: 168 SNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNA 227
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G+C + DEA L M +G P+V S+N + + ++G +D A LL +M
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+Y+T++ G C GR QD + L++ M G D YS +L G C++G+++
Sbjct: 288 LTPDTVTYSTLMKGFC-QDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEA 346
Query: 457 MQIAHEMVTKK 467
++ M K
Sbjct: 347 FELLKAMQESK 357
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 152/277 (54%), Gaps = 4/277 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+ P+ T++T++ G I +A K+FD M +P+++ Y+T+ING CK G A
Sbjct: 43 LQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAI 102
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + +M +GC+PN + Y+ +I LC + + EA +++M G NV T+ S+L G
Sbjct: 103 QLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGF 162
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C +G+ ++A + ++E N+ PD ++ ++++G K G EA + + M +G++P V
Sbjct: 163 CNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNV 222
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++NA+ ++D A L M + C P+ SYN +I G C + GR+ + + L+
Sbjct: 223 NTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKS-GRIDEAKGLLA 281
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M D YS L+KG+C++G ++ ++ EM
Sbjct: 282 EMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM 318
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 182/369 (49%), Gaps = 9/369 (2%)
Query: 105 HSLISIAASLLKNSNKLS----DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS 160
H A S+L N KL S L+ + + A+ F + ++ + +
Sbjct: 25 HDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVIT 84
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++++ L ++ S +A + ++ +E P+V Y+T+I CK +I A + M
Sbjct: 85 YSTIINGLCKMGSTTMAIQLLKKM-EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEM 143
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN++ Y+++++GFC G EA +M+ R P+ +T+N ++ GL G +
Sbjct: 144 VNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMI 203
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA+ + M G + NV+T+ +++ G C + D+A ++ P V+SY ++
Sbjct: 204 LEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNIL 263
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I G CK G+ DEA LL EM + L P +++ + + ++G A LL++M
Sbjct: 264 IKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGL 323
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
LP+ ++Y+ ++ GLC +G + + +L+ M S + +Y+ L++G C G +E
Sbjct: 324 LPDLMTYSIVLDGLC-KQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAAR 382
Query: 458 QIAHEMVTK 466
++ + K
Sbjct: 383 ELFSNLFVK 391
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 135/286 (47%), Gaps = 38/286 (13%)
Query: 218 DVMTVKPNLLAYNTMINGFC-------------------------------------KKG 240
D+ ++P++ +IN FC K
Sbjct: 2 DLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKA 61
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++ +A K +EM+ G P+ +TY+ +I GLC G A L+ KM G K NV +
Sbjct: 62 KIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYS 121
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ LC +A+ +L ++ ++P+V +Y +++GFC +G+S+EA SL K+M R
Sbjct: 122 TIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVER 181
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+ P +FN + L + G + A + + M + PN +YN ++ G C ++ +M +
Sbjct: 182 NVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYC-SQSQMDE 240
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ L + M+R G Y+ L+KG+C+ G ++ + EM K
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHK 286
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 113/213 (53%), Gaps = 4/213 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN L+ + I A+ ++ + PD TY+T+++G+C+ G ++A+K+ +
Sbjct: 259 SYNILIKGHCKSGRIDEAKGLLAEM-SHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEE 317
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+L+ Y+ +++G CK+G L+EA + + M PN Y +I G+C G+
Sbjct: 318 MRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGK 377
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ A+ L + + + G + +V T+ M+ GL G ++A R++ P+ +Y V
Sbjct: 378 LEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNV 437
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+I GF + G + A L++EM RG +F
Sbjct: 438 IIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTF 470
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 111/238 (46%), Gaps = 8/238 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIK + G + A + +Y++L+ + + A++ ++
Sbjct: 263 LIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYG 322
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
++P D+ TY+ ++ G CK G ++ A ++ M ++PN+ Y +I G C G+LE A
Sbjct: 323 LLP-DLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAA 381
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ + + +G +P+ +TY MI GL G +EA L M ++G N T+ +++G
Sbjct: 382 RELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQG 441
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G A + ++ + D +++++ + + DE ISL ++G K
Sbjct: 442 FLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSD----LESRDEIISLFMHGSSQGRK 495
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 182/334 (54%), Gaps = 10/334 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++N + L ++ + A + ++++++ +V PD T+ +I G CK G E A +F+
Sbjct: 533 YAFNCCINGLSKLGDVSRALQVYNRMLELELV-PDKVTFNILIAGACKAGNFEQASALFE 591
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P+++ + +I+G CK G++E A+ ++ M N G PN +TYNA+++GLC +G
Sbjct: 592 EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 651
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R++EA + +M +G + T+ S++ LC + D A+ + + +PD +Y
Sbjct: 652 RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYN 711
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP-- 393
++++G K G++++AI++L+EM +G P V ++N + L + G+L+ A L M
Sbjct: 712 ILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 771
Query: 394 -QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL--DFTMYSCLLKGYCEE 450
C+PN V+Y+ +I GLC GR+ + +L+ M+R ++ + Y+ L G C++
Sbjct: 772 VSRCCVPNVVTYSVLINGLCKV-GRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQ 830
Query: 451 GNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
+ ++ + R+ + ++D L
Sbjct: 831 SMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 864
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 197/403 (48%), Gaps = 19/403 (4%)
Query: 61 VIYEQTNPYHALFFFNWASNPNPNPNKYHHTT---PCYTAITDVLLSHSLISIAASLLKN 117
++ + +P A+ F P PN + ++T Y A DV + + +
Sbjct: 120 LLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDV---ERTLGFFRRIRSS 176
Query: 118 SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIK 175
S ++D+ I ++++ G A+ F + + +G + +YN+++ L + N +
Sbjct: 177 SRSVADYNI--VLQSLCRAGETARALEIF-RGEMARDGVAPTIVTYNTIINGLCKSNELG 233
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTM 232
E F ++V E PDV TY T+I CK G +E A+++ M+ + PN++ Y+ +
Sbjct: 234 AGMELFEELV-ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVL 292
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCR--PNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
ING CK G ++EA++ + EM + C PN +TYN+ + GLC EA LM +R
Sbjct: 293 INGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDG 352
Query: 291 GFK--DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ + T +++ GLC G+ D+A +++ P+V +Y ++NG CK K +
Sbjct: 353 SLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKME 412
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
A ++++ M +G+ P V +++ + + +D A+ LL M C PN V++N+II
Sbjct: 413 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 472
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
GLC + + + D ++ G D Y L+ G G
Sbjct: 473 DGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTG 515
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 183/422 (43%), Gaps = 62/422 (14%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKV 216
+ +YNS L L + + A E + ++ V PD T++T+I G CK G I+ A V
Sbjct: 323 IITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSV 382
Query: 217 FDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
FD M PN++ YN ++NG CK ++E A + M+++G P+ +TY+ ++ C
Sbjct: 383 FDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 442
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA------------------ 315
RVDEA L+ M G NV T S++ GLC + +A
Sbjct: 443 ASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKI 502
Query: 316 --------------VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
G +++A +PD ++ ING K+G A+ + M
Sbjct: 503 TYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELE 562
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L P +FN + + G ++A L ++M + P+ +++ +I GLC A G+++
Sbjct: 563 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKA-GQVEAA 621
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK--------GRLLKL 473
D++D M G + Y+ L+ G C+ G +E Q EMV+ G L+
Sbjct: 622 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 681
Query: 474 KNFLTRVVDALLLM-------W--------IVTGGSWISRFVFVHQVVVIMERTVEDGKR 518
+R DAL L+ W I+ G W S Q + ++E V G
Sbjct: 682 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSG--QTEQAITVLEEMVGKGHH 739
Query: 519 SE 520
+
Sbjct: 740 PD 741
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 166/344 (48%), Gaps = 37/344 (10%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKE--NVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+YN+L+ L + ++ A + P+V TY+ +I G CK+G I+ A+++
Sbjct: 744 TYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELI 803
Query: 218 DVMTVK-----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR--PNELTYNAMIYG 270
M K PN++ YN+ ++G CK+ + EA + M + + R P+ +T++ +I G
Sbjct: 804 QEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDG 863
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC G+ DEA + M G+ NV T+ ++ GLC K ++A + ++++ + PD
Sbjct: 864 LCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPD 923
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V +Y V+++ FCK DEA+ LL M +RG P V +FN++ L ++ + A +
Sbjct: 924 VITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFD 983
Query: 391 QMPQMDCL-PNFVSYNTIICGL-------------------------CMAKG--RMQDVE 422
M L P+ ++Y T+I GL C G ++ DV
Sbjct: 984 DMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVS 1043
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ RM+ D ++ L+ G C+ GN E + EMV K
Sbjct: 1044 RALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 1087
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 166/319 (52%), Gaps = 14/319 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ L R AE + PD + I G K+G + A +V++
Sbjct: 503 TYCTLIDGLFRTGRAGQAEALLDAMPD-----PDTYAFNCCINGLSKLGDVSRALQVYNR 557
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+ + +N +I G CK G E+A EM+ + +P+ +T+ A+I GLC G+
Sbjct: 558 MLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 617
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+ A+ ++ M G NV T+ +++ GLC G+ ++A +L ++ + PD +Y
Sbjct: 618 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 677
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ C+ ++D+A+ L+ E+++ G P ++N + L ++G+ ++AI +L++M
Sbjct: 678 LVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKG 737
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVE----DLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
P+ V+YNT+I LC A G +++ D+ R+ R + YS L+ G C+ G
Sbjct: 738 HHPDVVTYNTLIDSLCKA-GDLEEARRLHGDMSSRVSRCCVP-NVVTYSVLINGLCKVGR 795
Query: 453 VENVMQIAHEMVTKKGRLL 471
++ ++ EM+ K +L
Sbjct: 796 IDEARELIQEMMRKSCDVL 814
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 145/281 (51%), Gaps = 9/281 (3%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM----TVKPNLLAYNTMINGFCKKGELEEAKKCM 249
V+ Y +++ C+ G A ++F V P ++ YNT+ING CK EL +
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
E++ RG P+ +TYN +I LC G ++EA+ L M NV T+ ++ GLC V
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299
Query: 310 GKFDQAVGYLRNVMEANMN--PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK--PT 365
G+ D+A ++ + + + P++ +Y ++G CK + EA L++ +R L+ P
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 359
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+F+ + L + G++D A + M +PN ++YN ++ GLC A +M+ ++
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD-KMERAHAMI 418
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M+ G D YS L+ +C+ V+ +++ H M ++
Sbjct: 419 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR 459
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 127/256 (49%), Gaps = 33/256 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ L + A F ++ VP +V TY ++ G CK +E A + +
Sbjct: 856 TFSTLIDGLCKCGQTDEACNVFDDMIAGGYVP-NVVTYNVLMNGLCKTDKMERAHAMIES 914
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+++ Y+ +++ FCK ++EA + ++ M +RGC PN +T+N++I GLC + +
Sbjct: 915 MVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQ 974
Query: 277 VDEAKMLMAKMRL-NGFKDNVSTHKSMLKGL--------------------------CVV 309
EA + M L +G + T+ +++ GL C+
Sbjct: 975 SGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCIN 1034
Query: 310 G--KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G K L ++E + PD ++ ++I G CK G ++A +L +EM A+ L+P V
Sbjct: 1035 GLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVM 1094
Query: 368 SFNAVFRILVENGELD 383
+F A+ L + G+++
Sbjct: 1095 TFGALIDGLCKAGQVE 1110
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 5/231 (2%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
K + ++N +N K G +A + CRPN TY+ ++ G D +
Sbjct: 108 KHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGG-DVERT 166
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN-MNPDVKSYEVVINGF 341
L R+ +V+ + +L+ LC G+ +A+ R M + + P + +Y +ING
Sbjct: 167 LGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGL 226
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK + + L +E+ RG P V ++N + L + G+L+ A L M C+PN
Sbjct: 227 CKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNV 286
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL--DFTMYSCLLKGYCEE 450
V+Y+ +I GLC GR+ + +L+ M R ++ + Y+ L G C++
Sbjct: 287 VTYSVLINGLCKV-GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 336
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G K T+FSFN +LV++G +AI L + C PN +Y+T++ A G D
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGG---D 162
Query: 421 VEDLVDRMIRSGHNLDFTM-YSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
VE + R + Y+ +L+ C G ++I + + G
Sbjct: 163 VERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDG 211
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 188/366 (51%), Gaps = 19/366 (5%)
Query: 116 KNSNKLSDFFISK-----LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVR 170
K +N +S ISK I AY G A F++ K++ L + N+LL LVR
Sbjct: 112 KTNNPVSCLHISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVR 171
Query: 171 V---NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
+SI+L++ F +K V + +++ +I G C A +V M P
Sbjct: 172 FPSSHSIRLSKAVFTDFIKIGV-KINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPP 230
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+ + YNT+++G CKKG L EA+ + +M N+G PN T+N ++ G C G + EA ++
Sbjct: 231 DNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVI 290
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME-ANMNPDVKSYEVVINGFCK 343
M N + T+ M+ G C G+ +A+ LR ME ++PDV +Y +ING +
Sbjct: 291 ELMSQNSVVPDAWTYNVMISGFCKQGRIAEAM-RLREEMENLKLSPDVVTYNTLINGCFE 349
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G S+E L++EM RG+KP ++N + + V+ G++D +++M + CLP+ V+
Sbjct: 350 HGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVT 409
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YNT+I C G+M + L+D M R G +D + +L+ C E ++ AH++
Sbjct: 410 YNTLISWHCKV-GKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDE----AHDL 464
Query: 464 VTKKGR 469
+ R
Sbjct: 465 LCSARR 470
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 170/345 (49%), Gaps = 40/345 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L L + + A + + + + P + +T+ ++ G C++G ++ A V ++
Sbjct: 234 TYNTILDGLCKKGRLNEARDLLLDMKNKGLFP-NRTTFNILVVGCCRLGWLKEAANVIEL 292
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ V P+ YN MI+GFCK+G + EA + EM N P+ +TYN +I G +G
Sbjct: 293 MSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGS 352
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+E L+ +M G K N T+ M+K GK D+ +R + E+ PD+ +Y
Sbjct: 353 SEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNT 412
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD------------- 383
+I+ CK+GK DEA L+ EM +GLK + N + R L +LD
Sbjct: 413 LISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRG 472
Query: 384 ----------------------RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+A+ L +M + + +P+ ++YN++I GLC G+
Sbjct: 473 YFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQM-GKTNQA 531
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D +D ++ SG D Y+ ++ GYC+EG VE Q ++MV K
Sbjct: 532 IDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEK 576
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 167/312 (53%), Gaps = 7/312 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++YN ++ + I A ++ EN+ + PDV TY T+I G + G E K+
Sbjct: 303 WTYNVMISGFCKQGRIAEAMRLREEM--ENLKLSPDVVTYNTLINGCFEHGSSEEGFKLI 360
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +KPN + YN M+ F KKG+++E K + +M GC P+ +TYN +I C
Sbjct: 361 EEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKV 420
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++DEA LM +M G K + T +ML+ LC K D+A L + D SY
Sbjct: 421 GKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSY 480
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G+ K K+ +A+ L EM+ + + P++ ++N++ L + G+ ++AI L ++ +
Sbjct: 481 GTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLE 540
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+P+ ++YNTII G C +G+++ ++M+ D + LL G C+EG +E
Sbjct: 541 SGLVPDEITYNTIIHGYCQ-EGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLE 599
Query: 455 NVMQIAHEMVTK 466
+++ + ++K
Sbjct: 600 KALKLFNTWISK 611
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 30/288 (10%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+ N++L L R + A + + +VS Y T+I GY K A +++D
Sbjct: 444 TLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVS-YGTLIIGYFKHEKASQALRLWDE 502
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ YN+MI G C+ G+ +A ++E++ G P+E+TYN +I+G C G+
Sbjct: 503 MKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQ 562
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++A KM FK +V T ++L GLC G ++A+ + + D SY
Sbjct: 563 VEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNT 622
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL------- 389
+I CK + EA LL+EM + L P +++NA+ L + G + A +
Sbjct: 623 IILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682
Query: 390 -----------------KQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
++PQ + PN ++Y+ I LC ++GR +D
Sbjct: 683 KSENQFLELGKRQDARTSEIPQ-EPHPNAIAYSNKINELC-SQGRYKD 728
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 145/289 (50%), Gaps = 8/289 (2%)
Query: 150 KQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+++E CL +YN+L+ +V + A ++ ++ + DV T TM+R C+
Sbjct: 396 RKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDV-TLNTMLRALCR 454
Query: 207 MGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
++ A + + + ++Y T+I G+ K + +A + +EM + P+ +T
Sbjct: 455 ERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIIT 514
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YN+MI GLC G+ ++A + ++ +G + T+ +++ G C G+ ++A + ++
Sbjct: 515 YNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMV 574
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
E N PDV + ++ G CK G ++A+ L ++G S+N + L +
Sbjct: 575 EKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFG 634
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
A LL++M + P+ +YN I+ GL A GRM+D E+ + ++ G
Sbjct: 635 EAFDLLEEMEEKKLGPDCYTYNAILGGLTDA-GRMKDAEEFISKIAEKG 682
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 13/225 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y A+ + + K+ E + +YNS++ L ++ A + ++++
Sbjct: 483 LIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESG 542
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+VP ++ TY T+I GYC+ G +E A + + M KP+++ NT++ G CK+G LE+A
Sbjct: 543 LVPDEI-TYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKA 601
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K N +++G + ++YN +I LC R EA L+ +M + T+ ++L G
Sbjct: 602 LKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGG 661
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
L G+ A ++ + E + N F ++GK +A
Sbjct: 662 LTDAGRMKDAEEFISKIAEKGKSE---------NQFLELGKRQDA 697
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSLL L + + A+ F ++ K PDV +Y+ +I + G E A +V
Sbjct: 11 TYNSLLNALAKAGQCEEAQLLFEEL-KAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAE 69
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PNL YNT+++ K G+ +EA + + EM + GC P+ TYN +I L GR
Sbjct: 70 MQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR 129
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L A+MR G + T+ S++ GL VG+ +A+ L + PDV +Y
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G K G++ +A L +EM+ RG KP +F A+ L + G +D A+ LL +M +
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P V+YN +I G G + + +L+D M R+G D YSCL+ G + ++
Sbjct: 250 VKPGVVTYNALIAGFGKV-GDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEA 308
Query: 457 MQIAHEM 463
Q+ +M
Sbjct: 309 CQVLKKM 315
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 174/343 (50%), Gaps = 11/343 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
S LI + G G +AA+ +++ C L++YN+L+ L + A +
Sbjct: 48 SCLINSLGRAGKWEAAL---EVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAE 104
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+ ++N PDV TY +I K G + A +F M + P+ YN++I G K G
Sbjct: 105 M-RDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVG 163
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++A + + EM GC P+ +TY+++I GL +G +A L +M+ G K + T
Sbjct: 164 RSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFT 223
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ L G+ D A+ L + E + P V +Y +I GF K+G EA +LL EM+
Sbjct: 224 ALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRN 283
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G KP V +++ + L++ +LD A +LK+M + C P+ ++YNT+I GL A G + D
Sbjct: 284 GCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKA-GLLND 342
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L DRM G N D YS L+ + VE+ + EM
Sbjct: 343 AGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM 385
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 169/376 (44%), Gaps = 40/376 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G G + A F + ++ ++YNSL+ L +V + A E ++ +
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG 179
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------------------- 221
PPDV TY+++I G K G A K+F M
Sbjct: 180 C-PPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDA 238
Query: 222 -----------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
VKP ++ YN +I GF K G+L EA ++EM GC+P+ +TY+ +I G
Sbjct: 239 LELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITG 298
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
L ++DEA ++ KM G + T+ +++ GL G + A + NPD
Sbjct: 299 LIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPD 358
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V +Y +I K + + A L +EM + G++P +F++ ++ +L + G++D A L
Sbjct: 359 VVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFS 418
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M P+ ++YN + L GR ++ + + M SG D Y LL G +
Sbjct: 419 EMRGKGLSPDVITYNAFLNSLGRG-GRFKEARKIFEDMKESGLLPDVATYDALLLGLSKT 477
Query: 451 GNVENVMQIAHEMVTK 466
V++ + E++ +
Sbjct: 478 KEVDDACGLLKELIEQ 493
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 153/302 (50%), Gaps = 8/302 (2%)
Query: 150 KQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
K++E C +YN+L+ L + + A F ++ K PDV TY+T+I K
Sbjct: 313 KKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRM-KSKGCNPDVVTYSTLITALGK 371
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+E+A +F+ M ++P+L Y ++I K G++++A + +EM +G P+ +T
Sbjct: 372 AARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVIT 431
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YNA + L GR EA+ + M+ +G +V+T+ ++L GL + D A G L+ ++
Sbjct: 432 YNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELI 491
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
E D ++ + G DEA LL+ ++GL P S+NA+ L + G +
Sbjct: 492 EQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVS 551
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A L+ + + P+ VSY+++I L G++ +L++ M + G L YS L
Sbjct: 552 EAFNTLEDLKEQGGKPDIVSYSSLISALGQT-GQIDTAFELLEEMSKRGLKLSPRSYSNL 610
Query: 444 LK 445
++
Sbjct: 611 VR 612
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 130/240 (54%), Gaps = 1/240 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN++ YN+++N K G+ EEA+ E+ P+ ++Y+ +I L G+ + A +
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+A+M+ G K N+ T+ +++ L G+FD+A+ L + + PDV++Y +I+ K
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+ EA +L EMR RG P F++N++ L + G +A+ LL++M + C P+ ++
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+++I GL G L M R G D ++ L+ + G V++ +++ EM
Sbjct: 187 YSSLITGL-GKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 138/283 (48%), Gaps = 15/283 (5%)
Query: 112 ASLLKNSNKLSDFFISK-----------LIKAYGDRGNVKAAIFWFHQAKQIENGACLYS 160
A LL ++ +L D SK LI A G V++A F + + + L++
Sbjct: 337 AGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFT 396
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y S++ VL + + A+ F ++ + + PDV TY + + G + A+K+F+ M
Sbjct: 397 YCSIITVLGKAGQVDDADRLFSEM-RGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDM 455
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P++ Y+ ++ G K E+++A + E++ +GC + L ++ + L G V
Sbjct: 456 KESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNV 515
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DEA L+ G S++ +++ L G+ +A L ++ E PD+ SY +
Sbjct: 516 DEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSL 575
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
I+ + G+ D A LL+EM RGLK + S++ + R L + G
Sbjct: 576 ISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
M+ +P+V +Y ++N K G+ +EA L +E++A P V S++ + L G+
Sbjct: 1 MKGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKW 60
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-GRMQDVEDLVDRMIRSGHNLDFTMYS 441
+ A+ ++ +M C PN +YNT++ C+ K G+ + L+ M +G D Y+
Sbjct: 61 EAALEVVAEMQAKGCKPNLWTYNTLVD--CLGKAGQFDEALRLLAEMRDNGCVPDVRTYN 118
Query: 442 CLLKGYCEEGNVENVMQIAHEM 463
CL+ + G + + EM
Sbjct: 119 CLISTLGKAGRLSEAFTLFAEM 140
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 164/301 (54%), Gaps = 4/301 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+LLG L N + A F ++V+E + P+ Y T++ G K G E + +
Sbjct: 134 TFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRI 193
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M KP++ Y+ +I+ CK L+ A +NEM + PN TYN++I GLC G+
Sbjct: 194 MEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQ 253
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ K L+++M NV T ++ GLC GK + A +R+++E + PD+ +Y
Sbjct: 254 WEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSA 313
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G+C G+ D A + +R +G+KP +FS++ + + L +A+ L ++ Q
Sbjct: 314 IMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKG 373
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+Y+TI+ GL + GR+ D + + D M+R G D ++S LL GY + G VE
Sbjct: 374 LKPDTVTYSTILHGL-IEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEA 432
Query: 457 M 457
M
Sbjct: 433 M 433
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 169/331 (51%), Gaps = 5/331 (1%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG+ + + +Q + +Y+ ++ L + ++ A +++ ++N+ PP++
Sbjct: 181 RGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNI-PPNIF 239
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY ++I G CK+G E K + M + PN+ ++ +I+G CK+G++E+A + M M
Sbjct: 240 TYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHM 299
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ +G P+ +TY+A++ G C+ G+VD A+ + +R G K N+ ++ ++ G C
Sbjct: 300 IEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNL 359
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+A+ + + + PD +Y +++G ++G+ +A + EM G P + + +
Sbjct: 360 AKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTL 419
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ G ++ A+LL ++ + N Y +I GLC R+++ + +++ G
Sbjct: 420 LFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLC-KNDRVREAHAIFEKLPSIG 478
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D Y+ ++ G+C EG + V I +M
Sbjct: 479 LIPDVRTYNVMITGFCREGLFDEVKGILRKM 509
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 155/290 (53%), Gaps = 5/290 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++++ L+ L + ++ A+E ++ E V PD+ TY+ ++ GYC G ++ A++VF
Sbjct: 273 VHTFSILIDGLCKEGKVEDADEVMRHMI-EKGVEPDIITYSAIMDGYCLRGQVDRARRVF 331
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+V+ +KPN+ +Y+ +ING+CKK L +A + E+ +G +P+ +TY+ +++GL
Sbjct: 332 NVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEV 391
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+ +AK + +M G ++ H ++L G G ++A+ + + ++ Y
Sbjct: 392 GRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFY 451
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
VVING CK + EA ++ +++ + GL P V ++N + G D +L++M
Sbjct: 452 TVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMED 511
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
C N ++YN I+ G ++ ++ + M G + D T L+
Sbjct: 512 NGCPANNITYNVIMQGF-FRSNKISEIVSFMKEMAGRGFSFDATTTGVLI 560
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 150/293 (51%), Gaps = 6/293 (2%)
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLA-- 228
V+ + A FH++V+ +P V ++ + + M +F M + ++
Sbjct: 40 VSCLDDAVSLFHRMVRMKPLP-SVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDS 98
Query: 229 -YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
N + N +C + ++ A + + G N +T+N ++ GL +V +A +L K+
Sbjct: 99 ILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKL 158
Query: 288 -RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
R + N + +++ GL G ++ + LR + + N PDV++Y +VI+ CK
Sbjct: 159 VREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDIN 218
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
D AI+LL EM+ + + P +F++N++ L + G+ ++ LL +M ++ PN +++
Sbjct: 219 LDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSI 278
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+I GLC +G+++D ++++ MI G D YS ++ GYC G V+ ++
Sbjct: 279 LIDGLC-KEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRV 330
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 177/341 (51%), Gaps = 10/341 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIK + + A+ F + ++ L ++++LL L + + A FFHQI K N
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPN 176
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V+ +TT++ G C+ G + A + D M ++PN + Y T+++G CK G+ A
Sbjct: 177 VI-----AFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSA 231
Query: 246 KKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ +M +PN + Y+A+I GL +GR +A+ L ++M+ G N+ T+ M+
Sbjct: 232 LNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C G++ +A LR + E M+PDV ++ V+IN K GK EA L EM RG+ P
Sbjct: 292 GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP 351
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++N++ + LD A + M C P+ ++++ +I G C AK R+ D L
Sbjct: 352 NTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAK-RVDDGMKL 410
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ M R G + Y+ L+ G+C+ GN+ + + EM++
Sbjct: 411 LHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMIS 451
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 168/320 (52%), Gaps = 16/320 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+++ L+ LV+ AEE +++++ ++P + TY +MI G+ K ++ A+++F +
Sbjct: 320 TFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTI-TYNSMIDGFSKQNRLDAAERMFYL 378
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ ++ +I+G+C +++ K ++EM RG N +TY +I+G C G
Sbjct: 379 MATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGN 438
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN-------- 328
++ A L+ +M +G NV T ++L GLC GK A+ + + ++ M+
Sbjct: 439 LNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFN 498
Query: 329 ---PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
PDV++Y ++I G GK EA L +EM RGL P ++N+V L + LD A
Sbjct: 499 DVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEA 558
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ M P+ V++ T+I G C GR+ D ++ M R G + Y L+
Sbjct: 559 TQMFDSMGSKGFSPDVVTFTTLINGYCKV-GRVGDGLEVFCEMGRRGIVANAITYRTLIH 617
Query: 446 GYCEEGNVENVMQIAHEMVT 465
G+C+ GN+ + I EM++
Sbjct: 618 GFCQVGNINGALDIFQEMIS 637
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 163/320 (50%), Gaps = 16/320 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++++ L + A+ F ++ +E + P++ TY MI G+C G A+++ M
Sbjct: 251 YSAIIDGLWKDGRQTDAQNLFSEM-QEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREM 309
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ ++ +IN K+G+ EA++ NEM+ RG PN +TYN+MI G R+
Sbjct: 310 FERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRL 369
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A+ + M G +V T ++ G C + D + L + + + +Y +
Sbjct: 370 DAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTL 429
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM----- 392
I+GFC++G + A+ LL+EM + G+ P V + N + L NG+L A+ + K M
Sbjct: 430 IHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489
Query: 393 ------PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
P D P+ +YN +ICGL + +G+ + E+L + M G D Y+ ++ G
Sbjct: 490 DLDASHPFNDVEPDVQTYNILICGL-INEGKFSEAEELYEEMPHRGLVPDTITYNSVIDG 548
Query: 447 YCEEGNVENVMQIAHEMVTK 466
C++ ++ Q+ M +K
Sbjct: 549 LCKQSRLDEATQMFDSMGSK 568
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 152/313 (48%), Gaps = 16/313 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS++ + N + AE F+ + + PDV T++ +I GYC +++ K+
Sbjct: 355 TYNSMIDGFSKQNRLDAAERMFYLMATKGC-SPDVITFSILIDGYCGAKRVDDGMKLLHE 413
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ + N + Y T+I+GFC+ G L A + EM++ G PN +T N ++ GLC NG+
Sbjct: 414 MSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGK 473
Query: 277 VDEA-----KMLMAKMRLNG---FKD---NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+ +A M +KM L+ F D +V T+ ++ GL GKF +A +
Sbjct: 474 LKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHR 533
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ PD +Y VI+G CK + DEA + M ++G P V +F + + G +
Sbjct: 534 GLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDG 593
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ + +M + + N ++Y T+I G C G + D+ MI SG D +L
Sbjct: 594 LEVFCEMGRRGIVANAITYRTLIHGFCQV-GNINGALDIFQEMISSGVYPDTITIRNMLT 652
Query: 446 GYCEEGNVENVMQ 458
G + ++ +Q
Sbjct: 653 GLWSKEELKRAVQ 665
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 15/277 (5%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI Y V + H+ + A +Y +L+ ++ ++ A + +++
Sbjct: 392 SILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMIS 451
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------VKPNLLAYNTM 232
V P +V T T++ G C G +++A ++F VM V+P++ YN +
Sbjct: 452 SGVCP-NVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNIL 510
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
I G +G+ EA++ EM +RG P+ +TYN++I GLC R+DEA + M GF
Sbjct: 511 ICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGF 570
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+V T +++ G C VG+ + + + + +Y +I+GFC++G + A+
Sbjct: 571 SPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALD 630
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+ +EM + G+ P + + L EL RA+ L
Sbjct: 631 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 105/209 (50%), Gaps = 6/209 (2%)
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N ++ +I C ++ A K+ GF ++ T ++L GLCV + +A+ +
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ + P+V ++ ++NG C+ G+ EA++LL M GL+P ++ + + +
Sbjct: 170 HQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 225
Query: 380 GELDRAILLLKQMPQMDCL-PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
G+ A+ LL++M ++ + PN V Y+ II GL GR D ++L M G + +
Sbjct: 226 GDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGL-WKDGRQTDAQNLFSEMQEKGISPNLF 284
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
Y+C++ G+C G ++ EM +K
Sbjct: 285 TYNCMINGFCSSGRWSEAQRLLREMFERK 313
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G + D A+ ++ + P V + ++ ++ + D ISL ++M R +
Sbjct: 50 GFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPC 109
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++SF + + +L A+ ++ ++ P+ V+++T++ GLC VED
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLC--------VEDR 161
Query: 425 VDRMIRSGHNL---DFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
V + H + + ++ L+ G C EG V + + MV
Sbjct: 162 VSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMV 204
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 191/358 (53%), Gaps = 6/358 (1%)
Query: 110 IAASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
AA L N+ SD ++ S LI AY + G ++ AI + ++ + + +L L
Sbjct: 39 FAAVLETXGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHL 98
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPN 225
+++ KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P+
Sbjct: 99 MKLKYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 157
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+++YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D A L
Sbjct: 158 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFD 217
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M + G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 218 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 277
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+A L+ EM +GLKP F++ + + G+LD A K+M Q + + V+Y
Sbjct: 278 DLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYT 337
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 338 ALISGLCQ-EGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEM 394
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 158/291 (54%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F + + SYN+L+ +R+ L E F
Sbjct: 124 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD--LDEGFRLK 181
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK ++ A +FD M VK PN + + T+I+G CK
Sbjct: 182 SAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKN 241
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M + G K + T+
Sbjct: 242 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTY 301
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G D A + + +++ N+ D +Y +I+G C+ G+S +A +L+EM +
Sbjct: 302 TTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 361
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GLKP ++ + + G++ + LLK+M + P+ V+YN ++ G
Sbjct: 362 VGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 139/287 (48%), Gaps = 16/287 (5%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC---- 248
D+ ++ +I Y + G + +A + + + + ++T C+K LE K
Sbjct: 52 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDT-----CRK-VLEHLMKLKYFK 105
Query: 249 -----MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
E++ G + +N +++ C +G + A+ + + G + +V ++ +++
Sbjct: 106 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 165
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G +G D+ ++ + + PDV +Y V+ING CK K D A L EM +GL
Sbjct: 166 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLV 225
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +F + +NG +D A+ + KQM LP+ ++YNT+I GLC KG ++ D
Sbjct: 226 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLC-KKGDLKQAHD 284
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
L+D M G D Y+ L+ G C+EG+++ + M+ + RL
Sbjct: 285 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 331
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 202/401 (50%), Gaps = 27/401 (6%)
Query: 88 YHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNKLSDFFI 126
+ HT Y + L +H ++S A SL++ + SD ++
Sbjct: 1 FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYV 60
Query: 127 -SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
S LI AY + G + AI + ++ + + +L L+++ KL F+ +I+
Sbjct: 61 FSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 120
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
E P + + ++ +CK G I A+ VFD +T ++P++++YNT++NG+ + G+L
Sbjct: 121 -ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 179
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+E + + M+ G +P+ TY+ +I GLC ++D+A L +M + G N T ++
Sbjct: 180 DEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTL 239
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G +A L+ EM +GL
Sbjct: 240 IDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 299
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KP F++ + + G+LD A K+M Q + + V+Y +I GLC +GR D E
Sbjct: 300 KPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC-QEGRSVDAE 358
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ M+ D Y+ ++ +C++G+V ++ EM
Sbjct: 359 KMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 399
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 158/291 (54%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F + + SYN+L+ +R+ L E F
Sbjct: 129 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD--LDEGFRLK 186
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK +++A ++FD M VK PN + + T+I+G CK
Sbjct: 187 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKN 246
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + M+++ P+ +TYN +IYGLC G + +A L+ +M + G K + T+
Sbjct: 247 GRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTY 306
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G D A + + +++ N+ D +Y +I+G C+ G+S +A +L+EM +
Sbjct: 307 TTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 366
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
LKP ++ + + G++ + LLK+M + P+ V+YN ++ G
Sbjct: 367 VDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 151/319 (47%), Gaps = 17/319 (5%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVK-ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
SL+ V+V A F I++ + D+ ++ +I Y + G +A + + +
Sbjct: 25 KSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVFSGLITAYLESGFXRDAIECYRLT 84
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKC---------MNEMMNRGCRPNELTYNAMIYGL 271
+ ++T C+K LE K E++ G + +N +++
Sbjct: 85 REHKLWVPFDT-----CRK-VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRF 138
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +G + A+ + + G + +V ++ +++ G +G D+ ++ + + PDV
Sbjct: 139 CKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDV 198
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y V+ING CK K D+A L EM +GL P +F + +NG +D A+ + K+
Sbjct: 199 YTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKR 258
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M LP+ ++YNT+I GLC KG ++ DL+D M G D Y+ L+ G C+EG
Sbjct: 259 MLSQSLLPDLITYNTLIYGLC-KKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 317
Query: 452 NVENVMQIAHEMVTKKGRL 470
+++ + M+ + RL
Sbjct: 318 DLDTAFEHRKRMIQENIRL 336
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 222/437 (50%), Gaps = 33/437 (7%)
Query: 52 CLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA 111
+ +V V++ N HAL FF W N + H + I ++L S ++ A
Sbjct: 9 SIDHELVYNVLHSAKNSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHA 64
Query: 112 ASLLKNSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLG 166
+L + K D ++ +I +YG G V+ ++ F + +++ + SY++L
Sbjct: 65 RCILLDMPKKGLEWDEDLWVL-MIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFK 123
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVK 223
V++R +A+ +F++++ E + P T+ M+ G+ G +E A + F+ M +
Sbjct: 124 VILRRGRYMMAKRYFNKMLSEG-IEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIM 182
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ YNTM+NG+C+ ++EEA+K EM R P +TY +I G RVD+A L
Sbjct: 183 PDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRL 242
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFC 342
+ +M+ G K N T+ ++L GLC K +A L+ ++E + P D + +I+G C
Sbjct: 243 VEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISGQC 302
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQM------ 392
K G D A ++LK M ++ +V + + +L+EN GE D+AI LL ++
Sbjct: 303 KAGDLDAAANVLKAM----IRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDII 358
Query: 393 --PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
PQ +YN +I LC G+ E LV ++++ G D T + L++G+ +E
Sbjct: 359 LRPQSTLHMESSAYNPLIEYLC-NNGQTAKAEALVRQLMKLGVQ-DPTALNTLIRGHSQE 416
Query: 451 GNVENVMQIAHEMVTKK 467
G+ ++ ++ M+ +K
Sbjct: 417 GSPDSAFELLKIMLRRK 433
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 194/395 (49%), Gaps = 44/395 (11%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
S+ A +LK S ++ LIK +G VK A+ FH K + G L SY +L+
Sbjct: 363 SVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKAL-HFHD-KLLAQGFQLNQVSYATLIN 420
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
+ ++ + A + +I + P+V Y+T+I CK ++ A +F MTVK
Sbjct: 421 GVCKIGDTRGAIKLLRKI-DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 479
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
+++ Y+T+I GFC G+L+EA +NEM+ + P+ TY ++ L G+V EAK +
Sbjct: 480 ADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSV 539
Query: 284 MA-----------------------------------KMRLNGFKDNVSTHKSMLKGLCV 308
+A M L G +V T+ ++ G C
Sbjct: 540 LAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 599
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
D+A+ + + + NM PD +Y +++G CK G+ L+ EMR RG V +
Sbjct: 600 SKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVIT 659
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N++ L +NG LD+AI L +M PN ++ ++ GLC GR++D +++ +
Sbjct: 660 YNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKG-GRLKDAQEVFQDL 718
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G++LD +Y+ ++ G+C++G +E + + +M
Sbjct: 719 LTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKM 753
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 203/417 (48%), Gaps = 47/417 (11%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLL 165
+S+ +LK ++ LIK +G VK A+ FH K + G L SY +L+
Sbjct: 48 LSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEAL-HFHD-KLLAQGFQLNQVSYATLI 105
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK-- 223
+ R+ + A +F +I + P+V Y T+I CK ++ A +F MTVK
Sbjct: 106 NGVCRIGDTRAAIKFLRKI-DGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGI 164
Query: 224 -PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
N++ Y+T+I GFC G+L+EA +N M+ + PN TYN ++ LC G+V EAK
Sbjct: 165 SANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKS 224
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
++A M K NV T+ +++ G +V + +A + + PDV SY ++INGFC
Sbjct: 225 VLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFC 284
Query: 343 KIGKSDEAISLLKEM----------------------------------RARGLKPTVFS 368
KI + D+A++L KEM +G++P +F+
Sbjct: 285 KIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFT 344
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
N + G++ +L ++ + P+ V+ NT+I GLC+ KG+++ D++
Sbjct: 345 LNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCL-KGQVKKALHFHDKL 403
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLK-NFLTRVVDAL 484
+ G L+ Y+ L+ G C+ G+ +++ ++ GRL K + ++DAL
Sbjct: 404 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKI---DGRLTKPNVEMYSTIIDAL 457
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 184/375 (49%), Gaps = 40/375 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+K++ ++ + A+ H+ + L++ N L+ + I +I+K
Sbjct: 311 NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILK 370
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELE 243
PP T T+I+G C G ++ A D + + N ++Y T+ING CK G+
Sbjct: 371 RGY-PPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 429
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A K + ++ R +PN Y+ +I LC V EA L ++M + G +V T+ +++
Sbjct: 430 GAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 489
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C+VGK +A+G L ++ +NPDV++Y ++++ K GK EA S+L M +K
Sbjct: 490 YGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVK 549
Query: 364 PTVFSFNAV-------------------------------FRILV----ENGELDRAILL 388
P VF++N + + IL+ ++ +D A+ L
Sbjct: 550 PDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNL 609
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
K+M Q + +P+ V+Y++++ GLC + GR+ V DL+D M G D Y+ L+ G C
Sbjct: 610 FKEMHQKNMVPDTVTYSSLVDGLCKS-GRISYVWDLIDEMRDRGQPADVITYNSLIDGLC 668
Query: 449 EEGNVENVMQIAHEM 463
+ G+++ + + ++M
Sbjct: 669 KNGHLDKAIALFNKM 683
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 175/347 (50%), Gaps = 13/347 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLKN------SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQ 148
Y+ I D L + L+S A L S + + S LI + G +K AI ++
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTY--STLIYGFCIVGKLKEAIGLLNE 507
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
+ +Y L+ L + +K A+ ++K V PDV TY T++ GY +
Sbjct: 508 MVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKA-CVKPDVFTYNTLMNGYLLVY 566
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
++ A+ VF+ M+ V P++ Y +INGFCK ++EA EM + P+ +TY+
Sbjct: 567 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYS 626
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+++ GLC +GR+ L+ +MR G +V T+ S++ GLC G D+A+ + +
Sbjct: 627 SLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQ 686
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ P+ ++ ++++G CK G+ +A + +++ +G V+ +N + + G L+ A
Sbjct: 687 GIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEA 746
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ +L +M + C+PN V+++ II L K E L+ +MI G
Sbjct: 747 LTMLSKMEENGCIPNAVTFDIIINAL-FKKDENDKAEKLLRQMIARG 792
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 190/416 (45%), Gaps = 53/416 (12%)
Query: 95 YTAITDVLLSHSLISIAASLLK-------NSNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
Y I D L + L+S A L ++N ++ S LI + G +K A+ +
Sbjct: 136 YNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVT---YSTLIYGFCIVGKLKEALGLLN 192
Query: 148 QA--KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
K I C +YN L+ L + +K A+ ++K V +V TY+T++ GY
Sbjct: 193 VMVLKTINPNVC--TYNILVDALCKEGKVKEAKSVLAVMLKA-CVKSNVITYSTLMDGYF 249
Query: 206 KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN-------- 254
+ ++ A+ VF+ M+ V P++ +YN MINGFCK +++A EM+
Sbjct: 250 LVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQ 309
Query: 255 --------------------------RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
+G +P+ T N +I C G++ ++AK+
Sbjct: 310 FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKIL 369
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G+ + T +++KGLC+ G+ +A+ + ++ + SY +ING CKIG +
Sbjct: 370 KRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 429
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
AI LL+++ R KP V ++ + L + + A L +M + V+Y+T+I
Sbjct: 430 GAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 489
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G C+ G++++ L++ M+ N D Y+ L+ +EG V+ + M+
Sbjct: 490 YGFCIV-GKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVML 544
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 140/275 (50%), Gaps = 8/275 (2%)
Query: 95 YTAITDVLLSHSLI----SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT + D L + S+ A +LK K F + L+ Y VK A F+
Sbjct: 520 YTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMS 579
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ +++Y L+ + + A F ++ ++N+VP D TY++++ G CK G I
Sbjct: 580 LMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVP-DTVTYSSLVDGLCKSGRI 638
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ D M + +++ YN++I+G CK G L++A N+M ++G RPN T+ +
Sbjct: 639 SYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTIL 698
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ GLC GR+ +A+ + + G+ +V + M+ G C G ++A+ L + E
Sbjct: 699 LDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGC 758
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
P+ +++++IN K ++D+A LL++M ARGL
Sbjct: 759 IPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 182/424 (42%), Gaps = 72/424 (16%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
LL +L+ + LI G+ +AAI + + + YN+++ L +
Sbjct: 89 LLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQL 148
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYN 230
+ A F ++ + + +V TY+T+I G+C +G ++ A + +VM T+ PN+ YN
Sbjct: 149 VSEAYGLFSEMTVKGI-SANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYN 207
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+++ CK+G+++EAK + M+ + N +TY+ ++ G + V +A+ + M L
Sbjct: 208 ILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 267
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA------------------------- 325
G +V ++ M+ G C + + D+A+ + ++ +
Sbjct: 268 GVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAV 327
Query: 326 ---------NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ PD+ + ++IN FC +G+ S+L ++ RG P+ + N + + L
Sbjct: 328 SLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGL 387
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA-------------KGRM----- 418
G++ +A+ ++ N VSY T+I G+C GR+
Sbjct: 388 CLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNV 447
Query: 419 ----------------QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+ L M G + D YS L+ G+C G ++ + + +E
Sbjct: 448 EMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNE 507
Query: 463 MVTK 466
MV K
Sbjct: 508 MVLK 511
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 103/249 (41%), Gaps = 56/249 (22%)
Query: 277 VDEAKML--MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
VD+A L + K+ G+ + T +++KGLC+ G+ +A+ + ++ + SY
Sbjct: 42 VDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSY 101
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ING C+IG + AI L+++ R KP
Sbjct: 102 ATLINGVCRIGDTRAAIKFLRKIDGRLAKP------------------------------ 131
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
N YNTII LC + + + L M G + + YS L+ G+C G ++
Sbjct: 132 -----NVEMYNTIIDALCKYQ-LVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLK 185
Query: 455 NVMQIAHEMV------------------TKKGRLLKLKNFLTRVVDALLLMWIVTGGSWI 496
+ + + MV K+G++ + K+ L ++ A + ++T + +
Sbjct: 186 EALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLM 245
Query: 497 SRFVFVHQV 505
+ V++V
Sbjct: 246 DGYFLVYEV 254
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 200/444 (45%), Gaps = 52/444 (11%)
Query: 65 QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK---- 120
QT P A+ FF WA KY H CY ++ DVL ++ ++ S+ +
Sbjct: 121 QTKPDVAIRFFTWAGKQK----KYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLI 176
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAE 178
++ + + LIK++G+ G V+ ++ + + K ENG L+SYN L+ LV I+ AE
Sbjct: 177 MTVYSSNSLIKSFGNLGMVEEVLWVWRRMK--ENGIEPSLFSYNFLVNGLVNSKFIESAE 234
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA---KKVFDVMTVKPNLLAYNTM--- 232
F ++++ + PDV TY TMI+GYC++G A K ++ V P+ + Y T+
Sbjct: 235 RVF-EVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQA 293
Query: 233 --------------------------------INGFCKKGELEEAKKCMNEMMNRGCRPN 260
I G CK G+ E M+++GC+ N
Sbjct: 294 CYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKAN 353
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
Y A+I G + EA +L +M+ G + + T+ ++ LC G+ D+A+ Y+
Sbjct: 354 VAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYME 413
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ + Y +I+G K G+ DEA + EM +G P + +NA+ L + G
Sbjct: 414 FCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCG 473
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
++D A+ L K+M C +Y +I GL + R ++ L D MI G +
Sbjct: 474 KIDEALALSKRMEVDGCDQTVYTYTILITGL-FREHRNEEALTLWDLMIDKGITPTAAAF 532
Query: 441 SCLLKGYCEEGNVENVMQIAHEMV 464
L G C G V +I EM
Sbjct: 533 RALSTGLCLSGKVARACKILDEMA 556
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 168/351 (47%), Gaps = 6/351 (1%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQA-KQIENGACLYSYNSLLGVLVRVNSIKLAE 178
KLS F+S ++++ + AI +F A KQ + L Y SL+ VL + +
Sbjct: 105 KLSPSFVSFILRSTELQTKPDVAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVK 164
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING 235
F + KE + V + ++I+ + +GM+E V+ M ++P+L +YN ++NG
Sbjct: 165 SVFSKF-KEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNG 223
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
+E A++ M N P+ +TYN MI G C G+ +A + M L +
Sbjct: 224 LVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPD 283
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
T+ ++++ G FD +G + E + Y +VI G CK GK E ++ +
Sbjct: 284 KITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFE 343
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
M ++G K V + A+ + G + A+LL K+M + P+ V+Y I+ LC +
Sbjct: 344 NMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKS- 402
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GR+ + + ++ G ++ YS L+ G + G V+ +I +EMV K
Sbjct: 403 GRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKK 453
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 165/338 (48%), Gaps = 14/338 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV----RVNSIKLAEEFFHQI 184
LI+A G+ + + +H+ + + Y+ ++G L RV + E +
Sbjct: 290 LIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKG 349
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
K NV + YT +I K G + A +F M ++P+ + Y ++N CK G
Sbjct: 350 CKANV-----AIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGR 404
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L+EA + M +G N + Y+++I GL +GRVDEA+ + +M G + + +
Sbjct: 405 LDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNA 464
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ L GK D+A+ + + + V +Y ++I G + +++EA++L M +G
Sbjct: 465 LIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKG 524
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ PT +F A+ L +G++ RA +L +M M +P +++ +I LC A GR+++
Sbjct: 525 ITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPE-TAFDDMINILCKA-GRIKEA 582
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
L D ++ G + + + L+ + GN + +++
Sbjct: 583 CKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKL 620
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 205/409 (50%), Gaps = 45/409 (11%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE 153
C++ + + S S+ A +LK + LIK +G V A+ +FH K +
Sbjct: 102 CFSQLGHIKFS---FSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKAL-YFHD-KVVA 156
Query: 154 NGACL--YSYNSLLGVLVRVNSIKLAEEFFHQI----VKENVV----------------- 190
G L SY +L+ L RV K A + ++ V+ NVV
Sbjct: 157 QGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVND 216
Query: 191 -------------PPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMIN 234
PDV TY+++I G+C +G ++ A +F+ M + PN+ ++ +I+
Sbjct: 217 AFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILID 276
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
GFCK+G++ EAK + MM + + + +TYN+++ G C+ +V++AK L M G
Sbjct: 277 GFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTP 336
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+V ++ M+ G C + D+A+ + + P+V +Y +++G CK G++ A+ L+
Sbjct: 337 DVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELV 396
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
EM RG + ++N++ + +N +D+AI+LL ++ + P+ +Y +I GLC
Sbjct: 397 DEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKV 456
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GR+ D + + + ++ G++ + Y+ L+ G+C +G + + + +M
Sbjct: 457 -GRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKM 504
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 179/345 (51%), Gaps = 9/345 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSDFFI--SKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ I D + L++ A L S ++S + S LI + G +K A+ F++
Sbjct: 201 YSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMI 260
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+Y+++ L+ + ++ A+ ++K+NV DV TY +++ GYC + +
Sbjct: 261 SDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNV-KLDVVTYNSLMDGYCLVKQV 319
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
AK +F+VM V P++ +Y+ MINGFCK ++EA K EM + PN +TYN++
Sbjct: 320 NKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSL 379
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ GLC +GR A L+ +M G N+ T+ S+L +C D+A+ L + E +
Sbjct: 380 VDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGI 439
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD+ +Y V+ING CK+G+ D+A + +++ +G P ++++ ++ G D +
Sbjct: 440 QPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLA 499
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+L +M C+PN ++Y +I L K E L+ MI G
Sbjct: 500 MLSKMKDNGCIPNAITYEILIHSL-FEKDENDKAEKLLREMIARG 543
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 158/334 (47%), Gaps = 40/334 (11%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N L+ ++ IK + F +I+K+ PD T+T +I+G C G + A D +
Sbjct: 97 NLLMNCFSQLGHIKFSFSVFAKILKKGY-HPDAVTFTILIKGLCLKGEVHKALYFHDKVV 155
Query: 222 VKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ + ++Y T+ING C+ GE + A + + + + RPN + Y+ +I +C + V+
Sbjct: 156 AQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVN 215
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A L +M +V T+ S++ G CVVGK AV ++ N+NP+V ++ ++I
Sbjct: 216 DAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILI 275
Query: 339 NGFCKIGKSDEAI-----------------------------------SLLKEMRARGLK 363
+GFCK GK EA SL M RG+
Sbjct: 276 DGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVT 335
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V+S++ + + +D A+ L ++M PN V+YN+++ GLC + GR +
Sbjct: 336 PDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKS-GRTSCALE 394
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
LVD M G + Y+ +L C+ +V+ +
Sbjct: 395 LVDEMHDRGQPSNIITYNSILDAICKNNHVDKAI 428
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 39/241 (16%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ V + A+ F+ ++ + V PDV +Y+ MI G+CK+ M++ A K+F+
Sbjct: 305 TYNSLMDGYCLVKQVNKAKSLFN-VMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEE 363
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG---------------CR--- 258
M K PN++ YN++++G CK G A + ++EM +RG C+
Sbjct: 364 MHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNH 423
Query: 259 -----------------PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
P+ TY +I GLC GR+D+A+ + + + G+ N+ T+ S
Sbjct: 424 VDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTS 483
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C G FD+ + L + + P+ +YE++I+ + ++D+A LL+EM ARG
Sbjct: 484 LINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543
Query: 362 L 362
L
Sbjct: 544 L 544
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 137/266 (51%), Gaps = 5/266 (1%)
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
K N +PP + + ++ K + A + M +KP+ + N ++N F + G +
Sbjct: 51 KNNPIPPAIE-FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHI 109
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ + +++ +G P+ +T+ +I GLC+ G V +A K+ GF+ + ++ ++
Sbjct: 110 KFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTL 169
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC VG+ AV LR V + P+V Y +I+ CK ++A L EM ++ +
Sbjct: 170 INGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRI 229
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P V +++++ G+L A+ L +M + PN +++ +I G C +G++++ +
Sbjct: 230 SPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFC-KEGKVREAK 288
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYC 448
+++ M++ LD Y+ L+ GYC
Sbjct: 289 NVLAVMMKKNVKLDVVTYNSLMDGYC 314
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 123/247 (49%), Gaps = 1/247 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P + + ++ K + + A +M G +P+ +T N ++ G + + +
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
AK+ G+ + T ++KGLC+ G+ +A+ + V+ D SY +ING C+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+G++ A+ LL+ + + ++P V ++ + + ++ ++ A L +M P+ V+
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+++I G C+ G+++ DL +RMI N + +S L+ G+C+EG V + M
Sbjct: 236 YSSLISGFCVV-GKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVM 294
Query: 464 VTKKGRL 470
+ K +L
Sbjct: 295 MKKNVKL 301
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 208/455 (45%), Gaps = 52/455 (11%)
Query: 58 VTKVIYEQTNPYHALFFFNWASN-PNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
V K++ + NP+ AL F+ + P Y HT + I L L++ + +++
Sbjct: 13 VIKLLKSEKNPHSALSIFDSVTRFPG-----YSHTPYVFHHILKRLFDPKLVAHVSRIVE 67
Query: 117 ----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN-GACLYSYNSLLGVLVRV 171
K + +IKAY A+ F + +I + SYNSLL L+
Sbjct: 68 LIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIES 127
Query: 172 NSIKLAEEFFHQIVKENVVP----------------------------------PDVSTY 197
N AE FF + P PDV +Y
Sbjct: 128 NKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSY 187
Query: 198 TTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM- 253
T+I K G + +A K+FD M V P++ YN +I+GF KKG++ A + ++
Sbjct: 188 GTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLK 247
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
PN +YN MI GLC G+ DE+ + +M+ N ++ T+ +++ GLC G D
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A + + E ++PDV Y ++NG+ + G+ +E + L K M G + TV S+N +
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILI 366
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
R L EN ++D AI + + +P+ DC + ++Y ++ GLC G + +++
Sbjct: 367 RGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC-KNGYLNKALSILEEAENGRG 425
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+LD YS ++ G C EG ++ V + +M TK G
Sbjct: 426 DLDTFAYSSMINGLCREGRLDEVAGVLDQM-TKHG 459
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 169/325 (52%), Gaps = 6/325 (1%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+H+ K+ E G LY+Y++L+ L ++ A + ++ EN V PDV Y TM+ GY
Sbjct: 278 WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA-ENGVSPDVVVYNTMLNGYL 336
Query: 206 KMGMIENAKKVFDVMTVKP--NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+ G IE +++ VM + +++YN +I G + +++EA + + C + +T
Sbjct: 337 RAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMT 396
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKD-NVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
Y +++GLC NG +++A ++ + NG D + + SM+ GLC G+ D+ G L +
Sbjct: 397 YGVLVHGLCKNGYLNKALSILEEAE-NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 455
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ P+ VINGF + K ++A+ M ++G PTV ++N + L +
Sbjct: 456 TKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF 515
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
A L+K+M PN ++Y+ ++ GLC K ++ +L + + G D M++
Sbjct: 516 SEAYALVKEMLHKGWKPNMITYSLLMNGLCQGK-KLDMALNLWCQALEKGFKPDVKMHNI 574
Query: 443 LLKGYCEEGNVENVMQIAHEMVTKK 467
++ G C G VE+ +Q+ EM +K
Sbjct: 575 IIHGLCSSGKVEDALQLYSEMKQRK 599
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 126/244 (51%), Gaps = 8/244 (3%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D Y++MI G C+ G ++ V D MT KPN N +INGF + +LE+A +
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
M+++GC P +TYN +I GL R EA L+ +M G+K N+ T+ ++ GLC
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
K D A+ +E PDVK + ++I+G C GK ++A+ L EM+ R P + +
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD----VEDLV 425
N + + + +RA + + Q P+ +SYN + GLC R+ D + D V
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCH-RISDAVGFLNDAV 666
Query: 426 DRMI 429
DR +
Sbjct: 667 DRGV 670
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 120/224 (53%), Gaps = 4/224 (1%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
N+++ VR + ++ A FF +V + P V TY T+I G K A + M
Sbjct: 468 NAVINGFVRASKLEDALRFFGNMVSKGCFPT-VVTYNTLINGLSKAERFSEAYALVKEML 526
Query: 221 --TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
KPN++ Y+ ++NG C+ +L+ A + + +G +P+ +N +I+GLC +G+V+
Sbjct: 527 HKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVE 586
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A L ++M+ N+ TH ++++G V F++A ++++ PD+ SY + +
Sbjct: 587 DALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITL 646
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
G C + +A+ L + RG+ PT ++N + R +++NG L
Sbjct: 647 KGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 144/309 (46%), Gaps = 14/309 (4%)
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVF----DVMTVKPNLLAYNTMINGFCKKGELEEAK 246
P DV+ T+I+ Y K M + A +F ++ +P + +YN+++N + + +EA+
Sbjct: 77 PEDVAL--TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAE 134
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
G PN TYN +I C + D+AK L+ M GF +V ++ +++ L
Sbjct: 135 SFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSL 194
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE-MRARGLKPT 365
G A+ + E + PDV Y ++I+GF K G A + + ++ + P
Sbjct: 195 AKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPN 254
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ S+N + L + G+ D + + +M + + + +Y+T+I GLC G + +
Sbjct: 255 IPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC-GSGNLDGATRVY 313
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTR------ 479
M +G + D +Y+ +L GY G +E +++ M + R + N L R
Sbjct: 314 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENA 373
Query: 480 VVDALLLMW 488
VD + +W
Sbjct: 374 KVDEAISIW 382
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 130/284 (45%), Gaps = 6/284 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ G + A+ +A+ ++Y+S++ L R + Q+ K
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459
Query: 189 VVP-PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEE 244
P P V +I G+ + +E+A + F M K P ++ YNT+ING K E
Sbjct: 460 CKPNPHVCN--AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSE 517
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + EM+++G +PN +TY+ ++ GLC ++D A L + GFK +V H ++
Sbjct: 518 AYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIH 577
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC GK + A+ + + P++ ++ ++ GF K+ + A + + G +P
Sbjct: 578 GLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQP 637
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+ S+N + L + A+ L LP +++N ++
Sbjct: 638 DIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 190/380 (50%), Gaps = 43/380 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ + + A++ + E YN+LLG R + A + Q+V+
Sbjct: 198 STLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVR 257
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELE 243
+ P+++TY M+ G CK+GM + A V++ M +P+++ Y TMI+G C+ +++
Sbjct: 258 DPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVD 317
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + +EM+ G P+ + YN+++ G C GRV EA M ++G + NV+++ ML
Sbjct: 318 SAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIML 376
Query: 304 KGLCVVGKFDQAVGYLRNVMEAN--MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
KGL G D+A L ++E + ++PD+ ++ +I+G C+ G +++++ +L+E R G
Sbjct: 377 KGLFDGGMVDKATD-LWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSG 435
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLK------------------------------- 390
+ FS++++ L ++G LD A+ L +
Sbjct: 436 KELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAI 495
Query: 391 ----QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
QM + DC P ++YNT+I GLC A+ ++ M+ G LD Y L++G
Sbjct: 496 RVYSQMAENDCSPTTITYNTLIHGLCKAEKYLE-ASRFTREMLEKGCMLDVNTYGSLIRG 554
Query: 447 YCEEGNVENVMQIAHEMVTK 466
C + ++ + + ++++ K
Sbjct: 555 LCRDKKIDGALALWNQILDK 574
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 135/244 (55%), Gaps = 5/244 (2%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCM 249
D +Y++MI G CK G +++A K+++ +++ KPN YN +INGFC+ + +A +
Sbjct: 439 DEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVY 498
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++M C P +TYN +I+GLC + EA +M G +V+T+ S+++GLC
Sbjct: 499 SQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRD 558
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG-LKPTVFS 368
K D A+ +++ + DV + ++I+G C GK DEA LL EM+ + P V +
Sbjct: 559 KKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVT 618
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + E G D+A L + + +P+ +SYNT I GLC + V+ L++ M
Sbjct: 619 YNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQ-LLNEM 677
Query: 429 IRSG 432
+ SG
Sbjct: 678 LASG 681
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 165/342 (48%), Gaps = 8/342 (2%)
Query: 129 LIKAYGDRGNVKAAIFW-FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
L+K + G V A W F + + + SYN +L L + A + + + K+
Sbjct: 341 LLKGFCHAGRVGEA--WKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKD 398
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEE 244
+ + PD+ T++TMI G C+ G + ++ + L +Y++MI+G CK G L++
Sbjct: 399 DSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDD 458
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A K ++ +PN YNA+I G C + +A + ++M N T+ +++
Sbjct: 459 AVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIH 518
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC K+ +A + R ++E DV +Y +I G C+ K D A++L ++ +GL+
Sbjct: 519 GLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQT 578
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMD-CLPNFVSYNTIICGLCMAKGRMQDVED 423
V N + L G++D A LL +M + + C PN V+YNT++ G G
Sbjct: 579 DVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGF-YETGCFDKAAS 637
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
L ++ +G D Y+ +KG C +Q+ +EM+
Sbjct: 638 LWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLA 679
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 158/333 (47%), Gaps = 41/333 (12%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +Y +++ L R + A + +++K +VP DV Y ++++G+C G + A K +
Sbjct: 300 MITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVP-DVVIYNSLLKGFCHAGRVGEAWKFW 358
Query: 218 DVMTVK--------------------------------------PNLLAYNTMINGFCKK 239
D M+V P+++ ++TMI+G C+K
Sbjct: 359 DSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEK 418
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ + + E G +E +Y++MI GLC +GR+D+A L K+ ++ FK N +
Sbjct: 419 GFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIY 478
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C KF A+ + E + +P +Y +I+G CK K EA +EM
Sbjct: 479 NALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLE 538
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G V ++ ++ R L + ++D A+ L Q+ + V +N +I GLC A G++
Sbjct: 539 KGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSA-GKVD 597
Query: 420 DVEDLVDRMIRSGHNL-DFTMYSCLLKGYCEEG 451
+ L+ M + + Y+ L+ G+ E G
Sbjct: 598 EASQLLSEMKEKNNCCPNVVTYNTLMDGFYETG 630
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 164/342 (47%), Gaps = 43/342 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENV---VPPDVSTYTTMIRGYCKMGMIENAKKV 216
S+N+LL VR A+ FF + + P++ TY M+R C G ++ A +
Sbjct: 122 SHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTL 181
Query: 217 FDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
FD + + P+ + Y+T+++GF K L+ A ++EM + +P+ + YNA++ G
Sbjct: 182 FDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFR 241
Query: 274 NGRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
NG ++A + ++ R G N++T+ ML GLC +G F +A ++ N PD+
Sbjct: 242 NGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMI 301
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF------------------------- 367
+Y +I+G C+ D A + EM GL P V
Sbjct: 302 TYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSM 361
Query: 368 ---------SFNAVFRILVENGELDRAILLLKQMPQMDCL-PNFVSYNTIICGLCMAKGR 417
S+N + + L + G +D+A L + + + D L P+ V+++T+I GLC KG
Sbjct: 362 SVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLC-EKGF 420
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+++ SG LD YS ++ G C++G +++ +++
Sbjct: 421 ANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKL 462
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 147/301 (48%), Gaps = 7/301 (2%)
Query: 114 LLKNSNKLSDFFI--SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
LL+ + LS + S +I ++G ++ +A+ +SY+S++ L +
Sbjct: 394 LLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKD 453
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
+ A + + +I ++ P+ Y +I G+C+ +A +V+ M P +
Sbjct: 454 GRLDDAVKLYEKISMDSF-KPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTIT 512
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT+I+G CK + EA + EM+ +GC + TY ++I GLC + ++D A L ++
Sbjct: 513 YNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQIL 572
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN-MNPDVKSYEVVINGFCKIGKS 347
G + +V H ++ GLC GK D+A L + E N P+V +Y +++GF + G
Sbjct: 573 DKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCF 632
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
D+A SL + GL P + S+N + L + LL +M +P +++N +
Sbjct: 633 DKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNIL 692
Query: 408 I 408
+
Sbjct: 693 V 693
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 133/270 (49%), Gaps = 5/270 (1%)
Query: 117 NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKL 176
+ +L +F S +I G + A+ + + + YN+L+ + +
Sbjct: 434 SGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSD 493
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMI 233
A + Q+ EN P TY T+I G CK A + M K +L Y ++I
Sbjct: 494 AIRVYSQMA-ENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLI 552
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR-LNGF 292
G C+ +++ A N+++++G + + + +N +I+GLC G+VDEA L+++M+ N
Sbjct: 553 RGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNC 612
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
NV T+ +++ G G FD+A ++E + PD+ SY I G C ++ E +
Sbjct: 613 CPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQ 672
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGEL 382
LL EM A G+ PT ++N + R +++ G +
Sbjct: 673 LLNEMLASGIIPTAITWNILVRAVIKYGPI 702
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 141/287 (49%), Gaps = 11/287 (3%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT-------VKPNLLAYNTMINGFCKKGELEE 244
P V ++ ++ + + +A F ++ + PNL YN M+ C +G+L+
Sbjct: 118 PGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDR 177
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + + RG P+ +TY+ ++ G N R+D A L+ +M + + + ++L
Sbjct: 178 AVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLG 237
Query: 305 GLCVVGKFDQAVGYLRN-VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G G+F++A+ V + +P++ +Y V+++G CK+G EA + + M A +
Sbjct: 238 GCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQ 297
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + ++ + L + ++D A + +M + +P+ V YN+++ G C A GR+ +
Sbjct: 298 PDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHA-GRVGEAWK 356
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
D M SG + T Y+ +LKG + G V+ + E++ K L
Sbjct: 357 FWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDL-WELLEKDDSL 401
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 6/180 (3%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA----NMNPDVKSYEVVINGFCKIGK 346
G V +H ++L +F A + ++ + P++++Y +++ C G
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
D A++L +R RGL P +++ + V+N LD A+ LL +MP + P+ V YN
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRS-GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
++ G C G + + ++++R G + + Y+ +L G C+ G + + MV
Sbjct: 235 LLGG-CFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVA 293
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 175/311 (56%), Gaps = 7/311 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++N L+ L + ++ A+ ++ K + V P TY +I GYCK G++ A +++
Sbjct: 274 TFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSP--YTYNPLICGYCKKGLLVEALALWE 331
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M V P + ++NT++ GFCK+G++ +A++ +++M+ + P+ ++YN +IYG C G
Sbjct: 332 EMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLG 391
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ EA +L+ ++R N+ T+ +++ GLC +G + A+ +++ ++PDV +Y
Sbjct: 392 NIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYT 451
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
V++NG CK+G A EM GL P F++ A ++ G+ +A L ++M
Sbjct: 452 VLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTK 511
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ ++YN + GLC G +++ +L+ +MIR GH D Y+ + + E G++
Sbjct: 512 GFPPDVITYNVFVNGLCKL-GNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLRE 570
Query: 456 VMQIAHEMVTK 466
+I ++M+++
Sbjct: 571 GREIFYDMLSR 581
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 160/308 (51%), Gaps = 5/308 (1%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N +L +L N + A E + +++ E + P V+TY TM+ +CK G ++ A + M
Sbjct: 206 NRILKILRDKNLLVKALEVY-RMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQ 264
Query: 222 VK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ P+ + +N +ING KKGEL++AK + EM G R + TYN +I G C G +
Sbjct: 265 ERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLV 324
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EA L +M G V++H +++ G C GK A L ++++ N+ PD+ SY +I
Sbjct: 325 EALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLI 384
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
GFC++G EA LL E+R R L + ++N + L G+L+ A+ L + M
Sbjct: 385 YGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIH 444
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P+ V+Y ++ G C G M ++ D M+ G D Y+ + G + G+ +
Sbjct: 445 PDVVTYTVLVNGACKL-GNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFK 503
Query: 459 IAHEMVTK 466
+ EM+TK
Sbjct: 504 LQEEMLTK 511
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 152/313 (48%), Gaps = 5/313 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN+L+ R+ +I A ++ N+ ++ TY T+I G C++G +E A K+ +
Sbjct: 379 SYNTLIYGFCRLGNIGEAFILLDELRFRNL-SFNIVTYNTLIDGLCRLGDLETALKLKED 437
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+++ Y ++NG CK G + AK+ +EM++ G P++ Y A I G G
Sbjct: 438 MINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGD 497
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+A L +M GF +V T+ + GLC +G ++A L+ ++ PD +Y
Sbjct: 498 TAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTS 557
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ + G E + +M +RG PTV ++ + NG LD A+ +M +
Sbjct: 558 FMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKG 617
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+PN ++YN +I G C + +M M G + Y+ L+ C G +
Sbjct: 618 VVPNVITYNVLINGFCKVR-KMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEA 676
Query: 457 MQIAHEMVTKKGR 469
+++ +M+ K+ R
Sbjct: 677 LRLYAQMLGKRIR 689
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 143/318 (44%), Gaps = 39/318 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + GN+ A + + + +YN+L+ L R+ ++ A + ++
Sbjct: 383 LIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRG 442
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM------------------------TVK- 223
+ PDV TYT ++ G CK+G + AK+ FD M T K
Sbjct: 443 -IHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKA 501
Query: 224 -------------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
P+++ YN +NG CK G LEEA + + +M+ G P+ +TY + ++
Sbjct: 502 FKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHA 561
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
NG + E + + M G V T+ ++ + G+ D A+ Y + E + P+
Sbjct: 562 HMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPN 621
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V +Y V+INGFCK+ K D+A EM+ +G+ P +++ + G+ A+ L
Sbjct: 622 VITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYA 681
Query: 391 QMPQMDCLPNFVSYNTII 408
QM P+ ++ ++
Sbjct: 682 QMLGKRIRPDSCTHGALL 699
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 121/243 (49%), Gaps = 1/243 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P++ N ++ K L +A + M G RP TYN M++ C G V A L
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL 259
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ KM+ G + T ++ GL G+ QA G ++ + +A + +Y +I G+CK
Sbjct: 260 VPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCK 319
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G EA++L +EM RG+ PTV S N + + G++ A L M + + +P+ +S
Sbjct: 320 KGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIIS 379
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YNT+I G C G + + L+D + + + Y+ L+ G C G++E +++ +M
Sbjct: 380 YNTLIYGFCRL-GNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDM 438
Query: 464 VTK 466
+ +
Sbjct: 439 INR 441
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 99/189 (52%), Gaps = 3/189 (1%)
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKK 247
PPDV TY + G CK+G +E A ++ M P+ + Y + ++ + G L E ++
Sbjct: 514 PPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGRE 573
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+M++RG P +TY +I+ +NGR+D A +M+ G NV T+ ++ G C
Sbjct: 574 IFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFC 633
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
V K DQA + + E + P+ +Y ++IN C +GK EA+ L +M + ++P
Sbjct: 634 KVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSC 693
Query: 368 SFNAVFRIL 376
+ A+ + L
Sbjct: 694 THGALLKKL 702
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
++ KM N F +V +LK L +A+ R + E + P V +Y +++ F
Sbjct: 188 LVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSF 247
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK G+ A+ L+ +M+ RG P+ +FN + L + GEL +A L+++M + +
Sbjct: 248 CKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSP 307
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
+YN +ICG C KG + + L + M+ G + ++ ++ G+C+EG + + Q
Sbjct: 308 YTYNPLICGYC-KKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLS 366
Query: 462 EMVTK 466
+M+ K
Sbjct: 367 DMLKK 371
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 202/414 (48%), Gaps = 15/414 (3%)
Query: 61 VIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLS----HSLISIAASLLK 116
+I + +P HAL FN S N + H Y I D L H++ + +
Sbjct: 99 LIKREKDPQHALNIFNMVS----EQNGFQHNNATYATILDKLARCNNFHAVDRVLHQMTY 154
Query: 117 NSNKLSDFFISKLIKAYGDRG-NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK 175
+ K + L+K + + K +F + + ++ L +L+ N +
Sbjct: 155 ETCKFHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLDSNRVD 214
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT----VKPNLLAYNT 231
LA + ++ P+V + +++ +CK G +++A ++ + M PNL+ Y+T
Sbjct: 215 LARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYST 274
Query: 232 MINGFCKKGELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+++G C+ G ++EA EM++R P+ LTYN +I G C G+ D A+ ++ M+ N
Sbjct: 275 LMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSN 334
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G NV + +++ GLC VGK + A G L + + + PD +Y +IN C+ GKSDEA
Sbjct: 335 GCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEA 394
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
I LL+EM+ G + +FN + L G+ + A+ +++++PQ N SY ++
Sbjct: 395 IELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNS 454
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L K ++ ++L+ M+R G + + LL C+ G V++ ++V
Sbjct: 455 L-TQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLV 507
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 181/356 (50%), Gaps = 5/356 (1%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+L KLS + L+ + G + A+ H+ + I L +Y+ L+ L + +
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGA 460
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYN 230
++ A E + ++ + + P + +I G + G I A+ FD +T V ++ YN
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVC-SAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYN 519
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
MI+G+ K G + EA + +++ +G P +T+N++IYG C G++ EA L+ ++++
Sbjct: 520 IMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVH 579
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G T+ +++ G C G L + + P +Y VV+ G CK G+ E+
Sbjct: 580 GLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHES 639
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+ LLK M ARGL P ++N V + + +L +A L QM Q P+ V+YN +I G
Sbjct: 640 VQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLING 699
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC+ G ++D + L+ + L Y+ ++K +C +G+V+N + H+MV +
Sbjct: 700 LCV-YGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVER 754
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 182/376 (48%), Gaps = 40/376 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + ++ A+ + + E G + S+N+L+ ++ S+ +A+ FF ++K
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
++P DV +Y ++ G C G +E A + + M V+P+++ YN + NGF G + A
Sbjct: 301 LLP-DVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + M+ G P+ +TY +I G C G ++E+ L KM G K ++ T+ +L
Sbjct: 360 WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSS 419
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ D+AV L + + PD+ +Y V+I+G CK G +EAI L +EM ++ + P
Sbjct: 420 LCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPN 479
Query: 366 VFSFNAVFRILVENGELDRAILLL-----------------------------------K 390
F +A+ L E G + A + K
Sbjct: 480 SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 539
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
Q+ + P V++N++I G C KG++ + L+D + G Y+ L+ GYCEE
Sbjct: 540 QIIEKGISPTIVTFNSLIYGFC-KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEE 598
Query: 451 GNVENVMQIAHEMVTK 466
G++ ++ + HEM K
Sbjct: 599 GDMHSMFDMLHEMEAK 614
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 177/338 (52%), Gaps = 9/338 (2%)
Query: 132 AYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP 191
AY V A+F + K + + +YNSLL + + + +++I K + VP
Sbjct: 177 AYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLL---YNLRHTDIMWDVYNEI-KASGVP 232
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKC 248
+ T +I G C+ +++A P+++++N +++GFCK G ++ AK
Sbjct: 233 QNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSF 292
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M+ G P+ +YN +++GLC+ G ++EA M +G + ++ T+ + G +
Sbjct: 293 FCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRI 352
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+G A ++ ++ +NPD+ +Y ++I G C++G +E+ L ++M ++GLK ++ +
Sbjct: 353 LGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVT 412
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ + L ++G +D A++LL +M + P+ ++Y+ +I GLC +G +++ +L + M
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLC-KRGAVEEAIELYEEM 471
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + S ++ G E+G + Q+ + VTK
Sbjct: 472 CSKRIYPNSFVCSAIISGLFEKGAISEA-QMYFDSVTK 508
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 94/189 (49%), Gaps = 4/189 (2%)
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMING 235
+ H++ + + P + TYT +++G CK G + + ++ M + P+ + YNT+I
Sbjct: 606 DMLHEMEAKAIKPTQI-TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQS 664
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
FCK +L++A + N+M+ +P+ +TYN +I GLC+ G + +A L+ ++ +
Sbjct: 665 FCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLT 724
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
+ +++K C G A+ + ++E ++ Y VIN CK +A
Sbjct: 725 KVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFC 784
Query: 356 EMRARGLKP 364
M G+ P
Sbjct: 785 MMLTHGIPP 793
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKC 248
PD TY T+I+ +CK ++ A ++ + M +++P+ + YN +ING C G L++A +
Sbjct: 653 PDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRL 712
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ + ++ R ++ Y +I C G V A + +M GF+ ++ + +++ LC
Sbjct: 713 LVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCK 772
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
A + ++ + PD V++N F + G + + M GL P
Sbjct: 773 RNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 113 SLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+L S +L+ + +IKA+ +G+V+ A+ +FHQ + + Y++++ L + N
Sbjct: 715 TLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRN 774
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL 227
I A+ FF ++ +PPD M+ + + G + ++F M +K LL
Sbjct: 775 LITDAKFFFCMMLTHG-IPPDQDICLVMLNAFHRSGDPNSVFEIF-AMMIKCGLL 827
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 162/318 (50%), Gaps = 16/318 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
+Y SL+ L NS A E F + + PP TY MI CK GM+E A KK
Sbjct: 360 AYTSLIHGLCMANSFDDARELFADMNRRGC-PPSPVTYNVMIDASCKRGMLEEACDLIKK 418
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN- 274
+ + V P+++ YNT+++G CK +EEA NEM GC PN ++N +I GLC
Sbjct: 419 MIEDGHV-PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQS 477
Query: 275 --------GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
G++DEA L+ +M +G +V T+ +++ GLC + + D A L ++++
Sbjct: 478 KIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 537
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
P V + +I+G CK G+ EA +L M + G P V ++N + G+ +RA
Sbjct: 538 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 597
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
LL M PN V+Y ++ GLC A R+ + + +M SG + Y+ L+ G
Sbjct: 598 ELLSDMVARGLAPNVVTYTALVSGLCKAN-RLPEACGVFAQMKSSGCAPNLFTYTALILG 656
Query: 447 YCEEGNVENVMQIAHEMV 464
+C G V+ +++ EMV
Sbjct: 657 FCSAGQVDGGLKLFGEMV 674
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 168/321 (52%), Gaps = 14/321 (4%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L YN ++ L + + I A + F ++ + NV PD +Y +I G K G + +A+ +F
Sbjct: 288 LRGYNIVILGLCQNDRIDEAVQMFEKMNERNV-SPDSWSYGILIDGLAKAGKLNDARNLF 346
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ V P+ +AY ++I+G C ++A++ +M RGC P+ +TYN MI C
Sbjct: 347 QKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKR 406
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G ++EA L+ KM +G +V T+ +++ GLC + ++A+ + P+ +S+
Sbjct: 407 GMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSH 466
Query: 335 EVVINGFCKI---------GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+I G C+ GK DEA LLK M G P V +++ + L +D A
Sbjct: 467 NTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 526
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
LL+ M + C P V+ NT+I GLC A GR+++ +++D M+ SG + D Y+ L+
Sbjct: 527 RHLLEDMVKRQCKPTVVTQNTLIHGLCKA-GRIKEAREVLDAMVSSGQSPDVVTYNTLVH 585
Query: 446 GYCEEGNVENVMQIAHEMVTK 466
G+C G E ++ +MV +
Sbjct: 586 GHCRAGQTERARELLSDMVAR 606
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 162/315 (51%), Gaps = 14/315 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ + ++ A + +++++ VP DV TY T++ G CK +E A +F+
Sbjct: 395 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVP-DVVTYNTVMDGLCKSSRVEEALLLFNE 453
Query: 220 MT---VKPNLLAYNTMINGFCK---------KGELEEAKKCMNEMMNRGCRPNELTYNAM 267
M PN ++NT+I G C+ +G+L+EA + + M + G P+ +TY+ +
Sbjct: 454 MERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 513
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC RVD+A+ L+ M K V T +++ GLC G+ +A L ++ +
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+PDV +Y +++G C+ G+++ A LL +M ARGL P V ++ A+ L + L A
Sbjct: 574 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 633
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+ QM C PN +Y +I G C A G++ L M+ +G + D +Y L
Sbjct: 634 VFAQMKSSGCAPNLFTYTALILGFCSA-GQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 692
Query: 448 CEEGNVENVMQIAHE 462
C+ G ++I E
Sbjct: 693 CKSGRSARALEILRE 707
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 168/350 (48%), Gaps = 21/350 (6%)
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
D G + A+ + + ++ CL + N LL + A E + E P +V
Sbjct: 192 DSGRIDEALQVYRENRR---EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEV 248
Query: 195 STYTTMIRGYCKMGMIENAKKVFD---------VMTVKPNLLAYNTMINGFCKKGELEEA 245
S Y T++ G CK G +E A ++F + P+L YN +I G C+ ++EA
Sbjct: 249 S-YCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEA 307
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M R P+ +Y +I GL G++++A+ L K+ +G + + S++ G
Sbjct: 308 VQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHG 367
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC+ FD A ++ P +Y V+I+ CK G +EA L+K+M G P
Sbjct: 368 LCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPD 427
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM--------AKGR 417
V ++N V L ++ ++ A+LL +M ++ C PN S+NTII GLC +G+
Sbjct: 428 VVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGK 487
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ + L+ RM GH D YS L+ G C V++ + +MV ++
Sbjct: 488 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 537
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 181/383 (47%), Gaps = 43/383 (11%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
N V + + + AL FN PN+ H T I L S I A
Sbjct: 432 NTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT-----IILGLCQQSKIDQAC--- 483
Query: 116 KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK 175
KL + F +L+K D G+V + +Y++L+ L + +
Sbjct: 484 -QRGKLDEAF--RLLKRMTDDGHVPDVV----------------TYSTLISGLCSIARVD 524
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTM 232
A +VK P V T T+I G CK G I+ A++V D M P+++ YNT+
Sbjct: 525 DARHLLEDMVKRQC-KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 583
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
++G C+ G+ E A++ +++M+ RG PN +TY A++ GLC R+ EA + A+M+ +G
Sbjct: 584 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 643
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
N+ T+ +++ G C G+ D + ++ A ++PD Y + CK G+S A+
Sbjct: 644 APNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALE 703
Query: 353 LLKEMRARGLKPTVFSFNAVFRI----LVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+L+E R L+ + + V+R L+E G+++ A+ ++ M + LP +++
Sbjct: 704 ILREGR-ESLRSEAWG-DEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLV 761
Query: 409 CGLCM------AKGRMQDVEDLV 425
GLC A+ ++++ DL
Sbjct: 762 AGLCKSGQGGEARAVLEEIMDLA 784
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 138/265 (52%), Gaps = 10/265 (3%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTV--KPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+T++I+G+C +G A K+F +M P YN +I+ K+ E E KK + M++
Sbjct: 13 FTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVD 72
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
RGC P+ T+ ++ GLC G++DEA+++M +MR +T + LC+ G ++
Sbjct: 73 RGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMER 132
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A L + AN + +Y +V+ CK + D+A+ L + M + + S ++V
Sbjct: 133 AFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLV 188
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L+++G +D A+ + ++ + CL V+ N ++ G C ++G++ +L+ M
Sbjct: 189 GLMDSGRIDEALQVYRENRREPCL---VTLNVLLEGFC-SRGQVDKARELLRAMPDEECA 244
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQI 459
D Y +L G C+ G VE +++
Sbjct: 245 PDEVSYCTVLDGLCKAGRVEEAVRL 269
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 151/343 (44%), Gaps = 45/343 (13%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN L+ L + + ++ +V P D T+TT++ G CK G ++ A+ V D M
Sbjct: 47 YNVLIDSLSKRQETEAVKKMVQVMVDRGCFP-DSFTFTTILCGLCKAGKMDEAELVMDEM 105
Query: 221 TVK----------------------------------PNLLAYNTMINGFCKKGELEEAK 246
+ N AYN ++ CK +++A
Sbjct: 106 RSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDAL 165
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ M + + ++++ GL +GR+DEA + R N + + T +L+G
Sbjct: 166 ELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEA---LQVYRENRREPCLVTLNVLLEGF 222
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR------AR 360
C G+ D+A LR + + PD SY V++G CK G+ +EA+ L + +
Sbjct: 223 CSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSS 282
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
P++ +N V L +N +D A+ + ++M + + P+ SY +I GL A G++ D
Sbjct: 283 SSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKA-GKLND 341
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+L +++ SG Y+ L+ G C + ++ ++ +M
Sbjct: 342 ARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 384
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR---------LNGFKDNVSTHKSM 302
M +G P L + ++I G C GR EA + + M N D++S +
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60
Query: 303 LKGLCVVGKFDQAVGYLRNVM-EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+AV + VM + PD ++ ++ G CK GK DEA ++ EMR+R
Sbjct: 61 -----------EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRM 109
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P + + + L G ++RA LL+ MP + N +YN ++ LC A R+ D
Sbjct: 110 IPPYFATSSFLAHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALCKA-ARVDDA 164
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+L M L +L G + G ++ +Q+ E
Sbjct: 165 LELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRE 205
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 179/348 (51%), Gaps = 40/348 (11%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
+ +Y++N ++ VL + +K A EF ++ P+V +Y T+I GY G IE A++
Sbjct: 247 STVYTFNIMVNVLCKEGKLKKAREFI-GFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARR 305
Query: 216 VFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ D M VK P+ Y ++I+G CK+G LEEA ++M+ G PN +TYN +I G C
Sbjct: 306 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 365
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G ++ A +M G +VST+ ++ L + G+ +A ++ + + + PD
Sbjct: 366 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 425
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPT--------------------------- 365
+Y ++ING+ + G + +A L EM ++G++PT
Sbjct: 426 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 485
Query: 366 --------VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
V FNA+ NG ++RA +LLK+M + P+ V++NT++ G C +G+
Sbjct: 486 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC-REGK 544
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+++ L+D M R G D Y+ L+ GY G++++ ++ EM++
Sbjct: 545 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 592
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 165/308 (53%), Gaps = 5/308 (1%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N +L + +++N +++A + ++ + + V T+ M+ CK G ++ A++ M
Sbjct: 218 NDMLSLFLKLNRMEMAWVLYAEMFRLRI-SSTVYTFNIMVNVLCKEGKLKKAREFIGFME 276
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
KPN+++YNT+I+G+ +G +E A++ ++ M +G P+ TY ++I G+C GR++
Sbjct: 277 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 336
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EA L KM G N T+ +++ G C G ++A Y +++ + P V +Y +++
Sbjct: 337 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 396
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
+ G+ EA ++KEMR +G+ P ++N + G +A L +M
Sbjct: 397 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIE 456
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P V+Y ++I L + RM++ +DL ++++ G + D M++ ++ G+C GNVE
Sbjct: 457 PTHVTYTSLIYVLS-RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFM 515
Query: 459 IAHEMVTK 466
+ EM K
Sbjct: 516 LLKEMDRK 523
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 171/346 (49%), Gaps = 15/346 (4%)
Query: 129 LIKAYGDRGNVKAA--IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+I Y RGN++ A I + K IE + Y+Y SL+ + + ++ A F ++V+
Sbjct: 290 IIHGYSSRGNIEGARRILDAMRVKGIEPDS--YTYGSLISGMCKEGRLEEASGLFDKMVE 347
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+VP V TY T+I GYC G +E A D M K P++ YN +++ +G +
Sbjct: 348 IGLVPNAV-TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 406
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + EM +G P+ +TYN +I G G +A L +M G + T+ S++
Sbjct: 407 EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLI 466
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
L + +A +++ ++PDV + +++G C G + A LLKEM + +
Sbjct: 467 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP 526
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +FN + + G+++ A +LL +M + P+ +SYNT+I G GR D++D
Sbjct: 527 PDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY----GRRGDIKD 582
Query: 424 ---LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ D M+ G N Y+ L+K C+ + ++ EMV K
Sbjct: 583 AFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 628
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 183/435 (42%), Gaps = 73/435 (16%)
Query: 75 FNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN-SNKLSDFFISKLIKAY 133
F+++ N N N +TP IT+ ++S S++S ++ S L+ IS ++
Sbjct: 49 FHFSFNRNFNSLASSESTP---PITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNL 105
Query: 134 GDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV--LVRVNSIKLAEEFFHQIVKENVVP 191
+ + + F H CL + + L V L R+ S KLA + Q++
Sbjct: 106 CSKPQL-VSDFIHHLHPH-----CLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTR--- 156
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLA------YNTMINGFCKKGELEEA 245
I +++FD +T+ + L+ ++ ++ C+ +EA
Sbjct: 157 ------------------IATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEA 198
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
KC M +G P T N M+ R++ A +L A+M V T M+
Sbjct: 199 FKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNV 258
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC GK +A ++ + P+V SY +I+G+ G + A +L MR +G++P
Sbjct: 259 LCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPD 318
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC------------- 412
+++ ++ + + G L+ A L +M ++ +PN V+YNT+I G C
Sbjct: 319 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 378
Query: 413 ---------------------MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+GRM + +D++ M + G D Y+ L+ GY G
Sbjct: 379 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 438
Query: 452 NVENVMQIAHEMVTK 466
N + + +EM++K
Sbjct: 439 NAKKAFDLHNEMLSK 453
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 192/388 (49%), Gaps = 25/388 (6%)
Query: 86 NKYHHTTPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKA 141
N + T Y+ + L + S + A L +K + + D + + LI + G +K
Sbjct: 483 NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQ 542
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A W + + + +Y +L+ ++ + +A E F ++ + P +V TYT +I
Sbjct: 543 AHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP-NVITYTALI 601
Query: 202 RGYCKMGMIENAKKVFDVM-------------------TVKPNLLAYNTMINGFCKKGEL 242
GYCK G IE A +++ M KPN++ Y +++G CK ++
Sbjct: 602 DGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKV 661
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A+ + M GC PN + Y+A+I G C ++DEA+ + KM +G+ NV T+ S+
Sbjct: 662 KDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSL 721
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ L + D + L ++E + P++ Y +I+G K+ K+DEA L+ M +G
Sbjct: 722 IDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGC 781
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KP V ++ A+ + G++D+ + L ++M C PNFV+Y T++ C A G + +
Sbjct: 782 KPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY-TVLINHCCATGHLDEAY 840
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
L++ M ++ + Y +++GY E
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKRE 868
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 158/360 (43%), Gaps = 71/360 (19%)
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--- 221
LG R+ S+ +AE + P + + +++ YCK A K+ M
Sbjct: 359 LGRCKRILSMMIAEGCY----------PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCE 408
Query: 222 VKPNLLAYNTMINGFCKKGEL------EEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
KP + YN +I C GEL E A+K NEM++ G N++ + LC G
Sbjct: 409 CKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFG 468
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ ++A ++ +M NGF + ST+ ++ LC + + A + + + PDV +Y
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF----------------NAVFRILV-- 377
++I+ F K G +A + L EM G +PTV ++ N +F +++
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588
Query: 378 -----------------ENGELDRAILLLKQM------PQMDCL----------PNFVSY 404
++G +++A + +M P +D PN V+Y
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
++ GLC A +++D DL++ M G + +Y L+ G+C+ ++ ++ H+MV
Sbjct: 649 GALVDGLCKAH-KVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 180/468 (38%), Gaps = 55/468 (11%)
Query: 46 LDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSH 105
L QF L ++V +++ +P + FF WA Y HT Y A+ DV
Sbjct: 129 LRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQI----GYDHTPAVYIALLDVFERG 184
Query: 106 SLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSY 161
S + L+ + ++ ++ LI+ G A+ + K +Y
Sbjct: 185 SYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTY 244
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N+L+ V +R + + A+ H+ + E + D T + CK+G A + +
Sbjct: 245 NALVQVFLRADKLDTAQ-LVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKED 303
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR-VDEA 280
PN + YN MI+G C+ EEA +N M + C PN TY ++ G C+N + +
Sbjct: 304 FVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCG-CLNKKQLGRC 362
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
K +++ M G + + S++ C F A L+ + + P Y ++I
Sbjct: 363 KRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGS 422
Query: 341 FCK-----------------------------------------IGKSDEAISLLKEMRA 359
C GK ++A ++ EM
Sbjct: 423 ICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMG 482
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-GRM 418
G P +++ V L ++ A L K+M +P+ +Y +I C +K G +
Sbjct: 483 NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILI--DCFSKAGII 540
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + +D M+R G Y+ L+ Y + V ++ M+ K
Sbjct: 541 KQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 173/373 (46%), Gaps = 36/373 (9%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----NSNKLSDFFISKL 129
+F +N PN Y A+ D L + A LL+ + + + L
Sbjct: 632 YFKIKNNVAEKPN-----VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDAL 686
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
I + + A FH K +E+G +Y+Y+SL+ L + + L + +++ E
Sbjct: 687 IDGFCKAAKLDEAQEVFH--KMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKML-E 743
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEE 244
N P++ YT MI G K+ + A K+ +M KPN++ Y MI+GF K G++++
Sbjct: 744 NSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDK 803
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ EM ++GC PN +TY +I C G +DEA L+ +M+ + +VS++ +++
Sbjct: 804 CLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIE 863
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK- 363
G +F ++G L V + P + Y+V+I+ F K G+ + A+ L KE+ + +
Sbjct: 864 GY--KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSM 921
Query: 364 --------PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
++SF+ +I A L M + +P+ ++ ++ GL +
Sbjct: 922 AAKKNLYTSLIYSFSYASKI-------GHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVR 974
Query: 416 GRMQDVEDLVDRM 428
R ++ L D +
Sbjct: 975 -RWEEALQLSDSL 986
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 233/474 (49%), Gaps = 39/474 (8%)
Query: 17 QSILVTSITSVIQRLN--PQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFF 74
+S ++T+I+ I+ + P + S KNI L F ++V + Y P L F
Sbjct: 42 ESPILTTISEAIKNIETKPLHISLKNI----LPSFKAHHFISLVNQNPY-FLPPKSLLSF 96
Query: 75 FNW-ASNPNPNPNKYHHTTPCYTAITDVLLSH--------------------SLISIAAS 113
F++ +S P + HT Y ++ L++H S S+ AS
Sbjct: 97 FDFLSSYPT-----FSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFAS 151
Query: 114 LLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+L+ LS F+ L+ Y + G V AI F K+ LL +++++
Sbjct: 152 ILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMS 211
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAY 229
S +A EF+ +I+ ++ PP+V T+ ++ CK G +++A+ +FD + ++P +++
Sbjct: 212 SPMVALEFYLEIL-DSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSF 270
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
NT+ING+CK G LEE + M P+ TY+A+I GLC ++++A L +M
Sbjct: 271 NTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCD 330
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G N T +++ G C G+ D A+ + + + D+ Y +I+G CK G E
Sbjct: 331 RGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFRE 390
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A + EM RGL P F++ + + G+L+ A+ + K+M + + V++ II
Sbjct: 391 ARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIIS 450
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC G++ D E + M+R+G D Y+ ++ G+C++G+V+ ++ EM
Sbjct: 451 GLC-RDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEM 503
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 171/320 (53%), Gaps = 10/320 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y GN++ ++ +++Y++L+ L + ++ A F ++
Sbjct: 273 LINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRG 332
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+VP DV T+TT+I G CK G ++ A +++ M +K +L+ YNT+I+G CK G EA
Sbjct: 333 LVPNDV-TFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREA 391
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK-DNVSTHKSMLK 304
+K + EM RG P++ TY ++ G C G ++ A + +M G + DNV+ +++
Sbjct: 392 RKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVA-FTAIIS 450
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC GK A LR ++ A + PD +Y +V++GFCK G LLKEM++ G P
Sbjct: 451 GLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIP 510
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
V ++N + L + G++ A +LL M + +P+ ++YN ++ G C G++ D +++
Sbjct: 511 GVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHC-KHGKLGDFQNV 569
Query: 425 VDRMIRSGHNLDFTMYSCLL 444
M G D+ Y LL
Sbjct: 570 KTEM---GLVSDYASYRSLL 586
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 149/307 (48%), Gaps = 8/307 (2%)
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV 222
SLL +V A F I++ + ++ Y + G + +A + F +T
Sbjct: 131 SLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFR-LTK 189
Query: 223 KPNL-LAYN---TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
K NL + +N ++ K A + E+++ G PN T+N ++ LC G+V
Sbjct: 190 KHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVK 249
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPDVKSYEVV 337
+A+++ ++R G + + +++ G C G ++ L+ VME + PDV +Y +
Sbjct: 250 DAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGF-RLKMVMEEFRVFPDVFTYSAL 308
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G CK + ++A L KEM RGL P +F + +NG +D A+ + +QM
Sbjct: 309 IDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGL 368
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ V YNT+I GLC G ++ V M + G D Y+ LL G C+EG++E +
Sbjct: 369 KADLVLYNTLIDGLCKG-GYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELAL 427
Query: 458 QIAHEMV 464
++ EMV
Sbjct: 428 EMRKEMV 434
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+G+ NV T ++ LC GK A + + + P S+ +ING+CK G +E
Sbjct: 226 SGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEE 285
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
L M + P VF+++A+ L + +L+ A L K+M +PN V++ T+I
Sbjct: 286 GFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLIN 345
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
G C GR+ ++ +M G D +Y+ L+ G C+ G + EM TK+G
Sbjct: 346 GQC-KNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEM-TKRG 402
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+L+ K D + ++ + +G+VK + + + + +YN L+ L +
Sbjct: 468 MLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQ 527
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMI 233
+K A+ + ++ VVP D+ TY +++G+CK G + + + V M + + +Y +++
Sbjct: 528 VKNADMLLNAMLNLGVVPDDI-TYNILLQGHCKHGKLGDFQNVKTEMGLVSDYASYRSLL 586
Query: 234 NGFCK 238
+ K
Sbjct: 587 HELSK 591
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 179/348 (51%), Gaps = 40/348 (11%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
+ +Y++N ++ VL + +K A EF ++ P+V +Y T+I GY G IE A++
Sbjct: 225 STVYTFNIMVNVLCKEGKLKKAREFI-GFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARR 283
Query: 216 VFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ D M VK P+ Y ++I+G CK+G LEEA ++M+ G PN +TYN +I G C
Sbjct: 284 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 343
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G ++ A +M G +VST+ ++ L + G+ +A ++ + + + PD
Sbjct: 344 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 403
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPT--------------------------- 365
+Y ++ING+ + G + +A L EM ++G++PT
Sbjct: 404 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 463
Query: 366 --------VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
V FNA+ NG ++RA +LLK+M + P+ V++NT++ G C +G+
Sbjct: 464 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC-REGK 522
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+++ L+D M R G D Y+ L+ GY G++++ ++ EM++
Sbjct: 523 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 570
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 165/308 (53%), Gaps = 5/308 (1%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N +L + +++N +++A + ++ + + V T+ M+ CK G ++ A++ M
Sbjct: 196 NDMLSLFLKLNRMEMAWVLYAEMFRLRI-SSTVYTFNIMVNVLCKEGKLKKAREFIGFME 254
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
KPN+++YNT+I+G+ +G +E A++ ++ M +G P+ TY ++I G+C GR++
Sbjct: 255 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 314
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EA L KM G N T+ +++ G C G ++A Y +++ + P V +Y +++
Sbjct: 315 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 374
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
+ G+ EA ++KEMR +G+ P ++N + G +A L +M
Sbjct: 375 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIE 434
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P V+Y ++I L + RM++ +DL ++++ G + D M++ ++ G+C GNVE
Sbjct: 435 PTHVTYTSLIYVLS-RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFM 493
Query: 459 IAHEMVTK 466
+ EM K
Sbjct: 494 LLKEMDRK 501
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 171/346 (49%), Gaps = 15/346 (4%)
Query: 129 LIKAYGDRGNVKAA--IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+I Y RGN++ A I + K IE + Y+Y SL+ + + ++ A F ++V+
Sbjct: 268 IIHGYSSRGNIEGARRILDAMRVKGIEPDS--YTYGSLISGMCKEGRLEEASGLFDKMVE 325
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+VP V TY T+I GYC G +E A D M K P++ YN +++ +G +
Sbjct: 326 IGLVPNAV-TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 384
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + EM +G P+ +TYN +I G G +A L +M G + T+ S++
Sbjct: 385 EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLI 444
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
L + +A +++ ++PDV + +++G C G + A LLKEM + +
Sbjct: 445 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP 504
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +FN + + G+++ A +LL +M + P+ +SYNT+I G GR D++D
Sbjct: 505 PDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY----GRRGDIKD 560
Query: 424 ---LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ D M+ G N Y+ L+K C+ + ++ EMV K
Sbjct: 561 AFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 606
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 184/436 (42%), Gaps = 75/436 (17%)
Query: 75 FNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN-SNKLSDFFISKLIKAY 133
F+++ N N N +TP IT+ ++S S++S ++ S L+ IS ++
Sbjct: 27 FHFSFNRNFNSLASSESTP---PITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNL 83
Query: 134 GDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV--LVRVNSIKLAEEFFHQIVKENVVP 191
+ + + F H CL + + L V L R+ S KLA + Q+
Sbjct: 84 CSKPQL-VSDFIHHLHPH-----CLDTKSYCLAVVLLARLPSPKLALQLLKQV------- 130
Query: 192 PDVSTYTTMIRGYCKMGM-IENAKKVFDVMTVKPNLLA------YNTMINGFCKKGELEE 244
MG I +++FD +T+ + L+ ++ ++ C+ +E
Sbjct: 131 ---------------MGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADE 175
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A KC M +G P T N M+ R++ A +L A+M V T M+
Sbjct: 176 AFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVN 235
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
LC GK +A ++ + P+V SY +I+G+ G + A +L MR +G++P
Sbjct: 236 VLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEP 295
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC------------ 412
+++ ++ + + G L+ A L +M ++ +PN V+YNT+I G C
Sbjct: 296 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 355
Query: 413 ----------------------MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+GRM + +D++ M + G D Y+ L+ GY
Sbjct: 356 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC 415
Query: 451 GNVENVMQIAHEMVTK 466
GN + + +EM++K
Sbjct: 416 GNAKKAFDLHNEMLSK 431
>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
javanica]
Length = 431
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 199/415 (47%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y + L +H + S A SL++
Sbjct: 3 FFTWLSSPANST--FRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P + +
Sbjct: 121 RYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G L+E + + M G +P+ TY+ +I GL +D+ L +M
Sbjct: 180 YNTLMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G N T +++ G C G+ D A+ + ++ + PD +Y + G CK G +
Sbjct: 240 XKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLN 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLKP F++ + + G+LD A K+M Q + + V+Y +I
Sbjct: 300 QAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V + EM
Sbjct: 360 SGLCQ-EGRSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEM 413
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 121/306 (39%), Gaps = 46/306 (15%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---------------------TVKPNLLAYNTM 232
+ +Y TMI C M AK + V+ T + ++ ++ +
Sbjct: 19 LHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 78
Query: 233 INGFCKKGELEEAKKCMNEMMNR-------GCRP-----NELTYNAMIYGLCINGRVDEA 280
I + + G L +A +C CR +L Y +++G
Sbjct: 79 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGF--------- 129
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
++ G+ ++ ++ C G A + + + P V SY ++NG
Sbjct: 130 ---YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNG 186
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
+ ++G DE L M A G++P V++++ + L + +D L +M +PN
Sbjct: 187 YIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPN 246
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V++ T+I G C GR+ ++ +M+ DF Y+ L G C++G++ +
Sbjct: 247 SVTFTTLIDGHC-KNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLI 305
Query: 461 HEMVTK 466
EM K
Sbjct: 306 DEMSMK 311
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 19/264 (7%)
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC------------------RPNEL 262
T + L +Y TMI+ C EAK + +++R R +
Sbjct: 14 TFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIY 73
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
++ +I +G + +A R + T + +L+ L + F G+ +
Sbjct: 74 VFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEI 133
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+E + + ++++ FCK G A S+ + GL+P V S+N + + G L
Sbjct: 134 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRLGXL 193
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
D L M P+ +Y+ +I GL + M D +L D M+ G + ++
Sbjct: 194 DEGFRLKSAMXASGVQPDVYTYSVLINGL-XKESXMDDXNELFDEMLXKGLVPNSVTFTT 252
Query: 443 LLKGYCEEGNVENVMQIAHEMVTK 466
L+ G+C+ G V+ M+I +M+++
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQ 276
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 144/275 (52%), Gaps = 1/275 (0%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
PDV Y M+ GYC G ++ A+++ M V+P+ YNT+I G C +G A + +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLED 191
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M RGC P+ +TY ++ C +A L+ +M G ++ T+ +L G+C G+
Sbjct: 192 MFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGR 251
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
+ A+ +L+N+ P+ SY +V+ G + ++A L++EM +G P V +FN
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L G ++ A+ +L+QMPQ C PN +SYN ++ C K ++ + V+ M+
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQK-KIHKAMEFVELMVSR 370
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G D Y+ LL C G V+ +++ H++ K
Sbjct: 371 GCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDK 405
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 190/383 (49%), Gaps = 20/383 (5%)
Query: 84 NPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAA 142
NP PC A+ L + + A +L S D + + ++ Y G + AA
Sbjct: 97 NPPSPAAVGPC-AALIKKLCASGRTADARRVLAASG--PDVMVYNAMVAGYCGAGQLDAA 153
Query: 143 IFWFHQAKQIENGACLYSYNSLL-GVLVR---VNSIKLAEEFFHQIVKENVVPPDVSTYT 198
+E A Y+YN+L+ G+ R N++ + E+ F + PDV TYT
Sbjct: 154 RRLVADMP-VEPDA--YTYNTLIRGLCGRGRTSNALAVLEDMFRRGCL-----PDVVTYT 205
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
++ CK + A K+ D M K P+++ YN ++NG C++G +E+A + + + +
Sbjct: 206 ILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSY 265
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
GC PN ++YN ++ GL R ++A+ LM +M G NV T ++ LC G + A
Sbjct: 266 GCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPA 325
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ L + + P+ SY +++ FCK K +A+ ++ M +RG P + S+N +
Sbjct: 326 MEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTA 385
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L NGE+D AI LL Q+ C P +SYNT+I GL A G+ ++ +L+D M G
Sbjct: 386 LCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKA-GKTKEALELLDEMTSKGLQP 444
Query: 436 DFTMYSCLLKGYCEEGNVENVMQ 458
D YS + G C E +E ++
Sbjct: 445 DIITYSTIASGLCREDRIEEAVR 467
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 169/341 (49%), Gaps = 5/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L++A R K A+ + + +YN +L + + ++ A EF +
Sbjct: 207 LLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYG 266
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P VS Y +++G E+A+K+ + M K PN++ +N +I+ C++G +E A
Sbjct: 267 CEPNTVS-YNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPA 325
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + +M GC PN L+YN +++ C ++ +A + M G ++ ++ ++L
Sbjct: 326 MEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTA 385
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ D A+ L + + +P + SY VI+G K GK+ EA+ LL EM ++GL+P
Sbjct: 386 LCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPD 445
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +++ + L ++ A+ ++ M P YN I+ GLC + + DL
Sbjct: 446 IITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRR-ETHNAIDLF 504
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI SG + + Y+ L++G EG V+ ++ ++ ++
Sbjct: 505 AYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSR 545
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 4/230 (1%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG V+ A+ Q Q SYN LL + I A EF +V P D+
Sbjct: 319 RGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYP-DIV 377
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
+Y T++ C+ G ++ A ++ + K P L++YNT+I+G K G+ +EA + ++EM
Sbjct: 378 SYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEM 437
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
++G +P+ +TY+ + GLC R++EA K++ G + + + ++L GLC +
Sbjct: 438 TSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRET 497
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
A+ ++ + P+ +Y +++ G G EA L ++ +RG+
Sbjct: 498 HNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 34/257 (13%)
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTY----NAMIYGLCINGRVDEAKMLMAK-----MR 288
++GEL++A + ++ + G P A+I LC +GR +A+ ++A M
Sbjct: 79 RRGELDDALRLVDSLA--GLNPPSPAAVGPCAALIKKLCASGRTADARRVLAASGPDVMV 136
Query: 289 LNGF----------------------KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
N + + T+ ++++GLC G+ A+ L ++
Sbjct: 137 YNAMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRG 196
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
PDV +Y +++ CK +A+ LL EM +G P + ++N V + + G ++ A+
Sbjct: 197 CLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAM 256
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
LK +P C PN VSYN ++ GL A+ R +D E L++ M G + ++ L+
Sbjct: 257 EFLKNLPSYGCEPNTVSYNIVLKGLFTAE-RWEDAEKLMEEMAHKGCPPNVVTFNMLISF 315
Query: 447 YCEEGNVENVMQIAHEM 463
C G VE M++ +M
Sbjct: 316 LCRRGLVEPAMEVLEQM 332
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A G V AI HQ K L SYN+++ L + K A E ++ +
Sbjct: 382 LLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKG 441
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ PD+ TY+T+ G C+ IE A + F M ++P YN ++ G CK+ E A
Sbjct: 442 L-QPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNA 500
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
M++ GC PNE TY ++ GL G V EA+ L A++ G V K M KG
Sbjct: 501 IDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG----VVNKKLMKKG 556
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 181/342 (52%), Gaps = 8/342 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQ-AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
+ +AYG + A+ FH+ + + S+NS+L V++ EF+ +V
Sbjct: 118 VFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNS 177
Query: 188 NV---VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
N+ + P+ ++ +I+ CK+G ++ A +VF M K P+ Y T+++G CK+
Sbjct: 178 NMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEER 237
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++EA ++EM + GC P+ + YN +I GLC G + L+ M L G N T+ +
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNT 297
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GLC+ GK D+AV L ++ + P+ +Y +ING K ++ + LL M RG
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERG 357
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ ++ + L + G+ + A+ L K+M + C PN V Y+ +I GLC +G+ +
Sbjct: 358 YRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLC-REGKPNEA 416
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+++++ MI SG + YS L+KG+ + G E +Q+ EM
Sbjct: 417 KEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREM 458
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 178/345 (51%), Gaps = 11/345 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFH---QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+IKA G V AI F + K + +G Y+Y +L+ L + I A ++
Sbjct: 193 VIKALCKLGFVDRAIEVFRGMPEKKCLPDG---YTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
E P V Y +I G CK G + K+ D M +K PN + YNT+I+G C KG+L
Sbjct: 250 SEGCSPSPV-IYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKL 308
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A + M++ C PN++TY +I GL R + L+ M G++ N + +
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVL 368
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GL GK ++A+ + + E P++ Y VI+G C+ GK +EA +L M + G
Sbjct: 369 ISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGC 428
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P V++++++ + + G + AI + ++M + C N Y+ +I GLC GR+++
Sbjct: 429 LPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLC-GVGRVKEAM 487
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ +M+ G D YS ++KG C G+++ +++ HEM+ ++
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQE 532
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 100/196 (51%), Gaps = 6/196 (3%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
P++ Y+ +I G C+ G AK++ + M PN+ Y++++ GF K G EEA +
Sbjct: 395 PNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQV 454
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
EM GC NE Y+ +I GLC GRV EA M+ +KM G K + + SM+KGLC
Sbjct: 455 WREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCG 514
Query: 309 VGKFDQAVGYLRNVM---EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+G D A+ ++ E PDV +Y ++++G C A+ LL M RG P
Sbjct: 515 IGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPD 574
Query: 366 VFSFNAVFRILVENGE 381
V + N L E +
Sbjct: 575 VITCNTFLNTLSEKSD 590
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 125/244 (51%), Gaps = 10/244 (4%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y+ +I G K G E A ++ M K PN++ Y+ +I+G C++G+ EAK+ +N M+
Sbjct: 365 YSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMI 424
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+ GC PN TY++++ G G +EA + +M G N + ++ GLC VG+
Sbjct: 425 SSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVK 484
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR---GLKPTVFSFN 370
+A+ ++ + PD +Y +I G C IG D A+ L EM + +P V ++N
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD----VEDLVD 426
+ L ++ RA+ LL M C P+ ++ NT + L ++ +E+LV
Sbjct: 545 ILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVA 604
Query: 427 RMIR 430
R+++
Sbjct: 605 RLLK 608
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 118/296 (39%), Gaps = 67/296 (22%)
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+M + ++ FK ST SM++ +G F L + N +S+ VV
Sbjct: 62 QMFKSAPKMGSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRA 121
Query: 341 FCKIGKSDEAISLLKEM-------------------------RARGLK------------ 363
+ K ++A+ L M RGL+
Sbjct: 122 YGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNM 181
Query: 364 ---PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
P SFN V + L + G +DRAI + + MP+ CLP+ +Y T++ GLC + R+ +
Sbjct: 182 NISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEE-RIDE 240
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK-------------- 466
L+D M G + +Y+ L+ G C++G++ V ++ M K
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIH 300
Query: 467 ----KGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVVIMERTVEDGKR 518
KG+L K + L R+V + + VT G+ I+ V +R DG R
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV--------KQRRAMDGAR 348
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 95 YTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y+A+ D L + A +L +S L + + S L+K + G + AI + +
Sbjct: 400 YSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMD 459
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + Y+ L+ L V +K A + +++ + PD Y++MI+G C +G +
Sbjct: 460 ETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI-KPDTVAYSSMIKGLCGIGSM 518
Query: 211 ENAKKVFDVMTVK------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
+ A K++ M + P+++ YN +++G C + ++ A +N M++RGC P+ +T
Sbjct: 519 DAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITC 578
Query: 265 NAMIYGL------CINGRV---DEAKMLMAKMRLNG 291
N + L C GR + L+ + R++G
Sbjct: 579 NTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSG 614
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 189/379 (49%), Gaps = 25/379 (6%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ + L S + A SL +N S + + LI ++ G ++ A WF +
Sbjct: 463 YSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEML 522
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ +Y +L+ ++ + +A+E F ++ E P+V TYT +I G+CK G I
Sbjct: 523 HKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGC-KPNVVTYTALIDGHCKAGQI 581
Query: 211 ENAKKVFDVMTVK-------------------PNLLAYNTMINGFCKKGELEEAKKCMNE 251
E A +++ M PN++ Y +++G CK ++EA + ++
Sbjct: 582 EKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDT 641
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ GC PN++ Y+A+I G C G++ +A+ + KM G+ N+ T+ S + L +
Sbjct: 642 MLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNR 701
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D + L ++E + P+V Y +++G CKIGK+DEA L+ +M +G P V ++ A
Sbjct: 702 LDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTA 761
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ ++G++++ + L + M C PNF++Y +I C + G + + L+D M ++
Sbjct: 762 MIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLI-NHCCSNGLLDEAYKLLDEMKQT 820
Query: 432 GHNLDFTMYSCLLKGYCEE 450
+ +++G+ +E
Sbjct: 821 YWPKHILSHRKIIEGFSQE 839
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 142/337 (42%), Gaps = 46/337 (13%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ L + + A + H++ + +P +V TY ++ G + G + K++ +M
Sbjct: 282 YNRMVSGLCEASLFEEAMDILHRMRSSSCIP-NVVTYRILLSGCLRKGQLGRCKRILSMM 340
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN--- 274
+ PN +N++I+ +CK + A K +M+ GC+P L YN I +C N
Sbjct: 341 ITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQ 400
Query: 275 --------------------------------------GRVDEAKMLMAKMRLNGFKDNV 296
G+ D+A ++ +M GF +
Sbjct: 401 PSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDD 460
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
ST+ ++ LC K ++A + + P V +Y ++I+ FCK G +A E
Sbjct: 461 STYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDE 520
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +G P V ++ A+ ++ ++ A L + M C PN V+Y +I G C A G
Sbjct: 521 MLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKA-G 579
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+++ + RM + D Y L CE NV
Sbjct: 580 QIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNV 616
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 149/331 (45%), Gaps = 27/331 (8%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK---------MGMIE 211
+NSL+ + A + F +++K P Y I C + ++E
Sbjct: 352 FNSLIHAYCKSRDYSYAYKLFKKMIKCGC-QPGYLVYNIFIGSVCSNEEQPSSDILDLVE 410
Query: 212 NAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
A + V N + + C G+ ++A K + EMM +G P++ TY+ +I L
Sbjct: 411 KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFL 470
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +V++A L +M+ NG +V T+ ++ C G QA + ++ P+V
Sbjct: 471 CDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNV 530
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I+ + K + A L + M G KP V ++ A+ + G++++A + +
Sbjct: 531 VTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYAR 590
Query: 392 M------PQMDCL----------PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
M MD PN ++Y ++ GLC A R+++ +L+D M+ G
Sbjct: 591 MRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKA-NRVKEAHELLDTMLAHGCEP 649
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +Y ++ G+C+ G +++ ++ +M +
Sbjct: 650 NQIVYDAVIDGFCKIGKLQDAQEVFTKMSER 680
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 169/454 (37%), Gaps = 54/454 (11%)
Query: 42 SSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDV 101
+ Q QF L ++V +V+ NP + FF WA Y HT + + D+
Sbjct: 93 THQFFRQFRNQLNDSLVVEVMNNVKNPELCVKFFLWAGRQI----GYSHTPQVFDKLLDL 148
Query: 102 L------LSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG 155
L + + + ++L ++ L++ G A+ + K
Sbjct: 149 LGCNVNADDRVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYK 208
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
+YN+L+ V +R + + A +++ V D T + CK G A
Sbjct: 209 PSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVM-DRYTLSCFAYSLCKGGKCREAFD 267
Query: 216 VFD-VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ D P+ + YN M++G C+ EEA ++ M + C PN +TY ++ G
Sbjct: 268 LIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRK 327
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++ K +++ M G N S++ C + A + +++ P Y
Sbjct: 328 GQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVY 387
Query: 335 EVVING-----------------------------------------FCKIGKSDEAISL 353
+ I C GK D+A +
Sbjct: 388 NIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKI 447
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
+ EM +G P +++ V L + ++++A L ++M + +P+ +Y +I C
Sbjct: 448 ICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCK 507
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
A G +Q D M+ G + Y+ L+ Y
Sbjct: 508 A-GLIQQARKWFDEMLHKGCTPNVVTYTALIHAY 540
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 38/207 (18%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
++E P+V TYT MI G+ K G IE ++F M K PN + Y +IN C G
Sbjct: 747 MEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGL 806
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN--------------------------- 274
L+EA K ++EM + L++ +I G
Sbjct: 807 LDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLYRILI 866
Query: 275 ------GRVDEAKMLMAKMRLNGFK--DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
GR++ A L+ ++ + N + S+++ L K D+A+ +++ N
Sbjct: 867 DNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKN 926
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISL 353
+ P++ +I G K+ K EA+ L
Sbjct: 927 VVPELSILVHLIKGLIKVDKWQEALQL 953
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 203/406 (50%), Gaps = 27/406 (6%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNKL 121
P + Y HT Y + +L +H ++ A SL++ ++
Sbjct: 4 PGNSSYRHTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQI 63
Query: 122 SDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
SDF++ S L+ AY + G V+ A+ F KQ + + +L L+ KL +F
Sbjct: 64 SDFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDF 123
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+ +++ E P + + +++ +CK G + A+ VFD +T ++P+++++NT+ING+
Sbjct: 124 YKEVL-ECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYI 182
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G+L+E + + M G +P+ TY+ +I GLC G++DEA L +M NG N
Sbjct: 183 KLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGV 242
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T +++ G C K D A+ + ++ ++PD+ +Y +I G CK G+ + L+ EM
Sbjct: 243 TFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEM 302
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
GLKP S+ + + G+L+ A+ L +M Q + V+Y +I LC +GR
Sbjct: 303 IMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLC-REGR 361
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D E ++ M+ G D Y+ ++ +C++ + + ++ EM
Sbjct: 362 AGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREM 407
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 169/320 (52%), Gaps = 16/320 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ V+ AEE + +++ ++P + TY++MI G+CK ++ A+ +F +
Sbjct: 293 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTI-TYSSMIDGFCKQNRLDAAEHMFYL 351
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ +NT+I G+C+ +++ K ++EM G N +TY +I+G C G
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 411
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN-------- 328
++ A+ L+ +M +G NV T ++L GLC GK A+ + + ++ M+
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFN 471
Query: 329 ---PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
PDV++Y ++I+G GK EA L +EM RG+ P ++N+V L + LD A
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ M PN V++ T+I G C A GR+ D +L M R G + Y L+
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKA-GRVDDGLELFCEMGRRGIVANAITYITLIH 590
Query: 446 GYCEEGNVENVMQIAHEMVT 465
G+ + GN+ + I EM+
Sbjct: 591 GFRKVGNINGALDIFQEMMA 610
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 189/401 (47%), Gaps = 25/401 (6%)
Query: 88 YHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
+H T ++ + L IS A L K + + L+ G V A+
Sbjct: 144 FHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLD 203
Query: 148 -------QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
Q QI G + + + +N ++ EE H +K NVV + T M
Sbjct: 204 RMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH--IKPNVVIWPLERRTCM 261
Query: 201 IRGYCKMGMIENAKKVFDVM----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
I G+C G A+++ M + P+++ YN +IN F K+G+ EA++ +EM+ RG
Sbjct: 262 INGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 321
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
P+ +TY++MI G C R+D A+ + M G ++ T +++ G C + D +
Sbjct: 322 IIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGI 381
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
L + EA + + +Y +I+GFC++G + A LL+EM + G+ P V + N + L
Sbjct: 382 KLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGL 441
Query: 377 VENGELDRAILLLKQM--PQMD---------CLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+NG+L A+ + K M +MD P+ +YN +I GL + +G+ + E+L
Sbjct: 442 CDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGL-INEGKFLEAEELY 500
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M G D Y+ ++ G C++ ++ Q+ M +K
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSK 541
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 168/367 (45%), Gaps = 44/367 (11%)
Query: 143 IFWFHQAKQIENGAC-LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
+ H+ ++ C YS+ L+ + + A F +I K P V T++T++
Sbjct: 97 VISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGF-HPTVVTFSTLL 155
Query: 202 RGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
G C I A +F M KPN++ + T++NG C++G + EA ++ M+ G +PN+
Sbjct: 156 HGLCVEDRISEALDLFHQM-CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQ 214
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMR-LNGFKDNV-----STHKSMLKGLCVVGKFDQA 315
+TY ++ G+C G A L+ KM ++ K NV M+ G C G++ +A
Sbjct: 215 ITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEA 274
Query: 316 VGYLRNVME-ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
L+ ++E ++PDV +Y +IN F K GK EA L EM RG+ P+ +++++
Sbjct: 275 QQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMID 334
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK------------------- 415
+ LD A + M C P+ +++NT+I G C AK
Sbjct: 335 GFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVA 394
Query: 416 ---------------GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
G + +DL+ M+ SG + + LL G C+ G +++ +++
Sbjct: 395 NTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMF 454
Query: 461 HEMVTKK 467
M K
Sbjct: 455 KAMQKSK 461
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 15/278 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y V I H+ + A +Y +L+ +V + A++ ++V
Sbjct: 367 LIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSG 426
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------VKPNLLAYNTMIN 234
V P +V T T++ G C G +++A ++F M V+P++ YN +I+
Sbjct: 427 VCP-NVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILIS 485
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
G +G+ EA++ EM +RG P+ +TYN++I+GLC R+DEA + M F
Sbjct: 486 GLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSP 545
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
NV T +++ G C G+ D + + + + +Y +I+GF K+G + A+ +
Sbjct: 546 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIF 605
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+EM A G+ P + + L EL RA+ +L+ +
Sbjct: 606 QEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 154/324 (47%), Gaps = 15/324 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I + + + AA F+ + ++N+L+ R + + H++ +
Sbjct: 330 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 389
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+V + TYTT+I G+C++G + A+ + M V PN++ NT+++G C G+L+
Sbjct: 390 AGLVANTI-TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLK 448
Query: 244 EAKKCMNEMMNR-----------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+A + M G P+ TYN +I GL G+ EA+ L +M G
Sbjct: 449 DALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 508
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ T+ S++ GLC + D+A ++ + +P+V ++ +ING+CK G+ D+ +
Sbjct: 509 VPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 568
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
L EM RG+ ++ + + G ++ A+ + ++M P+ ++ ++ GL
Sbjct: 569 LFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLW 628
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLD 436
+ + V L D + G+ L+
Sbjct: 629 SKEELKRAVAMLEDLQMSVGYQLE 652
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 150/338 (44%), Gaps = 51/338 (15%)
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE---NAKKVFDVMTVKPNLL 227
+ ++ A + F +V+ +P V + ++ +MG ++ + + ++ V N
Sbjct: 56 IKGLEDAIDLFGDMVRSRPLP-SVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAY 114
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
++ ++ FC +L A ++ G P +T++ +++GLC+ R+ EA L +M
Sbjct: 115 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM 174
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV---------- 337
K NV T +++ GLC G+ +AV L ++E + P+ +Y +
Sbjct: 175 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 230
Query: 338 -------------------------------INGFCKIGKSDEAISLLKEMRAR-GLKPT 365
INGFC G+ EA LL+EM R + P
Sbjct: 231 VSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPD 290
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V ++NA+ V+ G+ A L +M +P+ ++Y+++I G C + R+ E +
Sbjct: 291 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFC-KQNRLDAAEHMF 349
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M G + D ++ L+ GYC V++ +++ HEM
Sbjct: 350 YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 387
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 11/240 (4%)
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+GF + LE+A +M+ P+ + + ++ + GR+D L KM +
Sbjct: 51 SGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVP 110
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
N + ++K C K A+ + + +P V ++ +++G C + EA+ L
Sbjct: 111 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDL 170
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
+M KP V +F + L G + A+ LL +M + PN ++Y TI+ G+C
Sbjct: 171 FHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMC- 225
Query: 414 AKGRMQDVEDLVDRMIRSGH---NL---DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G +L+ +M H N+ +C++ G+C G Q+ EM+ +K
Sbjct: 226 KMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERK 285
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 199/401 (49%), Gaps = 27/401 (6%)
Query: 88 YHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNKLSDFFI 126
+ HT Y L +H + S A SL++ + SD ++
Sbjct: 4 FRHTLHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSDIYV 63
Query: 127 -SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
S LI AY + G ++ AI + ++ + + +L L+++ KL F+ +I+
Sbjct: 64 FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEIL 123
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
E P + + ++ +CK G I A VFD +T ++P++++YNT++NG+ + G+L
Sbjct: 124 -ECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 182
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+E + + M G +P+ TY+ +I GLC +D+A L +M + G N T ++
Sbjct: 183 DEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTL 242
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G C G+ D A+ + ++ + PD+ +Y ++ G CK G ++A L+ EM +GL
Sbjct: 243 IDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGL 302
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KP F++ + + G+LD A K+M Q + + V+Y +I GLC +GR D E
Sbjct: 303 KPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQ-EGRSXDAE 361
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 362 KMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 402
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 161/291 (55%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F + + SYN+L+ +R+ L E F
Sbjct: 132 YFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGD--LDEGFRLK 189
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
++ + V PDV TY+ +I G CK +++A ++FD M VK PN + + T+I+G CK
Sbjct: 190 SAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKN 249
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN ++YGLC G +++A L+ +M G K + T+
Sbjct: 250 GRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTY 309
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G D A + + +++ N+ D +Y +I+G C+ G+S +A +L+EM +
Sbjct: 310 TTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLS 369
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GLKP ++ + + G++ + LLK+M + +P V+YN ++ G
Sbjct: 370 VGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 113/264 (42%), Gaps = 19/264 (7%)
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD-- 278
T + L +Y T I+ C EAK + +++R + + A I R D
Sbjct: 3 TFRHTLHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSDIY 62
Query: 279 -EAKMLMAKMRLNGFKDNV---------------STHKSMLKGLCVVGKFDQAVGYLRNV 322
+ ++ A + +D + T + +L+ L + F G+ +
Sbjct: 63 VFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEI 122
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+E + + ++++ FCK G A + + GL+P+V S+N + + G+L
Sbjct: 123 LECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 182
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
D L M P+ +Y+ +I GLC + M D +L D M+ G + ++
Sbjct: 183 DEGFRLKSAMRASGVQPDVYTYSVLINGLC-KESXMDDANELFDEMLVKGLVPNXVTFTT 241
Query: 443 LLKGYCEEGNVENVMQIAHEMVTK 466
L+ G+C+ G V+ M+I +M+++
Sbjct: 242 LIDGHCKNGRVDLAMEIYKQMLSQ 265
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 208/455 (45%), Gaps = 52/455 (11%)
Query: 58 VTKVIYEQTNPYHALFFFNWASN-PNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
V K++ + NP+ AL F+ + P Y HT + I L L++ + +++
Sbjct: 13 VIKLLKSEKNPHSALSIFDSVTRFPG-----YSHTPYVFHHILKRLFDPKLVAHVSRIVE 67
Query: 117 ----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN-GACLYSYNSLLGVLVRV 171
K + +IKAY A+ F + +I + SYNSLL L+
Sbjct: 68 LIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIES 127
Query: 172 NSIKLAEEFFHQIVKENVVP----------------------------------PDVSTY 197
N AE FF + P PDV +Y
Sbjct: 128 NKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSY 187
Query: 198 TTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM- 253
T+I K G + +A K+FD M V P++ YN +I+GF KKG++ A + ++
Sbjct: 188 GTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLK 247
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
PN +YN MI GLC G+ DE+ + +M+ N ++ T+ +++ GLC G D
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A + + E ++PDV Y ++NG+ + G+ +E + L K M G + TV S+N +
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILI 366
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
R L EN ++D AI + + +P+ DC + ++Y ++ GLC G + +++
Sbjct: 367 RGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC-KNGYLNKALSILEEAENGRG 425
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+LD YS ++ G C EG ++ V + +M TK G
Sbjct: 426 DLDTFAYSSMINGLCREGRLDEVAGVLDQM-TKHG 459
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 169/325 (52%), Gaps = 6/325 (1%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+H+ K+ E G LY+Y++L+ L ++ A + ++ EN V PDV Y TM+ GY
Sbjct: 278 WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA-ENGVSPDVVVYNTMLNGYL 336
Query: 206 KMGMIENAKKVFDVMTVKP--NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+ G IE +++ VM + +++YN +I G + +++EA + + C + +T
Sbjct: 337 RAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMT 396
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKD-NVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
Y +++GLC NG +++A ++ + NG D + + SM+ GLC G+ D+ G L +
Sbjct: 397 YGVLVHGLCKNGYLNKALSILEEAE-NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 455
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ P+ VINGF + K ++A+ M ++G PTV ++N + L +
Sbjct: 456 TKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF 515
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
A L+K+M PN ++Y+ ++ GLC K ++ +L + + G D M++
Sbjct: 516 SEAYALVKEMLHKGWKPNMITYSLLMNGLCQGK-KLDMALNLWCQALEKGFKPDVKMHNI 574
Query: 443 LLKGYCEEGNVENVMQIAHEMVTKK 467
++ G C G VE+ +Q+ EM +K
Sbjct: 575 IIHGLCSSGKVEDALQLYSEMKQRK 599
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 134/267 (50%), Gaps = 6/267 (2%)
Query: 150 KQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
K +E C + SYN L+ L + A + +++ E D TY ++ G CK
Sbjct: 349 KVMEKEGCRTVVSYNILIRGLFENAKVDEAISIW-ELLPEKDCCADSMTYGVLVHGLCKN 407
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G + A + + + AY++MING C++G L+E +++M GC+PN
Sbjct: 408 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC 467
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
NA+I G ++++A M G V T+ +++ GL +F +A ++ ++
Sbjct: 468 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLH 527
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
P++ +Y +++NG C+ K D A++L + +G KP V N + L +G+++
Sbjct: 528 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGL 411
A+ L +M Q C+PN V++NT++ G
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGF 614
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 3/205 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D Y++MI G C+ G ++ V D MT KPN N +INGF + +LE+A +
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
M+++GC P +TYN +I GL R EA L+ +M G+K N+ T+ ++ GLC
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
K D A+ +E PDVK + ++I+G C GK ++A+ L EM+ R P + +
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 370 NAVFRILVENGELDRAILLLKQMPQ 394
N + + + +RA + + Q
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQ 632
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 144/309 (46%), Gaps = 14/309 (4%)
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVF----DVMTVKPNLLAYNTMINGFCKKGELEEAK 246
P DV+ T+I+ Y K M + A +F ++ +P + +YN+++N + + +EA+
Sbjct: 77 PEDVAL--TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAE 134
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
G PN TYN +I C + D+AK L+ M GF +V ++ +++ L
Sbjct: 135 SFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSL 194
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE-MRARGLKPT 365
G A+ + E + PDV Y ++I+GF K G A + + ++ + P
Sbjct: 195 AKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPN 254
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ S+N + L + G+ D + + +M + + + +Y+T+I GLC G + +
Sbjct: 255 IPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC-GSGNLDGATRVY 313
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTR------ 479
M +G + D +Y+ +L GY G +E +++ M + R + N L R
Sbjct: 314 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENA 373
Query: 480 VVDALLLMW 488
VD + +W
Sbjct: 374 KVDEAISIW 382
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+ L+ L + + +A + Q + E PDV + +I G C G +E+A +++
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQAL-EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSE 594
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
M + PNL+ +NT++ GF K + E A K + ++ N
Sbjct: 595 MKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN 638
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 190/393 (48%), Gaps = 39/393 (9%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
S+ A +LK + ++ L++ G VK A+ + + SY +L+ L
Sbjct: 109 SMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGL 168
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PN 225
+ + A + +I +V PDV YT +I +CK ++ +A ++ M VK PN
Sbjct: 169 CKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPN 228
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++ +N++I GFC G+L+EA +NEM PN T+N +I GLC G V +A +++
Sbjct: 229 VVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLS 288
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
M G + NV T+ S++ G +V + ++A + + P+V SY V+ING CK
Sbjct: 289 VMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNK 348
Query: 346 KSDEAISLLKEMRARGLKP-----------------------------------TVFSFN 370
DEA+ L KEM + + P + ++N
Sbjct: 349 MVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYN 408
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
++ L +N ++D+AI LL +M P+ +Y T++ GLC GR++D + + ++
Sbjct: 409 SLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC-KNGRLKDAQRIYQDLLC 467
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G+ L+ MY+ ++ G C+EG + + + +M
Sbjct: 468 KGYPLNIRMYTVMINGLCKEGFFDEALSLLSQM 500
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 167/330 (50%), Gaps = 20/330 (6%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISK----------LIKAYGDRGNVKAAIF 144
YTAI D L+ A L S+ + K LI + G +K A+
Sbjct: 197 YTAIIDSFCKDKLVIDAYDLY------SEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVG 250
Query: 145 WFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
++ +Y++N L+ L + +K A ++K+ V P+V TYT+++ GY
Sbjct: 251 LLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGV-EPNVVTYTSLMDGY 309
Query: 205 CKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
+ + AK VF+ ++ V PN+ +Y+ MING CK ++EA K EM + PN
Sbjct: 310 FLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNT 369
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+TY+++I GLC +GR+ + L+ ++ G N+ T+ S+L GLC + D+A+ L
Sbjct: 370 VTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTK 429
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ + + PD+ +Y +++G CK G+ +A + +++ +G + + + L + G
Sbjct: 430 MKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGF 489
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
D A+ LL QM C+P+ V+Y T+I L
Sbjct: 490 FDEALSLLSQMEDNGCMPDAVTYETLISAL 519
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 139/243 (57%), Gaps = 6/243 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y SL+ V + A+ F+ I V P +V +Y+ MI G CK M++ A K+F
Sbjct: 301 TYTSLMDGYFLVKEVNKAKHVFNTISLRGVTP-NVHSYSVMINGLCKNKMVDEAVKLFKE 359
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +K PN + Y+++I+G CK G + + ++E+ NRG N +TYN+++ GLC N +
Sbjct: 360 MHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQ 419
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A L+ KM+ G + ++ST+ +++ GLC G+ A ++++ +++ Y V
Sbjct: 420 VDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTV 479
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM--PQ 394
+ING CK G DEA+SLL +M G P ++ + L +N + +A+ LL++M +
Sbjct: 480 MINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARE 539
Query: 395 MDC 397
DC
Sbjct: 540 SDC 542
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 138/281 (49%), Gaps = 5/281 (1%)
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA---KKVFDVMTVKPNLL 227
++++ A F+ I+ N P + + ++ KM + A + ++ ++P +
Sbjct: 30 IDNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMF 89
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+N +IN F +L A + +++ G +P+ +T N ++ GLC+NG+V EA +
Sbjct: 90 TFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHV 149
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM-NPDVKSYEVVINGFCKIGK 346
F + ++ +++ GLC G+ A+ LR + + PDV Y +I+ FCK
Sbjct: 150 IRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKL 209
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
+A L EM + + P V +FN++ G+L A+ LL +M + PN ++N
Sbjct: 210 VIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNI 269
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+I GLC +G ++ ++ MI+ G + Y+ L+ GY
Sbjct: 270 LIDGLC-KEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGY 309
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 127/246 (51%), Gaps = 3/246 (1%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P + +N +++ K + A +M +G +P T+N +I +++ A +
Sbjct: 51 PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+AK+ G++ + T ++L+GLC+ GK +A+ + +V+ + D SY +ING CK
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170
Query: 344 IGKSDEAISLLKEMRARGL-KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
G++ A+ LL+++ L +P V + A+ ++ + A L +M PN V
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++N++I G C+ G++++ L++ M + N + ++ L+ G C+EG V+ +
Sbjct: 231 TFNSLIYGFCIV-GQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSV 289
Query: 463 MVTKKG 468
M+ K+G
Sbjct: 290 MI-KQG 294
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Query: 309 VGKFDQAVGYLRNVMEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
+ D AV +++ N P + + +++ K+ AIS ++M +G++P +F
Sbjct: 30 IDNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMF 89
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+FN + +L+ A ++ ++ ++ P+ V+ NT++ GLC+ G++++ + D
Sbjct: 90 TFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCL-NGKVKEALNFHDH 148
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+IR +LD Y L+ G C+ G +Q+
Sbjct: 149 VIRKRFHLDQVSYGTLINGLCKSGETRAALQL 180
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 166/316 (52%), Gaps = 12/316 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L++ N L+ + I +I+K PP T T+I+G C G ++ A
Sbjct: 93 LFTLNILINCFCHMGQITFGFSVLAKILKRGY-PPSTVTLNTLIKGLCLKGQVKKALHFH 151
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D + + N + Y T+ING CK G+ A K + ++ R +P+ + Y+ +I LC
Sbjct: 152 DKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKY 211
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
V EA L ++M + G +V T+ +++ G C+VGK +A+G L ++ +NPDV +Y
Sbjct: 212 QLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTY 271
Query: 335 EVVINGFCKIGKSDEA-------ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
++++ CK GK EA L+ EMR RG V +++++ L +NG LDRAI
Sbjct: 272 TILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 331
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L +M PN ++ ++ GL GR++D +++ ++ G++L+ Y+ ++ G+
Sbjct: 332 LFNKMKDQGIRPNMFTFTILLDGLWKG-GRLKDAQEVFQDLLTKGYHLNVYTYNVMINGH 390
Query: 448 CEEGNVENVMQIAHEM 463
C++G +E + + +M
Sbjct: 391 CKQGLLEEALTMLSKM 406
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 171/336 (50%), Gaps = 16/336 (4%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
S+ A +LK S ++ LIK +G VK A+ FH K + G L Y +L+
Sbjct: 114 SVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALH-FHD-KLLAQGFQLNQVGYGTLIN 171
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
+ ++ + A + +I + PDV Y+T+I CK ++ A +F MTVK
Sbjct: 172 GVCKIGDTRAAIKLLKKI-DGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 230
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM- 282
+++ YNT+I GFC G+L+EA +N M+ + P+ TY ++ LC G+V EAK
Sbjct: 231 ADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRR 290
Query: 283 ------LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
L+ +MR G +V T+ S++ GLC G D+A+ + + + P++ ++ +
Sbjct: 291 ISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTI 350
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G K G+ +A + +++ +G V+++N + + G L+ A+ +L +M
Sbjct: 351 LLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 410
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
C+PN ++ TII L K E L+ +MI G
Sbjct: 411 CIPNAFTFETIIIAL-FKKDENDKAEKLLRQMIARG 445
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 6/248 (2%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++P+L N +IN FC G++ + +++ RG P+ +T N +I GLC+ G+V +A
Sbjct: 89 IQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKAL 148
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
K+ GF+ N + +++ G+C +G A+ L+ + PDV Y +I+
Sbjct: 149 HFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDAL 208
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK EA L EM +G+ V ++N + G+L AI LL M P+
Sbjct: 209 CKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDV 268
Query: 402 VSYNTIICGLCM------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+Y ++ LC AK R+ V DL+D M G D YS L+ G C+ G+++
Sbjct: 269 YTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDR 328
Query: 456 VMQIAHEM 463
+ + ++M
Sbjct: 329 AIALFNKM 336
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 117/217 (53%), Gaps = 11/217 (5%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
A + +YN+L+ V +K A + +V + + PDV TYT ++ CK G ++ AK+
Sbjct: 231 ADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTI-NPDVYTYTILVDALCKEGKVKEAKR 289
Query: 216 ----VFDVMT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
V+D++ +++ Y+++I+G CK G L+ A N+M ++G RPN T+
Sbjct: 290 RISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFT 349
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
++ GL GR+ +A+ + + G+ NV T+ M+ G C G ++A+ L + +
Sbjct: 350 ILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDN 409
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
P+ ++E +I K ++D+A LL++M ARGL
Sbjct: 410 GCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 446
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 116/235 (49%), Gaps = 2/235 (0%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M P ++ +N +++ F K + + +G +P+ T N +I C G++
Sbjct: 53 MRHTPPIIQFNKILDSFAKMKHYSTVS-LSHRLELKGIQPDLFTLNILINCFCHMGQITF 111
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
++AK+ G+ + T +++KGLC+ G+ +A+ + ++ + Y +IN
Sbjct: 112 GFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLIN 171
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G CKIG + AI LLK++ R KP V ++ + L + + A L +M
Sbjct: 172 GVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 231
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ V+YNT+I G C+ G++++ L++ M+ N D Y+ L+ C+EG V+
Sbjct: 232 DVVTYNTLIYGFCIV-GKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVK 285
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 169/326 (51%), Gaps = 11/326 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS++ R + A F Q+V E PD+ TYT +I G+CK + ++
Sbjct: 146 TYNSIITGFCRARRVDEAHGFMEQMVAEGC-HPDIITYTALIGGFCKSRDVGRGLELLGE 204
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+T + P+++ Y+T+I+G CK G L +A EM C P +TYN++I G C G
Sbjct: 205 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGD 261
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEA L+ KM + +V T+ +++ C +G+ D A + ++ ++PDV ++
Sbjct: 262 MDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 321
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G C G+ ++A+ LL+E+ RG PT++++N V + ++ +A L+
Sbjct: 322 LVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRG 381
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL--DFTMYSCLLKGYCEEGNVE 454
+PN V+YN ++ G C A GR +D++ G MY+ +L C +G +
Sbjct: 382 FVPNTVTYNILVAGCCRA-GRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTD 440
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRV 480
+ +Q EM+ ++G + F T V
Sbjct: 441 DAVQFYEEMI-QRGYVPAAATFATVV 465
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 163/312 (52%), Gaps = 9/312 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y L+ L + ++ A + ++V VP D +T T +++ C +++A+++ +
Sbjct: 41 TYTKLVHGLSKARRLRDAVQVLQEMVSARHVP-DNTTLTVVVQSLCLGDRVDDARELVEE 99
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + N + Y+ +++G CK L+EA + M RGC P +TYN++I G C R
Sbjct: 100 MLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARR 159
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA M +M G ++ T+ +++ G C + + L V PD+ +Y
Sbjct: 160 VDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYST 219
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G CK G+ +A+ + +EM PT ++N++ G++D AI LL +M
Sbjct: 220 VIDGLCKAGRLRDAVDIFEEMSC---APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK 276
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C P+ V+Y T++ C GR+ D +L +M+ + + D ++ L+ G C EG +E+
Sbjct: 277 CAPDVVTYTTLMSAFC-KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDA 335
Query: 457 MQIAHEMVTKKG 468
+++ E +T++G
Sbjct: 336 LELLEE-ITRRG 346
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 166/343 (48%), Gaps = 39/343 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +Y +L+G + + E ++ + P D+ TY+T+I G CK G + +A +F
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTP-DIVTYSTVIDGLCKAGRLRDAVDIF 237
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ M+ P + YN++I G+C+ G+++EA + + +M++ C P+ +TY ++ C GR+
Sbjct: 238 EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D+A L +M N +V T S++ GLC G+ + A+ L + P + +Y V
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 357
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFN--------------------------- 370
++G+CK + +A L+ + R+RG P ++N
Sbjct: 358 VDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGG 417
Query: 371 ------AVFRILVE----NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
A++ I+++ +G D A+ ++M Q +P ++ T++ LC A + Q
Sbjct: 418 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAH-QPQQ 476
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+L++ MI+ GH ++ YC G ++ ++A E+
Sbjct: 477 AHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 166/348 (47%), Gaps = 41/348 (11%)
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLA 228
++ +L EE H+ + N + TY+ ++ G CK ++ A + + M + P ++
Sbjct: 92 DARELVEEMLHRGMAANAI-----TYSALVDGLCKCERLDEAVALVETMAERGCAPTVVT 146
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YN++I GFC+ ++EA M +M+ GC P+ +TY A+I G C + V L+ ++
Sbjct: 147 YNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVT 206
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAV--------------------GYLR-------- 320
GF ++ T+ +++ GLC G+ AV GY R
Sbjct: 207 RRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAI 266
Query: 321 ----NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+++ PDV +Y +++ FCK+G+ D+A L ++M A L P V +F ++ L
Sbjct: 267 RLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 326
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
G ++ A+ LL+++ + C P +YN ++ G C A +++ E+LV G +
Sbjct: 327 CGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKAN-QVRKAEELVADFRSRGFVPN 385
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
Y+ L+ G C G + +Q ++ ++ G ++DAL
Sbjct: 386 TVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDAL 433
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 147/278 (52%), Gaps = 6/278 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM--TVKPNLLAYNTMINGFCKKGELEEAKKCM 249
P + +I G C+ G + +A V+ M P+ L Y +++G K L +A + +
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVL 62
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
EM++ P+ T ++ LC+ RVD+A+ L+ +M G N T+ +++ GLC
Sbjct: 63 QEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKC 122
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ D+AV + + E P V +Y +I GFC+ + DEA +++M A G P + ++
Sbjct: 123 ERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITY 182
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
A+ ++ ++ R + LL ++ + P+ V+Y+T+I GLC A GR++D D+ + M
Sbjct: 183 TALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKA-GRLRDAVDIFEEMS 241
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ + Y+ L+ GYC G+++ +++ +MV K
Sbjct: 242 CAPTAI---TYNSLIGGYCRAGDMDEAIRLLGKMVDDK 276
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 134/305 (43%), Gaps = 42/305 (13%)
Query: 95 YTAITDVLLSHSLISIAASLLKN-SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE 153
Y+ + D L + A + + S + + LI Y G++ AI + +
Sbjct: 217 YSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK 276
Query: 154 NGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
+ +Y +L+ ++ + A E F Q+V N + PDV T+T+++ G C G +E+A
Sbjct: 277 CAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVA-NKLSPDVVTFTSLVDGLCGEGRMEDA 335
Query: 214 KKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
++ + +T + P + YN +++G+CK ++ +A++ + + +RG PN +TYN ++ G
Sbjct: 336 LELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAG 395
Query: 271 -------------------------------------LCINGRVDEAKMLMAKMRLNGFK 293
LC +GR D+A +M G+
Sbjct: 396 CCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYV 455
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+T +++ LC + QA L +++ P + + V++ +C+ G +A L
Sbjct: 456 PAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 515
Query: 354 LKEMR 358
E+R
Sbjct: 516 ASELR 520
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
MNP + VVI G C+ G+ A+ + ++M P ++ + L + L A+
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAV 59
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+L++M +P+ + ++ LC+ R+ D +LV+ M+ G + YS L+ G
Sbjct: 60 QVLQEMVSARHVPDNTTLTVVVQSLCLGD-RVDDARELVEEMLHRGMAANAITYSALVDG 118
Query: 447 YCEEGNVENVMQIAHEMVTK 466
C+ ++ + + M +
Sbjct: 119 LCKCERLDEAVALVETMAER 138
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKEN-VVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+YN L+ R A ++ Q+ E P V+ Y ++ C+ G ++A + ++
Sbjct: 388 TYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYE 447
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + P + T++ CK + ++A + + EM+ G P T +A++ C G
Sbjct: 448 EMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAG 507
Query: 276 RVDEAKMLMAKMRLNGFKDNVST 298
+ +A L +++RL + D S+
Sbjct: 508 MIQKADELASELRL--YTDKSSS 528
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 174/339 (51%), Gaps = 28/339 (8%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI ++ G ++ A WF + + + + +Y +LL ++ + A + FH++V
Sbjct: 496 LIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAG 555
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM-------------------TVKPNLLAY 229
P + TY+ ++ G CK G + A +V+ M ++ PN++ Y
Sbjct: 556 CAPNTI-TYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTY 614
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+I+G CK ++ +A++ ++ M + GC PN + Y+A+I G C G++D A+ + +M
Sbjct: 615 GALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSK 674
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G+ V T+ S++ + + D A+ L ++E++ P+V +Y +I+G C+IG+ +
Sbjct: 675 CGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQK 734
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A+ LL M RG P V ++ ++ L ++G++D ++ L QM C PN+V+Y +I
Sbjct: 735 ALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLI- 793
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
C A G + + L+ M + T + ++GYC
Sbjct: 794 NHCCAAGLLDEAHSLLSEMKQ-------TYWPKYVQGYC 825
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 160/313 (51%), Gaps = 18/313 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++L+ +V + A+E F ++ K +P V TYT++I K ++ A KV M
Sbjct: 649 YDALIDGFCKVGKLDNAQEVFFRMSKCGYLPT-VHTYTSLIDAMFKDRRLDLAIKVLSQM 707
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN++ Y MI+G C+ GE ++A K ++ M RGC PN +TY ++I GL +G+V
Sbjct: 708 LESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKV 767
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D + L +M G N T++ ++ C G D+A L + + V+ Y V
Sbjct: 768 DMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSV 827
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMP 393
+ GF K K ++ LL+E+ + G+ S V+ +L+++ G L++A+ L K+M
Sbjct: 828 VQGFSK--KFIASLGLLEELESHGM----VSIAPVYGLLIDSFSKAGRLEKALELHKEMM 881
Query: 394 QMDCLPNFVS---YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
++ N S Y ++I LC+A +++ +L + R G + + + CL+KG +
Sbjct: 882 EVSSSLNITSKDTYTSLIQALCLAS-QLEKAFELYSEITRKGVVPELSAFICLIKGLIKV 940
Query: 451 GNVENVMQIAHEM 463
+Q+ + M
Sbjct: 941 NKWNEALQLCYSM 953
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 175/425 (41%), Gaps = 62/425 (14%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
KL +++I + AI + H+ + + +Y +LL ++ + +
Sbjct: 271 KLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKR 330
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
++ E P+ S + +++ YC A K+ + M P + YN I
Sbjct: 331 IISMMMNEGC-NPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSI 389
Query: 237 CKKGELEE------AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
C EL A+K EM+ C N++ LC G+ D+A ++ M
Sbjct: 390 CSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRK 449
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
GF + ST+ ++ LC K ++A + + + PDV +Y ++I+ FCK+G ++A
Sbjct: 450 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQA 509
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
S EM + G P+V ++ A+ ++ ++ +A + +M C PN ++Y+ ++ G
Sbjct: 510 RSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDG 569
Query: 411 LCMA--------------------------------------------------KGRMQD 420
LC A ++ D
Sbjct: 570 LCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVD 629
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRV 480
++L+D M +G + +Y L+ G+C+ G ++N ++ M +K G L + + T +
Sbjct: 630 AQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRM-SKCGYLPTVHTY-TSL 687
Query: 481 VDALL 485
+DA+
Sbjct: 688 IDAMF 692
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/537 (21%), Positives = 206/537 (38%), Gaps = 85/537 (15%)
Query: 53 LGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAA 112
L +V V+ P + FF WA Y HT CY A+ +VL
Sbjct: 102 LNDAVVVAVLRSVRTPELCVRFFLWAERQV----GYSHTGACYNALAEVLHFDDRARTTE 157
Query: 113 SLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
LL+ + ++ ++ +++ G A+ + K +YN+L+ VL
Sbjct: 158 RLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVL 217
Query: 169 VRVNSIKLAEE-------------------FFHQIVKENVVPP------------DVSTY 197
+ + F + KE D
Sbjct: 218 ATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLC 277
Query: 198 TTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T MI G + + + A M + PN++ Y T++ GF KK +L K+ ++ MMN
Sbjct: 278 TQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMN 337
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG----------FKDNVST------ 298
GC PN +N++++ C A L+ +M G F ++ +
Sbjct: 338 EGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPS 397
Query: 299 ----------HKSML---------------KGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
++ ML + LC +GKFD+A ++ +M PD +
Sbjct: 398 PDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTST 457
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y VI C+ K ++A L +EM++ G+ P V+++ + + G +++A +M
Sbjct: 458 YSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEME 517
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ C P+ V+Y ++ K ++ D+ RM+ +G + YS L+ G C+ G
Sbjct: 518 SVGCSPSVVTYTALLHAYLKTK-QVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGES 576
Query: 454 ENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVVIME 510
+ ++ +M+ + F D++ +VT G+ I H+VV E
Sbjct: 577 QKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPN-VVTYGALIDGLCKAHKVVDAQE 632
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI G G V ++ F Q +Y L+ + A ++ K
Sbjct: 755 TSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM-K 813
Query: 187 ENVVPPDVSTYTTMIRGYCK-----MGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGE 241
+ P V Y ++++G+ K +G++E + ++++ P Y +I+ F K G
Sbjct: 814 QTYWPKYVQGYCSVVQGFSKKFIASLGLLEELES-HGMVSIAP---VYGLLIDSFSKAGR 869
Query: 242 LEEAKKCMNEMMNRGCRPN---ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
LE+A + EMM N + TY ++I LC+ ++++A L +++ G +S
Sbjct: 870 LEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSA 929
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
++KGL V K+++A+ ++ + +N
Sbjct: 930 FICLIKGLIKVNKWNEALQLCYSMCDEGVN 959
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 159/285 (55%), Gaps = 4/285 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y GN+ H ++ +++Y++L+ L + N + A F+++ +
Sbjct: 281 LINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERG 340
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
++P DV +TT+I G+ + G I+ K+ + M K P+++ YNT++NGFCK G+L A
Sbjct: 341 LIPNDV-IFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ M+ RG RP+++TY +I G C G VD A + +M NG + + +++ G
Sbjct: 400 RNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICG 459
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+C G+ A LR ++ A M PD +Y ++++ FCK G + LLKEM++ G P
Sbjct: 460 MCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPN 519
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
V ++N + L + G++ A +LL M + +P+ ++YNT++ G
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEG 564
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 202/422 (47%), Gaps = 33/422 (7%)
Query: 68 PYHALF-FFNW-ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL--------KN 117
P+ ++F FF + +S P ++ T Y + L H + A SL+ KN
Sbjct: 97 PHRSIFAFFKFISSQP-----EFRFTVETYFVMARFLAIHEMFVEAQSLIELVVSRKGKN 151
Query: 118 S-------------NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL 164
S + DF + L+ Y D G + I F +++ + +L
Sbjct: 152 SASSVFISLVEMRGTPMCDFLVDALMITYMDLGFIPDVIQCFRLSRKHNFVVPIRGCGNL 211
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--- 221
L ++++N F+ +I+ P +V + ++ +CK G I +A+KVFD +T
Sbjct: 212 LDRMMKLNPTGTVWGFYMEILDAGF-PLNVYVFNILMNKFCKEGNICDAQKVFDEITKRS 270
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++P ++++NT+ING+CK G L+ + + M RP+ TY+A+I LC ++D A
Sbjct: 271 LRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L +M G N +++ G G+ D + ++ + PD+ Y ++NGF
Sbjct: 331 RLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK G A +++ M RGL+P ++ + G++D A+ + K+M Q +
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDR 450
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
V ++ +ICG+C +GR+ D E + M+R+G D Y+ ++ +C++G+ + ++
Sbjct: 451 VGFSALICGMC-KEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509
Query: 462 EM 463
EM
Sbjct: 510 EM 511
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 164/328 (50%), Gaps = 5/328 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + GN+ A F + + + S+N+L+ +V ++ + H + K
Sbjct: 246 LMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSR 305
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
PDV TY+ +I CK ++ A ++F M + PN + + T+I+G + G+++
Sbjct: 306 T-RPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLM 364
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K+ +M+++G +P+ + YN ++ G C NG + A+ ++ M G + + T+ +++ G
Sbjct: 365 KESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDG 424
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G D A+ + + + + D + +I G CK G+ +A L+EM G+KP
Sbjct: 425 FCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPD 484
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++ + + G+ LLK+M +PN V+YN ++ GLC G+M++ + L+
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKL-GQMKNADMLL 543
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
D M+ G D Y+ LL+G+ N
Sbjct: 544 DAMLNVGVVPDDITYNTLLEGHHRHANA 571
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 169/307 (55%), Gaps = 5/307 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+++++ L + I A + ++ V P+V TY ++ G+C ++ A KVFD M
Sbjct: 280 FSTVVDALCKEGKITEAHDVVDMMIIRGV-EPNVVTYNALMDGHCLQSEMDEAVKVFDTM 338
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
PN+++YNT+ING+CK +++A EM + PN +TYN +++GLC GR+
Sbjct: 339 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRL 398
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A L +M +G +++T++ +L LC D+A+ L+ + +NM+PD++ Y +V
Sbjct: 399 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 458
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G C+ G+ + A + + ++GL+P V ++ + L G LD A L +M C
Sbjct: 459 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 518
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ +YNTI GL K ++ ++ L+ M+ G + D + + L++ C++ ++V
Sbjct: 519 SPDGCTYNTITQGLLQNKEALRAIQ-LLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVK 577
Query: 458 QIAHEMV 464
QI E V
Sbjct: 578 QILSEFV 584
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 166/340 (48%), Gaps = 40/340 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ N L+ +N A +I+K + PD +T+TT+IRG C G I +A +F
Sbjct: 102 VYTLNILINSFCHLNRPGFAFSVLAKILKLGL-QPDTATFTTLIRGLCVEGKIGDALHLF 160
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +PN++ Y T+ING CK G A + + M C+P+ + Y ++I LC +
Sbjct: 161 DKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKD 220
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+V EA L +KM G ++ T+ S++ LC + ++ L ++ + + PDV +
Sbjct: 221 RQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIF 280
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA----------------VFRILVE 378
V++ CK GK EA ++ M RG++P V ++NA VF +V
Sbjct: 281 STVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 340
Query: 379 NG-------------------ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
NG +D+A L ++M Q + +PN V+YNT++ GLC GR+Q
Sbjct: 341 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV-GRLQ 399
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
D L M+ G D Y LL C++ +++ M +
Sbjct: 400 DAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMAL 439
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 173/341 (50%), Gaps = 11/341 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI GN AAI + +E G C + Y S++ L + + A F ++V
Sbjct: 178 LINGLCKVGNTNAAIRLL---RSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 234
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ + PD+ TYT++I C + ++ + + M + P+++ ++T+++ CK+G++
Sbjct: 235 GQGI-SPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKI 293
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA ++ M+ RG PN +TYNA++ G C+ +DEA + M NG+ NV ++ ++
Sbjct: 294 TEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTL 353
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G C + + D+A + + + P+ +Y +++G C +G+ +AI+L EM A G
Sbjct: 354 INGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQ 413
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P + ++ + L + LD A+ LLK + + P+ Y +I G+C A G ++
Sbjct: 414 IPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA-GELEAAR 472
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D+ + G + Y+ ++ G C G ++ ++ EM
Sbjct: 473 DIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 513
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 1/247 (0%)
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
D + P++ N +IN FC A + +++ G +P+ T+ +I GLC+ G++
Sbjct: 94 DSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKI 153
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A L KM GF+ NV T+ +++ GLC VG + A+ LR++ + N PDV Y +
Sbjct: 154 GDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSI 213
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ CK + EA +L +M +G+ P +F++ ++ L E LL QM
Sbjct: 214 IDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKI 273
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ V ++T++ LC +G++ + D+VD MI G + Y+ L+ G+C + ++ +
Sbjct: 274 MPDVVIFSTVVDALC-KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 332
Query: 458 QIAHEMV 464
++ MV
Sbjct: 333 KVFDTMV 339
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y + A + F + Q E +YN+L+ L V ++ A FH++V
Sbjct: 353 LINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHG 412
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAK---KVFDVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ PD++TY ++ CK ++ A K + + P++ Y +I+G C+ GELE A
Sbjct: 413 QI-PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAA 471
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + + ++G RPN TY MI GLC G +DEA L +M NG + T+ ++ +G
Sbjct: 472 RDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQG 531
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
L + +A+ L+ ++ + DV + +++ C K D+++
Sbjct: 532 LLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD-DKLDQSV 576
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 114/243 (46%), Gaps = 3/243 (1%)
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L++A N M++ P+ + +N ++ + + L +M G +V T
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ C + + A L +++ + PD ++ +I G C GK +A+ L +M G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+P V ++ + L + G + AI LL+ M Q +C P+ V Y +II LC + ++ +
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDR-QVTEA 226
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVV 481
+L +M+ G + D Y+ L+ C ++V + ++M+ K ++ + VV
Sbjct: 227 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK--IMPDVVIFSTVV 284
Query: 482 DAL 484
DAL
Sbjct: 285 DAL 287
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 193/414 (46%), Gaps = 10/414 (2%)
Query: 66 TNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA----ASLLKNSNKL 121
+ P A+ FN A++ P T+ Y + D +A LL+ ++
Sbjct: 87 SGPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRV 146
Query: 122 SDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
S L+K + + A+ H+ ++ ++SYN LL L A++
Sbjct: 147 DAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDL 206
Query: 181 FHQIVKENVV-PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
+ + V PDV Y T+I G+ K G + A +F M + P+L+ Y+++++
Sbjct: 207 LRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHAL 266
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
CK +++A+ + +M+N+G P+ TYN +IYG G+ EA + +MR +V
Sbjct: 267 CKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDV 326
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
+++ LC GK +A + NPDV SY +++NG+ G + L
Sbjct: 327 VALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDL 386
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M G+ P +++FN + + G LD+A+++ +M P+ V+Y T+I LC G
Sbjct: 387 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRI-G 445
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+M D + ++MI G D Y CL++G+C G++ ++ E++ RL
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRL 499
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 184/380 (48%), Gaps = 43/380 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N L+ + A F+++ +++ V P V TY T+I C++G +++A + F
Sbjct: 396 IYTFNVLIKAYANCGMLDKAMIIFNEM-RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKF 454
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M V P+ AY+ +I GFC G L +AK+ ++E+MN G R + + + ++I LC
Sbjct: 455 NQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKL 514
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GRV +A+ + G + + ++ G C+VGK ++A+ ++ A + P+V Y
Sbjct: 515 GRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 574
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE------------- 381
++NG+CKIG+ DE +SL +EM +G+KP+ +N + L E G
Sbjct: 575 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 634
Query: 382 ----------------------LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
D AI L K++ M+ + ++ NT+I G+ + R++
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR-RVE 693
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTR 479
+ +DL + RSG YS ++ +EG VE + M + L
Sbjct: 694 EAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSM--QNAGCEPDSRLLNH 751
Query: 480 VVDALLLM-WIVTGGSWISR 498
VV LL IV G+++S+
Sbjct: 752 VVRELLKKNEIVRAGAYLSK 771
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 174/375 (46%), Gaps = 38/375 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I + G+V A F + Q L +Y+S++ L + ++ AE F Q+V +
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286
Query: 189 VVP----------------------------------PDVSTYTTMIRGYCKMGMIENAK 214
V+P PDV T++ CK G I+ A+
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
VFD M +K P++ +Y M+NG+ KG L + + M+ G P+ T+N +I
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 406
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
G +D+A ++ +MR +G K +V T+ +++ LC +GK D A+ +++ + PD
Sbjct: 407 ANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDK 466
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I GFC G +A L+ E+ G++ + F ++ L + G + A +
Sbjct: 467 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDL 526
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ P+ V YN ++ G C+ G+M+ + D M+ +G + Y L+ GYC+ G
Sbjct: 527 TVNVGLHPDAVVYNMLMDGYCLV-GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 585
Query: 452 NVENVMQIAHEMVTK 466
++ + + EM+ K
Sbjct: 586 RIDEGLSLFREMLQK 600
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 138/315 (43%), Gaps = 7/315 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P+ YH + +L + LIS ++ N +L F +I G V A
Sbjct: 464 PDKYAYHCLIQGFCTHGSLLKAKELIS---EIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
F + YN L+ V ++ A F +V + P+V Y T++
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI-EPNVVGYGTLVN 579
Query: 203 GYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
GYCK+G I+ +F M +KP+ + YN +I+G + G AK +EM G
Sbjct: 580 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 639
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N+ TY+ ++ GL N DEA L ++R K ++ T +M+ G+ + ++A
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
++ + + P +Y ++I K G +EA + M+ G +P N V R L++
Sbjct: 700 ASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKK 759
Query: 380 GELDRAILLLKQMPQ 394
E+ RA L ++ +
Sbjct: 760 NEIVRAGAYLSKIDE 774
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 4/229 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G + + F + Q YN ++ L A+ FH++ E+
Sbjct: 577 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT-ES 635
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
+ + TY+ ++RG K + A +F M VK +++ NTMI G + +EEA
Sbjct: 636 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 695
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + G P +TY+ MI L G V+EA+ + + M+ G + + +++
Sbjct: 696 KDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRE 755
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
L + +A YL + E N + + + ++++ F G E I L
Sbjct: 756 LLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 191/388 (49%), Gaps = 25/388 (6%)
Query: 86 NKYHHTTPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKA 141
N + T Y+ + L + S + A L +K + + D + + LI + G +K
Sbjct: 483 NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQ 542
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A W + + + +Y +L+ ++ + +A E F ++ + P +V TYT +I
Sbjct: 543 AHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP-NVITYTALI 601
Query: 202 RGYCKMGMIENAKKVFDVM-------------------TVKPNLLAYNTMINGFCKKGEL 242
GYCK G IE A +++ M KPN++ Y +++G CK ++
Sbjct: 602 DGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKV 661
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A+ + M GC PN + Y+A+I G C ++DEA+ + KM G+ NV T+ S+
Sbjct: 662 KDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSL 721
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ L + D + L ++E + P++ Y +I+G K+ K+DEA L+ M +G
Sbjct: 722 IDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGC 781
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KP V ++ A+ + G++D+ + L ++M C PNFV+Y T++ C A G + +
Sbjct: 782 KPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY-TVLINHCCATGHLDEAY 840
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
L++ M ++ + Y +++GY E
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKRE 868
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 159/362 (43%), Gaps = 71/362 (19%)
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--- 221
LG R+ S+ +AE + P + + +++ YCK A K+ M
Sbjct: 359 LGRCKRILSMMIAEGCY----------PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCE 408
Query: 222 VKPNLLAYNTMINGFCKKGEL------EEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
KP + YN +I C GEL E A+K NEM++ G N++ + LC G
Sbjct: 409 CKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFG 468
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ ++A ++ +M NGF + ST+ ++ LC + + A + + + PDV +Y
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF----------------NAVFRILV-- 377
++I+ F K G +A + L EM G +PTV ++ N +F +++
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588
Query: 378 -----------------ENGELDRAILLLKQM------PQMDCL----------PNFVSY 404
++G +++A + +M P +D PN V+Y
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
++ GLC A +++D DL++ M G + +Y L+ G+C+ ++ ++ H+MV
Sbjct: 649 GALVDGLCKAH-KVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707
Query: 465 TK 466
+
Sbjct: 708 ER 709
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 170/364 (46%), Gaps = 18/364 (4%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----NSNKLSDFFISKL 129
+F +N PN Y A+ D L + A LL+ + + + L
Sbjct: 632 YFKIKNNVAEKPN-----VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDAL 686
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
I + + A FH+ + +Y+Y+SL+ L + + L + +++ EN
Sbjct: 687 IDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKML-ENS 745
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
P++ YT MI G K+ + A K+ +M KPN++ Y MI+GF K G++++
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ EM ++GC PN +TY +I C G +DEA L+ +M+ + +VS++ +++G
Sbjct: 806 ELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY 865
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
+F ++G L V + P + Y+V+I+ F K G+ + A+ L KE+ + + T
Sbjct: 866 --KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTA 923
Query: 367 FS--FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ ++ ++D A L M + +P+ ++ ++ GL + R ++ L
Sbjct: 924 KKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVR-RWEEALQL 982
Query: 425 VDRM 428
D +
Sbjct: 983 SDSL 986
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 180/468 (38%), Gaps = 55/468 (11%)
Query: 46 LDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSH 105
L QF L ++V +++ +P + FF WA Y HT Y A+ DV
Sbjct: 129 LRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQI----GYDHTPAVYIALLDVFERG 184
Query: 106 SLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSY 161
S + L+ + ++ ++ LI+ G A+ + K +Y
Sbjct: 185 SYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTY 244
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N+L+ V +R + + A+ H+ + E + D T + CK+G A + +
Sbjct: 245 NALVQVFLRADKLDTAQ-LVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKED 303
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR-VDEA 280
PN + YN MI+G C+ EEA +N M + C PN TY ++ G C+N + +
Sbjct: 304 FVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCG-CLNKKQLGRC 362
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
K +++ M G + + S++ C F A L+ + + P Y ++I
Sbjct: 363 KRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGS 422
Query: 341 FCK-----------------------------------------IGKSDEAISLLKEMRA 359
C GK ++A ++ EM
Sbjct: 423 ICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMG 482
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-GRM 418
G P +++ V L ++ A L K+M +P+ +Y +I C +K G +
Sbjct: 483 NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILI--DCFSKAGII 540
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + +D M+R G Y+ L+ Y + V ++ M+ K
Sbjct: 541 KQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 180/378 (47%), Gaps = 43/378 (11%)
Query: 147 HQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
H +++ N CL ++YN+++ +++ ++ A E V + VP D TY ++I G
Sbjct: 279 HYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVP-DQVTYCSLING 337
Query: 204 YCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
C G +E A ++F+ +KP+++ YN+++ G C +G + A + MNEM GC P+
Sbjct: 338 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 397
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
TYN +I GLC G + +A ++M + G+ +V T +++ G C K D A+ +
Sbjct: 398 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 457
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ E + PD +Y V+NG CK GK +E +EM +G P ++N + +
Sbjct: 458 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 517
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM--------------------------- 413
+++ A ++ +M Q P+ VS+NT+I G C
Sbjct: 518 KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 577
Query: 414 -------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
K M E + D M+ GH D Y L+ G C+ NV+ EM+ K
Sbjct: 578 TLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI-K 636
Query: 467 KGRLLKLKNFLTRVVDAL 484
KG + + F RV+++L
Sbjct: 637 KGFIPSMSTF-GRVINSL 653
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 179/340 (52%), Gaps = 6/340 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+K++ A RG+V A + Q L++YN + L + A +
Sbjct: 193 NKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRA 252
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
V PDV TY T+IRG CK M + A M + P+ YNT+I+G+CK ++
Sbjct: 253 YAV--PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 310
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + + + + +G P+++TY ++I GLC G V+ A L + + G K ++ + S++
Sbjct: 311 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 370
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
KGLC+ G A+ + + E +PD+++Y +VING CK+G +A ++ + +G
Sbjct: 371 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 430
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P VF+FN + + +LD A+ L+++M + P+ ++YN+++ GLC A G++ +V +
Sbjct: 431 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA-GKVNEVNE 489
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
MI G + + Y+ L++ +C +E ++ +M
Sbjct: 490 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 529
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 185/381 (48%), Gaps = 9/381 (2%)
Query: 91 TTPCYTAITDVLLSHS-LISIAASLLKNSNKLSDFFISKL----IKAYGDRGNVKAAIFW 145
T P Y A+ L S + ++ A++ ++LS I L I+AY G ++ A+
Sbjct: 16 TVPAYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDA 75
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
F + +YN+++ LV A + + +++ V PD+ T+T +R +C
Sbjct: 76 FERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV-SPDLHTHTIRLRSFC 134
Query: 206 KMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
A ++ + + +AY T++ G G +A++ ++M++ PN +N
Sbjct: 135 LTARPHIALRLLRALPHR-GAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFN 193
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+++ LC G V EA +L+ K+ G N+ T+ ++GLC G+ +AV L + M A
Sbjct: 194 KVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV-RLVDGMRA 252
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
PDV +Y +I G CK EA+ L+ M +G P F++N + + + A
Sbjct: 253 YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEA 312
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
LLK +P+ V+Y ++I GLC A+G ++ +L + G D +Y+ L+K
Sbjct: 313 TELLKDAVFKGFVPDQVTYCSLINGLC-AEGDVERALELFNEAQAKGIKPDIVVYNSLVK 371
Query: 446 GYCEEGNVENVMQIAHEMVTK 466
G C +G + + +Q+ +EM +
Sbjct: 372 GLCLQGLILHALQVMNEMAEE 392
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/499 (23%), Positives = 202/499 (40%), Gaps = 103/499 (20%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
N + + + +++ P A+ + N P+ + Y I D S++ A LL
Sbjct: 262 NTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF-----TYNTIIDGYCKISMVQEATELL 316
Query: 116 KNSNKLSDFFISK-----LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVR 170
K++ F + LI G+V+ A+ F++A+ + YNSL+ L
Sbjct: 317 KDA-VFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF----------DVM 220
I A + +++ +E PD+ TY +I G CKMG I +A V DV
Sbjct: 376 QGLILHALQVMNEMAEEGC-HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 434
Query: 221 T----------------------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
T + P+ + YN+++NG CK G++ E + EM
Sbjct: 435 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 494
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ +GC PN +TYN +I C + +++EA ++ KM G + + +++ G C G
Sbjct: 495 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 554
Query: 313 DQAV---------GY--------------------------LRNVMEANMNPDVKSYEVV 337
+ A GY ++ D +Y V+
Sbjct: 555 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVL 614
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G CK D A L EM +G P++ +F V L N + +A+ ++ M ++
Sbjct: 615 IDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGV 674
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P V +TI L K + + LV+ +++ GH + + Y L +G
Sbjct: 675 VPEVV--DTI---LNADKKEIAAPKILVEDLMKKGH-ISYPTYEVLHEG----------- 717
Query: 458 QIAHEMVTKKGRLLKLKNF 476
+ +T+K R+L L N
Sbjct: 718 -VRDNKLTRKHRMLLLNNL 735
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 173/323 (53%), Gaps = 16/323 (4%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YN ++ AE+ +++ N+ PDV T++ +I + K G + A++++
Sbjct: 115 VLTYNCMIDGYCSYGKWSDAEQLLRDMIERNI-DPDVVTFSALINAFVKEGKVSGAEELY 173
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI------ 268
M + P + Y++MI+GFCK LE+AK + M+++GC P+ +T N +I
Sbjct: 174 REMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRA 233
Query: 269 -----YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
+G C G V+ A+ L +M NG ++ T ++L GLC GK ++A+ +
Sbjct: 234 KRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQ 293
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
++ M+ D + ++ING CK K DEA L + G++ V ++N + + V+ G
Sbjct: 294 KSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFL 353
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
RA + +M +P+ V+YN+++ G C + R+++ +VD M+ G + D +S L
Sbjct: 354 RAEDIYLEMLCKGIIPSTVTYNSMVDGFC-KQNRLEEARQMVDSMVSEGCSPDVVTFSTL 412
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+KGYC+ G V++ +++ EM +
Sbjct: 413 IKGYCKAGRVDDGLELFSEMCQR 435
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 169/320 (52%), Gaps = 16/320 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ V+ + AEE + ++++ N+ P + TY++MI G+CK +E+AK +FD+
Sbjct: 152 TFSALINAFVKEGKVSGAEELYREMLRRNIFPTTI-TYSSMIDGFCKHSRLEDAKHMFDL 210
Query: 220 MTVK---PNLLAYNTMING-----------FCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
M K P+++ NT+I+G FC+ G + A+ EM++ G P+ +T N
Sbjct: 211 MVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCN 270
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
++ GLC NG++++A + + + + +T ++ G+C K D+A ++
Sbjct: 271 TLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVN 330
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ DV +Y ++I F K G A + EM +G+ P+ ++N++ + L+ A
Sbjct: 331 GVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEA 390
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
++ M C P+ V+++T+I G C A GR+ D +L M + G D Y+ L+
Sbjct: 391 RQMVDSMVSEGCSPDVVTFSTLIKGYCKA-GRVDDGLELFSEMCQRGLVADTITYNALIH 449
Query: 446 GYCEEGNVENVMQIAHEMVT 465
G+C+ G++ I EMV+
Sbjct: 450 GFCKVGDLNGAQDIFEEMVS 469
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 146/286 (51%), Gaps = 13/286 (4%)
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELE 243
E P +V T+TT++ G C+ G + A + D M +P+ + Y T++NG CK G+
Sbjct: 3 ETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTV 62
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + +M + N + Y+A++ LC +G +A+ + +M G NV T+ M+
Sbjct: 63 SALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMI 122
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C GK+ A LR+++E N++PDV ++ +IN F K GK A L +EM R +
Sbjct: 123 DGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF 182
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-------- 415
PT +++++ ++ L+ A + M C P+ ++ NT+I G C AK
Sbjct: 183 PTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFC 242
Query: 416 --GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
G + +DL MI +G + D + LL G CE G +E +++
Sbjct: 243 QVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEM 288
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 156/331 (47%), Gaps = 37/331 (11%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISK---------------------- 128
TT Y+++ D HS L+++ + D +SK
Sbjct: 184 TTITYSSMIDGFCKHSR-------LEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRH 236
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI + GNV A F + I NG + + N+LL L ++ A E F ++ +
Sbjct: 237 LIHGFCQVGNVNVAQDLFQE--MISNGVSPDIVTCNTLLAGLCENGKLEKALEMF-KVFQ 293
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELE 243
++ + D +T +I G CK ++ A +F+ V V+ +++ YN +I F K+G
Sbjct: 294 KSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFL 353
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A+ EM+ +G P+ +TYN+M+ G C R++EA+ ++ M G +V T +++
Sbjct: 354 RAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLI 413
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
KG C G+ D + + + + D +Y +I+GFCK+G + A + +EM + G+
Sbjct: 414 KGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVC 473
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
P +F ++ L EL + + +L+ + +
Sbjct: 474 PDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 47/260 (18%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ GC N +T+ ++ GLC GRV +A L+ +M G + + T+ +++ G+C +G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 312 FDQAVGYLRNVMEANMN-----------------------------------PDVKSYEV 336
A+ LR + E+ + P+V +Y
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+C GK +A LL++M R + P V +F+A+ V+ G++ A L ++M + +
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK----------- 445
P ++Y+++I G C R++D + + D M+ G + D + L+
Sbjct: 181 IFPTTITYSSMIDGFC-KHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIH 239
Query: 446 GYCEEGNVENVMQIAHEMVT 465
G+C+ GNV + EM++
Sbjct: 240 GFCQVGNVNVAQDLFQEMIS 259
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LIK Y G V + F + Q A +YN+L+ +V + A++ F ++V
Sbjct: 410 STLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVS 469
Query: 187 ENVVPPDVSTYTTMIRGYCK-------MGMIENAKKVFD 218
V PD T+ +M+ G C + M+E+ +K D
Sbjct: 470 SGVC-PDTITFRSMLAGLCTKAELQKGLTMLEDLQKSVD 507
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 172/340 (50%), Gaps = 6/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I + ++G V A ++F + Q+ L +++SL+ L ++ SIK A E ++V++
Sbjct: 269 MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGELEE 244
P+V T+T +I G CK G E A ++F + KPN+ Y MING+CK+ +L
Sbjct: 329 W-KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNR 387
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A+ + M +G PN TY +I G C G A LM M GF N+ T+ +++
Sbjct: 388 AEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIID 447
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC G+F +A LR +++ ++ D +Y ++I+ FC+ + +A+++ M GL+P
Sbjct: 448 GLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQP 507
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ ++N + +++ + L ++ + LP +Y ++ICG C G +
Sbjct: 508 DMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYC-RDGHISSAIKF 566
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+M G D Y L+ G C E ++ Q+ M+
Sbjct: 567 FHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMI 606
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 194/400 (48%), Gaps = 27/400 (6%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLI 130
+L FFNW +K+ H Y L++ + A +++ ++
Sbjct: 121 SLSFFNWV----IGFSKFRHFMRLYIVCATTFLNNDNLDRATEVMQC-----------MV 165
Query: 131 KAYGDRGNVKAAIFWFHQAKQIENGACLYS---YNSLLGVLVRVNSIKLAEEFFHQIVKE 187
+++ + G +K A+ + +++N + N ++ V + + + AE+ F +++
Sbjct: 166 RSFSEIGKLKEAV---NMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDR 222
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNT---MINGFCKKGELEE 244
VVP D ++Y M+ GYC+MG I + + M + + T MI+ F +KG +
Sbjct: 223 AVVP-DSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNR 281
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + + G PN + ++++I GLC G + +A ++ +M G+K NV TH +++
Sbjct: 282 AFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALID 341
Query: 305 GLCVVGKFDQAVG-YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GLC G ++A +L+ V N P+V +Y +ING+CK K + A LL M+ +GL
Sbjct: 342 GLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLV 401
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P ++ + + G RA L+ M + PN +YN II GLC KGR +
Sbjct: 402 PNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLC-KKGRFPEAYK 460
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L+ R ++SG + D Y+ L+ +C + + + + I M
Sbjct: 461 LLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRM 500
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 140/275 (50%), Gaps = 10/275 (3%)
Query: 200 MIRGYCKMGMIENAKKVFDVM-----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
M+R + ++G ++ A + M +K +L N +I+ G ++ A+K +EM++
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARIL--NFVIDVALALGFVDYAEKVFDEMLD 221
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
R P+ +Y M+ G C GR+ + + M G+ + +T M+ G ++
Sbjct: 222 RAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNR 281
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A Y + ++ +NP++ ++ +ING CKIG +A +L+EM +G KP V++ A+
Sbjct: 282 AFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALID 341
Query: 375 ILVENGELDRAI-LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L + G ++A L LK + + PN +Y +I G C + ++ E L+ RM G
Sbjct: 342 GLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEE-KLNRAEMLLIRMKEQGL 400
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ Y+CL+ G+C+ GN ++ +++ K+G
Sbjct: 401 VPNTNTYTCLIDGHCKAGNFGRAYELM-DLMGKEG 434
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 140/312 (44%), Gaps = 8/312 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y ++ + + AE ++ KE + P+ +TYT +I G+CK G A ++
Sbjct: 369 VYTYTCMINGYCKEEKLNRAEMLLIRM-KEQGLVPNTNTYTCLIDGHCKAGNFGRAYELM 427
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D+M PN+ YN +I+G CKKG EA K + + G +++TY +I C
Sbjct: 428 DLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQ 487
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+A + ++M G + ++ T+ ++ C K +++ + + P ++Y
Sbjct: 488 TDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETY 547
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G+C+ G AI +MR G KP ++ A+ L +LD A L + M
Sbjct: 548 TSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMID 607
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P V+ T+ C +G +++R+ + L + L++ C E V
Sbjct: 608 NGLSPCEVTRVTLAYEYC-KQGDSATAMIILERLEK---KLWIRTVNTLIRKLCSEKKVG 663
Query: 455 NVMQIAHEMVTK 466
H+++ K
Sbjct: 664 VAALFFHKLLDK 675
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/141 (19%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I Y G++ +AI +FH+ + +Y +L+ L + + A + + ++
Sbjct: 548 TSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMID 607
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAK 246
+ P +V T T+ YCK G A + + + K + NT+I C + ++ A
Sbjct: 608 NGLSPCEV-TRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIRKLCSEKKVGVAA 666
Query: 247 KCMNEMMNRGCRPNELTYNAM 267
++++++ + +T A
Sbjct: 667 LFFHKLLDKDLNVDRITLAAF 687
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 212/453 (46%), Gaps = 28/453 (6%)
Query: 22 TSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNP 81
T + + RL P + S L + + L V + + P AL FF W
Sbjct: 63 TKRSQAMARLINTEPWSHELQSS-LAELAPSLSKTTVLQTLQLIRTPAKALHFFRWV--- 118
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAA----SLLKNSN---KLSDFFISKLIKAYG 134
+ H Y + ++L ++ A S+ K S KL D F + LI++YG
Sbjct: 119 --EAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYG 176
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
G + +I F K+I + ++NSLL ++++ +A++ F +++ V PD
Sbjct: 177 WAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDT 236
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
T+ +IRG+C M++ F M+ P+++ YNT+++G C+ G+++ A +
Sbjct: 237 YTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKG 296
Query: 252 MMNRG--CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
M+ + PN +TY +I G C+ + EA L+A+M G K N T+ ++++GLC
Sbjct: 297 MVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEA 356
Query: 310 GKFDQAVGYLRN-VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
K D+ L V + PD + +I C +GK +EA S+ ++M ++P +
Sbjct: 357 QKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSAT 416
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMD-------CLPNFVSYNTIICGLCMAKGRMQDV 421
++ + R L + G+ RA ++ + + C P +YN + LC + G+ +
Sbjct: 417 YSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLC-SNGKTKKA 475
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
E + ++++ G D Y L+ G+C EG E
Sbjct: 476 ERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPE 507
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 155/321 (48%), Gaps = 16/321 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ L + +E +V + PD T T+I+ +C MG +E A VF+
Sbjct: 345 TYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEK 404
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR-------GCRPNELTYNAMIY 269
M+ V+P+ Y+ ++ C++G+ A++ +E+ + GC+P YN M
Sbjct: 405 MSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFE 464
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
LC NG+ +A+ + ++ G +D S +K+++ G C G + L ++ + P
Sbjct: 465 YLCSNGKTKKAERVFRQLMKRGTQDPPS-YKTLILGHCREGTPEAGFDLLVLMLRRDFVP 523
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
D ++Y ++I+G K G A L++M PT F+++ LVE G + L+
Sbjct: 524 DAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLV 583
Query: 390 KQMPQMDCLPNF-VSYNT---IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
K M + N +S +T ++ LC ++ ++ + + ++ + ++D M S ++
Sbjct: 584 KLMLERRIRQNIDLSTHTMEELVSFLCQSR-KLLEAQKMLLFSLEKRQSVDIDMCSTVIS 642
Query: 446 GYCEEGNVENVMQIAHEMVTK 466
G C+ V + +E+V K
Sbjct: 643 GLCKAHKVSEAFALYYELVEK 663
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 18/284 (6%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIE----NGAC---LYSYNSLLGVLVRVNSIKLAEE 179
S L+++ RG+ + A +F + + E + C + +YN + L K AE
Sbjct: 418 SVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAER 477
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGF 236
F Q++K P +Y T+I G+C+ G E + +M + P+ Y MI+G
Sbjct: 478 VFRQLMKRGTQDP--PSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGL 535
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
KKG+ A K + +M+ P +++++ L G E+ L+ M + N+
Sbjct: 536 LKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNI 595
Query: 297 --STH--KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
STH + ++ LC K +A L +E + D+ VI+G CK K EA +
Sbjct: 596 DLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFA 655
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVE-NGELDRAILLLKQMPQM 395
L E+ +G++ + + RI +E G L+ A + K+MP++
Sbjct: 656 LYYELVEKGMQHRL-TCQEDLRISLEAEGRLNEAKFVSKKMPEV 698
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 197/434 (45%), Gaps = 27/434 (6%)
Query: 36 PSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCY 95
P PK ISS F L ++ Q +P AL F N NPNP + ++ CY
Sbjct: 4 PKPKRISS-----FRL-------ASLLRLQEDPKLALHLFQ-HPNSNPNPKPFRYSLLCY 50
Query: 96 ----TAITDVLLSHSLISIAASLLKNSNKL--SDFFISKLIKAYGDRGNVKAAIFWFHQA 149
T + + H + I K +L + +I YG G + A+ F +
Sbjct: 51 DLMITKLGRAKMFHEMEQILLQF-KTQTRLVAKEPLFCNIITFYGRAGLPQNALKMFDEM 109
Query: 150 KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
+ SYN+LL VL+ + E F I + V PD T+ MIRG C G
Sbjct: 110 PLYRCQRTIKSYNTLLNVLMICKEFDVMREHFVNIKRH--VKPDGCTFNIMIRGLCSDGR 167
Query: 210 IENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMN-RGCRPNELTYN 265
+++A KV D M + PN + + T+I G C +L+EA K + M+N G PNE Y
Sbjct: 168 VDDALKVLDEMKNRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYVYA 227
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+I GLC G + A L +M +G K + + + +++ GL VG+ D+ G L +
Sbjct: 228 TLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELK 287
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
D +Y V+INGFCK + A +L EM KP V S+N + L ++G+ A
Sbjct: 288 GCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEA 347
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L + MP+ C P+ VSY + GL A +D ++D M+ G + +
Sbjct: 348 SDLFEDMPRRGCAPDVVSYRIVFDGLSDAM-EFKDAAFILDEMVFKGFAPRSSSICKFIN 406
Query: 446 GYCEEGNVENVMQI 459
C+ G+ + V +
Sbjct: 407 RLCQNGDEDLVWSV 420
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 4/199 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y Y +L+ L V + A ++ ++ V D + Y+T+I G K+G + V
Sbjct: 224 YVYATLIKGLCAVGELSFALRLKEEMERDGV-KVDSAIYSTLISGLFKVGRKDEVFGVLM 282
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M +K + + YN MINGFCK + E A K ++EMM C+P+ ++YN ++ LC +G
Sbjct: 283 EMELKGCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDG 342
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ EA L M G +V +++ + GL +F A L ++ P S
Sbjct: 343 KWSEASDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPRSSSIC 402
Query: 336 VVINGFCKIGKSDEAISLL 354
IN C+ G D S+L
Sbjct: 403 KFINRLCQNGDEDLVWSVL 421
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 158/365 (43%), Gaps = 62/365 (16%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGA----CLYSYNSLLGVLVRVNSIK 175
++S F ++ L++ D K A+ F N L Y+ ++ L R
Sbjct: 8 RISSFRLASLLRLQED---PKLALHLFQHPNSNPNPKPFRYSLLCYDLMITKLGRAKMFH 64
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTM 232
E+ Q + + + +I Y + G+ +NA K+FD M + + + +YNT+
Sbjct: 65 EMEQILLQFKTQTRLVAKEPLFCNIITFYGRAGLPQNALKMFDEMPLYRCQRTIKSYNTL 124
Query: 233 INGF--CKKGELEEAKKCMNEM---MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+N CK+ ++ M E + R +P+ T+N MI GLC +GRVD+A ++ +M
Sbjct: 125 LNVLMICKEFDV------MREHFVNIKRHVKPDGCTFNIMIRGLCSDGRVDDALKVLDEM 178
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAV---GYLRNVMEANMNPDVKSYEVVINGFCKI 344
+ N T +++ GLC+ K +A Y+ NV + P+ Y +I G C +
Sbjct: 179 KNRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNV--HGLCPNEYVYATLIKGLCAV 236
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G+ A+ L +EM G+K +D AI Y
Sbjct: 237 GELSFALRLKEEMERDGVK------------------VDSAI-----------------Y 261
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+T+I GL GR +V ++ M G D Y+ ++ G+C++ + E +I EM+
Sbjct: 262 STLISGL-FKVGRKDEVFGVLMEMELKGCKADTVTYNVMINGFCKDKDFETAYKILDEMM 320
Query: 465 TKKGR 469
+ +
Sbjct: 321 ENRCK 325
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 180/343 (52%), Gaps = 9/343 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + G+V+ + +++ ++ Y++L+ I+ +E F+++++
Sbjct: 203 SALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLR 262
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+NV P+V TY+ ++ CK + A ++ D MT V+P+++AY + +G K G
Sbjct: 263 KNVT-PNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRAS 321
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A K ++ M+ RG PN +TYNA+I GLC GRVD+A ++ M G K +V T+ +++
Sbjct: 322 DAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLV 381
Query: 304 KGLCVVGKFDQAVGYLRNVM--EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
KGLC VGK D+AV L +M E ++ PDV ++ +VI CK + A + M RG
Sbjct: 382 KGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERG 441
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ ++N + + G+L +A+ L K PN +Y +I GLC K +M +
Sbjct: 442 FPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLC--KMQMLSI 499
Query: 422 -EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ L ++ SG + Y+ L+ C E +VE + EM
Sbjct: 500 AKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEM 542
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 161/314 (51%), Gaps = 5/314 (1%)
Query: 157 CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
C S ++L+ V A I+K +V + +++G+C+ G A +
Sbjct: 93 CFTSLSALIESFVNTQKPSFAFGVLGLIMKRGF-HLNVYNFNLLLKGFCQSGDSHKAMDL 151
Query: 217 FDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
F +M + P+ ++YNT+ING CK L EAK+ EM C+PN +T++A+I G C
Sbjct: 152 FCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCK 211
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
NG V+E L+ +M G + +V + +++ G C G ++ ++ N+ P+V +
Sbjct: 212 NGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVT 271
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y ++N CK K EA +L M ++P V ++ + L +NG AI +L M
Sbjct: 272 YSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMV 331
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ PN V+YN II GLC +GR+ D +++ M + G D YS L+KG C G +
Sbjct: 332 KRGEEPNNVTYNAIINGLC-KEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKI 390
Query: 454 ENVMQIAHEMVTKK 467
+ + + + +++K+
Sbjct: 391 DEAVDLLNLLMSKE 404
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 174/362 (48%), Gaps = 9/362 (2%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT + D L + S A +L K + ++ + +I G V A+
Sbjct: 307 YTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMA 366
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV-KENVVPPDVSTYTTMIRGYCKMGM 209
+ + +Y++L+ L V I A + + ++ KE + PDV + +I+ CK
Sbjct: 367 KKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRR 426
Query: 210 IENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+ +AK+V+ M + N++ YN +I+G+ G+L +A + + ++ G PN TY
Sbjct: 427 LRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTV 486
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I GLC + AK L K R +G + VS + +++ LC +QA + + AN
Sbjct: 487 LINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNAN 546
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+PDV S+ ++I+G K G + A LL EM L P +F+ + ++ G+LD A
Sbjct: 547 HDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAA 606
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L ++M +P+ V +++++ G + KG+ + V ++ +M LD + S +L
Sbjct: 607 SLYERMVSCGHVPDAVLFDSLLKGYSL-KGKTEKVVSMLQQMADKDVVLDSKLTSTILAC 665
Query: 447 YC 448
C
Sbjct: 666 LC 667
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 142/328 (43%), Gaps = 41/328 (12%)
Query: 181 FHQIVKE--NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMING 235
FH +++ N +P S+ T+I K ++ V M +V P + + +I
Sbjct: 45 FHHTLQDYPNSIP-SYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIES 103
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
F + A + +M RG N +N ++ G C +G +A L M+ N +
Sbjct: 104 FVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPD 163
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
++ +++ GLC + +A + + P+ ++ +I+GFCK G +E LL+
Sbjct: 164 CVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLE 223
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
EM GL+ VF ++A+ G+++R L +M + + PN V+Y+ ++ LC +
Sbjct: 224 EMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQ 283
Query: 416 ----------------------------------GRMQDVEDLVDRMIRSGHNLDFTMYS 441
GR D ++D M++ G + Y+
Sbjct: 284 KWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYN 343
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKGR 469
++ G C+EG V++ + I E + KKG+
Sbjct: 344 AIINGLCKEGRVDDALGIL-ETMAKKGK 370
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 212/453 (46%), Gaps = 28/453 (6%)
Query: 22 TSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNP 81
T + + RL P + S L + + L V + + P AL FF W
Sbjct: 63 TKRSQAMARLINTEPWSHELQSS-LAELAPSLSKTTVLQTLQLIRTPAKALHFFRWV--- 118
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAA----SLLKNSN---KLSDFFISKLIKAYG 134
+ H Y + ++L ++ A S+ K S KL D F + LI++YG
Sbjct: 119 --EAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYG 176
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
G + +I F K+I + ++NSLL ++++ +A++ F +++ V PD
Sbjct: 177 WAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDT 236
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
T+ +IRG+C M++ F M+ P+++ YNT+++G C+ G+++ A +
Sbjct: 237 YTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKG 296
Query: 252 MMNRG--CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
M+ + PN +TY +I G C+ + EA L+A+M G K N T+ ++++GLC
Sbjct: 297 MVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEA 356
Query: 310 GKFDQAVGYLRN-VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
K D+ L V + PD + +I C +GK +EA S+ ++M ++P +
Sbjct: 357 QKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSAT 416
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMD-------CLPNFVSYNTIICGLCMAKGRMQDV 421
++ + R L + G+ RA ++ + + C P +YN + LC + G+ +
Sbjct: 417 YSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLC-SNGKTKKA 475
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
E + ++++ G D Y L+ G+C EG E
Sbjct: 476 ERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPE 507
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 138/303 (45%), Gaps = 16/303 (5%)
Query: 175 KLAEEF-FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT----------VK 223
KL E F + + E V PD +TY+ ++R C+ G A++ FD + K
Sbjct: 394 KLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCK 453
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P + AYN M C G+ ++A++ ++M RG + + +Y +I G C G + L
Sbjct: 454 PLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDL 512
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ M F + T+ M+ GL G A L +++++ P + ++ +
Sbjct: 513 LVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVE 572
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G + E+ SL+K M R ++ + R+L ++G D+A + + + + L V
Sbjct: 573 KGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYL---VK 629
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ LC ++ ++ + + ++ + ++D M S ++ G C+ V + +E+
Sbjct: 630 MEELVSFLCQSR-KLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYEL 688
Query: 464 VTK 466
V K
Sbjct: 689 VEK 691
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIE----NGAC---LYSYNSLLGVLVRVNSIKLAEE 179
S L+++ RG+ + A +F + + E + C + +YN + L K AE
Sbjct: 418 SVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAER 477
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGF 236
F Q++K P +Y T+I G+C+ G E + +M + P+ Y MI+G
Sbjct: 478 VFRQLMKRGTQDP--PSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGL 535
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
KKG+ A K + +M+ P +++++ L G E+ L+ M + N+
Sbjct: 536 LKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNI 595
Query: 297 --STHKSML--------KGLCVVG---------KFDQAVGYL---RNVMEAN-------- 326
STH L K +G K ++ V +L R ++EA
Sbjct: 596 DLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLE 655
Query: 327 --MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE-NGELD 383
+ D+ VI+G CK K EA +L E+ +G++ + + RI +E G L+
Sbjct: 656 KRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRL-TCQEDLRISLEAEGRLN 714
Query: 384 RAILLLKQMPQM 395
A + K+MP++
Sbjct: 715 EAKFVSKKMPEV 726
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 170/310 (54%), Gaps = 5/310 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ + I+ A++ F ++ K +V + TYT +I G K G+ + ++++ M
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEW-TYTVLIHGLFKNGIKKQGFEMYEKM 259
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V PNL YN ++N CK G ++A K +EM RG N +TYN +I GLC +
Sbjct: 260 QEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKA 319
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA +M +M+ +G N+ T+ +++ G C V K +A+ R++ ++P + +Y ++
Sbjct: 320 NEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++GFCK G + A ++KEM RG+KP+ ++ + + +++AI L M ++
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGL 439
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ +Y+ +I G C+ KGRM + L M+ + +Y+ ++ GYC+EG+ +
Sbjct: 440 TPDVHTYSVLIHGFCI-KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRAL 498
Query: 458 QIAHEMVTKK 467
++ EM K+
Sbjct: 499 RLFREMEEKE 508
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 145/278 (52%), Gaps = 5/278 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L++YN ++ L + K A + F ++ +E V ++ TY T+I G C+ A +V
Sbjct: 268 LHTYNCVMNQLCKDGRTKDAFKVFDEM-RERGVSCNIVTYNTLIGGLCREMKANEANEVM 326
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M + PNL+ YNT+I+GFC +L +A ++ +RG P+ +TYN ++ G C
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKK 386
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G A ++ +M G K + T+ ++ ++A+ ++ E + PDV +Y
Sbjct: 387 GDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTY 446
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+I+GFC G+ +EA L K M + +P +N + + G RA+ L ++M +
Sbjct: 447 SVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEE 506
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ PN SY +I LC + + ++ E LV++MI SG
Sbjct: 507 KELPPNVASYRYMIEVLCKER-KSKEAEGLVEKMIDSG 543
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 135/259 (52%), Gaps = 4/259 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G K A F + ++ + +YN+L+G L R A E Q+ K + + P++ T
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM-KSDGINPNLIT 340
Query: 197 YTTMIRGYC---KMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y T+I G+C K+G + + + P+L+ YN +++GFCKKG+ A K + EM
Sbjct: 341 YNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG +P+++TY +I + +++A L + M G +V T+ ++ G C+ G+ +
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMN 460
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A ++++E P+ Y ++ G+CK G S A+ L +EM + L P V S+ +
Sbjct: 461 EASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMI 520
Query: 374 RILVENGELDRAILLLKQM 392
+L + + A L+++M
Sbjct: 521 EVLCKERKSKEAEGLVEKM 539
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 180/390 (46%), Gaps = 27/390 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN--SNKL-SDFFISKLIKAYGDRGN 138
+PN + + HT + + +LLS +L S A SLL S K+ S FF S
Sbjct: 29 SPNFHGFQHTHESISILLRLLLSGNLYSHAQSLLLQVISGKIQSQFFTSS---------- 78
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPP-----D 193
+ + + +++ + + LY ++ V+ S+ + +F+++V + VP +
Sbjct: 79 --SLLHYLTESETSKTKSRLYEV--IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNN 134
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ T+ + + N K+ V+ V ++ +I G C+ GE+E++ + E+
Sbjct: 135 LLTFVVGSSSFNQWWCFFNESKIKVVLDV----YSFGIVIKGCCEAGEIEKSFDLLVELR 190
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G PN + Y +I G C G +++AK L +M G N T+ ++ GL G
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK 250
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
Q + E + P++ +Y V+N CK G++ +A + EMR RG+ + ++N +
Sbjct: 251 QGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLI 310
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L + + A ++ QM PN ++YNT+I G C + ++ L + G
Sbjct: 311 GGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVR-KLGKALSLCRDLKSRGL 369
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ Y+ L+ G+C++G+ ++ EM
Sbjct: 370 SPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 168/339 (49%), Gaps = 5/339 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIKA ++ AI + ++ +L+ + ++ A Q+V
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAG 276
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P T ++ GYCK G IE D M+ +P+ +N+++NG C+ G ++ A
Sbjct: 277 C-PSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHA 335
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ M+ G P+ TYN++I+GLC G V+EA ++ +M L F N T+ +++
Sbjct: 336 LEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLIST 395
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + ++A R + + PDV ++ +I G C A+ L +EM+ +G P
Sbjct: 396 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPD 455
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
F++N + L G L+ A+ LLK+M C N V+YNT+I G C K R+++ E++
Sbjct: 456 EFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNK-RIEEAEEIF 514
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D M G + + Y+ L+ G C+ VE Q+ +M+
Sbjct: 515 DEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
S+ ++ L+ Y G ++ + + + +++NSL+ L R+ +K A E
Sbjct: 280 SNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEIL 339
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
+++E PD+ TY ++I G CK+G +E A ++ + M ++ PN + YNT+I+ CK
Sbjct: 340 DVMLQEGF-DPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCK 398
Query: 239 KGELEEAKK------------------------CMN-----------EMMNRGCRPNELT 263
+ ++EEA + C+ EM +GC P+E T
Sbjct: 399 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFT 458
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YN +I LC GR++EA L+ +M +G NV T+ +++ G C + ++A +
Sbjct: 459 YNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEME 518
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
++ +V +Y +I+G CK + +EA L+ +M GLKP F++N++ G++
Sbjct: 519 LQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIK 578
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS----GHNLDFTM 439
+A +++ M C P+ V+Y T+I GL A GR++ L R++R+ G L
Sbjct: 579 KAADIVQTMTSNGCEPDSVTYGTLILGLSKA-GRVE----LASRLLRTVQLKGMVLAPQT 633
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ ++K E +++ EM+ K
Sbjct: 634 YNPVIKALFREKRTSEAVRLFREMMEK 660
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 157/320 (49%), Gaps = 11/320 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++NSL+ L N+ +LA E F ++ K PD TY +I C G +E A +
Sbjct: 423 TFNSLIQGLCLTNNHRLAMELFEEM-KTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKE 481
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M N++ YNT+I+GFCK +EEA++ +EM +G N +TYN +I GLC N R
Sbjct: 482 MESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRR 541
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+EA LM +M + G K + T+ S+L C G +A ++ + PD +Y
Sbjct: 542 VEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGT 601
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G K G+ + A LL+ ++ +G+ ++N V + L A+ L ++M +
Sbjct: 602 LILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKG 661
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+Y + GLC G + + D + M G DF+ + L +G C
Sbjct: 662 DPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLC-------A 714
Query: 457 MQIAHEMVTKKGRLLKLKNF 476
+ + ++ R++K NF
Sbjct: 715 LSMEDTLIKLVNRVMKQANF 734
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 131/254 (51%), Gaps = 11/254 (4%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEE 179
+F + LI + RG ++ A+ K++E+ C + +YN+L+ + I+ AEE
Sbjct: 456 EFTYNMLIDSLCSRGRLEEALSLL---KEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEE 512
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGF 236
F ++ + + +V TY T+I G CK +E A ++ D M +KP+ YN+++ F
Sbjct: 513 IFDEMELQG-ISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYF 571
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C+ G++++A + M + GC P+ +TY +I GL GRV+ A L+ ++L G
Sbjct: 572 CRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAP 631
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS-DEAISLLK 355
T+ ++K L + +AV R +ME PD +Y+VV G C G EA+ L
Sbjct: 632 QTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLV 691
Query: 356 EMRARGLKPTVFSF 369
EM +G P SF
Sbjct: 692 EMTDKGFLPDFSSF 705
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 144/308 (46%), Gaps = 34/308 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++YN LL VLV N +KL E IV +V RG
Sbjct: 177 FTYNFLLNVLVDGNKLKLVE-----IVNSRMVS----------RG--------------- 206
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+KP++ +N +I C+ ++ A M EM + G P+E T+ ++ G G ++
Sbjct: 207 ---IKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMN 263
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
A + +M G + T ++ G C G+ ++ + ++ + PD ++ ++
Sbjct: 264 GALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLV 323
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG C+IG A+ +L M G P +F++N++ L + GE++ A+ +L QM D
Sbjct: 324 NGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFS 383
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
PN V+YNT+I LC + ++++ +L + G D ++ L++G C N M+
Sbjct: 384 PNTVTYNTLISTLC-KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAME 442
Query: 459 IAHEMVTK 466
+ EM TK
Sbjct: 443 LFEEMKTK 450
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 144/285 (50%), Gaps = 6/285 (2%)
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
T+ +I Y K + + A V D+M +K + YN ++N +L+ + +
Sbjct: 142 TFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSR 201
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M++RG +P+ T+N +I LC ++ A ++M +M G + T ++++G G
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
+ A+ ++ A + V+++G+CK G+ +E +S + EM G +P F+FN+
Sbjct: 262 MNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNS 321
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L G + A+ +L M Q P+ +YN++I GLC G +++ +++++MI
Sbjct: 322 LVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKL-GEVEEAVEILNQMILR 380
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
+ + Y+ L+ C+E VE ++A ++T KG L + F
Sbjct: 381 DFSPNTVTYNTLISTLCKENQVEEATELAR-VLTSKGILPDVCTF 424
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 215/440 (48%), Gaps = 22/440 (5%)
Query: 41 ISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITD 100
+ S+ + ++S +GS V ++I + + A+ F+ A+ N ++ H T ++ +
Sbjct: 1 MGSKTVIKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQT--FSLMIS 58
Query: 101 VLLSHSLISIAASLL-----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG 155
L+S + +A LL + N D F+S + +AYG A+ F + K+ E
Sbjct: 59 RLVSANHFRLAEELLCRMKEEKCNITEDIFLS-ICRAYGRVHKPLDAVRVFRKMKEYECE 117
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK-MGMIENAK 214
SY ++ +LV N +KLA F+ + ++E +PP V++ +I+ CK G ++ A
Sbjct: 118 PSQKSYITVFAILVGENQLKLALRFY-RYMREMGIPPSVASLNVLIKALCKNSGTMDAAL 176
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++F M + P+ Y T+ING C+ G++ EAK+ EM + C P +TY ++I+GL
Sbjct: 177 RIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGL 236
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C + +D A L+ +M G K NV T+ S++ G C G +A+ L ++ P++
Sbjct: 237 CQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNM 296
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +++G CK GK EA+ +L M+ +GL+P + + + + A L +
Sbjct: 297 ITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDE 356
Query: 392 MPQMDCLPNFVSY-------NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
M PN +++ N ++ GLC L M G ++D + L+
Sbjct: 357 MVLGGISPNRLTWSLHVRIHNIVVQGLCTEHP--NRAFQLYLSMRTRGISIDAKTFDSLV 414
Query: 445 KGYCEEGNVENVMQIAHEMV 464
+C +G++ + EMV
Sbjct: 415 NYFCNKGDLHKAAHLVDEMV 434
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 74/177 (41%)
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
NGF+ + T M+ L F A L + E N + + + ++ K +
Sbjct: 44 NGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLD 103
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A+ + ++M+ +P+ S+ VF ILV +L A+ + M +M P+ S N +I
Sbjct: 104 AVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIK 163
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC G M + M G D Y L+ G C G + ++ EM TK
Sbjct: 164 ALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETK 220
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 70/171 (40%), Gaps = 45/171 (26%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +Y++L+ L + ++ A E ++ K + PD Y +I G+C + A
Sbjct: 296 MITYSTLVHGLCKEGKLQEAVEILDRM-KLQGLRPDAGLYGKIISGFCDICKFHEAANFL 354
Query: 218 DVMT---VKPNLLA-----------------------------------------YNTMI 233
D M + PN L +++++
Sbjct: 355 DEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLV 414
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N FC KG+L +A ++EM+ GC P+E+T+NA++ +V E+ L+
Sbjct: 415 NYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELV 465
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 186/389 (47%), Gaps = 57/389 (14%)
Query: 154 NGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
N C+ ++YN+++ + ++ A E V + VP D TY ++I G C G I
Sbjct: 308 NQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVP-DRVTYCSLINGLCAEGDI 366
Query: 211 ENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
E A ++F+ +KP+L+ YN+++ G C++G + A + MNEM+ GC P+ TYN +
Sbjct: 367 ERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNII 426
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC G + +A ++M + G+ +V T +++ G C K D A+ + + +
Sbjct: 427 INGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGI 486
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELD 383
PDV +Y V+NG CK GK+ E +EM +G +P ++N IL+EN +L+
Sbjct: 487 APDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYN----ILIENFCKINQLE 542
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCM------------------------------ 413
A ++ +M Q +P+ VS+NT+I G C
Sbjct: 543 EASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 602
Query: 414 ----AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK-- 467
+K MQ E + MI G+ D Y L+ G C+ NV+ EM++K
Sbjct: 603 GAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFV 662
Query: 468 ------GRLLKLKNFLTRVVDALLLMWIV 490
GR+L L RV +A+ ++ I+
Sbjct: 663 PSMATFGRMLNLLAMNHRVSEAVAIIHIM 691
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 200/429 (46%), Gaps = 44/429 (10%)
Query: 80 NPNPNPNKYHHTTPCYTAITDVLLSHS-LISIAASLLKNSNKLSDFFISKL----IKAYG 134
+ P+ T P Y A+ L+S L + A+L + L+ + L I+AY
Sbjct: 23 HAEPSSELTASTIPAYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYA 82
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP--- 191
G ++AA+ F + +YN+++ LV A + + +++ V P
Sbjct: 83 RAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDAR 142
Query: 192 --------------PDV-----------------STYTTMIRGYCKMGMIENAKKVFDVM 220
P V + Y T++RG G NA+ +FD M
Sbjct: 143 THTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEM 202
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V P++ +N +++ C+KG++ E+ + +++ RG N+ T N I GLC +GR+
Sbjct: 203 LGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRL 262
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA L+ +M D V T+ ++++GLC K +A YL +M PD +Y +
Sbjct: 263 EEAVALVERMGAYVAPD-VVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTI 321
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G+CK G EA LLK+ +G P ++ ++ L G+++RA+ L + D
Sbjct: 322 IDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDL 381
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ V YN+++ GLC +G + +++ M+ G + D Y+ ++ G C+ GN+ +
Sbjct: 382 KPDLVVYNSLVKGLCR-QGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAA 440
Query: 458 QIAHEMVTK 466
+ ++ + K
Sbjct: 441 VVMNDAIVK 449
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 159/312 (50%), Gaps = 4/312 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N++L L + + + +++K + + T IRG C+ G +E A + +
Sbjct: 213 TFNNVLHALCQKGDVMESGALLAKVLKRGM-SANKFTCNIWIRGLCEDGRLEEAVALVER 271
Query: 220 MT--VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
M V P+++ YNT++ G CK +++EA + + MMN+GC P++ TYN +I G C +G +
Sbjct: 272 MGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGML 331
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L+ GF + T+ S++ GLC G ++A+ ++ PD+ Y +
Sbjct: 332 QEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSL 391
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+ G C+ G A+ ++ EM G P ++++N + L + G + A +++
Sbjct: 392 VKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGY 451
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
LP+ ++NT+I G C + ++ LV+RM G D Y+ +L G C+ G + V
Sbjct: 452 LPDVFTFNTLIDGYC-KRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVN 510
Query: 458 QIAHEMVTKKGR 469
+ EM+ K R
Sbjct: 511 ETFEEMILKGCR 522
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 128/260 (49%), Gaps = 9/260 (3%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
+ PDV TY +++ G CK G + + F+ M +K PN + YN +I FCK +LEEA
Sbjct: 486 IAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 545
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ M G P+ +++N +I+G C NG +D A +L K+ G+ T ++
Sbjct: 546 GVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAY 605
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
A ++ PD+ +Y ++++G CK D A + L EM ++G P++
Sbjct: 606 SSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSM 665
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+F + +L N + A+ ++ M +M +P V +TI L K + + LV+
Sbjct: 666 ATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTI---LSTDKKEIAAPKILVE 720
Query: 427 RMIRSGHNLDFTMYSCLLKG 446
+++ GH + + Y L +G
Sbjct: 721 ELMKKGH-ISYRAYEVLHEG 739
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 181/353 (51%), Gaps = 21/353 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ ++ L +N + A +I+K PD +T+TT+IRG C G I A +F
Sbjct: 105 VYTLAIVINSLCHLNRVDFAFSALAKILKLGH-QPDATTFTTLIRGLCVEGKIGEALHLF 163
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +PN++ Y T+ING CK G A + + M C+PN + ++ +I LC +
Sbjct: 164 DKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKD 223
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+V EA + ++M G N+ T+ S++ GLC + ++ + ++++ + PDV +
Sbjct: 224 RQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 283
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V++ CK G EA ++ M RG++P V ++NA+ E+D A+ + M
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
DC+ N +SYNT+I G C ++Q V+ L + M R + Y+ L+ G C G
Sbjct: 344 KDCVANVISYNTLINGYC----KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVG 399
Query: 452 NVENVMQIAHEMVTKKGRLLKLKNFLT--------RVVD-ALLLMWIVTGGSW 495
+++ + + HEMV +G++ L + T R +D A+ L+ + G +W
Sbjct: 400 RLQDAISLFHEMVA-RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 174/341 (51%), Gaps = 11/341 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI GN AAI + +E G C + +++L+ L + + A F +++
Sbjct: 181 LINGLCKVGNTSAAIRLL---RSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMI 237
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ + P++ TY ++I G CK+ ++ + + M + P++ NT+++ CK+G +
Sbjct: 238 TKGI-SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMV 296
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA ++ M++RG PN +TYNA++ G C+ VD A + M NV ++ ++
Sbjct: 297 AEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTL 356
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G C + D+A+ + + P+ +Y +I+G C +G+ +AISL EM ARG
Sbjct: 357 INGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQ 416
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P + ++ + L +N LD+A+ LLK + + P+ Y TI+ G+C A G ++D
Sbjct: 417 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA-GELEDAR 475
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
DL + G + Y+ ++ G C++G + ++ EM
Sbjct: 476 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++ N+++ L + + A + ++ V P+V TY ++ G+C ++ A KVF
Sbjct: 280 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV-EPNVVTYNALMDGHCLRNEVDVAVKVF 338
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M K N+++YNT+ING+CK +++A EM + PN +TYN +I+GLC
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+ +A L +M G ++ T++++ LC D+A+ L+ + +N +PD++ Y
Sbjct: 399 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 458
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++G C+ G+ ++A L + ++GL+P V+++N + L + G L A L +M +
Sbjct: 459 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C PN +YN I G ++ +E L++ M+ G ++D + + L+ ++G +
Sbjct: 519 NGCSPNDCTYNLITRGFLRNNEALRTIE-LLEEMLARGFSVDVSTTTLLVGMLSDDGLDQ 577
Query: 455 NVMQI 459
+V QI
Sbjct: 578 SVKQI 582
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 155/312 (49%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YNSL+ L ++ K +++V ++P DV T T++ CK GM+ A V
Sbjct: 245 IVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP-DVFTLNTVVDALCKEGMVAEAHDVV 303
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D+M V+PN++ YN +++G C + E++ A K + M+++ C N ++YN +I G C
Sbjct: 304 DMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKI 363
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
VD+A L +M N T+ +++ GLC VG+ A+ ++ PD+ +Y
Sbjct: 364 QSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTY 423
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ + CK D+A++LLK + P + + + + GEL+ A L +
Sbjct: 424 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 483
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN +YN +I GLC +G + + L M ++G + + Y+ + +G+
Sbjct: 484 KGLQPNVWTYNIMIHGLC-KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 542
Query: 455 NVMQIAHEMVTK 466
+++ EM+ +
Sbjct: 543 RTIELLEEMLAR 554
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 153/310 (49%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM---GMIENAKKV 216
S+N+ + N++ A F++++ + PP + ++ K + + +
Sbjct: 37 SHNTFHSKPLHFNTLDEALSTFNRMLHKQP-PPSTVDFNRLLTSIAKTKHHSTLLSLSRQ 95
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
D + P++ +IN C ++ A + +++ G +P+ T+ +I GLC+ G+
Sbjct: 96 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L KM GF+ NV T+ +++ GLC VG A+ LR++ + N P+V +
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ CK + EA ++ EM +G+ P + ++N++ L + E L+ +M
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+P+ + NT++ LC +G + + D+VD MI G + Y+ L+ G+C V+
Sbjct: 276 IMPDVFTLNTVVDALC-KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334
Query: 457 MQIAHEMVTK 466
+++ MV K
Sbjct: 335 VKVFDTMVHK 344
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 38/225 (16%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y +V A++ F + + E +YN+L+ L V ++ A FH++V
Sbjct: 356 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 415
Query: 189 VVP----------------------------------PDVSTYTTMIRGYCKMGMIENAK 214
+P PD+ YTT++ G C+ G +E+A+
Sbjct: 416 QIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDAR 475
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+F ++ K PN+ YN MI+G CK+G L EA K +EM GC PN+ TYN + G
Sbjct: 476 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGF 535
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
N L+ +M GF +VST ++L G+ DQ+V
Sbjct: 536 LRNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDDGLDQSV 579
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y ++L + R ++ A + F + + + P+V TY MI G CK G++ A K+F M
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGL-QPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
PN YN + GF + E + + EM+ RG + T ++ L +G
Sbjct: 517 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLD 576
Query: 278 DEAKMLMAK 286
K ++ K
Sbjct: 577 QSVKQILCK 585
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 181/348 (52%), Gaps = 5/348 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI YG G ++ + ++ A + +YN+L+ + I+ A +F ++ +
Sbjct: 240 LIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLG 299
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
V+ +V T +T + +CK G++ A K+F M V+ PN Y ++++G CK G L++A
Sbjct: 300 VMA-NVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDA 358
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++EM+++G PN +TY M+ GLC G+V A +++ M G K N + +++ G
Sbjct: 359 IVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHG 418
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+ ++A+ L + M DV Y +I G CK+ K DEA SLL +M GL+P
Sbjct: 419 HFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPN 478
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ + + G+ A+ LL ++P PN V+Y +I GLC A G + +
Sbjct: 479 TVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKA-GSIYEAISHF 537
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKL 473
D+M G + + +Y+ L+ G+C+ G++ + + +EMV K L K+
Sbjct: 538 DKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKV 585
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 5/342 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+S + A+ G V+ A+ F Q + ++Y SL+ + + A ++V
Sbjct: 307 LSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 366
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ +VP +V TYT M+ G CK G + A V +M VK N L Y T+I+G
Sbjct: 367 HQGLVP-NVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNS 425
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E A +NEM N+G + Y +I+GLC ++DEAK L+ KM G + N + ++
Sbjct: 426 ERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTI 485
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GK +AV L + ++ + P+V +Y +I+G CK G EAIS +MR GL
Sbjct: 486 MDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGL 545
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P V + + + G L +A+ L+ +M + V Y ++I G M +G +Q
Sbjct: 546 DPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGH-MKQGDLQGAF 604
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L +MI +G LD Y+C + G+C ++ + EM+
Sbjct: 605 ALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI 646
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 150/282 (53%), Gaps = 2/282 (0%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEE 244
V++ VPP+ T ++ + +++F+ + PN+ +N +I+ CK+GEL E
Sbjct: 159 VRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA-PNVFTFNIVIDFLCKQGELVE 217
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A+ M GC P+ +TYN++I G G ++E ++L+++MR +G +V T+ +++
Sbjct: 218 ARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALIN 277
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G ++A Y + + +V + ++ FCK G EA+ L +MR RG+ P
Sbjct: 278 CFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMP 337
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
F++ ++ + G LD AI+LL +M +PN V+Y ++ GLC +G++ +D+
Sbjct: 338 NEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLC-KEGKVAVADDV 396
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M R+G + +Y+ L+ G+ N E + + +EM K
Sbjct: 397 LSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNK 438
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
DVS Y T+I G CK+ ++ AK + M ++PN + Y T+++ F K G+ EA +
Sbjct: 443 DVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALL 502
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+++ + G +PN +TY A+I GLC G + EA KMR G NV + +++ G C +
Sbjct: 503 HKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKI 562
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G +AV + +++ M+ D Y +I+G K G A +L +M GL
Sbjct: 563 GSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGL------- 615
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
Q+D Y I G C MQ+ ++ MI
Sbjct: 616 ------------------------QLD----LYCYTCFISGFC-NMNMMQEARGVLSEMI 646
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+G D T Y+CL++ Y + GN+E + +EM
Sbjct: 647 GTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 4/202 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +++ + A H+I ++ + P+V TY +I G CK G I A FD M
Sbjct: 482 YTTIMDAFFKAGKESEAVALLHKI-PDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKM 540
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN+ Y T+I+GFCK G L +A MNEM+++G +++ Y ++I G G +
Sbjct: 541 RELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDL 600
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A L AKM G + ++ + + G C + +A G L ++ + PD +Y +
Sbjct: 601 QGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCL 660
Query: 338 INGFCKIGKSDEAISLLKEMRA 359
I + K+G +EA SL EM +
Sbjct: 661 IRKYQKLGNMEEASSLQNEMES 682
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 198/407 (48%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----------------------KNSN 119
+P + + HT Y + L +H ++ A SL+ K +
Sbjct: 3 SPTNSTFRHTLHSYCTMIHFLCTHQMLPEAKSLIQIVVSRKGKDSASAVFATILETKGAQ 62
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+ + S LI AY + G ++ AI F ++ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWS 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYKEIL-ECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + + M G +P+ TY+ +I GLC ++DEA L +M G N
Sbjct: 182 IKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C GK D A+ + ++ +PD +Y +I G CK G +A L E
Sbjct: 242 VTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + VSY +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLC-KEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G D Y+ ++ +C+ G+V+ ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEM 407
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 125/219 (57%), Gaps = 14/219 (6%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y+ L+ L + + + A + F +++ +VP V T+TT+I G+CK G ++ A +++
Sbjct: 206 VYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGV-TFTTLIDGHCKNGKLDLAMEIY 264
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + P+ + YNT+I G CKKG+L +AK +EM +G +P+++TY +I G C
Sbjct: 265 KQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKE 324
Query: 275 GRVDEA-----KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G ++ A +M+ +RL D+VS + +++ GLC G+ A LR ++ + P
Sbjct: 325 GDLETAFEYRKRMIKENIRL----DDVS-YTALISGLCKEGRSVDAEKMLREMLSVGLKP 379
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
D +Y +V++ FCK G LLKEM+ G P V +
Sbjct: 380 DTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 173/310 (55%), Gaps = 5/310 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ + I+ A++ F ++ K +V + TYT +I G K G+ + ++++ M
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE-RTYTVLINGLFKNGVKKQGFEMYEKM 259
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V PNL YN ++N CK G ++A + +EM RG N +TYN +I GLC ++
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL 319
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA ++ +M+ +G N+ T+ +++ G C VGK +A+ R++ ++P + +Y ++
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++GFC+ G + A ++KEM RG+KP+ ++ + + +++AI L M ++
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ +Y+ +I G C+ KG+M + L M+ + +Y+ ++ GYC+EG+ +
Sbjct: 440 VPDVHTYSVLIHGFCI-KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 458 QIAHEMVTKK 467
++ EM K+
Sbjct: 499 KLLKEMEEKE 508
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 158/302 (52%), Gaps = 8/302 (2%)
Query: 136 RGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
+ VK F ++ Q E+G LY+YN ++ L + K A + F ++ +E V +
Sbjct: 245 KNGVKKQGFEMYEKMQ-EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM-RERGVSCN 302
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMN 250
+ TY T+I G C+ + A KV D M + PNL+ YNT+I+GFC G+L +A
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
++ +RG P+ +TYN ++ G C G A ++ +M G K + T+ ++
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
++A+ ++ E + PDV +Y V+I+GFC G+ +EA L K M + +P +N
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ + G RA+ LLK+M + + PN SY +I LC + + ++ E LV++MI
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER-KSKEAERLVEKMID 541
Query: 431 SG 432
SG
Sbjct: 542 SG 543
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 39/268 (14%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G K A F + ++ + +YN+L+G L R + A + Q+ K + + P++ T
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM-KSDGINPNLIT 340
Query: 197 YTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y T+I G+C +G + A + + P+L+ YN +++GFC+KG+ A K + EM
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 254 NRGCRPNELTY-----------------------------------NAMIYGLCINGRVD 278
RG +P+++TY + +I+G CI G+++
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EA L M + N + +M+ G C G +A+ L+ + E + P+V SY +I
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTV 366
CK KS EA L+++M G+ P+
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
YEV+IN + + + +IS EM G P FN + +V + ++ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
L + S+ +I G C A G ++ DL+ + G + + +Y+ L+ G C++G +
Sbjct: 157 SKVVL-DVYSFGILIKGCCEA-GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 454 ENVMQIAHEM 463
E + EM
Sbjct: 215 EKAKDLFFEM 224
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 202/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKDSASAVFAAILETRGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ +CK G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L E + N M G +P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G L+ Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEM 407
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 204/407 (50%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + +L +H ++S A SL++ +
Sbjct: 3 SPTNSTFRHTLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + ++ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + ++ +CK G I A+ VF+ +T ++P+++++NT++NG+
Sbjct: 123 FYEEIL-ECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ G+L+E + M G +P+ TY+ +I GLC ++D+A L +M G N
Sbjct: 182 IRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G C+ G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M Q + + V Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 361 RYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 194/425 (45%), Gaps = 59/425 (13%)
Query: 86 NKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGD---------R 136
N +HHT A ++L+ + +I + N L FF+ ++ D R
Sbjct: 4 NPHHHT-----AAANLLVPITTATINTQRV-NLCPLKFFFVRSSSRSVADYNIVLQSLCR 57
Query: 137 GNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
A + + +G + +YN+++ L + N + E F ++VK PDV
Sbjct: 58 AGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRG-HHPDV 116
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNE 251
TY T+I CK G +E A+++ M+ + PN++ Y+ +ING CK G ++EA++ + E
Sbjct: 117 VTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQE 176
Query: 252 MMNRGCR--PNELTYNAMIYGLCINGRVDEAKMLMAKMR--------------------- 288
M + C PN +TYN+ + GLC EA LM +R
Sbjct: 177 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 236
Query: 289 --------------LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+ NV T+ +++ GLC K ++A + ++++ + PDV +Y
Sbjct: 237 KCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 296
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+++ FCK + DEA+ LL M +RG P V +FN++ L ++ A + Q+
Sbjct: 297 SVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYN 356
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+P+ V++N +I G C A G + L + M+ D + L+ G C+ G VE
Sbjct: 357 RMLVPDKVTFNILIAGACKA-GNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVE 415
Query: 455 NVMQI 459
I
Sbjct: 416 AARDI 420
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 170/349 (48%), Gaps = 47/349 (13%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN +L L R A E F + + V P + TY T+I G CK + ++F+ +
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ YNT+I+ CK G+LEEA++ M +RGC PN +TY+ +I GLC GR+
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167
Query: 278 DEAKMLMAKMRLNGFK--DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM--NPDVKS 333
DEA+ L+ +M N+ T+ S L GLC +A +R++ + ++ +PD +
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227
Query: 334 YEVVINGFCKIGKSDEAI---------------------------------SLLKEMRAR 360
+ +I+G CK G++DEA ++++ M +
Sbjct: 228 FSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDK 287
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+ P V +++ + + +D A+ LL M C PN V++N+II GLC + +
Sbjct: 288 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEA 347
Query: 421 VE---DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + +RM+ D ++ L+ G C+ GN E + EMV K
Sbjct: 348 FQIALQVYNRMLVP----DKVTFNILIAGACKAGNFEQASALFEEMVAK 392
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 7/310 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKV 216
+ +YNS L L + + A E + ++ V PD T++T+I G CK G + A
Sbjct: 188 IITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN- 246
Query: 217 FDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
D M PN++ YN ++NG CK ++E A + M+++G P+ +TY+ ++ C
Sbjct: 247 -DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 305
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
RVDEA L+ M G NV T S++ GLC + +A V + PD +
Sbjct: 306 ASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVT 365
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+ ++I G CK G ++A +L +EM A+ ++P V +F A+ L + G+++ A +L M
Sbjct: 366 FNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMG 425
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ PN V+YN ++ GLC + GR+++ + ++ M+ SG + Y L+ C
Sbjct: 426 NLGVPPNVVTYNVLVHGLCKS-GRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRT 484
Query: 454 ENVMQIAHEM 463
++ +Q+ ++
Sbjct: 485 DDALQLVSKL 494
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 150/285 (52%), Gaps = 4/285 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ A+ V A+ H + ++NS++ L + + A + Q+
Sbjct: 297 SVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYN 356
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+VP V T+ +I G CK G E A +F+ M K P+++ + +I+G CK G++E
Sbjct: 357 RMLVPDKV-TFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVE 415
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A+ ++ M N G PN +TYN +++GLC +GR++E + +M +G T+ S++
Sbjct: 416 AARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLV 475
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC + D A+ + + +PD +Y ++++G K GK+++AI++L+EM +G +
Sbjct: 476 YALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQ 535
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
P F+F A F L +G L + LL+ + LP+ + ++I+
Sbjct: 536 PDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 144/281 (51%), Gaps = 11/281 (3%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM----TVKPNLLAYNTMINGFCKKGELEEAKKCM 249
V+ Y +++ C+ G A ++F V P ++ YNT+ING CK EL +
Sbjct: 45 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
E++ RG P+ +TYN +I LC G ++EA+ L M G NV T+ ++ GLC V
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164
Query: 310 GKFDQAVGYLRNVMEANMN--PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK--PT 365
G+ D+A ++ + + + P++ +Y ++G CK + EA L++ +R L+ P
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 224
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+F+ + L + G+ D A M +PN V+YN ++ GLC A +M+ ++
Sbjct: 225 TVTFSTLIDGLCKCGQTDEAC--NDDMIAGGYVPNVVTYNALVNGLCKAD-KMERAHAMI 281
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M+ G D YS L+ +C+ V+ +++ H M ++
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR 322
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 159/314 (50%), Gaps = 6/314 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ L + + ++ A +V + V P DV TY+ ++ +CK ++ A ++
Sbjct: 260 TYNALVNGLCKADKMERAHAMIESMVDKGVTP-DVITYSVLVDAFCKASRVDEALELLHG 318
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + PN++ +N++I+G CK EA + ++ NR P+++T+N +I G C G
Sbjct: 319 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++A L +M + +V T +++ GLC G+ + A L + + P+V +Y V
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G CK G+ +E L+EM + G P ++ ++ L D A+ L+ ++
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+YN ++ GL G+ + +++ M+ GH D ++ G GN+
Sbjct: 499 WDPDTVTYNILVDGL-WKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGT 557
Query: 457 MQIAHEMVTKKGRL 470
M++ +V KG L
Sbjct: 558 MELLR-VVLAKGML 570
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 39/218 (17%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ + + + A F ++V +N+ PDV T+ +I G CK G +E A+ + D+
Sbjct: 365 TFNILIAGACKAGNFEQASALFEEMVAKNM-QPDVMTFGALIDGLCKAGQVEAARDILDL 423
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC------------------- 257
M V PN++ YN +++G CK G +EE + + EM++ GC
Sbjct: 424 MGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASR 483
Query: 258 ----------------RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
P+ +TYN ++ GL +G+ ++A ++ +M G + + T +
Sbjct: 484 TDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 543
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
GL G + LR V+ M PD + +++
Sbjct: 544 CFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 205/413 (49%), Gaps = 29/413 (7%)
Query: 76 NWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK------------------- 116
W S+P + + HT Y + L +H ++S A L++
Sbjct: 1 TWLSSPANST--FRHTLHSYCTMIHFLCTHQMLSEAKXLIQVVVSRKGKGSASAVFAAIL 58
Query: 117 --NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+ SD F+ S LI AY + ++ AI + ++ + + +L L+++
Sbjct: 59 ETKGTQRSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKY 118
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYN 230
KL F+ I+ E P + + ++ +CK G I A+ VFD +T ++P++++YN
Sbjct: 119 FKLVWGFYKXIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYN 177
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
T++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D+A L +M +
Sbjct: 178 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 237
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G +A
Sbjct: 238 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQA 297
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
L+ EM +GLKP ++ + + G+LD A K+M Q + + V+Y +I G
Sbjct: 298 HHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISG 357
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
LC +GR D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 358 LC-QEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEM 409
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 160/291 (54%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F + + SYN+L+ +R+ L E F
Sbjct: 139 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD--LDEGFRLK 196
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK +++A ++FD M VK PN + + T+I+G CK
Sbjct: 197 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 256
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + M+++ P+ +TYN +IYGLC G + +A L+ +M + G K + T+
Sbjct: 257 GRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITY 316
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G D A + + +++ N+ D +Y +I+G C+ G+S +A +L+EM +
Sbjct: 317 TTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLS 376
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GLKP ++ + + G++ + LLK+M + +P+ V+YN ++ G
Sbjct: 377 VGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 106/201 (52%), Gaps = 1/201 (0%)
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
+N +++ C +G + A+ + + G + +V ++ +++ G +G D+ ++
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 200
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ + PDV +Y V+ING CK K D+A L EM +GL P +F + +NG +D
Sbjct: 201 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 260
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A+ + K+M LP+ ++YNT+I GLC KG ++ L+D M G D Y+ L
Sbjct: 261 LAMEIYKRMLSQSLLPDLITYNTLIYGLC-KKGDLKQAHHLIDEMSMKGLKPDKITYTTL 319
Query: 444 LKGYCEEGNVENVMQIAHEMV 464
+ G C+EG+++ + M+
Sbjct: 320 IDGCCKEGDLDTAFEHRKRMI 340
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 19/264 (7%)
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD-- 278
T + L +Y TMI+ C L EAK + +++R + + A I R D
Sbjct: 10 TFRHTLHSYCTMIHFLCTHQMLSEAKXLIQVVVSRKGKGSASAVFAAILETKGTQRSDIF 69
Query: 279 ----------EAKMLMAKM------RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
E++ L + R + F T + +L+ L + F G+ + +
Sbjct: 70 VFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKXI 129
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+E + + ++++ FCK G A S+ + GL+P+V S+N + + G+L
Sbjct: 130 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 189
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
D L M P+ +Y+ +I GLC + +M D +L D M+ G + ++
Sbjct: 190 DEGFRLKSAMLASGVQPDVYTYSVLINGLC-KESKMDDANELFDEMLVKGLVPNGVTFTT 248
Query: 443 LLKGYCEEGNVENVMQIAHEMVTK 466
L+ G+C+ G V+ M+I M+++
Sbjct: 249 LIDGHCKNGRVDLAMEIYKRMLSQ 272
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ C G A + + + P V SY ++NG+ ++G DE L M A G
Sbjct: 144 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 203
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
++P V++++ + L + ++D A L +M +PN V++ T+I G C GR+
Sbjct: 204 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC-KNGRVDLA 262
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ RM+ D Y+ L+ G C++G+++ + EM K
Sbjct: 263 MEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK 307
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 183/353 (51%), Gaps = 5/353 (1%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+L++ + F + +I + ++AA ++ K + +YN ++G L
Sbjct: 128 ILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 187
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYN 230
+ LA + Q++ +N +P V TYT +I G I A K+ + M + P++ YN
Sbjct: 188 LGLALKVLDQLLLDNCMP-TVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 246
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+I G CK+G +E A + + + ++GC+P+ ++YN ++ G+ DE + L+A+M
Sbjct: 247 AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G + N T+ ++ LC G+ D+A+ L+ ++E + PD SY+ +I+ CK G+ D A
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
I ++ M + G P + ++N + L +NG ++A+ + ++ M C PN SYNT+I
Sbjct: 367 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 426
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L R + + +V MI G + D Y+ L+ C +G VE + + +M
Sbjct: 427 LWSCGDRSRAL-GMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDM 478
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 168/313 (53%), Gaps = 5/313 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y L+ + I A + +++ ++P D+ TY +IRG CK GM+E A ++
Sbjct: 209 TYTILIEATIVEGGINEAMKLLEEMLARGLLP-DMYTYNAIIRGMCKEGMVERAAELITS 267
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+T KP++++YN ++ F +G+ +E +K + EM +RGC PN++TY+ +I LC GR
Sbjct: 268 LTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGR 327
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEA ++ M + ++ ++ LC G+ D A+G + ++ PD+ +Y
Sbjct: 328 IDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNT 387
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ CK G +++A+ + ++R G P V S+N + L G+ RA+ ++ M
Sbjct: 388 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 447
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ ++YN++I LC G +++ L+D M +SG Y+ +L G C+ +++
Sbjct: 448 VDPDEITYNSLISCLC-RDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 506
Query: 457 MQIAHEMVTKKGR 469
+ + EM+ K R
Sbjct: 507 IGMFAEMIEKGCR 519
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 156/321 (48%), Gaps = 38/321 (11%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--VKPNLLAYNTMINGFC 237
+F + + PDV T +I+G+ IE A +V +++ +P++ AYN +I+GFC
Sbjct: 89 YFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFC 148
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC------------------------- 272
K +E A + +N M RG P+ +TYN MI LC
Sbjct: 149 KVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVI 208
Query: 273 ----------INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
+ G ++EA L+ +M G ++ T+ ++++G+C G ++A + ++
Sbjct: 209 TYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL 268
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
PDV SY +++ F GK DE L+ EM +RG +P +++ + L G +
Sbjct: 269 TSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRI 328
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
D AI +LK M + + P+ SY+ +I LC +GR+ ++D MI +G D Y+
Sbjct: 329 DEAISVLKVMIEKELTPDTYSYDPLISALC-KEGRLDLAIGIMDYMISNGCLPDIVNYNT 387
Query: 443 LLKGYCEEGNVENVMQIAHEM 463
+L C+ GN ++I +++
Sbjct: 388 ILAALCKNGNANQALEIFNKL 408
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 138/266 (51%), Gaps = 4/266 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL + E+ ++ P V TY+ +I C+ G I+ A V V
Sbjct: 279 SYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV-TYSILISSLCRFGRIDEAISVLKV 337
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+ +Y+ +I+ CK+G L+ A M+ M++ GC P+ + YN ++ LC NG
Sbjct: 338 MIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGN 397
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++A + K+R G NVS++ +M+ L G +A+G + ++ ++PD +Y
Sbjct: 398 ANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNS 457
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ C+ G +EAI LL +M G +PTV S+N V L + +D AI + +M +
Sbjct: 458 LISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 517
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVE 422
C PN +Y +I G+ A R + +E
Sbjct: 518 CRPNETTYILLIEGIGFAGWRTEAME 543
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 4/237 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + G + AI + E YSY+ L+ L + + LA ++
Sbjct: 316 SILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMIS 375
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELE 243
+P D+ Y T++ CK G A ++F+ M PN+ +YNTMI+ G+
Sbjct: 376 NGCLP-DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + M+++G P+E+TYN++I LC +G V+EA L+ M +GF+ V ++ +L
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 494
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
GLC V + D A+G ++E P+ +Y ++I G G EA+ L + +R
Sbjct: 495 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 551
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 35/270 (12%)
Query: 232 MINGFCKKGELEEAKKCMNEMMNRG----------------------------------C 257
++N CK G+ E+ + ++N+G
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ YNA+I G C R++ A ++ +M+ GF ++ T+ M+ LC K A+
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L ++ N P V +Y ++I G +EA+ LL+EM ARGL P ++++NA+ R +
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G ++RA L+ + C P+ +SYN ++ + +G+ + E LV M G +
Sbjct: 254 KEGMVERAAELITSLTSKGCKPDVISYNILLRAF-LNQGKWDEGEKLVAEMFSRGCEPNK 312
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
YS L+ C G ++ + + M+ K+
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKE 342
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 169/309 (54%), Gaps = 5/309 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ LI+A+ + V A Q+ + C ++N L+ + + E H ++
Sbjct: 266 VGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMI 325
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
+N PD+ TY +I G+CK M A +VF+ + + P+++ Y T+I+GFCK G+L
Sbjct: 326 VKNR-NPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQL 384
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E+A K EM+++G PNE +YN +IYG C G +DEA L KM +G+K+ + ++
Sbjct: 385 EDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTL 444
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC+ G+ D+A + R + N+ DV +Y +I GFC+ GK ++ LLKE++A+GL
Sbjct: 445 ILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGL 504
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+P+ S+ + + L + G + A + M P + + II GLC ++ +E
Sbjct: 505 QPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGME 564
Query: 423 DLVDRMIRS 431
L+ M++S
Sbjct: 565 WLI-TMLKS 572
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 3/230 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+K+ PD+ YTT+I G+CKMG +E+A K++ M K PN +YNT+I GFCK G
Sbjct: 359 LKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGN 418
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L+EA K +M++ G + L+ N +I GLC++GR DEA +M +V T+ +
Sbjct: 419 LDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNT 478
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+++G C GK Q+ L+ + + P SY +I C++G EA + +M RG
Sbjct: 479 LIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRG 538
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L+P V + + + L E G + + L M + + P ++ +I L
Sbjct: 539 LQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSL 588
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 207/462 (44%), Gaps = 17/462 (3%)
Query: 8 LTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTN 67
L N++Q D S + + VI R P+ +S P F + ++++ + N
Sbjct: 84 LLNLTQRKDVSEIAAEVGKVI-RSKPRWEQSL-LSDYPSFNFH---DPSFFSELLKQLNN 138
Query: 68 PYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFIS 127
+ +L FF W S+ P H C +L + + + + L +
Sbjct: 139 VFLSLRFFLWLSS---QPEFLPHPVSCNKLFDALLEAKACVPAKSFLYSFEFSPEPASLE 195
Query: 128 KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
I+ + G V+ A++ F K+ + ++N ++ L + + +++
Sbjct: 196 NYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMET 255
Query: 188 NVVPP-DVSTYTTMIRGYCKMGMIENAKKVF-----DVMTVKPNLLAYNTMINGFCKKGE 241
V D+ T +I+ +C + A ++ D +T P A+N +I+GFCK+
Sbjct: 256 GVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLT--PCNDAFNKLISGFCKEKN 313
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ ++ M+ + P+ TY +I G C N +A + ++ G+ ++ + +
Sbjct: 314 HHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTT 373
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C +G+ + A +++ P+ SY +I GFCKIG DEA+ L K+M G
Sbjct: 374 LIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSG 433
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
K T S N + L +G D A ++MP + + + ++YNT+I G C +G++
Sbjct: 434 YKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFC-REGKVLQS 492
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
DL+ + G + Y+ L++ C+ G+V+ ++ ++M
Sbjct: 493 TDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDM 534
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 114/226 (50%), Gaps = 10/226 (4%)
Query: 127 SKLIKAYGDRGNVK-AAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ LI + G ++ A+ WF + I+ G YSYN+L+ ++ ++ A + + +
Sbjct: 372 TTLIHGFCKMGQLEDASKLWF---EMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKK 428
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKG 240
++ +S T+I G C G + A F M K +++ YNT+I GFC++G
Sbjct: 429 MLDSGYKETTLSC-NTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREG 487
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++ ++ + E+ +G +P+ +Y +I LC G V EAK + M G + V T
Sbjct: 488 KVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRD 547
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
++ GLC G + + +L ++++N+ P +++ +I +IGK
Sbjct: 548 HIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIGK 593
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 123/300 (41%), Gaps = 3/300 (1%)
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNL 226
+L ++N++ L+ FF + + P + + + AK P
Sbjct: 132 LLKQLNNVFLSLRFFLWLSSQPEFLPHPVSCNKLFDALLEAKACVPAKSFLYSFEFSPEP 191
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
+ I C+ G +EEA + + G RP T+N GR D L
Sbjct: 192 ASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEG 251
Query: 287 MRLNGFKDNV--STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G + +V T +++ C K +A LR +E + P ++ +I+GFCK
Sbjct: 252 MMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKE 311
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
+ L+ M + P +F++ + +N +A + + P+ V Y
Sbjct: 312 KNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMY 371
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
T+I G C G+++D L MI G + Y+ L+ G+C+ GN++ M++ +M+
Sbjct: 372 TTLIHGFC-KMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKML 430
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 160/285 (56%), Gaps = 4/285 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y GN+ HQ ++ +++Y++L+ L + N + A F ++ K
Sbjct: 281 LINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG 340
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
++P DV +TT+I G+ + G I+ K+ + M K P+++ YNT++NGFCK G+L A
Sbjct: 341 LIPNDV-IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ M+ RG RP+++TY +I G C G V+ A + +M NG + + +++ G
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+C G+ A LR ++ A + PD +Y ++++ FCK G + LLKEM++ G P+
Sbjct: 460 MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS 519
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
V ++N + L + G++ A +LL M + +P+ ++YNT++ G
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 203/422 (48%), Gaps = 33/422 (7%)
Query: 68 PYHALF-FFNW-ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL------KNSN 119
P ++F FF + +S P + T Y + L H + + A SL+ K N
Sbjct: 97 PQRSIFAFFKFISSQPG-----FRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKN 151
Query: 120 KLSDFFIS---------------KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL 164
S FIS L+ Y D G + AI F +++ + +L
Sbjct: 152 SASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNL 211
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--- 221
L ++++N F+ +I+ P +V + ++ +CK G I +A+KVFD +T
Sbjct: 212 LDRMMKLNPTGTIWGFYMEILDAGF-PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++P ++++NT+ING+CK G L+E + ++M RP+ TY+A+I LC ++D A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L +M G N +++ G G+ D + ++ + PD+ Y ++NGF
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK G A +++ M RGL+P ++ + G+++ A+ + K+M Q +
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
V ++ ++CG+C +GR+ D E + M+R+G D Y+ ++ +C++G+ + ++
Sbjct: 451 VGFSALVCGMC-KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509
Query: 462 EM 463
EM
Sbjct: 510 EM 511
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 164/327 (50%), Gaps = 5/327 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + GN+ A F + + + S+N+L+ +V ++ HQ+ K
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
PDV TY+ +I CK ++ A +FD M + PN + + T+I+G + GE++
Sbjct: 306 T-RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLM 364
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K+ +M+++G +P+ + YN ++ G C NG + A+ ++ M G + + T+ +++ G
Sbjct: 365 KESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDG 424
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G + A+ + + + + D + ++ G CK G+ +A L+EM G+KP
Sbjct: 425 FCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++ + + G+ LLK+M +P+ V+YN ++ GLC G+M++ + L+
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL-GQMKNADMLL 543
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGN 452
D M+ G D Y+ LL+G+ N
Sbjct: 544 DAMLNIGVVPDDITYNTLLEGHHRHAN 570
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 177/339 (52%), Gaps = 5/339 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IK+ G V AI F + + Y+Y +L+ L +V+ I A ++ E
Sbjct: 187 IIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEG 246
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P +T+ +I G CK G K+ D M +K PN + YNT+I+G C KG+L++A
Sbjct: 247 CFPSP-ATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 305
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ M++ C PNE+TY +I GL GR + ++ M G+ N + ++ G
Sbjct: 306 LSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSG 365
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L GK ++A+ + M+ + Y +++G C+ K DEA+ +L EM +G P
Sbjct: 366 LFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPN 425
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
F+F+++ + E G +AI + K M +++C N V Y+ +I GLC G++ + +
Sbjct: 426 AFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLC-KDGKVMEAMMVW 484
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+M+ +G D YS +++G C+ G+VE +++ +EM+
Sbjct: 485 AKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEML 523
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 143/296 (48%), Gaps = 7/296 (2%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD------VMTVKPNLLAYN 230
A E F+++ E P V ++ +++ + G + A + ++ M + PN+L++N
Sbjct: 126 AIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFN 185
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+I CK G ++ A + EM R C P+ TY ++ GLC R+DEA L+ +M++
Sbjct: 186 LIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIE 245
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G + +T ++ GLC G F + + N+ P+ +Y +I+G C GK D+A
Sbjct: 246 GCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 305
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+SLL M + P ++ + LV+ G +L M + + N Y+ ++ G
Sbjct: 306 LSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSG 365
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L +G+ ++ L + G L+ +YS L+ G C + + M+I EM K
Sbjct: 366 L-FKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDK 420
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 158/326 (48%), Gaps = 22/326 (6%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
IEN A +NSL VL N ++L F + ++ M + Y K +
Sbjct: 79 IENYAYSSDFNSLEKVL---NRMRLENRVFSE-----------KSFFVMFKAYGKAHLPN 124
Query: 212 NAKKVFDVMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM---NRGCRPNELTY 264
A ++F M+ KP + ++N+++N + G + A + N ++ + PN L++
Sbjct: 125 KAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSF 184
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I +C G VD A L +M + + T+ +++ GLC V + D+AV L +
Sbjct: 185 NLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQI 244
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
P ++ V+ING CK G L+ M +G P ++N + L G+LD+
Sbjct: 245 EGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 304
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A+ LL +M C+PN V+Y TII GL + +GR D ++ M G+ ++ +YS L+
Sbjct: 305 ALSLLDRMVSSKCVPNEVTYGTIINGL-VKQGRALDGARVLVLMEERGYIVNEYVYSVLV 363
Query: 445 KGYCEEGNVENVMQIAHEMVTKKGRL 470
G +EG E M++ E + K +L
Sbjct: 364 SGLFKEGKSEEAMRLFKESMDKGCKL 389
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 147/320 (45%), Gaps = 45/320 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ L + A ++V VP +V TY T+I G K G + +V +
Sbjct: 288 TYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEV-TYGTIINGLVKQGRALDGARVLVL 346
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + N Y+ +++G K+G+ EEA + E M++GC+ N + Y+A++ GLC + +
Sbjct: 347 MEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRK 406
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN--------------- 321
DEA ++++M G N T S++KG VG +A+ ++
Sbjct: 407 PDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSV 466
Query: 322 ----------VMEANM----------NPDVKSYEVVINGFCKIGKSDEAISLLKEMRA-- 359
VMEA M PDV +Y +I G C G +EA+ L EM
Sbjct: 467 LIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLE 526
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+P V ++N +F L + + RA+ LL M C P+ V+ N + L Q
Sbjct: 527 PDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQ 586
Query: 420 D----VEDLVDRMIRSGHNL 435
D +++LV R+++ NL
Sbjct: 587 DGAKFLDELVVRLLKRQRNL 606
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 116/229 (50%), Gaps = 14/229 (6%)
Query: 159 YSYNSLLGVLVRV----NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
Y Y+ L+ L + +++L +E + K N V Y+ ++ G C+ + A
Sbjct: 357 YVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTV-----LYSALVDGLCRDRKPDEAM 411
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
K+ MT K PN +++++ GF + G +A + +M C NE+ Y+ +I+GL
Sbjct: 412 KILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGL 471
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM--EANMNP 329
C +G+V EA M+ AKM G + +V + SM++GLC G ++A+ ++ E + P
Sbjct: 472 CKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQP 531
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
DV +Y ++ N CK A+ LL M RG P + + N R+L E
Sbjct: 532 DVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLRE 580
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 12/153 (7%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQI---ENGACLYSYNSLLGVLVRVNSIKLAEEF 180
F S L+K + + GN AI + +I EN C Y+ L+ L + + A
Sbjct: 427 FTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVC---YSVLIHGLCKDGKVMEAMMV 483
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV-----KPNLLAYNTMING 235
+ +++ PDV Y++MI+G C G +E A K+++ M +P+++ YN + N
Sbjct: 484 WAKMLATGC-RPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNA 542
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
CK+ + A +N M++RGC P+ +T N +
Sbjct: 543 LCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFL 575
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 164/311 (52%), Gaps = 5/311 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+YS N L+ L R+N + A ++ K + P ST+ +I G C G I+ A ++F
Sbjct: 123 VYSLNVLINCLCRLNHVDFAVSILGKMFKLG-IHPTASTFNALINGLCNEGKIKEAVELF 181
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + PN+++YNT+ING CK G A +M GC+P+ +TYN +I LC +
Sbjct: 182 NEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKD 241
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
V++A +++M G NV T+ M+ G C++G+ ++A + ++ ++ PD +
Sbjct: 242 RLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTL 301
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++G CK G EA + + M +G++P + ++NA+ ++ A + + M +
Sbjct: 302 TILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIR 361
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P SYN +I G C ++ RM + + L+ M N D YS L++G C+ G +
Sbjct: 362 QGCAPGVHSYNILINGFCKSR-RMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPK 420
Query: 455 NVMQIAHEMVT 465
+ I EM +
Sbjct: 421 EALNIFKEMCS 431
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 176/341 (51%), Gaps = 9/341 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G +K A+ F++ + + + SYN+++ L + + +A + F ++ ++N
Sbjct: 164 LINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM-EQN 222
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
PDV TY T+I CK ++ +A + M + PN+ YN M++GFC G+L EA
Sbjct: 223 GCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEA 282
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ EM+ R P+ +T ++ GLC G V EA+++ M G + N+ST+ +++ G
Sbjct: 283 TRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDG 342
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C+ ++A ++ P V SY ++INGFCK + DEA SLL EM + L P
Sbjct: 343 YCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPD 402
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+++ + + L + G A+ + K+M LPN V+Y+ ++ G C G + + L+
Sbjct: 403 TVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFC-KHGHLDEALKLL 461
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M + ++ L++G G +E +A E+ +K
Sbjct: 462 KSMQEKKLEPNIVHHTILIEGMFIAGKLE----VAKELFSK 498
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 187/373 (50%), Gaps = 15/373 (4%)
Query: 89 HHTTPCYTAITDVLLSHSLISIAASL----LKNSNKLSDFFISKLIKAYGDRGNVKAAIF 144
H T + A+ + L + I A L ++ ++ + + +I GN A+
Sbjct: 155 HPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVD 214
Query: 145 WFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
F K++E C + +YN+++ L + + A EF +++ + PP+V TY M+
Sbjct: 215 VF---KKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGI-PPNVFTYNCMV 270
Query: 202 RGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
G+C +G + A ++F M V P+ + +++G CK+G + EA+ M +G
Sbjct: 271 HGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVE 330
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
PN TYNA++ G C+ ++EAK + M G V ++ ++ G C + D+A
Sbjct: 331 PNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSL 390
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
L + +NPD +Y ++ G C+ G+ EA+++ KEM + GL P + +++ + +
Sbjct: 391 LAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCK 450
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
+G LD A+ LLK M + PN V + +I G+ +A G+++ ++L ++ G
Sbjct: 451 HGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIA-GKLEVAKELFSKLFADGIRPTIR 509
Query: 439 MYSCLLKGYCEEG 451
Y+ ++KG +EG
Sbjct: 510 TYTVMIKGLLKEG 522
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 144/265 (54%), Gaps = 4/265 (1%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + E V P++STY ++ GYC ++ AKKVF++M + P + +YN +INGFCK
Sbjct: 322 ETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKS 381
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
++EAK + EM ++ P+ +TY+ ++ GLC GR EA + +M G N+ T+
Sbjct: 382 RRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTY 441
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+L G C G D+A+ L+++ E + P++ + ++I G GK + A L ++ A
Sbjct: 442 SILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFA 501
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G++PT+ ++ + + L++ G D A L ++M LPN SYN +I G +
Sbjct: 502 DGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSST 561
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLL 444
+ L+D M+ + + + + LL
Sbjct: 562 AIR-LIDEMVGKRFSANLSTFQMLL 585
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 137/279 (49%), Gaps = 5/279 (1%)
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAY 229
SI A F+++V+ N P V+ + + + K + D+ V N+ +
Sbjct: 68 SIDDALASFYRMVRMNP-RPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSL 126
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +IN C+ ++ A + +M G P T+NA+I GLC G++ EA L +M
Sbjct: 127 NVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVR 186
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G + NV ++ +++ GLC G AV + + + PDV +Y +I+ CK ++
Sbjct: 187 RGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVND 246
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A+ L EM RG+ P VF++N + G+L+ A L K+M D +P+ V+ ++
Sbjct: 247 AMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVD 306
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
GLC +G + + + + M G + + Y+ L+ GYC
Sbjct: 307 GLC-KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYC 344
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 8/207 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++L+ L + K A F ++ ++P ++ TY+ ++ G+CK G ++ A K+
Sbjct: 405 TYSTLMQGLCQFGRPKEALNIFKEMCSYGLLP-NLVTYSILLDGFCKHGHLDEALKLLKS 463
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ + +I G G+LE AK+ +++ G RP TY MI GL G
Sbjct: 464 MQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGL 523
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
DEA L KM +GF N ++ M++G A+ + ++ + ++ ++++
Sbjct: 524 SDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQM 583
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLK 363
+++ + DE IS ++G K
Sbjct: 584 LLD----LESQDEIISQFMRGSSQGRK 606
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+V S V+IN C++ D A+S+L +M G+ PT +FNA+ L G++ A+ L
Sbjct: 122 NVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELF 181
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+M + PN +SYNTII GLC G D+ +M ++G D Y+ ++ C+
Sbjct: 182 NEMVRRGHEPNVISYNTIINGLC-KTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCK 240
Query: 450 EGNVENVMQIAHEMVTK 466
+ V + M+ EM+ +
Sbjct: 241 DRLVNDAMEFLSEMLDR 257
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 165/306 (53%), Gaps = 7/306 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA---- 213
L++Y++LL L R+ + +H+++ E V P++ Y +I CK G + +A
Sbjct: 350 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGV-QPNLLIYNAVINALCKDGNVADAETIM 408
Query: 214 KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
KKVF+ + P+ Y +MI G C+K +L+ A + N+M GC PN +TY+ +I GLC
Sbjct: 409 KKVFES-EMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 467
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+GRV+EA L+ +M L+G T + LC +G ++ A ++ P+V +
Sbjct: 468 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 527
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I+G C G AI L M G+ P ++NA+ ILVEN + A ++L M
Sbjct: 528 YTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 587
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ N V+YN +I G C+ G + +++ M++ GH+ + Y+ ++KGYC+ GN
Sbjct: 588 RNGLFTNIVTYNEMIKGYCIL-GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 646
Query: 454 ENVMQI 459
+ ++I
Sbjct: 647 TSALRI 652
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 160/319 (50%), Gaps = 8/319 (2%)
Query: 151 QIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
++N C +Y+Y +L+ L +K+A FH++ ++ V P V TY +I +
Sbjct: 515 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV-TYNALINILVEN 573
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
I+ A V ++M + N++ YN MI G+C G+ ++A MN M+ RG N +TY
Sbjct: 574 RRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTY 633
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I G C +G A ++ MR G K + ++ ++ G C + K + A G +++
Sbjct: 634 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 693
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P+ +Y +I+G+CK K D A SLL+ M+ G +P V ++N + L +
Sbjct: 694 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 753
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A L K M + PN V+Y +I GLC G ++ ++MI G + YS L+
Sbjct: 754 AEELCKVMIEEGIFPNVVTYTAMIDGLC-KNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 812
Query: 445 KGYCEEGNVENVMQIAHEM 463
+ +EG VE + E+
Sbjct: 813 RALGQEGKVEEAENLFAEL 831
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 174/360 (48%), Gaps = 38/360 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLA------ 177
+ + LI G +K AI FH+ + +YN+L+ +LV IK A
Sbjct: 526 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 585
Query: 178 ---EEFFHQIVKENVV-------------------------PPDVSTYTTMIRGYCKMGM 209
F IV N + ++ TY T+I+GYC G
Sbjct: 586 MGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 645
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A ++ D+M KP+ +Y +I GFCK ++E A NEM++ G PNE+TY A
Sbjct: 646 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 705
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I G C + ++D A L+ M+ +G + NV T+ ++ GL F A + ++E
Sbjct: 706 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 765
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P+V +Y +I+G CK G + A+ + +M +G P + +++++ R L + G+++ A
Sbjct: 766 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 825
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L ++ + +P+ ++Y +I M+ G+++ + + RMI++G Y L+KG
Sbjct: 826 NLFAELERHGLIPDEITYVKMIEAYIMS-GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 884
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 176/414 (42%), Gaps = 110/414 (26%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ L + ++ AE ++ E+ + PD TYT+MI G+C+ +++A +VF+ M
Sbjct: 388 YNAVINALCKDGNVADAETIMKKVF-ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 446
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM------------------------ 253
+PN + Y+T+ING C G + EA + EM+
Sbjct: 447 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 506
Query: 254 -----------NRGCRPNELTYNAMIYGLCING--------------------------- 275
N+GC PN TY A+I GLC++G
Sbjct: 507 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 566
Query: 276 --------RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME--- 324
R+ A +++ M NG N+ T+ M+KG C++G +A+ + N+++
Sbjct: 567 INILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 626
Query: 325 -ANM-------------------------------NPDVKSYEVVINGFCKIGKSDEAIS 352
AN+ PD SY +I GFCKI K + A
Sbjct: 627 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 686
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
L EM GL P ++ A+ ++ +LD A LL+ M + C PN +YN +I GL
Sbjct: 687 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL- 745
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E+L MI G + Y+ ++ G C+ G+ +++ ++M+ +
Sbjct: 746 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 799
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 176/400 (44%), Gaps = 60/400 (15%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
YTA+ D + A SLL++ +K G R NV+
Sbjct: 703 YTALIDGYCKDEKLDTATSLLEH------------MKRSGCRPNVQ-------------- 736
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
+YN L+ L + N+ AEE +++E + P +V TYT MI G CK G A
Sbjct: 737 -----TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP-NVVTYTAMIDGLCKNGSTSLAL 790
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++F+ M + PNLL Y+++I ++G++EEA+ E+ G P+E+TY MI
Sbjct: 791 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 850
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL--------------------CVVG- 310
++G+V+ A + +M G + + T+ ++KGL C G
Sbjct: 851 IMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGY 910
Query: 311 -KFDQAVGYLRNVMEANMNP--DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
DQ + + A ++P V+ +++ G+ EA LL M ++GL P
Sbjct: 911 QTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQE 970
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++N++ L+ +D A+ + K M C + Y +IC LC R ++ +
Sbjct: 971 AYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLH-RRKEARITFEN 1029
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
M+ N D + + L+ G +G + M+ H M T++
Sbjct: 1030 MLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 1069
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 1/223 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ L AY+ ++ + G + M++ G +PN L YNA+I LC +G V +A+
Sbjct: 346 LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAE 405
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+M K+ + + T+ SM+ G C D A+ + + P+ +Y +ING
Sbjct: 406 TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGL 465
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C G+ +EA L++EM G+ PT + L + G + A L M C PN
Sbjct: 466 CDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 525
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
+Y +I GLC++ G ++ L RM R G + Y+ L+
Sbjct: 526 YTYTALISGLCVS-GLLKVAIGLFHRMSRDGVFPNTVTYNALI 567
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 1/215 (0%)
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ + G R Y+A++ L G +M G + N+ + +++ LC
Sbjct: 338 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 397
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G A ++ V E+ M+PD +Y +I G C+ D A+ + +M G +P +
Sbjct: 398 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 457
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++ + L ++G ++ A L+++M LP + I LC G +D L M
Sbjct: 458 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALC-DMGCYEDAWRLFVDM 516
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + Y+ L+ G C G ++ + + H M
Sbjct: 517 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 551
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 125/314 (39%), Gaps = 38/314 (12%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSD-------FFISKLIKAYGDRGNVKAAIFWFH 147
YTA+ D L + S+A + NK+ + S LI+A G G V+ A F
Sbjct: 773 YTAMIDGLCKNGSTSLALEMF---NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 829
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY--- 204
+ ++ +Y ++ + ++ A F +++K P + TY +I+G
Sbjct: 830 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC-QPTLWTYGVLIKGLKNE 888
Query: 205 -----------------CKMGMIENAKKVFDVMTVK-----PNL--LAYNTMINGFCKKG 240
C G + VM+ K P L N +++ G
Sbjct: 889 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 948
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
EA + + M+++G P++ YN+++ L VD A + M G + +++ +K
Sbjct: 949 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 1008
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ LC + + +A N++ NPD V+I+G + G D + L M R
Sbjct: 1009 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 1068
Query: 361 GLKPTVFSFNAVFR 374
P+ + + R
Sbjct: 1069 RYMPSFHIYTILAR 1082
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ + +L + ++ + + +Y ++ ++G + + M + G++P + +NAV
Sbjct: 333 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 392
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L ++G + A ++K++ + + P+ +Y ++I G C K + + ++M + G
Sbjct: 393 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR-KHDLDSALQVFNQMAKEGC 451
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ YS L+ G C+ G V + EM+
Sbjct: 452 EPNTVTYSTLINGLCDSGRVNEAFDLIREMI 482
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 227/490 (46%), Gaps = 61/490 (12%)
Query: 12 SQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHA 71
S+ P Q+I V+ + +++ R+ + S L Q S L ++ V +++ +
Sbjct: 40 SREPFQAI-VSRVCAILSRVQWK-------GSSELKQLSPQLKAHHVAEIVAVHKDTESV 91
Query: 72 LFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIK 131
+ FF W S P Y H C+ ++ + L+ + + A D +IK
Sbjct: 92 IQFFYWISK---RPF-YKHNMNCFISMLNRLVRDRVFAPA-----------DHIRILMIK 136
Query: 132 AYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP 191
A + ++ + ++ + G LYS N+LL L + ++ A + Q++ + P
Sbjct: 137 ACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQP 196
Query: 192 ----------------------------------PDVSTYTTMIRGYCKMGMIENAKKVF 217
PDV TYT++I G+C+ ++ A VF
Sbjct: 197 SLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVF 256
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M PN + Y+T+ING C +G ++EA + EM+ +G P TY I LC
Sbjct: 257 DRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAI 316
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+EA L+A+M+ G + NV T+ +++ GL +GK + A+G +++ + P+ +Y
Sbjct: 317 EHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTY 376
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+IN C G+ A+ + M G ++N + + L G++++A++L ++M +
Sbjct: 377 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 436
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
M LP V+YNT+I G + KG + + L+D M +G D Y+ L+ G+ + G +E
Sbjct: 437 MGPLPTVVTYNTLINGY-LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495
Query: 455 NVMQIAHEMV 464
+ EMV
Sbjct: 496 SASFYFQEMV 505
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 155/310 (50%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ L R+ +++A +H+++KE +VP V TY +I C G A K+F
Sbjct: 340 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV-TYNALINELCVGGRFSTALKIFHW 398
Query: 220 MTVKPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +L YN +I G C G++E+A +M+ G P +TYN +I G G
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+ A L+ M+ NG + + T+ ++ G GK + A Y + ++E +NP+ SY
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G K GK D A+SLLK M G P V S+NAV L + A + +M +
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
LPN ++Y T+I GLC GR Q + M + + YS L+ G C+EG +
Sbjct: 579 LLPNVITYTTLIDGLC-RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637
Query: 457 MQIAHEMVTK 466
+ EM K
Sbjct: 638 EILLKEMERK 647
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 142/279 (50%), Gaps = 4/279 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
P+V TYT +I G ++G +E A ++ M + PN + YN +IN C G A K
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M G N TYN +I GLC+ G +++A +L KM G V T+ +++ G
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G + A L + E PD +Y +++GF K GK + A +EM GL P S
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 515
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ A+ ++G++D A+ LLK+M +M C PN SYN +I GL + R + E + D+M
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS-KENRFSEAEKICDKM 574
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ G + Y+ L+ G C G + +I H+M +K
Sbjct: 575 VEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 613
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 154/289 (53%), Gaps = 6/289 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL-GVLVRVNSIKLAEEFFHQIV 185
+++IK G+++ A+ F + ++ + +YN+L+ G L + N A ++
Sbjct: 412 NEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR--LLDLM 469
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
KEN PD TY ++ G+ K G +E+A F M + PN ++Y +I+G K G++
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ A + M GC PN +YNA+I GL R EA+ + KM G NV T+ ++
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC G+ A ++ + P++ +Y +I G C+ GK+DEA LLKEM +GL
Sbjct: 590 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 649
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
P +F ++ V G +D A LLL++M M C PN+ +Y+ ++ GL
Sbjct: 650 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGL 698
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 167/317 (52%), Gaps = 5/317 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G A+ FH + + A +YN ++ L I+ A F +++K +P V T
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLP-TVVT 445
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y T+I GY G + NA ++ D+M +P+ YN +++GF K G+LE A EM+
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G PN ++Y A+I G +G+VD A L+ +M G NV ++ +++ GL +F
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A ++E + P+V +Y +I+G C+ G++ A + +M R P +++++++
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L + G+ D A +LLK+M + P+ V++ ++I G + GR+ L+ RM+ G
Sbjct: 626 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVL-GRIDHAFLLLRRMVDMGC 684
Query: 434 NLDFTMYSCLLKGYCEE 450
++ YS LLKG +E
Sbjct: 685 KPNYRTYSVLLKGLQKE 701
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 144/301 (47%), Gaps = 24/301 (7%)
Query: 50 SLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLIS 109
LCLG +I A+ F P P T Y + + L+ ++
Sbjct: 417 GLCLGGDI-----------EKAMVLFEKMLKMGPLP-----TVVTYNTLINGYLTKGNVN 460
Query: 110 IAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
AA LL +N + ++ ++L+ + G +++A F+F + + SY +L+
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK-- 223
+ + +A ++ +E P+V +Y +I G K A+K+ D M +
Sbjct: 521 DGHSKDGKVDIALSLLKRM-EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGL 579
Query: 224 -PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
PN++ Y T+I+G C+ G + A K ++M R C PN TY+++IYGLC G+ DEA++
Sbjct: 580 LPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEI 639
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L+ +M G + T S++ G V+G+ D A LR +++ P+ ++Y V++ G
Sbjct: 640 LLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQ 699
Query: 343 K 343
K
Sbjct: 700 K 700
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 187/410 (45%), Gaps = 38/410 (9%)
Query: 67 NPYHALFFFNWASNPNPNPNKYHHTTPC----YTAITD---VLLSHSLISIAASLLKNSN 119
N L F N++S P+ + H P + AI +LS ++ L + S
Sbjct: 15 NHSSVLGFLNFSSKPHISS---HFAVPASREPFQAIVSRVCAILSRVQWKGSSELKQLSP 71
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+L +++++ + D +V +W + + ++ N + +L R
Sbjct: 72 QLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYK-----HNMNCFISMLNR--------- 117
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV------MTVKPNLLAYNTMI 233
+V++ V P MI+ C+ E ++V D M +L + NT++
Sbjct: 118 ----LVRDRVFAPADHIRILMIKA-CRNE--EEIRRVADFLNEISGMGFGFSLYSCNTLL 170
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
K +E A+ +M+N G +P+ LT+N +I L G+V EA+++++++
Sbjct: 171 IQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLS 230
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+V T+ S++ G C D A G +++ +P+ +Y +ING C G+ DEA+ +
Sbjct: 231 PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDM 290
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
L+EM +G++PTV+++ L + AI L+ +M + C PN +Y +I GL
Sbjct: 291 LEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR 350
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G+++ L +M++ G + Y+ L+ C G ++I H M
Sbjct: 351 L-GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 157/307 (51%), Gaps = 5/307 (1%)
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV- 222
+L L R + A E F ++ PDV +YTT+I G CK+G ++ A +F M
Sbjct: 16 ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 75
Query: 223 ---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+PN YN +++G CK+ L+ A+ + E R P+ +TYN ++ L GRVDE
Sbjct: 76 GGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDE 135
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A +M G+ + + +++ GLC + A+ +++ + +P++ +Y VVI+
Sbjct: 136 ALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVID 195
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G CK + DEA LL M + G +P + ++ + G LD A+ LL++M C+P
Sbjct: 196 GLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIP 255
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ V+Y +I LC GR+ D ++ ++ + + + YS L+ GYC V+ ++
Sbjct: 256 DVVTYTVVIDKLCKV-GRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV 314
Query: 460 AHEMVTK 466
EM +
Sbjct: 315 MREMACR 321
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 154/293 (52%), Gaps = 12/293 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ LI G V AA F K + G C ++YN+L+ L + + + A +
Sbjct: 50 TTLINGLCKLGRVDAAFDLFR--KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAE 107
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
K + P DV TY T++ ++G ++ A F MT + P L+++N +I G C+
Sbjct: 108 ARKRDFAP-DVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRAR 166
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
L +A + NEM++R PN +TY+ +I GLC + ++DEA+ L+ +M G + ++ +
Sbjct: 167 RLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYT 226
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ G G+ D A+G LR ++ PDV +Y VVI+ CK+G+ D+A + +E+ A
Sbjct: 227 PLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVAN 286
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
P V +++A+ +D K M +M C PN V+YNT+I GL M
Sbjct: 287 KCSPNVVTYSALIGGYCRASRVDEGG---KVMREMACRPNVVTYNTMIWGLSM 336
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 148/277 (53%), Gaps = 6/277 (2%)
Query: 196 TYTTMIRGYCKMGMIENAKKVFD----VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
T + +++G C+ G + A + FD + +P++++Y T+ING CK G ++ A +
Sbjct: 12 TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 71
Query: 252 MMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M+ G CRPN TYNA++ GLC R+D A+ ++A+ R F +V T+ +++ L +G
Sbjct: 72 MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLG 131
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ D+A+ + E P + S+ +I G C+ + +A+ + EM R P + +++
Sbjct: 132 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYS 191
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
V L ++ +LD A LL +M C P+ V+Y ++ G A GR+ L+ RM+
Sbjct: 192 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGF-SAAGRLDSALGLLRRMVS 250
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G D Y+ ++ C+ G V++ +I E+V K
Sbjct: 251 QGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANK 287
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 13/290 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFF-----ISKLIKAYGDRGNVKAAIFWFHQA 149
Y A+ D L + A +++ + K DF + L+ A G V A+ F Q
Sbjct: 85 YNALVDGLCKQDRLDAARAVIAEARK-RDFAPDVVTYNTLMAALFQLGRVDEALATFTQM 143
Query: 150 KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
+ L S+N+++ L R + A E F++++ + P++ TY+ +I G CK
Sbjct: 144 TEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF-HPNLVTYSVVIDGLCKSDQ 202
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
++ A+++ D M +P+L+AY ++ GF G L+ A + M+++GC P+ +TY
Sbjct: 203 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 262
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I LC GRVD+A + ++ N NV T+ +++ G C + D+ +R E
Sbjct: 263 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR---EMA 319
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
P+V +Y +I G + +++EA + +EM G P ++ + R L
Sbjct: 320 CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 114/216 (52%), Gaps = 3/216 (1%)
Query: 256 GCRPNELTYNAMIYGLCINGRVDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
G + N+ T + ++ GLC GRV +A + A + L + +V ++ +++ GLC +G+ D
Sbjct: 5 GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64
Query: 315 AVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A R ++ A P+ +Y +++G CK + D A +++ E R R P V ++N +
Sbjct: 65 AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L + G +D A+ QM + +P VS+N II GLC A+ R+ D ++ + MI
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRAR-RLADALEVFNEMIDRDF 183
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+ + YS ++ G C+ ++ Q+ MV++ R
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCR 219
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 228/490 (46%), Gaps = 61/490 (12%)
Query: 12 SQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHA 71
S+ P Q+I V+ + +++ R+ + S L Q S L ++ V +++ +
Sbjct: 82 SREPFQAI-VSRVCAILSRVQWK-------GSSELKQLSPQLKAHHVAEIVAVHKDTESV 133
Query: 72 LFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIK 131
+ FF W S P Y H C+ ++ + L+ + + A D +IK
Sbjct: 134 IQFFYWISK---RPF-YKHNMNCFISMLNRLVRDRVFAPA-----------DHIRILMIK 178
Query: 132 AYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP 191
A + ++ + ++ + G LYS N+LL L + ++ A + Q++ + P
Sbjct: 179 ACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQP 238
Query: 192 ----------------------------------PDVSTYTTMIRGYCKMGMIENAKKVF 217
PDV TYT++I G+C+ ++ A VF
Sbjct: 239 SLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVF 298
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M + PN + Y+T+ING C +G ++EA + EM+ +G P TY I LC
Sbjct: 299 DRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAI 358
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+EA L+A+M+ G + NV T+ +++ GL +GK + A+G +++ + P+ +Y
Sbjct: 359 EHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTY 418
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+IN C G+ A+ + M G ++N + + L G++++A++L ++M +
Sbjct: 419 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 478
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
M LP V+YNT+I G + KG + + L+D M +G D Y+ L+ G+ + G +E
Sbjct: 479 MGPLPTVVTYNTLINGY-LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 537
Query: 455 NVMQIAHEMV 464
+ EMV
Sbjct: 538 SASFYFQEMV 547
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 179/364 (49%), Gaps = 29/364 (7%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL-GVLVRVNSIKLAEEFFHQIV 185
+++IK G+++ A+ F + ++ + +YN+L+ G L + N A ++
Sbjct: 454 NEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR--LLDLM 511
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
KEN PD TY ++ G+ K G +E+A F M + PN ++Y T+I+G K G++
Sbjct: 512 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKV 571
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ A + M GC PN +YNA+I GL R EA+ + KM G NV T+ ++
Sbjct: 572 DIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTL 631
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC G+ A ++ + P++ +Y +I G C+ GK+DEA LLKEM +GL
Sbjct: 632 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 691
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL---CM---AKG 416
P +F ++ V G +D A LLL++M + C PN+ +Y+ ++ GL C+ K
Sbjct: 692 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKV 751
Query: 417 RMQD-----------------VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+Q V +L+ RM G YS L+ G C +G Q+
Sbjct: 752 AVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 811
Query: 460 AHEM 463
+M
Sbjct: 812 VKDM 815
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 154/310 (49%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ L R+ +++A +H+++KE +VP V TY +I C G A K+F
Sbjct: 382 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV-TYNALINELCVGGRFSTALKIFHW 440
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M N YN +I G C G++E+A +M+ G P +TYN +I G G
Sbjct: 441 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 500
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+ A L+ M+ NG + + T+ ++ G GK + A Y + ++E +NP+ SY
Sbjct: 501 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTT 560
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G K GK D A+SLL+ M G P V S+NAV L + A + +M +
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG 620
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
LPN ++Y T+I GLC GR Q + M + + YS L+ G C+EG +
Sbjct: 621 LLPNVITYTTLIDGLC-RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 679
Query: 457 MQIAHEMVTK 466
+ EM K
Sbjct: 680 EILLKEMERK 689
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 188/367 (51%), Gaps = 29/367 (7%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI + G V A+ + +++ + SYN+++ L + N AE+ ++ +
Sbjct: 559 TTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAE 618
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ ++P +V TYTT+I G C+ G + A K+F M + PNL Y+++I G C++G+ +
Sbjct: 619 QGLLP-NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 677
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ + EM +G P+E+T+ ++I G + GR+D A +L+ +M G K N T+ +L
Sbjct: 678 EAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLL 737
Query: 304 KGL---CVVGKFDQAVGY---------------------LRNVMEANMNPDVKSYEVVIN 339
KGL C++ + AV + L + E P + +Y +++
Sbjct: 738 KGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVS 797
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G C+ G+ EA L+K+M+ RG P + ++ +N E+D A+ + +
Sbjct: 798 GLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQL 857
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ Y +IC LC A G++++ + L D M+ N D +++ L+ G +EG ++ M++
Sbjct: 858 HLSIYRALICALCKA-GQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKL 916
Query: 460 AHEMVTK 466
H M +K
Sbjct: 917 LHIMESK 923
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 140/279 (50%), Gaps = 4/279 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
P+V TYT +I G ++G +E A ++ M + PN + YN +IN C G A K
Sbjct: 378 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 437
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M G N TYN +I GLC+ G +++A +L KM G V T+ +++ G
Sbjct: 438 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 497
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G + A L + E PD +Y +++GF K GK + A +EM GL P S
Sbjct: 498 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 557
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ + ++G++D A+ LL++M +M C PN SYN +I GL + R + E + D+M
Sbjct: 558 YTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLS-KENRFSEAEKICDKM 616
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G + Y+ L+ G C G + +I H+M +K
Sbjct: 617 AEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 655
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 197/430 (45%), Gaps = 38/430 (8%)
Query: 47 DQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPC----YTAITD-- 100
++FS + +++ + + N L F N++S P+ + H P + AI
Sbjct: 37 ERFSHEMVNHLKSPCLVHLQNHSSVLGFLNFSSKPHISS---HFAVPASREPFQAIVSRV 93
Query: 101 -VLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLY 159
+LS ++ L + S +L +++++ + D +V +W + + +
Sbjct: 94 CAILSRVQWKGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYK-----H 148
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+ N + +L R +V++ V P MI+ C+ E ++V D
Sbjct: 149 NMNCFISMLNR-------------LVRDRVFAPADHIRILMIKA-CRNE--EEIRRVADF 192
Query: 220 ------MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
M +L + NT++ K +E A+ +M+N G +P+ LT+N +I L
Sbjct: 193 LNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSK 252
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G+V EA+++++++ +V T+ S++ G C D A G +++ +P+ +
Sbjct: 253 KGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVT 312
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +ING C G+ DEA+ +L+EM +G++PTV+++ L + AI L+ +M
Sbjct: 313 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK 372
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ C PN +Y +I GL G+++ L +M++ G + Y+ L+ C G
Sbjct: 373 KRGCRPNVQTYTALISGLSRL-GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 431
Query: 454 ENVMQIAHEM 463
++I H M
Sbjct: 432 STALKIFHWM 441
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 146/331 (44%), Gaps = 33/331 (9%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI G + A FH ++ + LY+Y+SL+ L + AE ++ +
Sbjct: 629 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER 688
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGEL 242
+ + P +V T+T++I G+ +G I++A +++ DV KPN Y+ ++ G K+ L
Sbjct: 689 KGLAPDEV-TFTSLIDGFVVLGRIDHAFLLLRRMVDV-GCKPNYRTYSVLLKGLQKECLL 746
Query: 243 EEAK------------------------KCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
E K + M GC P TY+ ++ GLC GR
Sbjct: 747 LEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFY 806
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EA+ L+ M+ GF + + S+L C + D A+ ++ + Y +I
Sbjct: 807 EAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALI 866
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
CK G+ +EA +L M + + + L++ GELD + LL M +
Sbjct: 867 CALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFT 926
Query: 399 PNFVSYNTIICGLCMAK-GRMQDVEDLVDRM 428
PN +Y +I G +++ G+ + E L D++
Sbjct: 927 PNIQTY--VILGRELSRIGKSIESEPLADKL 955
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
P + TY+T++ G C+ G A+++ M + P+ Y +++ CK E++ A K
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 846
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ + +G + + Y A+I LC G+V+EA+ L M + + ++ GL
Sbjct: 847 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 906
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
G+ D + L + N P++++Y ++ +IGKS E+ L +++
Sbjct: 907 EGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 956
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 146 FHQAKQI-----ENGACLYS--YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
F++A+Q+ E G C Y SLL + + A + FH I + +S Y
Sbjct: 805 FYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGF-QLHLSIYR 863
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
+I CK G +E A+ +FD M K + + + +++G K+GEL+ K ++ M ++
Sbjct: 864 ALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESK 923
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
PN TY + L G+ E++ L K+++
Sbjct: 924 NFTPNIQTYVILGRELSRIGKSIESEPLADKLKV 957
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 164/302 (54%), Gaps = 3/302 (0%)
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELE 243
I++E+ DV++Y +I GYCK G IE A +V D M V PN Y+ ++ C +G+L+
Sbjct: 139 ILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLK 198
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + + + C P+ +T +I C V +A L +MR G K +V T+ ++
Sbjct: 199 QAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLI 258
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
KG C G+ D+A+ +L+ + PDV S+ +++ C G+ +A+ LL M +G
Sbjct: 259 KGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCL 318
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P+V +FN + L + G L +A+ +L+ MP+ PN S+N +I G C KG + +E
Sbjct: 319 PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEY 378
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDA 483
L + M+ G D Y+ LL C++G V++ + I ++ + KG L ++ T V+D
Sbjct: 379 L-EIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQL-SSKGCSPSLISYNT-VIDG 435
Query: 484 LL 485
LL
Sbjct: 436 LL 437
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 158/302 (52%), Gaps = 8/302 (2%)
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP--- 224
L+R ++ F + + PDV T +IR +CK+G +NA ++ ++
Sbjct: 89 LIRNGELEEGSRFLEYMTNKGK-SPDVIACTALIREFCKIGRTKNASQIMGILEESGAVI 147
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
++ +YN +I+G+CK GE+EEA + ++ M G PN TY+A++ LC G++ +A ++
Sbjct: 148 DVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVL 204
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+ + +V T ++ C QA+ + PDV +Y V+I GFCK
Sbjct: 205 GRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKG 264
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G+ DEAI LK++ + G +P V S N + R L G A+ LL M + CLP+ V++
Sbjct: 265 GRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTF 324
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
N +I LC KG + ++++ M + GH + ++ L++G+C ++ ++ MV
Sbjct: 325 NILINFLCQ-KGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMV 383
Query: 465 TK 466
++
Sbjct: 384 SR 385
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 163/341 (47%), Gaps = 5/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A V A+ F++ + + +YN L+ + + A F ++
Sbjct: 222 LIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG 281
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
PDV ++ ++R C G +A K+ M K P+++ +N +IN C+KG L +A
Sbjct: 282 C-QPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKA 340
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M G PN ++N +I G C +D A + M G ++ T+ +L
Sbjct: 341 LNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTA 400
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC GK D AV L + +P + SY VI+G K+GK++ A+ LL+EM +GLKP
Sbjct: 401 LCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPD 460
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ + +V L G++ A+ + + PN YN+II GLC ++ ++ L
Sbjct: 461 LITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLA 520
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D M+ G Y+ L+KG EG E+ ++++E+ ++
Sbjct: 521 D-MVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSR 560
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 143/279 (51%), Gaps = 8/279 (2%)
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+R + G +E + + MT K P+++A +I FCK G + A + M + G
Sbjct: 86 LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
+ +YN +I G C +G ++EA ++ +M G N +T+ ++L LC GK QA+
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L +++ PDV + V+I+ CK +A+ L EMR +G KP V ++N + +
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G LD AI LK++P C P+ +S+N I+ LC + GR D L+ M+R G
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLC-SGGRWMDAMKLLATMLRKGCLPSV 321
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
++ L+ C++G + + + EM+ K G ++F
Sbjct: 322 VTFNILINFLCQKGLLGKALNVL-EMMPKHGHTPNSRSF 359
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 4/206 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S+N L+ I A E+ +V P D+ TY ++ CK G +++A +
Sbjct: 358 SFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYP-DIVTYNILLTALCKDGKVDDAVVILSQ 416
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
++ K P+L++YNT+I+G K G+ E A + + EM +G +P+ +T +++ GL G+
Sbjct: 417 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 476
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V EA ++ + N + S++ GLC + A+ +L +++ P +Y
Sbjct: 477 VREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTT 536
Query: 337 VINGFCKIGKSDEAISLLKEMRARGL 362
+I G G +++A L E+ +RGL
Sbjct: 537 LIKGITYEGLAEDASKLSNELYSRGL 562
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLKN----SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y + D LL +A LL+ K + ++ G V+ A+ +FH K
Sbjct: 429 YNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLK 488
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + YNS++ L + LA +F +V + P + +TYTT+I+G G+
Sbjct: 489 RFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTE-ATYTTLIKGITYEGLA 547
Query: 211 ENAKKV 216
E+A K+
Sbjct: 548 EDASKL 553
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 228/490 (46%), Gaps = 61/490 (12%)
Query: 12 SQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHA 71
S+ P Q+I V+ + +++ R+ + S L Q S L ++ V +++ +
Sbjct: 40 SREPFQAI-VSRVCAILSRVQWK-------GSSELKQLSPQLKAHHVAEIVAVHKDTESV 91
Query: 72 LFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIK 131
+ FF W S P Y H C+ ++ + L+ + + A D +IK
Sbjct: 92 IQFFYWISK---RPF-YKHNMNCFISMLNRLVRDRVFAPA-----------DHIRILMIK 136
Query: 132 AYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP 191
A + ++ + ++ + G LYS N+LL L + ++ A + Q++ + P
Sbjct: 137 ACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQP 196
Query: 192 ----------------------------------PDVSTYTTMIRGYCKMGMIENAKKVF 217
PDV TYT++I G+C+ ++ A VF
Sbjct: 197 SLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVF 256
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M + PN + Y+T+ING C +G ++EA + EM+ +G P TY I LC
Sbjct: 257 DRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAI 316
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+EA L+A+M+ G + NV T+ +++ GL +GK + A+G +++ + P+ +Y
Sbjct: 317 EHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTY 376
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+IN C G+ A+ + M G ++N + + L G++++A++L ++M +
Sbjct: 377 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 436
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
M LP V+YNT+I G + KG + + L+D M +G D Y+ L+ G+ + G +E
Sbjct: 437 MGPLPTVVTYNTLINGY-LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495
Query: 455 NVMQIAHEMV 464
+ EMV
Sbjct: 496 SASFYFQEMV 505
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 5/304 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ L R+ +++A +H+++KE +VP V TY +I C G A K+F
Sbjct: 340 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV-TYNALINELCVGGRFSTALKIFHW 398
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M N YN +I G C G++E+A +M+ G P +TYN +I G G
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+ A L+ M+ NG + + T+ ++ G GK + A Y + ++E +NP+ SY
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G K GK D A+SLLK M G P V S+NAV L + A + +M +
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
LPN ++Y T+I GLC GR Q + M + + YS L+ G C+EG +
Sbjct: 579 LLPNVITYTTLIDGLC-RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637
Query: 457 MQIA 460
+++
Sbjct: 638 ERMS 641
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 174/343 (50%), Gaps = 13/343 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGA--CLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y +GNV A K ENG ++YN L+ + ++ A +F ++V+
Sbjct: 449 LINGYLTKGNVNNAARLLDLMK--ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 506
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAK---KVFDVMTVKPNLLAYNTMINGFCKKGELE 243
+ P VS YT +I G+ K G ++ A K + M PN+ +YN +ING K+
Sbjct: 507 CGLNPNPVS-YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+K ++M+ +G PN +TY +I GLC NGR A + M N+ T+ S++
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GLC GK D+A + E P + +Y +++G C+ G+ EA L+K+M+ RG
Sbjct: 626 YGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFC 681
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + ++ +N E+D A+ + + + Y +IC LC A G++++ +
Sbjct: 682 PDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKA-GQVEEAQA 740
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L D M+ N D +++ L+ G +EG ++ M++ H M +K
Sbjct: 741 LFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESK 783
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 142/279 (50%), Gaps = 4/279 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
P+V TYT +I G ++G +E A ++ M + PN + YN +IN C G A K
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M G N TYN +I GLC+ G +++A +L KM G V T+ +++ G
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G + A L + E PD +Y +++GF K GK + A +EM GL P S
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 515
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ A+ ++G++D A+ LLK+M +M C PN SYN +I GL + R + E + D+M
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS-KENRFSEAEKICDKM 574
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ G + Y+ L+ G C G + +I H+M +K
Sbjct: 575 VEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 613
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 156/306 (50%), Gaps = 11/306 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI + G V A+ + +++ + SYN+++ L + N AE+ ++V+
Sbjct: 517 TALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE 576
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ ++P +V TYTT+I G C+ G + A K+F M + PNL Y+++I G C++G+ +
Sbjct: 577 QGLLP-NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 635
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA++ M+E+ GC P TY+ ++ GLC GR EA+ L+ M+ GF + + S+L
Sbjct: 636 EAER-MSEI---GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL 691
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
C + D A+ ++ + Y +I CK G+ +EA +L M +
Sbjct: 692 IAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWN 751
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-GRMQDVE 422
+ + L++ GELD + LL M + PN +Y +I G +++ G+ + E
Sbjct: 752 ADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY--VILGRELSRIGKSIESE 809
Query: 423 DLVDRM 428
L D++
Sbjct: 810 PLADKL 815
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 158/318 (49%), Gaps = 17/318 (5%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLI 130
A F+F NPN YTA+ D + IA SLLK ++ + + +
Sbjct: 497 ASFYFQEMVECGLNPNPVS-----YTALIDGHSKDGKVDIALSLLK---RMEEMGCNPNV 548
Query: 131 KAYGDRGNVKAAIFWFHQAKQI-----ENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
++Y N + F +A++I E G + +Y +L+ L R + A + FH
Sbjct: 549 ESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD 608
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELE 243
+ K +P ++ TY+++I G C+ G + A+++ ++ +P L Y+T+++G C+KG
Sbjct: 609 MEKRKCLP-NLYTYSSLIYGLCQEGKADEAERMSEI-GCEPTLDTYSTLVSGLCRKGRFY 666
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA++ + +M RG P+ Y +++ C N VD A + + GF+ ++S +++++
Sbjct: 667 EAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALI 726
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC G+ ++A N++E N D + V+++G K G+ D + LL M ++
Sbjct: 727 CALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFT 786
Query: 364 PTVFSFNAVFRILVENGE 381
P + ++ + R L G+
Sbjct: 787 PNIQTYVILGRELSRIGK 804
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 187/410 (45%), Gaps = 38/410 (9%)
Query: 67 NPYHALFFFNWASNPNPNPNKYHHTTPC----YTAITD---VLLSHSLISIAASLLKNSN 119
N L F N++S P+ + H P + AI +LS ++ L + S
Sbjct: 15 NHSSVLGFLNFSSKPHISS---HFAVPASREPFQAIVSRVCAILSRVQWKGSSELKQLSP 71
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+L +++++ + D +V +W + + ++ N + +L R
Sbjct: 72 QLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYK-----HNMNCFISMLNR--------- 117
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV------MTVKPNLLAYNTMI 233
+V++ V P MI+ C+ E ++V D M +L + NT++
Sbjct: 118 ----LVRDRVFAPADHIRILMIKA-CRNE--EEIRRVADFLNEISGMGFGFSLYSCNTLL 170
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
K +E A+ +M+N G +P+ LT+N +I L G+V EA+++++++
Sbjct: 171 IQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLS 230
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+V T+ S++ G C D A G +++ +P+ +Y +ING C G+ DEA+ +
Sbjct: 231 PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDM 290
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
L+EM +G++PTV+++ L + AI L+ +M + C PN +Y +I GL
Sbjct: 291 LEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR 350
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G+++ L +M++ G + Y+ L+ C G ++I H M
Sbjct: 351 L-GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 146 FHQAKQI-----ENGACLYS--YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
F++A+Q+ E G C Y SLL + + A + FH I + +S Y
Sbjct: 665 FYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGF-QLHLSIYR 723
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
+I CK G +E A+ +FD M K + + + +++G K+GEL+ K ++ M ++
Sbjct: 724 ALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESK 783
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
PN TY + L G+ E++ L K+++
Sbjct: 784 NFTPNIQTYVILGRELSRIGKSIESEPLADKLKV 817
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 169/309 (54%), Gaps = 5/309 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ LI+A+ + V A Q+ + C ++N L+ + + E H ++
Sbjct: 230 VGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMI 289
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
+N PD+ TY +I G+CK M A +VF+ + + P+++ Y T+I+GFCK G+L
Sbjct: 290 VKNR-NPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQL 348
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E+A K EM+++G PNE +YN +IYG C G +DEA L KM +G+K+ + ++
Sbjct: 349 EDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTL 408
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC+ G+ D+A + R + N+ DV +Y +I GFC+ GK ++ LLKE++A+GL
Sbjct: 409 ILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGL 468
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+P+ S+ + + L + G + A + M P + + II GLC ++ +E
Sbjct: 469 QPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGME 528
Query: 423 DLVDRMIRS 431
L+ M++S
Sbjct: 529 WLI-TMLKS 536
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 3/230 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+K+ PD+ YTT+I G+CKMG +E+A K++ M K PN +YNT+I GFCK G
Sbjct: 323 LKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGN 382
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L+EA K +M++ G + L+ N +I GLC++GR DEA +M +V T+ +
Sbjct: 383 LDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNT 442
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+++G C GK Q+ L+ + + P SY +I C++G EA + +M RG
Sbjct: 443 LIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRG 502
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L+P V + + + L E G + + L M + + P ++ +I L
Sbjct: 503 LQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSL 552
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 207/462 (44%), Gaps = 17/462 (3%)
Query: 8 LTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTN 67
L N++Q D S + + VI R P+ +S P F + ++++ + N
Sbjct: 48 LLNLTQRKDVSEIAAEVGKVI-RSKPRWEQSL-LSDYPSFNFH---DPSFFSELLKQLNN 102
Query: 68 PYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFIS 127
+ +L FF W S+ P H C +L + + + + L +
Sbjct: 103 VFLSLRFFLWLSS---QPEFLPHPVSCNKLFDALLEAKACVPAKSFLYSFEFSPEPASLE 159
Query: 128 KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
I+ + G V+ A++ F K+ + ++N ++ L + + +++
Sbjct: 160 NYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMET 219
Query: 188 NVVPP-DVSTYTTMIRGYCKMGMIENAKKVF-----DVMTVKPNLLAYNTMINGFCKKGE 241
V D+ T +I+ +C + A ++ D +T P A+N +I+GFCK+
Sbjct: 220 GVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLT--PCNDAFNKLISGFCKEKN 277
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ ++ M+ + P+ TY +I G C N +A + ++ G+ ++ + +
Sbjct: 278 HHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTT 337
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C +G+ + A +++ P+ SY +I GFCKIG DEA+ L K+M G
Sbjct: 338 LIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSG 397
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
K T S N + L +G D A ++MP + + + ++YNT+I G C +G++
Sbjct: 398 YKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFC-REGKVLQS 456
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
DL+ + G + Y+ L++ C+ G+V+ ++ ++M
Sbjct: 457 TDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDM 498
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 114/227 (50%), Gaps = 10/227 (4%)
Query: 127 SKLIKAYGDRGNVK-AAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ LI + G ++ A+ WF + I+ G YSYN+L+ ++ ++ A + + +
Sbjct: 336 TTLIHGFCKMGQLEDASKLWF---EMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKK 392
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKG 240
++ +S T+I G C G + A F M K +++ YNT+I GFC++G
Sbjct: 393 MLDSGYKETTLSC-NTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREG 451
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++ ++ + E+ +G +P+ +Y +I LC G V EAK + M G + V T
Sbjct: 452 KVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRD 511
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
++ GLC G + + +L ++++N+ P +++ +I +IGK
Sbjct: 512 HIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIGKE 558
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 123/300 (41%), Gaps = 3/300 (1%)
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNL 226
+L ++N++ L+ FF + + P + + + AK P
Sbjct: 96 LLKQLNNVFLSLRFFLWLSSQPEFLPHPVSCNKLFDALLEAKACVPAKSFLYSFEFSPEP 155
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
+ I C+ G +EEA + + G RP T+N GR D L
Sbjct: 156 ASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEG 215
Query: 287 MRLNGFKDNV--STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G + +V T +++ C K +A LR +E + P ++ +I+GFCK
Sbjct: 216 MMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKE 275
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
+ L+ M + P +F++ + +N +A + + P+ V Y
Sbjct: 276 KNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMY 335
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
T+I G C G+++D L MI G + Y+ L+ G+C+ GN++ M++ +M+
Sbjct: 336 TTLIHGFC-KMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKML 394
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/504 (25%), Positives = 219/504 (43%), Gaps = 67/504 (13%)
Query: 17 QSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFN 76
QS+ + +I+ ++ + + P ++P L + + ++++ L FF
Sbjct: 16 QSLSIPTISELLSKQHWSELKPHLRVTKPATFLDQLLNAGVDSELV---------LRFFK 66
Query: 77 WAS---------NPNPNPNKYHHTTPCYTAITDVLLS------HSLISIAASLLKNSNK- 120
W+ P + + Y+ + L S H++ S+ SLL + +
Sbjct: 67 WSQKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRP 126
Query: 121 -LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+ I L+ AY + A F +AK L S N LL LV+ N I E
Sbjct: 127 GATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEY 186
Query: 180 FFHQIVKENV----------------------------------VPPDVSTYTTMIRGYC 205
+ +++K + + P+V TY T++ GYC
Sbjct: 187 VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYC 246
Query: 206 KMGMIENAKKVFDVMT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
K G K M + PN + +NT+I+GFCK + AKK EM +G +P
Sbjct: 247 KRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKP 306
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N +TYN++I GLC NG+++EA L KM G K N+ T+ +++ G C +A
Sbjct: 307 NIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVF 366
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+V + + P+V ++ +I+ +CK G +E SL M G+ P V ++N + L
Sbjct: 367 DDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRK 426
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
+L A LL +M + V+YN +I GLC + ++ E L++ M G +
Sbjct: 427 QDLQAAKELLNEMENKGLKGDVVTYNILIDGLC-KNDKSRNAEKLLNEMFNLGLKPNHVT 485
Query: 440 YSCLLKGYCEEGNVENVMQIAHEM 463
Y+ L+ GYC EG ++ + + M
Sbjct: 486 YNTLMDGYCMEGKLKAALNVRTRM 509
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 175/348 (50%), Gaps = 21/348 (6%)
Query: 129 LIKAYGDRGNV----KAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFH 182
L+ Y RG+ KA F + + N C ++N+L+ + ++ A++ F
Sbjct: 241 LVDGYCKRGSAGKMYKAEAF---MKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFE 297
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
++ K+ + P++ TY ++I G C G +E A ++D M +KPN++ YN +INGFCKK
Sbjct: 298 EMQKQGL-KPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKK 356
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
++EA K +++ + PN +T+N MI C G ++E L + M G NVST+
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 416
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ GLC A L + + DV +Y ++I+G CK KS A LL EM
Sbjct: 417 NCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 476
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
GLKP ++N + G+L A+ + +M + PN V+YN +I G C +++
Sbjct: 477 LGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKI-NKLE 535
Query: 420 DVEDLVDRMIRSGHNLDFTMYSC-----LLKGYCE--EGNVENVMQIA 460
L++ M+ G N + T Y L KG+ EG++ N+ ++
Sbjct: 536 AANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPDIEGHLYNISSMS 583
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 203/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ +CK G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L E + N M G +P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNS 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
+ +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEM 407
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 185/378 (48%), Gaps = 38/378 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F S +I G + A+ F + + + YN L+ ++ K+A + + +
Sbjct: 185 FSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDK 244
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKG 240
+++++ V P+V T+ MI G K G +++ K++D M + +L Y+++I+G C +G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEG 304
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI--------------------------- 273
+++A+ NE++ R + +TYN M+ G C
Sbjct: 305 NVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNI 364
Query: 274 -------NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
NG++DEA M+ M G+ + +T+ + GLCV G ++A+G ++ V
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKG 424
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ DV +Y +I+ CK + +EA +L+KEM G++ NA+ L+ + L A
Sbjct: 425 GHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDAS 484
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
LL++ M + CLP VSYN +ICGLC A G+ + V M+ +G D YS LL G
Sbjct: 485 LLMRGMGKNGCLPTVVSYNILICGLCEA-GKFGEASAFVKEMLENGLKPDLKTYSILLGG 543
Query: 447 YCEEGNVENVMQIAHEMV 464
C + +E +++ H+ +
Sbjct: 544 LCRDRKIELALELWHQFL 561
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 172/373 (46%), Gaps = 42/373 (11%)
Query: 115 LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+K + + D + S LI D GNV A F++ + + + +YN++LG R
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGK 340
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP--------- 224
IK + E + + + N V ++ +Y +I+G + G I+ A ++ +M K
Sbjct: 341 IKESLELWRIMEQRNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYG 398
Query: 225 -----------------------------NLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
++ AY ++I+ CKK LEEA + EM
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKH 458
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G N NA+I GL + R+ +A +LM M NG V ++ ++ GLC GKF +A
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEA 518
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+++ ++E + PD+K+Y +++ G C+ K + A+ L + GL+P V N +
Sbjct: 519 SAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHG 578
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L G+LD A+ ++ M +C N V+YNT++ G + + + M + G
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNR-ATVIWGYMYKMGLQP 637
Query: 436 DFTMYSCLLKGYC 448
D Y+ +LKG C
Sbjct: 638 DIISYNTILKGLC 650
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 133/282 (47%), Gaps = 6/282 (2%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF----DVMTVKPNLLAYNTMINGFCK 238
++++ D ++I+ Y K M + A VF ++ +P + +YNT++N F +
Sbjct: 67 ELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVE 126
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ + + G PN TYN +I C ++A+ + M GFK +V +
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFS 186
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL-KEM 357
+ +++ L GK D A+ + E + PDV Y ++I+GF K A+ L K +
Sbjct: 187 YSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLL 246
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ P V + N + L + G +D + + +M Q + + +Y+++I GLC +G
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLC-DEGN 305
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ E + + ++ +D Y+ +L G+C G ++ +++
Sbjct: 306 VDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLEL 347
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 111/219 (50%), Gaps = 4/219 (1%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
N+L+G L+R + + A + K +P VS Y +I G C+ G A M
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVS-YNILICGLCEAGKFGEASAFVKEML 526
Query: 221 --TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+KP+L Y+ ++ G C+ ++E A + ++ + G P+ + +N +I+GLC G++D
Sbjct: 527 ENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLD 586
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A +MA M N+ T+ ++++G V ++A + + + PD+ SY ++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTIL 646
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
G C + AI + R G+ PTV+++N + R +V
Sbjct: 647 KGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 120/254 (47%), Gaps = 4/254 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y S++ L + ++ A ++ K V + +I G + + +A +
Sbjct: 429 VYAYASIIDCLCKKRRLEEASNLVKEMSKHGV-ELNSHVCNALIGGLIRDSRLSDASLLM 487
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M P +++YN +I G C+ G+ EA + EM+ G +P+ TY+ ++ GLC +
Sbjct: 488 RGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRD 547
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+++ A L + +G + +V H ++ GLC VGK D A+ + N+ N ++ +Y
Sbjct: 548 RKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++ G+ K+ S+ A + M GL+P + S+N + + L + AI
Sbjct: 608 NTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARN 667
Query: 395 MDCLPNFVSYNTII 408
P ++N ++
Sbjct: 668 HGIFPTVYTWNILV 681
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 155/293 (52%), Gaps = 10/293 (3%)
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFC 237
F + ++ N P+V TY TMI GYCK+ + A M +K PNL+ +N +ING C
Sbjct: 5 FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+ G L+E + + EM +G P+E+TYN ++ G C G +A +L A+M NG NV
Sbjct: 65 RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ S++ +C G ++A+ + + + P+ ++Y +INGF + G DEA +L EM
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
G P++ ++NA+ G ++ AI LL+ M LP+ VSY+TII G R
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGF----AR 240
Query: 418 MQDVEDLVD---RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
Q+++ MI D YS L++G CE+ + + EM+T K
Sbjct: 241 NQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 179/356 (50%), Gaps = 24/356 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L+ Y GN A+ A+ + NG + +Y SL+ + + ++ A EFF Q+
Sbjct: 94 LVNGYCKEGNFHQALVL--HAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHV 151
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ P + TYTT+I G+ + G+++ A +V + MT P+++ YN +ING C G +E
Sbjct: 152 RGLCPNE-RTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRME 210
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +M+ +G P+ ++Y+ +I G N +D A + +M + T+ S++
Sbjct: 211 EAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLI 270
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+GLC + +A + ++ + PD +Y +IN +CK G ++A+ L EM +G
Sbjct: 271 QGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFL 330
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII---C----------- 409
P ++N + L + A LL ++ D +P+ V+YNT+I C
Sbjct: 331 PDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALV 390
Query: 410 -GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G CM KG M + + + + MI H + +Y+ ++ G+C GNV ++ EMV
Sbjct: 391 KGFCM-KGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMV 445
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 155/292 (53%), Gaps = 5/292 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++N ++ L R +K E ++ ++ VP +V TY T++ GYCK G A +
Sbjct: 53 LITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEV-TYNTLVNGYCKEGNFHQALVLH 111
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + PN++ Y ++IN CK G L A + ++M RG PNE TY +I G
Sbjct: 112 AEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQ 171
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +DEA ++ +M +GF ++ T+ +++ G CV+G+ ++A+G L++++ + PDV SY
Sbjct: 172 GLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSY 231
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+GF + + D A + EM + + P +++++ + L E L A + ++M
Sbjct: 232 STIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLT 291
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+ P+ +Y T+I C +G + L D MI+ G D Y+ L+ G
Sbjct: 292 IKLPPDEFTYTTLINAYC-KEGDLNKALHLHDEMIQKGFLPDAVTYNVLING 342
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 154/307 (50%), Gaps = 25/307 (8%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-D 218
SY++++ R + A + +++ ++V+P D TY+++I+G C+ + A +F +
Sbjct: 230 SYSTIISGFARNQELDRAFQMKVEMIGKSVLP-DAVTYSSLIQGLCEQRRLTEACDMFQE 288
Query: 219 VMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
++T+K P+ Y T+IN +CK+G+L +A +EM+ +G P+ +TYN +I GL R
Sbjct: 289 MLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQAR 348
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
EA+ L+ K+ + + T+ ++++ C N + KS
Sbjct: 349 SKEARRLLLKLFYDDSIPSAVTYNTLIENCC--------------------NIEFKSAVA 388
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ GFC G DEA + + M + KP +N + G + +A L K+M +D
Sbjct: 389 LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVD 448
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+P+ V+ ++ L +G ++ +++ ++RS D + L++ +EGN++ V
Sbjct: 449 FVPHTVTVLALVKAL-FTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMV 507
Query: 457 MQIAHEM 463
+ EM
Sbjct: 508 FNLLTEM 514
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 112/269 (41%), Gaps = 55/269 (20%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L + A + F +++ + PPD TYTT+I YCK G + A + D
Sbjct: 265 TYSSLIQGLCEQRRLTEACDMFQEMLTIKL-PPDEFTYTTLINAYCKEGDLNKALHLHDE 323
Query: 220 MTVK---PNLLAYNTMING----------------------------------------- 235
M K P+ + YN +ING
Sbjct: 324 MIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEF 383
Query: 236 ---------FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
FC KG ++EA + M+N+ +PNE YN +I+G C G V +A L +
Sbjct: 384 KSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKE 443
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M F + T +++K L G + + +++ + D + +V++ K G
Sbjct: 444 MVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGN 503
Query: 347 SDEAISLLKEMRARGLKPTVFS-FNAVFR 374
D +LL EM GL P+ + NA+ R
Sbjct: 504 MDMVFNLLTEMAKDGLIPSTGTPTNAIAR 532
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 176/309 (56%), Gaps = 17/309 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ + + + A + + ++V + + PDV TY+ +IRG+ +G +++A +F+ M
Sbjct: 211 YNTVIDGMSKDKHVNDAFDLYSEMVAKRI-SPDVVTYSALIRGFFIVGKLKDAIDLFNKM 269
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+KP++ +N +++GFCK+G L++AK ++ MM + +PN T+N ++ G C + ++
Sbjct: 270 ILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKM 329
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
E K + A M G K NV T+ S++ G C+V + ++A + + + +V SY ++
Sbjct: 330 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIM 389
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
INGFCKI K D+A+ L EM + + P V ++N++ L ++G++ A L+ +M
Sbjct: 390 INGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQ 449
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN ++YN+I+ L + L D+ I+ + D + L+KG C+ G +E
Sbjct: 450 PPNIITYNSILNAL---------LTKLKDQGIQPNMHTD----TILIKGLCQSGKLEAAR 496
Query: 458 QIAHEMVTK 466
++ +++ K
Sbjct: 497 KVFEDLLVK 505
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 183/375 (48%), Gaps = 8/375 (2%)
Query: 95 YTAITDVLLSHSL---ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQ 151
Y++I+ S+ + +S+ SLL + L+ F +K++ + + + Q +
Sbjct: 37 YSSISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEF 96
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
++N L+ ++ I A +I+K PD+ T T I+G+C G I
Sbjct: 97 EGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGY-EPDIITLNTFIKGFCLKGQIH 155
Query: 212 NAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
A D + + ++Y T+ING CK GE A + + + + + N + YN +I
Sbjct: 156 QALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVI 215
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
G+ + V++A L ++M +V T+ ++++G +VGK A+ ++ N+
Sbjct: 216 DGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIK 275
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PDV ++ ++++GFCK G+ +A ++L M + +KP V +FN + ++ ++ +
Sbjct: 276 PDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTV 335
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
M + PN V+Y +++ G C+ K ++ + + + M + G + Y+ ++ G+C
Sbjct: 336 FAMMMKQGIKPNVVTYCSLMDGYCLVK-QVNKAKKIFNTMSQRGVTANVHSYNIMINGFC 394
Query: 449 EEGNVENVMQIAHEM 463
+ V+ M++ EM
Sbjct: 395 KIKKVDKAMKLFIEM 409
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 2/164 (1%)
Query: 305 GLCVVGKFDQAVGYLRNVME-ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G V K V L ME +NP+ ++ ++IN FC++G A S+L ++ G +
Sbjct: 76 GSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYE 135
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + + N + G++ +A+ ++ + + VSY T+I GLC G +
Sbjct: 136 PDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKV-GETRAALQ 194
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
L+ R+ L+ MY+ ++ G ++ +V + + EMV K+
Sbjct: 195 LLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKR 238
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 71/129 (55%), Gaps = 16/129 (12%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
A ++SYN ++ ++ + A + F ++ ++++ PDV TY ++I G CK G I A +
Sbjct: 381 ANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHII-PDVVTYNSLIDGLCKSGKISYAFQ 439
Query: 216 VFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ + M + PN++ YN+++N + ++ ++G +PN T +I GLC
Sbjct: 440 LVNEMHDRGQPPNIITYNSILNAL------------LTKLKDQGIQPNMHTDTILIKGLC 487
Query: 273 INGRVDEAK 281
+G+++ A+
Sbjct: 488 QSGKLEAAR 496
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 165/316 (52%), Gaps = 13/316 (4%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+YNSL+ L ++ I A E H +V + P+ TY T+I CK +E A ++
Sbjct: 337 VYTYNSLISGLCKLGEIDEAVEILHHMVSRDC-EPNTVTYNTLIGTLCKENHVEAATELA 395
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
V+T K P++ +N++I G C E A + EM +GC P+E TY+ +I LC
Sbjct: 396 RVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSE 455
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+ EA ML+ +M L+G NV + +++ GLC + A + ++ +Y
Sbjct: 456 RRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTY 515
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ING CK + +EA L+ +M GLKP F++ + + + G++ RA +++ M
Sbjct: 516 NTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTL 575
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS----GHNLDFTMYSCLLKGYCEE 450
C P+ V+Y T+I GLC A GR+ D+ +++RS G L Y+ +++ C+
Sbjct: 576 NGCEPDIVTYGTLIGGLCKA-GRV----DVASKLLRSVQMKGMVLTPQAYNPVIQALCKR 630
Query: 451 GNVENVMQIAHEMVTK 466
+ M++ EM+ K
Sbjct: 631 KRTKEAMRLFREMMEK 646
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 176/343 (51%), Gaps = 11/343 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ L++ + + +V+ A+ + +E+G L S N L+ L + I+ A F I
Sbjct: 238 TTLMQGFIEEADVEGALRI--KELMVESGCELTSVSVNVLVNGLCKEGRIEEALRF---I 292
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGE 241
+E PD T+ ++ G C+ G I+ ++ D M K ++ YN++I+G CK GE
Sbjct: 293 YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGE 352
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++EA + ++ M++R C PN +TYN +I LC V+ A L + G +V T S
Sbjct: 353 IDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNS 412
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+++GLC+ + A+ + E +PD +Y ++I C + EA+ LLKEM G
Sbjct: 413 LIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSG 472
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
V +N + L +N + A + QM + + V+YNT+I GLC +K R+++
Sbjct: 473 CARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSK-RVEEA 531
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L+D+MI G D Y+ +LK +C++G+++ I M
Sbjct: 532 AQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMT 574
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 187/404 (46%), Gaps = 40/404 (9%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+L+ +L + + LI G + A+ H + +YN+L+G L + N
Sbjct: 328 MLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENH 387
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP--------- 224
++ A E + + V+P DV T+ ++I+G C E A ++F+ M K
Sbjct: 388 VEAATELARVLTSKGVLP-DVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYS 446
Query: 225 -----------------------------NLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
N++ YNT+I+G CK + +A+ ++M
Sbjct: 447 ILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEML 506
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G + +TYN +I GLC + RV+EA LM +M + G K + T+ +MLK C G +A
Sbjct: 507 GVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRA 566
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
++N+ PD+ +Y +I G CK G+ D A LL+ ++ +G+ T ++N V +
Sbjct: 567 ADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQA 626
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L + A+ L ++M + P+ ++Y + GLC G +Q+ D M+ G
Sbjct: 627 LCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILP 686
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTR 479
+F + L +G C + ++Q+ + MV +KGR + + + R
Sbjct: 687 EFPSFGFLAEGLCSLSMEDTLIQLIN-MVMEKGRFSQSETSIIR 729
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 162/383 (42%), Gaps = 41/383 (10%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS-YNSLLGVLVRVNSIKLAEEFF 181
DF S+L+ + + +A+ F A N + S ++ LL L R S
Sbjct: 56 DFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLL 115
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIE-NAKKVFDVM----TVKPNLLAYNTMINGF 236
Q+ + +P D ST+ + Y + +F +M VKP+ YN ++
Sbjct: 116 RQM-HSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLL 174
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K +L+ + ++M+ P+ T+N +I LC ++ A +++ M G + +
Sbjct: 175 VKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDE 234
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T ++++G + A+ ++E+ S V++NG CK G+ +EA+ + E
Sbjct: 235 KTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE 294
Query: 357 ---------------------------------MRARGLKPTVFSFNAVFRILVENGELD 383
M +G + V+++N++ L + GE+D
Sbjct: 295 EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEID 354
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A+ +L M DC PN V+YNT+I LC + ++ +L + G D ++ L
Sbjct: 355 EAVEILHHMVSRDCEPNTVTYNTLIGTLC-KENHVEAATELARVLTSKGVLPDVCTFNSL 413
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
++G C N E M++ EM K
Sbjct: 414 IQGLCLTSNREIAMELFEEMKEK 436
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 166/313 (53%), Gaps = 5/313 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y ++L + A +F ++ ++ + D TYTTMI G C+ +E A+K+ M
Sbjct: 364 YTTVLSGFCNKGDLVSARRWFDEMQRKGLAT-DGVTYTTMINGLCRAVELEEAEKLLQEM 422
Query: 221 TVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ + + Y +I+G+CK+G++ EA + N M+ RG PN +TY A+ GLC G V
Sbjct: 423 WARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDV 482
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A L+ +M G + N T+ S++ GLC G +QA+ + ++ A + PDV +Y +
Sbjct: 483 QAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTL 542
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ CK G D A SLL+EM +G+KPT+ ++N + +G ++ LL M + +
Sbjct: 543 IDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNI 602
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +YN+++ C+ + M+ ++ M + Y+ L+KG+C+ N++ +
Sbjct: 603 HPNAATYNSLMKQYCI-ENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEAL 661
Query: 458 QIAHEMVTKKGRL 470
EM+ K RL
Sbjct: 662 YFHDEMIQKGFRL 674
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 155/310 (50%), Gaps = 8/310 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL L +K A + F ++ PDV TY +I G+C +G +ENA K+ D
Sbjct: 261 SYNILLKALCDAGRVKDARQLFDEMASA----PDVVTYGILIHGHCALGELENAVKLLDE 316
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V+PN Y +++ C KG + +A + + +M+ R +E Y ++ G C G
Sbjct: 317 MVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGD 376
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ A+ +M+ G + T+ +M+ GLC + ++A L+ + ++ D +Y V
Sbjct: 377 LVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTV 436
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+CK GK EA + M RG+ P V ++ A+ L + G++ A LL +M
Sbjct: 437 LIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
N +YN++I GLC A Q + + D M + D Y+ L+ C+ G+++
Sbjct: 497 LELNACTYNSLINGLCKAGYLEQAMRTMAD-MDTACLKPDVYTYTTLIDALCKSGDLDRA 555
Query: 457 MQIAHEMVTK 466
+ EM+ K
Sbjct: 556 HSLLQEMLDK 565
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 149/304 (49%), Gaps = 10/304 (3%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N++L L +I+L +E H+ +V +Y +++ C G +++A+++FD M
Sbjct: 236 NAVLSRLPLDEAIELFQELPHK---------NVCSYNILLKALCDAGRVKDARQLFDEMA 286
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
P+++ Y +I+G C GELE A K ++EM+ G PN Y +++ LC G + +A
Sbjct: 287 SAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDAL 346
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
++ M + + + ++L G C G A + + + D +Y +ING
Sbjct: 347 RVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGL 406
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C+ + +EA LL+EM AR L ++ + + G++ A + M Q PN
Sbjct: 407 CRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNV 466
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
V+Y + GLC +G +Q +L+ M G L+ Y+ L+ G C+ G +E M+
Sbjct: 467 VTYTALTDGLC-KQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMA 525
Query: 462 EMVT 465
+M T
Sbjct: 526 DMDT 529
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 134/269 (49%), Gaps = 8/269 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y RG + A F H A ++ G + +Y +L L + ++ A E H++
Sbjct: 437 LIDGYCKRGKMAEA-FQMHNA-MVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELE 243
+ + + TY ++I G CK G +E A + D +KP++ Y T+I+ CK G+L+
Sbjct: 495 KGL-ELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLD 553
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + EM+++G +P +TYN ++ G C++GRV+ K L+ M N +T+ S++
Sbjct: 554 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLM 613
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
K C+ + + ++ P+ +Y ++I G CK EA+ EM +G +
Sbjct: 614 KQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFR 673
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQM 392
T S++A+ R+L + + A L M
Sbjct: 674 LTATSYSALIRLLNKKKKFVEARELFHDM 702
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 181/411 (44%), Gaps = 42/411 (10%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNK----LSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT++ +L IS A ++++ + L + + ++ + ++G++ +A WF + +
Sbjct: 329 YTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQ 388
Query: 151 QIENGACLYSYNSLLGVLVRVNSI---------------------------------KLA 177
+ +Y +++ L R + K+A
Sbjct: 389 RKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMA 448
Query: 178 EEF-FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMI 233
E F H + + V P+V TYT + G CK G ++ A ++ M+ K N YN++I
Sbjct: 449 EAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLI 508
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
NG CK G LE+A + M +M +P+ TY +I LC +G +D A L+ +M G K
Sbjct: 509 NGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIK 568
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ T+ ++ G C+ G+ + L ++E N++P+ +Y ++ +C +
Sbjct: 569 PTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEI 628
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
K MR+R + P ++N + + + + A+ +M Q SY+ +I L
Sbjct: 629 YKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALI-RLLN 687
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
K + + +L M + G + +Y + E N+E+ + + E+V
Sbjct: 688 KKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELV 738
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
LR + + ++P ++ V++ DEAI L +E+ + V S+N + + L +
Sbjct: 220 LRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHK----NVCSYNILLKALCD 271
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
G + A L +M P+ V+Y +I G C A G +++ L+D M+ G + T
Sbjct: 272 AGRVKDARQLFDEMASA---PDVVTYGILIHGHC-ALGELENAVKLLDEMVAGGVEPNAT 327
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+Y+ ++ C++G + + +++ +MV +K
Sbjct: 328 VYTSVVALLCDKGWISDALRVVEDMVQRK 356
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 178/341 (52%), Gaps = 6/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIK + + A+ F + ++ + ++ +LL L + + A +FFHQ+ E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF-ET 178
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P+V T+TT++ G C+ G I A + D M ++P + Y T+++G CKKG+ A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 246 KKCMNEMMN-RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ +M PN + Y+A+I LC +GR +A+ L +M+ G ++ T+ SM+
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C G++ A L+ ++E ++PDV +Y +IN F K GK EA L EM RG+ P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+++++ + LD A + M C PN +++NT+I G C AK R+ D +L
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK-RIDDGMEL 417
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ M +G D T Y+ L+ G+ G++ + + EM++
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 192/389 (49%), Gaps = 20/389 (5%)
Query: 95 YTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y+AI D L S A +L ++ D F + +I + G A +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + + +YN+L+ V+ AEE + +++ ++P + TY++MI G+CK +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI-TYSSMIDGFCKQNRL 376
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ +F +M K PNL+ +NT+I+G+C +++ + ++EM G + TYN +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-- 325
I+G + G ++ A L+ +M +G ++ T ++L GLC GK A+ + + ++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 326 ---------NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ PDV++Y ++I+G GK EA L +EM RG+ P +++++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ LD A + M PN V++ T+I G C A GR+ D +L M R G +
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA-GRVDDGLELFCEMGRRGIVAN 615
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
Y L+ G+ + GN+ + I EM++
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMIS 644
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 166/320 (51%), Gaps = 16/320 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++++ L + A+ F ++ +E + PD+ TY +MI G+C G +A+++ M
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEM-QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ YN +IN F K+G+ EA++ +EM+ RG PN +TY++MI G C R+
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A+ + M G N+ T +++ G C + D + L + E + D +Y +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM----- 392
I+GF +G + A+ LL+EM + GL P + + + + L +NG+L A+ + K M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 393 ------PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
P P+ +YN +I GL + +G+ + E+L + M G D YS ++ G
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGL-INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 447 YCEEGNVENVMQIAHEMVTK 466
C++ ++ Q+ M +K
Sbjct: 556 LCKQSRLDEATQMFDSMGSK 575
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 164/336 (48%), Gaps = 6/336 (1%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V A+ +FHQ + + ++ +L+ L R I A +++++ + P + TY
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI-TYG 223
Query: 199 TMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T++ G CK G +A +K+ +V + PN++ Y+ +I+ CK G +A+ EM
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G P+ TYN+MI G C +GR +A+ L+ +M +V T+ +++ GKF +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A ++ + P+ +Y +I+GFCK + D A + M +G P + +FN +
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+D + LL +M + + + +YNT+I G + G + DL+ MI SG
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV-GDLNAALDLLQEMISSGLC 462
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
D LL G C+ G +++ +++ M K L
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 125/246 (50%), Gaps = 2/246 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ ++ ++N +I FC +L A ++ G P+ +T+ +++GLC+ RV EA
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+M + NV T +++ GLC G+ +AV L +ME + P +Y +++G
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 342 CKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CK G + A++LL++M + P V ++A+ L ++G A L +M + P+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+YN++I G C + GR D E L+ M+ + D Y+ L+ + +EG ++
Sbjct: 290 LFTYNSMIVGFC-SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348
Query: 461 HEMVTK 466
EM+ +
Sbjct: 349 DEMLPR 354
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 15/278 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y + + H+ + A +YN+L+ V + A + +++
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------VKPNLLAYNTMIN 234
+ P D+ T T++ G C G +++A ++F VM V+P++ YN +I+
Sbjct: 461 LCP-DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
G +G+ EA++ EM +RG P+ +TY++MI GLC R+DEA + M F
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
NV T +++ G C G+ D + + + + +Y +I GF K+G + A+ +
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIF 639
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+EM + G+ P + + L EL RA+ +L+++
Sbjct: 640 QEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 139/299 (46%), Gaps = 15/299 (5%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I + + + AA F+ L ++N+L+ I E H++ +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+V D +TY T+I G+ +G + A + M P+++ +T+++G C G+L+
Sbjct: 424 TGLVA-DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 244 EAKKCMNEMMNR-----------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+A + M G P+ TYN +I GL G+ EA+ L +M G
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ T+ SM+ GLC + D+A ++ + +P+V ++ +ING+CK G+ D+ +
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L EM RG+ ++ + + G ++ A+ + ++M P+ ++ ++ GL
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 2/219 (0%)
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M + R + ++N +I C ++ A K+ G +V T ++L GLCV
Sbjct: 103 QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVE 162
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ +A+ + + E P+V ++ ++NG C+ G+ EA++LL M GL+PT ++
Sbjct: 163 DRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222
Query: 370 NAVFRILVENGELDRAILLLKQMPQMD-CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ + + G+ A+ LL++M ++ +PN V Y+ II LC GR D ++L M
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC-KDGRHSDAQNLFTEM 281
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G D Y+ ++ G+C G + Q+ EM+ +K
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 17/245 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI + G++ AA+ + I +G C + + ++LL L +K A E F + K
Sbjct: 436 LIHGFYLVGDLNAALDLLQE--MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Query: 187 E----------NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
N V PDV TY +I G G A+++++ M + P+ + Y++MI
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G CK+ L+EA + + M ++ PN +T+ +I G C GRVD+ L +M G
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
N T+ +++ G VG + A+ + ++ + + PD + ++ G + A+++
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673
Query: 354 LKEMR 358
L++++
Sbjct: 674 LEKLQ 678
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 105/234 (44%), Gaps = 2/234 (0%)
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+GF + LE+A ++M+ P+ + + ++ + R D L KM +
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
++ + ++K C K A+ + + ++PDV ++ +++G C + EA+
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
+M +P V +F + L G + A+ LL +M + P ++Y TI+ G+C
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC- 230
Query: 414 AKGRMQDVEDLVDRMIRSGHNL-DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
KG +L+ +M H + + +YS ++ C++G + + EM K
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+S++ L + + + A + F + ++ P+V T+TT+I GYCK G +++ ++F
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSF-SPNVVTFTTLINGYCKAGRVDDGLELFCE 606
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + N + Y T+I GF K G + A EM++ G P+ +T M+ GL
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666
Query: 277 VDEAKMLMAKMRLN 290
+ A ++ K++++
Sbjct: 667 LKRAVAMLEKLQMS 680
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 182/399 (45%), Gaps = 49/399 (12%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI ++ RG + AI + + + +Y YNSL+ ++ + A+ +F +++
Sbjct: 231 SILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMID 290
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ + P V TYT++I GYC G A KV++ MT K PN + +I+G C+ +
Sbjct: 291 KGLTPT-VVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMA 349
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + EM R P+E+TYN MI G C +G + EA L+ +M GF + T++ ++
Sbjct: 350 EAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLI 409
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS----------- 352
GLC VG+ +A ++ ++ + + + Y +++G+CK G+ +A+S
Sbjct: 410 SGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVA 469
Query: 353 ------------------------LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
LLKEM GL+P + + + G L A L
Sbjct: 470 MDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGL 529
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
M CLPN V+Y +I GLC A G M E L + S + Y C L
Sbjct: 530 WDIMVDEGCLPNVVTYTALINGLCKA-GLMDKAELLSKETLVSDVTPNHITYGCFLDHLT 588
Query: 449 EEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLM 487
GN+E +Q+ H M LK FL V +L+
Sbjct: 589 RGGNMEKAVQLHHAM---------LKGFLATTVSYNILI 618
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 156/368 (42%), Gaps = 64/368 (17%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
++LL L+R F IV NV PD+ Y+ ++R C++ AK++ M
Sbjct: 100 SALLNGLLRFRRFNDVLLLFDDIVSANV-QPDIYIYSAVVRSLCELKDFNKAKEMIHWME 158
Query: 222 V---KPNLLAYNTMINGFCKK--------------------------GELEEAKKCMNEM 252
K +++ YN +I+G CK G+ EA+ EM
Sbjct: 159 FNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEM 218
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+G N +TY+ +I C G +D A + KM + V + S++ G C +G
Sbjct: 219 GEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNA 278
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
A Y +++ + P V +Y +I+G+C G+ +A + EM A+G+ P ++F A+
Sbjct: 279 SAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAI 338
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK----------------- 415
L + AI L +M + +P+ V+YN +I G C +
Sbjct: 339 ISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGF 398
Query: 416 -----------------GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
GR+ + ++ VD + + H L+ YS L+ GYC+EG ++ +
Sbjct: 399 VPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVS 458
Query: 459 IAHEMVTK 466
MV +
Sbjct: 459 ACRVMVER 466
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 189/418 (45%), Gaps = 22/418 (5%)
Query: 63 YEQTNPYHALF-FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKL 121
Y +H F +N + +PN Y +TAI L ++++ A L +
Sbjct: 307 YCNEGEWHKAFKVYNEMTAKGISPNTY-----TFTAIISGLCRANMMAEAIRLFGEMKER 361
Query: 122 ----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSI 174
S+ + +I+ + GN+ A FH ++ + Y+Y L+ L V +
Sbjct: 362 KIMPSEVTYNVMIEGHCRSGNISEA---FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRV 418
Query: 175 KLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNT 231
A+EF + K++ ++ Y+ ++ GYCK G ++A VM V +L+ Y
Sbjct: 419 SEAKEFVDDLHKDHHKLNNM-CYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAI 477
Query: 232 MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG 291
+I+G ++ + + EM N G RP+ + Y MI G + EA L M G
Sbjct: 478 LIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEG 537
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
NV T+ +++ GLC G D+A + + +++ P+ +Y ++ + G ++A+
Sbjct: 538 CLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAV 597
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L M +G T S+N + R G+++ A LL M D LP++++Y+TII
Sbjct: 598 QLHHAM-LKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQ 656
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
C + +Q+ L M+ G D YS L+ G C G +E ++ EM+ + R
Sbjct: 657 C-KRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMR 713
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 137/295 (46%), Gaps = 9/295 (3%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRV 171
L K+ +KL++ S L+ Y G K A+ +E G L Y L+ R
Sbjct: 428 LHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRV--MVERGVAMDLVCYAILIDGTARE 485
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLA 228
+ + ++ + + PD YT MI + K G ++ A ++D+M + PN++
Sbjct: 486 HDTRALFGLLKEM-HNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVT 544
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y +ING CK G +++A+ E + PN +TY + L G +++A L M
Sbjct: 545 YTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM- 603
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
L GF ++ +++G C +GK ++A L + + ++ PD +Y +I CK
Sbjct: 604 LKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQ 663
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
EAI L M +GLKP +++ + GEL++A L +M + N V+
Sbjct: 664 EAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 83/145 (57%), Gaps = 5/145 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y L L R +++ A + H ++K + VS Y +IRG+C++G IE A K+
Sbjct: 579 TYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVS-YNILIRGFCRLGKIEEATKLLHG 636
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT + P+ + Y+T+I CK+ L+EA K + M+++G +P+ L Y+ +++G CI G
Sbjct: 637 MTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGE 696
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKS 301
+++A L +M G + N T KS
Sbjct: 697 LEKAFELRDEMIRRGMRSNHVTPKS 721
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P T +A++ GL R ++ +L + + ++ + ++++ LC + F++A
Sbjct: 94 PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153
Query: 319 LRNVMEANM-NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
+ + ME N + Y V+I+G CK + EA+ + + +GL+ V ++
Sbjct: 154 I-HWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY------- 205
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
G+ + A LL K+M + N ++Y+ +I C +G M + +D+M ++
Sbjct: 206 --GKFNEAELLFKEMGEKGLCANHITYSILIDSFC-RRGEMDNAIGFLDKMTKASIEFTV 262
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+ GYC+ GN EM+ K
Sbjct: 263 YPYNSLINGYCKLGNASAAKYYFDEMIDK 291
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 181/353 (51%), Gaps = 21/353 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ ++ L +N + A +I+K PD +T+TT+IRG C G I A +F
Sbjct: 105 VYTLAIVINSLCHLNRVDFAFSALAKILKLGH-QPDATTFTTLIRGLCVEGKIGEALHLF 163
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +PN++ Y T+ING CK G A + + M C+PN + ++ +I LC +
Sbjct: 164 DKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKD 223
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+V EA + ++M G N+ T+ S++ GLC + ++ + ++++ + PDV +
Sbjct: 224 RQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 283
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V++ CK G EA ++ M RG++P V ++NA+ E+D A+ + M
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
DC+ N +SYNT+I G C ++Q V+ L + M R + Y+ L+ G C G
Sbjct: 344 KDCVANVISYNTLINGYC----KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVG 399
Query: 452 NVENVMQIAHEMVTKKGRLLKLKNFLT--------RVVD-ALLLMWIVTGGSW 495
+++ + + HEMV +G++ L + T R +D A+ L+ + G +W
Sbjct: 400 RLQDAISLFHEMVA-RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 174/341 (51%), Gaps = 11/341 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI GN AAI + +E G C + +++L+ L + + A F +++
Sbjct: 181 LINGLCKVGNTSAAIRLL---RSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMI 237
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ + P++ TY ++I G CK+ ++ + + M + P++ NT+++ CK+G +
Sbjct: 238 TKGI-SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMV 296
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA ++ M++RG PN +TYNA++ G C+ VD A + M NV ++ ++
Sbjct: 297 AEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTL 356
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G C + D+A+ + + P+ +Y +I+G C +G+ +AISL EM ARG
Sbjct: 357 INGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQ 416
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P + ++ + L +N LD+A+ LLK + + P+ Y TI+ G+C A G ++D
Sbjct: 417 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA-GELEDAR 475
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
DL + G + Y+ ++ G C++G + ++ EM
Sbjct: 476 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 170/310 (54%), Gaps = 5/310 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++ N+++ L + + A + ++ V P+V TY ++ G+C ++ A KVF
Sbjct: 280 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV-EPNVVTYNALMDGHCLRNEVDVAVKVF 338
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M K N+++YNT+ING+CK +++A EM + PN +TYN +I+GLC
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+ +A L +M G ++ T++++ LC D+A+ L+ + +N +PD++ Y
Sbjct: 399 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 458
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++G C+ G+ ++A L + ++GL+P V+++N + L + G L A L +M +
Sbjct: 459 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C PN +YN I G ++ +E L++ M+ G ++D + + L+ ++G +
Sbjct: 519 NGCSPNDCTYNLITRGFLRNNEALRTIE-LLEEMLARGFSVDVSTTTLLVGMLSDDGLDQ 577
Query: 455 NVMQIAHEMV 464
+V QI ++V
Sbjct: 578 SVKQILCKIV 587
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 155/312 (49%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YNSL+ L ++ K +++V ++P DV T T++ CK GM+ A V
Sbjct: 245 IVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP-DVFTLNTVVDALCKEGMVAEAHDVV 303
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D+M V+PN++ YN +++G C + E++ A K + M+++ C N ++YN +I G C
Sbjct: 304 DMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKI 363
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
VD+A L +M N T+ +++ GLC VG+ A+ ++ PD+ +Y
Sbjct: 364 QSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTY 423
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ + CK D+A++LLK + P + + + + GEL+ A L +
Sbjct: 424 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 483
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN +YN +I GLC +G + + L M ++G + + Y+ + +G+
Sbjct: 484 KGLQPNVWTYNIMIHGLC-KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 542
Query: 455 NVMQIAHEMVTK 466
+++ EM+ +
Sbjct: 543 RTIELLEEMLAR 554
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 153/310 (49%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM---GMIENAKKV 216
S+N+ + N++ A F++++ + PP + ++ K + + +
Sbjct: 37 SHNTFHSKPLHFNTLDEALSTFNRMLHKQP-PPSTVDFNRLLTSIAKTKHHSTLLSLSRQ 95
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
D + P++ +IN C ++ A + +++ G +P+ T+ +I GLC+ G+
Sbjct: 96 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L KM GF+ NV T+ +++ GLC VG A+ LR++ + N P+V +
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ CK + EA ++ EM +G+ P + ++N++ L + E L+ +M
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+P+ + NT++ LC +G + + D+VD MI G + Y+ L+ G+C V+
Sbjct: 276 IMPDVFTLNTVVDALC-KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334
Query: 457 MQIAHEMVTK 466
+++ MV K
Sbjct: 335 VKVFDTMVHK 344
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 38/225 (16%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y +V A++ F + + E +YN+L+ L V ++ A FH++V
Sbjct: 356 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 415
Query: 189 VVP----------------------------------PDVSTYTTMIRGYCKMGMIENAK 214
+P PD+ YTT++ G C+ G +E+A+
Sbjct: 416 QIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDAR 475
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+F ++ K PN+ YN MI+G CK+G L EA K +EM GC PN+ TYN + G
Sbjct: 476 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGF 535
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
N L+ +M GF +VST ++L G+ DQ+V
Sbjct: 536 LRNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDDGLDQSV 579
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 204/415 (49%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y + L +H + S A SL++
Sbjct: 3 FFTWLSSPANST--FRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASXVFAA 60
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S LI AY + G ++ AI + ++ + + +L L+++
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKL 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++++
Sbjct: 121 KYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
NT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D+A +M
Sbjct: 180 XNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEML 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N T +++ G C G+ D A + ++ ++ PD+ +Y +I G CK G
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ +M +GLKP ++ + + G+LD A K+M Q + + V Y +I
Sbjct: 300 QAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALI 359
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ D Y+ ++ +C++G+V ++ EM
Sbjct: 360 SGLC-QEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 413
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 191/360 (53%), Gaps = 6/360 (1%)
Query: 108 ISIAASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLG 166
+ A L + SD ++ S LI AY + G ++ AI + ++ + + +L
Sbjct: 38 VVFATILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLE 97
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VK 223
L+++ KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++
Sbjct: 98 HLMKLRYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLR 156
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P++++YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D+A L
Sbjct: 157 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANEL 216
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+M + G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK
Sbjct: 217 FDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCK 276
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G +A L+ EM +GLKP F++ + + G+LD A K+M Q + + V+
Sbjct: 277 NGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVA 336
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y +I GLC +G+ D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 337 YTALISGLC-QEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEM 395
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 161/291 (55%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F + + SYN+L+ +R+ L E F
Sbjct: 125 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD--LDEGFRLK 182
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ N V PDV TY+ +I G CK +++A ++FD M VK PN + + T+I+G CK
Sbjct: 183 SAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKN 242
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + M+++ P+ +TYN +IYGLC NG + +A L+ +M + G K + T+
Sbjct: 243 GRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTY 302
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G D A + + +++ N+ D +Y +I+G C+ G+S +A +L+EM +
Sbjct: 303 TTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLS 362
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GLKP + ++ + + G++ + LLK+M + P+ V+YN ++ G
Sbjct: 363 VGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 113/259 (43%), Gaps = 19/259 (7%)
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGC------------------RPNELTYNAM 267
L +Y TMI+ C L EAK + +++R R + ++ +
Sbjct: 1 LHSYCTMIHFLCTHQMLSEAKSLIQLVVSRKGKGSASVVFATILETKGTQRSDIYVFSGL 60
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I +G + +A R + T + ML+ L + F G+ ++E
Sbjct: 61 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILECGY 120
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ + ++++ FCK G A S+ + GL+P+V S+N + + G+LD
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L M P+ +Y+ +I GLC + +M D +L D M+ G + ++ L+ G+
Sbjct: 181 LKSAMLANGVQPDVYTYSVLINGLC-KESKMDDANELFDEMLVKGLIPNGVTFTTLIDGH 239
Query: 448 CEEGNVENVMQIAHEMVTK 466
C+ G V+ M+I M+++
Sbjct: 240 CKNGRVDLAMEIYKRMLSQ 258
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI ++ G ++ A WF + + + +Y +LL ++ + A + FH++V +
Sbjct: 493 LIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDA 552
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF-------------------DVMTVKPNLLAY 229
P + TY+ +I G CK G I+ A +V+ D T+ PN++ Y
Sbjct: 553 CYPNAI-TYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTY 611
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
++NG CK ++ +A ++ M+ GC PN++ Y+A++ G C G +D A+ + +M
Sbjct: 612 GALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTK 671
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G+ +V T+ S++ + G+ D A+ L +++ + NP+V +Y +++G CK G++++
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEK 731
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A++LL M +G P V ++ A+ L + G++D + L QM C PN+V+Y +I
Sbjct: 732 ALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILIN 791
Query: 410 GLCMA 414
C A
Sbjct: 792 HCCAA 796
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 150/307 (48%), Gaps = 10/307 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++L+ +V I A+E F ++ K +P V TYT++I K G ++ A KV M
Sbjct: 646 YDALVDGFCKVGEIDSAQEVFLRMTKCGYLP-SVHTYTSLIDRMFKDGRLDLAMKVLSQM 704
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN++ Y M++G CK GE E+A ++ M +GC PN +TY A+I GL G+V
Sbjct: 705 LKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKV 764
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D L +M+ G N T++ ++ C G D A L + + + ++ Y
Sbjct: 765 DAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTT 824
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+ GF K + ++ LL+EM + P + + + G L+ A+ L K+M ++
Sbjct: 825 VQGFSK--RFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSS 882
Query: 398 LPNFVS---YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
N S + ++I LC++ ++++ L M R G D + + CL+KG E
Sbjct: 883 SLNMASKDMHTSLIQALCLSS-QVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWN 941
Query: 455 NVMQIAH 461
+Q+ +
Sbjct: 942 EALQLCY 948
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 194/442 (43%), Gaps = 37/442 (8%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN--SNKLSDFFIS- 127
A F NP+ Y YT + D LI A S S S ++
Sbjct: 471 AFLLFQEMKKVGVNPDVYT-----YTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTY 525
Query: 128 -KLIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQ 183
L+ AY + A FH+ + AC +Y++L+ L + I+ A E + +
Sbjct: 526 TALLHAYLKSKQLYQANDIFHR---MVGDACYPNAITYSALIDGLCKAGEIQKACEVYAK 582
Query: 184 IV---------------KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPN 225
++ + + P+V TY ++ G CK + +A + D M +PN
Sbjct: 583 LIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPN 642
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+ Y+ +++GFCK GE++ A++ M G P+ TY ++I + +GR+D A +++
Sbjct: 643 QIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M + NV T+ +M+ GLC G+ ++A+ L + + +P+V +Y +I+G K G
Sbjct: 703 QMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAG 762
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
K D + L +M+ +G P ++ + G LD A LLL +M Q Y
Sbjct: 763 KVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYR 822
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
T + G R L++ M +Y L+ + + G +E +++ EM+
Sbjct: 823 TTVQGF---SKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMME 879
Query: 466 KKGRL-LKLKNFLTRVVDALLL 486
L + K+ T ++ AL L
Sbjct: 880 VSSSLNMASKDMHTSLIQALCL 901
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 160/340 (47%), Gaps = 12/340 (3%)
Query: 111 AASLLKNSN-KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV 169
A LL+ + KL +++I + A+ + H+ + + +Y +LL +
Sbjct: 258 ALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFL 317
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNL 226
+ + + + ++ E P S + +++ YC A K+F+ M P
Sbjct: 318 KKKQLGWCKRIINMMMTEGC-NPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGY 376
Query: 227 LAYNTMINGFCKKGEL------EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
+ YN I C + EL + A+K EM+ C N++ LC G+ ++A
Sbjct: 377 VVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKA 436
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
++ +M GF + ST+ ++ LC + D+A + + + +NPDV +Y ++I+
Sbjct: 437 FQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDS 496
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
FCK G ++A S EMR+ G P V ++ A+ +++ +L +A + +M C PN
Sbjct: 497 FCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPN 556
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
++Y+ +I GLC A G +Q ++ ++I + N++ Y
Sbjct: 557 AITYSALIDGLCKA-GEIQKACEVYAKLIGTSDNIESDFY 595
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 142/299 (47%), Gaps = 15/299 (5%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMI 233
A F H++ + N P+V TY T++ G+ K + K++ ++M + P+ +N+++
Sbjct: 290 AMSFLHRM-RCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLV 348
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR--------VDEAKMLMA 285
+ +C + A K N M GC P + YN I +C GR +D A+ +
Sbjct: 349 HTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSIC--GREELPNPELLDLAEKVYE 406
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M + N + + LC VGKF++A ++ +M PD +Y VI C+
Sbjct: 407 EMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAK 466
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ D+A L +EM+ G+ P V+++ + + G +++A +M C PN V+Y
Sbjct: 467 RVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYT 526
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
++ +K ++ D+ RM+ + YS L+ G C+ G ++ ++ +++
Sbjct: 527 ALLHAYLKSK-QLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLI 584
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 177/457 (38%), Gaps = 51/457 (11%)
Query: 53 LGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAA 112
L ++V V+ +P + FF WA Y HT CY A+ +VL A
Sbjct: 99 LTDSVVVAVLGAVRSPELCVRFFLWAERQV----GYKHTGACYDALAEVLGFEDPARTAE 154
Query: 113 SLLKNSNKLSDFFISKLIKAYGDR----GNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
LL+ + + +L+ R G A+ + K +YN+L+ VL
Sbjct: 155 RLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVL 214
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLA 228
+++A ++ D ST + + CK G +A + + K + +
Sbjct: 215 ASAGQVEMAFRVQKEMSASGFCM-DRSTVGSFAQALCKEGRWGDALDLLEREDFKLDTVL 273
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
MI+G + EA ++ M PN +TY ++ G ++ K ++ M
Sbjct: 274 CTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMM 333
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAV-------------GY-LRNVMEANM------- 327
G + S S++ C + A GY + N+ ++
Sbjct: 334 TEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELP 393
Query: 328 NPDV-----KSYE------VVING---------FCKIGKSDEAISLLKEMRARGLKPTVF 367
NP++ K YE V+N C +GK ++A ++KEM +G P
Sbjct: 394 NPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDAS 453
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++ V L + +D+A LL ++M ++ P+ +Y +I C A G ++ + D
Sbjct: 454 TYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKA-GLIEQAQSWFDE 512
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M +G + + Y+ LL Y + + I H MV
Sbjct: 513 MRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMV 549
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 17/246 (6%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YTA+ D L A +LL K + + LI G G V A + F Q K
Sbjct: 716 YTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMK 775
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK---- 206
+Y L+ + A ++ K+ P + Y T ++G+ K
Sbjct: 776 TKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEM-KQTHWPKYLQGYRTTVQGFSKRFLA 834
Query: 207 -MGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT-- 263
+G++E + D + P Y +I+ F K G LE A + EMM N +
Sbjct: 835 SLGLLEEMES-HDTAPIAP---VYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKD 890
Query: 264 -YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
+ ++I LC++ +V+EA L ++MR G ++S ++KGL K+++A+ +
Sbjct: 891 MHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGI 950
Query: 323 MEANMN 328
+ +N
Sbjct: 951 CQEGVN 956
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 213/419 (50%), Gaps = 22/419 (5%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P+ Y T C+ + + H + +LK ++++ I++L+ D V A
Sbjct: 88 PDLCTYSILTGCFCRLGRI--EHGFAAFGL-ILKTGWRVNEVVINQLLNGLCDAKRVDEA 144
Query: 143 IFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTY 197
+ +++ C+ S N+LL L ++ A E H + ++ P+V TY
Sbjct: 145 MDIL--LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTY 202
Query: 198 TTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T+I G CK ++ A+ V M VK +++ Y+T+I+G CK ++ A+ + M++
Sbjct: 203 NTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMID 262
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G +P+ +TYN +I GLC VD A+ ++ M G K +V T+ +++ GLC D+
Sbjct: 263 KGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDR 322
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A G L+++++ ++ PD+++Y +I+G+ G+ E + L+EM ARGL P V +++ +
Sbjct: 323 ADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLD 382
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L +NG+ A + M + PN Y ++ G A+G + D+ DL+D M+ +G +
Sbjct: 383 YLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYA-ARGAIADLTDLLDLMVANGIS 441
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEM--------VTKKGRLLKLKNFLTRVVDALL 485
+ +++ +L Y ++ ++ M I M V G L+ L RV DA+L
Sbjct: 442 PNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVL 500
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 172/380 (45%), Gaps = 75/380 (19%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ L + ++ AE ++ + V PDV TY T+I G CK ++ A V
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGV-KPDVVTYNTIIDGLCKAQAVDRADGVLQH 329
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M VKP++ YN +I+G+ GE +E + + EM RG P+ +TY+ ++ LC NG+
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKG------------------------------- 305
EA+ + M G K NV+ + +L G
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449
Query: 306 -LCVVGK---FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI---------- 351
LC K D+A+ + + ++PDV +Y ++I+ CK+G+ D+A+
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG 509
Query: 352 -------------------------SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
L EM +G++P V FN + L G++ A
Sbjct: 510 VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQ 569
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+ M ++ PN +SYNT+I G C+A GR + L+D M+ G D Y LL+G
Sbjct: 570 RLIDSMERVGVRPNVISYNTLIGGHCLA-GRTDEAAQLLDVMVSVGLKPDLISYDTLLRG 628
Query: 447 YCEEGNVENVMQIAHEMVTK 466
YC+ G ++N + EM+ K
Sbjct: 629 YCKTGRIDNAYCLFREMLRK 648
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 171/323 (52%), Gaps = 13/323 (4%)
Query: 156 ACLYSYNSLLGVLVRV---NSIKLAEEFFHQIVK--ENVVPPDVSTYTTMIRGYCKMGMI 210
A + ++N LL V+ R ++ +LA F+++ + N V PD+ TY+ + +C++G I
Sbjct: 47 ASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRI 106
Query: 211 ENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKC-MNEMMNRGCRPNELTYNA 266
E+ F ++ + N + N ++NG C ++EA + M GC PN ++ N
Sbjct: 107 EHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNT 166
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKD---NVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
++ GLC RV+EA L+ M +G + NV T+ +++ GLC D+A G L++++
Sbjct: 167 LLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMI 226
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ + DV +Y +I+G CK D A +L+ M +G+KP V ++N + L + +D
Sbjct: 227 DKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVD 286
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
RA +L+ M P+ V+YNTII GLC A+ + + ++ MI D Y+CL
Sbjct: 287 RAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA-VDRADGVLQHMIDKDVKPDIQTYNCL 345
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+ GY G + V++ EM +
Sbjct: 346 IHGYLSTGEWKEVVRRLEEMYAR 368
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 151/285 (52%), Gaps = 4/285 (1%)
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEE 244
N + P+ + ++ Y K MI+ A +F M+ + P+++ Y +I+ CK G +++
Sbjct: 438 NGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDD 497
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A N+M+N G PN + +N+++YGLC R ++A+ L +M G + NV +++
Sbjct: 498 AVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMC 557
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
LC G+ A + ++ + P+V SY +I G C G++DEA LL M + GLKP
Sbjct: 558 NLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKP 617
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ S++ + R + G +D A L ++M + P V+Y+TI+ GL + R + ++L
Sbjct: 618 DLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTR-RFSEAKEL 676
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
MI+SG D Y+ +L G C+ V+ +I + +K R
Sbjct: 677 YLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLR 721
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 173/330 (52%), Gaps = 9/330 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYS--YNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI A G V A+ F+Q I +G S +NSL+ L V+ + AEE F ++
Sbjct: 485 LIDALCKLGRVDDAVLKFNQ--MINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWD 542
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ V P+V + T++ C G + A+++ D M V+PN+++YNT+I G C G +
Sbjct: 543 QGV-RPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTD 601
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + ++ M++ G +P+ ++Y+ ++ G C GR+D A L +M G T+ ++L
Sbjct: 602 EAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTIL 661
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+GL +F +A N++++ D+ +Y +++NG CK DEA + + + ++ L+
Sbjct: 662 QGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLR 721
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + +F + +L + G A+ L +P +PN V+Y ++ + + +G + + ++
Sbjct: 722 PNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNI-IQEGLLDEFDN 780
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
L M +SG D M + +++ G +
Sbjct: 781 LFLAMEKSGCTPDSVMLNAIIRSLLGRGEI 810
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 4/240 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN+L+G A + +V + PD+ +Y T++RGYCK G I+NA +F
Sbjct: 586 SYNTLIGGHCLAGRTDEAAQLLDVMVSVGL-KPDLISYDTLLRGYCKTGRIDNAYCLFRE 644
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P + Y+T++ G EAK+ M+ G + + TYN ++ GLC
Sbjct: 645 MLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNC 704
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA + + + N+ T M+ L G+ A+ ++ + P+V +Y +
Sbjct: 705 VDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCI 764
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ + G DE +L M G P NA+ R L+ GE+ RA L ++ +M+
Sbjct: 765 MMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMN 824
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 8/230 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQA--KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L++ Y G + A F + K + GA YS ++L L A+E + ++K
Sbjct: 625 LLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYS--TILQGLFHTRRFSEAKELYLNMIK 682
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
D+ TY ++ G CK ++ A K+F + ++PN++ + MI+ K G +
Sbjct: 683 SGQ-QWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKK 741
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + + G PN +TY M+ + G +DE L M +G + +++
Sbjct: 742 DAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAII 801
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ L G+ +A YL + E N + + + ++I+ F + + A SL
Sbjct: 802 RSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 221/437 (50%), Gaps = 33/437 (7%)
Query: 52 CLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA 111
+ +V V++ N HAL FF W N + H + I ++L S ++ A
Sbjct: 9 SIDHELVYNVLHSAKNSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHA 64
Query: 112 ASLLKNSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLG 166
+L + K D ++ +I +YG G V+ ++ F + +++ + SY++L
Sbjct: 65 RCILLDMPKKGLEWDEDLWVL-MIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFK 123
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVK 223
V++R +A+ +F++++ E + P T+ M+ G+ G +E A + F+ M +
Sbjct: 124 VILRRGRYMMAKRYFNKMLSEG-IEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIM 182
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ YNTM+NG+C+ ++EEA+K EM R P +TY +I G RVD+A
Sbjct: 183 PDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRF 242
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFC 342
+ +M+ G K N T+ ++L GLC K +A L+ +++ + P D + +I+G C
Sbjct: 243 VEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQC 302
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQM------ 392
K G D A ++LK M ++ +V + + +L+EN GE D+AI LL ++
Sbjct: 303 KAGDLDAAANVLKAM----IRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDII 358
Query: 393 --PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
PQ +YN +I LC G+ E LV ++++ G D T + L++G+ +E
Sbjct: 359 LRPQSTLHMESSAYNPLIEYLC-NNGQTAKAEALVRQLMKLGVQ-DPTALNTLIRGHSQE 416
Query: 451 GNVENVMQIAHEMVTKK 467
G+ ++ ++ M+ +K
Sbjct: 417 GSPDSAFELLKIMLRRK 433
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AY++++ + KK E +AK ++ M+ G P+ + +++ L
Sbjct: 429 MLRRKVDSEQSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVMESL 483
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 182/343 (53%), Gaps = 5/343 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI G ++ A+ F + A + +YNSL+ R K A F Q+V
Sbjct: 118 SSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVG 177
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E ++P DV T+TT+I K G ++ A K+F++M + PN++ YN+++NG C +++
Sbjct: 178 EGILP-DVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMD 236
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + M+ RG + + ++YN +I G C +G+ +EA L KM+ +++T+ +L
Sbjct: 237 HAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILL 296
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
K L G+ A N+ +P + +Y V+++G CK G +EAI + + +++ K
Sbjct: 297 KALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYK 356
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P++ ++ + + + + A+ + ++P + +PN V+YN +I GLC +G++ + E
Sbjct: 357 PSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLC-KEGKLLEAER 415
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L +M SG D ++ +++G+ +E V+ M+ M K
Sbjct: 416 LFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREK 458
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 149/279 (53%), Gaps = 4/279 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+ P+V Y+++I G C++G + A +FD M +K N++ YN++I+ C+ G +EA
Sbjct: 110 ICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEAT 169
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ ++M+ G P+ +T+ +I L G+V EA + M G N+ T+ S+L GL
Sbjct: 170 RTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGL 229
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C+ + D AV ++E + DV SY +ING+C GK++EA++L ++M+ L P++
Sbjct: 230 CLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSI 289
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++ + + L +NG + A L M P+ +Y ++ GLC G +++ D+
Sbjct: 290 TTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLC-KNGCIEEAIDVFR 348
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ + +YS L+ G + E+ M+I E+ T
Sbjct: 349 SLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPT 387
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 164/337 (48%), Gaps = 5/337 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+S L+K G V A+ F + + + Y L+ L + + A E +++
Sbjct: 12 VSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRML 71
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
E + + TY +I CK G+ K+F M + PN++ Y+++ING C+ G+L
Sbjct: 72 SE-ICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKL 130
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA +EM+++G + N +TYN++I+ C G EA ++M G +V T ++
Sbjct: 131 REAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTL 190
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ L GK +A +++ P++ +Y ++NG C + D A+ L + M RG+
Sbjct: 191 IDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGI 250
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
K V S+N + +G+ + A+ L ++M + P+ +Y TI+ GR++ +
Sbjct: 251 KIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTY-TILLKALYQNGRIRTAK 309
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+L + M G + Y+ LL G C+ G +E + +
Sbjct: 310 ELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDV 346
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 135/275 (49%), Gaps = 4/275 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
P++ T +T+++G C G + +A ++FD MT + ++L Y +IN K + A +
Sbjct: 7 PNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVEL 66
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M++ C N TY +I LC +G + + +M G NV + S++ GLC
Sbjct: 67 HRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCR 126
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
VGK +AV ++ + +V +Y +I+ C+ G EA +M G+ P V +
Sbjct: 127 VGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVT 186
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
F + L + G++ A + + M + PN V+YN+++ GLC+ +M L + M
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHH-QMDHAVRLFEVM 245
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G +D Y+ L+ GYC G E M + +M
Sbjct: 246 VERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKM 280
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 121/244 (49%), Gaps = 1/244 (0%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+PNL+ +T++ G C +G++ +A + ++M G + + L Y +I L + A
Sbjct: 6 QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVE 65
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M N T+ ++ LC G + + R ++ + P+V Y +ING C
Sbjct: 66 LHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLC 125
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
++GK EA++L EM ++G+K V ++N++ G A QM LP+ V
Sbjct: 126 RVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVV 185
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++ T+I L KG++Q+ + + MI+ G + Y+ LL G C +++ +++
Sbjct: 186 TFTTLIDHLS-KKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEV 244
Query: 463 MVTK 466
MV +
Sbjct: 245 MVER 248
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 8/226 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH--QIVK 186
LI Y G + A+ F + + E + +Y LL L + I+ A+E F+ QI
Sbjct: 260 LINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICG 319
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
++ P + TYT ++ G CK G IE A VF + KP++ Y+ +I G + E
Sbjct: 320 QS---PSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWE 376
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + +E+ G PN +TYN MI GLC G++ EA+ L +M +G + + + ++
Sbjct: 377 SAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFII 436
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+G + +A+ +L+ + E N +P+ +++N + +S E
Sbjct: 437 RGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSE 482
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 222/461 (48%), Gaps = 20/461 (4%)
Query: 19 ILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWA 78
I V + S +++ + N + + S+ + +++ + V ++I + + AL F+ A
Sbjct: 9 IHVLQVQSEVRQSDSLNKR-RTMGSKAMFKWAKTVTPTHVQQLIQAERDIKKALIIFDSA 67
Query: 79 SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK----LSDFFISKLIKAYG 134
+ N + H ++ + L+S + +A +LL + +++ + + +AYG
Sbjct: 68 TAEYANG--FKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYG 125
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
+I FH+ + SY S+L +LV N +K A F+ + K + PP V
Sbjct: 126 RIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGI-PPTV 184
Query: 195 STYTTMIRGYCK-MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMN 250
++ +I+ +CK G ++ A +F M+ +P+ Y T+ING C+ + EAK+ +
Sbjct: 185 TSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQ 244
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
EM +GC P+ +TY ++I+GLC VDEA L+ M+ + NV T+ S++ G C G
Sbjct: 245 EMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTG 304
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+A L +++ + P++ SY ++NG C GK +EA+ + M+ +G KP +
Sbjct: 305 HSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYG 364
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSY-------NTIICGLCMAKGRMQDVED 423
+ L + A L +M PN +++ N +I GLC + +
Sbjct: 365 KIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQL 424
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ + R G ++ ++ LLK +C + ++ +I EMV
Sbjct: 425 YLSVLTR-GISITVDTFNSLLKCFCNKKDLPKTSRILDEMV 464
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 158/298 (53%), Gaps = 18/298 (6%)
Query: 129 LIKAY-GDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQI 184
LIKA+ + G + A+ F + + N C Y+Y +L+ L R SI A+E ++
Sbjct: 190 LIKAFCKNSGTMDKAMHLF---RTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEM 246
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGE 241
+ P V TYT++I G C++ ++ A ++ + M ++PN+ Y+++++GFCK G
Sbjct: 247 ETKGC-SPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGH 305
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
A+ + M+ + RPN ++Y+ ++ GLC G+++EA + +M+L GFK + +
Sbjct: 306 SSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGK 365
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPD-------VKSYEVVINGFCKIGKSDEAISLL 354
++ LC V +F +A +L ++ + P+ V+++ VI+G C I S+ A L
Sbjct: 366 IVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLY 425
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+ RG+ TV +FN++ + +L + +L +M C+P ++T++ C
Sbjct: 426 LSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFC 483
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC-VVGKFDQAVGYLR- 320
T++ MI L + A+ L+ +M+ ++ + + +L +C G+ + + +R
Sbjct: 81 TFSLMISKLISANQFRLAETLLDRMK----EEKIDVTEDILLSICRAYGRIHKPLDSIRV 136
Query: 321 --NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+ + + P KSY V+ + + A ++MR G+ PTV S N + + +
Sbjct: 137 FHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCK 196
Query: 379 N-GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
N G +D+A+ L + M C P+ +Y T+I GLC + + + ++L+ M G +
Sbjct: 197 NSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRS-IVEAKELLQEMETKGCSPSV 255
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ ++ G C+ NV+ M++ +M K
Sbjct: 256 VTYTSIIHGLCQLNNVDEAMRLLEDMKDK 284
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ + G + A+ F + K Y ++ L V+ + A F ++V
Sbjct: 329 STLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVL 388
Query: 187 ENVVPPDVS------TYTTMIRGYCKMGMIENAKKVFD----VMT--VKPNLLAYNTMIN 234
+ P ++ T+ +I G C I N+ + F V+T + + +N+++
Sbjct: 389 CGIKPNRITWSLHVRTHNRVIHGLCT---INNSNRAFQLYLSVLTRGISITVDTFNSLLK 445
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
FC K +L + + ++EM+ GC P ++ M+ C + +A L+
Sbjct: 446 CFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMKLL 495
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 170/310 (54%), Gaps = 5/310 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ + I+ A++ F ++ K +V + TYT +I G K G+ + ++++ M
Sbjct: 201 YTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEW-TYTVLIHGLFKNGIKKQGFEMYEKM 259
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V PNL YN ++N CK G ++A K +EM RG N +TYN +I GLC +
Sbjct: 260 QEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKA 319
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA +M +M+ +G N+ T+ +++ G C VGK +A+ R++ ++P + +Y ++
Sbjct: 320 NEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++GFCK G + A ++KEM RG+KP+ ++ + +++AI L M ++
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGL 439
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ +Y+ +I G C+ KG+M + L M+ + +Y+ ++ GYC+EG+ +
Sbjct: 440 TPDVHTYSVLIHGFCI-KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRAL 498
Query: 458 QIAHEMVTKK 467
++ EM K+
Sbjct: 499 RLFREMEEKE 508
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 157/302 (51%), Gaps = 8/302 (2%)
Query: 136 RGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
+ +K F ++ Q E+G LY+YN ++ + K A + F ++ +E V +
Sbjct: 245 KNGIKKQGFEMYEKMQ-EDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEM-RERGVSCN 302
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMN 250
+ TY T+I G C+ A KV D M + PNL+ YNT+I+GFC G+L +A
Sbjct: 303 IVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
++ +RG P+ +TYN ++ G C G A ++ +M G K + T+ ++ +
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMD 422
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
++A+ + E + PDV +Y V+I+GFC G+ +EA L K M A+ L+P +N
Sbjct: 423 NMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYN 482
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ + G RA+ L ++M + + PN SY +I LC + + ++ E LV++MI
Sbjct: 483 TMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKER-KSKEAEGLVEKMID 541
Query: 431 SG 432
+G
Sbjct: 542 TG 543
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 179/387 (46%), Gaps = 21/387 (5%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN--SNKL-SDFFISKLIKAYGDRGN 138
+PN + + HT + + +LLS +L S A SLL S K+ S FF S
Sbjct: 29 SPNFHGFQHTHESISILLRLLLSGNLYSHAQSLLLQVISGKIQSQFFTSS---------- 78
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
+ + + +++ E + LY ++ V+ S+ + +F+++V + VP + +
Sbjct: 79 --SLLHYVTESETSETKSRLYEV--MINAYVQSQSLDSSISYFNEMVDKGFVPGS-NCFN 133
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVKPNLLAYN--TMINGFCKKGELEEAKKCMNEMMNRG 256
++ + F+ +K +L Y+ +I G C+ GE+E++ + E+ G
Sbjct: 134 NLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFG 193
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
PN + Y +I G C G +++AK L +M G N T+ ++ GL G Q
Sbjct: 194 FSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGF 253
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ E + P++ +Y V+N CK G++ +A L EMR RG+ + ++N + L
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGL 313
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ + A ++ QM PN ++YNT+I G C G++ L + G +
Sbjct: 314 CREMKANEANKVMDQMKSDGINPNLITYNTLIDGFC-GVGKLGKALSLCRDLKSRGLSPS 372
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ L+ G+C++G+ ++ EM
Sbjct: 373 LVTYNILVSGFCKKGDTSGAGKVVKEM 399
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 127/276 (46%), Gaps = 39/276 (14%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G K A F + ++ + +YN+L+G L R A + Q+ K + + P++ T
Sbjct: 282 GRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM-KSDGINPNLIT 340
Query: 197 YTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y T+I G+C +G + A + + P+L+ YN +++GFCKKG+ A K + EM
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400
Query: 254 NRGCRPNELTY-----------------------------------NAMIYGLCINGRVD 278
RG +P+++TY + +I+G CI G+++
Sbjct: 401 ERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMN 460
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EA L M + N + +M+ G C G +A+ R + E + P+V SY +I
Sbjct: 461 EASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMI 520
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
CK KS EA L+++M G+ P+ N + R
Sbjct: 521 EVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISR 556
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 200/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSH-------SLISI--------------AASLLKNSNK 120
+P + HT Y + L +H SLI I AA L +
Sbjct: 3 SPANXTFRHTLHTYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G V+ AI F ++ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYKEIL-ECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ G+L++ K N M G +P+ TY+ +I GLC +++EA L +M G N
Sbjct: 182 IRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C GK D A+ + ++ PD+ +Y +I G CK G +A LL E
Sbjct: 242 VTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
MR +GLKP ++ + + G+LD A L + M + + V+Y +I GLC +G
Sbjct: 302 MRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G D Y+ ++ +C++ +V+ ++ EM
Sbjct: 361 RATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEM 407
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 148/283 (52%), Gaps = 4/283 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+F + L+ + G + A F + + S+N+L+ +R+ + +
Sbjct: 137 YFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKL-KN 195
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+ + V PDV TY+ +I G CK + A +F+ M K PN + + T+I+G CK G
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+++ A + +M+++ P+ +TYN +IYGLC G + +A+ L+ +MR+ G K + T+
Sbjct: 256 KVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYT 315
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G C G D A +++ ++ D +Y +I+G C+ G++ +A +L+EM +
Sbjct: 316 TLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSV 375
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GLKP ++ + + ++ A LLK+M + +P V+
Sbjct: 376 GLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 169/314 (53%), Gaps = 6/314 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y ++ L + A + F +++ ++P DV Y++++ G C+ G ++ A + F
Sbjct: 1085 VFTYGMIIDALCKDGMTTEALDMFSEMIGAGILP-DVVVYSSLMDGLCRFGRLKEALEFF 1143
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + ++ YN++I+G + G +E +N M++RG P+ T+ +I GLC
Sbjct: 1144 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 1203
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+V EA+ ++ MR G + ++ T+ +++ GLC+VG+ + A ++ + + +V SY
Sbjct: 1204 GKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 1263
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++ING+CK K DEA +EMR +GLKP+ ++N + L ++G + A L +M
Sbjct: 1264 NILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 1323
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+Y ++ GLC G +++ DL + ++ H + ++S LL G C G +E
Sbjct: 1324 CGQFLKLSTYCVLLDGLC-KNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLE 1382
Query: 455 NVMQIAHEMVTKKG 468
+ E ++K G
Sbjct: 1383 EAWKQFDE-ISKNG 1395
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 188/391 (48%), Gaps = 42/391 (10%)
Query: 95 YTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y I D L + + A + + L D + S L+ G +K A+ +F + +
Sbjct: 1088 YGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 1147
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP------------------- 191
A +Y+YNSL+ L R K F + +V P
Sbjct: 1148 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVG 1207
Query: 192 ---------------PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
PD+ TY T++ G C +G +E+A K+F+ + +K N+ +YN +I
Sbjct: 1208 EAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 1267
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
NG+CK +++EA + EM +G +P+ +TYN +I LC +GRV A+ L +M+ G
Sbjct: 1268 NGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQF 1327
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ST+ +L GLC G ++A+ +++ + P+++ + ++++G C+ GK +EA
Sbjct: 1328 LKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQ 1387
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
E+ GL+P ++N + L G L A+ LL QM + CLP+ +++N II L +
Sbjct: 1388 FDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL-L 1446
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
+ + + L++ M + D + S LL
Sbjct: 1447 KENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 39/325 (12%)
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM--TVKPNLLAY 229
N I A + F ++ K+ ++ D TY +I G CK A K+ + M K ++ Y
Sbjct: 1030 NGIPDAVQLFDEMTKKGLLG-DAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTY 1088
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+I+ CK G EA +EM+ G P+ + Y++++ GLC GR+ EA +M
Sbjct: 1089 GMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG 1148
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G +V T+ S++ GL G + + +L +++ +PD ++ ++I+G CK GK E
Sbjct: 1149 RGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGE 1208
Query: 350 AISLLKEMRARGLKPTVFSFNA----------------VFRILVENG------------- 380
A +L+ MR +G +P + ++N +F L + G
Sbjct: 1209 AQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 1268
Query: 381 ------ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
++D A ++M P+ V+YNT+I LC + GR++ + L M G
Sbjct: 1269 GYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQS-GRVRTAQKLFVEMQTCGQF 1327
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQI 459
L + Y LL G C+ G++E M +
Sbjct: 1328 LKLSTYCVLLDGLCKNGHLEEAMDL 1352
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 141/279 (50%), Gaps = 7/279 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLA----YNTMINGFCKKGELEEAKK 247
PD T TT+++G I +A ++FD MT K LL Y +ING CK + A K
Sbjct: 1014 PDAVTVTTLVKGVWMENGIPDAVQLFDEMT-KKGLLGDAKTYGILINGLCKARKTGLAIK 1072
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
++E M C+ + TY +I LC +G EA + ++M G +V + S++ GLC
Sbjct: 1073 -LHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 1131
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G+ +A+ + + + ++ DV +Y +I+G + G E L M RG P F
Sbjct: 1132 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAF 1191
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+F + L + G++ A +L+ M P+ ++YNT++ GLC+ G+++D L +
Sbjct: 1192 TFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLV-GQLEDATKLFES 1250
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ G L+ Y+ L+ GYC++ ++ + EM K
Sbjct: 1251 LADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPK 1289
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 7/278 (2%)
Query: 194 VSTYTTMIRGYCKMGMIE--NAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
+S + +R C+ G+I+ +A K+FD P +N ++ K G
Sbjct: 909 LSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPM 968
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ + G +P+ T N +I+ C V + GF+ + T +++KG+ +
Sbjct: 969 YRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWM 1028
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
AV + + + D K+Y ++ING CK K+ AI L ++M+ K VF+
Sbjct: 1029 ENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFT 1087
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ + L ++G A+ + +M LP+ V Y++++ GLC GR+++ + M
Sbjct: 1088 YGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRF-GRLKEALEFFKEM 1146
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G + D Y+ L+ G G + V + MV +
Sbjct: 1147 EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 1184
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 172/341 (50%), Gaps = 5/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++ A D+G+V A+ + SYN++L L +E ++V+
Sbjct: 235 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR-M 293
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
PP++ T+ T+I C+ G+ E +V M P++ Y T+I+G CK+G LE A
Sbjct: 294 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 353
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +N M + G +PN + YN ++ GLC R +E + L+A+M + T ++
Sbjct: 354 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 413
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G D+ + L ++E PDV +Y VINGFCK G DEA+ LLK M A G KP
Sbjct: 414 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 473
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
S+ V + L A L+ QM Q C N +++NT+I LC KG ++ +L+
Sbjct: 474 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC-KKGLVEQAIELL 532
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+M+ +G + D YS ++ G + G + +++ + MV K
Sbjct: 533 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK 573
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 165/305 (54%), Gaps = 5/305 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N+L+ L R + E Q+V E+ PD+ Y T+I G CK G +E A ++
Sbjct: 299 IVTFNTLISYLCRNGLFERVHEVLAQMV-EHGCTPDIRMYATIIDGICKEGHLEVAHEIL 357
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +KPN++ YNT++ G C EE ++ + EM ++ C +++T+N ++ C N
Sbjct: 358 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 417
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G VD L+ +M +G +V T+ +++ G C G D+AV L+++ P+ SY
Sbjct: 418 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 477
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+V+ G C + +A L+ +M +G +FN + L + G +++AI LLKQM
Sbjct: 478 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 537
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ +SY+T+I GL A G+ + +L++ M+ G + + +YS + EG +
Sbjct: 538 NGCSPDLISYSTVIDGLGKA-GKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRIN 596
Query: 455 NVMQI 459
V+Q+
Sbjct: 597 KVIQM 601
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 169/321 (52%), Gaps = 8/321 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+LL L + EE ++ ++ P D T+ ++ +C+ G+++ ++ + M
Sbjct: 372 YNTLLKGLCSAERWEETEELLAEMFDKDC-PLDDVTFNILVDFFCQNGLVDRVIELLEQM 430
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
P+++ Y T+INGFCK+G ++EA + M GC+PN ++Y ++ GLC R
Sbjct: 431 LEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERW 490
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A+ LM++M G N T +++ LC G +QA+ L+ ++ +PD+ SY V
Sbjct: 491 VDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 550
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K GK+DEA+ LL M +G+ P ++++ L G +++ I + +
Sbjct: 551 IDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTI 610
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ V YN +I LC +G + + + M+ SG + + Y+ L++G EG V+
Sbjct: 611 RSDAVLYNAVISSLC-KRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 669
Query: 458 QIAHEMVTKKGRLLK--LKNF 476
++ E+ + KG L K +K+F
Sbjct: 670 EMLTELCS-KGALRKHLMKHF 689
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 128/270 (47%), Gaps = 1/270 (0%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
Y M+ GYC+ G +E+A+++ + V PN Y ++ C +G + +A ++EM RG
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 189
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C P Y+ ++ C G A ++ + G +V +L +C G D+A+
Sbjct: 190 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 249
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
LR++ PDV SY V+ G C + L++EM P + +FN + L
Sbjct: 250 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 309
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
NG +R +L QM + C P+ Y TII G+C +G ++ ++++RM G +
Sbjct: 310 CRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGIC-KEGHLEVAHEILNRMPSYGLKPN 368
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ LLKG C E ++ EM K
Sbjct: 369 VVCYNTLLKGLCSAERWEETEELLAEMFDK 398
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 138/269 (51%), Gaps = 8/269 (2%)
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+++IR C G A + ++AYN M+ G+C+ G+LE A++ +
Sbjct: 99 SSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAV---PV 155
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
PN TY ++ LC GR+ +A ++ +M G + +L+ C G F AV
Sbjct: 156 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVR 215
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L ++ DV + +V+N C G DEA+ LL+++ + G +P V S+NAV + L
Sbjct: 216 VLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLC 275
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
L+++M +M C PN V++NT+I LC G + V +++ +M+ G D
Sbjct: 276 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCR-NGLFERVHEVLAQMVEHGCTPDI 334
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MY+ ++ G C+EG++E +AHE++ +
Sbjct: 335 RMYATIIDGICKEGHLE----VAHEILNR 359
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 170/411 (41%), Gaps = 111/411 (27%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ R ++ A + VPP+ TY ++R C G I +A V D M
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP----VPPNAYTYFPVVRALCARGRIADALAVLDEM 185
Query: 221 T-----------------------------VKPNLLAY---------NTMINGFCKKGEL 242
V +L A N ++N C +G +
Sbjct: 186 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 245
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+EA + ++ + GC P+ ++YNA++ GLC+ R + LM +M N+ T ++
Sbjct: 246 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 305
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ LC G F++ L ++E PD++ Y +I+G CK G + A +L M + GL
Sbjct: 306 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 365
Query: 363 KPTVFSFNAV-------------------------------FRILV----ENGELDRAIL 387
KP V +N + F ILV +NG +DR I
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 425
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLC-----------------------------MAKG-- 416
LL+QM + C+P+ ++Y T+I G C + KG
Sbjct: 426 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 485
Query: 417 ---RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
R D EDL+ +MI+ G L+ ++ L+ C++G VE +++ +M+
Sbjct: 486 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 536
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 174/347 (50%), Gaps = 40/347 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L S++SL+GVL R + A F ++ + +VP +V YT +I G+C+ G + +A K+
Sbjct: 397 LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV-IYTILIDGFCRNGALSDALKMR 455
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M + +++ YNT +NG CKK +A NEM+ RG P+ T+ +I G C +
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKD 515
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D+A L M K + T+ +++ G C G+ +A +++ ++ PD SY
Sbjct: 516 GNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISY 575
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTV---------------------------- 366
V+NGFC G EA++L +M +G++P +
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635
Query: 367 -------FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
FS+N + ++ L++A +L+ +M + N ++YN I+ G C A+G+MQ
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFC-AEGKMQ 694
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E ++ +MI G N D YS L+ G+ + N++ + EM+ +
Sbjct: 695 EAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 163/312 (52%), Gaps = 6/312 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+LL + R ++I A+E F ++ + V+P D+ +++++I + G + A F
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLP-DLVSFSSLIGVLARNGHLYQALMHFRE 422
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+ + Y +I+GFC+ G L +A K +EM+ RGC + +TYN + GLC
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+A ML +M G + T ++++G C G D+A+ ++ N+ PD +Y
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+GFCK G+ A L +M + + P S+ V +G L A+ L QM +
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V+ NT+I G C + G M + + +MI +G D Y+ L+ GY +E N+E
Sbjct: 603 IRPNLVTCNTLIKGYCRS-GDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 457 MQIAHEMVTKKG 468
+ +EM K+G
Sbjct: 662 FILINEM-EKRG 672
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 157/276 (56%), Gaps = 5/276 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+ L L + A+ F+++V+ +VP D T+TT+IRGYCK G ++ A +F+
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVP-DFYTFTTLIRGYCKDGNMDKALNLFEA 527
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KP+ + YNT+I+GFCK GE+ AK+ ++M+ + P+ ++Y ++ G C +G
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L +M G + N+ T +++KG C G +A YL ++ + PD SY
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+ K ++A L+ EM RGL+ + ++N + G++ A +L++M ++
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
P+ +Y+++I G +++ M++ D M++ G
Sbjct: 708 INPDGATYSSLING-HVSQDNMKEAFRFHDEMLQRG 742
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 183/419 (43%), Gaps = 77/419 (18%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
D + ++A R +A + + AC N LLG LVR + LA E +
Sbjct: 191 DLLVRTYVQAKKLREGSEAFQILRRKGVSVSINAC----NKLLGGLVRTGWVDLAWEIYG 246
Query: 183 QIVK-----------------------ENV-----------VPPDVSTYTTMIRGYCKMG 208
++V+ ENV V D+ TY T+I YC+ G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 209 MIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
++E A ++ F ++P LL YN ++ G CK G+ + AK + EM+ G PN TYN
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
++ +C + EA+ + +M G ++ + S++ L G QA+ + R + +
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA-------------------------- 359
+ PD Y ++I+GFC+ G +A+ + EM A
Sbjct: 427 GIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADA 486
Query: 360 ---------RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
RG+ P ++F + R ++G +D+A+ L + M + + P+ V+YNT+I G
Sbjct: 487 DMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
C A G M ++L D MIR D Y +L G+C G + + + +M+ K R
Sbjct: 547 FCKA-GEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 154/309 (49%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y+ L+ V+ ++ E F QI++ V ++ ++ G + G ++ A +++ +
Sbjct: 190 YDLLVRTYVQAKKLREGSEAF-QILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
++ N+ N M+N CK + E +++M +G + +TYN +I C G V
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA L+ G + + T+ ++L GLC +GK+D+A L +++ + P+ +Y +
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+ C+ EA + EM RG+ P + SF+++ +L NG L +A++ ++M +
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ V Y +I G C G + D + D M+ G +D Y+ L G C++ +
Sbjct: 429 VPDNVIYTILIDGFC-RNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487
Query: 458 QIAHEMVTK 466
+ +EMV +
Sbjct: 488 MLFNEMVER 496
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 132/246 (53%), Gaps = 5/246 (2%)
Query: 123 DFF-ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
DF+ + LI+ Y GN+ A+ F + +YN+L+ + + A+E +
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCK 238
+++++++P +S Y T++ G+C G++ A + D M ++PNL+ NT+I G+C+
Sbjct: 561 DDMIRKDIIPDHIS-YGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR 619
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G++ +A + +++M++ G P+ +YN +I G +++A +L+ +M G + N+ T
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +L G C GK +A LR ++E +NPD +Y +ING EA EM
Sbjct: 680 YNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEML 739
Query: 359 ARGLKP 364
RGL P
Sbjct: 740 QRGLVP 745
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 131/246 (53%), Gaps = 4/246 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
Y++ +L+ + ++ A F +V+ N+ PD TY T+I G+CK G + AK+++
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL-KPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M K P+ ++Y T++NGFC G L EA ++M+ +G RPN +T N +I G C +
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + +A ++KM NG + ++ +++ G ++A + + + + ++ +Y
Sbjct: 621 GDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITY 680
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++NGFC GK EA +L++M G+ P +++++ V + A +M Q
Sbjct: 681 NLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ 740
Query: 395 MDCLPN 400
+P+
Sbjct: 741 RGLVPD 746
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LIK Y G++ A + + +K I NG +SYN+L+ ++ +++ A +++ K
Sbjct: 613 LIKGYCRSGDMPKA--YEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ ++ TY ++ G+C G ++ A++V M + P+ Y+++ING + ++
Sbjct: 671 RGL-QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMK 729
Query: 244 EAKKCMNEMMNRGCRPNE 261
EA + +EM+ RG P++
Sbjct: 730 EAFRFHDEMLQRGLVPDD 747
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 172/333 (51%), Gaps = 8/333 (2%)
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
+R ++ +++ + KQI +YS+N L+ + + A F +I K + PDV
Sbjct: 93 ERPDLVISLYQKMERKQIRCD--IYSFNILIKCFCSCSKLPFALSTFGKITKLGL-HPDV 149
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
T+TT++ G C + A F M T +PN++ + T++NG C++G + EA ++
Sbjct: 150 VTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDR 209
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVG 310
MM G +P ++TY ++ G+C G A L+ KM ++ NV + +++ LC G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ A + E + PD+ +Y +I GFC G+ +A LL+EM R + P V ++N
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
A+ V+ G+ A L +M +PN ++YN++I G C + R+ ED+ M
Sbjct: 330 ALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC-KQDRLDAAEDMFYLMAT 388
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + D ++ L+ GYC +++ M++ HEM
Sbjct: 389 KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 421
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 177/341 (51%), Gaps = 6/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIK + + A+ F + ++ + ++ +LL L + + A +FFHQ+ E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF-ET 178
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P+V T+TT++ G C+ G I A + D M ++P + Y T+++G CKKG+ A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 246 KKCMNEMMN-RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ +M PN + Y+A+I LC +GR +A+ L +M+ G ++ T+ SM+
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C G++ A L+ ++E ++PDV +Y +IN F K GK EA L EM RG+ P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 358
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++N++ + LD A + M C P+ ++ T+I G C AK R+ D +L
Sbjct: 359 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK-RIDDGMEL 417
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ M R G + Y+ L+ G+C G++ + ++ +M++
Sbjct: 418 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS 458
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 191/389 (49%), Gaps = 20/389 (5%)
Query: 95 YTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y+AI D L S A +L ++ D F + +I + G A +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + + +YN+L+ V+ A E + +++ ++P + TY +MI G+CK +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI-TYNSMIDGFCKQDRL 376
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ +F +M K P++ + T+I+G+C +++ + ++EM RG N +TYN +
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I+G C+ G ++ A L +M +G ++ T ++L GLC GK A+ + + ++ M
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496
Query: 328 N-----------PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ PDV +Y ++I G GK EA L +EM RG+ P +++++ L
Sbjct: 497 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ LD A + M PN V++NT+I G C A GR+ D +L M R G D
Sbjct: 557 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA-GRVDDGLELFCEMGRRGIVAD 615
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+Y L+ G+ + GN+ + I EM++
Sbjct: 616 AIIYITLIYGFRKVGNINGALDIFQEMIS 644
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 167/333 (50%), Gaps = 6/333 (1%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V A+ +FHQ + + ++ +L+ L R I A +++++ + P + TY
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI-TYG 223
Query: 199 TMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T++ G CK G +A +K+ +V + PN++ Y+ +I+ CK G +A+ EM
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G P+ TYN+MI G C +GR +A+ L+ +M +V T+ +++ GKF +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A ++ + P+ +Y +I+GFCK + D A + M +G P VF+F +
Sbjct: 344 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+D + LL +MP+ + N V+YNT+I G C+ G + DL +MI SG
Sbjct: 404 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV-GDLNAALDLSQQMISSGVC 462
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D + LL G C+ G +++ +++ M K
Sbjct: 463 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 168/320 (52%), Gaps = 16/320 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++++ L + A+ F ++ +E + PD+ TY +MI G+C G +A+++ M
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEM-QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ YN +IN F K+G+ EA + +EM+ RG PN +TYN+MI G C R+
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 376
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A+ + M G +V T +++ G C + D + L + + + +Y +
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM--PQM 395
I+GFC +G + A+ L ++M + G+ P + + N + L +NG+L A+ + K M +M
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496
Query: 396 D---------CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
D P+ ++YN +ICGL + +G+ + E+L + M G D YS ++ G
Sbjct: 497 DLDASHPFNGVEPDVLTYNILICGL-INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 447 YCEEGNVENVMQIAHEMVTK 466
C++ ++ Q+ M +K
Sbjct: 556 LCKQSRLDEATQMFVSMGSK 575
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 15/283 (5%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI Y + + H+ + A +YN+L+ V + A + Q
Sbjct: 396 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 455
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------VKPNLLAY 229
++ V P D+ T T++ G C G +++A ++F M V+P++L Y
Sbjct: 456 MISSGVCP-DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 514
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +I G +G+ EA++ EM +RG P+ +TY++MI GLC R+DEA + M
Sbjct: 515 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 574
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
F NV T +++ G C G+ D + + + D Y +I GF K+G +
Sbjct: 575 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 634
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
A+ + +EM + G+ P + + EL+RA+ +L+ +
Sbjct: 635 ALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 125/246 (50%), Gaps = 2/246 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ ++ ++N +I FC +L A ++ G P+ +T+ +++GLC+ RV EA
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+M + NV T +++ GLC G+ +AV L +ME + P +Y +++G
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 342 CKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CK G + A++LL++M + P V ++A+ L ++G A L +M + P+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+YN++I G C + GR D E L+ M+ + D Y+ L+ + +EG ++
Sbjct: 290 LFTYNSMIVGFC-SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELY 348
Query: 461 HEMVTK 466
EM+ +
Sbjct: 349 DEMLPR 354
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 2/219 (0%)
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M + R + ++N +I C ++ A K+ G +V T ++L GLCV
Sbjct: 103 QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVE 162
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ +A+ + + E P+V ++ ++NG C+ G+ EA++LL M GL+PT ++
Sbjct: 163 DRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222
Query: 370 NAVFRILVENGELDRAILLLKQMPQMD-CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ + + G+ A+ LL++M ++ +PN V Y+ II LC GR D ++L M
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC-KDGRHSDAQNLFTEM 281
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G D Y+ ++ G+C G + Q+ EM+ +K
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 121/245 (49%), Gaps = 17/245 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI + G++ AA+ Q I +G C + + N+LL L +K A E F + K
Sbjct: 436 LIHGFCLVGDLNAALDLSQQ--MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 493
Query: 187 E----------NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
N V PDV TY +I G G A+++++ M + P+ + Y++MI
Sbjct: 494 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G CK+ L+EA + M ++ PN +T+N +I G C GRVD+ L +M G
Sbjct: 554 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ + +++ G VG + A+ + ++ + + PD + ++ GF + + A+++
Sbjct: 614 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 673
Query: 354 LKEMR 358
L++++
Sbjct: 674 LEDLQ 678
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+S++ L + + + A + F + ++ P+V T+ T+I GYCK G +++ ++F
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFVSMGSKSF-SPNVVTFNTLINGYCKAGRVDDGLELFCE 606
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + + + Y T+I GF K G + A EM++ G P+ +T M+ G
Sbjct: 607 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 666
Query: 277 VDEAKMLMAKMRLN 290
++ A ++ ++++
Sbjct: 667 LERAVAMLEDLQMS 680
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 181/353 (51%), Gaps = 5/353 (1%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+L++ + F + +I + ++AA ++ K + +YN ++G L
Sbjct: 138 ILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 197
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYN 230
+ LA Q++ +N +P V TYT +I G I A K+ + M + P++ YN
Sbjct: 198 LGLALTVLDQLLLDNCMP-TVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 256
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+I G CK+G +E A + + + ++GC P+ ++YN ++ G+ DE + L+A+M
Sbjct: 257 AIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 316
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G + N T+ ++ LC G+ D+A+ L+ ++E + PD SY+ +I+ CK G+ D A
Sbjct: 317 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 376
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
I ++ M + G P + ++N + L +NG ++A+ + ++ M C PN SYNT+I
Sbjct: 377 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 436
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L R + + +V MI G + D Y+ L+ C +G VE + + +M
Sbjct: 437 LWSCGDRSRAL-GMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDM 488
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 168/313 (53%), Gaps = 5/313 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y L+ + I A + +++ ++P D+ TY +IRG CK GM+E A ++
Sbjct: 219 TYTILIEATIVEGGINEAMKLLEEMLARGLLP-DMYTYNAIIRGMCKEGMVERAAELITS 277
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+T K P++++YN ++ F +G+ +E +K + EM +RGC PN++TY+ +I LC GR
Sbjct: 278 LTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGR 337
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEA ++ M + ++ ++ LC G+ D A+G + ++ PD+ +Y
Sbjct: 338 IDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNT 397
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ CK G +++A+ + ++R G P V S+N + L G+ RA+ ++ M
Sbjct: 398 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 457
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ ++YN++I LC G +++ L+D M +SG Y+ +L G C+ +++
Sbjct: 458 IDPDEITYNSLISCLC-RDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 516
Query: 457 MQIAHEMVTKKGR 469
+ + EM+ K R
Sbjct: 517 IGMFAEMIEKGCR 529
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 157/321 (48%), Gaps = 38/321 (11%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--VKPNLLAYNTMINGFC 237
+F + + PDV T +I+G+ IE A +V +++ +P++ AYN +I+GFC
Sbjct: 99 YFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFC 158
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC------------------------- 272
K ++E A + +N M RG P+ +TYN MI LC
Sbjct: 159 KVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVI 218
Query: 273 ----------INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
+ G ++EA L+ +M G ++ T+ ++++G+C G ++A + ++
Sbjct: 219 TYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL 278
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
PDV SY +++ F GK DE L+ EM +RG +P +++ + L G +
Sbjct: 279 TSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRI 338
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
D AI +LK M + + P+ SY+ +I LC +GR+ ++D MI +G D Y+
Sbjct: 339 DEAISVLKVMIEKELTPDTYSYDPLISALC-KEGRLDLAIGIMDYMISNGCLPDIVNYNT 397
Query: 443 LLKGYCEEGNVENVMQIAHEM 463
+L C+ GN ++I +++
Sbjct: 398 ILAALCKNGNANQALEIFNKL 418
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 138/266 (51%), Gaps = 4/266 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL + E+ ++ P V TY+ +I C+ G I+ A V V
Sbjct: 289 SYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV-TYSILISSLCRFGRIDEAISVLKV 347
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+ +Y+ +I+ CK+G L+ A M+ M++ GC P+ + YN ++ LC NG
Sbjct: 348 MIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGN 407
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++A + K+R G NVS++ +M+ L G +A+G + ++ ++PD +Y
Sbjct: 408 ANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNS 467
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ C+ G +EAI LL +M G +PTV S+N V L + +D AI + +M +
Sbjct: 468 LISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 527
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVE 422
C PN +Y +I G+ A R + +E
Sbjct: 528 CRPNETTYILLIEGIGFAGWRTEAME 553
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 4/237 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + G + AI + E YSY+ L+ L + + LA ++
Sbjct: 326 SILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMIS 385
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELE 243
+P D+ Y T++ CK G A ++F+ M PN+ +YNTMI+ G+
Sbjct: 386 NGCLP-DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + M+++G P+E+TYN++I LC +G V+EA L+ M +GF+ V ++ +L
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 504
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
GLC V + D A+G ++E P+ +Y ++I G G EA+ L + +R
Sbjct: 505 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 561
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 35/270 (12%)
Query: 232 MINGFCKKGELEEAKKCMNEMMNRG----------------------------------C 257
++N CK G+ E+ + ++N+G
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ YNA+I G C +++ A ++ +M+ GF ++ T+ M+ LC K A+
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALT 203
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L ++ N P V +Y ++I G +EA+ LL+EM ARGL P ++++NA+ R +
Sbjct: 204 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 263
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G ++RA L+ + C P+ +SYN ++ + +G+ + E LV M G +
Sbjct: 264 KEGMVERAAELITSLTSKGCEPDVISYNILLRAF-LNQGKWDEGEKLVAEMFSRGCEPNK 322
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
YS L+ C G ++ + + M+ K+
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKE 352
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 184/364 (50%), Gaps = 5/364 (1%)
Query: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL 164
+S S+ + K + ++ + LI + G V I F + ++ + + +Y +
Sbjct: 21 NSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVI 80
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK- 223
+ L A F ++ +E P++ TYT MI CK +E +++ D M K
Sbjct: 81 VHALFESGRRMEAINLFSEM-RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139
Query: 224 --PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
P++ YN +I+G+CK+G +E A++ ++ M + C PNE TYN +I G C V A
Sbjct: 140 LVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAM 199
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L++KM + +V T+ S++ G C +G D A L + E + PD +Y V I+
Sbjct: 200 ALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTL 259
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK G+ +EA L ++ +G+K + A+ + G++D A LL +M DCLPN
Sbjct: 260 CKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNS 319
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
+YN +I GLC + ++Q+ L++ MI+ G Y+ L+ +EG+ + +I
Sbjct: 320 STYNALIDGLCKER-KVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILD 378
Query: 462 EMVT 465
+MV+
Sbjct: 379 QMVS 382
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 168/357 (47%), Gaps = 40/357 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++ A + G AI F + ++ +++Y ++ + + ++ ++V++
Sbjct: 80 IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---------------------------- 220
+VP V TY +I GYCK GM+E A+++ D+M
Sbjct: 140 LVPS-VPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRA 198
Query: 221 ----------TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+ P+++ YN++I+G CK G L+ A + +N M G P++ TY+ I
Sbjct: 199 MALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDT 258
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC GR++EA +L ++ G K N + +++ G C GK D A L ++ + P+
Sbjct: 259 LCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPN 318
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+Y +I+G CK K EA+ L++ M +GLK TV ++ + +++ G+ D A +L
Sbjct: 319 SSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILD 378
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
QM P+ Y I C +G +++ ED++ M G D Y+ ++ Y
Sbjct: 379 QMVSSGYQPDVYIYTAFIHAFC-TRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAY 434
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 156/325 (48%), Gaps = 8/325 (2%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWF 146
+ P Y A+ D ++ A +L NS ++ ++LI + + NV A+
Sbjct: 143 SVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALL 202
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ + + +YNSL+ ++ + A + ++ EN V PD TY+ I CK
Sbjct: 203 SKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLN-LMNENGVVPDQWTYSVFIDTLCK 261
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G IE A +F+ + +K N + Y +I+G+CK G++++A ++ M+ C PN T
Sbjct: 262 KGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSST 321
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YNA+I GLC +V EA +LM M G K V T+ ++ + G FD A L ++
Sbjct: 322 YNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMV 381
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ PDV Y I+ FC G EA ++ M RG+ P ++ V G L+
Sbjct: 382 SSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLN 441
Query: 384 RAILLLKQMPQMDCLPNFVSYNTII 408
A +LK+M C P+ +Y+ +I
Sbjct: 442 PAFDVLKRMFDTGCDPSHHTYSCLI 466
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 122/241 (50%), Gaps = 10/241 (4%)
Query: 232 MINGFCKKGELEEAK---------KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
M+NG+CK G L EA N M +GCR NE++Y +I+GLC GRVDE
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
+ KMR + V T+ ++ L G+ +A+ + E P++ +Y V+IN C
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K K +E +L EM +GL P+V ++NA+ + G ++ A +L M C PN
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YN +ICG C K + L+ +M+ S Y+ L+ G C+ G +++ ++ +
Sbjct: 181 TYNELICGFCRKK-NVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239
Query: 463 M 463
M
Sbjct: 240 M 240
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 155/338 (45%), Gaps = 34/338 (10%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y+ + L + I+ A F+ + KE + + YT +I GYCK G +++A + D
Sbjct: 250 WTYSVFIDTLCKKGRIEEANVLFNSL-KEKGIKANEVIYTALIDGYCKAGKMDDANSLLD 308
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + PN YN +I+G CK+ +++EA M M+ +G + TY +I + G
Sbjct: 309 RMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEG 368
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
D A ++ +M +G++ +V + + + C G +A + + E + PD +Y
Sbjct: 369 DFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYT 428
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG--------------- 380
+VI+ + +G + A +LK M G P+ +++ + + L++
Sbjct: 429 LVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIP 488
Query: 381 --------------ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+ + A+ L ++M + C PN +Y +I GLC GR+ + L D
Sbjct: 489 NVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKV-GRLGVAQKLFD 547
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M G + +Y+ LL CE G + +++ M+
Sbjct: 548 HMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMM 585
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 146/314 (46%), Gaps = 48/314 (15%)
Query: 200 MIRGYCKMGM---------IENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELE---- 243
M+ GYCK+G + +A VF++M K N ++Y +I+G C+ G ++
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 244 -------------------------------EAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
EA +EM RGC PN TY MI +C
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+++E + ++ +M G +V T+ +++ G C G + A L + + NP+ +
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y +I GFC+ A++LL +M L P+V ++N++ + G LD A LL M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ +P+ +Y+ I LC KGR+++ L + + G + +Y+ L+ GYC+ G
Sbjct: 241 NENGVVPDQWTYSVFIDTLC-KKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299
Query: 453 VENVMQIAHEMVTK 466
+++ + M+T+
Sbjct: 300 MDDANSLLDRMLTE 313
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 118/287 (41%), Gaps = 35/287 (12%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA---- 213
+Y Y + + +IK AE+ + + V+P D TYT +I Y +G++ A
Sbjct: 389 VYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMP-DALTYTLVIDAYGGLGLLNPAFDVL 447
Query: 214 KKVFDVMTVKPNLLAYNTMINGFCKKG-----------------------------ELEE 244
K++FD P+ Y+ +I K+ + E
Sbjct: 448 KRMFDT-GCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFET 506
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + +M+ GC PN TY +I GLC GR+ A+ L M G + + + S+L
Sbjct: 507 ALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLN 566
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
C +G + AV + +ME P ++S V+ G + G ++A + + G
Sbjct: 567 CCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYND 626
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
++ + L++NG D LL M C + +Y +I GL
Sbjct: 627 DEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 14/253 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I AYG G + A F K++ + C S+++ ++ + +L +++ + + ++
Sbjct: 430 VIDAYGGLGLLNPA---FDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDS 486
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+ P+V + + KM E A ++F+ M PN+ Y +I G CK G L A
Sbjct: 487 I--PNV--FFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVA 542
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+K + M RG P+E YN+++ C G +A L+ M +G + + + G
Sbjct: 543 QKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCG 602
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L G ++A N+++ N D +++++I+G K G SD LL M ARG +
Sbjct: 603 LYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQ-- 660
Query: 366 VFSFNAVFRILVE 378
+R+L+E
Sbjct: 661 --IHPQTYRMLIE 671
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 224/470 (47%), Gaps = 42/470 (8%)
Query: 4 PRRSLTNISQI----PDQSILVTSITSVIQRLNPQ-NPSPKNISSQPLDQFSLCLGSNIV 58
P S+ ++ QI + L + S++ R N Q +PS L + L + V
Sbjct: 20 PYSSIASLPQILSLDSEPVDLSAQLLSILSRPNWQKHPS--------LRKLLPSLTPSHV 71
Query: 59 TKVIYEQTNPYHALFFFNW-ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAA----S 113
+ + +P AL FFNW A P + H Y+++ ++L+ L+ +A S
Sbjct: 72 SSLFAFNLDPQTALSFFNWIALRPG-----FKHNVHSYSSMLNILIRARLLGVAEKIRIS 126
Query: 114 LLKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
++K+ + D F+ ++ + G K L YN++L L +
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFK-------------PTLRCYNTILMSLSKFL 173
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAY 229
I + + +++ N + P++ T+ M+ GYCK+G + A+ + + P+ Y
Sbjct: 174 LIDEMKTVYLELLN-NQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTY 232
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
++I G C+ ++ A + M +GC+ NE++Y +I+GLC GR++EA L A M
Sbjct: 233 TSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTE 292
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+ V T+ ++ L G+ +A+ + E P+V +Y V+I+G CK K DE
Sbjct: 293 DNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDE 352
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A +L EM +GL P+V ++NA+ + G +D A +L M C PN +YN +IC
Sbjct: 353 ARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC 412
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
GLC K ++ L+++M+ + Y+ L+ G C+ ++E+ ++
Sbjct: 413 GLC-KKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 181/344 (52%), Gaps = 9/344 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ LI + G + A+ F A E+ C + +Y L+ L A F+++
Sbjct: 268 TNLIHGLCEAGRINEALKLF--ADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
KE P+V TYT +I G CK ++ A+K+ M+ K P+++ YN +I+G+CK+G
Sbjct: 326 -KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+++A + ++ M + C PN TYN +I GLC +V +A L+ KM ++ T+ S
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C V + A L + E + PD +Y V I+ CK G+ +EA +L ++A+G
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+K + A+ + G++D A LL++M CLPN +YN +I GLC K +M++
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK-KMKEA 563
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
LV +M+ G Y+ L+ ++G ++ +++ + MV+
Sbjct: 564 SSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 173/361 (47%), Gaps = 40/361 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A G A+ F++ K+ +++Y L+ L + N + A + ++ ++
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------------------- 221
++P V TY +I GYCK GMI++A ++ D+M
Sbjct: 365 LIP-SVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423
Query: 222 -----------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+ P+L+ YN++I+G CK +LE A + ++ M G P++ TY+ I
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC GRV+EA L ++ G K N + +++ G C VGK D A L ++ P+
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPN 543
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+Y V+I G CK K EA SL+ +M G+KPTV ++ + ++++G D A+ +
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
M + P+ +Y + ++G +++V+D++ +M G D Y+ L+ GY
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAY-FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARL 662
Query: 451 G 451
G
Sbjct: 663 G 663
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 32/337 (9%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YNSL+ +VN ++ A ++ EN + PD TY+ I CK G +E A +F
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLL-SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF 497
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D + VK N + Y +I+G+CK G+++ A + M+N C PN TYN +I GLC
Sbjct: 498 DSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKE 557
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
++ EA L+AKM G K V T+ ++ + G FD A+ +++ PDV +Y
Sbjct: 558 KKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++ + G +E ++ +M G+ P + ++ + G RA LK M
Sbjct: 618 TAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVD 677
Query: 395 MDCLPNFVSYNTIICGLC----MAKGRMQ------------DVED------------LVD 426
C P+ + +I L M + R + D+ D L +
Sbjct: 678 TGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFE 737
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+M+ G +D ++Y L+ G+C++ +E + H M
Sbjct: 738 KMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 774
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 127/309 (41%), Gaps = 46/309 (14%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++SY+S+L +L+R + +AE+ ++K DV + R KM NA F
Sbjct: 101 VHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFR---KM----NADGEF 153
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
KP L YNT++ K ++E K E++N P
Sbjct: 154 ---KFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISP------------------ 192
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
N+ T +M+ G C +G +A Y +++A ++PD +Y +
Sbjct: 193 -----------------NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSL 235
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I G C+ D A + M +G + S+ + L E G ++ A+ L M + +C
Sbjct: 236 ILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNC 295
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P +Y +I L GR + +L + M G + Y+ L+ G C+E ++
Sbjct: 296 CPTVRTYTVLIYALS-GSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEAR 354
Query: 458 QIAHEMVTK 466
++ EM K
Sbjct: 355 KMLSEMSEK 363
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 114/275 (41%), Gaps = 43/275 (15%)
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
E + PD+ TYT +I GY ++G+ A M KP+L + +I + ++
Sbjct: 642 EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK 701
Query: 244 EAK-----------------------------KCMNEMMNRGCRPNELTYNAMIYGLCIN 274
E + K +M+ GC + Y A+I G C
Sbjct: 702 ETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQ 761
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R++EA+ L+ M+ G + + S+L C +G + +AV + ++E + P ++SY
Sbjct: 762 ERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESY 821
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++ G G +++A ++ + + G ++ + L++ +D L+ M +
Sbjct: 822 KLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEE 881
Query: 395 MDCLPNFVSYNTIICGLCM-------AKGRMQDVE 422
D + I C M KG ++D E
Sbjct: 882 KDA----TAQADIACAALMRLAAANSTKGALEDHE 912
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 29/232 (12%)
Query: 150 KQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
K +E+G + Y +L+ + ++ A+ H + KE + P Y +++ CK+
Sbjct: 738 KMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM-KERGMSPSEDIYNSLLDCCCKL 796
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G+ A ++ D M + P L +Y ++ G +G E+AK + +++ G +E+ +
Sbjct: 797 GVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAW 856
Query: 265 NAMIYGLCINGRVDEAKMLM-----------------AKMRL---NGFKDNVSTHKSMLK 304
+I GL VDE L+ A MRL N K + H+ L+
Sbjct: 857 KVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMRLAAANSTKGALEDHE--LR 914
Query: 305 GLCV-VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
GL V G+ Q G + N++ + VV+ + K+ + I +L+
Sbjct: 915 GLSVNHGELTQLSGLVNNLISVGLGCVATFAAVVLEDNVLMEKAWQDIGILR 966
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 174/347 (50%), Gaps = 40/347 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L S++SL+GVL R + A F ++ + +VP +V YT +I G+C+ G + +A K+
Sbjct: 397 LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV-IYTILIDGFCRNGALSDALKMR 455
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M + +++ YNT +NG CKK +A NEM+ RG P+ T+ +I G C +
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKD 515
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D+A L M K + T+ +++ G C G+ +A +++ ++ PD SY
Sbjct: 516 GNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISY 575
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTV---------------------------- 366
V+NGFC G EA++L +M +G++P +
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635
Query: 367 -------FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
FS+N + ++ L++A +L+ +M + N ++YN I+ G C A+G+MQ
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFC-AEGKMQ 694
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E ++ +MI G N D YS L+ G+ + N++ + EM+ +
Sbjct: 695 EAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 163/312 (52%), Gaps = 6/312 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+LL + R ++I A+E F ++ + V+P D+ +++++I + G + A F
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLP-DLVSFSSLIGVLARNGHLYQALMHFRE 422
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+ + Y +I+GFC+ G L +A K +EM+ RGC + +TYN + GLC
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+A ML +M G + T ++++G C G D+A+ ++ N+ PD +Y
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+GFCK G+ A L +M + + P S+ V +G L A+ L QM +
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V+ NT+I G C + G M + + +MI +G D Y+ L+ GY +E N+E
Sbjct: 603 IRPNLVTCNTLIKGYCRS-GDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 457 MQIAHEMVTKKG 468
+ +EM K+G
Sbjct: 662 FILINEM-EKRG 672
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 157/276 (56%), Gaps = 5/276 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+ L L + A+ F+++V+ +VP D T+TT+IRGYCK G ++ A +F+
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVP-DFYTFTTLIRGYCKDGNMDKALNLFEA 527
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KP+ + YNT+I+GFCK GE+ AK+ ++M+ + P+ ++Y ++ G C +G
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L +M G + N+ T +++KG C G +A YL ++ + PD SY
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+ K ++A L+ EM RGL+ + ++N + G++ A +L++M ++
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
P+ +Y+++I G +++ M++ D M++ G
Sbjct: 708 INPDGATYSSLING-HVSQDNMKEAFRFHDEMLQRG 742
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 183/419 (43%), Gaps = 77/419 (18%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
D + ++A R +A + + AC N LLG LVR + LA E +
Sbjct: 191 DLLVRTYVQAKKLREGSEAFQILRRKGVSVSINAC----NKLLGGLVRTGWVDLAWEIYG 246
Query: 183 QIVK-----------------------ENV-----------VPPDVSTYTTMIRGYCKMG 208
++V+ ENV V D+ TY T+I YC+ G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 209 MIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
++E A ++ F ++P LL YN ++ G CK G+ + AK + EM+ G PN TYN
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
++ +C + EA+ + +M G ++ + S++ L G QA+ + R + +
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA-------------------------- 359
+ PD Y ++I+GFC+ G +A+ + EM A
Sbjct: 427 GIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADA 486
Query: 360 ---------RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
RG+ P ++F + R ++G +D+A+ L + M + + P+ V+YNT+I G
Sbjct: 487 DMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
C A G M ++L D MIR D Y +L G+C G + + + +M+ K R
Sbjct: 547 FCKA-GEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 154/309 (49%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y+ L+ V+ ++ E F QI++ V ++ ++ G + G ++ A +++ +
Sbjct: 190 YDLLVRTYVQAKKLREGSEAF-QILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
++ N+ N M+N CK + E +++M +G + +TYN +I C G V
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA L+ G + + T+ ++L GLC +GK+D+A L +++ + P+ +Y +
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+ C+ EA + EM RG+ P + SF+++ +L NG L +A++ ++M +
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ V Y +I G C G + D + D M+ G +D Y+ L G C++ +
Sbjct: 429 VPDNVIYTILIDGFC-RNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487
Query: 458 QIAHEMVTK 466
+ +EMV +
Sbjct: 488 MLFNEMVER 496
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 132/246 (53%), Gaps = 5/246 (2%)
Query: 123 DFF-ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
DF+ + LI+ Y GN+ A+ F + +YN+L+ + + A+E +
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCK 238
+++++++P +S Y T++ G+C G++ A + D M ++PNL+ NT+I G+C+
Sbjct: 561 DDMIRKDIIPDHIS-YGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR 619
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G++ +A + +++M++ G P+ +YN +I G +++A +L+ +M G + N+ T
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +L G C GK +A LR ++E +NPD +Y +ING EA EM
Sbjct: 680 YNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEML 739
Query: 359 ARGLKP 364
RGL P
Sbjct: 740 QRGLVP 745
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 131/246 (53%), Gaps = 4/246 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
Y++ +L+ + ++ A F +V+ N+ PD TY T+I G+CK G + AK+++
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL-KPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M K P+ ++Y T++NGFC G L EA ++M+ +G RPN +T N +I G C +
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + +A ++KM NG + ++ +++ G ++A + + + + ++ +Y
Sbjct: 621 GDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITY 680
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++NGFC GK EA +L++M G+ P +++++ V + A +M Q
Sbjct: 681 NLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ 740
Query: 395 MDCLPN 400
+P+
Sbjct: 741 RGLVPD 746
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LIK Y G++ A + + +K I NG +SYN+L+ ++ +++ A +++ K
Sbjct: 613 LIKGYCRSGDMPKA--YEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ ++ TY ++ G+C G ++ A++V M + P+ Y+++ING + ++
Sbjct: 671 RGL-QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMK 729
Query: 244 EAKKCMNEMMNRGCRPNE 261
EA + +EM+ RG P++
Sbjct: 730 EAFRFHDEMLQRGLVPDD 747
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 188/357 (52%), Gaps = 6/357 (1%)
Query: 111 AASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV 169
AA L + SD ++ S LI AY + G ++ AI + ++ + + +L L+
Sbjct: 40 AAILETKGTQRSDIYVFSGLIAAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLM 99
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNL 226
++ KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++
Sbjct: 100 KLKYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 158
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
++YNT++NG+ + G+L+E + M+ G +P+ TY+ +I GLC ++D+A L +
Sbjct: 159 VSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 218
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M + G N T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G
Sbjct: 219 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 278
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
+A L+ EM +GLKP ++ + + G+LD A K+M Q + + V+Y
Sbjct: 279 LKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTA 338
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I G C +GR D E ++ M+ G D Y+ ++ +C+ G+V ++ EM
Sbjct: 339 LISGXCQ-EGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEM 394
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 159/291 (54%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F + + SYN+L+ +R L E F
Sbjct: 124 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGD--LDEGFXLK 181
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK +++A ++FD M VK PN + + T+I+G CK
Sbjct: 182 SXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M + G K + T+
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITY 301
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G D A + + +++ N+ D +Y +I+G C+ G+S +A +L+EM +
Sbjct: 302 TTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLS 361
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GLKP ++ + + G++ LLK+M + +P+ V+YN ++ G
Sbjct: 362 VGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 151/323 (46%), Gaps = 17/323 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVK-ENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
L SL+ V+V A F I++ + D+ ++ +I Y + G + +A +
Sbjct: 16 LLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIAAYLESGFLRDAIEC 75
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKC---------MNEMMNRGCRPNELTYNAM 267
+ + + ++T C+K LE K E++ G + +N +
Sbjct: 76 YRLTREHKFWVPFDT-----CRK-VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNIL 129
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
++ C +G + A+ + + G + +V ++ +++ G G D+ ++ + +
Sbjct: 130 MHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGV 189
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PDV +Y V+ING CK K D+A L EM +GL P +F + +NG +D A+
Sbjct: 190 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAME 249
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+ KQM P+ ++YNT+I GLC KG ++ L+D M G D Y+ L+ G
Sbjct: 250 IYKQMLSQSLSPDLITYNTLIYGLC-KKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGC 308
Query: 448 CEEGNVENVMQIAHEMVTKKGRL 470
C+EG++++ + M+ + RL
Sbjct: 309 CKEGDLDSAFEHRKRMIQENIRL 331
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 114/257 (44%), Gaps = 19/257 (7%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGC------------------RPNELTYNAMIY 269
+Y TMI+ C L EAK + +++R R + ++ +I
Sbjct: 2 SYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIA 61
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
+G + +A R + F T + +L+ L + F G+ ++E
Sbjct: 62 AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+ + ++++ FCK G A S+ + GL+P+V S+N + + G+LD L
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLK 181
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
M P+ +Y+ +I GLC + +M D +L D M+ G + ++ L+ G+C+
Sbjct: 182 SXMLASGVQPDVYTYSVLINGLC-KESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 450 EGNVENVMQIAHEMVTK 466
G V+ M+I +M+++
Sbjct: 241 NGRVDLAMEIYKQMLSQ 257
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 192/414 (46%), Gaps = 10/414 (2%)
Query: 66 TNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA----ASLLKNSNKL 121
+ P A+ FN A++ P T+ Y + D +A LL+ ++
Sbjct: 87 SGPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRV 146
Query: 122 SDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
S L+K + + A+ H+ ++ ++SYN LL L A++
Sbjct: 147 DAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDL 206
Query: 181 FHQIVKENVV-PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
+ + V PDV Y T+I G+ K G + A +F M + P+L+ Y+++++
Sbjct: 207 LRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHAL 266
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
CK +++A+ + +M+N+G P+ TYN +IYG G+ EA + +MR +V
Sbjct: 267 CKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDV 326
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
+++ LC GK +A + NPDV SY +++NG+ G + L
Sbjct: 327 VALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDL 386
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M G+ P + +FN + + G LD+A+++ +M P+ V+Y T+I LC G
Sbjct: 387 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRI-G 445
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+M D + ++MI G D Y CL++G+C G++ ++ E++ RL
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRL 499
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 191/374 (51%), Gaps = 8/374 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIKAY + G + A+ F++ + + +Y +++ L R+ + A E F+Q++ +
Sbjct: 402 LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG 461
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF-DVMT--VKPNLLAYNTMINGFCKKGELEEA 245
VVP D Y +I+G+C G + AK++ ++M ++ +++ + ++IN CK G + +A
Sbjct: 462 VVP-DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + +N G P+ + YN ++ G C+ G++++A + M G + NV + +++ G
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C +G+ D+ + R +++ + P Y ++I+G + G++ A EM G+
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 640
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+++ V R L +N D AI L K++ M+ + ++ NT+I G+ + R+++ +DL
Sbjct: 641 KCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR-RVEEAKDLF 699
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALL 485
+ RSG YS ++ +EG VE + M + L VV LL
Sbjct: 700 ASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSM--QNAGCEPDSRLLNHVVRELL 757
Query: 486 LM-WIVTGGSWISR 498
IV G+++S+
Sbjct: 758 KKNEIVRAGAYLSK 771
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 173/375 (46%), Gaps = 38/375 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I + G+V A F + Q L +Y+S++ L + ++ AE F Q+V +
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286
Query: 189 VVP----------------------------------PDVSTYTTMIRGYCKMGMIENAK 214
V+P PDV T++ CK G I+ A+
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
VFD M +K P++ +Y M+NG+ KG L + + M+ G P T+N +I
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 406
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
G +D+A ++ +MR +G K +V T+ +++ LC +GK D A+ +++ + PD
Sbjct: 407 ANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDK 466
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I GFC G +A L+ E+ G++ + F ++ L + G + A +
Sbjct: 467 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDL 526
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ P+ V YN ++ G C+ G+M+ + D M+ +G + Y L+ GYC+ G
Sbjct: 527 TVNVGLHPDAVVYNMLMDGYCLV-GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 585
Query: 452 NVENVMQIAHEMVTK 466
++ + + EM+ K
Sbjct: 586 RIDEGLSLFREMLQK 600
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 138/315 (43%), Gaps = 7/315 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P+ YH + +L + LIS ++ N +L F +I G V A
Sbjct: 464 PDKYAYHCLIQGFCTHGSLLKAKELIS---EIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
F + YN L+ V ++ A F +V + P+V Y T++
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI-EPNVVGYGTLVN 579
Query: 203 GYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
GYCK+G I+ +F M +KP+ + YN +I+G + G AK +EM G
Sbjct: 580 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 639
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N+ TY+ ++ GL N DEA L ++R K ++ T +M+ G+ + ++A
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
++ + + P +Y ++I K G +EA + M+ G +P N V R L++
Sbjct: 700 ASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKK 759
Query: 380 GELDRAILLLKQMPQ 394
E+ RA L ++ +
Sbjct: 760 NEIVRAGAYLSKIDE 774
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 4/229 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G + + F + Q YN ++ L A+ FH++ E+
Sbjct: 577 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT-ES 635
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
+ + TY+ ++RG K + A +F M VK +++ NTMI G + +EEA
Sbjct: 636 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 695
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + G P +TY+ MI L G V+EA+ + + M+ G + + +++
Sbjct: 696 KDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRE 755
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
L + +A YL + E N + + + ++++ F G E I L
Sbjct: 756 LLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 182/364 (50%), Gaps = 28/364 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++K + G ++ A F ++ ++ L SYN L LVR AE Q++ +
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKG 356
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P + +Y ++ G CK+GM+ +AK + +M V P+ + Y +++G+C G+++ A
Sbjct: 357 -IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAA 415
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + EMM C PN T N +++ L GR+ EA+ L+ KM G+ + T ++ G
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Query: 306 LCVVGKFDQAV--------------GYLRN---------VMEANMNPDVKSYEVVINGFC 342
LC G+ D+A+ G L N ++E N PD+ +Y ++NG C
Sbjct: 476 LCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLC 535
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K G+ EA +L EM L+P ++N + G++ A +LK M + C +
Sbjct: 536 KAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLE 595
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YN++I GL + K ++ ++ L+D M G + + Y+ ++ CE G VE+ + E
Sbjct: 596 TYNSLILGLGI-KNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDE 654
Query: 463 MVTK 466
M+ K
Sbjct: 655 MMQK 658
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 173/373 (46%), Gaps = 68/373 (18%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ R +E+ ++ +E +VP D+ T+ + I CK G + +A ++F M
Sbjct: 220 YNTIVSSFCREGRNDDSEKLVEKMREEGLVP-DIVTFNSRISALCKEGKVLDASRIFSDM 278
Query: 221 TV-------KPNLLAYNTMINGFCKKGELEEAK--------------------------- 246
+ +PN + YN M+ GFCK G LE+AK
Sbjct: 279 ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVR 338
Query: 247 --------KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ +M+++G P+ +YN ++ GLC G + +AK ++ M+ NG + T
Sbjct: 339 HGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVT 398
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +L G C VGK D A L+ +M N P+ + ++++ +G+ EA LL++M
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMN 458
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP-----------------------QM 395
+G + N + L +GELD+AI ++K M +
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+CLP+ ++Y+T++ GLC A GR + + L M+ D Y+ + +C++G + +
Sbjct: 519 NCLPDLITYSTLLNGLCKA-GRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISS 577
Query: 456 VMQIAHEMVTKKG 468
++ +M KKG
Sbjct: 578 AFRVLKDM-EKKG 589
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 158/364 (43%), Gaps = 29/364 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G V AA + + Y+ N LL L + I AEE ++ E
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKM-NEK 460
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK------------------------- 223
D T ++ G C G ++ A ++ M V
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 224 -PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P+L+ Y+T++NG CK G EAK EMM +P+ L YN I+ C G++ A
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFR 580
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
++ M G ++ T+ S++ GL + + + G + + E ++P++ +Y I C
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLC 640
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ GK ++A +LL EM + + P VFSF + + + D A + + + C
Sbjct: 641 EGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSI-CGQKEG 699
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
Y+ + L +A G++ +L++ ++ G L +Y L+ C++ +E I H+
Sbjct: 700 LYSLMFNEL-LAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHK 758
Query: 463 MVTK 466
M+ K
Sbjct: 759 MIDK 762
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 151/330 (45%), Gaps = 10/330 (3%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
F + +G L + ++ +LVR + EE + I+ ++ +S+ +++ +
Sbjct: 27 FSSPSEESHGISLAATPTMACILVRAKMHEEIEELHNLILSSSIQKTKLSSLLSVVSIFA 86
Query: 206 KMGMIENAKKVFDVMTV-----KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
K I+ A F + KP + YN ++ ++ +E +M+ G P
Sbjct: 87 KSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPE 146
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
T+N +I LC + VD A+ L +M G K N T +++G C G D+ + L
Sbjct: 147 TYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLN 206
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
++ + P+ Y +++ FC+ G++D++ L+++MR GL P + +FN+ L + G
Sbjct: 207 SMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEG 266
Query: 381 ELDRAILLLKQMPQMDCL----PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
++ A + M + L PN ++YN ++ G C G ++D + L + + + +
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV-GLLEDAKTLFESIRENDDLVS 325
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+G G + +M+ K
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMIDK 355
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
I + +G + +A F K +E C L +YNSL+ L N I ++
Sbjct: 565 FIHHFCKQGKISSA---FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM- 620
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGEL 242
+E + P++ TY T I+ C+ G +E+A + D M + PN+ ++ +I FCK +
Sbjct: 621 REKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDF 680
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ A++ ++ C E Y+ M L G++ +A L+ + GF+ +K +
Sbjct: 681 DMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDL 739
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
+ LC + + A G L +++ D + VI+G K+G EA + ++M
Sbjct: 740 VVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKM 794
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 163/339 (48%), Gaps = 7/339 (2%)
Query: 128 KLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ +++ RG + A+ F C + N L+ L + AE F +
Sbjct: 155 RRLRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALG 214
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEA 245
V TY TM+ GYC+ G IE+A+++ + M P+ +N +I C +G + +A
Sbjct: 215 PSATV----VTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDA 270
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++M++RGC P+ +TY+ ++ C +A L+ +MR G + ++ T+ ++
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+C G D+A+ L N+ PD +Y V+ C + E LL EM + P
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+FN + L + G +DRAI ++ M + C+ + V+Y++I+ GLC GR+ D +L+
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDV-GRVDDAVELL 449
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
R+ G D Y+ +LKG C E ++ EM+
Sbjct: 450 SRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEML 488
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 163/308 (52%), Gaps = 5/308 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+++N L+ L I A F ++ P V TY+ ++ CK A + D
Sbjct: 252 FTFNPLIRALCVRGRIPDALAVFDDMLHRGCSP-SVVTYSILLDATCKESGYRQAMALLD 310
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P+++ YN +IN C +G+++EA ++ + + GC+P+ +TY ++ LC +
Sbjct: 311 EMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSE 370
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R E + L+A+M N + T +++ LC G D+A+ + ++ E D+ +Y
Sbjct: 371 RWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYS 430
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++G C +G+ D+A+ LL +++ G KP ++ V + L + +RA L+ +M
Sbjct: 431 SILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCS 490
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
DC P+ V++NT++ LC KG + +V++M +G + D Y+C++ G C E +++
Sbjct: 491 DCPPDEVTFNTVVASLCQ-KGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDD 549
Query: 456 VMQIAHEM 463
M++ ++
Sbjct: 550 AMELLSDL 557
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 183/393 (46%), Gaps = 42/393 (10%)
Query: 112 ASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
A + N+ + + ++ + +G V AI + A + +Y+S+L L V
Sbjct: 380 AEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDV 439
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+ A E ++ K PD YTT+++G C E A+++ M P+ +
Sbjct: 440 GRVDDAVELLSRL-KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVT 498
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
+NT++ C+KG ++ A + + +M GC P+ +TYN +I GLC +D+A L++ ++
Sbjct: 499 FNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQ 558
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G K ++ T ++LKGLC V +++ A + N+M +N PD ++ VI C+ G
Sbjct: 559 SCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLT 618
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+AI LK M G P +++ V L++ G+ A+ LL M + P+ ++YNT+I
Sbjct: 619 QAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLITYNTVI 676
Query: 409 CGLCMAKGRMQDV----------------------------EDLVDRMIR-------SGH 433
L A G+M++ ED DR +R +G
Sbjct: 677 SNLTKA-GKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGL 735
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ D T Y+ +L G+C + + + MV+
Sbjct: 736 SPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSS 768
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 171/331 (51%), Gaps = 7/331 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YN L+ + + A + PD TYT +++ C + +++
Sbjct: 321 IVTYNVLINAMCNEGDVDEALNILSNLPSHGC-KPDAVTYTPVLKSLCGSERWKEVEELL 379
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
MT P+ + +NT++ C++G ++ A + ++ M GC + +TY++++ GLC
Sbjct: 380 AEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDV 439
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GRVD+A L+++++ G K + + ++LKGLC ++++A + ++ ++ PD ++
Sbjct: 440 GRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTF 499
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+ C+ G D AI ++++M G P + ++N + L +D A+ LL +
Sbjct: 500 NTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQS 559
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ V++NT++ GLC R +D E L+ M+RS D ++ ++ C++G +
Sbjct: 560 CGCKPDIVTFNTLLKGLC-GVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLT 618
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRVVDALL 485
++ +++ + G + + + VVDALL
Sbjct: 619 QAIETL-KIMAENGCVPNSSTY-SIVVDALL 647
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 153/305 (50%), Gaps = 11/305 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+++ L + + A Q+ EN PD+ TY +I G C I++A ++
Sbjct: 498 TFNTVVASLCQKGLVDRAIRVVEQM-SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSD 556
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ KP+++ +NT++ G C E+A++ M MM C P+ELT+N +I LC G
Sbjct: 557 LQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGL 616
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ +A + M NG N ST+ ++ L GK A+ L + N PD+ +Y
Sbjct: 617 LTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLITYNT 674
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV-FRILVENGELDRAILLLKQMPQM 395
VI+ K GK +EA+ LL+ M + GL P ++ ++ + + E+G DRA+ +L+++
Sbjct: 675 VISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGT-DRAVRMLRRVQDT 733
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVE-DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ YN ++ G C + R D+ D M+ SG D + Y LL+ G ++
Sbjct: 734 GLSPDTTFYNDVLLGFC--RDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLD 791
Query: 455 NVMQI 459
++
Sbjct: 792 EAKRL 796
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 121/238 (50%), Gaps = 6/238 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N+LL L V+ + AE+ +++ N PPD T+ T+I C+ G++ A +
Sbjct: 566 IVTFNTLLKGLCGVDRWEDAEQLMANMMRSNC-PPDELTFNTVITSLCQKGLLTQAIETL 624
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+M PN Y+ +++ K G+ + A + ++ M N P+ +TYN +I L
Sbjct: 625 KIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKA 682
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+++EA L+ M NG + +T++S+ G+C D+AV LR V + ++PD Y
Sbjct: 683 GKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFY 742
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
V+ GFC+ ++D AI M + G P ++ + L G LD A LL +
Sbjct: 743 NDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASL 800
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 104/204 (50%), Gaps = 2/204 (0%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+++ L + + A E +I+ EN P+ STY+ ++ K G + A ++
Sbjct: 603 TFNTVITSLCQKGLLTQAIETL-KIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSG 661
Query: 220 MT-VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
MT P+L+ YNT+I+ K G++EEA + M++ G P+ TY ++ YG+C D
Sbjct: 662 MTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTD 721
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
A ++ +++ G + + + +L G C + D A+ +++ + PD +Y +++
Sbjct: 722 RAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILL 781
Query: 339 NGFCKIGKSDEAISLLKEMRARGL 362
G DEA LL + + G+
Sbjct: 782 EALAYGGLLDEAKRLLASLCSLGV 805
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 115 LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC-LYSYNSLLGVLVRVNS 173
+ NS+ S + L+KA G +AA+ + NG L +YN+++ L +
Sbjct: 633 VPNSSTYS-IVVDALLKA----GKAQAALELL---SGMTNGTPDLITYNTVISNLTKAGK 684
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KKVFDVMTVKPNLLAY 229
++ A + +V N + PD +TY ++ G C+ + A ++V D + P+ Y
Sbjct: 685 MEEALDLLRVMVS-NGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDT-GLSPDTTFY 742
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N ++ GFC+ + A C M++ GC P+E TY ++ L G +DEAK L+A +
Sbjct: 743 NDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCS 802
Query: 290 NGFKD 294
G D
Sbjct: 803 LGVLD 807
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 9/169 (5%)
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMN--PDVKSYEVVINGFCKIGKSDEAISLLKEM 357
K L+ L G+ D+A+ ++ P V ++I C G+ +A +
Sbjct: 154 KRRLRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFA-- 211
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
A G TV ++N + G ++ A L+ MP P+ ++N +I LC+ +GR
Sbjct: 212 -ALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFP---PDTFTFNPLIRALCV-RGR 266
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ D + D M+ G + YS LL C+E M + EM K
Sbjct: 267 IPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAK 315
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 201/398 (50%), Gaps = 27/398 (6%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLK---------------------NSNKLSDFFI-SK 128
T Y + L +H ++S A SL++ + SD ++ S
Sbjct: 1 TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSG 60
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY + G ++ AI + ++ + + +L L+++ KL F+ +I+ E
Sbjct: 61 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL-EC 119
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P + + ++ +CK G I A+ VFD +T ++P++++YNT++NG+ + G+L+E
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 179
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + M+ G +P+ TY+ +I GLC ++D+A L +M + G N T +++ G
Sbjct: 180 FRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDG 239
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ EM +GLKP
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPD 299
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++ + ++G+LD A K+M Q + + V Y +I GLC +G D E ++
Sbjct: 300 KITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLC-REGXSVDAEKML 358
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 359 REMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 396
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 158/291 (54%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F + + SYN+L+ +R+ L E F
Sbjct: 126 YFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD--LDEGFRLK 183
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK I++A ++FD M VK PN + + T+I+G CK
Sbjct: 184 SAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKN 243
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M + G K + T+
Sbjct: 244 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITY 303
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G D A + + +++ N D Y +I+G C+ G S +A +L+EM +
Sbjct: 304 TTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLS 363
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GLKP ++ + + G++ + LLK+M + +P+ V+YN ++ G
Sbjct: 364 VGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 149/319 (46%), Gaps = 17/319 (5%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVK-ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
SL+ V+V A F I + + D+ ++ +I Y + G + +A + + +
Sbjct: 22 KSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLT 81
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKC---------MNEMMNRGCRPNELTYNAMIYGL 271
+ ++T C+K LE K E++ G + +N +++
Sbjct: 82 REHKFWVPFDT-----CRK-VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRF 135
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +G + A+ + + G + +V ++ +++ G +G D+ ++ + + PDV
Sbjct: 136 CKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDV 195
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y V+ING CK K D+A L EM +GL P +F + +NG +D A+ + KQ
Sbjct: 196 YTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQ 255
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M P+ ++YNT+I GLC KG ++ L+D M G D Y+ L+ G C++G
Sbjct: 256 MLSQSLSPDLITYNTLIYGLC-KKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDG 314
Query: 452 NVENVMQIAHEMVTKKGRL 470
+++ + M+ + RL
Sbjct: 315 DLDTAFEHRKRMIQENTRL 333
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 205/431 (47%), Gaps = 29/431 (6%)
Query: 58 VTKVIYEQTNPYHALFFFNWASN-PNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
V K++ + NP+ AL F+ + P Y HT + I L L++ A +
Sbjct: 13 VIKLLKSEKNPHSALSIFDSVTRFPG-----YSHTPYVFHHILKRLFDPKLVAHAYAKNS 67
Query: 117 NSNKLSDFF---------------ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSY 161
++ D F + L+ A + A +F + + L +Y
Sbjct: 68 MPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTY 127
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N L+ + R A+E + + + PDV +Y T+I K G + +A K+FD M
Sbjct: 128 NILIKISCRKKQFDKAKELLNWMWGQGF-SPDVFSYGTLINSLAKNGYMSDALKLFDEMP 186
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM-NRGCRPNELTYNAMIYGLCINGRV 277
V P++ YN +I+GF KKG++ A + ++ PN +YN MI GLC G+
Sbjct: 187 ERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKF 246
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DE+ + +M+ N ++ T+ +++ GLC G D A + + E ++PDV Y +
Sbjct: 247 DESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTM 306
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+NG+ + G+ +E + L K M G + TV S+N + R L EN ++D AI + + +P+ DC
Sbjct: 307 LNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDC 365
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ ++Y ++ GLC G + +++ +LD YS ++ G C EG ++ V
Sbjct: 366 CADSMTYGVLVHGLC-KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA 424
Query: 458 QIAHEMVTKKG 468
+ +M TK G
Sbjct: 425 GVLDQM-TKHG 434
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 168/321 (52%), Gaps = 6/321 (1%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+H+ K+ E G LY+Y++L+ L ++ A + ++ EN V PDV Y TM+ GY
Sbjct: 253 WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA-ENGVSPDVVVYNTMLNGYL 311
Query: 206 KMGMIENAKKVFDVMTVKP--NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+ G IE +++ VM + +++YN +I G + +++EA + + C + +T
Sbjct: 312 RAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMT 371
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKD-NVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
Y +++GLC NG +++A ++ + NG D + + SM+ GLC G+ D+ G L +
Sbjct: 372 YGVLVHGLCKNGYLNKALSILEEAE-NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 430
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ P+ VINGF + K ++A+ M ++G PTV ++N + L +
Sbjct: 431 TKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF 490
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
A L+K+M Q PN ++Y+ ++ GLC K ++ +L + + G D M++
Sbjct: 491 SEAYALVKEMLQKGWKPNMITYSLLMNGLCQGK-KLDMALNLWCQALEKGFKPDVKMHNI 549
Query: 443 LLKGYCEEGNVENVMQIAHEM 463
++ G C G VE+ +Q+ EM
Sbjct: 550 IIHGLCSSGKVEDALQLYSEM 570
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 131/258 (50%), Gaps = 4/258 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D Y++MI G C+ G ++ V D MT KPN N +INGF + +LE+A +
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
M+++GC P +TYN +I GL R EA L+ +M G+K N+ T+ ++ GLC
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
K D A+ +E PDVK + ++I+G C GK ++A+ L EM+ R P + +
Sbjct: 523 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTH 582
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + + + +RA + + Q P+ +SYN + GLC R+ D ++ +
Sbjct: 583 NTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCH-RISDAVGFLNDAV 641
Query: 430 RSGHNLDFTMYSCLLKGY 447
G ++ L++GY
Sbjct: 642 DRGVLPTAITWNILVQGY 659
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 136/296 (45%), Gaps = 4/296 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ G + A+ +A+ ++Y+S++ L R + Q+ K
Sbjct: 375 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 434
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P+ +I G+ + +E+A + F M K P ++ YNT+ING K EA
Sbjct: 435 C-KPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 493
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ EM+ +G +PN +TY+ ++ GLC ++D A L + GFK +V H ++ G
Sbjct: 494 YALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 553
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC GK + A+ + + N P++ ++ ++ GF K+ + A + + GL+P
Sbjct: 554 LCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPD 613
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ S+N + L + A+ L LP +++N ++ G KG M+ V
Sbjct: 614 IISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPV 669
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 196/401 (48%), Gaps = 23/401 (5%)
Query: 67 NPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFI 126
+P AL FF W + + HT Y + +L+ + + AA ++NS I
Sbjct: 82 HPLTALNFFKWIHYQH----GFIHTVHSYQPLLFILVRNGFLR-AAENVRNS------MI 130
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ ++ R F + E + SYN L VL R I F ++
Sbjct: 131 KSCVSSHEAR-------FVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLN 183
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-DVMTVK--PNLLAYNTMINGFCKKGELE 243
+ V P++ ++ TM+ +CK+G + AK F +M + Y ++I G+CK EL
Sbjct: 184 DGV-EPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELG 242
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A K M GC NE++Y +I+G C G++DEA L +M+ +G +V T+ ++
Sbjct: 243 DAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLV 302
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
C VGK +A+ + ++E + P+V +Y V+I+ FCK+GK DE + +L M +GL
Sbjct: 303 AAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLV 362
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+V FNA+ + G ++ AI +L M PN +YN +ICG C K M
Sbjct: 363 SSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKS-MDRAMA 421
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L+++M + + + Y+ L+ G C+ V++ ++ H M+
Sbjct: 422 LLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMI 462
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 175/359 (48%), Gaps = 14/359 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L+ A+ + G A+ +F + +ENG +Y+Y L+ +V + E +++
Sbjct: 301 LVAAFCEVGKETEALKFFEE--MVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLE 358
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ +V V + +I GYCK GM+E+A V D M V PN YN +I GFC+K ++
Sbjct: 359 KGLVS-SVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMD 417
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A +N+M PN +TYN +I+GLC VD A L M +GF + T + +
Sbjct: 418 RAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFI 477
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC +GK +QA ++ E + + Y +I+G+CK K +A L K M G
Sbjct: 478 DCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCF 537
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +FN + L + G+++ A+ L+ M + D P +Y TI+ + +
Sbjct: 538 PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTY-TILIEEILRESDFDRANM 596
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK-KGRLLKLKNFLTRVV 481
+D+MI SG + Y+ +K YC +G + A EMV K K + L +F+ V+
Sbjct: 597 FLDQMISSGCQPNVVTYTAFIKAYCRQGRLLE----AEEMVVKIKEEGILLDSFIYDVL 651
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 160/326 (49%), Gaps = 9/326 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
++ A+ GNV A +F ++ G C ++Y SL+ +++ + A + F + +
Sbjct: 196 MVNAHCKIGNVVVAKAYF--CGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQ 253
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E + +VS YT +I G+C++G I+ A ++F M P++ Y ++ FC+ G+
Sbjct: 254 EGCLRNEVS-YTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKET 312
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA K EM+ G PN TY +I C G++DE +++ M G +V +++
Sbjct: 313 EALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALI 372
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C G + A+ L ++ + P+ ++Y +I GFC+ D A++LL +M L
Sbjct: 373 DGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLS 432
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + ++N + L + +D A L M + +P+ ++ I LC G+++
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLC-KMGKVEQAHQ 491
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCE 449
+ + + + +Y+ L+ GYC+
Sbjct: 492 VFESLKEKHAEANEFLYTALIDGYCK 517
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 149/320 (46%), Gaps = 29/320 (9%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN+L+ L + + A H ++K+ VP D T+ I CKMG +E A +VF
Sbjct: 435 LVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVP-DQRTFCAFIDCLCKMGKVEQAHQVF 493
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ + K N Y +I+G+CK + +A M+ GC PN +T+N ++ GL
Sbjct: 494 ESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKE 553
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+V++A L+ M K V T+ +++ + FD+A +L ++ + P+V +Y
Sbjct: 554 GKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTY 613
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
I +C+ G+ EA ++ +++ G+ F ++ + G+LD A +L +M
Sbjct: 614 TAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFD 673
Query: 395 MDCLPNFVSYNTIICGLCMAK----------------------GRMQDVED---LVDRMI 429
C P+ +Y+ ++ L K ++ D E L ++M+
Sbjct: 674 TGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMV 733
Query: 430 RSGHNLDFTMYSCLLKGYCE 449
G + YS L+KG C+
Sbjct: 734 EQGCVPNVNTYSKLIKGLCK 753
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 154/347 (44%), Gaps = 18/347 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ G V+ A+ + + +++Y L+ ++R + A F Q++
Sbjct: 546 LLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSG 605
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP-----NLLAYNTMINGFCKKGELE 243
P+V TYT I+ YC+ G + A+++ V+ +K + Y+ ++N + G+L+
Sbjct: 606 C-QPNVVTYTAFIKAYCRQGRLLEAEEM--VVKIKEEGILLDSFIYDVLVNAYGCIGQLD 662
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + M + GC P+ TY+ ++ L I + ++ M + N DN + K
Sbjct: 663 SAFGVLIRMFDTGCEPSRQTYSILLKHL-IFEKYNKEGMGLDLNSTNISVDNANIWK--- 718
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+ F+ ++E P+V +Y +I G CK+ A L M+ G+
Sbjct: 719 -----IADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGIS 773
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P+ N++ + G + A+ LL M + + L + SY ++CGL +G + E+
Sbjct: 774 PSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGL-FEQGNQEKAEE 832
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ ++ G+N D ++ LL G +G V+ Q+ M RL
Sbjct: 833 IFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRL 879
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 144/313 (46%), Gaps = 23/313 (7%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++SY LL +LVR ++ AE V+ +++ VS++ A+ V
Sbjct: 103 VHSYQPLLFILVRNGFLRAAEN-----VRNSMIKSCVSSH--------------EARFVL 143
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+++T ++ +YN + + G ++E +M+N G PN +++N M+ C
Sbjct: 144 NLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKI 203
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G V AK + GF + T+ S++ G C + + A + + + SY
Sbjct: 204 GNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSY 263
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+GFC++GK DEA+ L +M+ G P V ++ + E G+ A+ ++M +
Sbjct: 264 TNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVE 323
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN +Y +I C G+M + +++ M+ G ++ L+ GYC+ G +E
Sbjct: 324 NGIEPNVYTYTVLIDYFCKV-GKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMME 382
Query: 455 NVMQIAHEMVTKK 467
+ + + M K
Sbjct: 383 DAICVLDSMKLNK 395
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 150 KQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
K +E G + +Y+ L+ L +V + LA F+ + KE+ + P + + +++ CK+
Sbjct: 731 KMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHM-KESGISPSENIHNSLLSSCCKL 789
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
GM E A ++ D M +L +Y ++ G ++G E+A++ +++ G +E+ +
Sbjct: 790 GMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVW 849
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
++ GL G VDE L M G + + TH
Sbjct: 850 KVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTH 884
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 166/311 (53%), Gaps = 5/311 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ ++ A E ++ + + PD TY T+I G+CK+G +E+A KVFD
Sbjct: 149 TYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDE 208
Query: 220 MTVK----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P+ + YN +I G+C G+L+ A + +M+ RG TYN +++ L ++
Sbjct: 209 MLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDA 268
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R +A ++ +M+ NGF +V T+ ++ G C G +A+ + + + +Y
Sbjct: 269 RASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYT 328
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I F + G+ E L +G++P V +NA+ G+++RA ++ +M +
Sbjct: 329 SLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKK 388
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ ++YNT++ G C+ GR+ + L+D M + G D Y+ L+ GY +G++++
Sbjct: 389 RIPPDDMTYNTLMRGFCLL-GRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKD 447
Query: 456 VMQIAHEMVTK 466
+++ EM+ K
Sbjct: 448 ALRVRDEMMDK 458
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 183/408 (44%), Gaps = 48/408 (11%)
Query: 88 YHHTTPCYTAITDVLLSHSLIS----IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAI 143
Y P T +++L H + A LL+ + + + +I + RG V+AA+
Sbjct: 108 YRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAAL 167
Query: 144 FWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
+ + E G Y+Y +L+ ++ ++ A + F +++ + V P Y +
Sbjct: 168 EVMREMR--ERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNAL 225
Query: 201 IRGYCKMGMIENAKKVFD-------VMTV------------------------------- 222
I GYC +G ++ A + + MTV
Sbjct: 226 IGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGF 285
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P++ YN +ING+CK+G ++A + EM +G R +TY ++IY G+V E
Sbjct: 286 SPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDR 345
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L G + +V + +++ C G ++A + + + + PD +Y ++ GFC
Sbjct: 346 LFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFC 405
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+G+ DEA +L+ EM RG++P + S+N + G++ A+ + +M P +
Sbjct: 406 LLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLM 465
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+YN +I GLC + + D E+L+ M+ G D + Y L++G E
Sbjct: 466 TYNALIQGLCKIR-QGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 154/308 (50%), Gaps = 4/308 (1%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
L K S + LI Y D G + A+ + Q + +YN L+ L
Sbjct: 210 LTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDAR 269
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYN 230
A ++ K N PDV TY +I GYCK G + A +VF+ M+ V+ + Y
Sbjct: 270 ASDAYAVLEEMQK-NGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYT 328
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
++I F +KG+++E + N + +G RP+ + YNA+I C G ++ A +MA+M
Sbjct: 329 SLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKK 388
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
+ T+ ++++G C++G+ D+A + + + + PD+ SY +I+G+ G +A
Sbjct: 389 RIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDA 448
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+ + EM +G PT+ ++NA+ + L + + D A L+K+M P+ +Y ++I G
Sbjct: 449 LRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEG 508
Query: 411 LCMAKGRM 418
L RM
Sbjct: 509 LTTEDERM 516
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
S A +L ++ L +FN + R L G+ RA+ LL+QMP+ PN V+YNT
Sbjct: 97 SAPAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNT 152
Query: 407 IICGLCMAKGRMQDVEDLVDRMI-RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+I G C A+GR+Q +++ M R G D Y+ L+ G+C+ G +E+ +++ EM+T
Sbjct: 153 VIAGFC-ARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLT 211
Query: 466 K 466
K
Sbjct: 212 K 212
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 222/432 (51%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ N HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHGAKNSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SY++L V++R
Sbjct: 70 DMPKKGLEWDEDMWVL-MIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRFMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVIT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+C+ ++EEA+K EM + P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +++ + P D + +I+ CK+G
Sbjct: 248 GYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSHCKVGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN I+ LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHMEPSAYNPIVEYLC-NNGQTSKAEALVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 158/322 (49%), Gaps = 15/322 (4%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHGAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +Y+A
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+C++ K +EA EM+ + ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD----VEDLVDRMIRSGHNLDFTMYSC 442
L+++M PN ++Y+T++ GLC A+ +M + ++++VD+ I N +++
Sbjct: 241 RLVEEMKGYGIKPNAITYSTLLPGLCNAE-KMSEARSILKEMVDKYIAPTDN---SIFMR 296
Query: 443 LLKGYCEEGNVENVMQIAHEMV 464
L+ +C+ GN++ + M+
Sbjct: 297 LISSHCKVGNLDAAADVLKAMI 318
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPIVEYLCNNGQTSKAEALVRQLMKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AY++++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYDSLVQSYLKKSEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 223/471 (47%), Gaps = 78/471 (16%)
Query: 70 HALFFFNWASNPNPNPN------------KYHHTTPCYTAITDVLLS-----HSLISIAA 112
HAL FF+ P P+ K H + ++ + LS ++I
Sbjct: 52 HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111
Query: 113 SLLKNSNKLSDFFIS-----------------KLIKAYGDRGNVKAAIFWFHQAKQIENG 155
+ L N N+L + F + LIK + A F + +++
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCT 171
Query: 156 ACLYSYNSLLGVLVRVNSI----KLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMI 210
+ +Y +L+ L +I KL +E + I + + P+V TY ++ G CK+G
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRE 231
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ AK++F+ M + P++++YN++I+GFC G+ EE+K+ ++EM+++G +P+ +T+N +
Sbjct: 232 DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I LC G+V EAK L+ M +G ++ T+ S+++G C+VG + A ++
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PDV SY V+ING+ K K +EA+ L EM G +P V +++++ + + G++D A
Sbjct: 352 EPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKK 411
Query: 388 LLKQMP-------------------QMDCL------------PNF----VSYNTIICGLC 412
L M + DCL NF + N +I GLC
Sbjct: 412 LFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLC 471
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
A G+++ +L +++ GH + Y+ ++ G+C EG V+ + +M
Sbjct: 472 KA-GKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 521
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 161/276 (58%), Gaps = 5/276 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N L+ L + + A++ +++ +VP D+ TY ++I G+C +G + +A+++F
Sbjct: 285 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVP-DLVTYNSLIEGFCMVGDLNSARELF 343
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P++++YN +ING+ K ++EEA K NEM+ G RPN +TY++++ G+ +
Sbjct: 344 VSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLA 403
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+VD+AK L + M+ +G +N T+ L GLC +A+ + +N ++++
Sbjct: 404 GKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENL 463
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G CK GK + A L +++ G +P V ++ + G++D+A +L+++M
Sbjct: 464 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEA 523
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
C P+ ++YNT++ G ++++V L+ RM +
Sbjct: 524 NGCTPDIITYNTLMRGF-YESNKLEEVVQLLHRMAQ 558
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 12/261 (4%)
Query: 204 YCKMGMIE--NAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
+CK G + +A F +M T P+L ++N +++G K + N+M G
Sbjct: 42 HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
+ T N ++ LC R+ E A + G+ N+ T+ +++KGLC+ + +A
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR------GLKPTVFSFNAV 372
+ + PDV +Y +I G C G + A+ L +EM KP V ++N +
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L + G D A L ++M +P+ +SYN++I G C A G+ ++ + L+D M+ G
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCA-GKWEESKRLLDEMLDQG 280
Query: 433 HNLDFTMYSCLLKGYCEEGNV 453
D ++ L+ C+EG V
Sbjct: 281 LQPDMVTFNVLIDTLCKEGKV 301
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A+ + +M + P + S+ +++G KI + SL +MR GL + N +
Sbjct: 52 HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L L + + PN V+YNT+I GLCM + R+ + L RM + G
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCM-EHRISEATRLFLRMQKLGC 170
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
D Y L+KG C GN+ +++ EM+ R
Sbjct: 171 TPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISR 206
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 163/309 (52%), Gaps = 7/309 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++++ L + + A E ++ E V PDV+TYT ++ C+ G ++ A ++F
Sbjct: 12 TYSTIISGLCKTGKVTEALEMVEEMT-EKGVNPDVATYTIIVDRLCRAGKVDEADELFHK 70
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + N +AYN +ING CK +E A K + EM ++G P+ +TYN ++ GLC G+
Sbjct: 71 MIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGK 130
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR--NVMEANMNPDVKSY 334
V EAK M G+ +V + +L L GK +A G + ++ + + PD+ +Y
Sbjct: 131 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITY 190
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+GFC++ K+DEA+ L K++ A+G P ++N++ L +D A + K+M
Sbjct: 191 NTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD 250
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C PN +Y+ ++ G C G M +L + M + D + + ++ C+ V+
Sbjct: 251 SGCAPNGATYSIVLSGHCRV-GNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVD 309
Query: 455 NVMQIAHEM 463
+ ++ EM
Sbjct: 310 DAHKVLEEM 318
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 157/286 (54%), Gaps = 6/286 (2%)
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
E PDV TY+T+I G CK G + A ++ + MT V P++ Y +++ C+ G+++
Sbjct: 3 EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVD 62
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + ++M+ RGC N + YNA+I GLC + ++ A L+ +M G++ + T+ ++L
Sbjct: 63 EADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTIL 122
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK--EMRARG 361
GLC +GK +A + ++ +PDV +Y +++ K GK EA L K +M R
Sbjct: 123 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRK 182
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P + ++N + + D A+ L K + +P+ V+YN+I+ GL K M +
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR-KSNMDEA 241
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
E++ +M+ SG + YS +L G+C GN+ +++ EM K+
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKR 287
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 46/365 (12%)
Query: 137 GNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
G V A FH K IE G A +YN+L+ L + +I+ A + ++ + P ++
Sbjct: 59 GKVDEADELFH--KMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNI 116
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVM---------------------------------- 220
TY T++ G C+MG + AK+ FD M
Sbjct: 117 -TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKT 175
Query: 221 ------TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
V P+L+ YNT+I+GFC+ + +EA K +++ +G P+ +TYN+++ GL
Sbjct: 176 MDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARK 235
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+DEA+ + KM +G N +T+ +L G C VG + + + E +PDV
Sbjct: 236 SNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLC 295
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
VI+ CK K D+A +L+EM G P V ++N + L + +D+A L M
Sbjct: 296 NAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD 355
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ VSY+ ++ GLC ++ D L DRMI D ++ L+ G C+ G ++
Sbjct: 356 NGCAPDIVSYSVVLNGLCKTN-KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLD 414
Query: 455 NVMQI 459
+
Sbjct: 415 EAKDL 419
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 174/388 (44%), Gaps = 40/388 (10%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI-VKENVVPPDVS 195
G V A +F + +YN LL L + + A F + + + V PD+
Sbjct: 129 GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLI 188
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY T+I G+C++ + A K+F + K P+ + YN+++ G +K ++EA++ +M
Sbjct: 189 TYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM 248
Query: 253 MNRGCRPNELTY-----------------------------------NAMIYGLCINGRV 277
++ GC PN TY NA+I LC +V
Sbjct: 249 VDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKV 308
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D+A ++ +M G +V T+ +L GLC D+A +++ PD+ SY VV
Sbjct: 309 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 368
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+NG CK K +A L M R L P V +FN + L + G+LD A LL M + +
Sbjct: 369 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNV 428
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
LP+ V+ T++ GLC K R + L M+ G D ++ +L G C EG + +
Sbjct: 429 LPDGVTCTTLMHGLCRDK-RTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQAL 487
Query: 458 QIAHEMVTKKGRLLKLKNFLTRVVDALL 485
MV G T +V+AL+
Sbjct: 488 LFFKSMVKSDGEFSPDVVTYTTLVNALI 515
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 149/276 (53%), Gaps = 7/276 (2%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N+++ +L + + A + ++ K VP DV TY ++ G CK +++ A ++F M
Sbjct: 296 NAVIDMLCKAKKVDDAHKVLEEMSKIGAVP-DVVTYNILLDGLCKTNLVDKAHELFSTMV 354
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
P++++Y+ ++NG CK ++ +A+ + M+ R P+ +T+N ++ GLC G++D
Sbjct: 355 DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLD 414
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EAK L+ M + + T +++ GLC + D+AV + ++E DV + +V+
Sbjct: 415 EAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVL 474
Query: 339 NGFCKIGKSDEAISLLKEM-RARG-LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
G C+ GK +A+ K M ++ G P V ++ + L+E G +D+A+ +QM
Sbjct: 475 AGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSG 534
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
C P++V+YNT++ GL +GR + L M G
Sbjct: 535 CAPDYVAYNTLMNGL-RKQGRHIQADRLTQAMKEKG 569
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 41/248 (16%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN LL L + N + A E F +V +N PD+ +Y+ ++ G CK + +A+ +FD
Sbjct: 329 TYNILLDGLCKTNLVDKAHELFSTMV-DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDR 387
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+++ +N +++G CK G+L+EAK ++ M P+ +T +++GLC + R
Sbjct: 388 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKR 447
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF------------------------ 312
DEA L M G +V H +L GLC GK
Sbjct: 448 TDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTY 507
Query: 313 -------------DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
DQAV Y + + + PD +Y ++NG K G+ +A L + M+
Sbjct: 508 TTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 567
Query: 360 RGLKPTVF 367
+G F
Sbjct: 568 KGFLSDCF 575
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 186/378 (49%), Gaps = 44/378 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI GN+ A F F + K +++G A L +Y+ L+ L+++ A + ++
Sbjct: 354 LIHGLCKHGNLDEA-FRFKE-KMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE 411
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ P +V Y T+I GYCKMG + +A ++ M K PN + N++I GFCK G++E
Sbjct: 412 KGFTPNEV-VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 470
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA-----KMLMAKMRLN-------- 290
+A+ + EM++RG N + +I+ LC+N R + A +ML+ MR N
Sbjct: 471 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 530
Query: 291 ----------------------GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
GF N+ T +++ GLC G +AV L+ ++E
Sbjct: 531 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 590
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
D +Y +I+G CK GK +E L EM +G++P F++N + + G+LD A+ L
Sbjct: 591 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 650
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+ D +PN +Y +I G C A ++++ E L ++ L+ +Y+ L++ YC
Sbjct: 651 WNECKSRDLVPNVYTYGVMIDGYCKAD-KIEEGEKLFTELLTQNLELNSVVYNTLIRAYC 709
Query: 449 EEGNVENVMQIAHEMVTK 466
GN ++ +M +K
Sbjct: 710 RNGNTVEAFKLHDDMRSK 727
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 180/342 (52%), Gaps = 5/342 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ S I A+ G V+ AI F +++ + +YN+L+ L + ++ A F +
Sbjct: 314 YLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEK 373
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+VK+ V + TY+ +I G K+ A V K PN + YNT+I+G+CK G
Sbjct: 374 MVKDGV-NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMG 432
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
L +A + +M+++G PN +T N++I G C G++++A+ ++ +M GF N
Sbjct: 433 NLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFT 492
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ LC+ +F+ A+ +LR ++ NM P+ ++ G CK GK +A+ L + +
Sbjct: 493 TIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 552
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G + + NA+ L + G + A+ LLK+M + + + ++YNT+I G C +G++++
Sbjct: 553 GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCC-KEGKVEE 611
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
L M++ G D Y+ L+ G C G ++ + + +E
Sbjct: 612 GFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE 653
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +++ L + + A F +++ N+ P D TT++ G CK G +A +++
Sbjct: 490 AFTTIIHWLCMNSRFESALRFLREMLLRNMRPND-GLLTTLVGGLCKEGKHSDAVELWFR 548
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ K NL+ N +I+G CK G ++EA + + +M+ RG +++TYN +I G C G+
Sbjct: 549 LLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 608
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+E L +M G + + T+ ++ G+C +GK D+AV ++ P+V +Y V
Sbjct: 609 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 668
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+CK K +E L E+ + L+ +N + R NG A L M
Sbjct: 669 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 728
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P +Y+++I G+C GRM+D + L+D M + G + Y+ L+ GYC+ G ++ V
Sbjct: 729 IPPTTATYSSLIHGMCNI-GRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKV 787
Query: 457 MQIAHEM 463
+ + EM
Sbjct: 788 VNVLQEM 794
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 176/355 (49%), Gaps = 8/355 (2%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVN 172
LL+N + +D ++ L+ G A+ WF ++ GA L + N+L+ L +
Sbjct: 515 LLRNM-RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK-GFGANLVTTNALIHGLCKTG 572
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAY 229
+++ A ++++ V D TY T+I G CK G +E K+ M ++P+ Y
Sbjct: 573 NMQEAVRLLKKMLERGFVL-DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTY 631
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +I+G C+ G+L+EA NE +R PN TY MI G C +++E + L ++
Sbjct: 632 NLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLT 691
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+ N + ++++ C G +A ++ + P +Y +I+G C IG+ ++
Sbjct: 692 QNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMED 751
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A L+ EMR GL P V + A+ + G++D+ + +L++M D PN ++Y +I
Sbjct: 752 AKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMID 811
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G + G M+ L+ M+ G D Y+ L G+C+EG +E +A + V
Sbjct: 812 GYSKS-GDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGV 865
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 160/306 (52%), Gaps = 6/306 (1%)
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVM 220
LL LV+ N ++ + F + V PDV ++T I +CK G +E+A ++F + +
Sbjct: 285 LLSSLVKANELEKSYWVFETM--RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKL 342
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
V PN++ YN +I+G CK G L+EA + +M+ G +TY+ +I GL + +EA
Sbjct: 343 GVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEA 402
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
++ + GF N + +++ G C +G A+ +++ +NP+ + +I G
Sbjct: 403 NSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQG 462
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
FCKIG+ ++A +L+EM +RG +F + L N + A+ L++M + PN
Sbjct: 463 FCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPN 522
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
T++ GLC +G+ D +L R++ G + + L+ G C+ GN++ +++
Sbjct: 523 DGLLTTLVGGLC-KEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLL 581
Query: 461 HEMVTK 466
+M+ +
Sbjct: 582 KKMLER 587
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV 222
+L+G L + A E + +++ E ++ T +I G CK G ++ A ++ M
Sbjct: 528 TLVGGLCKEGKHSDAVELWFRLL-EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE 586
Query: 223 KPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+ +L YNT+I+G CK+G++EE K EM+ +G P+ TYN +I+G+C G++DE
Sbjct: 587 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 646
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L + + NV T+ M+ G C K ++ ++ N+ + Y +I
Sbjct: 647 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIR 706
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
+C+ G + EA L +MR++G+ PT +++++ + G ++ A L+ +M + LP
Sbjct: 707 AYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 766
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
N V Y +I G C G+M V +++ M + + Y+ ++ GY + G+++ ++
Sbjct: 767 NVVCYTALIGGYCKL-GQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKL 825
Query: 460 AHEMVTK 466
HEMV K
Sbjct: 826 LHEMVGK 832
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 222/476 (46%), Gaps = 35/476 (7%)
Query: 4 PRRSLTNISQIPDQS-ILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVI 62
P L + +Q P L+ S+TS++ NPS + S Q L + V
Sbjct: 99 PPSPLPSQNQPPSSDHALLKSVTSILS-----NPS---LDSTQCKQLIPHLSPHQFDSVF 150
Query: 63 Y---EQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSN 119
+ NP AL FF +AS+ + T Y + L+ +S A LL
Sbjct: 151 FSVRRNVNPKTALNFFYFASDSC----GFRFTLRSYCVLMRSLIVSGFVSPARLLLI--- 203
Query: 120 KLSDFFISKLIKAYGDRGN----VKAAIFWFHQAKQIENGACLYSYNSLLGVL---VRVN 172
+L D KL +GD N + +A+ ++ E+G + + + L+ V R
Sbjct: 204 RLID---RKLPVLFGDPKNRHIEIASAMADLNEVG--ESGVAVAAVDLLIHVYCTQFRNV 258
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--VKPNLLAYN 230
+ A F + + V P V T T ++ K +E + VF+ M V P++ ++
Sbjct: 259 GFRNAIGVFRFLANKGVFP-TVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFS 317
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
T IN FCK G++E+A + +M G PN +TYN +I+GLC +G +DEA KM +
Sbjct: 318 TAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD 377
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G + T+ ++ GL + KF++A L+ +E P+ Y +I+G+CK+G +A
Sbjct: 378 GVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDA 437
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+ + +M ++G+ P + N++ + + G++++A +L++M N ++ TII
Sbjct: 438 LRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHW 497
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LCM R + + M+ + + + L+ G C+EG + +++ ++ K
Sbjct: 498 LCM-NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 552
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 128/254 (50%), Gaps = 41/254 (16%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF- 217
++YN L+ + R+ + A +++ ++VP +V TY MI GYCK IE +K+F
Sbjct: 629 FTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP-NVYTYGVMIDGYCKADKIEEGEKLFT 687
Query: 218 DVMT--VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+++T ++ N + YNT+I +C+ G EA K ++M ++G P TY+++I+G+C G
Sbjct: 688 ELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIG 747
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP------ 329
R+++AK L+ +MR G NV + +++ G C +G+ D+ V L+ + +++P
Sbjct: 748 RMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYT 807
Query: 330 -----------------------------DVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
D +Y V+ NGFCK GK +E LL E
Sbjct: 808 VMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG-KLLAE-DGV 865
Query: 361 GLKPTVFSFNAVFR 374
G +F + FR
Sbjct: 866 GFNSPLFLIHEAFR 879
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 190/395 (48%), Gaps = 44/395 (11%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
S+ A +LK + + LIK +G V A+ FH K + G SY +L+
Sbjct: 115 SVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKAL-HFHD-KLLAQGIKFDQVSYGTLIN 172
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
+ ++ + A + +I + P+V Y T+I CK ++ A +F MT K
Sbjct: 173 GVCKIGDTRGAIKLVRKI-DGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGIS 231
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
+++ Y T+I GFC +L+EA +NEM+ + PN TYN ++ LC G+V EAK +
Sbjct: 232 ADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNV 291
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+A M K +V T+ +++ G +V + +A + + PDV SY ++INGFCK
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCK 351
Query: 344 IGKSDEAISLLKEM-----------------------------------RARGLKPTVFS 368
DEA++L KEM R RG+ V +
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVIT 411
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N++ L +NG LDRAI L +M P ++ ++ GLC GR++D ++ +
Sbjct: 412 YNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKG-GRLKDAQEAFQDL 470
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G++LD Y+ ++ G+C++G +E + + +M
Sbjct: 471 LTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKM 505
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 175/345 (50%), Gaps = 9/345 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLK--NSNKLSDFFIS--KLIKAYGDRGNVKAAIFWFHQAK 150
Y I D L + L+S A L + +S ++ LI + +K AI ++
Sbjct: 202 YNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMV 261
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+Y+YN L+ L + +K A+ ++K V PDV TY+T++ GY + +
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKA-CVKPDVITYSTLMDGYFLVYEL 320
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ VF+ M+ V P++ +Y +INGFCK ++EA EM + P +TY+++
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC +GR+ L+ +MR G NV T+ S++ GLC G D+A+ + + +
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGI 440
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P ++ ++++G CK G+ +A +++ +G V+ +N + + G L+ A+
Sbjct: 441 RPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALT 500
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+L +M + C+PN V+++ II L K E L+ +MI G
Sbjct: 501 MLSKMEENGCVPNAVTFDIIINAL-FKKDENDKAEKLLRQMICRG 544
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 184/399 (46%), Gaps = 75/399 (18%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
NV A+ F++ + + + +N +L ++ A H++ + + PD+ T
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGI-QPDLITL 97
Query: 198 TTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+I +C MG I V + +P+ + + T+I G C KG++ +A ++++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157
Query: 255 RGCRPNELTYNAMIYGLC--------------INGR---------------------VDE 279
+G + ++++Y +I G+C I+GR V E
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L ++M G +V T+ +++ G C+ K +A+G L ++ +NP+V +Y ++++
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFS--------------------FNAV------- 372
CK GK EA ++L M +KP V + FNA+
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTP 337
Query: 373 ----FRILV----ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ IL+ +N +D A+ L K+M Q + +P V+Y+++I GLC + GR+ V DL
Sbjct: 338 DVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS-GRISYVWDL 396
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+D M G + Y+ L+ G C+ G+++ + + ++M
Sbjct: 397 IDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKM 435
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 154/333 (46%), Gaps = 20/333 (6%)
Query: 37 SPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYT 96
+ K IS+ + +L G I +K+ A+ N NPN Y Y
Sbjct: 226 TAKGISADVVTYTTLIYGFCIASKL-------KEAIGLLNEMVLKTINPNVY-----TYN 273
Query: 97 AITDVLLSHSLI----SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQI 152
+ D L + ++ A +LK K S L+ Y +K A F+ +
Sbjct: 274 ILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLM 333
Query: 153 ENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIEN 212
++SY L+ + + A F ++ ++N+VP + TY+++I G CK G I
Sbjct: 334 GVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVP-GIVTYSSLIDGLCKSGRISY 392
Query: 213 AKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
+ D M + N++ YN++I+G CK G L+ A N+M ++G RP T+ ++
Sbjct: 393 VWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLD 452
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
GLC GR+ +A+ + G+ +V + M+ G C G ++A+ L + E P
Sbjct: 453 GLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVP 512
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ +++++IN K ++D+A LL++M RGL
Sbjct: 513 NAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 132/304 (43%), Gaps = 54/304 (17%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M P ++ +N +++ F K A + + +G +P+ +T N +I C G++
Sbjct: 53 MRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITF 112
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
++AK+ G++ + T +++KGLC+ G+ ++A+ + ++ + D SY +IN
Sbjct: 113 GFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLIN 172
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G CKIG + AI L++++ R KP
Sbjct: 173 GVCKIGDTRGAIKLVRKIDGRLTKP----------------------------------- 197
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
N YNTII LC + + + L M G + D Y+ L+ G+C ++ + +
Sbjct: 198 NVEMYNTIIDALCKYQ-LVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGL 256
Query: 460 AHEMV------------------TKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVF 501
+EMV K+G++ + KN L ++ A + ++T + + +
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFL 316
Query: 502 VHQV 505
V+++
Sbjct: 317 VYEL 320
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 176/346 (50%), Gaps = 39/346 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+LLG L + + A F + + P DV TYTT+I +CKM E A + +
Sbjct: 103 TYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDV-TYTTLIDVFCKMCQFETAYGLLQL 161
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P + +Y ++ING CK ++++A + EM GC+P+ +TYN +I+GLC+ R
Sbjct: 162 MASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQR 221
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EAK L+ M NGF+ + T ++++GLC + +A + + + PD+ ++ V
Sbjct: 222 LHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTV 281
Query: 337 VINGFC------------------------------KIGKS---DEAISLLKEMRARGLK 363
+++ C ++G+ D A LL++M RG+
Sbjct: 282 LVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVP 341
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++ A F+ L + E RA ++M + P+ V+YN ++ G C A R+ E
Sbjct: 342 PNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKAD-RLDMAEK 400
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+V M +SG + Y+ L+ +C +G VE + ++ H MV+ +GR
Sbjct: 401 MVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVS-RGR 445
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 141/271 (52%), Gaps = 15/271 (5%)
Query: 207 MGMIENAKKVFDVMTV---------KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+ ++E A++ ++ V KPN L+Y ++ C+ G++++A + EM
Sbjct: 7 LDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKL 66
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ TYN +I LC R+ A M + +V T+ ++L GLC G+ QA
Sbjct: 67 VPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACS 122
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
++ A + P +Y +I+ FCK+ + + A LL+ M +R PTV+S+ ++ L
Sbjct: 123 LFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLC 182
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+N ++D+A L ++M C P+ V+YNT+I GLC+ K R+ + +DL+ M+ +G D
Sbjct: 183 KNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCV-KQRLHEAKDLLTVMVENGFQPDK 241
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
++ L++G C ++ + M K+G
Sbjct: 242 ITFTALIEGLCTTDRIKEAFVLFQGM-AKQG 271
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 153/372 (41%), Gaps = 71/372 (19%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SY L+ L R I A ++ +E +VP DV TY +I CK I A + F+
Sbjct: 37 SYCYLVKALCRTGKIDKACSTIAEMAREKLVP-DVFTYNVVIDTLCKARRISRAIEFFET 95
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEA---------------------------KKCMNE- 251
M +P+++ YNT++ G CK G + +A K C E
Sbjct: 96 MP-EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFET 154
Query: 252 -------MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
M +R C P +Y ++I GLC N +VD+A L +M+L G K + T+ +++
Sbjct: 155 AYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIH 214
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLCV + +A L ++E PD ++ +I G C + EA L + M +G P
Sbjct: 215 GLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAP 274
Query: 365 ---------------------------------TVFSFNAVFRILVENGELDRAILLLKQ 391
V + +FR L DRA LL++
Sbjct: 275 DLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQK 334
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + PN V+Y GL K M+ + RM+ G D Y+ L+ G+C+
Sbjct: 335 MARRGVPPNVVTYTAFFKGLGDWKEGMRAYREF-RRMLEQGIEPDMVAYNVLVDGFCKAD 393
Query: 452 NVENVMQIAHEM 463
++ ++ M
Sbjct: 394 RLDMAEKMVRYM 405
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 37/292 (12%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+YSY S++ L + + A + F ++ K PD TY T+I G C + AK +
Sbjct: 171 VYSYCSIINGLCKNRKVDQAYQLFEEM-KLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLL 229
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
VM +P+ + + +I G C ++EA M +GC P+ +T+ ++ LCI
Sbjct: 230 TVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIL 289
Query: 275 GRV---------------------------------DEAKMLMAKMRLNGFKDNVSTHKS 301
++ D A L+ KM G NV T+ +
Sbjct: 290 RKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTA 349
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
KGL + +A R ++E + PD+ +Y V+++GFCK + D A +++ M G
Sbjct: 350 FFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSG 409
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
L P + ++N + G+++ LL M P+ +++T++ GL M
Sbjct: 410 LPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFM 461
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY--CKMGMIENAKKVFD 218
Y + L R A ++ + V PP+V TYT +G K GM A + F
Sbjct: 312 YTPIFRELGRRRGFDRAARLLQKMARRGV-PPNVVTYTAFFKGLGDWKEGM--RAYREFR 368
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M ++P+++AYN +++GFCK L+ A+K + M G PN +TYN ++ C G
Sbjct: 369 RMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKG 428
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
+V+ L+ M G + +V+T +++ GL +VG+ D A +L M
Sbjct: 429 KVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAM 476
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL 164
H + +++N + + LI+ +K A F + L ++ L
Sbjct: 223 HEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVL 282
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--- 221
+ L + ++ A + P V YT + R + + A ++ M
Sbjct: 283 VSKLCILRKLRPA---LSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRG 339
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
V PN++ Y G E A + M+ +G P+ + YN ++ G C R+D A+
Sbjct: 340 VPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAE 399
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
++ M +G N+ T+ +++ C GK + L ++ PDV ++ ++ G
Sbjct: 400 KMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGL 459
Query: 342 CKIGKSDEAISLLKEMRARG 361
+G++D A S L ++G
Sbjct: 460 FMVGQADAAYSFLNLAMSQG 479
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 202/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H +I A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+SD ++ S LI AY + G ++ AI + K+ + + +J L+++ KL
Sbjct: 63 ISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 224/470 (47%), Gaps = 42/470 (8%)
Query: 4 PRRSLTNISQI----PDQSILVTSITSVIQRLNPQ-NPSPKNISSQPLDQFSLCLGSNIV 58
P S+ ++ QI + L + S++ R N Q +PS + + L + V
Sbjct: 20 PYSSIASLPQILSLDSEPVDLSAQLLSILSRPNWQKHPSLRKLLPS--------LTPSHV 71
Query: 59 TKVIYEQTNPYHALFFFNW-ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAA----S 113
+ + +P AL FFNW A P + H Y+++ ++L+ L+ +A S
Sbjct: 72 SSLFAFNLDPQTALSFFNWIALRPG-----FKHNVHSYSSMLNILIRARLLGVAEKIRIS 126
Query: 114 LLKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
++K+ + D F+ ++ + G K L YN++L L +
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFK-------------PTLRCYNTILMSLSKFL 173
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAY 229
I + + +++ N + P++ T+ M+ GYCK+G + A+ + + P+ Y
Sbjct: 174 LIDEMKTVYLELLN-NQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTY 232
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
++I G C+ ++ A + M +GC+ NE++Y +I+GLC GR++EA L A M
Sbjct: 233 TSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTE 292
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+ V T+ ++ L G+ +A+ + E P+V +Y V+I+G CK K DE
Sbjct: 293 DNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDE 352
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A +L EM +GL P+V ++NA+ + G +D A +L M C PN +YN +IC
Sbjct: 353 ARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC 412
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
GLC K ++ L+++M+ + Y+ L+ G C+ ++E+ ++
Sbjct: 413 GLC-KKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 181/344 (52%), Gaps = 9/344 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ LI + G + A+ F A E+ C + +Y L+ L A F+++
Sbjct: 268 TNLIHGLCEAGRINEALKLF--ADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
KE P+V TYT +I G CK ++ A+K+ M+ K P+++ YN +I+G+CK+G
Sbjct: 326 -KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+++A + ++ M + C PN TYN +I GLC +V +A L+ KM ++ T+ S
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C V + A L + E + PD +Y V I+ CK G+ +EA +L ++A+G
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+K + A+ + G++D A LL++M CLPN +YN +I GLC K +M++
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK-KMKEA 563
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
LV +M+ G Y+ L+ ++G ++ +++ + MV+
Sbjct: 564 SSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 173/361 (47%), Gaps = 40/361 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A G A+ F++ K+ +++Y L+ L + N + A + ++ ++
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------------------- 221
++P V TY +I GYCK GMI++A ++ D+M
Sbjct: 365 LIP-SVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423
Query: 222 -----------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+ P+L+ YN++I+G CK +LE A + ++ M G P++ TY+ I
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC GRV+EA L ++ G K N + +++ G C VGK D A L ++ P+
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPN 543
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+Y V+I G CK K EA SL+ +M G+KPTV ++ + ++++G D A+ +
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
M + P+ +Y + ++G +++V+D++ +M G D Y+ L+ GY
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAY-FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARL 662
Query: 451 G 451
G
Sbjct: 663 G 663
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 178/394 (45%), Gaps = 27/394 (6%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y A+ D +I A +L NS + ++LI + V A+ ++
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + L +YNSL+ +VN ++ A ++ EN + PD TY+ I CK G +
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLL-SLMNENGLVPDQWTYSVFIDTLCKEGRV 490
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
E A +FD + VK N + Y +I+G+CK G+++ A + M+N C PN TYN +
Sbjct: 491 EEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL 550
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC ++ EA L+AKM G K V T+ ++ + G FD A+ +++
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGY 610
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PDV +Y ++ + G +E ++ +M G+ P + ++ + G RA
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFD 670
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED------------------LVDRMI 429
LK M C P+ + +I L + RM++ L ++M+
Sbjct: 671 FLKCMVDTGCKPSLYIVSILIKNLS-HENRMKETRSEIGIDSVSNTLEYEIALKLFEKMV 729
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G +D ++Y L+ G+C++ +E + H M
Sbjct: 730 EHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 763
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 157/414 (37%), Gaps = 100/414 (24%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ D L + A +L + K ++ + LI Y G + A + +
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVA---YSLLE 533
Query: 151 QIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP---------------- 191
++ N ACL Y+YN L+ L + +K A +++ V P
Sbjct: 534 RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593
Query: 192 ------------------PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYN 230
PDV TYT + Y GM+E V M + P+L+ Y
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653
Query: 231 TMINGFCKKG-------------------------------------------------- 240
+I+G+ + G
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713
Query: 241 ---ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
E E A K +M+ GC + Y A+I G C R++EA+ L+ M+ G +
Sbjct: 714 NTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 773
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
+ S+L C +G + +AV + ++E + P ++SY++++ G G +++A ++ +
Sbjct: 774 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGL 833
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+ G ++ + L++ +D L+ M + C PN ++Y+ +I GL
Sbjct: 834 LSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 127/309 (41%), Gaps = 46/309 (14%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++SY+S+L +L+R + +AE+ ++K DV + R KM NA F
Sbjct: 101 VHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFR---KM----NADGEF 153
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
KP L YNT++ K ++E K E++N P
Sbjct: 154 ---KFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISP------------------ 192
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
N+ T +M+ G C +G +A Y +++A ++PD +Y +
Sbjct: 193 -----------------NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSL 235
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I G C+ D A + M +G + S+ + L E G ++ A+ L M + +C
Sbjct: 236 ILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNC 295
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P +Y +I L GR + +L + M G + Y+ L+ G C+E ++
Sbjct: 296 CPTVRTYTVLIYALS-GSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEAR 354
Query: 458 QIAHEMVTK 466
++ EM K
Sbjct: 355 KMLSEMSEK 363
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 177/344 (51%), Gaps = 11/344 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
++ A D+G+V A+ H + + + C + SYN++L L +E ++V
Sbjct: 198 VLNAICDQGSVDEAL---HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV 254
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ PP++ T+ T+I C+ G+ E +V M P++ Y T+I+G CK+G L
Sbjct: 255 R-MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHL 313
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E A + +N M + G +PN + YN ++ GLC R +E + L+A+M + T +
Sbjct: 314 EVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 373
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ C G D+ + L ++E PDV +Y VINGFCK G DEA+ LLK M A G
Sbjct: 374 VDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 433
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KP S+ V + L A L+ QM Q C N +++NT+I LC KG ++
Sbjct: 434 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC-KKGLVEQAI 492
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L+ +M+ +G + D YS ++ G + G + +++ + MV K
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK 536
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 164/305 (53%), Gaps = 5/305 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N+L+ L R + E Q+V E+ PD+ Y T+I G CK G +E A ++
Sbjct: 262 IVTFNTLISYLCRNGLFERVHEVLAQMV-EHGCTPDIRMYATIIDGICKEGHLEVAHEIL 320
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +KPN++ YNT++ G C EE ++ + EM ++ C +++T+N ++ C N
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G VD L+ +M G +V T+ +++ G C G D+AV L+++ P+ SY
Sbjct: 381 GLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+V+ G C + +A L+ +M +G +FN + L + G +++AI LLKQM
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ +SY+T+I GL A G+ + +L++ M+ G + + +YS + EG +
Sbjct: 501 NGCSPDLISYSTVIDGLGKA-GKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRIN 559
Query: 455 NVMQI 459
V+Q+
Sbjct: 560 KVIQM 564
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 170/321 (52%), Gaps = 8/321 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+LL L + EE ++ ++ P D T+ ++ +C+ G+++ ++ + M
Sbjct: 335 YNTLLKGLCSAERWEETEELLAEMFDKDC-PLDDVTFNILVDFFCQNGLVDRVIELLEQM 393
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ Y T+INGFCK+G ++EA + M GC+PN ++Y ++ GLC R
Sbjct: 394 LERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERW 453
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A+ LM++M G N T +++ LC G +QA+ L+ ++ +PD+ SY V
Sbjct: 454 VDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 513
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K GK+DEA+ LL M +G+ P ++++ L G +++ I + +
Sbjct: 514 IDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTI 573
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ V YN +I LC +G + + + M+ SG + + Y+ L++G EG V+
Sbjct: 574 RSDAVLYNAVISSLC-KRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 632
Query: 458 QIAHEMVTKKGRLLK--LKNF 476
++ E+ + KG L K +K+F
Sbjct: 633 EMLTELCS-KGALRKHLMKHF 652
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 128/270 (47%), Gaps = 1/270 (0%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
Y M+ GYC+ G +E+A+++ + V PN Y ++ C +G + +A ++EM RG
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C P Y+ ++ C G A ++ + G +V +L +C G D+A+
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 212
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
LR++ PDV SY V+ G C + L++EM P + +FN + L
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
NG +R +L QM + C P+ Y TII G+C +G ++ ++++RM G +
Sbjct: 273 CRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGIC-KEGHLEVAHEILNRMPSYGLKPN 331
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ LLKG C E ++ EM K
Sbjct: 332 VVCYNTLLKGLCSAERWEETEELLAEMFDK 361
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 138/269 (51%), Gaps = 8/269 (2%)
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+++IR C G A + ++AYN M+ G+C+ G+LE A++ +
Sbjct: 62 SSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAV---PV 118
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
PN TY ++ LC GR+ +A ++ +M G + +L+ C G F AV
Sbjct: 119 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVR 178
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L ++ DV + +V+N C G DEA+ LL+++ + G +P V S+NAV + L
Sbjct: 179 VLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLC 238
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
L+++M +M C PN V++NT+I LC G + V +++ +M+ G D
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCR-NGLFERVHEVLAQMVEHGCTPDI 297
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MY+ ++ G C+EG++E +AHE++ +
Sbjct: 298 RMYATIIDGICKEGHLE----VAHEILNR 322
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 170/411 (41%), Gaps = 111/411 (27%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ R ++ A + VPP+ TY ++R C G I +A V D M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP----VPPNAYTYFPVVRALCARGRIADALAVLDEM 148
Query: 221 T-----------------------------VKPNLLAY---------NTMINGFCKKGEL 242
V +L A N ++N C +G +
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+EA + ++ + GC P+ ++YNA++ GLC+ R + LM +M N+ T ++
Sbjct: 209 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ LC G F++ L ++E PD++ Y +I+G CK G + A +L M + GL
Sbjct: 269 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 328
Query: 363 KPTVFSFNAV-------------------------------FRILV----ENGELDRAIL 387
KP V +N + F ILV +NG +DR I
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLC-----------------------------MAKG-- 416
LL+QM + C+P+ ++Y T+I G C + KG
Sbjct: 389 LLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448
Query: 417 ---RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
R D EDL+ +MI+ G L+ ++ L+ C++G VE +++ +M+
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 499
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 166/314 (52%), Gaps = 5/314 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++N ++ R N+++ A E + +V+ P +VS Y +I G K+G ++ + K+
Sbjct: 45 VFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVS-YHILIHGLAKIGKLDESLKIL 103
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++ P++ AY++++ K ++ A +EM+ G P+ L + +I GLC
Sbjct: 104 SEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQA 163
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+V +A +M +G + NV + +L GLC G+ +QA + + +PDV +Y
Sbjct: 164 GKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTY 223
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++ CK + +E L + MRA G P V +F+ + L GEL++A+ + M +
Sbjct: 224 NTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 283
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C PN +Y T+I GLC A+ +Q +L ++M ++ D Y+ L+ GYC+ G+++
Sbjct: 284 AGCKPNKYTYTTLISGLCRAEKVIQ-ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMD 342
Query: 455 NVMQIAHEMVTKKG 468
++ EM G
Sbjct: 343 EAEKLYREMSGGAG 356
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 177/376 (47%), Gaps = 16/376 (4%)
Query: 95 YTAITDVLLSHSLISIAASL----LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+++ L + A+SL ++ + +LI G VK A F K
Sbjct: 118 YSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERF---K 174
Query: 151 QIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
Q+ C + YN LL L ++ A F ++ K + PDV TY T++ CK
Sbjct: 175 QMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEM-KSHSCSPDVVTYNTLLDAVCKA 233
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
+E K+F+ M PN++ ++T+I+G C+ GELE+A + M+ GC+PN+ TY
Sbjct: 234 RRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 293
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+I GLC +V +A+ L KM + + S++ G C G D+A R +
Sbjct: 294 TTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG 353
Query: 325 -ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
A + P + ++ +I+GFCK+GK A L+ EM +GL ++ + L +LD
Sbjct: 354 GAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLD 413
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A+ + KQM + L + VS + + GLC G + + + +SG + + L
Sbjct: 414 EALEVYKQMREKKFLLDPVSCVSFVGGLCKT-GNIDQAYAVFEATRKSGAVPNPETFRIL 472
Query: 444 LKGYCEEGNVENVMQI 459
+ + G VE+ ++
Sbjct: 473 SESLIKLGRVEDAQKL 488
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 151/283 (53%), Gaps = 4/283 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+++ + +V TY+++I+ K E + KV + M P++ A+N ++ GF +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+E+A++ M+ G +P+ ++Y+ +I+GL G++DE+ ++++M + G ++ + S
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+++ L + D A ++ +PD + +I G C+ GK +A K+M G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+P V +N + L +G+L++A L +M C P+ V+YNT++ +C A+ R+++
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKAR-RVEEG 239
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L + M +G+ + +S L+ G C G +E +++ M+
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 282
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 136/266 (51%), Gaps = 18/266 (6%)
Query: 148 QAKQIENGACLY-------------SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
+A+++E G L+ ++++L+ L R ++ A E F ++ E P+
Sbjct: 232 KARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML-EAGCKPNK 290
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
TYTT+I G C+ + A+++F+ MT + P+ +AYN++I G+CK+G ++EA+K E
Sbjct: 291 YTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYRE 350
Query: 252 MMN-RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M G +P +T+N +I G C G++ A L+A+M G + T++ ++ GL
Sbjct: 351 MSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRAT 410
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
K D+A+ + + E D S + G CK G D+A ++ + R G P +F
Sbjct: 411 KLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFR 470
Query: 371 AVFRILVENGELDRAILLLKQMPQMD 396
+ L++ G ++ A L++ D
Sbjct: 471 ILSESLIKLGRVEDAQKLMEPAKARD 496
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 5/208 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+Y +L+ L R + A E F ++ + +PPD Y ++I GYCK G ++ A+K++
Sbjct: 291 YTYTTLISGLCRAEKVIQARELFEKMT-QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYR 349
Query: 219 VMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M+ ++P ++ +NT+I+GFCK G+L A + + EM +G + TY +I GL
Sbjct: 350 EMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRA 409
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
++DEA + +MR F + + S + GLC G DQA ++ P+ +++
Sbjct: 410 TKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETF 469
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGL 362
++ K+G+ ++A L++ +AR +
Sbjct: 470 RILSESLIKLGRVEDAQKLMEPAKARDI 497
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
MR + + VF+++++ + LV+ + + + +L++M C P+ ++N ++ G +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSN- 59
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
M+ ++ M+ SG+ D Y L+ G + G ++ ++I EMV +G+ ++ +
Sbjct: 60 NMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVM-RGQTPSMQAY 118
Query: 477 LT--------RVVD--ALLLMWIVTGGSWISRFVF 501
+ R VD + L ++ GG R +F
Sbjct: 119 SSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMF 153
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 169/312 (54%), Gaps = 4/312 (1%)
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
G + +N+L+ VR + A F + + N PDV T++T++ G CK G+ +A
Sbjct: 343 GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSAL 402
Query: 215 KV---FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++ D KPNL Y +I+GFCKKG+LEEA + EM+ +G N + YNA+I L
Sbjct: 403 ELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISAL 462
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +G++ EA + +M G K ++ T S++ GLC V + + A+ R+++ + +
Sbjct: 463 CKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANS 522
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
++ +I+ F + G+ EA+ L+ +M RG ++N + + L + G +++ + L ++
Sbjct: 523 VTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEE 582
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + P+ ++ N +I G C A G++ + + + MI G + D Y+ L+ G C+ G
Sbjct: 583 MIRKGLTPSIITCNILINGFCTA-GKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRG 641
Query: 452 NVENVMQIAHEM 463
++ + + ++
Sbjct: 642 RIQEALNLFEKL 653
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 176/339 (51%), Gaps = 4/339 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A R V A+ + + + ++N+++ R+N + + +++ +
Sbjct: 251 LIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKG 310
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
P D+ TY ++ G CK I+ A+ + + PN++ +NT++NGF + G L EA
Sbjct: 311 FTPNDM-TYGYLMHGLCKTCRIDEAQALLSKVP-GPNVVHFNTLVNGFVRNGRLNEATAF 368
Query: 249 M-NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ ++M+N G P+ T++ ++ GLC G A L+ M G K N++T+ ++ G C
Sbjct: 369 VYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFC 428
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G+ ++A LR ++ + + Y +I+ CK GK EA+ + EM ++G KP +F
Sbjct: 429 KKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIF 488
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+FN++ L E++ A+ L + M + N V++NT+I + +G +Q+ LV+
Sbjct: 489 TFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAF-LRRGEIQEALKLVND 547
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M+ G LD Y+ L+K C+ G VE + + EM+ K
Sbjct: 548 MLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRK 586
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 145/252 (57%), Gaps = 4/252 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
YN+L+ L + I A + F ++ + PD+ T+ ++I G C++ +E+A ++
Sbjct: 454 GYNALISALCKHGKIHEALDMFGEMSSKGC-KPDIFTFNSLIFGLCRVDEMEDALALYRD 512
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ N + +NT+I+ F ++GE++EA K +N+M+ RGC +E+TYN +I LC G
Sbjct: 513 MVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGA 572
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L +M G ++ T ++ G C GK A+ ++R+++ +PD+ +Y
Sbjct: 573 VEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNS 632
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING CK G+ EA++L ++++A G++P ++N + L G D A LL + +
Sbjct: 633 LINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENG 692
Query: 397 CLPNFVSYNTII 408
+PN V++N ++
Sbjct: 693 FVPNDVTWNILV 704
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 186/403 (46%), Gaps = 23/403 (5%)
Query: 75 FNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKL----I 130
F WA Y H+ Y + D L + + + LL + F L +
Sbjct: 91 FKWAGAQK----GYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIM 146
Query: 131 KAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
K YG G A K + C SYN +L VLV N +A F+ ++ +
Sbjct: 147 KYYGRAGLPGQATRLLLDMKGVY--CCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSK 204
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEE 244
V P D T+ +++ C + ++NA + MT PN + Y T+I+ K+ ++E
Sbjct: 205 GVSPNDY-TFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDE 263
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A K + EM GC P+ T+N +IYG C RV E L+ +M L GF N T+ ++
Sbjct: 264 ALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMH 323
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL-KEMRARGLK 363
GLC + D+A L V P+V + ++NGF + G+ +EA + + +M G
Sbjct: 324 GLCKTCRIDEAQALLSKV----PGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYV 379
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P VF+F+ + L + G A+ L+ M C PN +Y +I G C KG++++
Sbjct: 380 PDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFC-KKGQLEEAGL 438
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ M+ G +L+ Y+ L+ C+ G + + + EM +K
Sbjct: 439 ILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSK 481
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 148/288 (51%), Gaps = 5/288 (1%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK-VFDVMT---VKPNLLAYNTMINGFCK 238
Q + V P+V + T++ G+ + G + A V+D M P++ ++T++NG CK
Sbjct: 335 QALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCK 394
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
KG A + +N+M +GC+PN TY +I G C G+++EA +++ +M GF N
Sbjct: 395 KGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVG 454
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ LC GK +A+ + PD+ ++ +I G C++ + ++A++L ++M
Sbjct: 455 YNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMV 514
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
G+ +FN + + GE+ A+ L+ M C + ++YN +I LC G +
Sbjct: 515 LEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALC-KTGAV 573
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ L + MIR G + L+ G+C G V N ++ +M+ +
Sbjct: 574 EKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHR 621
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 188/392 (47%), Gaps = 21/392 (5%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLK------NSNKLSDFFISKLIKAYGDRGNVKAAIF 144
TT YTA+ D LL + A ++L+ NS L + + +I G V+ A
Sbjct: 76 TTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTV--VIDGLSKAGRVEEARR 133
Query: 145 WFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN---VVPPDVSTYT 198
F + NG C + Y +L+ L + + A + + PDV TYT
Sbjct: 134 IF--VDMLGNG-CRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYT 190
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
++I G CK G I A++VFD V+ P+ + Y ++I+G CK G +EE + +EM N
Sbjct: 191 SLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRN 250
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
RG P+ +TY A+I G + +A + +M +G + T+ +L GLC G+ +
Sbjct: 251 RGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAE 310
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A + E V +Y +++GFC G A+ L + M RG +P + S+N + R
Sbjct: 311 AYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIR 370
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L G+L +A +++ Q P+ ++N + GLC + D +L + M+ G +
Sbjct: 371 GLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTS 430
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ YS L+ G C G +E ++I EMV++
Sbjct: 431 PNLHSYSILMDGICRAGGLEVALEIFREMVSR 462
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 130/248 (52%), Gaps = 4/248 (1%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M P+++A+ +ING C++ L+EA + + GC P+ +TYN I GLC RVD+
Sbjct: 1 MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L+ KM T+ +++ GL G+ D+A+ L ++E +P +K+Y VVI+
Sbjct: 61 AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM----PQM 395
G K G+ +EA + +M G +P F + A+ + L ++G+ + A L K+
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+P+ V+Y ++I GLC A ++ + D + G D Y+ ++ G C+ G VE
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240
Query: 456 VMQIAHEM 463
+ HEM
Sbjct: 241 GCERFHEM 248
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 44/318 (13%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
PD TY I G CK +++A ++ M K P + Y +++G K G L+EA
Sbjct: 40 PDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAV 99
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +M+ +G P TY +I GL GRV+EA+ + M NG + + + +++KGLC
Sbjct: 100 LEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCK 159
Query: 309 VGKFDQAVGYLR----------------------------------------NVMEANMN 328
GK ++A + +E
Sbjct: 160 SGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFI 219
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PD +Y +I+G CK+G+ +E EMR RG +P ++ A+ ++ + +A +
Sbjct: 220 PDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRV 279
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+QM Q + + V+YN I+ GLC A GR+ + M G YS L+ G+C
Sbjct: 280 YRQMLQSGTVVSTVTYNIILDGLCKA-GRVAEAYATFLAMEERGCVATVVTYSALMDGFC 338
Query: 449 EEGNVENVMQIAHEMVTK 466
EGNV +++ M+ +
Sbjct: 339 SEGNVSAAVELFRRMLDR 356
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 168/363 (46%), Gaps = 26/363 (7%)
Query: 77 WASNPNPNPNKYHHTTPCYTAITDVLLSHSLIS---IAASLLKNSNKLSDFFISK----- 128
+A N K+H T A+ DV+ SLI A +L+ D + +
Sbjct: 167 YALYKEANARKHHAT-----AVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPD 221
Query: 129 ------LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
+I G V+ FH+ + +Y +L+ ++ I A +
Sbjct: 222 AVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYR 281
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
Q+++ V V TY ++ G CK G + A F M + ++ Y+ +++GFC +
Sbjct: 282 QMLQSGTVVSTV-TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSE 340
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G + A + M++RGC PN ++YN +I GLC G++ +A K+ +V T
Sbjct: 341 GNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTF 400
Query: 300 KSMLKGLCV-VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ L GLC + V +++ +P++ SY ++++G C+ G + A+ + +EM
Sbjct: 401 NAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMV 460
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+RG+ P V FN + R L G +D A+ + +++ + P+ SY +++ GL + RM
Sbjct: 461 SRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDGLSRCE-RM 518
Query: 419 QDV 421
++
Sbjct: 519 EEA 521
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 139/281 (49%), Gaps = 9/281 (3%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PD+ +T +I G C+ ++ A V + +P+ + YN I+G CK +++A +
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +M + C P +TY A++ GL GR+DEA ++ +M G + T+ ++ GL
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK----P 364
G+ ++A +++ PD Y +I G CK GK +EA +L KE AR P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184
Query: 365 TVFSFNAVFRILVENGELDRAILLL-KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
V ++ ++ L + G + A + + + +P+ V+Y +II GLC GR+++ +
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKL-GRVEEGCE 243
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M G+ D Y+ L+ G+ + + ++ +M+
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQML 284
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 8/204 (3%)
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GLC + D+A L + A PD +Y V I+G CK + D+A LLK+M +
Sbjct: 13 VINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK 72
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
PT ++ A+ L++ G LD A+ +L+QM + P +Y +I GL A GR+++
Sbjct: 73 CLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA-GRVEEA 131
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVV 481
+ M+ +G D +Y+ L+KG C+ G E + E + K+ T V
Sbjct: 132 RRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANAR-------KHHATAVP 184
Query: 482 DALLLMWIVTGGSWISRFVFVHQV 505
D + ++ G R + QV
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQV 208
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 134/294 (45%), Gaps = 10/294 (3%)
Query: 88 YHHTTPCYTAITDVLLSHSLISIA----ASLLKNSNKLSDFFISKLIKAYGDRGNVKAAI 143
Y Y A+ D + +I A +L++ +S + ++ G V A
Sbjct: 253 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 312
Query: 144 FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
F ++ A + +Y++L+ ++ A E F +++ P++ +Y +IRG
Sbjct: 313 ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC-EPNLVSYNIIIRG 371
Query: 204 YCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK-GELEEAKKCMNEMMNRGCRP 259
C+ G + A F+ + + P++ +N ++G C++ + + + M+++G P
Sbjct: 372 LCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSP 431
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N +Y+ ++ G+C G ++ A + +M G +V ++++ LC+ G+ D+A+
Sbjct: 432 NLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVF 491
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
R +E PD SY +++G + + +EA L M+ +G P + F
Sbjct: 492 RE-LERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPRHYDLTVRF 544
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
M C P+ V++ +I GLC K R+ + +++R +R+G D+ Y+ + G C+ V+
Sbjct: 1 MPCSPDMVAFTVVINGLCREK-RLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVD 59
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRVVDALL 485
+ Q+ +M KK L T +VD LL
Sbjct: 60 DAFQLLKKMDEKK--CLPTTVTYTALVDGLL 88
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 155/279 (55%), Gaps = 5/279 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+ YN +L L + ++ A F ++VK+ + P+V TY T+I G CK IE A ++F
Sbjct: 45 FIYNFVLSGLCQEEKVEEARLLFEKMVKQR-INPNVVTYNTLINGLCKAWRIETAYELFK 103
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P ++YNT+I+GFCKK +L AK ++M+ C PN +TY +I GL +G
Sbjct: 104 EMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSG 163
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+V A ++ M G NV+T+ ++ G C V + D+A L ++ + P V +Y
Sbjct: 164 KVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN 223
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++N C+ K ++A L + M R PTV ++N + R L + +LD A L +M
Sbjct: 224 ILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 283
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
C P+ ++Y+T+ GL A G++ + ++L+++M + N
Sbjct: 284 GCPPDAITYDTLAWGLTRA-GKVHEAQELMEKMKLTKRN 321
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 142/277 (51%), Gaps = 4/277 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+ PD Y ++ G C+ +E A+ +F+ M + PN++ YNT+ING CK +E A
Sbjct: 40 IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAY 99
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ EM +G P E++YN +I G C + AK + KM + NV T+ +++ GL
Sbjct: 100 ELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGL 159
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
GK A L +++ + P+V +Y +I+GFCK+ + DEA LL++M +G+ PTV
Sbjct: 160 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTV 219
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++N + L +L+ A L + M Q C P V+YNT++ LC K ++ L
Sbjct: 220 VTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHK-QLDGAHRLYA 278
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
MI G D Y L G G V ++ +M
Sbjct: 279 EMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 116/214 (54%), Gaps = 1/214 (0%)
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
M R P+ LTY ++ LC R+D+A + +M G K + + +L GLC K
Sbjct: 1 MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKV 60
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
++A +++ +NP+V +Y +ING CK + + A L KEM +G PT S+N +
Sbjct: 61 EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ +L A + +M + +C+PN V+Y T+I GL + G++Q +++D M++ G
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKS-GKVQAAAEVLDGMVKKG 179
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ YSCL+ G+C+ V+ ++ +MVT+
Sbjct: 180 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQ 213
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 191/414 (46%), Gaps = 48/414 (11%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNK----LSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y A+ + L + A L KN + L+D S LI ++ RG + A +F +
Sbjct: 361 YNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYF--GR 418
Query: 151 QIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
IE+G +Y YNSL+ + + AE + +++ E + P +T+TT+I GYCK
Sbjct: 419 MIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG-LEPTATTFTTLISGYCKDL 477
Query: 209 MIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+E A K++ M K P++ + +I G C E+ EA K +EM+ R +P E+TYN
Sbjct: 478 QVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYN 537
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
MI G C +D+A L+ M NG + T++ ++ GLC G+ A ++ ++ +
Sbjct: 538 VMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK 597
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAIS--------------------------------- 352
N+ + Y +++G+C G+ EA+S
Sbjct: 598 NLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRL 657
Query: 353 --LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
LLK+M +GL+P + ++ + G ++ L M C PN V+Y + G
Sbjct: 658 FGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNG 717
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
LC G + L ++M+ + + + Y C L +EGN++ + HEM+
Sbjct: 718 LCKV-GEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML 770
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 160/380 (42%), Gaps = 75/380 (19%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM------------ 207
+YN L+ L + + A E + ++E + DV TY T++ G+C++
Sbjct: 255 TYNVLIHGLCKGGGVLEALEV-RKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNE 313
Query: 208 --------------GMIENAKKVFDV-----MTVK-------PNLLAYNTMING------ 235
G+++ +K ++ + VK PNL YN +IN
Sbjct: 314 MVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGED 373
Query: 236 -----------------------------FCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
FCK+G L+ A+ M+ G R YN+
Sbjct: 374 LDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNS 433
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I G C G + A+ L KM G + +T +++ G C + ++A R + E
Sbjct: 434 LINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKE 493
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P V ++ +I G C + EA L EM R +KPT ++N + + +D+A
Sbjct: 494 IAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAF 553
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
LL+ M +P+ +Y +I GLC + GR+ +D +D + + L+ YS LL G
Sbjct: 554 ELLEDMLHNGLVPDTYTYRPLISGLC-STGRVSAAKDFIDDLHKKNLKLNEMCYSALLHG 612
Query: 447 YCEEGNVENVMQIAHEMVTK 466
YC +G + + + EM+ +
Sbjct: 613 YCGQGRLTEALSASCEMIQR 632
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 126/282 (44%), Gaps = 31/282 (10%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
PD YT+MI Y K G + + + D+M + PN++ Y +NG CK GE++ A
Sbjct: 671 PDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHL 730
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+M+ PN +TY + L G + EA L +M L G N +T+ +++G C
Sbjct: 731 FEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM-LKGLLANTATYNILIRGFCK 789
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+G+ +A L + E + PD +Y +I C+ G A+ L M +G++P +
Sbjct: 790 LGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVA 849
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
FN + NG LD+A L M +++G L R
Sbjct: 850 FNLLIYGCCVNGALDKAFELRNDM--------------------LSRG-------LKPRQ 882
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
I D + + L+ G C G V+ +++ H M+T+ +L
Sbjct: 883 ILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKL 924
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 183/407 (44%), Gaps = 39/407 (9%)
Query: 71 ALFFFNWAS-NPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKL 129
AL FFN+ + N N HTT + + L+ + L A SLL + L
Sbjct: 79 ALRFFNFLGLHKNMN-----HTTTSFAILVHALVQNKLFWPANSLLH----------TLL 123
Query: 130 IKAYGDRGNVKAAIF--WFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK- 186
+ RG+ +F + KQ + ++S LG V+S F +V
Sbjct: 124 L-----RGSDPKFVFEKFLESHKQCK-------FSSTLGFDFLVHSYLQNTRVFDAVVVL 171
Query: 187 ----ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
N + P+V T + ++ G ++ +VFD VKP+ + +I C+
Sbjct: 172 RLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCEL 231
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+ AK+ + M + + +TYN +I+GLC G V EA + +R G K++V T+
Sbjct: 232 KDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTY 291
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C V +FD + + ++E P + +++G K G D A L+ ++
Sbjct: 292 CTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGR 351
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G P +F +NA+ L + +LD+A LL K M M+ N V+Y+ +I C +G +
Sbjct: 352 FGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFC-KRGMLD 410
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
E RMI G Y+ L+ G+C+ G++ + +M+ +
Sbjct: 411 VAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINE 457
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 145/318 (45%), Gaps = 39/318 (12%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENA---KKVFDVMTVKPNLLAYNTMINGFCKKGE 241
++ N + TY +I G CK G + A +K +K +++ Y T++ GFC+ +
Sbjct: 244 MESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQ 303
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++ MNEM+ G P E + ++ GL G +D A L+ K+ GF N+ + +
Sbjct: 304 FDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNA 363
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ LC D+A +N+ N+ + +Y ++I+ FCK G D A S M G
Sbjct: 364 LINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDG 423
Query: 362 LKPTVFSFNAV-------------------------------FRILV----ENGELDRAI 386
++ T++ +N++ F L+ ++ ++++A
Sbjct: 424 IRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAF 483
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L ++M + + P+ ++ +I GLC + M + L D M+ Y+ +++G
Sbjct: 484 KLYREMNEKEIAPSVYTFTALIYGLC-STNEMAEASKLFDEMVERKIKPTEVTYNVMIEG 542
Query: 447 YCEEGNVENVMQIAHEMV 464
YC+ N++ ++ +M+
Sbjct: 543 YCKAHNMDKAFELLEDML 560
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y S++ + S K + E +V E P +V TYT + G CK+G I+ A +F+ M
Sbjct: 676 YTSMIDAYSKEGSFKKSGECLDLMVTEKCFP-NVVTYTAFMNGLCKVGEIDRAGHLFEKM 734
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN + Y ++ K+G ++EA +EM+ +G N TYN +I G C GR+
Sbjct: 735 LTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRL 793
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA ++++M NG + T+ +++ C G AV ++ + PD ++ ++
Sbjct: 794 IEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLL 853
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKP 364
I G C G D+A L +M +RGLKP
Sbjct: 854 IYGCCVNGALDKAFELRNDMLSRGLKP 880
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 13/227 (5%)
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
L ++ +++ N RV +A +++ M N V T ++L GL + KF
Sbjct: 149 LGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDE 208
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ A + PD + VI C++ A + M + ++ ++N + L + G
Sbjct: 209 SVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGG 268
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFT 438
+ A+ + K + + + V+Y T++ G C R+Q +D L++ M+ G
Sbjct: 269 VLEALEVRKSLREKGLKEDVVTYCTLVLGFC----RVQQFDDGICLMNEMVELGFVPTEA 324
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALL 485
S L+ G ++GN+++ A+++V K GR L N V +AL+
Sbjct: 325 AVSGLVDGLRKKGNIDS----AYDLVVKLGRFGFLPNLF--VYNALI 365
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 165/312 (52%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L + N L+ + I A F I+K PD T T+I+G C G I+ A
Sbjct: 128 LCTLNILINCFCHLAHITFAFSVFANILKRGY-HPDAITLNTLIKGLCFCGEIKRALYFH 186
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D + + + ++Y T+ING CK GE + + + ++ +P+ + Y +I+ LC N
Sbjct: 187 DKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKN 246
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
RV +A L ++M + G NV T+ +++ G C++G +A L + N+NPDV ++
Sbjct: 247 KRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTF 306
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I+ K GK DEAISL +EM+ + + P + ++ ++ L +N L+RAI L K+M +
Sbjct: 307 NILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE 366
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ SY ++ LC GR+++ + ++ G++L+ Y+ ++ G C+ G
Sbjct: 367 QGIQPDVYSYTILLDALCKG-GRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFG 425
Query: 455 NVMQIAHEMVTK 466
+VM + +M K
Sbjct: 426 DVMDLKSKMEGK 437
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 166/344 (48%), Gaps = 12/344 (3%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE 153
C+ + + + S+ A++LK ++ LIK G +K A+ +FH K +
Sbjct: 137 CFCHLAHITFA---FSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRAL-YFHD-KVVA 191
Query: 154 NGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
G L SY +L+ L + K ++ + + V PDV YTT+I CK +
Sbjct: 192 QGFQLDQVSYGTLINGLCKAGETKAVARLLRKL-EGHSVKPDVVMYTTIIHCLCKNKRVG 250
Query: 212 NAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
+A ++ M VK PN+ YNT+I GFC G L+EA +NEM + P+ T+N +I
Sbjct: 251 DACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILI 310
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
L G++DEA L +M+ N+ T+ S++ GLC ++A+ + + E +
Sbjct: 311 DALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 370
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PDV SY ++++ CK G+ + A + + +G V ++N + L + G + L
Sbjct: 371 PDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 430
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+M C+P+ +++ TIIC L K E + MI G
Sbjct: 431 KSKMEGKGCMPDAITFKTIICAL-FEKDENDKAEKFLREMIARG 473
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN+L+ + ++K A +++ +N+ PDV T+ +I K G I+ A +F
Sbjct: 268 VFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNI-NPDVYTFNILIDALGKEGKIDEAISLF 326
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K PN++ Y ++I+G CK LE A +M +G +P+ +Y ++ LC
Sbjct: 327 EEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKG 386
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPDVKS 333
GR++ AK + + G+ NV T+ M+ GLC G F + L++ ME PD +
Sbjct: 387 GRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMD-LKSKMEGKGCMPDAIT 445
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGL 362
++ +I + ++D+A L+EM ARGL
Sbjct: 446 FKTIICALFEKDENDKAEKFLREMIARGL 474
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 177/341 (51%), Gaps = 9/341 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A + G A+ F + ++ +Y+Y L+ L + + A + +++V++
Sbjct: 296 LVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKG 355
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
V P V + +I YCK GM+E+A V +M K PN+ YN +I GFC+ ++ A
Sbjct: 356 VAP-SVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRA 414
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+N+M+ P+ +TYN +I+GLC G VD A L M +GF + T + +
Sbjct: 415 MALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVC 474
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +G+ +A L ++ E ++ + +Y +I+G+CK GK + A SL K M A P
Sbjct: 475 LCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPN 534
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+FN + L + G++ A+LL++ M + D P +YN ++ + + + +++
Sbjct: 535 SITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEV-LKEYDFDRANEIL 593
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+R+I SG+ + Y+ +K YC +G +E A EMV K
Sbjct: 594 NRLISSGYQPNVVTYTAFIKAYCSQGRLEE----AEEMVIK 630
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 162/310 (52%), Gaps = 5/310 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP-PDVSTYTTMIRGYCKMGMIENAKKV 216
L + N++L ++ ++ +A FF +I++ P PD+ TYT+++ GYC+ +E A V
Sbjct: 189 LITLNTMLNSYCKLGNMAVARLFFVRILR--CEPGPDLFTYTSLVLGYCRNDDVERACGV 246
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
F VM + N ++Y +I+G C+ G+L EA + M GC P TY ++ LC +GR
Sbjct: 247 FCVMP-RRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGR 305
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
EA L +MR G + NV T+ ++ LC G+ D+A+ L ++E + P V +
Sbjct: 306 ELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNA 365
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I +CK G ++A+ +L M ++ + P V ++N + +DRA+ LL +M +
Sbjct: 366 LIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESK 425
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+YNT+I GLC G + L MIR G + D ++ + C G V
Sbjct: 426 LSPDVVTYNTLIHGLCEV-GVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEA 484
Query: 457 MQIAHEMVTK 466
QI + K
Sbjct: 485 HQILESLKEK 494
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 171/373 (45%), Gaps = 67/373 (17%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD------------------------ 193
L +++SLL +LVR +++ AE + ++K P D
Sbjct: 86 LATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQHQL 145
Query: 194 -----VSTYTTMIRGYCKMGMIENAKKVFDVM------TVKPNLLAYNTMINGFCKKGEL 242
+++Y ++ + M++ ++ M +V PNL+ NTM+N +CK G +
Sbjct: 146 AFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNM 205
Query: 243 EEAK------------------------KCMNEMMNRGC-------RPNELTYNAMIYGL 271
A+ C N+ + R C R N ++Y +I+GL
Sbjct: 206 AVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGL 265
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G++ EA A+MR +G V T+ ++ LC G+ +A+ + E P+V
Sbjct: 266 CEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNV 325
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y V+I+ CK G+ DEA+ +L EM +G+ P+V FNA+ + G ++ A+ +L
Sbjct: 326 YTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGL 385
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M PN +YN +ICG C K M L+++M+ S + D Y+ L+ G CE G
Sbjct: 386 MESKKVCPNVRTYNELICGFCRGKS-MDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVG 444
Query: 452 NVENVMQIAHEMV 464
V++ ++ M+
Sbjct: 445 VVDSASRLFRLMI 457
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 197/477 (41%), Gaps = 76/477 (15%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL- 115
++ + E AL F PN Y YT + D L + A +L
Sbjct: 295 VLVCALCESGRELEALSLFGEMRERGCEPNVY-----TYTVLIDYLCKEGRMDEALKMLN 349
Query: 116 ---KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+ S + LI +Y RG ++ A+ + + + +YN L+ R
Sbjct: 350 EMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGK 409
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT----------- 221
S+ A +++V E+ + PDV TY T+I G C++G++++A ++F +M
Sbjct: 410 SMDRAMALLNKMV-ESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTF 468
Query: 222 ---------------------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
VK N AY +I+G+CK G++E A M+
Sbjct: 469 NAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLA 528
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
C PN +T+N MI GL G+V +A +L+ M K + T+ +++ + FD+
Sbjct: 529 EECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDR 588
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A L ++ + P+V +Y I +C G+ +EA ++ +++ G+ F +N +
Sbjct: 589 ANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLIN 648
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ--------------- 419
G LD A +L++M C P++++Y+ ++ L + K + +
Sbjct: 649 AYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNIS 708
Query: 420 -DVED------------LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D D L ++M G + YS L+ G C+ G + + H M
Sbjct: 709 VDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHM 765
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 166/388 (42%), Gaps = 25/388 (6%)
Query: 95 YTAITDVLLSHSLISIAASLLKN-------SNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
YTA+ D I AASL K N ++ + +I G V+ A+
Sbjct: 503 YTALIDGYCKAGKIEHAASLFKRMLAEECLPNSIT---FNVMIDGLRKEGKVQDAMLLVE 559
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ + L++YN L+ +++ A E ++++ P+V TYT I+ YC
Sbjct: 560 DMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGY-QPNVVTYTAFIKAYCSQ 618
Query: 208 GMIENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G +E A+++ + + LL YN +IN + G L+ A + M GC P+ LTY
Sbjct: 619 GRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTY 678
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG--YLRNV 322
+ ++ L I E N +VS + + K D + +
Sbjct: 679 SILMKHLVIEKHKKEGS--------NPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKM 730
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
E P++ +Y +ING CK+G+ + A SL MR G+ P+ N++ + G
Sbjct: 731 AECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMF 790
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
A+ LL M + L + SY +ICGL + + E + ++R G+N D +
Sbjct: 791 GEAVTLLDSMMECSHLAHLESYKLLICGL-FEQMNKEKAEAVFCSLLRCGYNYDEVAWKV 849
Query: 443 LLKGYCEEGNVENVMQIAHEMVTKKGRL 470
L+ G + G V+ ++ + M RL
Sbjct: 850 LIDGLAKTGYVDQCSELLNLMEKNGCRL 877
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 10/287 (3%)
Query: 88 YHHTTPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFISKL-IKAYGDRGNVKAAI 143
Y YTA S + A + +KN L D FI L I AYG G + +A
Sbjct: 601 YQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSA- 659
Query: 144 FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
F +++ C SY + +L++ I+ ++ V +V ++S T I
Sbjct: 660 --FGVLRRMFGTGCEPSYLTY-SILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWS 716
Query: 204 YCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G+ + PNL Y+ +ING CK G L A + M G P+E+
Sbjct: 717 KIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEII 776
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
+N+++ C G EA L+ M ++ ++K ++ GL ++A +++
Sbjct: 777 HNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLL 836
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG--LKPTVFS 368
N D +++V+I+G K G D+ LL M G L P +S
Sbjct: 837 RCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYS 883
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 191/389 (49%), Gaps = 20/389 (5%)
Query: 95 YTAITDVLLSHSLISIAASL---LKNSNKLSDFFISK-LIKAYGDRGNVKAAIFWFHQAK 150
Y+AI D L S A +L ++ D F +I + G A +
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEML 311
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + + +Y++L+ V+ AEE + +++ ++P + TY +MI G+CK +
Sbjct: 312 ERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTI-TYNSMIDGFCKQNRL 370
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ +F VM K P++ +NT+I+G+C +++ + ++EM G + TYN +
Sbjct: 371 DAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTL 430
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I+G C+ G ++ A L +M +G ++ T ++L GLC GK A+ + + ++ M
Sbjct: 431 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 490
Query: 328 N-----------PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ PDV++Y ++I+G GK EA L KEM RG+ P +++++ L
Sbjct: 491 DLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGL 550
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ LD A + M P+ V++NT++ G C A GR+ D +L M R G D
Sbjct: 551 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKA-GRVDDGLELFCEMGRRGIVAD 609
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
Y L+ G+ + GN+ + I EM++
Sbjct: 610 AITYITLIHGFRKVGNINGALDIFQEMIS 638
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 178/341 (52%), Gaps = 10/341 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIK + + A+ F + ++ + ++++LL L + + A + FHQ+ + N
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPN 177
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
VV T+TT++ G C+ G + A + D M ++PN + Y T+++G CK G+ A
Sbjct: 178 VV-----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSA 232
Query: 246 KKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ +M +PN + Y+A+I GL +GR +A L +M+ G ++ T+ M+
Sbjct: 233 LNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMID 292
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C G++ +A L+ ++E +NP+V +Y +IN + K K EA L EM RG+ P
Sbjct: 293 GFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIP 352
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++N++ + LD A + M C P+ ++NT+I G C AK R+ D +L
Sbjct: 353 NTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAK-RIDDGTEL 411
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ M +G D T Y+ L+ G+C G++ + ++ +M++
Sbjct: 412 LHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMIS 452
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 181/350 (51%), Gaps = 23/350 (6%)
Query: 134 GDRGNVKAAIFWFHQAKQIENGACLYS-------------YNSLLGVLVRVNSIKLAEEF 180
G RG FH+ K +E+ L+S +N L+GV+VR+ L
Sbjct: 40 GFRGESLKLRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISL 99
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+ ++ ++ + P DV ++ +I+ +C + A F +T +P+++ ++T+++G C
Sbjct: 100 YQKMERKQI-PCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLC 158
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+ + EA ++M CRPN +T+ ++ GLC GRV EA L+ +M +G + N
Sbjct: 159 VEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQI 214
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVME-ANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ +++ G+C +G A+ LR + E +++ P+V Y +I+G K G+ +A +L E
Sbjct: 215 TYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTE 274
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M+ +G+ P +F++N + +G A LL++M + PN V+Y+ +I +
Sbjct: 275 MQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKER- 333
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + E+L D M+ G + Y+ ++ G+C++ ++ + + M TK
Sbjct: 334 KFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK 383
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 152/296 (51%), Gaps = 15/296 (5%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGE 241
++E + PD+ TY MI G+C G A+++ M + PN++ Y+ +IN + K+ +
Sbjct: 275 MQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERK 334
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
EA++ +EM+ RG PN +TYN+MI G C R+D A+ + M G +V T +
Sbjct: 335 FFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNT 394
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C + D L + E + D +Y +I+GFC +G + A+ L ++M + G
Sbjct: 395 LIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG 454
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQM--PQMD---------CLPNFVSYNTIICG 410
+ P + + N + L +NG+L A+ + K M +MD P+ +YN +I G
Sbjct: 455 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISG 514
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L + +G+ + E+L M G + YS ++ G C++ ++ Q+ M +K
Sbjct: 515 L-INEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK 569
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 143/287 (49%), Gaps = 16/287 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS++ + N + AE F+ + + PDV T+ T+I GYC I++ ++
Sbjct: 356 TYNSMIDGFCKQNRLDAAEHMFYVMATKGC-SPDVFTFNTLIDGYCGAKRIDDGTELLHE 414
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT + + YNT+I+GFC G+L A +M++ G P+ +T N ++ GLC NG+
Sbjct: 415 MTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 474
Query: 277 VDEA-----KMLMAKMRL------NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+ +A M +KM L NG + +V T+ ++ GL GKF +A + +
Sbjct: 475 LKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHR 534
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ P+ +Y +ING CK + DEA + M ++ P V +FN + + G +D
Sbjct: 535 GIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDG 594
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ L +M + + + ++Y T+I G G + D+ MI SG
Sbjct: 595 LELFCEMGRRGIVADAITYITLIHGF-RKVGNINGALDIFQEMISSG 640
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 135/283 (47%), Gaps = 15/283 (5%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI Y + H+ + A +YN+L+ V + A + Q
Sbjct: 390 FTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQ 449
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------VKPNLLAY 229
++ V P D+ T T++ G C G +++A ++F M V+P++ Y
Sbjct: 450 MISSGVCP-DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTY 508
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +I+G +G+ EA++ EM +RG PN +TY++MI GLC R+DEA + M
Sbjct: 509 NILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGS 568
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
F +V T +++ G C G+ D + + + D +Y +I+GF K+G +
Sbjct: 569 KSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNING 628
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
A+ + +EM + G+ P + ++ +L EL RA+ +L+ +
Sbjct: 629 ALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 140/294 (47%), Gaps = 15/294 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I + + + AA F+ ++++N+L+ I E H++ +
Sbjct: 360 MIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETG 419
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+V D +TY T+I G+C +G + A + M V P+++ NT+++G C G+L++A
Sbjct: 420 LVA-DTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 478
Query: 246 KKCMNEMMNR-----------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
+ M G P+ TYN +I GL G+ EA+ L +M G
Sbjct: 479 LEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVP 538
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N T+ SM+ GLC + D+A ++ + +PDV ++ +++G+CK G+ D+ + L
Sbjct: 539 NTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELF 598
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
EM RG+ ++ + + G ++ A+ + ++M P+ ++ +++
Sbjct: 599 CEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSML 652
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 11/270 (4%)
Query: 203 GYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
G+ ++ +E+A +F M P+++ +N ++ G + E + + + M R P
Sbjct: 51 GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLM-GVVVRMERPDLVISLYQKMERKQIP 109
Query: 260 NEL-TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
++ ++N +I C ++ A K+ GF+ +V T ++L GLCV + +A+
Sbjct: 110 CDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL-- 167
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
++ P+V ++ ++NG C+ G+ EA++LL M GL+P ++ + + +
Sbjct: 168 --DLFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 225
Query: 379 NGELDRAILLLKQMPQMDCL-PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
G+ A+ LL++M +M + PN V Y+ II GL GR D +L M G D
Sbjct: 226 IGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGL-WKDGRHSDAHNLYTEMQEKGIFPDL 284
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
Y+C++ G+C G ++ EM+ +K
Sbjct: 285 FTYNCMIDGFCSSGRWSEAQRLLQEMLERK 314
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 119/245 (48%), Gaps = 17/245 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI + G++ AA+ Q I +G C + + N+LL L +K A E F + K
Sbjct: 430 LIHGFCLVGDLNAALDLSQQ--MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 487
Query: 187 E----------NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
N V PDV TY +I G G A++++ M + PN + Y++MI
Sbjct: 488 SKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMI 547
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
NG CK+ L+EA + + M ++ P+ +T+N ++ G C GRVD+ L +M G
Sbjct: 548 NGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIV 607
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ T+ +++ G VG + A+ + ++ + + PD + ++ + A+++
Sbjct: 608 ADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAM 667
Query: 354 LKEMR 358
L++++
Sbjct: 668 LEDLQ 672
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 189/409 (46%), Gaps = 50/409 (12%)
Query: 105 HSLISIAASLLKNSNKL-SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNS 163
HS SI +L +S+ L +D + L A + +A F + +S N
Sbjct: 98 HSPASIVRALPASSSPLIADLLVLALASASQPLASYEA--FLLAGDAHPRHRPSAFSVNR 155
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVP-------------------------------- 191
LL LV + LAE F ++ V P
Sbjct: 156 LLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWG 215
Query: 192 --PDVSTYTTMIRGYCKMGMIENAKKVFDV---------MTVKPNLLAYNTMINGFCKKG 240
P V TY T+I GYCK G A +++ V + PN + +N ++NG+CK
Sbjct: 216 LAPSVVTYNTIIDGYCKRG---RAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDS 272
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
A + EM +G + +TY+A+++GLC G+V+E L+ +M+ G N++T
Sbjct: 273 NTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLN 332
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S+L G C G A G++ ++ + N+ P+V +Y ++++G+ ++ K +A+++ + M +
Sbjct: 333 SVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGK 392
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G++P +N + NG+ LL +M + V+YN +I LC+ KG ++
Sbjct: 393 GVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCV-KGEVRK 451
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
L+D M+ G Y+ ++ GYCE+GN+++ +I M K R
Sbjct: 452 AVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKR 500
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 150/297 (50%), Gaps = 5/297 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y N AA+ F + KQ A + +Y++L+ L ++ + ++
Sbjct: 264 LVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLG 323
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+VP +++T +++ G+CK GM+ +A+ D M VKPN++ Y +++G+ + ++++A
Sbjct: 324 LVP-NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDA 382
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
M +G RPN YN +I G NG L+ +MR+ G + ++ T+ ++
Sbjct: 383 LAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGA 442
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LCV G+ +AV L ++ + P +Y +ING+C+ G A + M +
Sbjct: 443 LCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRAN 502
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
V ++N + L G+++ LL +M + +PN V+Y+TI G+ M KG DV
Sbjct: 503 VVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGM-MEKGYTPDVR 558
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN L+ R + ++ + V D+ TY +I C G + A K+ D M
Sbjct: 401 YNCLIAGFTRNGDWRSVSGLLDEM-RMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEM 459
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
++P L YNT+ING+C+KG ++ A + M R N +TYN I LC G++
Sbjct: 460 LMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKM 519
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+E L+ +M G N T+ ++ +G+ ME PDV+ +
Sbjct: 520 EETNELLNEMLEKGLVPNGVTYDTIKEGM----------------MEKGYTPDVRGF 560
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 201/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H +I A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 ISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G L+E + N M G +P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 227/479 (47%), Gaps = 34/479 (7%)
Query: 2 ATPRRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKV 61
++P +N P+ LV+ I+ ++ SP S L L + V +
Sbjct: 35 SSPLSISSNTDPFPE---LVSKISIILS-------SPTWERSSELSHLIPKLKPHHVVNL 84
Query: 62 IYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKL 121
+ N L FF+W S + + H C+ ++ + L+ L A
Sbjct: 85 LDTHNNTESVLRFFHWVSRTH----FFKHDMSCFVSMLNRLVRDRLFVPA---------- 130
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN-GACLYSYNSLLGVLVRVNSIKLAEEF 180
D +IK+ + G VK I + + G LYS+++LL L + + L +
Sbjct: 131 -DNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDV 189
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFC 237
+ +++ + P++ T+ MI+ C G ++ A+ + + P+ Y ++I G C
Sbjct: 190 YIEMLNSGI-RPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G L+ A + + M+ GC PN +TY+A+I GLC GR++EA ++ +M G + V
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
+ + LC G+ +AV L + + P+V++Y +I+G + GK + AI + +M
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
A GL PT +++A+ L G + A+ + + M D LPN +YN II G C + G
Sbjct: 369 LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFC-SIGY 427
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
+Q + D+M+++G + + Y+ ++ Y ++G + N M++ M KG LKL +
Sbjct: 428 IQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMM---KGNGLKLDTW 483
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 201/422 (47%), Gaps = 26/422 (6%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAAS----LLKNSNKLSDFFI 126
AL F W + + PN T Y I S I A + +LK +
Sbjct: 396 ALTIFEWMLSHDSLPN-----TETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITY 450
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ +I Y +G + A+ K NG L ++Y +L+ R ++ A F+++
Sbjct: 451 NIIIHIYFKQGYMNNAMRLLEMMKG--NGLKLDTWTYANLISGFSRGGKLEHAFSLFNEM 508
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLA---YNTMINGFCKKGE 241
V E+ + P+V TY +I GY + +++A +F M N+ + YN MI+GF K
Sbjct: 509 V-EHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNR 567
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ EA+ +M+ +G PN +TY + I GLC NGR A + +M+ + N+ T+ S
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSS 627
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GLC G+ + A +++ P+V +Y ++ G C G+ EA L++ M+ +G
Sbjct: 628 LIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKG 683
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+P+ + A+ +N E++ A+ + M P Y +IC LC A R Q
Sbjct: 684 LQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFR-QKA 742
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVV 481
+ + M++ N D +++ LL G +EG + +++ H M ++ L NF TRV+
Sbjct: 743 QCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTL----NFQTRVM 798
Query: 482 DA 483
A
Sbjct: 799 LA 800
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 179/375 (47%), Gaps = 15/375 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYG-------DRGNVKAAIFWFH 147
Y+A+ + L S + A +L+ ++ D I + AY D G A+
Sbjct: 275 YSALINGLCSEGRLEEAMDMLE---EMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLG 331
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ K+ G + +Y +L+ L R ++A +H+++ + +VP V TY+ +I
Sbjct: 332 KMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAV-TYSALINQLYVE 390
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G E A +F+ M PN YN +I GFC G +++A ++M+ G PN +TY
Sbjct: 391 GRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITY 450
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I+ G ++ A L+ M+ NG K + T+ +++ G GK + A ++E
Sbjct: 451 NIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVE 510
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
++P+V +Y +ING+ + K D+A++L +M G P+ ++N + + +
Sbjct: 511 HGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISE 570
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A +M + LPN ++Y + I GLC GR + M + + + YS L+
Sbjct: 571 AENFCGKMVKQGLLPNVITYTSFIDGLC-KNGRTSLAFKIFHEMKKRDYFPNLCTYSSLI 629
Query: 445 KGYCEEGNVENVMQI 459
G C+EG E+ ++
Sbjct: 630 DGLCQEGQAEDAERL 644
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 203/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H +I+ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMIAEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+SD ++ S LI AY + G ++ AI + K+ + + ++ L+++ KL
Sbjct: 63 ISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-EYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++++A L +M NG N
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 155/279 (55%), Gaps = 5/279 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+ YN +L L + ++ A F ++VK+ + P+V TY T+I G CK IE A ++F
Sbjct: 150 FIYNFVLSGLCQEEKVEEARLLFEKMVKQR-INPNVVTYNTLINGLCKAWRIETAYELFK 208
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P ++YNT+I+GFCKK +L AK ++M+ C PN +TY +I GL +G
Sbjct: 209 EMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSG 268
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+V A ++ M G NV+T+ ++ G C V + D+A L ++ + P V +Y
Sbjct: 269 KVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN 328
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++N C+ K ++A L + M R PTV ++N + R L + +LD A L +M
Sbjct: 329 ILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 388
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
C P+ ++Y+T+ GL A G++ + ++L+++M + N
Sbjct: 389 GCPPDAITYDTLAWGLTRA-GKVHEAQELMEKMKLTKRN 426
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 146/282 (51%), Gaps = 5/282 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+ PD Y ++ G C+ +E A+ +F+ M + PN++ YNT+ING CK +E A
Sbjct: 145 IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAY 204
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ EM +G P E++YN +I G C + AK + KM + NV T+ +++ GL
Sbjct: 205 ELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGL 264
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
GK A L +++ + P+V +Y +I+GFCK+ + DEA LL++M +G+ PTV
Sbjct: 265 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTV 324
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++N + L +L+ A L + M Q C P V+YNT++ LC K ++ L
Sbjct: 325 VTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHK-QLDGAHRLYA 383
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM-VTKK 467
MI G D Y L G G V ++ +M +TK+
Sbjct: 384 EMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKR 425
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 150/319 (47%), Gaps = 41/319 (12%)
Query: 152 IENGACLYS--YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
+E G L + Y L+ L +V + A + H + + ++ Y+T+I CK+
Sbjct: 37 VEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIA-YSTIINWLCKLNR 95
Query: 210 IENAKKVFDVMT--VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+E A+++ + M P+ L Y ++ CK +++A + EM RG +P+ YN +
Sbjct: 96 VEEARELIEKMARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFV 155
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ GLC +V+EA++L KM NV T+ +++ GLC + + A + +
Sbjct: 156 LSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGY 215
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P SY +I+GFCK K + + VF
Sbjct: 216 VPTEVSYNTLIDGFCK-------------------KKDLVAAKDVF-------------- 242
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+M + +C+PN V+Y T+I GL + G++Q +++D M++ G + YSCL+ G+
Sbjct: 243 --DKMVRSNCVPNVVTYTTLIDGLSKS-GKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299
Query: 448 CEEGNVENVMQIAHEMVTK 466
C+ V+ ++ +MVT+
Sbjct: 300 CKVRRVDEAHKLLEQMVTQ 318
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 123/243 (50%), Gaps = 2/243 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
V P +NT+ +GF K G LE+ K+ M+ G Y +I LC G DEA
Sbjct: 6 VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L+ MRL FK + +++ LC + + ++A + M PD +Y ++
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEK-MARYAPPDALTYGPIVERL 124
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK + D+A++ ++EM RG+KP F +N V L + +++ A LL ++M + PN
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
V+YNT+I GLC A R++ +L M G+ Y+ L+ G+C++ ++ +
Sbjct: 185 VTYNTLINGLCKA-WRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 243
Query: 462 EMV 464
+MV
Sbjct: 244 KMV 246
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+T ++ G G+ +Q + ++EA Y ++I+ CK+G DEA LL
Sbjct: 9 GAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLL 68
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
MR + K +++ + L + ++ A L+++M + P+ ++Y I+ LC
Sbjct: 69 HTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY-APPDALTYGPIVERLCKT 127
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
K R+ D V+ M G D +Y+ +L G C+E VE + +MV ++
Sbjct: 128 K-RIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 179/344 (52%), Gaps = 9/344 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGA--CLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ L++ + + G+++AA+ + K +E G + N L+ ++ ++ A + +
Sbjct: 234 TTLMQGFIEEGSIEAALRV--KTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKE 291
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+ + PD TY T + C+ G + +A KV D+M + P++ YNT+IN K GE
Sbjct: 292 IADGF-EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 350
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L+EAK +N+M++RGC P+ T+N +I LC R++EA L ++ + G +V T
Sbjct: 351 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNI 410
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ LC VG + + + PD +Y ++I+ C +GK A+ LLKEM + G
Sbjct: 411 LINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ ++N + L + ++ A + QM + V++NT+I GLC AK R+ D
Sbjct: 471 CPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAK-RIDDA 529
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+L+++M++ G Y+ +L YC++G+++ I M
Sbjct: 530 TELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTA 573
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 162/316 (51%), Gaps = 5/316 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N L+ L +V L F ++ K + PD TY +I C MG + NA +
Sbjct: 405 VYTFNILINALCKVGDPHLGIRLFEEM-KSSGCAPDEVTYNILIDHLCSMGKLVNALDLL 463
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + + YNT+I+ CK+ +EEA++ ++M G + +T+N +I GLC
Sbjct: 464 KEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKA 523
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+D+A L+ +M G + + T+ S+L C G +A L + DV +Y
Sbjct: 524 KRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTY 583
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ING CK G++ A+ LL+ MR +G++PT ++N V + L L A+ L ++M +
Sbjct: 584 GTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTE 643
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ P+ ++Y + GLC G +++ D + M+ G +F+ + L +G G ++
Sbjct: 644 VGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG-MD 702
Query: 455 NVMQIAHEMVTKKGRL 470
+ + A E++ +K +
Sbjct: 703 DYLISAIELIIEKAKF 718
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 143/306 (46%), Gaps = 40/306 (13%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN LL VL + +KL E ++++ + PDV T T+I+ C+ + A + + M
Sbjct: 163 YNHLLNVLAEGSRMKLLESVYNEMTDRGI-QPDVVTLNTLIKALCRAHQVRTAVLMLEEM 221
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ V P+ + T++ GF ++G +E A + +MM GC P +T N +I
Sbjct: 222 SSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLI--------- 272
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
G C +G+ + A+GY++ + PD +Y
Sbjct: 273 --------------------------NGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTF 306
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++ C+ G A+ ++ M G P VF++N V L +NGELD A ++ QM C
Sbjct: 307 VHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 366
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
LP+ ++NT+I LC ++ R+++ DL + G + D ++ L+ C+ G+ +
Sbjct: 367 LPDTTTFNTLIVALC-SQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 425
Query: 458 QIAHEM 463
++ EM
Sbjct: 426 RLFEEM 431
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 170/348 (48%), Gaps = 13/348 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS-YNSLLGVLVRVNSIKLAEEFFHQIV 185
+L+ A ++ + +AA+ + A E+ A + Y ++ L + L E ++
Sbjct: 57 DRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMR 116
Query: 186 KEN------VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKK 239
+E VV V +Y + R + ++ N F V + + YN ++N +
Sbjct: 117 REGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGV---QADTAVYNHLLNVLAEG 173
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
++ + NEM +RG +P+ +T N +I LC +V A +++ +M + + +T
Sbjct: 174 SRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTF 233
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++++G G + A+ +ME +P + V+ING+CK+G+ ++A+ +++ A
Sbjct: 234 TTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIA 293
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-GRM 418
G +P ++N L +NG + A+ ++ M Q P+ +YNT+I C++K G +
Sbjct: 294 DGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVIN--CLSKNGEL 351
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + +V++M+ G D T ++ L+ C + +E + +A E+ K
Sbjct: 352 DEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVK 399
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 186/378 (49%), Gaps = 44/378 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI GN+ A F F + K +++G A L +Y+ L+ L+++ A + ++
Sbjct: 287 LIHGLCKHGNLDEA-FRFKE-KMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE 344
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ P +V Y T+I GYCKMG + +A ++ M K PN + N++I GFCK G++E
Sbjct: 345 KGFTPNEV-VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 403
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA-----KMLMAKMRLN-------- 290
+A+ + EM++RG N + +I+ LC+N R + A +ML+ MR N
Sbjct: 404 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 463
Query: 291 ----------------------GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
GF N+ T +++ GLC G +AV L+ ++E
Sbjct: 464 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 523
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
D +Y +I+G CK GK +E L EM +G++P F++N + + G+LD A+ L
Sbjct: 524 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 583
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+ D +PN +Y +I G C A ++++ E L ++ L+ +Y+ L++ YC
Sbjct: 584 WNECKSRDLVPNVYTYGVMIDGYCKAD-KIEEGEKLFTELLTQNLELNSVVYNTLIRAYC 642
Query: 449 EEGNVENVMQIAHEMVTK 466
GN ++ +M +K
Sbjct: 643 RNGNTVEAFKLHDDMRSK 660
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 180/342 (52%), Gaps = 5/342 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ S I A+ G V+ AI F +++ + +YN+L+ L + ++ A F +
Sbjct: 247 YLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEK 306
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+VK+ V + TY+ +I G K+ A V K PN + YNT+I+G+CK G
Sbjct: 307 MVKDGV-NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMG 365
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
L +A + +M+++G PN +T N++I G C G++++A+ ++ +M GF N
Sbjct: 366 NLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFT 425
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ LC+ +F+ A+ +LR ++ NM P+ ++ G CK GK +A+ L + +
Sbjct: 426 TIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 485
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G + + NA+ L + G + A+ LLK+M + + + ++YNT+I G C +G++++
Sbjct: 486 GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCC-KEGKVEE 544
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
L M++ G D Y+ L+ G C G ++ + + +E
Sbjct: 545 GFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE 586
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +++ L + + A F +++ N+ P D TT++ G CK G +A +++
Sbjct: 423 AFTTIIHWLCMNSRFESALRFLREMLLRNMRPND-GLLTTLVGGLCKEGKHSDAVELWFR 481
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ K NL+ N +I+G CK G ++EA + + +M+ RG +++TYN +I G C G+
Sbjct: 482 LLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 541
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+E L +M G + + T+ ++ G+C +GK D+AV ++ P+V +Y V
Sbjct: 542 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 601
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+CK K +E L E+ + L+ +N + R NG A L M
Sbjct: 602 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 661
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P +Y+++I G+C GRM+D + L+D M + G + Y+ L+ GYC+ G ++ V
Sbjct: 662 IPPTTATYSSLIHGMCNI-GRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKV 720
Query: 457 MQIAHEM 463
+ + EM
Sbjct: 721 VNVLQEM 727
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 171/332 (51%), Gaps = 9/332 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI GN++ A+ K +E G L +YN+L+ + ++ + ++VK
Sbjct: 497 LIHGLCKTGNMQEAVRLLK--KMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 554
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ + PD TY +I G C++G ++ A +++ + PN+ Y MI+G+CK ++E
Sbjct: 555 QGI-EPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIE 613
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
E +K E++ + N + YN +I C NG EA L MR G +T+ S++
Sbjct: 614 EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLI 673
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G+C +G+ + A + + + + P+V Y +I G+CK+G+ D+ +++L+EM + +
Sbjct: 674 HGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH 733
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P ++ + ++G++ A LL +M +P+ V+YN + G C +G++++
Sbjct: 734 PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC-KEGKIEEGFK 792
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ D M + G LD Y+ L+ G+ + + N
Sbjct: 793 ICDYMSQEGLPLDEITYTTLVHGWQQPSALTN 824
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 175/354 (49%), Gaps = 8/354 (2%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVN 172
LL+N + +D ++ L+ G A+ WF ++ GA L + N+L+ L +
Sbjct: 448 LLRNM-RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK-GFGANLVTTNALIHGLCKTG 505
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAY 229
+++ A ++++ V D TY T+I G CK G +E K+ M ++P+ Y
Sbjct: 506 NMQEAVRLLKKMLERGFVL-DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTY 564
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +I+G C+ G+L+EA NE +R PN TY MI G C +++E + L ++
Sbjct: 565 NLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLT 624
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+ N + ++++ C G +A ++ + P +Y +I+G C IG+ ++
Sbjct: 625 QNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMED 684
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A L+ EMR GL P V + A+ + G++D+ + +L++M D PN ++Y +I
Sbjct: 685 AKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMID 744
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + G M+ L+ M+ G D Y+ L G+C+EG +E +I M
Sbjct: 745 GYSKS-GDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYM 797
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 161/306 (52%), Gaps = 6/306 (1%)
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVM 220
LL LV+ N ++ + F + + V PDV ++T I +CK G +E+A ++F + +
Sbjct: 218 LLSSLVKANELEKSYWVFETMRQG--VSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKL 275
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
V PN++ YN +I+G CK G L+EA + +M+ G +TY+ +I GL + +EA
Sbjct: 276 GVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEA 335
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
++ + GF N + +++ G C +G A+ +++ +NP+ + +I G
Sbjct: 336 NSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQG 395
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
FCKIG+ ++A +L+EM +RG +F + L N + A+ L++M + PN
Sbjct: 396 FCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPN 455
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
T++ GLC +G+ D +L R++ G + + L+ G C+ GN++ +++
Sbjct: 456 DGLLTTLVGGLC-KEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLL 514
Query: 461 HEMVTK 466
+M+ +
Sbjct: 515 KKMLER 520
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV 222
+L+G L + A E + +++ E ++ T +I G CK G ++ A ++ M
Sbjct: 461 TLVGGLCKEGKHSDAVELWFRLL-EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE 519
Query: 223 KPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+ +L YNT+I+G CK+G++EE K EM+ +G P+ TYN +I+G+C G++DE
Sbjct: 520 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 579
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L + + NV T+ M+ G C K ++ ++ N+ + Y +I
Sbjct: 580 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIR 639
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
+C+ G + EA L +MR++G+ PT +++++ + G ++ A L+ +M + LP
Sbjct: 640 AYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 699
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
N V Y +I G C G+M V +++ M + + Y+ ++ GY + G+++ ++
Sbjct: 700 NVVCYTALIGGYCKL-GQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKL 758
Query: 460 AHEMVTK 466
HEMV K
Sbjct: 759 LHEMVGK 765
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 222/476 (46%), Gaps = 35/476 (7%)
Query: 4 PRRSLTNISQIPDQS-ILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVI 62
P L + +Q P L+ S+TS++ NPS + S Q L + V
Sbjct: 32 PPSPLPSQNQPPSSDHALLKSVTSILS-----NPS---LDSTQCKQLIPHLSPHQFDSVF 83
Query: 63 Y---EQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSN 119
+ NP AL FF +AS+ + T Y + L+ +S A LL
Sbjct: 84 FSVRRNVNPKTALNFFYFASDSC----GFRFTLRSYCVLMRSLIVSGFVSPARLLLI--- 136
Query: 120 KLSDFFISKLIKAYGDRGN----VKAAIFWFHQAKQIENGACLYSYNSLLGVL---VRVN 172
+L D KL +GD N + +A+ ++ E+G + + + L+ V R
Sbjct: 137 RLID---RKLPVLFGDPKNRHIEIASAMADLNEVG--ESGVAVAAVDLLIHVYCTQFRNV 191
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--VKPNLLAYN 230
+ A F + + V P V T T ++ K +E + VF+ M V P++ ++
Sbjct: 192 GFRNAIGVFRFLANKGVFP-TVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFS 250
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
T IN FCK G++E+A + +M G PN +TYN +I+GLC +G +DEA KM +
Sbjct: 251 TAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD 310
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G + T+ ++ GL + KF++A L+ +E P+ Y +I+G+CK+G +A
Sbjct: 311 GVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDA 370
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+ + +M ++G+ P + N++ + + G++++A +L++M N ++ TII
Sbjct: 371 LRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHW 430
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LCM R + + M+ + + + L+ G C+EG + +++ ++ K
Sbjct: 431 LCM-NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 485
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 169/333 (50%), Gaps = 10/333 (3%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V A+ FHQ + + + ++ +L+ L R + A ++V EN + PD TY
Sbjct: 167 VSEALDLFHQICRPD----VLTFTTLMNGLCREGRVVEAVALLDRMV-ENGLQPDQITYG 221
Query: 199 TMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T + G CKMG +A +K+ ++ +KPN++ Y+ +I+G CK G ++ EM +
Sbjct: 222 TFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQD 281
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G PN +TYN MI G CI+GR A+ L+ +M NV T+ +++ GKF +
Sbjct: 282 KGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFE 341
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A ++ + P+ +Y +I+GFCK + D A + M +G P VF+F +
Sbjct: 342 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+D + LL +MP+ + N V+YNT+I G C+ G + DL +MI SG
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV-GDLNAALDLSQQMISSGVC 460
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D + LL G C+ G +++ +++ M K
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 167/320 (52%), Gaps = 16/320 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ V+ A E + +++ ++P + TY +MI G+CK ++ A+ +F +
Sbjct: 325 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI-TYNSMIDGFCKQDRLDAAEDMFYL 383
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P++ + T+I+G+C +++ + ++EM RG N +TYN +I+G C+ G
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN-------- 328
++ A L +M +G ++ T ++L GLC GK A+ + + ++ M+
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503
Query: 329 ---PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
PDV +Y ++I G GK EA L +EM RG+ P +++++ L + LD A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ M PN V++NT+I G C A GR+ D +L M R G D +Y L+
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKA-GRVDDGLELFCEMGRRGIVADAIIYITLIY 622
Query: 446 GYCEEGNVENVMQIAHEMVT 465
G+ + GN+ + I EM++
Sbjct: 623 GFRKVGNINGALDIFQEMIS 642
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 172/330 (52%), Gaps = 6/330 (1%)
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
+R ++ +++ + KQI +YS+ L+ + + A F ++ K + PDV
Sbjct: 95 ERPDLVISLYQKMERKQIRCD--IYSFTILIKCFCSCSKLPFALSTFGKLTKLGL-HPDV 151
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T+TT++ G C + A +F + +P++L + T++NG C++G + EA ++ M+
Sbjct: 152 VTFTTLLHGLCLDHRVSEALDLFHQI-CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVE 210
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFD 313
G +P+++TY + G+C G A L+ KM ++ K NV + +++ GLC G+
Sbjct: 211 NGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHS 270
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ + + + P++ +Y +I GFC G+ A LL+EM R + P V ++NA+
Sbjct: 271 DSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALI 330
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
V+ G+ A L +M +PN ++YN++I G C + R+ ED+ M G
Sbjct: 331 NAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC-KQDRLDAAEDMFYLMATKGC 389
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ D ++ L+ GYC +++ M++ HEM
Sbjct: 390 SPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 155/296 (52%), Gaps = 15/296 (5%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGE 241
+++ + P++ TY MI G+C G A+++ M + PN++ YN +IN F K+G+
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
EA + +EM+ RG PN +TYN+MI G C R+D A+ + M G +V T +
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C + D + L + + + +Y +I+GFC +G + A+ L ++M + G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQM--PQMD---------CLPNFVSYNTIICG 410
+ P + + N + L +NG+L A+ + K M +MD P+ ++YN +ICG
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L + +G+ + E+L + M G D YS ++ G C++ ++ Q+ M +K
Sbjct: 519 L-INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 573
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 133/285 (46%), Gaps = 15/285 (5%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI Y + + H+ + A +YN+L+ V + A + Q
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------VKPNLLAY 229
++ V P D+ T T++ G C G +++A ++F M V+P++L Y
Sbjct: 454 MISSGVCP-DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +I G +G+ EA++ EM +RG P+ +TY++MI GLC R+DEA + M
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
F NV T +++ G C G+ D + + + D Y +I GF K+G +
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
A+ + +EM + G+ P + + EL+RA+ +L+ + +
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 127/246 (51%), Gaps = 6/246 (2%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ ++ ++ +I FC +L A ++ G P+ +T+ +++GLC++ RV EA
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L ++ + +V T +++ GLC G+ +AV L ++E + PD +Y ++G
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227
Query: 342 CKIGKSDEAISLLKEMRA-RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CK+G + A++LL++M +KP V ++A+ L ++G + L +M PN
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+YN +I G C++ GR + L+ M+ + + Y+ L+ + +EG ++
Sbjct: 288 IVTYNCMIGGFCIS-GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346
Query: 461 HEMVTK 466
EM+ +
Sbjct: 347 DEMLPR 352
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 122/262 (46%), Gaps = 9/262 (3%)
Query: 210 IENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+E+A +F M P+++ +N ++ + + +M + R + ++
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I C ++ A K+ G +V T ++L GLC+ + +A+ +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
PDV ++ ++NG C+ G+ EA++LL M GL+P ++ + + G+ A+
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 387 LLLKQMPQMDCL-PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
LL++M ++ + PN V Y+ II GLC GR D +L M G + Y+C++
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLC-KDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296
Query: 446 GYCEEGNVENVMQIAHEMVTKK 467
G+C G ++ EM+ +K
Sbjct: 297 GFCISGRWSAAQRLLQEMLERK 318
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 169/333 (50%), Gaps = 10/333 (3%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V A+ FHQ + + + ++ +L+ L R + A ++V EN + PD TY
Sbjct: 167 VSEALDLFHQICRPD----VLTFTTLMNGLCREGRVVEAVALLDRMV-ENGLQPDQITYG 221
Query: 199 TMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T + G CKMG +A +K+ ++ +KPN++ Y+ +I+G CK G ++ EM +
Sbjct: 222 TFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQD 281
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G PN +TYN MI G CI+GR A+ L+ +M NV T+ +++ GKF +
Sbjct: 282 KGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFE 341
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A ++ + P+ +Y +I+GFCK + D A + M +G P VF+F +
Sbjct: 342 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+D + LL +MP+ + N V+YNT+I G C+ G + DL +MI SG
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV-GDLNAALDLSQQMISSGVC 460
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D + LL G C+ G +++ +++ M K
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 167/320 (52%), Gaps = 16/320 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ V+ A E + +++ ++P + TY +MI G+CK ++ A+ +F +
Sbjct: 325 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI-TYNSMIDGFCKQDRLDAAEDMFYL 383
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P++ + T+I+G+C +++ + ++EM RG N +TYN +I+G C+ G
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN-------- 328
++ A L +M +G ++ T ++L GLC GK A+ + + ++ M+
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503
Query: 329 ---PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
PDV +Y ++I G GK EA L +EM RG+ P +++++ L + LD A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ M PN V++NT+I G C A GR+ D +L M R G D +Y L+
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKA-GRVDDGLELFCEMGRRGIVADAIIYITLIY 622
Query: 446 GYCEEGNVENVMQIAHEMVT 465
G+ + GN+ + I EM++
Sbjct: 623 GFRKVGNINGALDIFQEMIS 642
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 172/330 (52%), Gaps = 6/330 (1%)
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
+R ++ +++ + KQI +YS+ L+ + + A F ++ K + PDV
Sbjct: 95 ERPDLVISLYQKMERKQIRCD--IYSFTILIKCFCSCSKLPFALSTFGKLTKLGL-HPDV 151
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T+TT++ G C + A +F + +P++L + T++NG C++G + EA ++ M+
Sbjct: 152 VTFTTLLHGLCLDHRVSEALDLFHQI-CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVE 210
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFD 313
G +P+++TY + G+C G A L+ KM ++ K NV + +++ GLC G+
Sbjct: 211 NGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHS 270
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ + + + P++ +Y +I GFC G+ A LL+EM R + P V ++NA+
Sbjct: 271 DSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALI 330
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
V+ G+ A L +M +PN ++YN++I G C + R+ ED+ M G
Sbjct: 331 NAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC-KQDRLDAAEDMFYLMATKGC 389
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ D ++ L+ GYC +++ M++ HEM
Sbjct: 390 SPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 155/296 (52%), Gaps = 15/296 (5%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGE 241
+++ + P++ TY MI G+C G A+++ M + PN++ YN +IN F K+G+
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
EA + +EM+ RG PN +TYN+MI G C R+D A+ + M G +V T +
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C + D + L + + + +Y +I+GFC +G + A+ L ++M + G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQM--PQMD---------CLPNFVSYNTIICG 410
+ P + + N + L +NG+L A+ + K M +MD P+ ++YN +ICG
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L + +G+ + E+L + M G D YS ++ G C++ ++ Q+ M +K
Sbjct: 519 L-INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 573
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 15/283 (5%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI Y + + H+ + A +YN+L+ V + A + Q
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------VKPNLLAY 229
++ V P D+ T T++ G C G +++A ++F M V+P++L Y
Sbjct: 454 MISSGVCP-DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +I G +G+ EA++ EM +RG P+ +TY++MI GLC R+DEA + M
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
F NV T +++ G C G+ D + + + D Y +I GF K+G +
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
A+ + +EM + G+ P + + EL+RA+ +L+ +
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 127/246 (51%), Gaps = 6/246 (2%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ ++ ++ +I FC +L A ++ G P+ +T+ +++GLC++ RV EA
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L ++ + +V T +++ GLC G+ +AV L ++E + PD +Y ++G
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227
Query: 342 CKIGKSDEAISLLKEMRA-RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CK+G + A++LL++M +KP V ++A+ L ++G + L +M PN
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+YN +I G C++ GR + L+ M+ + + Y+ L+ + +EG ++
Sbjct: 288 IVTYNCMIGGFCIS-GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346
Query: 461 HEMVTK 466
EM+ +
Sbjct: 347 DEMLPR 352
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 121/245 (49%), Gaps = 17/245 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI + G++ AA+ Q I +G C + + N+LL L +K A E F + K
Sbjct: 434 LIHGFCLVGDLNAALDLSQQ--MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491
Query: 187 E----------NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
N V PDV TY +I G G A+++++ M + P+ + Y++MI
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G CK+ L+EA + M ++ PN +T+N +I G C GRVD+ L +M G
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 611
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ + +++ G VG + A+ + ++ + + PD + ++ GF + + A+++
Sbjct: 612 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 671
Query: 354 LKEMR 358
L++++
Sbjct: 672 LEDLQ 676
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 122/262 (46%), Gaps = 9/262 (3%)
Query: 210 IENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+E+A +F M P+++ +N ++ + + +M + R + ++
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I C ++ A K+ G +V T ++L GLC+ + +A+ +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
PDV ++ ++NG C+ G+ EA++LL M GL+P ++ + + G+ A+
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 387 LLLKQMPQMDCL-PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
LL++M ++ + PN V Y+ II GLC GR D +L M G + Y+C++
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLC-KDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296
Query: 446 GYCEEGNVENVMQIAHEMVTKK 467
G+C G ++ EM+ +K
Sbjct: 297 GFCISGRWSAAQRLLQEMLERK 318
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+S++ L + + + A + F + ++ P+V T+ T+I GYCK G +++ ++F
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFVSMGSKSF-SPNVVTFNTLINGYCKAGRVDDGLELFCE 604
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + + + Y T+I GF K G + A EM++ G P+ +T M+ G
Sbjct: 605 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 664
Query: 277 VDEAKMLMAKMRLN 290
++ A ++ ++++
Sbjct: 665 LERAVAMLEDLQMS 678
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 200/401 (49%), Gaps = 25/401 (6%)
Query: 67 NPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFI 126
NP AL FFN S P P + HT ++ + +L+ ++L + + ++S
Sbjct: 98 NPNIALQFFN--SLPLIKPG-FKHTVKSHSFLLKILIPNNLFGVGEKI-----RIS---- 145
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGA----CLYSYNSLLGVLVRVNSIKLAEEFFH 182
+IKA +++ + + Q + +N + SYN LL +L R I + +
Sbjct: 146 --MIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYT 203
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCK 238
+++ + +VP ++ T TM+ Y KMG I A K+F + P+ Y ++I G+C+
Sbjct: 204 EMLNDMIVP-NIYTLNTMVNAYSKMGNIVEANLYVSKIFQA-GLSPDSFTYTSLILGYCR 261
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
++ A K N M N+GCR NE++Y +I+GLC GR+DE L KMR + V T
Sbjct: 262 NNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRT 321
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ ++ L + + + + E + P+V +Y V+++ CK K DE+ +L EM
Sbjct: 322 YTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMM 381
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+GL P+V ++NA+ R E G ++ A+ +L M +C PN +YN +ICG K +
Sbjct: 382 EKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRK-HV 440
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
L+ +M+ S Y+ L+ C+ G+ ++ ++
Sbjct: 441 HKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKL 481
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 180/342 (52%), Gaps = 5/342 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I + G + I F + ++ + + +Y ++ L + + F+++ +
Sbjct: 288 TTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEM-R 346
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E P+V TYT M+ CK ++ ++++ + M K P+++ YN +I G+C++G +E
Sbjct: 347 ERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIE 406
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + + M + CRPNE TYN +I G V +A L++KM + ++ T+ S++
Sbjct: 407 AALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLI 466
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
C G FD A L + E + PD +Y V I+ CK + +EA L ++ +G+K
Sbjct: 467 HVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIK 526
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+ A+ + G++D AI LL++M DCLPN +YN++I G+C +G++Q+
Sbjct: 527 ANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVC-KEGKVQEGLS 585
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+V+ M + G Y+ L++ EG+ ++ ++ ++MV+
Sbjct: 586 MVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVS 627
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 165/357 (46%), Gaps = 40/357 (11%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
F++ ++ +++Y ++ + + + + ++++++ +VP V TY +IRGYC
Sbjct: 342 FNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVP-SVVTYNALIRGYC 400
Query: 206 KMGMIENA-----------------------------KKVFDVMTV---------KPNLL 227
+ G IE A K V MT+ P+L+
Sbjct: 401 EEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLV 460
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YN++I+ CK G + A K ++ + G P++ TY+ I LC + R++EA L +
Sbjct: 461 TYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSL 520
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+ G K N + +++ G C GK D+A+ L + + P+ +Y +I G CK GK
Sbjct: 521 KEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKV 580
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
E +S+++ M G+KPTV ++ + ++ G+ D A + QM P+ +Y
Sbjct: 581 QEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAF 640
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
I C + G +++ E ++ RMI +G D Y+ L+ Y G + + M+
Sbjct: 641 IHTYCTS-GNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRML 696
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 4/285 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
++LI + R +V A+ + + + L +YNSL+ V + A + ++K
Sbjct: 428 NELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLL-DLLK 486
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
EN + PD TY+ I CK +E A +F+ + +K N + Y +I+G CK G+++
Sbjct: 487 ENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKID 546
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + M + C PN TYN++IYG+C G+V E ++ M G K V+T+ ++
Sbjct: 547 EAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILI 606
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+ + G FD A ++ PDV +Y I+ +C G EA ++ M G+
Sbjct: 607 EEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVM 666
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
P ++ + G A +LK+M C P+ +N +I
Sbjct: 667 PDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
+YN ++ L +DE K + +M + N+ T +M+ +G +A Y+ +
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+A ++PD +Y +I G+C+ + A + M +G + S+ + L E G +
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
D I L K+M + DC P +Y II L R + DL + M + Y+
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHAL-FGNDRNLEGMDLFNEMRERSCEPNVHTYTV 359
Query: 443 LLKGYCEEGNVENVMQIAHEMVTK 466
++ C+E ++ +I +EM+ K
Sbjct: 360 MVDAMCKERKLDESRRILNEMMEK 383
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 8/182 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNK----LSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YTA+ D I A SLL+ + + + LI G V+ +
Sbjct: 532 YTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMS 591
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
++ + +Y L+ ++R A F+Q+V PDV TYT I YC G +
Sbjct: 592 KMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGH-KPDVYTYTAFIHTYCTSGNV 650
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ + M V P+ L Y +I+ + + G +A + M++ GC P+ +N +
Sbjct: 651 KEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNL 710
Query: 268 IY 269
I+
Sbjct: 711 IW 712
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 203/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 187/374 (50%), Gaps = 9/374 (2%)
Query: 96 TAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG 155
+ ++ V + +L+S +N + D I ++A R +A + +
Sbjct: 25 SGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSIN 84
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
AC NSLLG LV+++ ++LA E ++V+ + +V T M+ CK G ++ K
Sbjct: 85 AC----NSLLGGLVKIDWVELAWEVHREVVRSGI-ELNVYTLNIMVNALCKDGKFDDVKS 139
Query: 216 VFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
M + +++ YNT+I +C++G LEEA + MN M ++G +P+ TYNA+I GLC
Sbjct: 140 FLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLC 199
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
GR AK ++ +M G + +T+ ++L C F +A ++ + PD+
Sbjct: 200 KKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLV 259
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
S+ +I F + D+A+ ++M+ GL P + + NG + A+ + +M
Sbjct: 260 SFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM 319
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ C+ + ++YNTI+ GLC K + D + L D M+ G DF ++ L+ G+C++GN
Sbjct: 320 LEQGCVLDVIAYNTILNGLCKEK-MLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGN 378
Query: 453 VENVMQIAHEMVTK 466
+ + + M +
Sbjct: 379 MTKALSLFGTMTQR 392
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 175/347 (50%), Gaps = 40/347 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L S++SL+ V R + A +F + K +VP +V YT ++ GYC+ G + A K+
Sbjct: 258 LVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNV-IYTVLMHGYCRNGNMLEALKIR 316
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M + +++AYNT++NG CK+ L +A K +EM+ RG P+ T+ +I+G C +
Sbjct: 317 DEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQD 376
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA------------------- 315
G + +A L M K ++ + +++ G C VG+ ++A
Sbjct: 377 GNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITY 436
Query: 316 ---------VGY------LRNVM-EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
VG+ L +VM E + P + + VI G+C+ G S +A L M A
Sbjct: 437 GILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIA 496
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G+ P S+N + V +D+A L + +M + LP+ ++YN ++ G C +GRMQ
Sbjct: 497 KGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFC-RQGRMQ 555
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E ++ +MI G N D + Y+ L+ G+ + N+ + EM+ +
Sbjct: 556 EAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQR 602
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 153/287 (53%), Gaps = 8/287 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L+ Y GN+ A+ + + +E G L +YN++L L + + A++ F ++V+
Sbjct: 299 LMHGYCRNGNMLEALKI--RDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE 356
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+P D T+TT+I G+C+ G + A +F MT +KP+++AYNT+I+GFCK GE+E
Sbjct: 357 RGALP-DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEME 415
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + + M++R PN +TY +I C G V EA L M G K + T +++
Sbjct: 416 KASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVI 475
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
KG C G +A +L ++ + PD SY +INGF + D+A + +M GL
Sbjct: 476 KGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLL 535
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
P + ++N V G + A L+L++M + P+ +Y +I G
Sbjct: 536 PDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALING 582
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 8/277 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKN---SNKLSDFF-ISKLIKAYGDRGNVKAAIFWFHQAK 150
Y I + L +++ A L L DF+ + LI + GN+ A+ F
Sbjct: 331 YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 390
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
Q + +YN+L+ +V ++ A E + ++ + P + TY +I YC +G +
Sbjct: 391 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHI-TYGILINAYCSVGHV 449
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A +++DVM +KP L+ NT+I G+C+ G+ +A + + M+ +G P+ ++YN +
Sbjct: 450 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 509
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G +D+A + + KM G ++ T+ ++ G C G+ +A LR ++E +
Sbjct: 510 INGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGI 569
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
NPD +Y +ING +EA EM RG P
Sbjct: 570 NPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAP 606
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 171/312 (54%), Gaps = 10/312 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y L+ L ++ A E Q++++ ++P +V TY +I GYCK GMIE+A V
Sbjct: 358 IHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMP-NVITYNALINGYCKRGMIEDALDVV 416
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
++M ++PN YN +I G+CK+ + +A +N+M+ R P+ +TYN++I G C +
Sbjct: 417 ELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A L++ M G + T+ SM+ LC + ++A ++ + ++ P+V Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMY 535
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G+CK GK +EA +L++M ++ P +FNA+ L +G+L A LL ++M +
Sbjct: 536 TALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVK 595
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+D P VS +TI+ + G +M+ SG D Y+ ++ YC EG
Sbjct: 596 IDLQPT-VSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGR-- 652
Query: 455 NVMQIAHEMVTK 466
+Q A +MV K
Sbjct: 653 --LQDAEDMVAK 662
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 185/362 (51%), Gaps = 22/362 (6%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
++LIK Y R NV A+ ++ + + + +YNSL+ R + A +
Sbjct: 432 NELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+VP D TYT+MI CK +E A +FD + K PN++ Y +I+G+CK G++
Sbjct: 491 RGLVP-DPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVN 549
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +M+++ C PN LT+NA+I+GLC +G++ EA +L KM + VST ++
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILI 609
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
L G FD A + ++ + PD +Y I +C+ G+ +A ++ +M+ G+
Sbjct: 610 HRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVS 669
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII--------------- 408
P +F+++++ + + G + A ++LK+M C P+ ++ ++I
Sbjct: 670 PDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGE 729
Query: 409 CGLCMAKGRMQ--DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G+C+ M+ V +L+++M+ G + Y L+ G CE GN+ ++ M K
Sbjct: 730 PGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQK 789
Query: 467 KG 468
+G
Sbjct: 790 EG 791
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 126/508 (24%), Positives = 232/508 (45%), Gaps = 72/508 (14%)
Query: 25 TSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPN 84
TSV RL P L + + V+ + +P AL F +W S N
Sbjct: 60 TSVPHRLFSILSKPNWHKCPSLKSMVPAISPSHVSSLFSLDLDPKTALNFSHWISQ---N 116
Query: 85 PNKYHHTTPCYTAITDVLLSHSLISIAAS----LLKNSNKLSD-FFISKL---------- 129
P +Y H+ Y ++ +L+++ + + ++K+ + ++D F+ L
Sbjct: 117 P-RYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESF 175
Query: 130 -------IKAYGDRGNVKAAIFWFHQAKQI-----ENGAC--LYSYNSLLGVLVRVNSIK 175
I Y N A + KQ+ E+ C +Y+YN ++ +V +++
Sbjct: 176 ELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVE 235
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTM 232
A ++ IV E + PD TYT++I GYC+ +++A KVF M +K N +AY +
Sbjct: 236 EANQYVSMIV-EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHL 294
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
I+G C + ++EA +M + C P TY +I LC + R EA L+ +M G
Sbjct: 295 IHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGI 354
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
K N+ T+ ++ LC K ++A L ++E + P+V +Y +ING+CK G ++A+
Sbjct: 355 KPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALD 414
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+++ M +R L+P ++N + + + + +A+ +L +M + LP+ V+YN++I G C
Sbjct: 415 VVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 413 MA----------------------------------KGRMQDVEDLVDRMIRSGHNLDFT 438
+ R+++ DL D + + +
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVV 533
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MY+ L+ GYC+ G V + +M++K
Sbjct: 534 MYTALIDGYCKAGKVNEAHLMLEKMLSK 561
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 153/277 (55%), Gaps = 5/277 (1%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
+ Y T++ + G+++ K+V+ M V PN+ YN M+NG+CK G +EEA + ++
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
++ G P+ TY ++I G C +D A + +M L G + N + ++ GLCV
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ D+A+ + + + P V++Y V+I C + EA++L+KEM +G+KP + ++
Sbjct: 303 RIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ L +L++A LL QM + +PN ++YN +I G C +G ++D D+V+ M
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYC-KRGMIEDALDVVELMES 421
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ Y+ L+KGYC+ NV M + ++M+ +K
Sbjct: 422 RNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERK 457
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 163/415 (39%), Gaps = 129/415 (31%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y S++ L + ++ A + F + +++V+P +V YT +I GYCK G + A + +
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIP-NVVMYTALIDGYCKAGKVNEAHLMLE 556
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAK----------------------------- 246
M K PN L +N +I+G C G+L+EA
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDG 616
Query: 247 ------KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ +M++ G +P+ TY I C GR+ +A+ ++AKM+ NG ++ T+
Sbjct: 617 DFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYS 676
Query: 301 SMLKG--------------------------------------------------LCVVG 310
S++KG +CV+
Sbjct: 677 SLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMS 736
Query: 311 ---KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG---------------------- 345
+FD V L ++E + P+ KSYE ++ G C+IG
Sbjct: 737 NMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSE 796
Query: 346 --------------KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
K +EA ++ +M G P + S + L + GE +R + +
Sbjct: 797 LVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQN 856
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+ Q + +++ II G+ +G ++ +L + M ++G YS L++G
Sbjct: 857 LLQCGYYDDELAWKIIIDGV-GKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 133/310 (42%), Gaps = 21/310 (6%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKL 129
HA F + P+ + +TT T + L + + A + +N F S L
Sbjct: 620 HAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAE-DMVAKMKENGVSPDLFTYSSL 678
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
IK YGD G +A F K++ + C S ++ L ++ + +K + VK
Sbjct: 679 IKGYGDLGRTNSA---FVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGK------VKGG- 728
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
P V + M+ + ++E + V PN +Y ++ G C+ G L A+K
Sbjct: 729 -EPGVCVMSNMMEFDIVVELLEKMVE----HGVTPNAKSYEKLMLGICEIGNLRVAEKVF 783
Query: 250 NEMMNR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M + G P+EL +NA++ C + +EA ++ M G + + K ++ L
Sbjct: 784 DHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYK 843
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G+ ++ +N+++ D +++++I+G K G + L M G FS
Sbjct: 844 KGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG---CTFS 900
Query: 369 FNAVFRILVE 378
+ + +L+E
Sbjct: 901 -SQTYSLLIE 909
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 190/409 (46%), Gaps = 10/409 (2%)
Query: 65 QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA----ASLLKNSNK 120
++ P A+ FN A++ P T+ Y + D +A LL+ +
Sbjct: 84 RSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLR 143
Query: 121 LSDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+ + L+K + + A+ H+ ++ ++SY+ LL L A++
Sbjct: 144 VDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203
Query: 180 FFHQIVKENVV-PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING 235
+ + V PDV Y T+I G+ K G + A +F M + P+ + Y+++++
Sbjct: 204 LLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
CK +++A+ + +M+N+G PN TYN +IYG G+ EA + +MR +
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 323
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V T ++ LC GK +A + NPDV SY +++NG+ G + L
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
M G+ P + +FN + + G LD+A+++ +M PN ++Y T+I LC
Sbjct: 384 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRI- 442
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G+M D + ++MI G D Y CL++G+C G++ ++ E++
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIM 491
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 174/375 (46%), Gaps = 38/375 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I + G+V A F + Q +Y+S++ L + ++ AE F Q+V +
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284
Query: 189 VVP----------------------------------PDVSTYTTMIRGYCKMGMIENAK 214
V+P PDV T+ ++ CK G I+ A+
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEAR 344
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
VFD M +K P++ +YN M+NG+ KG L + + M+ G P T+N +I
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 404
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
G +D+A ++ +MR +G K NV T+ +++ LC +GK D A+ +++ + PD
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I GFC G +A L+ E+ G+ + F+++ L + G + A +
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDL 524
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ P V Y+ ++ G C+ G+M+ + D M+ +G + +Y L+ GYC+ G
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLV-GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIG 583
Query: 452 NVENVMQIAHEMVTK 466
++ + + EM+ K
Sbjct: 584 RIDEGLSLFREMLQK 598
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 182/378 (48%), Gaps = 43/378 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ + A F+++ +++ V P+V TYTT+I C++G +++A + F+
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEM-RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQ 454
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+ AY+ +I GFC G L +AK+ ++E+MN G + + ++++I LC GR
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGR 514
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V +A+ + G + ++ G C+VGK ++A+ ++ A + P+ Y
Sbjct: 515 VMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE--------------- 381
++NG+CKIG+ DE +SL +EM +G+KP+ +N + L E G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634
Query: 382 --------------------LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
D AI L K++ M+ + ++ NT+I G+ + R+++
Sbjct: 635 IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR-RVEEA 693
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVV 481
+DL + RSG YS ++ +EG VE + M + L VV
Sbjct: 694 KDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSM--QNAGCEPDSRLLNHVV 751
Query: 482 DALLLM-WIVTGGSWISR 498
LL IV G+++S+
Sbjct: 752 RELLKKNEIVRAGAYLSK 769
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 163/345 (47%), Gaps = 38/345 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIKAY + G + A+ F++ + + +Y +++ L R+ + A E F+Q++ +
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQG 459
Query: 189 VVPP----------------------------------DVSTYTTMIRGYCKMGMIENAK 214
V P D+ ++++I CK+G + +A+
Sbjct: 460 VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQ 519
Query: 215 KVFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+FD+ + + P + Y+ +++G+C G++E+A + + M++ G PN++ Y ++ G
Sbjct: 520 NIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGY 579
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C GR+DE L +M G K + + ++ GL G+ A + E+ + +
Sbjct: 580 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 639
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +V+ G K DEAI L KE+RA +K + + N + + + ++ A L
Sbjct: 640 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 699
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ + +P V+Y+ +I L + +G +++ ED+ M +G D
Sbjct: 700 ISRSGLVPCVVTYSIMITNL-IKEGLVEEAEDMFSSMQNAGCEPD 743
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 138/315 (43%), Gaps = 7/315 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P+ YH + +L + LIS ++ N L S +I G V A
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELIS---EIMNNGMHLDIVLFSSIINNLCKLGRVMDA 518
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
F + Y+ L+ V ++ A F +V + P DV Y T++
Sbjct: 519 QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDV-VYGTLVN 577
Query: 203 GYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
GYCK+G I+ +F M +KP+ + YN +I+G + G AK +EM G
Sbjct: 578 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 637
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N+ TY+ ++ GL N DEA L ++R K ++ T +M+ G+ + ++A
Sbjct: 638 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 697
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
++ + + P V +Y ++I K G +EA + M+ G +P N V R L++
Sbjct: 698 ASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKK 757
Query: 380 GELDRAILLLKQMPQ 394
E+ RA L ++ +
Sbjct: 758 NEIVRAGAYLSKIDE 772
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS-LLKEMRARGLKPTVFSFNAVF 373
A+ + ++ + D+ ++ GFC+ ++DEA+ LL G P VFS++ +
Sbjct: 130 ALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 189
Query: 374 RILVENGELDRAILLLKQMPQMD--CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L + G+ +A LL+ M + C P+ V+YNT+I G +G + DL M++
Sbjct: 190 KSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGF-FKEGDVNKACDLFKEMVQR 248
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G DF YS ++ C+ ++ +MV K
Sbjct: 249 GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 4/236 (1%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
+D L+ Y G + + F + Q YN ++ L A+ F
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 627
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCK 238
H++ E+ + + TY+ ++RG K + A +F M VK +++ NTMI G +
Sbjct: 628 HEMT-ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 686
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+EEAK + G P +TY+ MI L G V+EA+ + + M+ G + +
Sbjct: 687 TRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 746
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+++ L + +A YL + E N + + + ++++ F G E I L
Sbjct: 747 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 203/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 147/275 (53%), Gaps = 4/275 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PDV TYT +I C + A K+ D M KP+++ YN ++NG CK+G L+EA K
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+N M + G +PN +T+N ++ +C GR +A+ L+ +M G +V T ++ LC
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G +A+ L + P+ SY +++GFCK K D AI L+ M +RG P + +
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + L ++G++D A+ LL Q+ C P ++YNT+I GL G+ +L+ M
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV-GKTDQAVELLHEM 252
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G D YS L+ G EG VE ++ H++
Sbjct: 253 RGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDV 287
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 163/310 (52%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ + + + A +F + + P+V T+ ++R C G +A+K+
Sbjct: 53 TYNVLVNGMCKEGRLDEAIKFLNSMPSYGS-QPNVITHNIILRSMCSTGRWMDAEKLLTE 111
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ +N +IN C+KG L A + +M GC PN L+YN +++G C +
Sbjct: 112 MVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKK 171
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A + M G ++ T+ +ML LC GK D AV L + +P + +Y
Sbjct: 172 MDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 231
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G K+GK+D+A+ LL EMR +GLKP V +++++ L G+++ AI +
Sbjct: 232 VIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFG 291
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN +YN+I+ GLC A+ + + D + MI G Y+ L++G EG +
Sbjct: 292 VKPNAFTYNSIMFGLCKAQQTDRAI-DFLAYMISKGCKPTEVSYTILIEGIANEGLAKEA 350
Query: 457 MQIAHEMVTK 466
+++ +E+ ++
Sbjct: 351 LELLNELCSR 360
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 117/218 (53%), Gaps = 1/218 (0%)
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ + + C P+ +TY +I C V +A L+ +M G K +V T+ ++ G+C
Sbjct: 4 LDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCK 63
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G+ D+A+ +L ++ P+V ++ +++ C G+ +A LL EM +G P+V +
Sbjct: 64 EGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVT 123
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
FN + L G L RAI +L++MP C PN +SYN ++ G C K +M ++ M
Sbjct: 124 FNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEK-KMDRAIQYLEIM 182
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ G D Y+ +L C++G V+ +++ +++ +K
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSK 220
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 118/219 (53%), Gaps = 4/219 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL + + A ++ +V P D+ TY TM+ CK G ++ A ++ +
Sbjct: 158 SYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYP-DIVTYNTMLTALCKDGKVDAAVELLNQ 216
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
++ K P L+ YNT+I+G K G+ ++A + ++EM +G +P+ +TY+++I GL G+
Sbjct: 217 LSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGK 276
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+EA + G K N T+ S++ GLC + D+A+ +L ++ P SY +
Sbjct: 277 VEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTI 336
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+I G G + EA+ LL E+ +RG+ + V R+
Sbjct: 337 LIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVVRL 375
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++ A G V AA+ +Q L +YN+++ L +V A E H++ +
Sbjct: 197 MLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEM-RGK 255
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF-DV--MTVKPNLLAYNTMINGFCKKGELEEA 245
+ PDV TY+++I G + G +E A K F DV VKPN YN+++ G CK + + A
Sbjct: 256 GLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRA 315
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ M+++GC+P E++Y +I G+ G EA L+ ++ G S + +++
Sbjct: 316 IDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVVR 374
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI G V+ AI +FH + ++YNS++ L + A +F ++
Sbjct: 265 SSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMIS 324
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+ P +VS YT +I G G+ + A ++ +
Sbjct: 325 KGCKPTEVS-YTILIEGIANEGLAKEALELLN 355
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+L + + +C P+ ++Y +I C G Q ++ L+D M G D Y+ L+ G
Sbjct: 3 VLDRQLEKECYPDVITYTILIEATCAESGVGQAMK-LLDEMGSRGCKPDVVTYNVLVNGM 61
Query: 448 CEEGNVENVMQIAHEM 463
C+EG ++ ++ + M
Sbjct: 62 CKEGRLDEAIKFLNSM 77
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 194/409 (47%), Gaps = 10/409 (2%)
Query: 65 QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA----ASLLKNSNK 120
++ P A+ FN A++ P T+ Y + D +A LL+ +
Sbjct: 84 RSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLR 143
Query: 121 LSDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
++ + L+K + + A+ H+ ++ ++SY+ LL L A++
Sbjct: 144 VNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203
Query: 180 FFHQIVKENVV-PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING 235
+ + V PDV Y+T+I G+ K G + A +F M + P+ + Y+++++
Sbjct: 204 LLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
CK +++A+ + +M+N+G PN TYN +IYG G+ EA + +MR + +
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V T ++ LC GK +A + NP+V SY +++NG+ G + L
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
M G+ P +++FN + + G LD+A+++ +M P+ V+Y T+I LC
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI- 442
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G+M D + ++MI G D Y CL++G+C G++ ++ E++
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIM 491
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 185/380 (48%), Gaps = 43/380 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N L+ + A F+++ +++ V PDV TY T+I C++G +++A + F
Sbjct: 394 IYTFNVLIKAYANCGMLDKAMIIFNEM-RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M V P+ AY+ +I GFC G L +AK+ ++E+MN G + + ++++I LC
Sbjct: 453 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 512
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GRV +A+ + G + ++ G C+VGK ++A+ ++ A + P+ Y
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVY 572
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVF--------------------------- 367
++NG+CKIG+ DE +SL +EM +G+KP+
Sbjct: 573 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 632
Query: 368 --------SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
++N V R L +N D AI L K++ M+ N ++ NT+I G+ + R++
Sbjct: 633 SGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTR-RVE 691
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTR 479
+ +DL + RSG YS ++ +EG VE + M + L
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSM--QNAGCEPDSRLLNH 749
Query: 480 VVDALLLM-WIVTGGSWISR 498
VV LL IV G+++S+
Sbjct: 750 VVRELLKKNEIVRAGAYLSK 769
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 176/377 (46%), Gaps = 38/377 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I + G+V A F + Q +Y+S++ L + ++ AE F Q+V
Sbjct: 223 STVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVN 282
Query: 187 ENVVP----------------------------------PDVSTYTTMIRGYCKMGMIEN 212
+ V+P PDV T + ++ CK G I+
Sbjct: 283 KGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 342
Query: 213 AKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
A+ VFD M +K PN+ +Y M+NG+ KG L + + M+ G P+ T+N +I
Sbjct: 343 ARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIK 402
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G +D+A ++ +MR +G K +V T+++++ LC +GK D A+ +++ + P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
D +Y +I GFC G +A L+ E+ G+ + F+++ L + G + A +
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+ P V Y+ ++ G C+ G+M+ + D M+ +G + +Y L+ GYC+
Sbjct: 523 DLTVNVGLHPTAVVYSMLMDGYCLV-GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581
Query: 450 EGNVENVMQIAHEMVTK 466
G ++ + + EM+ K
Sbjct: 582 IGRIDEGLSLFREMLQK 598
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 139/315 (44%), Gaps = 7/315 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P+ YH + +L + LIS ++ N L F S +I G V A
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELIS---EIMNNGMHLDIVFFSSIINNLCKLGRVMDA 518
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
F + Y+ L+ V ++ A F +V + P DV Y T++
Sbjct: 519 QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDV-VYGTLVN 577
Query: 203 GYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
GYCK+G I+ +F M +KP+ + YN +I+G + G AK +EM G
Sbjct: 578 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 637
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N+ TYN ++ GL N DEA L ++R K N+ T +M+ G+ + ++A
Sbjct: 638 NKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLF 697
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
++ + + P V +Y ++I K G +EA + M+ G +P N V R L++
Sbjct: 698 ASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKK 757
Query: 380 GELDRAILLLKQMPQ 394
E+ RA L ++ +
Sbjct: 758 NEIVRAGAYLSKIDE 772
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 16/239 (6%)
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGL--------CINGRVDEAKML-MAKMRLNG-- 291
EEA ++E+ RG E N + L C +G + A R G
Sbjct: 46 EEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPR 105
Query: 292 -FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
T+ ++ + + A+ + ++ + ++ ++ GFC+ ++DEA
Sbjct: 106 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEA 165
Query: 351 IS-LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD--CLPNFVSYNTI 407
+ LL G P VFS++ + + L + G+ +A LL+ M + C P+ V+Y+T+
Sbjct: 166 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTV 225
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
I G +G + DL M++ G DF YS ++ C+ ++ +MV K
Sbjct: 226 IDGF-FKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 4/236 (1%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
+D L+ Y G + + F + Q YN ++ L A+ F
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 627
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCK 238
H++ E+ + + TY ++RG K + A +F M VK N++ NTMI G +
Sbjct: 628 HEMT-ESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQ 686
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+EEAK + G P +TY+ MI L G V+EA+ + + M+ G + +
Sbjct: 687 TRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 746
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+++ L + +A YL + E N + + + ++++ F G E I L
Sbjct: 747 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 173/327 (52%), Gaps = 12/327 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N+++ L R+ ++ A + I K + P V+TY ++I GYCK G N V
Sbjct: 191 IYTFNTVISGLCRIGQLRKAGDVAKDI-KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVD 249
Query: 218 DVMT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++ + P + + +ING+CK A + EM +G + +TYN++I GL
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G+V+E LM +M G N T +LKG C G A ++ + E N+ PDV
Sbjct: 310 CSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV 369
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
Y ++I+G+ ++GK ++A+++ + M +G+ P V ++N + +G+ A LL +
Sbjct: 370 VIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDE 429
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + + V+YN +I LC KG ++ L+D M G + Y+ +++G+C++G
Sbjct: 430 MKEKGIEADVVTYNVLIGALC-CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Query: 452 NVENVMQIAHEMVTKKGRLLKLKNFLT 478
N+++ A+E+ T+ + K N +T
Sbjct: 489 NIKS----AYEIRTRMEKCRKRANVVT 511
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 147/296 (49%), Gaps = 5/296 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y N AA+ F + KQ A + +YNSL+ L ++ + ++
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P ++ T+ +++G+CK GM+ +A D MT V+P+++ Y +I+G+ + G++E+A
Sbjct: 330 LSPNEI-TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDA 388
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
M +G PN TYN +I G +G A L+ +M+ G + +V T+ ++
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ +AV L + E + P+ +Y +I GFC G A + M +
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
V ++N + + G++D A LL +M +PN ++Y TI G+ M KG D+
Sbjct: 509 VVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM-MEKGYTPDI 563
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 130/249 (52%), Gaps = 5/249 (2%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P+ + N ++ G ++ A+K + R P+ T+N +I GLC G++ +A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCV---VGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
+ ++ G +V+T+ S++ G C G L+ ++EA ++P ++ V+IN
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G+CK + A+ + +EM+ +G+ +V ++N++ L G+++ + L+++M + P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
N +++ ++ G C KG M D D +D M D +Y+ L+ GY G +E+ M +
Sbjct: 333 NEITFGCVLKGFC-KKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391
Query: 460 AHEMVTKKG 468
E + KKG
Sbjct: 392 -KEAMAKKG 399
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 169/341 (49%), Gaps = 5/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A+ G + A+ + Q Y++N L+ + + + F ++ +N
Sbjct: 95 LIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQN 154
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P+V TY+ +I CK G +E A KVF M +PN+ Y +MI+G K G +++A
Sbjct: 155 C-SPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKA 213
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
EM + G + YN++I+GL +GR D A L +M G + + T S++ G
Sbjct: 214 FFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYG 273
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L V G+ +A + + DV Y V+I+ CK + DEA + E+ GL P
Sbjct: 274 LGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPD 333
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V++FNA+ L ++G + A +LL M + C P+ YNT+I GL GR+++ L+
Sbjct: 334 VYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGL-RKSGRVEEAGQLL 392
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M G+ D Y+ L+ C+ G +E+ +++ E+ K
Sbjct: 393 LEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAK 433
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 48/347 (13%)
Query: 150 KQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
++++N C + +Y+ L+ + + ++ A + F + K P++ TYT+MI G K
Sbjct: 148 EEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDM-KSRGCRPNIFTYTSMIDGLGK 206
Query: 207 MGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G ++ A +F+ MT + + YN++I+G + G + A K EM+++G +P+ +T
Sbjct: 207 SGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVT 266
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMR----------------------------------- 288
+ +++YGL + GR EA+ + + R
Sbjct: 267 FTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELE 326
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+G +V T +++ GLC G+ A L ++ A PDV Y +I+G K G+ +
Sbjct: 327 EDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVE 386
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
EA LL EM++ G +P V ++N + + G ++ A+ L +++ N V+YNTI+
Sbjct: 387 EAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG-FANTVTYNTIL 445
Query: 409 CGLCMAKGRMQDVEDLVDRM----IRSGHNLDFTMYSCLLKGYCEEG 451
GLCMA GR+ + L + M + + DF Y+ LL G + G
Sbjct: 446 NGLCMA-GRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG 491
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 152/296 (51%), Gaps = 13/296 (4%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + +I G G+V A F F + A YNSL+ L R A + F +
Sbjct: 195 FTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFRE 254
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF----DV-MTVKPNLLAYNTMINGFCK 238
++ + + PD T+T+++ G G A+++F DV + NL YN +I+ CK
Sbjct: 255 MLSKGL-QPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNL--YNVLIDTLCK 311
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
L+EA + E+ G P+ T+NA++ GLC +GR+ +A +L+ M+ G +V+
Sbjct: 312 SKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTV 371
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ GL G+ ++A L + PDV +Y +I+ CK G+ ++A+ L +E+
Sbjct: 372 YNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEIS 431
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ--MDCL--PNFVSYNTIICG 410
A+G TV ++N + L G +D A L M Q +D + P+FV+Y T++ G
Sbjct: 432 AKGFANTV-TYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 123/235 (52%), Gaps = 9/235 (3%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ L+ G G A F +A+ + + YN L+ L + + A E F ++
Sbjct: 267 FTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELE 326
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
++ +VP DV T+ ++ G CK G I +A + M P++ YNT+I+G K G +
Sbjct: 327 EDGLVP-DVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRV 385
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EEA + + EM + G P+ +TYN +I C GR+++A L ++ GF + V T+ ++
Sbjct: 386 EEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTV-TYNTI 444
Query: 303 LKGLCVVGKFDQAV----GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
L GLC+ G+ D+A G + ++ ++PD +Y ++NG + G S+ A SL
Sbjct: 445 LNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 125/270 (46%), Gaps = 4/270 (1%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEEAKKCMNEMM 253
+ + RGY G++E + + M L AYN++I+ F K G ++A M
Sbjct: 57 FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMG 116
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G RP+ T+N ++ RVD L +M+ NV T+ ++ +C G +
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVE 176
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ ++ P++ +Y +I+G K G D+A L +EM + GL T +N++
Sbjct: 177 KALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLI 236
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L +G D A L ++M P+ V++ +++ GL +A GR + + G
Sbjct: 237 HGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVA-GRASEARRIFQEARDVGC 295
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
LD +Y+ L+ C+ ++ +I E+
Sbjct: 296 ALDVNLYNVLIDTLCKSKRLDEAWEIFGEL 325
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+ +G G +++V L+ + +Y +I+ F K G + +A+++ + M G
Sbjct: 60 LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+P ++FN + + +D L ++M +C PN ++Y+ +I +C G + +
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +D R FT Y+ ++ G + G+V+ + EM ++
Sbjct: 180 KVFLDMKSRGCRPNIFT-YTSMIDGLGKSGHVDKAFFLFEEMTSE 223
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 201/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H +I A L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMIPEAKXLIQIVVSRKGKGSASAVFAAJLETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+SD ++ S LI AY + G ++ AI + K+ + + ++ L+++ KL
Sbjct: 63 ISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ ++ +++PD+ +Y +I G CK G +A L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 165/294 (56%), Gaps = 5/294 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ L + + A E + Q++ + + PDV T++ +I G+C +G +E A +F M
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAKKI-SPDVVTFSALIYGFCIVGQLEEAFGLFREM 269
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+K P+ +N +++ CK+G L+ AK + MM G PN +TY++++ G C+ +V
Sbjct: 270 VLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQV 329
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
++AK ++ + G N ++ +M+ G C + D+A+ ++ + PD +Y +
Sbjct: 330 NKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSL 389
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G CK G+ A L+ EM G +F++N + L +N +D+AI L+K++
Sbjct: 390 IDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGI 449
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
P+ ++N +I GLC GR+++ +D+ ++ G++++ Y+ ++ G C+EG
Sbjct: 450 QPDMYTFNILIYGLCKV-GRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEG 502
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 177/342 (51%), Gaps = 9/342 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSDFFI--SKLIKAYGDRGNVKAAIFWFHQAK 150
Y I D L H L+ A L + K+S + S LI + G ++ A F +
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMV 270
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
Y++N L+ L + ++K A+ ++KE V+P +V TY++++ GYC + +
Sbjct: 271 LKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMP-NVVTYSSLMDGYCLVNQV 329
Query: 211 ENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
AK V + M PN +Y TMINGFCK ++EA N+M +G P+++TYN++
Sbjct: 330 NKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSL 389
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC +GR+ A L+ +M NG N+ T+ ++ LC DQA+ ++ + + +
Sbjct: 390 IDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGI 449
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD+ ++ ++I G CK+G+ A + +++ ++G +++N + L + G D A
Sbjct: 450 QPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEA 509
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
LL +M +P+ V+Y T+I L K + E L+ MI
Sbjct: 510 LLSKMDDNGIIPDAVTYETLIQAL-FHKDENEKAEKLLREMI 550
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 155/309 (50%), Gaps = 5/309 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++N L+ + + A +I+K PD T+ T+I+G C G ++ A
Sbjct: 103 IFTFNILINCYCHMAEMNFAFSMMAKILKMGY-EPDTITFNTLIKGLCLNGKVKEALHFH 161
Query: 218 D-VMTVKPNL--LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D V+ + +L +Y T+ING CK GE A + + ++ + + N + YN +I LC +
Sbjct: 162 DHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKH 221
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
V +A L ++M +V T +++ G C+VG+ ++A G R ++ N+NPD ++
Sbjct: 222 KLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTF 281
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++ CK G A ++L M G+ P V +++++ ++++A +L + Q
Sbjct: 282 NILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQ 341
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
M PN SY T+I G C K + + L + M G D Y+ L+ G C+ G +
Sbjct: 342 MGAAPNAHSYCTMINGFCKIK-MVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRIS 400
Query: 455 NVMQIAHEM 463
++ EM
Sbjct: 401 YAWELVDEM 409
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 165/340 (48%), Gaps = 19/340 (5%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN------SIKLAEEF-FHQIVKENVV 190
+V + F+ + + + + +N +LG LV+ N +I L+ FH I
Sbjct: 46 DVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGIT----- 100
Query: 191 PPDVSTYTTMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAK 246
PD+ T+ +I YC M + A K+ M +P+ + +NT+I G C G+++EA
Sbjct: 101 -PDIFTFNILINCYCHMAEMNFAFSMMAKILK-MGYEPDTITFNTLIKGLCLNGKVKEAL 158
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ ++ G ++ +Y +I GLC G A ++ K+ K NV + +++ L
Sbjct: 159 HFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSL 218
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C A ++ ++PDV ++ +I GFC +G+ +EA L +EM + + P
Sbjct: 219 CKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDY 278
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++FN + L + G L A +L M + +PN V+Y++++ G C+ ++ + +++
Sbjct: 279 YTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVN-QVNKAKHVLN 337
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + G + Y ++ G+C+ V+ + + ++M K
Sbjct: 338 TISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFK 377
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 125/251 (49%), Gaps = 18/251 (7%)
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
G P+ T+N +I C ++ A +MAK+ G++ + T +++KGLC+ GK +
Sbjct: 97 HGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKE 156
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+ + +V+ + D SY +ING CKIG++ A+ +L+++ + +K V +N +
Sbjct: 157 ALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIID 216
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L ++ + A L QM P+ V+++ +I G C+ G++++ L M+ N
Sbjct: 217 SLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIV-GQLEEAFGLFREMVLKNIN 275
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGS 494
D+ ++ L+ C+EGN++ KN L ++ ++ +VT S
Sbjct: 276 PDYYTFNILVDALCKEGNLKGA-----------------KNMLVVMMKEGVMPNVVTYSS 318
Query: 495 WISRFVFVHQV 505
+ + V+QV
Sbjct: 319 LMDGYCLVNQV 329
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 101/184 (54%), Gaps = 6/184 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
+YNSL+ L + I A E ++ +N P ++ TY +I CK ++ A KK
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEM-HDNGQPANIFTYNCLIDALCKNHHVDQAIALVKK 443
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ D ++P++ +N +I G CK G L+ A+ +++++G N TYN M+ GLC G
Sbjct: 444 IKD-QGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEG 502
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
DEA+ L++KM NG + T++++++ L + ++A LR ++ ++ ++ E
Sbjct: 503 LFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLE 562
Query: 336 VVIN 339
+V++
Sbjct: 563 MVLH 566
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 249/534 (46%), Gaps = 100/534 (18%)
Query: 1 MATPRRSLTNISQIPD--QSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIV 58
M+ P R L+ +S+ P+ +S + S+ S I SP ++SS FSL L
Sbjct: 60 MSVPHRLLSILSK-PNWHKSPSLKSMVSAI--------SPSHVSSL----FSLDL----- 101
Query: 59 TKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA------- 111
+P AL F +W S NP +Y H+ Y ++ +L+++ + +
Sbjct: 102 --------DPKTALNFSHWISQ---NP-RYKHSVYSYASLLTLLINNGYVGVVFKIRLLM 149
Query: 112 -------------ASLLKNSNKLSDFFISK--LIKAYGDRGNVKAAIFWFHQAKQI---- 152
L + NK F + +I Y N A + KQ+
Sbjct: 150 IKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEM 209
Query: 153 -ENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
E+ C +Y+YN ++ ++ +++ A ++ +IV E + PD TYT++I GYC+
Sbjct: 210 LEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV-EAGLDPDFFTYTSLIMGYCQRKD 268
Query: 210 IENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+++A KVF+ M +K N +AY +I+G C ++EA +M + C P TY
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I LC + R EA L+ +M G K N+ T+ ++ LC KF++A L ++E
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P+V +Y +ING+CK G ++A+ +++ M +R L P ++N + + ++ + +A+
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAM 447
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMA-------------------------------- 414
+L +M + LP+ V+YN++I G C +
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 415 --KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R+++ DL D + + G N + MY+ L+ GYC+ G V+ + +M++K
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 166/311 (53%), Gaps = 9/311 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y L+ L + A E Q++++ ++P +V TY +I GYCK GMIE+A V
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP-NVITYNALINGYCKRGMIEDAVDVV 416
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
++M + PN YN +I G+C K + +A +N+M+ R P+ +TYN++I G C +
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A L++ M G + T+ SM+ LC + ++A ++ + +NP+V Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G+CK GK DEA +L++M ++ P +FNA+ L +G+L A LL ++M +
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG--- 451
+ P VS +TI+ + G +M+ SG D Y+ ++ YC EG
Sbjct: 596 IGLQPT-VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 452 NVENVMQIAHE 462
+ E++M E
Sbjct: 655 DAEDMMAKMRE 665
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 184/362 (50%), Gaps = 22/362 (6%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
++LIK Y + NV A+ ++ + + + +YNSL+ R + A +
Sbjct: 432 NELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+VP D TYT+MI CK +E A +FD + V PN++ Y +I+G+CK G+++
Sbjct: 491 RGLVP-DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +M+++ C PN LT+NA+I+GLC +G++ EA +L KM G + VST ++
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
L G FD A + ++ + PD +Y I +C+ G+ +A ++ +MR G+
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC-MAKGRMQDVE 422
P +F+++++ + + G+ + A +LK+M C P+ ++ ++I L M G+ + E
Sbjct: 670 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSE 729
Query: 423 ----------------DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L+++M+ + Y L+ G CE GN+ ++ M
Sbjct: 730 PELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRN 789
Query: 467 KG 468
+G
Sbjct: 790 EG 791
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 152/277 (54%), Gaps = 5/277 (1%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
+ Y T++ + G+++ K+V+ M V PN+ YN M+NG+CK G +EEA + ++
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
+++ G P+ TY ++I G C +D A + +M L G + N + ++ GLCV
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ D+A+ + + P V++Y V+I C + EA++L+KEM G+KP + ++
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ L + ++A LL QM + +PN ++YN +I G C +G ++D D+V+ M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC-KRGMIEDAVDVVELMES 421
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ + Y+ L+KGYC + NV M + ++M+ +K
Sbjct: 422 RKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERK 457
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 161/415 (38%), Gaps = 129/415 (31%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y S++ L + ++ A + F + ++ V P+V YT +I GYCK G ++ A + +
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAK----------------------------- 246
M K PN L +N +I+G C G+L+EA
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 247 ------KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+M++ G +P+ TY I C GR+ +A+ +MAKMR NG ++ T+
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 301 SMLKG--------------------------------------------------LCVVG 310
S++KG LC +
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMS 736
Query: 311 ---KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG---------------------- 345
+FD V L ++E ++ P+ KSYE +I G C++G
Sbjct: 737 NMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Query: 346 --------------KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
K +EA ++ +M G P + S + L + GE +R + +
Sbjct: 797 LVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+ Q + +++ II G+ +G ++ +L + M ++G YS L++G
Sbjct: 857 LLQCGYYEDELAWKIIIDGV-GKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 135/310 (43%), Gaps = 21/310 (6%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKL 129
HA F + P+ + +TT T + L + + A + +N F S L
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE-DMMAKMRENGVSPDLFTYSSL 678
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
IK YGD G F F K++ + C S ++ L ++ + +K K+
Sbjct: 679 IKGYGDLGQTN---FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYG--------KQKG 727
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
P++ + M+ + ++E + +V PN +Y +I G C+ G L A+K
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVE----HSVTPNAKSYEKLILGICEVGNLRVAEKVF 783
Query: 250 NEMM-NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M N G P+EL +NA++ C + +EA ++ M G + + K ++ GL
Sbjct: 784 DHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYK 843
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G+ ++ +N+++ D +++++I+G K G + L M G K FS
Sbjct: 844 KGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK---FS 900
Query: 369 FNAVFRILVE 378
+ + +L+E
Sbjct: 901 -SQTYSLLIE 909
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 186/363 (51%), Gaps = 6/363 (1%)
Query: 107 LISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLG 166
+IS+ + + + + + LIK + + A+ F + ++ + ++N+LL
Sbjct: 98 VISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH 157
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VK 223
L + + A FHQ+ + P+V T+TT++ G C+ G I A + D M ++
Sbjct: 158 GLCVEDRVSEALNLFHQMFE-TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQ 216
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMN-RGCRPNELTYNAMIYGLCINGRVDEAKM 282
P + Y T+++G CKKG+ A + +M PN + Y+A+I LC +GR +A+
Sbjct: 217 PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M+ G ++ T+ SM+ G C G++ A L+ ++E ++PDV +Y +IN F
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K GK EA L EM RG+ P +++++ + LD A + M C PN +
Sbjct: 337 KEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI 396
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++NT+I G C AK R+ D +L+ M +G D T Y+ L+ G+ G++ + + E
Sbjct: 397 TFNTLIDGYCGAK-RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 463 MVT 465
M++
Sbjct: 456 MIS 458
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 192/389 (49%), Gaps = 20/389 (5%)
Query: 95 YTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y+AI D L S A +L ++ D F + +I + G A +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + + +YN+L+ V+ AEE + +++ ++P + TY++MI G+CK +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI-TYSSMIDGFCKQNRL 376
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ +F +M K PNL+ +NT+I+G+C +++ + ++EM G + TYN +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-- 325
I+G + G ++ A L+ +M +G ++ T ++L GLC GK A+ + + ++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 326 ---------NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ PDV++Y ++I+G GK EA L +EM RG+ P +++++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ LD A + M PN V++ T+I G C A GR+ D +L M R G +
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA-GRVDDGLELFCEMGRRGIVAN 615
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
Y L+ G+ + GN+ + I EM++
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMIS 644
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 166/320 (51%), Gaps = 16/320 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++++ L + A+ F ++ +E + PD+ TY +MI G+C G +A+++ M
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEM-QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ YN +IN F K+G+ EA++ +EM+ RG PN +TY++MI G C R+
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A+ + M G N+ T +++ G C + D + L + E + D +Y +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM----- 392
I+GF +G + A+ LL+EM + GL P + + + + L +NG+L A+ + K M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 393 ------PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
P P+ +YN +I GL + +G+ + E+L + M G D YS ++ G
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGL-INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 447 YCEEGNVENVMQIAHEMVTK 466
C++ ++ Q+ M +K
Sbjct: 556 LCKQSRLDEATQMFDSMGSK 575
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 163/336 (48%), Gaps = 6/336 (1%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V A+ FHQ + + ++ +L+ L R I A +++++ + P + TY
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI-TYG 223
Query: 199 TMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T++ G CK G +A +K+ +V + PN++ Y+ +I+ CK G +A+ EM
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G P+ TYN+MI G C +GR +A+ L+ +M +V T+ +++ GKF +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A ++ + P+ +Y +I+GFCK + D A + M +G P + +FN +
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+D + LL +M + + + +YNT+I G + G + DL+ MI SG
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV-GDLNAALDLLQEMISSGLC 462
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
D LL G C+ G +++ +++ M K L
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 126/246 (51%), Gaps = 2/246 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ ++ ++ +I FC +L A ++ G P+ +T+N +++GLC+ RV EA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L +M + NV T +++ GLC G+ +AV L +ME + P +Y +++G
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 342 CKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CK G + A++LL++M + P V ++A+ L ++G A L +M + P+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+YN++I G C + GR D E L+ M+ + D Y+ L+ + +EG ++
Sbjct: 290 LFTYNSMIVGFC-SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348
Query: 461 HEMVTK 466
EM+ +
Sbjct: 349 DEMLPR 354
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 15/278 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y + + H+ + A +YN+L+ V + A + +++
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------VKPNLLAYNTMIN 234
+ P D+ T T++ G C G +++A ++F VM V+P++ YN +I+
Sbjct: 461 LCP-DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
G +G+ EA++ EM +RG P+ +TY++MI GLC R+DEA + M F
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
NV T +++ G C G+ D + + + + +Y +I GF K+G + A+ +
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIF 639
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+EM + G+ P + + L EL RA+ +L+++
Sbjct: 640 QEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 139/299 (46%), Gaps = 15/299 (5%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I + + + AA F+ L ++N+L+ I E H++ +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+V D +TY T+I G+ +G + A + M P+++ +T+++G C G+L+
Sbjct: 424 TGLVA-DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 244 EAKKCMNEMMNR-----------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+A + M G P+ TYN +I GL G+ EA+ L +M G
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ T+ SM+ GLC + D+A ++ + +P+V ++ +ING+CK G+ D+ +
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L EM RG+ ++ + + G ++ A+ + ++M P+ ++ ++ GL
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M + R + ++ +I C ++ A K+ G +V T ++L GLCV
Sbjct: 103 QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVE 162
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ +A+ + E P+V ++ ++NG C+ G+ EA++LL M GL+PT ++
Sbjct: 163 DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222
Query: 370 NAVFRILVENGELDRAILLLKQMPQMD-CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ + + G+ A+ LL++M ++ +PN V Y+ II LC GR D ++L M
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC-KDGRHSDAQNLFTEM 281
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G D Y+ ++ G+C G + Q+ EM+ +K
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 17/245 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI + G++ AA+ + I +G C + + ++LL L +K A E F + K
Sbjct: 436 LIHGFYLVGDLNAALDLLQE--MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Query: 187 E----------NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
N V PDV TY +I G G A+++++ M + P+ + Y++MI
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G CK+ L+EA + + M ++ PN +T+ +I G C GRVD+ L +M G
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
N T+ +++ G VG + A+ + ++ + + PD + ++ G + A+++
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673
Query: 354 LKEMR 358
L++++
Sbjct: 674 LEKLQ 678
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 107/234 (45%), Gaps = 2/234 (0%)
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+GF + LE+A ++M+ P+ + + ++ + R D L KM +
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
++ + ++K C K A+ + + ++PDV ++ +++G C + EA++L
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
+M +P V +F + L G + A+ LL +M + P ++Y TI+ G+C
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC- 230
Query: 414 AKGRMQDVEDLVDRMIRSGHNL-DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
KG +L+ +M H + + +YS ++ C++G + + EM K
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+S++ L + + + A + F + ++ P+V T+TT+I GYCK G +++ ++F
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSF-SPNVVTFTTLINGYCKAGRVDDGLELFCE 606
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + N + Y T+I GF K G + A EM++ G P+ +T M+ GL
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666
Query: 277 VDEAKMLMAKMRLN 290
+ A ++ K++++
Sbjct: 667 LKRAVAMLEKLQMS 680
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 186/363 (51%), Gaps = 6/363 (1%)
Query: 107 LISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLG 166
+IS+ + + + + + LIK + + A+ F + ++ + ++N+LL
Sbjct: 98 VISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLH 157
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VK 223
L + + A FHQ+ + P+V T+TT++ G C+ G I A + D M ++
Sbjct: 158 GLCVEDRVSEALNLFHQMFE-TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQ 216
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMN-RGCRPNELTYNAMIYGLCINGRVDEAKM 282
P + Y T+++G CKKG+ A + +M PN + Y+A+I LC +GR +A+
Sbjct: 217 PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M+ G ++ T+ SM+ G C G++ A L+ ++E ++PDV +Y +IN F
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K GK EA L EM RG+ P +++++ + LD A + M C PN +
Sbjct: 337 KEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI 396
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++NT+I G C AK R+ D +L+ M +G D T Y+ L+ G+ G++ + + E
Sbjct: 397 TFNTLIDGYCGAK-RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 463 MVT 465
M++
Sbjct: 456 MIS 458
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 192/389 (49%), Gaps = 20/389 (5%)
Query: 95 YTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y+AI D L S A +L ++ D F + +I + G A +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + + +YN+L+ V+ AEE + +++ ++P + TY++MI G+CK +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI-TYSSMIDGFCKQNRL 376
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ +F +M K PNL+ +NT+I+G+C +++ + ++EM G + TYN +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-- 325
I+G + G ++ A L+ +M +G ++ T ++L GLC GK A+ + + ++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 326 ---------NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ PDV++Y ++I+G GK EA L +EM RG+ P +++++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ LD A + M PN V++ T+I G C A GR+ D +L M R G +
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA-GRVDDGLELFCEMGRRGIVAN 615
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
Y L+ G+ + GN+ + I EM++
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMIS 644
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 166/320 (51%), Gaps = 16/320 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++++ L + A+ F ++ +E + PD+ TY +MI G+C G +A+++ M
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEM-QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ YN +IN F K+G+ EA++ +EM+ RG PN +TY++MI G C R+
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A+ + M G N+ T +++ G C + D + L + E + D +Y +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM----- 392
I+GF +G + A+ LL+EM + GL P + + + + L +NG+L A+ + K M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 393 ------PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
P P+ +YN +I GL + +G+ + E+L + M G D YS ++ G
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGL-INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 447 YCEEGNVENVMQIAHEMVTK 466
C++ ++ Q+ M +K
Sbjct: 556 LCKQSRLDEATQMFDSMGSK 575
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 163/336 (48%), Gaps = 6/336 (1%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V A+ FHQ + + ++ +L+ L R I A +++++ + P + TY
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI-TYG 223
Query: 199 TMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T++ G CK G +A +K+ +V + PN++ Y+ +I+ CK G +A+ EM
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G P+ TYN+MI G C +GR +A+ L+ +M +V T+ +++ GKF +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A ++ + P+ +Y +I+GFCK + D A + M +G P + +FN +
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+D + LL +M + + + +YNT+I G + G + DL+ MI SG
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV-GDLNAALDLLQEMISSGLC 462
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
D LL G C+ G +++ +++ M K L
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 126/246 (51%), Gaps = 2/246 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ ++ ++ +I FC +L A ++ G P+ +T+N +++GLC+ RV EA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L +M + NV T +++ GLC G+ +AV L +ME + P +Y +++G
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 342 CKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CK G + A++LL++M + P V ++A+ L ++G A L +M + P+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+YN++I G C + GR D E L+ M+ + D Y+ L+ + +EG ++
Sbjct: 290 LFTYNSMIVGFC-SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348
Query: 461 HEMVTK 466
EM+ +
Sbjct: 349 DEMLPR 354
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 15/278 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y + + H+ + A +YN+L+ V + A + +++
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------VKPNLLAYNTMIN 234
+ P D+ T T++ G C G +++A ++F VM V+P++ YN +I+
Sbjct: 461 LCP-DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
G +G+ EA++ EM +RG P+ +TY++MI GLC R+DEA + M F
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
NV T +++ G C G+ D + + + + +Y +I GF K+G + A+ +
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIF 639
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+EM + G+ P + + L EL RA+ +L+++
Sbjct: 640 QEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 139/299 (46%), Gaps = 15/299 (5%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I + + + AA F+ L ++N+L+ I E H++ +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+V D +TY T+I G+ +G + A + M P+++ +T+++G C G+L+
Sbjct: 424 TGLVA-DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 244 EAKKCMNEMMNR-----------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+A + M G P+ TYN +I GL G+ EA+ L +M G
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ T+ SM+ GLC + D+A ++ + +P+V ++ +ING+CK G+ D+ +
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L EM RG+ ++ + + G ++ A+ + ++M P+ ++ ++ GL
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M + R + ++ +I C ++ A K+ G +V T ++L GLCV
Sbjct: 103 QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVE 162
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ +A+ + E P+V ++ ++NG C+ G+ EA++LL M GL+PT ++
Sbjct: 163 DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222
Query: 370 NAVFRILVENGELDRAILLLKQMPQMD-CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ + + G+ A+ LL++M ++ +PN V Y+ II LC GR D ++L M
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC-KDGRHSDAQNLFTEM 281
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G D Y+ ++ G+C G + Q+ EM+ +K
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 17/245 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI + G++ AA+ + I +G C + + ++LL L +K A E F + K
Sbjct: 436 LIHGFYLVGDLNAALDLLQE--MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Query: 187 E----------NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
N V PDV TY +I G G A+++++ M + P+ + Y++MI
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G CK+ L+EA + + M ++ PN +T+ +I G C GRVD+ L +M G
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
N T+ +++ G VG + A+ + ++ + + PD + ++ G + A+++
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673
Query: 354 LKEMR 358
L++++
Sbjct: 674 LEKLQ 678
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 107/234 (45%), Gaps = 2/234 (0%)
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+GF + LE+A ++M+ P+ + + ++ + R D L KM +
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
++ + ++K C K A+ + + ++PDV ++ +++G C + EA++L
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
+M +P V +F + L G + A+ LL +M + P ++Y TI+ G+C
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC- 230
Query: 414 AKGRMQDVEDLVDRMIRSGHNL-DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
KG +L+ +M H + + +YS ++ C++G + + EM K
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+S++ L + + + A + F + ++ P+V T+TT+I GYCK G +++ ++F
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSF-SPNVVTFTTLINGYCKAGRVDDGLELFCE 606
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + N + Y T+I GF K G + A EM++ G P+ +T M+ GL
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666
Query: 277 VDEAKMLMAKMRLN 290
+ A ++ K++++
Sbjct: 667 LKRAVAMLEKLQMS 680
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 209/440 (47%), Gaps = 37/440 (8%)
Query: 33 PQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTT 92
P+NP L++ + L + V+K+I N AL FF W S + Y H
Sbjct: 57 PKNPE--------LNRLASTLRPHHVSKIINTHINTDTALQFFYWIS----KRHFYKHDM 104
Query: 93 PCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQI 152
C+ ++ + L+ +++ A D +IKA + +K + H
Sbjct: 105 GCFVSMLNRLVKDKILAPA-----------DHVRILMIKACRNEDELKRVTDFLHGISSS 153
Query: 153 ENGA---CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
++G LYS+N+LL L + + + A+ + QI V P + T+ TMI CK G
Sbjct: 154 DSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSG-VKPSLLTFNTMINILCKKGK 212
Query: 210 IENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
++ A VF+ + + P+ Y ++I G C+ +L++A + + M+ GC PN +TY+
Sbjct: 213 VQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYST 272
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I GLC GR+ EA ++ +M G + V T+ + LC +G+ D A+ +R++ +
Sbjct: 273 LINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKG 332
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+P V++Y +I+G + GK + AI + +M GL P ++NA+ L G A+
Sbjct: 333 CSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIAL 392
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFTMYSCL 443
+ M L N +YN II GL M D+E + ++M++ G + Y+ L
Sbjct: 393 KIFDWMEGHGTLANAQTYNQIIKGLF----GMDDIEKAMVVFNKMLKDGPSPTVVTYNTL 448
Query: 444 LKGYCEEGNVENVMQIAHEM 463
+ + G + N + + M
Sbjct: 449 IVENLKRGYLNNATRFLYMM 468
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 176/387 (45%), Gaps = 14/387 (3%)
Query: 85 PNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIF 144
P Y +T P +++ D+ I++ S+ K S + +I G ++ AI
Sbjct: 300 PTVYTYTVP-ISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIG 358
Query: 145 WFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+H K ++ G +YN+L+ L +A + F + + + TY +I+
Sbjct: 359 MYH--KMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLA-NAQTYNQIIK 415
Query: 203 GYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
G M IE A VF+ M P ++ YNT+I K+G L A + + M C P
Sbjct: 416 GLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEP 475
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+E TY +I G C G++D A +M G N T+ +M+ G C GK D A+
Sbjct: 476 DERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLF 535
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ E + +++Y +I+G K + EA +M +GL+P ++ ++ L +N
Sbjct: 536 ERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKN 595
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
+ A + +M + +CLPN +Y ++I GLC +G++ D +R+ +G
Sbjct: 596 TATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQ-EGKV----DAAERLTENGCEPTIDT 650
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTK 466
YS L+ G C EG Q+ M K
Sbjct: 651 YSTLVSGLCREGRSNEASQLVENMKEK 677
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 166/334 (49%), Gaps = 9/334 (2%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG + A + + K+ +Y L+ + + A FF++++K + P+
Sbjct: 455 RGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGI-SPNQW 513
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TYT MI GYCK G I+ A +F+ M ++ YN +I+G K EA+K +M
Sbjct: 514 TYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKM 573
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+G +PN +TY ++I GLC N + A + +M N T+ S++ GLC GK
Sbjct: 574 TEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKV 633
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D A + E P + +Y +++G C+ G+S+EA L++ M+ +GL P++ + ++
Sbjct: 634 DAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSL 689
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
++ ++D A+ + M P+ Y +IC LC R ++ ++ +++
Sbjct: 690 LVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALC-GVSRAEEALNIFQSLLKKQ 748
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
N D +++ L+ G +EG+ + M+ + M ++
Sbjct: 749 WNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESR 782
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 145/302 (48%), Gaps = 8/302 (2%)
Query: 106 SLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
S S +LK + + + +I Y G + A+ F + ++ A + +YN+++
Sbjct: 495 SATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAII 554
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK-- 223
L + N AE+F ++ ++ + P + TYT++I G CK A K+F M K
Sbjct: 555 SGLSKGNRFSEAEKFCAKMTEQGLQPNTI-TYTSLINGLCKNTATNLAFKIFHEMEKKNC 613
Query: 224 -PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
PN Y ++I G C++G+++ A++ + GC P TY+ ++ GLC GR +EA
Sbjct: 614 LPNAHTYTSLIYGLCQEGKVDAAER----LTENGCEPTIDTYSTLVSGLCREGRSNEASQ 669
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L+ M+ G ++ + S+L C K D A+ + P + Y+V+I C
Sbjct: 670 LVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALC 729
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ +++EA+++ + + + + + + L++ G+ D + L M +C P+
Sbjct: 730 GVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLH 789
Query: 403 SY 404
+Y
Sbjct: 790 TY 791
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 157/306 (51%), Gaps = 19/306 (6%)
Query: 84 NPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYG------DRG 137
+PN++ YTA+ D I +A SL + ++ + S I+ Y +G
Sbjct: 509 SPNQW-----TYTAMIDGYCKEGKIDVALSLFE---RMEENGCSASIETYNAIISGLSKG 560
Query: 138 NVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
N + F AK E G +Y SL+ L + + LA + FH++ K+N +P +
Sbjct: 561 NRFSEAEKF-CAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLP-NAH 618
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
TYT++I G C+ G ++ A+++ + +P + Y+T+++G C++G EA + + M +
Sbjct: 619 TYTSLIYGLCQEGKVDAAERLTE-NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEK 677
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G P+ Y +++ C + +VD A + M + GF+ ++ +K ++ LC V + ++A
Sbjct: 678 GLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEA 737
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ +++++ N D+ + V+++G + G SD + L M +R P++ ++ + R
Sbjct: 738 LNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARE 797
Query: 376 LVENGE 381
L + G+
Sbjct: 798 LSKVGK 803
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 190/358 (53%), Gaps = 6/358 (1%)
Query: 110 IAASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
AA + + SD ++ S LI AY + G ++ AI + ++ + + +L L
Sbjct: 39 FAAIVETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHL 98
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPN 225
+++ KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P+
Sbjct: 99 MKLKYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 157
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+++YNT++NG+ + G+L+E + + M+ G +P+ TY+ +I GLC ++D+A L
Sbjct: 158 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 217
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M + G N T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G
Sbjct: 218 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 277
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+A L+ EM + LKP ++ + + G+LD A K+M Q + + V+Y
Sbjct: 278 DLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYT 337
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 338 ALISGLC-QEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEM 394
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 159/291 (54%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F + + SYN+L+ +R+ L E F
Sbjct: 124 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD--LDEGFRLK 181
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK +++A ++FD M VK PN + + T+I+G CK
Sbjct: 182 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M + K + T+
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITY 301
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G D A + + +++ N+ D +Y +I+G C+ G+S +A +L+EM
Sbjct: 302 TTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLN 361
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GLKP ++ + + G++ + LLK+M + +P+ V+YN ++ G
Sbjct: 362 VGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 150/319 (47%), Gaps = 17/319 (5%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVK-ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
SL+ V+V A F IV+ + D+ ++ +I Y + G + +A + + +
Sbjct: 20 KSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLT 79
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKC---------MNEMMNRGCRPNELTYNAMIYGL 271
+ ++T C+K LE K E++ G + +N +++
Sbjct: 80 REHKFWVPFDT-----CRK-VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRF 133
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +G + A+ + + G + +V ++ +++ G +G D+ ++ + + PDV
Sbjct: 134 CKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDV 193
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y V+ING CK K D+A L EM +GL P +F + +NG +D A+ + KQ
Sbjct: 194 YTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQ 253
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M P+ ++YNT+I GLC KG ++ L+D M D Y+ L+ G C+EG
Sbjct: 254 MLSQSLSPDLITYNTLIYGLC-KKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEG 312
Query: 452 NVENVMQIAHEMVTKKGRL 470
++++ + M+ + RL
Sbjct: 313 DLDSAFEHRKRMIQENIRL 331
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 19/257 (7%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNR-----------------GCRPNEL-TYNAMIY 269
+Y TMI+ C + L EAK + +++R G + ++L ++ +I
Sbjct: 2 SYCTMIHFLCTQQMLSEAKSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLIT 61
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
+G + +A R + F T + +L+ L + F G+ ++E
Sbjct: 62 AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+ + ++++ FCK G A S+ + GL+P+V S+N + + G+LD L
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 181
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
M P+ +Y+ +I GLC + +M D +L D M+ G + ++ L+ G+C+
Sbjct: 182 SAMLASGVQPDVYTYSVLINGLC-KESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 450 EGNVENVMQIAHEMVTK 466
G V+ M+I +M+++
Sbjct: 241 NGRVDLAMEIYKQMLSQ 257
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 199/407 (48%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSH-------SLISI--------------AASLLKNSNK 120
P + + HT Y + L +H SLI I AA L +
Sbjct: 3 QPGNSTFRHTLHSYCTMIHFLSTHQRILEAKSLIQIVVSRKGKDSASAVFAAILETKGAQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI F ++ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P+++++NT+ING+
Sbjct: 123 FYKEIL-ECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ G+L++ + M G P+ T +I GLC ++DEA L +M G N
Sbjct: 182 IRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +PD+ +Y +I G C+ G +A L+ E
Sbjct: 242 VTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A L K+M + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ G+C++G+V+ ++ EM
Sbjct: 361 RAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEM 407
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 150/285 (52%), Gaps = 4/285 (1%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
S +F + L+ + G ++ A F + + S+N+L+ +R+ +
Sbjct: 135 SLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRL- 193
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
+ + V PDV T T +I G CK ++ A ++F+ M K PN + + T+I+G CK
Sbjct: 194 KTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCK 253
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G ++ A + +M+ +G P+ +TYN +IYGLC G + +A+ L+ +M + G K + T
Sbjct: 254 SGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKIT 313
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ G C G + A + ++E ++ D +Y +I+G C+ G++ +A +L+EM
Sbjct: 314 YTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREML 373
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+ GLKP ++ + + G++ A LLK+M + +P V+
Sbjct: 374 SVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCVVT 418
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 166/294 (56%), Gaps = 5/294 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+++++ L + + A E +++ V PDV TYTT++ G+C ++ A KVFD+M
Sbjct: 269 FSTVVDALCKEGKVTEAHEIVDMMIQRGV-EPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 327
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K P++++Y T+ING+CK ++++A EM + P+ TYN +++GLC GR+
Sbjct: 328 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRL 387
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A L +M G ++ T+ +L LC ++A+ L+ + +N+NPD++ Y ++
Sbjct: 388 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNII 447
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G C+ G+ + A L + ++GL P+V+++N + L + G L+ A L +M DC
Sbjct: 448 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 507
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
P+ +YNTI G ++ ++ L++ M+ G + D + + L++ ++G
Sbjct: 508 SPDGCTYNTIARGFLQNNETLRAIQ-LLEEMLARGFSADVSTTTLLVEMLSDDG 560
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 175/341 (51%), Gaps = 11/341 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI GN AAI + +E G C + Y S++ L + + A F Q+V
Sbjct: 167 LINGLCKVGNTSAAI---RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 223
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ + PD+ TYT+++ C + ++ + + M + P+++ ++T+++ CK+G++
Sbjct: 224 GQGI-SPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKV 282
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA + ++ M+ RG P+ +TY ++ G C+ +DEA + M GF +V ++ ++
Sbjct: 283 TEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTL 342
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G C + K D+A+ + PD K+Y +++G C +G+ +AI+L EM ARG
Sbjct: 343 INGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQ 402
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P + +++ + L +N L+ A+ LLK + + P+ YN II G+C A G ++
Sbjct: 403 MPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRA-GELEAAR 461
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
DL + G + Y+ ++ G C+ G + ++ EM
Sbjct: 462 DLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 502
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 156/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ N L+ +N + A +I+K PD +T+TT+IRG C G I A +F
Sbjct: 91 VYTLNILINSFCHLNRVGFAFSVLAKILKLGH-QPDPTTFTTLIRGLCVEGKIGEALHLF 149
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +PN++ Y T+ING CK G A + + M C+P+ + Y ++I LC +
Sbjct: 150 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 209
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+V EA L ++M G ++ T+ S++ LC + ++ L ++ + + PDV +
Sbjct: 210 RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 269
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V++ CK GK EA ++ M RG++P V ++ + E+D A+ + M +
Sbjct: 270 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 329
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ +SY T+I G C ++ L + M R D Y+ L+ G C G ++
Sbjct: 330 KGFAPDVISYTTLINGYCKIH-KIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQ 388
Query: 455 NVMQIAHEMVTK 466
+ + + HEMV +
Sbjct: 389 DAIALFHEMVAR 400
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 146/281 (51%), Gaps = 5/281 (1%)
Query: 191 PPDVSTYTTMIRGYCKM---GMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK 247
PP + + ++ KM + + D V PN+ N +IN FC + A
Sbjct: 53 PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFS 112
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ +++ G +P+ T+ +I GLC+ G++ EA L KM GF+ NV T+ +++ GLC
Sbjct: 113 VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 172
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
VG A+ LR++ + N PDV Y +I+ CK + EA +L +M +G+ P +F
Sbjct: 173 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 232
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++ ++ L E LL QM LP+ V ++T++ LC +G++ + ++VD
Sbjct: 233 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC-KEGKVTEAHEIVDM 291
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
MI+ G D Y+ L+ G+C + ++ +++ +M+ +KG
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV-FDMMVRKG 331
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF--- 217
YN ++ + R ++ A + F + + + P V TY MI G CK G++ A K+F
Sbjct: 444 YNIIIDGMCRAGELEAARDLFSNLSSKGL-HPSVWTYNIMIHGLCKRGLLNEANKLFMEM 502
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
D P+ YNT+ GF + E A + + EM+ RG + T ++ L +G
Sbjct: 503 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLD 562
Query: 278 DEAKMLM 284
+ LM
Sbjct: 563 QSSCFLM 569
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 167/309 (54%), Gaps = 5/309 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++N L+ L + I A+ + K PD+ TY ++ GYC + A+++F+
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M ++P++L YN +I+G+CK ++EA E+ N+ P +YN++I GLC +G
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R+ K L+ +M + +V T+ ++ LC G+ +A+G L +M+ + P++ +Y
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++G+C + A + M GL+P + ++N + + +D AI+L K+M
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ +P+ SYN++I GLC GR+ V++L+D M SG + D Y+ LL +C+ +
Sbjct: 505 NLIPDIASYNSLIDGLCNL-GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDK 563
Query: 456 VMQIAHEMV 464
+ + ++V
Sbjct: 564 AISLFRQIV 572
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 189/389 (48%), Gaps = 15/389 (3%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLI----SIAASLLKNSNKLSDFFISKLIKAYGDRG 137
N +P+ Y + + D L I + A + K K + L++ Y R
Sbjct: 260 NVDPDDY-----TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRE 314
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
NV A F++ + + +YN L+ + + A F ++ +N+VP +++Y
Sbjct: 315 NVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVP-TIASY 373
Query: 198 TTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
++I G C G I + KK+ D M P+++ YN +I+ CK+G + EA + MM
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G +PN +TYNAM+ G C+ V+ AK + +M +G + ++ + ++ G C D+
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+ + + N+ PD+ SY +I+G C +G+ LL EM G P V ++N +
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+ D+AI L +Q+ + P+F + + I+ LC + +++ ED + ++ G +
Sbjct: 554 AFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGE-KLKMAEDALKHLLMHGCS 611
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ Y+ L+ C++G+ M + +M
Sbjct: 612 PNVQTYTILINALCKDGSFGEAMLLLSKM 640
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 194/384 (50%), Gaps = 19/384 (4%)
Query: 86 NKYHHTTPCYTAITDVLLSHSLIS-IAASLLKNSNKLSDFFISKLI-KAYGDRGNVKAAI 143
N Y H + +TA LL+ L S +L+ + ++ F I+ +I KA N+ A
Sbjct: 98 NCYFHQS--HTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155
Query: 144 FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
+ F Q ++Y +L+ L + IK A ++ K +V P++ Y+ +I G
Sbjct: 156 YLFDQ----------FTYGTLINGLSKNGQIKAALHLLQEMEKSSV-QPNLVMYSALIDG 204
Query: 204 YCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
CK G + +A + + + LL YN++I+G C G +E + + +M+ P+
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+ T+N +I LC GR+ EA+ ++A M G K ++ T+ ++++G C +A
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+++ + PDV +Y V+I+G+CK DEA+ L KE+ + L PT+ S+N++ L +G
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+ LL +M P+ V+YN +I LC +GR+ + ++ M++ G + Y
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALC-KEGRILEALGVLVMMMKKGVKPNIVTY 443
Query: 441 SCLLKGYCEEGNVENVMQIAHEMV 464
+ ++ GYC NV I + MV
Sbjct: 444 NAMMDGYCLRNNVNVAKDIFNRMV 467
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 143/279 (51%), Gaps = 5/279 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCM 249
D TY T+I G K G I+ A + M +V+PNL+ Y+ +I+G CK G + +A
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+++ RG + +TYN++I G C GR E L+ KM + T ++ LC
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G+ +A G L + + PD+ +Y ++ G+C EA L M RGL+P V ++
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + + +D A++L K++ + +P SYN++I GLC + GR+ V+ L+D M
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNS-GRISHVKKLLDEMH 397
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
S D Y+ L+ C+EG + + + M+ KKG
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVL-VMMMKKG 435
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 163/332 (49%), Gaps = 5/332 (1%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
NV A+ F++ ++ ++ LLG +VR+ A F Q+ + + P ++T+
Sbjct: 35 NVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGI-SPSIATF 93
Query: 198 TTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T +I Y A + + +PNL+ +NT+INGFC G + +A ++
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G ++ TY +I GL NG++ A L+ +M + + N+ + +++ GLC G
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+G + E + D +Y +I+G C +G+ E LL +M + P ++FN +
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L + G + A +L M + P+ V+YN ++ G C ++ + + +L +RM++ G
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYC-SRENVHEARELFNRMVKRGLE 332
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ L+ GYC+ V+ M + E+ K
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK 364
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 153/341 (44%), Gaps = 39/341 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y V A+ F + + SYNSL+ L I ++ ++ +
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM-HGS 399
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
PPDV TY +I CK G I A V +M VKPN++ YN M++G+C + + A
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K N M+ G P+ L YN +I G C VDEA +L +MR +++++ S++ G
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL------------ 353
LC +G+ L + ++ +PDV +Y ++++ FCK D+AISL
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDF 579
Query: 354 ----------------------LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
LK + G P V ++ + L ++G A+LLL +
Sbjct: 580 YTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSK 639
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
M D P+ +++ II G+ + + E L + MI G
Sbjct: 640 MEDNDRPPDAITFEIII-GVLLQRNETDKAEKLREEMIARG 679
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 121/242 (50%), Gaps = 38/242 (15%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YN+++ N++ +A++ F+++VK + PD+ Y +I GYCK M++ A +F
Sbjct: 440 IVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL-EPDILNYNVLINGYCKTEMVDEAIVLF 498
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P++ +YN++I+G C G + ++ ++EM + G P+ +TYN ++ C
Sbjct: 499 KEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKT 558
Query: 275 GRVDEA-----------------------------KMLMAK-----MRLNGFKDNVSTHK 300
D+A K+ MA+ + ++G NV T+
Sbjct: 559 QPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYT 618
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ LC G F +A+ L + + + PD ++E++I + ++D+A L +EM AR
Sbjct: 619 ILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIAR 678
Query: 361 GL 362
GL
Sbjct: 679 GL 680
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 1/157 (0%)
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C D AV ++ P ++ ++ ++G AISL +++++G+ P++
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+F + A LL + + PN V++NTII G C+ G + D
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCI-NGMIFKALDFCQ 149
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ G+ D Y L+ G + G ++ + + EM
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 161/301 (53%), Gaps = 6/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ Y +++ L + + AE F +I+K V D T+++ G+C+ + +A KVF
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVL-DSHIGTSLLLGFCRGLNLRDALKVF 253
Query: 218 DVM----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
DVM T PN ++Y+ +I+G C+ G LEEA ++M +GC+P+ TY +I LC
Sbjct: 254 DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD 313
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G +D+A L +M G K NV T+ ++ GLC GK ++A G R +++ + P V +
Sbjct: 314 RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVIT 373
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +ING+CK G+ A LL M R KP V +FN + L G+ +A+ LLK+M
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
P+ VSYN +I GLC +G M L+ M D ++ ++ +C++G
Sbjct: 434 DNGLSPDIVSYNVLIDGLC-REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 454 E 454
+
Sbjct: 493 D 493
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 163/315 (51%), Gaps = 14/315 (4%)
Query: 136 RG-NVKAAIFWFH-QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FHQIVKENVVPP 192
RG N++ A+ F +K++ SY+ L+ L V +L E F + E P
Sbjct: 242 RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVG--RLEEAFGLKDQMGEKGCQP 299
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
TYT +I+ C G+I+ A +FD M KPN+ Y +I+G C+ G++EEA
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M+ P+ +TYNA+I G C +GRV A L+ M K NV T +++GLC V
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
GK +AV L+ +++ ++PD+ SY V+I+G C+ G + A LL M ++P +F
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD----VEDLV 425
A+ + G+ D A L M + + V+ T+I G+C G+ +D +E LV
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKV-GKTRDALFILETLV 538
Query: 426 D-RMIRSGHNLDFTM 439
R++ + H+L+ +
Sbjct: 539 KMRILTTPHSLNVIL 553
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 172/376 (45%), Gaps = 40/376 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIKA DRG + A F + +++Y L+ L R I+ A ++VK+
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------------------- 221
+ P V TY +I GYCK G + A ++ VM
Sbjct: 367 IFPS-VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 222 -----------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+ P++++YN +I+G C++G + A K ++ M P+ LT+ A+I
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C G+ D A + M G + T +++ G+C VGK A+ L +++ +
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
S V+++ K K E +++L ++ GL P+V ++ + L+ +G++ + +L+
Sbjct: 546 PHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILE 605
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
M CLPN Y II GLC GR+++ E L+ M SG + + Y+ ++KGY
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQF-GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 451 GNVENVMQIAHEMVTK 466
G ++ ++ MV +
Sbjct: 665 GKLDRALETVRAMVER 680
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 154/336 (45%), Gaps = 45/336 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI Y G V A F +E AC + ++N L+ L RV A +++
Sbjct: 377 LINGYCKDGRVVPA---FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+N + PD+ +Y +I G C+ G + A K+ M ++P+ L + +IN FCK+G+
Sbjct: 434 -DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM---AKMR-------LN-- 290
+ A + M+ +G +E+T +I G+C G+ +A ++ KMR LN
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 291 -----------------------GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
G +V T+ +++ GL G + L + +
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P+V Y ++ING C+ G+ +EA LL M+ G+ P ++ + + V NG+LDRA+
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
++ M + N Y++++ G +++ + + E+
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 158/368 (42%), Gaps = 60/368 (16%)
Query: 157 CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
CL ++ +++ + +A F ++++ + +V T TT+I G CK+G +A +
Sbjct: 476 CL-TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV-TGTTLIDGVCKVGKTRDALFI 533
Query: 217 FDVMT--------------------------------------VKPNLLAYNTMINGFCK 238
+ + + P+++ Y T+++G +
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G++ + + + M GC PN Y +I GLC GRV+EA+ L++ M+ +G N T
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC--KIGKSDEAISLLKE 356
+ M+KG GK D+A+ +R ++E + + Y ++ GF + G + S + +
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSD 713
Query: 357 MRARGLKPTVF--------------SFNAVFRI--LVENGELDRAILLLKQMPQMDCLPN 400
+ R P S +F + L + G D + L++ + +
Sbjct: 714 IALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE 773
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+ + I+ C K + +E L+ +++SG F + +++G +EG+ E ++
Sbjct: 774 -KAMDIIMESYCSKKKHTKCME-LITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELV 831
Query: 461 HEMVTKKG 468
E++T G
Sbjct: 832 MELLTSNG 839
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 84/208 (40%), Gaps = 39/208 (18%)
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+ Y ++ LC NG + A+M M+K+ GF + S+L G C A+ +
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF-D 254
Query: 322 VM--EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
VM E P+ SY ++I+G C++
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEV----------------------------------- 279
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
G L+ A L QM + C P+ +Y +I LC +G + +L D MI G +
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC-DRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTKK 467
Y+ L+ G C +G +E + +MV +
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 12/182 (6%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD-----VKSYEVVINGFCKIG 345
GF+ N + S+L L K D +G+L V M D + Y ++N CK G
Sbjct: 155 GFRLNYPCYSSLLMSL---AKLD--LGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNG 209
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP-QMDCLPNFVSY 404
++ A + ++ G ++ L A+ + M ++ C PN VSY
Sbjct: 210 YTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSY 269
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ +I GLC GR+++ L D+M G Y+ L+K C+ G ++ + EM+
Sbjct: 270 SILIHGLCEV-GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 465 TK 466
+
Sbjct: 329 PR 330
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 203/415 (48%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK----------------- 116
FF W S+P + + HT Y + L +H ++ A +L++
Sbjct: 1 FFTWLSSPTNST--FRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAA 58
Query: 117 ----NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ SD ++ S +I AY + G ++ AI + K+ + + +L L+++
Sbjct: 59 ILETKGTQRSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKL 118
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F+ + + E P + + ++ +CK G I A+ VFD +T ++P++++
Sbjct: 119 KYFKLVWGFYEESL-ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVS 177
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
+NT++NG+ K G+L E + M G +P+ TY+ +I GLC ++D+ L +M
Sbjct: 178 FNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEML 237
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G N T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G
Sbjct: 238 DXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLK 297
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLKP ++ + + G+L+ A +M + + + V+Y +I
Sbjct: 298 QAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALI 357
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 358 SGLC-QEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEM 411
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 173/343 (50%), Gaps = 13/343 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK-- 186
+I A D+G V + + A + SYN++L L EE ++VK
Sbjct: 192 VINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVH 251
Query: 187 -------ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
++ PD+ Y T+I G CK G E A ++ M +KPN++ YNT++ G
Sbjct: 252 EALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGI 311
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C E+A++ + EM + C +++T+N ++ C NG VD L+ +M +G +V
Sbjct: 312 CSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDV 371
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ +++ G C G D+AV L+N+ P+ SY +V+ G C + +A L+
Sbjct: 372 ITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSR 431
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +G P +FN + L + G +++AI LLKQM C P+ +SY+T+I GL A G
Sbjct: 432 MIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKA-G 490
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ ++ +L++ MI G + YS + EG ++ V+Q+
Sbjct: 491 KTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQM 533
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 173/323 (53%), Gaps = 11/323 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN++L + + + AEE ++ ++N P D T+ ++ +C+ G+++ ++ + M
Sbjct: 304 YNTVLKGICSADRWEKAEELLTEMYQKNC-PLDDVTFNILVDFFCQNGLVDRVIELLEQM 362
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
P+++ Y T+INGFCK+G ++EA + M + GC+PN ++Y ++ GLC R
Sbjct: 363 LEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERW 422
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A+ LM++M G N T +++ LC G +QA+ L+ ++ NPD+ SY V
Sbjct: 423 VDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTV 482
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K GK++EA+ LL M +G+ P V +++++ L G +D+ I + +
Sbjct: 483 IDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATI 542
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVE-DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+ V YN +I LC K R D+ D + M+ +G + + Y+ L+KG EG +
Sbjct: 543 RSDAVLYNAVISSLC--KRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEA 600
Query: 457 MQIAHEMVTKKGRLLKLKNFLTR 479
+ E+ +++ ++ LTR
Sbjct: 601 QDLLSELCSRRA----VRKHLTR 619
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 167/351 (47%), Gaps = 21/351 (5%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+S LI++ G A+ A N A + YN+++ RV ++ A +
Sbjct: 55 LSALIRSLCVAGRTADAVRALDAAG---NAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP 111
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
VPP+ TY ++RG C G I +A V D MT + P Y+ +I C+ G
Sbjct: 112 ----VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGY 167
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
A + + + +G + N +I +C G VDE ++ K+ L G + ++ ++ ++
Sbjct: 168 SSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAV 227
Query: 303 LKGLCVV---GKFDQAVGYLRNVMEA-------NMNPDVKSYEVVINGFCKIGKSDEAIS 352
LKGLC G ++ + + V EA PD++ Y +I+G CK G + A
Sbjct: 228 LKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANE 287
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+L M + GLKP V +N V + + ++A LL +M Q +C + V++N ++ C
Sbjct: 288 ILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFC 347
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + V +L+++M+ G D Y+ ++ G+C+EG ++ + + M
Sbjct: 348 Q-NGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNM 397
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 14/279 (5%)
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+ +IR C G +A + D ++ YN M+ G+C+ G++E A++ +
Sbjct: 56 SALIRSLCVAGRTADAVRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAV---PV 112
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
PN TY ++ GLC GR+ +A ++ +M + +++ C G + A+
Sbjct: 113 PPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALR 172
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL- 376
L + D + +VIN C G DE + +L+++ G + + S+NAV + L
Sbjct: 173 VLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLC 232
Query: 377 -------VEN--GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
VE E+ + L QM Q C P+ Y TII G+C +G + +++ R
Sbjct: 233 AAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGIC-KEGHHEVANEILSR 291
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M G + Y+ +LKG C E ++ EM K
Sbjct: 292 MPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQK 330
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 204/407 (50%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y ++ L +H +I A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCSMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAEILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 TSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A+ K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 204/407 (50%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A SL++ +
Sbjct: 3 SPTNSTFRHTLHSYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI +F ++ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + ++ +CK G + A+ VFD +T ++P+++++NT+++G+
Sbjct: 123 FYKEIL-ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ G+L+E + + M G +P+ TY+ +I GLC ++DEA L +M NG N
Sbjct: 182 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M + LKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G D Y+ ++ +C++G+V+ ++ EM
Sbjct: 361 RSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEM 407
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 204/410 (49%), Gaps = 29/410 (7%)
Query: 79 SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------N 117
S P + N+ HT Y + +L +H ++ A SL++
Sbjct: 2 SYPGNSSNR--HTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETK 59
Query: 118 SNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKL 176
+ SDF++ S L+ AY + G V+ A+ F KQ + + +L L+ KL
Sbjct: 60 GTQRSDFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKL 119
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
+F+ +++ E P + + +++ +CK G + A+ VFD +T ++P+++++NT+I
Sbjct: 120 VWDFYKEVL-ECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLI 178
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
NG+ K G+L+E + + M G +P+ TY+ +I GLC G++DEA L +M NG
Sbjct: 179 NGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLV 238
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
N T +++ G C K D A+ + ++ ++PD+ +Y +I G CK G+ + L
Sbjct: 239 PNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDL 298
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
+ EM GLKP S+ + + G+L+ A+ L +M Q + V+Y +I LC
Sbjct: 299 IDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLC- 357
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+GR D E ++ M+ G D Y+ ++ +C++ + + ++ EM
Sbjct: 358 REGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREM 407
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 182/395 (46%), Gaps = 10/395 (2%)
Query: 66 TNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA----ASLLKNSNKL 121
+ P A+ FN A++ P T+ Y + D +A LL+ ++
Sbjct: 51 SGPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRV 110
Query: 122 SDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
S L+K + + A+ H+ ++ ++SYN LL L A+
Sbjct: 111 DAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNL 170
Query: 181 FHQIVKENVV-PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
+ + V PDV Y T+I G+ K G + A +F M + P+L+ YN++++
Sbjct: 171 LRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHAL 230
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
CK +++A+ + +M+N+ PN TYN +IYG G+ EA + +MR + +V
Sbjct: 231 CKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 290
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T ++ LC GK +A + NPDV SY +++NG+ G + L
Sbjct: 291 VTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDL 350
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M G+ P ++FN + G LD+A+++ +M P+ V+Y T+I LC G
Sbjct: 351 MLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI-G 409
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+M D + ++MI G D Y+CL++G+C G
Sbjct: 410 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 444
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 150/311 (48%), Gaps = 8/311 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+Y L+ R + +LA FF Q+++ + D + +++G+C+ + A +
Sbjct: 78 YTYAILMDCCTRAHRPELALAFFGQLLRTGL-RVDAIIASHLLKGFCEAKRTDEALDILL 136
Query: 219 VMTVK----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG--CRPNELTYNAMIYGLC 272
T + P++ +YN ++ C +G+ +A + M G C P+ + YN +I G
Sbjct: 137 HRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFF 196
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G V++A L +M G ++ T+ S++ LC D+A +LR ++ + P+
Sbjct: 197 KEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNW 256
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y +I G+ G+ EA+ + KEMR + P V + + + L + G++ A + M
Sbjct: 257 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 316
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
P+ SYN ++ G KG + D+ DL D M+ G DF ++ +K Y G
Sbjct: 317 AMKGQNPDVFSYNIMLNGYA-TKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGM 375
Query: 453 VENVMQIAHEM 463
++ M I +EM
Sbjct: 376 LDKAMIIFNEM 386
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 4/257 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I + G+V A F + Q L +YNS++ L + ++ AE F Q+V +
Sbjct: 191 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 250
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
V+P + TY +I GY G + A +VF M ++ P+++ + ++ CK G+++EA
Sbjct: 251 VLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 309
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + M +G P+ +YN M+ G G + + L M +G + T +K
Sbjct: 310 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKA 369
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
G D+A+ + + + PDV +Y VI C+IGK D+A+ +M +G+ P
Sbjct: 370 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 429
Query: 366 VFSFNAVFRILVENGEL 382
+++N + + +G L
Sbjct: 430 KYAYNCLIQGFCTHGIL 446
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++P +Y ++++ + + + A++ ++ GL+ + + + E D A+
Sbjct: 73 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 132
Query: 387 -LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL---DFTMYSC 442
+LL + P++ C+P+ SYN ++ LC +G+ ++L+ RM+ G + D Y+
Sbjct: 133 DILLHRTPELGCVPDVFSYNILLKSLC-NQGKSGQADNLL-RMMAEGGTVCSPDVVAYNT 190
Query: 443 LLKGYCEEGNVENVMQIAHEMVTK 466
++ G+ +EG+V + EMV +
Sbjct: 191 VIDGFFKEGDVNKACDLFKEMVQR 214
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 162/314 (51%), Gaps = 9/314 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +++ + + A E ++ KE V DV ++T+I+G C+ G I+ A + F M
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEM-KERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60
Query: 221 --TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR-----GCRPNELTYNAMIYGLCI 273
PN++ YNT++NG CK ++E + ++M R GC P+ ++Y+ +I LC
Sbjct: 61 GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
RVD+A +MR G NV T+ S++ GLC V + D+A L + +M P
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y V+NGF + GK E + LL M+ +G + FNA+ L +N E ++A +++
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ PN V+YN + GLC A G++ + ++ M+ S D YS ++ G+C+ G +
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKA-GKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299
Query: 454 ENVMQIAHEMVTKK 467
+ + M+ +
Sbjct: 300 DKADDVFTRMMVHE 313
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 184/384 (47%), Gaps = 13/384 (3%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT + + + A LL + K+ S LI+ +G + A+ F
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE----NVVPPDVSTYTTMIRGYCK 206
+ E + +YN+++ L + N I E F + K + PDV +Y+T+I CK
Sbjct: 62 E-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 207 MGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
++ A + F M PN++ Y+++I+G CK ++EA + ++ P +
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YNA++ G G+ E L+ M+ GF N+ +ML L + ++A + ++
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
++ P+V +Y V ++G CK GK DEA +L EM + P V +++++ + G +D
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+A + +M +C+P+ V++ T++ G K + ++ + + M+ +G Y+ L
Sbjct: 301 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHK-KSREAFRVHEDMVNAGFIPGLQTYNVL 359
Query: 444 LKGYCEEGNVENVMQIAHEMVTKK 467
+ C +VE+ ++I H+M KK
Sbjct: 360 MDCVCGADSVESALEIYHKMKRKK 383
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 141/278 (50%), Gaps = 25/278 (8%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN + L + + A ++V E+ V PDV TY+++I G+CK G ++ A VF
Sbjct: 250 TYNVAVHGLCKAGKVDEAYRILLEMV-ESKVTPDVITYSSIIDGFCKAGRMDKADDVFTR 308
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+ + + T+++GF + + EA + +M+N G P TYN ++ +C
Sbjct: 309 MMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADS 368
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPD----- 330
V+ A + KM+ + + +T+ +++ LC + D+A +L +VMEA N+ P+
Sbjct: 369 VESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFL-DVMEADNVVPNGAICH 427
Query: 331 ------VKSYEV-----VING---FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
K EV V++ CK G+ DEA+ ++++M +G++P ++ AV R L
Sbjct: 428 ALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSL 487
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
+D AI ++M C P V+Y +I C A
Sbjct: 488 CGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSA 525
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 169/379 (44%), Gaps = 25/379 (6%)
Query: 95 YTAITDVLLSHSLISIAASLL---KNSNKL-SDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+++ D L + A SLL K + + + + ++ + +G + K
Sbjct: 146 YSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMK 205
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ G + +N++L L + + + A +FF +++K P+V TY + G CK G +
Sbjct: 206 EKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGK-KPNVVTYNVAVHGLCKAGKV 264
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A ++ M V P+++ Y+++I+GFCK G +++A MM C P+ +T+ +
Sbjct: 265 DEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTL 324
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
++G + + EA + M GF + T+ ++ +C + A+ +
Sbjct: 325 LHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKR 384
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD +Y +I C+ + DEA L M A + P +A+ +L + GE+D A
Sbjct: 385 QPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACS 444
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+L + + +C A G + +++++M+ G D Y +L+
Sbjct: 445 VLDNVVE----------------ICKA-GEPDEAVEVIEQMVLKGVRPDEATYVAVLRSL 487
Query: 448 CEEGNVENVMQIAHEMVTK 466
C V++ + +M ++
Sbjct: 488 CGLDRVDSAIAEFEKMASR 506
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 164/341 (48%), Gaps = 5/341 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I A V A +F + + + + +Y+SL+ L +V+ + A Q+
Sbjct: 112 STVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKG 171
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELE 243
E++VP + Y ++ G+ + G ++ M K N++ +N M++ K E E
Sbjct: 172 EDMVPRAM-YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQE 230
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + ++ G +PN +TYN ++GLC G+VDEA ++ +M + +V T+ S++
Sbjct: 231 KACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSII 290
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C G+ D+A +M P ++ +++GF + KS EA + ++M G
Sbjct: 291 DGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFI 350
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + ++N + + ++ A+ + +M + P+ +Y +I LC A+ R+ + ++
Sbjct: 351 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRAR-RVDEAKE 409
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+D M + + L++ C++G V+ + +V
Sbjct: 410 FLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVV 450
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 113/237 (47%), Gaps = 23/237 (9%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN L+ + +S++ A E +H++ K PD +TY +I+ C+ ++ AK+
Sbjct: 353 LQTYNVLMDCVCGADSVESALEIYHKM-KRKKRQPDANTYAPLIQCLCRARRVDEAKEFL 411
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
DVM V PN + ++ CK+GE++EA ++ ++ +C
Sbjct: 412 DVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE----------------ICKA 455
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G DEA ++ +M L G + + +T+ ++L+ LC + + D A+ + P + +Y
Sbjct: 456 GEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTY 515
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
++I C +D+A + + M A G P + + L + G D LL++Q
Sbjct: 516 TLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD---LLVRQ 569
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 201/384 (52%), Gaps = 11/384 (2%)
Query: 89 HHTTPCYTAITDVLLSH----SLISIAASLLKNSNKL-SDFFI-SKLIKAYGDRGNVKAA 142
H P ++ V++S S ++ A++L+ L SD ++ S LI AY + G ++ A
Sbjct: 18 HQMLPEAKSLIQVVVSRKGKGSASAVFAAILETKGTLRSDIYVFSGLITAYLESGFLRDA 77
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
I + ++ + + +L L+++ KL F+ +I+ E P + + ++
Sbjct: 78 IECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEIL-ECGYPASLYFFNILMH 136
Query: 203 GYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
+CK G I A+ VFD +T ++P+++++NT++NG+ + G+L+E + + M G P
Sbjct: 137 RFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEP 196
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ TY+ +I GLC ++D A L +M G N T +++ G C G+ D A+
Sbjct: 197 DVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 256
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ ++ +++ D+ +Y +I G CK G +A +L+ EMR +GLKP ++ + +
Sbjct: 257 KQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKE 316
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
G+L+ A K+M Q + + V Y T+I GLC +GR D E ++ M+ G D
Sbjct: 317 GDLETAFEHRKRMIQENIRLDDVVYTTLISGLC-QEGRSVDAEKMLREMLSVGLKPDTGT 375
Query: 440 YSCLLKGYCEEGNVENVMQIAHEM 463
Y+ ++ +C++G+V ++ EM
Sbjct: 376 YTMIINEFCKKGDVWTGSKLLKEM 399
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 153/286 (53%), Gaps = 6/286 (2%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF- 180
S +F + L+ + G ++ A F + + S+N+L+ +R+ L E F
Sbjct: 127 SLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGD--LDEGFR 184
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFC 237
+ + V PDV TY+ +I G CK I+ A ++FD M K PN + + T+I+G C
Sbjct: 185 LKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHC 244
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G ++ A + +M+++ + +TYN +IYGLC G + +A+ L+ +MR+ G K +
Sbjct: 245 KNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKI 304
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ G C G + A + + +++ N+ D Y +I+G C+ G+S +A +L+EM
Sbjct: 305 TYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREM 364
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+ GLKP ++ + + G++ LLK+M + +P+ V+
Sbjct: 365 LSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 117/262 (44%), Gaps = 19/262 (7%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR------------------GCRPNELTY 264
+ L +Y TMI+ C L EAK + +++R R + +
Sbjct: 2 RHTLYSYCTMIHFLCTHQMLPEAKSLIQVVVSRKGKGSASAVFAAILETKGTLRSDIYVF 61
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+ +I +G + +A R + F T K +L+ L + F G+ + ++E
Sbjct: 62 SGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEILE 121
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ + ++++ FCK G+ A S+ + GL+P+V SFN + + G+LD
Sbjct: 122 CGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDE 181
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
L M P+ +Y+ +I GLC + ++ +L D M+ G + ++ L+
Sbjct: 182 GFRLKSAMHASGVEPDVYTYSVLINGLC-KESKIDGANELFDEMLDKGLVPNGVTFTTLI 240
Query: 445 KGYCEEGNVENVMQIAHEMVTK 466
G+C+ G V+ M+I +M+++
Sbjct: 241 DGHCKNGRVDLAMEIYKQMLSQ 262
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 164/303 (54%), Gaps = 5/303 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+L+G L R + + Q+V P D+ Y T++ G CK G +E A ++ D
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVDHGCTP-DIRMYATVLDGVCKEGHLEVAHEILDR 320
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KPN++ YNT++ G C E+A++ + EM + C +++T+N ++ C NG
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGL 380
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V L+ +M +G +V T+ +++ G C G D+AV L+++ P+ SY +
Sbjct: 381 VYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTI 440
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
V+ G C + +A L+ +M +G P +FN V L + G +++AI LLKQM
Sbjct: 441 VLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNG 500
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C P+ +SY+T+I GL A G+ + +L++ M+ G + + +YS + +EG + V
Sbjct: 501 CSPDLISYSTVIDGLGKA-GKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRV 559
Query: 457 MQI 459
+Q+
Sbjct: 560 IQM 562
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 163/310 (52%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN++L L ++ ++V+ PP+V T+ T+I C+ G+ E +V
Sbjct: 227 SYNAVLKGLCMAKRWGRVQDLMEEMVRVGC-PPNVVTFNTLIGYLCRNGLFERVHQVLAQ 285
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P++ Y T+++G CK+G LE A + ++ M + G +PN + YN ++ GLC R
Sbjct: 286 MVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAER 345
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++A+ L+A+M N + T ++ C G + + L ++E PDV +Y
Sbjct: 346 WEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTT 405
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VINGFCK G DEA+ LLK M A G +P S+ V + L A L+ QM +
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQG 465
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C PN V++NT+I LC KG ++ +L+ +M+ +G + D YS ++ G + G +
Sbjct: 466 CSPNPVTFNTVINFLC-KKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEA 524
Query: 457 MQIAHEMVTK 466
+++ + MV K
Sbjct: 525 LELLNVMVNK 534
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 171/321 (53%), Gaps = 8/321 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN++L L + AEE ++ +N P D T+ ++ +C+ G++ ++ + M
Sbjct: 333 YNTVLKGLCSAERWEQAEELLAEMF-DNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQM 391
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
P+++ Y T+INGFCK+G ++EA + M GCRPN ++Y ++ GLC R
Sbjct: 392 LEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERW 451
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A+ LM++M G N T +++ LC G +QA+ L+ ++ +PD+ SY V
Sbjct: 452 VDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTV 511
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K GK+DEA+ LL M +G+ P ++++ L + G ++R I + + +
Sbjct: 512 IDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTI 571
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ V YN +I LC G + +E L M+ SG + + Y+ L++G EG V+
Sbjct: 572 RSDAVLYNAVISSLCKRGGTDRAIEFLA-YMVSSGCMPNESTYTILIRGLASEGFVKEAQ 630
Query: 458 QIAHEMVTKKGRLLK--LKNF 476
++ E+ + KG L K +K+F
Sbjct: 631 EMLTELCS-KGALRKHFMKHF 650
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 150/276 (54%), Gaps = 4/276 (1%)
Query: 192 PDVSTYTTMIRGYC---KMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
PDV +Y +++G C + G +++ + + PN++ +NT+I C+ G E +
Sbjct: 223 PDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQV 282
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +M++ GC P+ Y ++ G+C G ++ A ++ +M G K NV + ++LKGLC
Sbjct: 283 LAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCS 342
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+++QA L + + + D ++ ++++ FC+ G I LL++M G P V +
Sbjct: 343 AERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVIT 402
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ V + G +D A++LLK M C PN +SY ++ GLC A+ R D EDL+ +M
Sbjct: 403 YTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAE-RWVDAEDLMSQM 461
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
I G + + ++ ++ C++G VE +++ +M+
Sbjct: 462 IEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQML 497
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 6/272 (2%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
Y M+ GYC+ G + +A+++ + V PN Y ++ C +G + +A ++EM RG
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRG 145
Query: 257 CRPNELTYNAMIYGLC---INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC-VVGKF 312
C P Y+ ++ C G A ++ + G +V +L +C G
Sbjct: 146 CAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSV 205
Query: 313 DQAVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+A+ LR++ + +PDV SY V+ G C + L++EM G P V +FN
Sbjct: 206 DEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNT 265
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L NG +R +L QM C P+ Y T++ G+C +G ++ +++DRM
Sbjct: 266 LIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVC-KEGHLEVAHEILDRMPSY 324
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + Y+ +LKG C E ++ EM
Sbjct: 325 GLKPNVVCYNTVLKGLCSAERWEQAEELLAEM 356
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 153/348 (43%), Gaps = 48/348 (13%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ R + A + VPP+ TY ++R C G I +A V D M
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVP----VPPNAYTYFPVVRALCARGRIADALSVLDEM 141
Query: 221 TVK---PNLLAYNTMINGFCKK-------------------------------------- 239
+ P Y+ ++ C +
Sbjct: 142 RRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQ 201
Query: 240 -GELEEAKKCMNEMMNR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G ++EA + + ++ GC P+ ++YNA++ GLC+ R + LM +M G NV
Sbjct: 202 GGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVV 261
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T +++ LC G F++ L +++ PD++ Y V++G CK G + A +L M
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ GLKP V +N V + L ++A LL +M DC + V++N ++ C G
Sbjct: 322 PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQ-NGL 380
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ V +L+++M+ G D Y+ ++ G+C+EG ++ + + M
Sbjct: 381 VYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAA 428
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 166/321 (51%), Gaps = 8/321 (2%)
Query: 150 KQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
K++E C + +YN+++ L + A FF ++V + + PP+V TY++++ G+C
Sbjct: 200 KKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGI-PPNVVTYSSILHGFCN 258
Query: 207 MGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+G + A +F M V PN + + +++G CK+G + EA++ M G P+ T
Sbjct: 259 LGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYT 318
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y+A++ G C+ ++DEA+ L M GF +V + ++ G C + ++A L +
Sbjct: 319 YSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMY 378
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ ++ PD +Y ++ GFC+ G+ A L KEM + GL P +++ + L ++G LD
Sbjct: 379 DRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLD 438
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A LLK M + P+ YN +I G+C G+++ +L + G Y+ +
Sbjct: 439 EAFRLLKAMQESKIEPHICIYNILIQGMC-NFGKLEAARELFSNLFVKGIQPSVVTYTVM 497
Query: 444 LKGYCEEGNVENVMQIAHEMV 464
+ G +EG ++ +MV
Sbjct: 498 ISGLLKEGLSNEACEMFRKMV 518
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 5/321 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S ++ + + G + A F Q ++ L+ L + I A F +++
Sbjct: 250 SSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVF-EMMT 308
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
EN V PD TY+ ++ GYC ++ A+K+FD+M K P++ YN +ING CK L
Sbjct: 309 ENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLN 368
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EAK ++EM +R P+ +TY+ ++ G C GR A+ L +M G + T+ +L
Sbjct: 369 EAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILL 428
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GLC G D+A L+ + E+ + P + Y ++I G C GK + A L + +G++
Sbjct: 429 DGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQ 488
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P+V ++ + L++ G + A + ++M CLPN +YN I G + G +
Sbjct: 489 PSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGF-LRNGDPSNAVR 547
Query: 424 LVDRMIRSGHNLDFTMYSCLL 444
L++ M+ G + D + + LL
Sbjct: 548 LIEEMVGRGFSADSSTFQMLL 568
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 159/350 (45%), Gaps = 42/350 (12%)
Query: 158 LYSYNSLLGVLVRVN--SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
+Y+ L+ L N + A ++ K + P V T+ T++ G C I +A K
Sbjct: 104 VYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHV-TFGTLLNGLCSKAKIIDAVK 162
Query: 216 VFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+FD M P+L+ Y T+I G CK G A + + +M +GC+P+ + YN +I LC
Sbjct: 163 LFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLC 222
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL-----RNVM---- 323
+ R +EA ++M G NV T+ S+L G C +G+ ++A RNVM
Sbjct: 223 KDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTV 282
Query: 324 --------------------------EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
E + PD +Y +++G+C + DEA L M
Sbjct: 283 TFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM 342
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+G P+V +N + ++ L+ A LL +M D P+ V+Y+T++ G C A GR
Sbjct: 343 VGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQA-GR 401
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
Q + L M G D YS LL G C+ G+++ ++ M K
Sbjct: 402 PQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESK 451
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 165/345 (47%), Gaps = 27/345 (7%)
Query: 140 KAAIFWFHQ-------------AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
++ +F+ HQ I NG +YN+L +S+ A F+Q++
Sbjct: 10 RSFLFFIHQHFTTSTASTTNISPSSITNGGFCSNYNNL-------HSVADAVASFNQLLG 62
Query: 187 ENVVPPDVSTYTTMIRGYCK---MGMIENAKKVFDVMTVKPNLLAYNTMINGFCK--KGE 241
+PP V + ++ K + + K D+ ++PN+ +IN C +
Sbjct: 63 IRPLPP-VVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDH 121
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ A + +M G +P +T+ ++ GLC ++ +A L ++ GF ++ T+ +
Sbjct: 122 VHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTT 181
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++KGLC +G A+ L+ + E PDV +Y VI+ CK +++EA+ EM +G
Sbjct: 182 IIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQG 241
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P V +++++ G+L+ A L KQM + +PN V++ ++ GLC +G + +
Sbjct: 242 IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLC-KEGMILEA 300
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + M +G D YS L+ GYC + ++ ++ MV K
Sbjct: 301 RRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGK 345
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 103/196 (52%), Gaps = 8/196 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++L+ + ++A++ F ++ ++P D TY+ ++ G CK G ++ A ++
Sbjct: 388 TYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLP-DSITYSILLDGLCKHGHLDEAFRLLKA 446
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++P++ YN +I G C G+LE A++ + + +G +P+ +TY MI GL G
Sbjct: 447 MQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGL 506
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+EA + KM +NG N T+ ++G G AV + ++ + D ++++
Sbjct: 507 SNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQM 566
Query: 337 VINGFCKIGKSDEAIS 352
+++ + +DE IS
Sbjct: 567 LLD----LESNDEIIS 578
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 177/338 (52%), Gaps = 5/338 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ +Y G + A+ F K E L S NSLLG L++ N ++L + F +
Sbjct: 151 LMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHK 210
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
V+ PDV TYT MI +CK+G +++AK+V M K PNL+ YN +I G C+ L+EA
Sbjct: 211 VL-PDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEA 269
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M+++G P+ TY+ +I G C+ R EAK+++ +M G K T+ +++ G
Sbjct: 270 IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDG 329
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
G +QA ++ + ++ + ++NG CK GK ++A+ +++EM +G++P
Sbjct: 330 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPD 389
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+++ + + RA LL +M + P ++Y+ II GLC G +Q ++
Sbjct: 390 SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC-GNLQGTNAIL 448
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M+ +G + +Y+ L+ + +EG VE I M
Sbjct: 449 REMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 486
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 176/343 (51%), Gaps = 5/343 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI+ + N+ A + K+ + + +Y+ ++ L R +++ ++V
Sbjct: 394 SLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVM 453
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
N + P+ YTT++ + K G +E ++ + + M + P++ YN++I GFCK +E
Sbjct: 454 -NGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRME 512
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ + EM+ R RPN TY A I G G ++ A +M G NV + +++
Sbjct: 513 EARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 572
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+G C G +A R ++ + DV++Y V+I+G + GK EA + E++ +GL
Sbjct: 573 EGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL 632
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P F++N++ + G +D+A LL++M P+ V+YN +I GLC A G ++ ++
Sbjct: 633 PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA-GEIERAKN 691
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L D + G + Y+ ++ GYC+ N Q+ EM+ +
Sbjct: 692 LFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLR 734
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 164/308 (53%), Gaps = 6/308 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y + + + +++A+ +F++++ V+P +V YT +I G+CK G + A VF
Sbjct: 531 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP-NVGIYTALIEGHCKEGNVTEAFSVFR 589
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ V ++ Y+ +I+G + G++ EA +E+ +G PN TYN++I G C G
Sbjct: 590 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 649
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
VD+A L+ +M + G ++ T+ ++ GLC G+ ++A ++ + P+ +Y
Sbjct: 650 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 709
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++G+CK A LL+EM RG+ P F +N + + + ++A+ L ++M +
Sbjct: 710 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK 769
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ VS+NT+I G C + G++Q+ L++ MI + Y+ L+ C+ G +
Sbjct: 770 G-FASTVSFNTLIEGYCKS-GKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGE 827
Query: 456 VMQIAHEM 463
++ EM
Sbjct: 828 AKRLWLEM 835
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 174/345 (50%), Gaps = 10/345 (2%)
Query: 127 SKLIKAYGDRGNVKAA--IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ LI+ + GNV A +F F ++++ + +Y+ L+ L R + A F ++
Sbjct: 569 TALIEGHCKEGNVTEAFSVFRFILSRRVLQD--VQTYSVLIHGLSRNGKMHEAFGIFSEL 626
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+E + P+ TY ++I G CK G ++ A ++ + M +K P+++ YN +I+G CK GE
Sbjct: 627 -QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 685
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+E AK +++ RG PN +TY AM+ G C + A L+ +M L G + +
Sbjct: 686 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 745
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L C KF++A+ + ++E V S+ +I G+CK GK EA LL+EM +
Sbjct: 746 ILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQ 804
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P ++ ++ + G + A L +M + + +P +Y +++ G G M +V
Sbjct: 805 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY-HNIGNMSEV 863
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L + M+ G D Y ++ YC EGNV ++ E++ K
Sbjct: 864 SALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVK 908
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 178/362 (49%), Gaps = 6/362 (1%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
+I ++ N K + + L+ A+ G V+ + + ++ ++ YNSL+
Sbjct: 446 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 505
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPN 225
+ ++ A + +++ E + P+ TY I GY K G +E A + F+ M V PN
Sbjct: 506 CKAKRMEEARTYLMEML-ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 564
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+ Y +I G CK+G + EA +++R + TY+ +I+GL NG++ EA + +
Sbjct: 565 VGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFS 624
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+++ G N T+ S++ G C G D+A L + +NPD+ +Y ++I+G CK G
Sbjct: 625 ELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 684
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ + A +L ++ RGL P ++ A+ ++ A LL++M P+ YN
Sbjct: 685 EIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN 744
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
I+ C + + + DL M+ G + ++ L++GYC+ G ++ + EM+
Sbjct: 745 VIL-NFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIE 802
Query: 466 KK 467
K+
Sbjct: 803 KQ 804
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 175/381 (45%), Gaps = 38/381 (9%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + +I A+ GNVK A + + L +YN ++G L R + A E
Sbjct: 216 YTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRS 275
Query: 184 IVKENVVP----------------------------------PDVSTYTTMIRGYCKMGM 209
+V + +VP P+ TY +I G+ + G
Sbjct: 276 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 335
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
IE A ++ D M ++ NL+ +NT++NG CK G++E+A + M EMM +G P+ TY+
Sbjct: 336 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSL 395
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I G C + A L+ +M+ V T+ ++ GLC G LR ++
Sbjct: 396 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 455
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P+ Y ++ K G+ +E+ +L+ MR +G+ P VF +N++ + ++ A
Sbjct: 456 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 515
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L +M + PN +Y I G A G M+ + + M+ G + +Y+ L++G
Sbjct: 516 TYLMEMLERRLRPNAHTYGAFIDGYSKA-GEMEIADRYFNEMLSCGVLPNVGIYTALIEG 574
Query: 447 YCEEGNVENVMQIAHEMVTKK 467
+C+EGNV + +++++
Sbjct: 575 HCKEGNVTEAFSVFRFILSRR 595
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 144/279 (51%), Gaps = 4/279 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
P+ + ++ Y KMG + A VF +P+LL+ N+++ K ++E K
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M P+ TY MI C G V +AK ++ +M G N+ T+ ++ GLC
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
D+A+ R++++ + PD+ +Y+++INGFC +S EA +L EM GLKP +
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+NA+ + G++++A + +M N + +NT++ G+C A G+M+ +++ M
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKA-GKMEKALEIMQEM 381
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ G D YS L++G+C N+ ++ EM +K
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 420
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 164/380 (43%), Gaps = 49/380 (12%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI G + A F + ++ ++YNSL+ + ++ A + ++
Sbjct: 604 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI 663
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + PD+ TY +I G CK G IE AK +FD + + PN + Y M++G+CK
Sbjct: 664 KGI-NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 722
Query: 244 EAKKCMNEMMNRGCRPNELTYN----------------------------------AMIY 269
A + + EM+ RG P+ YN +I
Sbjct: 723 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIE 782
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G C +G++ EA L+ +M F N T+ S++ C G +A + E N+ P
Sbjct: 783 GYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMP 842
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI--- 386
K+Y +++G+ IG E +L +EM A+G++P ++ + G + A
Sbjct: 843 TAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLK 902
Query: 387 --LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
+L+K MP + +Y+ +I LC K +V L++ + SG L S +
Sbjct: 903 DEILVKGMPM-----SVAAYDALIQALC-KKEEFFEVLKLLNEIGESGFRLGLPTCSVIA 956
Query: 445 KGYCEEGNVENVMQIAHEMV 464
+G+ GN++ ++ MV
Sbjct: 957 RGFQIAGNMDEAAEVLRSMV 976
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 132/277 (47%), Gaps = 3/277 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFCKKGELEEAKK 247
VPPD Y ++ CK E A +F M K + +++NT+I G+CK G+L+EA
Sbjct: 736 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANH 795
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ EM+ + PN +TY ++I C G + EAK L +M+ T+ S+L G
Sbjct: 796 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 855
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
+G + ++ + PD +Y V+I+ +C+ G EA L E+ +G+ +V
Sbjct: 856 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVA 915
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+++A+ + L + E + LL ++ + + + I G +A G M + +++
Sbjct: 916 AYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIA-GNMDEAAEVLRS 974
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M++ G + T L+ G N E+ + +M
Sbjct: 975 MVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 1011
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 214/440 (48%), Gaps = 22/440 (5%)
Query: 41 ISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITD 100
+ S+ + ++S +GS V ++I + + A+ F+ A+ N ++ H T ++ +
Sbjct: 1 MGSKTVIKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQT--FSLMIS 58
Query: 101 VLLSHSLISIAASLL-----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG 155
L+S + +A LL + N D F+S + +AYG A+ F + K+ E
Sbjct: 59 RLVSANHFRLAEELLCRMKEEKCNITEDIFLS-ICRAYGRVHKPLDAVRVFRKMKEYECE 117
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK-MGMIENAK 214
SY ++ +LV N +KLA F+ + ++E +PP V++ +I+ CK G ++ A
Sbjct: 118 PSQKSYITVFAILVGENQLKLALRFY-RYMREMGIPPSVASLNVLIKALCKNSGTMDAAL 176
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++F M + P+ Y T+I G C+ G++ EAK+ EM + C P +TY ++I+GL
Sbjct: 177 RIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGL 236
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C + +D A L+ +M G K NV T+ S++ G C G +A+ L ++ P++
Sbjct: 237 CQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNM 296
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +++G CK GK EA+ +L M+ +GL+P + + + + A L +
Sbjct: 297 ITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDE 356
Query: 392 MPQMDCLPNFVSY-------NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
M PN +++ N ++ GLC L M G ++D + L+
Sbjct: 357 MVLGGISPNRLTWSLHVRIHNIVVQGLCTEHP--NRAFQLYLSMRTRGISIDAKTFDSLV 414
Query: 445 KGYCEEGNVENVMQIAHEMV 464
+C +G++ + EMV
Sbjct: 415 NYFCNKGDLHKAAHLVDEMV 434
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 73/177 (41%)
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
NGF+ + T M+ L F A L + E N + + + ++ K +
Sbjct: 44 NGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLD 103
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A+ + ++M+ +P+ S+ VF ILV +L A+ + M +M P+ S N +I
Sbjct: 104 AVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIK 163
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC G M + M G Y L+ G C G + ++ EM TK
Sbjct: 164 ALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETK 220
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 45/171 (26%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +Y++L+ L + ++ A E ++ K + PD Y +I G+C + A
Sbjct: 296 MITYSTLVHGLCKEGKLQEAVEILDRM-KLQGLRPDAGLYGKIISGFCDICKFHEAANFL 354
Query: 218 DVMT---VKPNLLA-----------------------------------------YNTMI 233
D M + PN L +++++
Sbjct: 355 DEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLV 414
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N FC KG+L +A ++EM+ GC P+E T+NA++ +V E+ L+
Sbjct: 415 NYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELV 465
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 180/347 (51%), Gaps = 44/347 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM------------------- 200
++N+L+ L R + ++ A ++ V P D +T+TT+
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAP-DETTFTTLMQGFVEEGSIEAALRVKAR 241
Query: 201 ----------------IRGYCKMGMIENA-----KKVFDVMTVKPNLLAYNTMINGFCKK 239
I GYCK+G +E+A +++ D +P+ + YNT +NG C+
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD--GFEPDQITYNTFVNGLCQN 299
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+ A K M+ M+ G P+ TYN ++ LC NG+++EAK ++ +M G +++T
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ LC + ++A+ R V ++PDV ++ ++IN CK+G A+ L +EM+
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G P ++N + L G+L +A+ LLK M C + ++YNTII GLC K R++
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC-KKMRIE 478
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E++ D+M G + + ++ L+ G C++ +++ ++ ++M+++
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 156/292 (53%), Gaps = 4/292 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N L+ L +V LA F ++ K + PD TY T+I C +G + A +
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 449
Query: 218 DVM--TVKP-NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M T P + + YNT+I+G CKK +EEA++ ++M +G N +T+N +I GLC +
Sbjct: 450 KDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 509
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
++D+A L+ +M G + N T+ S+L C G +A L + DV +Y
Sbjct: 510 KKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTY 569
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ING CK G++ A+ +L+ MR +G++PT ++N V + L + A+ L ++M +
Sbjct: 570 GTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+ P+ ++Y + GLC G +++ D + M+ G +F+ + L +G
Sbjct: 630 VGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 132/277 (47%), Gaps = 36/277 (12%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ + + YN ++N + +++ + +EM RG +P+ +T+N ++ LC +V A
Sbjct: 142 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+++ +M G + +T ++++G G + A+ ++E + + V+ING+
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261
Query: 342 CKIGKSDEAISLLKEMRARGLK-----------------------------------PTV 366
CK+G+ ++A+ +++ A G + P V
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
F++N V L +NG+L+ A +L QM CLP+ ++NT+I LC R+++ DL
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN-RLEEALDLAR 380
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ G + D ++ L+ C+ G+ +++ EM
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 141/341 (41%), Gaps = 53/341 (15%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
NI+ + + +P+ AL F N P++ Y + D L S + A LL
Sbjct: 395 NILINALCKVGDPHLALRLFEEMKNSGCTPDEV-----TYNTLIDNLCSLGKLGKALDLL 449
Query: 116 KNSNKL----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
K+ S + +I + ++ A F Q ++N+L+ L +
Sbjct: 450 KDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 509
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLA 228
I A E +Q++ E + P ++ TY +++ YCK G I+ A + + MT + +++
Sbjct: 510 KKIDDAFELINQMISEGLQPNNI-TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRP----------------------------- 259
Y T+ING CK G + A K + M +G RP
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Query: 260 ------NELTYNAMIYGLCINGR-VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ LTY + GLC G + EA M +M GF S+ + + +GL +G
Sbjct: 629 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMD 688
Query: 313 DQAVGYLRNVMEANMNPDVKSYEV-VINGFCKIGKSDEAIS 352
D + + +ME D++ +V I G+ KI K +A++
Sbjct: 689 DYFIRAIEIIME---KVDLRESDVSAIRGYLKIRKFYDALA 726
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 117/294 (39%), Gaps = 56/294 (19%)
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P Y +I L G +D K+L+A+MR G + + S L FD AV
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131
Query: 319 LRNVMEA-------------------------------------NMNPDVKSYEVVINGF 341
+ N ++ + PDV ++ ++
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C+ + A+ +L+EM +RG+ P +F + + VE G ++ A+ + +M +M C
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
V+ N +I G C GR++D + + I G D Y+ + G C+ +V + +++
Sbjct: 252 VTVNVLINGYCKL-GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310
Query: 462 EMVT------------------KKGRLLKLKNFLTRVVDALLLMWIVTGGSWIS 497
MV K G+L + K L ++VD L I T + I+
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 179/346 (51%), Gaps = 11/346 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+++A D+G V A+ + + C + SYN++L L ++ ++V
Sbjct: 187 VLQAVCDQGPVDEAVRLLRDL--LPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMV 244
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
PP++ T++T+I C+ G+ E +V M P++ Y T+I+G CK+ L
Sbjct: 245 AAGC-PPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERL 303
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E A+ +N M + G PN + YN ++ GLC R +EA+ L+A+M + T +
Sbjct: 304 EVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNIL 363
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ LC G D+ + L ++E PDV +Y VINGFCK G DEA+ LL+ M A G
Sbjct: 364 VDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGC 423
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+P S+ V + L A L+ QM Q C PN V++NT+I LC KG ++
Sbjct: 424 RPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLC-KKGLVEQAI 482
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+L+ +M+ +G + D YS ++ G + GN + +++ + MV KKG
Sbjct: 483 ELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMV-KKG 527
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 170/324 (52%), Gaps = 11/324 (3%)
Query: 145 WFHQAKQIEN---GAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
W H +E C + ++++L+G L R + E H + E+ PDV Y
Sbjct: 233 WGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEV-HAQMAEHGCAPDVRMYA 291
Query: 199 TMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
T+I G CK +E A+ + + M + PN++ YNT++ G C EEA+ + EM ++
Sbjct: 292 TIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDK 351
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
C +++T+N ++ LC NG VD ++ +M +G +V T+ +++ G C G D+A
Sbjct: 352 DCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEA 411
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
V LR++ P+ SY +V+ G C + +A L+ +M +G P +FN +
Sbjct: 412 VMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINF 471
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L + G +++AI LLKQM C P+ +SY+T+I GL A G + +L++ M++ G +
Sbjct: 472 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA-GNTDEALELLNVMVKKGMSP 530
Query: 436 DFTMYSCLLKGYCEEGNVENVMQI 459
+ +YS + EG + V+Q+
Sbjct: 531 NTIIYSSIASALSGEGRINKVIQM 554
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 168/321 (52%), Gaps = 8/321 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+LL L + + AE ++ ++ P D T+ ++ C+ G+++ +V + M
Sbjct: 325 YNTLLKGLCSADRWEEAEGLLAEMFDKDC-PLDDVTFNILVDFLCQNGLVDRVIEVLEQM 383
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
P+++ Y T+INGFCK+G ++EA + M GCRPN ++Y ++ GLC R
Sbjct: 384 LEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERW 443
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A+ LM++M G N T +++ LC G +QA+ L+ ++ +PD+ SY V
Sbjct: 444 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 503
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K G +DEA+ LL M +G+ P ++++ L G +++ I + + +
Sbjct: 504 IDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTV 563
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ V YN +I LC +G + + M+ SG + + Y+ L++G EG V+
Sbjct: 564 RSDAVLYNAVISSLC-KRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 622
Query: 458 QIAHEMVTKKGRLLK--LKNF 476
+I E+ + KG L K +K+F
Sbjct: 623 EILTELCS-KGALRKHLMKHF 642
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 137/278 (49%), Gaps = 5/278 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
DV +++ C G ++ A + + +P++++YN ++ G C +
Sbjct: 180 DVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDL 239
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M EM+ GC PN +T++ +I LC NG + + A+M +G +V + +++ G+C
Sbjct: 240 MEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCK 299
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+ + A G L + ++P+V Y ++ G C + +EA LL EM + +
Sbjct: 300 EERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVT 359
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
FN + L +NG +DR I +L+QM + C+P+ ++Y T+I G C +G + + L+ M
Sbjct: 360 FNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFC-KEGLIDEAVMLLRSM 418
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G + Y+ +LKG C + ++ +M+ +
Sbjct: 419 AACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQ 456
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 2/271 (0%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
Y M+ GYC+ G + A+++ + V PN Y ++ C +G + +A +++M RG
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRG 141
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C P Y+ + C A ++ + G +V +L+ +C G D+AV
Sbjct: 142 CAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAV 201
Query: 317 GYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
LR+++ + PDV SY V+ G C + L++EM A G P + +F+ +
Sbjct: 202 RLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGH 261
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L NG +R + QM + C P+ Y TII G+C + R++ +++RM G +
Sbjct: 262 LCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEE-RLEVARGILNRMPSYGLSP 320
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ Y+ LLKG C E + EM K
Sbjct: 321 NVVCYNTLLKGLCSADRWEEAEGLLAEMFDK 351
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 123/267 (46%), Gaps = 5/267 (1%)
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+ +IR C G A + ++AYN M+ G+C+ G+L A++ +
Sbjct: 51 SALIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLAAARRLAASV---PV 107
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
PN TY ++ LC GR+ +A ++ M G + L+ C F AVG
Sbjct: 108 APNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVG 167
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR-GLKPTVFSFNAVFRIL 376
LR++ DV + +V+ C G DEA+ LL+++ G +P V S+NAV R L
Sbjct: 168 VLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGL 227
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
L+++M C PN V+++T+I LC G + V ++ +M G D
Sbjct: 228 CMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCR-NGLFERVHEVHAQMAEHGCAPD 286
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEM 463
MY+ ++ G C+E +E I + M
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRM 313
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFH--QAKQIENGACLYSYNSLLGVLVRV 171
++K + S + A G + I F Q + + A LY N+++ L +
Sbjct: 523 MVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLY--NAVISSLCKR 580
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNL 226
A EF +V V P+ STYT +IRG G ++ A+++ + K L
Sbjct: 581 GETDRAIEFLAYMVSSGCV-PNESTYTILIRGLASEGFVKEAQEILTELCSKGAL 634
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 157/298 (52%), Gaps = 14/298 (4%)
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLL 227
+ + L E FF PD T+ ++ G K G +++A +V D+M P++
Sbjct: 288 IEEMSLREGFF----------PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIY 337
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YN++I+G CK GE++EA K +N+M+ R C PN +TYN +I LC +V+EA L +
Sbjct: 338 TYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVL 397
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
G +V T+ S+++GLC+ A+ + + +PD +Y ++I+ C GK
Sbjct: 398 TGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKL 457
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
EA++LLKEM G V ++N + +N + A + QM N V+YNT+
Sbjct: 458 QEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTL 517
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
I GLC ++ R+++ L+D+MI G D Y+ LL +C+ G+++ I M +
Sbjct: 518 IDGLCKSE-RVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMAS 574
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 216/482 (44%), Gaps = 95/482 (19%)
Query: 72 LFFFNWAS-NPNPNPNK------YHHTTPC--YTAITDVLLSHSLISIAASLLKNSNKLS 122
+ F WAS PN P+ H + A+ D+L + I+ S++ N + L
Sbjct: 73 IHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKE---MKISLSVIDNDSLLV 129
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEF 180
I++Y G + I F A ++E G A + YN LL VLV N +KL E
Sbjct: 130 ------FIESYASFG-LYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIA 182
Query: 181 FHQIVKENVVP----------------------------------PDVSTYTTMIRGYCK 206
+V + P PD T+TT+++G+ +
Sbjct: 183 HSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIE 242
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM-MNRGCRPNEL 262
G ++ A +V + M + N ++NGFCK+G +EEA + + EM + G P++
Sbjct: 243 EGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKY 302
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
T+N ++ GL G V A +M M GF ++ T+ S++ GLC +G+ D+AV L +
Sbjct: 303 TFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQM 362
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDE--------------------------------- 349
+E + +P+ +Y +I+ CK + +E
Sbjct: 363 IERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNH 422
Query: 350 --AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
A+ L KEM+ +G P F++N + L G+L A+ LLK+M C N ++YNT+
Sbjct: 423 TVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTL 482
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
I G C K R+ + E++ D+M G + + Y+ L+ G C+ VE Q+ +M+ +
Sbjct: 483 IDGFCKNK-RIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEG 541
Query: 468 GR 469
R
Sbjct: 542 LR 543
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 160/314 (50%), Gaps = 5/314 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ L + +A E + ++ K PD TY +I C G ++ A +
Sbjct: 408 TYNSLIQGLCLSRNHTVAMELYKEM-KTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKE 466
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V N++ YNT+I+GFCK + EA++ ++M +G N +TYN +I GLC + R
Sbjct: 467 MEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSER 526
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+EA LM +M + G + + T+ S+L C G +A ++ + PD+ +Y
Sbjct: 527 VEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGT 586
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK G+ + A LL+ ++ +G+ T ++N V + L A+ L ++M +
Sbjct: 587 LIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKA 646
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+Y + GLC G + + D V M+ G+ +F+ + L +G V +
Sbjct: 647 EAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTL 706
Query: 457 MQIAHEMVTKKGRL 470
+++ +MV +K +
Sbjct: 707 IKLI-DMVMEKAKF 719
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++YNSLL + IK A + Q + + PD+ TY T+I G CK G +E A K+
Sbjct: 547 FTYNSLLTYFCKAGDIKKAADIV-QTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLR 605
Query: 219 VMTVKP-NLL--AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ +K NL AYN +I ++ +EA + EM+ + P+ +TY + GLC G
Sbjct: 606 TIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGG 665
Query: 276 R-VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+ EA + +M G+ S+ + +GL + + + VME D +
Sbjct: 666 GPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEV- 724
Query: 335 EVVINGFCKIGKSDEAISLL 354
+I GF KI K +A++ L
Sbjct: 725 -TMIRGFLKISKYQDALATL 743
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 209/473 (44%), Gaps = 59/473 (12%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKL----SDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y A+ + + + A SL N +D S LI ++ RG + A+ + +
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
++ A +Y Y+SL+ ++ ++ A+ F +++ N + P+V YT++I GYCK G +
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA-NGLKPNVVIYTSLISGYCKEGEL 476
Query: 211 ENAKKVFDVMTVK--------------------------------------PNLLAYNTM 232
NA +++ MT K PN + YN +
Sbjct: 477 HNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL 536
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
I G CK+G A + ++EM+ +G P+ TY +I GLC GRV EA+ M ++
Sbjct: 537 IEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQ 596
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
K N ++L G C G+ D A+ R ++ + D+ Y V+I G + I
Sbjct: 597 KLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIID 656
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
LLK+M +GL+P + + + G L A L M CLPN V+Y +I GLC
Sbjct: 657 LLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLC 716
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLK 472
G M E L M+ S + Y+C L EGN+E +Q+ H+++
Sbjct: 717 KI-GLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVL-------- 766
Query: 473 LKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVVIMERTVEDGKRSECLIVS 525
L+ FL V +L + G + R +V+V M ++ G +C+ S
Sbjct: 767 LEGFLANTVTYNIL---IRGFCKLGRIQEAAEVLVNM---IDSGISPDCISYS 813
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 160/317 (50%), Gaps = 11/317 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ L +V + EE +++++ VP + + + ++ G K G I +A FD+
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAV-SNLVDGLRKKGNIGSA---FDL 342
Query: 220 MT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
+ V P+L YN +IN CK G+L+EA+ N M ++G PN++TY+ +I C
Sbjct: 343 VNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCK 402
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G++D A + KM G K V + S++ G C +GK A ++ + P+V
Sbjct: 403 RGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVI 462
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I+G+CK G+ A L EM +G+ P ++F A+ L + A L +M
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ + +PN V+YN +I G C +G +L+D M+ G D Y L+ G C G V
Sbjct: 523 EWNVIPNEVTYNVLIEGHC-KEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRV 581
Query: 454 ENVMQIAHEMVTKKGRL 470
+ +++ ++ +L
Sbjct: 582 SEAREFMNDLQGEQQKL 598
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 182/396 (45%), Gaps = 41/396 (10%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
S+ ++ N K + + LI Y G + A +H+ Y++ +L+ L
Sbjct: 446 SLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PN 225
N + A + F ++V+ NV+P +V TY +I G+CK G A ++ D M K P+
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEV-TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPD 564
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA----- 280
Y +I+G C G + EA++ MN++ + NE+ ++A+++G C GR+D+A
Sbjct: 565 TYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACR 624
Query: 281 KML------------------------------MAKMRLNGFKDNVSTHKSMLKGLCVVG 310
+ML + +M G + + + +M+ G
Sbjct: 625 EMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAG 684
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
A G ++ P+V +Y +ING CKIG D+A L +EM A P ++
Sbjct: 685 NLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYA 744
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
L G +++AI L + + L N V+YN +I G C GR+Q+ +++ MI
Sbjct: 745 CFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKL-GRIQEAAEVLVNMID 802
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
SG + D YS ++ YC G+++ +++ M+ +
Sbjct: 803 SGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNR 838
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 157/329 (47%), Gaps = 9/329 (2%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLKN----SNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
T Y + L S +S A + + KL++ S L+ Y G + A+
Sbjct: 565 TYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACR 624
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ L Y+ L+ ++R + + Q+ + + P +V YTTMI K
Sbjct: 625 EMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNV-LYTTMIDANAKA 683
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G ++ A ++D+M + PN++ Y +ING CK G +++A+ EM+ PN+ TY
Sbjct: 684 GNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTY 743
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+ L G +++A L + L GF N T+ +++G C +G+ +A L N+++
Sbjct: 744 ACFLDYLTSEGNIEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMID 802
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ ++PD SY +I +C+ G EAI L + M RG+ P ++N + GEL +
Sbjct: 803 SGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTK 862
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCM 413
A L M + PN +YN++I G C+
Sbjct: 863 AFELRDDMMRRGVKPNRATYNSLIHGTCL 891
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 39/315 (12%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+ P + T + ++ G ++ A +FD + ++P++ Y ++ C+ + A+
Sbjct: 176 ILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAR 235
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + M + GC + TYN I GLC N RV EA + + G + +V T+ +++ GL
Sbjct: 236 EVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGL 295
Query: 307 CVVGKFD-----------------------------------QAVGYLRNVMEANMNPDV 331
C V +F+ A + V + + P +
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
Y +IN CK GK DEA SL M +GL P +++ + + G+LD A+ L +
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M ++ Y+++I G C G+++ + L D MI +G + +Y+ L+ GYC+EG
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKL-GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474
Query: 452 NVENVMQIAHEMVTK 466
+ N ++ HEM K
Sbjct: 475 ELHNAFRLYHEMTGK 489
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 166/381 (43%), Gaps = 77/381 (20%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM----------GM 209
+ + +L L+R+ ++A F +IV + PDV YT ++R C++ G
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGL-RPDVYVYTAVVRSLCELKDFIRAREVIGR 240
Query: 210 IENA-------------------KKVFDVMTVKPNLLAYN----------TMINGFCKKG 240
+E++ ++V++ + +K NLL+Y T++ G CK
Sbjct: 241 MESSGCDLSVATYNVFIRGLCKNQRVWEAVEIK-NLLSYKGLRADVGTYCTLVLGLCKVE 299
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
E E ++ MNEM+ G P+E + ++ GL G + A L+ K++ G ++ +
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI--------- 351
+++ +C GK D+A N+ + P+ +Y ++I+ FCK GK D A+
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419
Query: 352 --------------------------SLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
SL EM A GLKP V + ++ + GEL A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L +M PN ++ +I GLC A RM + L M+ + Y+ L++
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHAN-RMAEANKLFGEMVEWNVIPNEVTYNVLIE 538
Query: 446 GYCEEGNVENVMQIAHEMVTK 466
G+C+EGN ++ EMV K
Sbjct: 539 GHCKEGNTVRAFELLDEMVEK 559
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 162/360 (45%), Gaps = 45/360 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI+ + GN A + +E G Y+Y L+ L + A EF + +
Sbjct: 536 LIEGHCKEGNTVRAFELLDE--MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENA--------------------------------K 214
E ++ ++ ++ GYCK G +++A +
Sbjct: 594 EQQKLNEM-CFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRR 652
Query: 215 KVFDVMT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
+ D++ ++P+ + Y TMI+ K G L+ A + M++ GC PN +TY A+I
Sbjct: 653 SIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALI 712
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
GLC G +D+A++L +M + N +T+ L L G ++A+ L +V+
Sbjct: 713 NGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAI-QLHDVLLEGFL 771
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
+ +Y ++I GFCK+G+ EA +L M G+ P S++ + G+L AI L
Sbjct: 772 ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKL 831
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+ M P+ V+YN +I G C+ G + +L D M+R G + Y+ L+ G C
Sbjct: 832 WESMLNRGVNPDTVAYNFLIYGCCVT-GELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 88/153 (57%), Gaps = 5/153 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y L L +I+ A + H ++ E + V TY +IRG+CK+G I+ A +V
Sbjct: 742 TYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTV-TYNILIRGFCKLGRIQEAAEVLVN 799
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+ ++Y+T+I +C++G+L+EA K M+NRG P+ + YN +IYG C+ G
Sbjct: 800 MIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGE 859
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+ +A L M G K N +T+ S++ G C++
Sbjct: 860 LTKAFELRDDMMRRGVKPNRATYNSLIHGTCLM 892
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 201/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGQGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + E P + + ++ +CK G I+ A+ VFD +T ++P +++NT++NG+
Sbjct: 123 FYEDSL-ECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ G+L+E + N M G +P+ TY+ +I GLC ++D A L +M NG N
Sbjct: 182 IRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEM 407
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 199/407 (48%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----------------------KNSN 119
+P + + HT Y + L +H ++ A +L+ K +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+ + S LI AY + G ++ AI + K+ + + ++ L+++ KL
Sbjct: 63 RSDXYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ +CK G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + + M G P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNX 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ R ++ ++ PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEM 407
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 156/284 (54%), Gaps = 6/284 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G ++ A F + + S+N+L+ +++ L E F
Sbjct: 137 YFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGD--LDEGFRLK 194
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKK 239
+++ + V PDV TY+ +I G CK +++A ++FD M + PN + + T+I+G CK
Sbjct: 195 SVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKN 254
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M + G K + T+
Sbjct: 255 GRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITY 314
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G + A Y + +++ N+ D +Y +I+G C+ G+S +A +L+EM +
Sbjct: 315 TTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GLKP + ++ + + G++ LLK+M + +PN V+
Sbjct: 375 VGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 157/283 (55%), Gaps = 5/283 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGE 241
+K+N D+ TY+++I G C G ++ A+ VF D +++ YNTM+ GFC+ G+
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK 340
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++E+ + + +M N ++YN +I GL NG++DEA M+ M G+ + +T+
Sbjct: 341 IKESLE-LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGI 399
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+ GLCV G ++A+G ++ V + + DV +Y +I+ CK + +EA +L+KEM G
Sbjct: 400 FIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG 459
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
++ NA+ L+ + L A L++M + C P VSYN +ICGLC A G+ +
Sbjct: 460 VELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA-GKFGEA 518
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
V M+ +G D YS LL G C + ++ +++ H+ +
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 200/405 (49%), Gaps = 24/405 (5%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSH----SLISIAASLLKNSN-----KL 121
AL F+ S P+ CY + D L + + + LL++S+ K
Sbjct: 203 ALELFDEMSERGVAPD-----VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKT 257
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
+ IS L K G V + + + KQ E LY+Y+SL+ L ++ AE F
Sbjct: 258 HNIMISGLSKC----GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP--NLLAYNTMINGFCKK 239
+++ E DV TY TM+ G+C+ G I+ + +++ +M K N+++YN +I G +
Sbjct: 314 NEL-DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLEN 372
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G+++EA M +G ++ TY I+GLC+NG V++A +M ++ +G +V +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S++ LC + ++A ++ + + + + +I G + + EA L+EM
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G +PTV S+N + L + G+ A +K+M + P+ +Y+ ++CGLC + R
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC--RDRKI 550
Query: 420 DVE-DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D+ +L + ++SG D M++ L+ G C G +++ M + M
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 169/373 (45%), Gaps = 42/373 (11%)
Query: 115 LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+K + + D + S LI D GNV A F++ + + + +YN++LG R
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK 340
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP--------- 224
IK + E + + +N V ++ +Y +I+G + G I+ A ++ +M K
Sbjct: 341 IKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 225 -----------------------------NLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
++ AY ++I+ CKK LEEA + EM
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G N NA+I GL + R+ EA + +M NG + V ++ ++ GLC GKF +A
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+++ ++E PD+K+Y +++ G C+ K D A+ L + GL+ V N +
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L G+LD A+ ++ M +C N V+YNT++ G G + M + G
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF-FKVGDSNRATVIWGYMYKMGLQP 637
Query: 436 DFTMYSCLLKGYC 448
D Y+ ++KG C
Sbjct: 638 DIISYNTIMKGLC 650
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 135/267 (50%), Gaps = 18/267 (6%)
Query: 154 NGACLYSY-NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIEN 212
+G C+ Y N LGV+ Q V+ + DV Y ++I CK +E
Sbjct: 402 HGLCVNGYVNKALGVM--------------QEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 213 AKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
A + M+ V+ N N +I G + L EA + EM GCRP ++YN +I
Sbjct: 448 ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILIC 507
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
GLC G+ EA + +M NG+K ++ T+ +L GLC K D A+ +++ +
Sbjct: 508 GLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLET 567
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
DV + ++I+G C +GK D+A++++ M R + ++N + + G+ +RA ++
Sbjct: 568 DVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +M P+ +SYNTI+ GLCM +G
Sbjct: 628 GYMYKMGLQPDIISYNTIMKGLCMCRG 654
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 135/289 (46%), Gaps = 6/289 (2%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF----DVMTVKPNLLAYNTMINGFCK 238
++++ D ++I+ Y K M + A VF ++ +P + +YNT++N F +
Sbjct: 67 ELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVE 126
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ + + G PN TYN +I C ++A+ + M GFK +V +
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFS 186
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE-M 357
+ +++ L GK D A+ + E + PDV Y ++I+GF K A+ L +
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ P V + N + L + G +D + + ++M Q + + +Y+++I GLC A G
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA-GN 305
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E + + + ++D Y+ +L G+C G ++ +++ M K
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 111/219 (50%), Gaps = 4/219 (1%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
N+L+G L+R + + A F ++ K N P V +Y +I G CK G A M
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGK-NGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526
Query: 221 --TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
KP+L Y+ ++ G C+ +++ A + ++ + G + + +N +I+GLC G++D
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLD 586
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A +MA M N+ T+ ++++G VG ++A + + + PD+ SY ++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
G C A+ + R G+ PTV+++N + R +V
Sbjct: 647 KGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 206/407 (50%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLHSYCTMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + ++ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + ++ +CK G I ++ VFD + ++P+++++NT++NG+
Sbjct: 123 FYKEIL-ECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
++G+L++ + + M G +P+ TY+ +I GLC ++DEA L +M G N
Sbjct: 182 IRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C GK D A+ + ++ +++PD+ +Y +I G CK G +A +L+ E
Sbjct: 242 VTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + ++G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEM 407
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 151/283 (53%), Gaps = 4/283 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+F + L+ + G ++ + F ++ + S+N+L+ +R +
Sbjct: 137 YFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRL-KS 195
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+ + V PDV TY+ +I G CK ++ A ++F M K PN + + T+I+G CK G
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+++ A + +M+++ P+ +TYN +IYGLC G + +A+ L+ +M + G K + T+
Sbjct: 256 KVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYT 315
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G C G + A Y + ++E N+ D +Y +I+G C+ G+S +A +L+EM +
Sbjct: 316 TLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GLKP ++ + + G++ LLK+M + +P+ V+
Sbjct: 376 GLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC------------------RPNEL 262
T + L +Y TMI+ C L EAK + +++R R +
Sbjct: 8 TFRHTLHSYCTMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQRSDIY 67
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
++ +I +G + +A R + F+ T + +L+ L + F G+ + +
Sbjct: 68 VFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEI 127
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+E + + ++++ FCK G+ + S+ +R GL+P+V SFN + + G+L
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDL 187
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
D+ L M P+ +Y+ +I GLC + +M + +L M+ G + ++
Sbjct: 188 DKGFRLKSAMHASGVQPDVYTYSVLINGLC-KESKMDEANELFXEMLDKGLVPNGVTFTT 246
Query: 443 LLKGYCEEGNVENVMQIAHEMVTK 466
L+ G+C+ G V+ M+I +M+++
Sbjct: 247 LIDGHCKNGKVDLAMEIYKQMLSQ 270
>gi|255660946|gb|ACU25642.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 484
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 220/435 (50%), Gaps = 33/435 (7%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
+V V++ N HAL FF W N + H + I ++L S ++ A +L
Sbjct: 13 ELVYNVLHGAKNXEHALQFFRWVERSN----LFEHNRETHHKIIEILGRASKLNHARCIL 68
Query: 116 KNSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVR 170
+ K D ++ LI +YG G V+ ++ F + +++ + SY++L V++R
Sbjct: 69 LDMPKKGLEWDEDLWVL-LIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILR 127
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLL 227
+A+ +F++++ E P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 128 RGRYMMAKRYFNKMLSEG-NEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSREIMPDVV 186
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YNTMI G+ + ++EEA+K EM R P +TY +I G RVD+A L+ +M
Sbjct: 187 TYNTMIXGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEM 246
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGK 346
+ G K N T+ ++L GLC K +A L+ ++E + P D + +I+G CK G
Sbjct: 247 KGFGIKPNAITYSTLLPGLCNAQKMSEARSILKEMVEKYITPTDNSIFLRLISGQCKAGD 306
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PN 400
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 307 LDAAADVLKAM----IRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDRLIEKDIILRPQ 362
Query: 401 FV------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ +
Sbjct: 363 STLHLEPSAYNPLIEYLC-NNGQTAKAESLVRQLMKLGVQ-DPTALNALIRGHSQEGSPD 420
Query: 455 NVMQIAHEMVTKKGR 469
+ ++ M+ +K R
Sbjct: 421 SAFELLKIMLRRKAR 435
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 12/261 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LIK Y V A+ + K +Y++LL L + A ++V+
Sbjct: 224 TTLIKGYVSVDRVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAQKMSEARSILKEMVE 283
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ + P D S + +I G CK G ++ A V M +V Y +I +CK G+ +
Sbjct: 284 KYITPTDNSIFLRLISGQCKAGDLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYD 343
Query: 244 EAKKCMNEMMNRG--CRPNEL------TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
+A K ++ ++ + RP YN +I LC NG+ +A+ L+ ++ G +D
Sbjct: 344 QAVKLLDRLIEKDIILRPQSTLHLEPSAYNPLIEYLCNNGQTAKAESLVRQLMKLGVQDP 403
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
+ + ++++G G D A L+ ++ + +Y+ ++ + K + +A + L
Sbjct: 404 TALN-ALIRGHSQEGSPDSAFELLKIMLRRKARSEKSAYDSLVQSYLKKSEPADAKAALD 462
Query: 356 EMRARGLKPTVFSFNAVFRIL 376
M G P F +V L
Sbjct: 463 SMIENGHLPDPALFRSVMESL 483
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 178/375 (47%), Gaps = 41/375 (10%)
Query: 129 LIKAYGDRGNVKAA--IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y G+V+AA + F K + + +Y L+ + + AE+ + +
Sbjct: 267 LINGYVSLGDVEAAKGVLKFMSEKGVSRN--VVTYTLLIKGYCKQCKMDEAEKVLRGMQE 324
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
E + PD Y +I GYC+ G I++A ++ D M +K NL N++ING+CK+GE+
Sbjct: 325 EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIH 384
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ + M++ +P+ +YN ++ G C G EA L KM G + V T+ ++L
Sbjct: 385 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 444
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
KGLC VG FD A+ +M+ + PD Y +++G K+ + A +L K++ ARG
Sbjct: 445 KGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 504
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA--------- 414
+ +FN + L + G++ A + +M + C P+ ++Y T+I G C A
Sbjct: 505 KSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV 564
Query: 415 KGRMQ-------------------------DVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
KG M+ +V DL+ M G + Y L+ G+C+
Sbjct: 565 KGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCK 624
Query: 450 EGNVENVMQIAHEMV 464
EG ++ EM
Sbjct: 625 EGMLDKAFSSYFEMT 639
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 183/408 (44%), Gaps = 74/408 (18%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++K Y ++G K A++ F + L S NSLL LV+ A + Q+++
Sbjct: 162 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVG 221
Query: 189 VVP----------------------------------PDVSTYTTMIRGYCKMGMIENAK 214
+VP P++ TY ++I GY +G +E AK
Sbjct: 222 IVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAK 281
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR-PNELTYNAMIYG 270
V M+ V N++ Y +I G+CK+ +++EA+K + M P+E Y +I G
Sbjct: 282 GVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDG 341
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C G++D+A L+ +M G K N+ S++ G C G+ +A G + +++ N+ PD
Sbjct: 342 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
SY +++G+C+ G + EA +L +M G++PTV ++N + + L G D A+ +
Sbjct: 402 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 461
Query: 391 QMPQMDCLPNFVSY-----------------------------------NTIICGLCMAK 415
M + P+ V Y NT+I GLC
Sbjct: 462 LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC-KM 520
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G+M + E++ D+M G + D Y L+ GYC+ NV ++ M
Sbjct: 521 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 172/394 (43%), Gaps = 79/394 (20%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+++ L ++ + AEE F ++ K+ PD TY T+I GYCK + A KV
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKM-KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA 567
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING- 275
M + P++ YN++I+G K L E + EM RG PN +TY A+I G C G
Sbjct: 568 MEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 627
Query: 276 ----------------------------------RVDEAKMLMAKMRLNGFKDNVSTHKS 301
R+DEA +LM KM +GF H+
Sbjct: 628 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF---FPDHEC 684
Query: 302 MLK-----------------------------------GLCVVGKFDQAVGYLRNVMEAN 326
LK GLC GK D A + +
Sbjct: 685 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
PD +Y +I+G+ G DEA L EM RGL P + ++NA+ L ++ +DRA
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L ++ Q PN V+YNT+I G C G M L D+MI G + YS L+ G
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKI-GNMDAAFKLKDKMIEEGISPSVVTYSALING 863
Query: 447 YCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRV 480
C+ G++E M++ ++M+ K G KL + T V
Sbjct: 864 LCKHGDIERSMKLLNQMI-KAGVDSKLIEYCTLV 896
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 166/373 (44%), Gaps = 37/373 (9%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G+ A + Q + +YN+LL L RV + A + +H ++K
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 467
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF-DVMT--VKPNLLAYNTMINGFCKKGELEEA 245
V P +V Y+T++ G KM E A ++ D++ + + +NTMI+G CK G++ EA
Sbjct: 468 VAPDEVG-YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ ++M + GC P+ +TY +I G C V +A + M ++ + S++ G
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 586
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L + + L + + P++ +Y +I+G+CK G D+A S EM GL
Sbjct: 587 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 646
Query: 366 VFSFNAVFRILVENGELDRAILLLKQM------PQMDC---------------------- 397
+ + + L G +D A LL+++M P +C
Sbjct: 647 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESC 706
Query: 398 ----LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
LPN + YN I GLC G++ D + G D Y L+ GY GNV
Sbjct: 707 KTFLLPNNIVYNIAIAGLC-KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNV 765
Query: 454 ENVMQIAHEMVTK 466
+ ++ EM+ +
Sbjct: 766 DEAFRLRDEMLRR 778
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 156/339 (46%), Gaps = 5/339 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A+ + ++ L+ NSL+ + I AE ++V N
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+ PD +Y T++ GYC+ G A + D M ++P +L YNT++ G C+ G ++A
Sbjct: 398 L-KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + MM RG P+E+ Y+ ++ GL + A L + GF + T +M+ G
Sbjct: 457 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 516
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +GK +A + + +PD +Y +I+G+CK +A + M + P+
Sbjct: 517 LCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPS 576
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +N++ L ++ L LL +M PN V+Y +I G C +G +
Sbjct: 577 IEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC-KEGMLDKAFSSY 635
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M +G + + + S ++ G G ++ + +MV
Sbjct: 636 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 144/287 (50%), Gaps = 7/287 (2%)
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKG 240
+ +E P V + +++ Y + G+ +NA VFD M P+L + N+++N K G
Sbjct: 148 VYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNG 205
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
E A +M+ G P+ + M+ C +G+VDEA + KM G + N+ T+
Sbjct: 206 ETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYH 265
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S++ G +G + A G L+ + E ++ +V +Y ++I G+CK K DEA +L+ M+
Sbjct: 266 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 325
Query: 361 -GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
L P ++ + G++D A+ LL +M ++ N N++I G C +G +
Sbjct: 326 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC-KRGEIH 384
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E ++ RM+ D Y+ LL GYC EG+ + +M+ +
Sbjct: 385 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 431
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 145/300 (48%), Gaps = 2/300 (0%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G + A + + + A + ++++ L R+ I A ++V
Sbjct: 618 LIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG 677
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
P + IR Y + I ++ + PN + YN I G CK G++++A++
Sbjct: 678 FFPDHECFLKSDIR-YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 736
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ + +G P+ TY +I+G G VDEA L +M G N+ T+ +++ GLC
Sbjct: 737 FSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 796
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
D+A + + + P+V +Y +I+G+CKIG D A L +M G+ P+V +
Sbjct: 797 SENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVT 856
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++A+ L ++G+++R++ LL QM + + Y T++ G + G MQ + L D M
Sbjct: 857 YSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGY-IRSGEMQKIHKLYDMM 915
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 4/215 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN + L + + A FF + + VP D TY T+I GY G ++ A ++ D M
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVP-DNFTYCTLIHGYSAAGNVDEAFRLRDEM 775
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN++ YN +ING CK ++ A++ +++ +G PN +TYN +I G C G +
Sbjct: 776 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 835
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A L KM G +V T+ +++ GLC G ++++ L +++A ++ + Y +
Sbjct: 836 DAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTL 895
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+ G+ + G+ + L M R L T S V
Sbjct: 896 VQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQV 930
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
NV A FH+ Q + +YN+L+ ++ ++ A + ++++E + P V TY
Sbjct: 799 NVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG-ISPSVVTY 857
Query: 198 TTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+ +I G CK G IE + K+ + M V L+ Y T++ G+ + GE+++ K + +MM+
Sbjct: 858 SALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHK-LYDMMH 916
Query: 255 RGC 257
C
Sbjct: 917 IRC 919
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 176/338 (52%), Gaps = 8/338 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IK+ ++ + A+ + Q L++Y +LL L ++N + +HQI++E
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+ P++ Y ++I CK G + +A+ + + + +KP+ Y +MI G+C+ +L+ A
Sbjct: 224 -LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSA 282
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ N M GC PN TY+ +I GLC +GRV+EA +++M +G V T + +
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVA 342
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +G+ + A ++ + P+V +Y +I+G S AI L M G+ P
Sbjct: 343 LCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPN 399
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++NA+ +L+EN E+D A+++ M + CLPN SYN +I G C G + ++
Sbjct: 400 TVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTI-GDTEKAMSML 458
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M++ Y+ ++KGYC+ G+ + +++ M
Sbjct: 459 TNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELM 496
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 153/294 (52%), Gaps = 5/294 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN L+ + + A ++K P V TY +I+GYC G + A +V ++
Sbjct: 437 SYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLV-TYNIIIKGYCDSGDTDVAIRVLEL 495
Query: 220 MTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +P+ +Y +I+GFCK ++E A NEMM+RG PNE+TY A+I G C + +
Sbjct: 496 MKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEK 555
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A ++ +M+ +G + NV T+ ++ GL F A + ++E ++PDV +Y
Sbjct: 556 LDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYST 615
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VING C G A+ + +M G P + +++++ + L + G ++ A + ++ +
Sbjct: 616 VINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQG 675
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+P+ V+Y +I +C+ G++ D + MI +G Y L+KG E
Sbjct: 676 LIPDEVTYVKMI-EVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNE 728
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 169/341 (49%), Gaps = 37/341 (10%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L YNS++ L + +++ AE +++ K + PD TYT+MI GYC+ +++A ++F
Sbjct: 228 LLIYNSVINALCKDGNVRDAESIINKVFKSGM-KPDTFTYTSMILGYCRNRDLDSAFEIF 286
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +PN Y+T+ING C G + EA ++EM G P T+ A I LC
Sbjct: 287 NRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDM 346
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV----VGKFDQ---------AVGY--L 319
GR+++A + M+ G K NV T+ S++ G V +G F + V Y L
Sbjct: 347 GRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNAL 406
Query: 320 RNVMEANMN-----------------PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
NV+ NM P+ SY +I G+C IG +++A+S+L M
Sbjct: 407 MNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRP 466
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
PT+ ++N + + ++G+ D AI +L+ M C P+ SY +I G C +M+
Sbjct: 467 TPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKI-SKMELAS 525
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ + M+ G + Y+ L+ GYC++ ++ ++ M
Sbjct: 526 GMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERM 566
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 172/337 (51%), Gaps = 8/337 (2%)
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
I A D G ++ A F K+ +Y+Y SL+ RV+ ++A FH++ ++ V
Sbjct: 340 IVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG-QRVS--RMAIGLFHRMSRDGV 396
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
VP V TY ++ + I++A VF++M PN +YN +I G+C G+ E+A
Sbjct: 397 VPNTV-TYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAM 455
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ M+ P +TYN +I G C +G D A ++ M+ NG + + ++ ++ G
Sbjct: 456 SMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGF 515
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C + K + A G +M+ + P+ +Y +I+G+CK K D A +L+ M+ G +P V
Sbjct: 516 CKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNV 575
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++N + L + A L K M + P+ V+Y+T+I GLC G + ++ +
Sbjct: 576 QTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLC-NNGAIPLALEMFN 634
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+M++ G + YS L++ +EG VE ++ E+
Sbjct: 635 KMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSEL 671
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 177/362 (48%), Gaps = 8/362 (2%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
SI + K+ K F + +I Y ++ +A F++ + +Y++L+ L
Sbjct: 249 SIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGL 308
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPN 225
+ A +F ++ + V+P V T+T I C MG IE+A K+F M KPN
Sbjct: 309 CNSGRVNEALDFISEMTRHGVLP-TVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPN 367
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+ Y ++I+G + A + M G PN +TYNA++ L N +D A ++
Sbjct: 368 VYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFN 424
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
M +G N S++ +++G C +G ++A+ L N+++ P + +Y ++I G+C G
Sbjct: 425 MMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSG 484
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+D AI +L+ M+A G +P +S+ + + +++ A + +M PN V+Y
Sbjct: 485 DTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYT 544
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+I G C + ++ +++RM RSG + Y+ L+ G ++ N ++ M+
Sbjct: 545 ALISGYCKDE-KLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLE 603
Query: 466 KK 467
+K
Sbjct: 604 EK 605
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/509 (21%), Positives = 202/509 (39%), Gaps = 102/509 (20%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPN--PNPNKYHHTTPCYTAITDVLLSHSLISIAAS 113
N + V+ E AL FN PN + Y+ Y I D + +S+ +
Sbjct: 404 NALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGD---TEKAMSMLTN 460
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+LK + + +IK Y D G+ AI K +SY L+ +++
Sbjct: 461 MLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISK 520
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT------------ 221
++LA F++++ + P +V TYT +I GYCK ++ A ++ + M
Sbjct: 521 MELASGMFNEMMDRGLCPNEV-TYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYN 579
Query: 222 --------------------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
+ P+++ Y+T+ING C G + A + N+M+
Sbjct: 580 VLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKH 639
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
GC PN TY+++I L GRV+EA+ + ++++ G + T+ M++ + GK D+A
Sbjct: 640 GCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRA 699
Query: 316 VGYLRNVMEAN----------------------------------------MNPDVKS-- 333
+L ++ A +N DV S
Sbjct: 700 FDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVL 759
Query: 334 ---------------YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
Y+ +++ + G+ EA +L + M ++ P ++ L+
Sbjct: 760 SSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLR 819
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
++D A+ + K M C + Y +IC LC R ++ + ++M+ N D
Sbjct: 820 ALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLH-RRKEARFVFEKMLSRALNADEI 878
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+++ L+ G G + M+ H M T +
Sbjct: 879 VWTILINGLLGAGYKDLCMEFLHIMETNR 907
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 127/293 (43%), Gaps = 41/293 (13%)
Query: 212 NAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
N +F K L Y T++ K ++++ G +PN L YN++I L
Sbjct: 179 NYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINAL 238
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +G V +A+ ++ K+ +G K + T+ SM+ G C D A + E P+
Sbjct: 239 CKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNA 298
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +ING C G+ +EA+ + EM G+ PTV +F A L + G ++ A +
Sbjct: 299 ATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFID 358
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG----------------HNL 435
M + C PN +Y ++I G +++ + L RM R G N+
Sbjct: 359 MKKKGCKPNVYTYTSLISGQRVSRMAI----GLFHRMSRDGVVPNTVTYNALMNVLMENM 414
Query: 436 D-------FTM------------YSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+ F M Y+ L++GYC G+ E M + M+ KGR
Sbjct: 415 EIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNML--KGR 465
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 110/273 (40%), Gaps = 26/273 (9%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI+A G G V+ A F + K+ +Y ++ V V + A +F +++
Sbjct: 649 SSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMIN 708
Query: 187 ENVVPPDVSTYTTMIRG------YCKMGMIENAKKVF---------DVMTVKPNLLA--- 228
P + TY +I+G Y K+ + NA DV++V + LA
Sbjct: 709 AGC-QPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELD 767
Query: 229 -------YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
Y+ +++ + G EA M+++ PN+ TY + L +VD A
Sbjct: 768 FELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAM 827
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+ M + +++ +K ++ LC + + +A ++ +N D + ++ING
Sbjct: 828 DVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGL 887
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
G D + L M P+ + + R
Sbjct: 888 LGAGYKDLCMEFLHIMETNRRNPSSHARTILAR 920
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 8/183 (4%)
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
M+K + QA+ YL + + +Y ++ K+ + + ++ G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+P + +N+V L ++G + A ++ ++ + P+ +Y ++I G C R +D+
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYC----RNRDL 279
Query: 422 E---DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLT 478
+ ++ +RM G + YS L+ G C G V + EM T+ G L + F
Sbjct: 280 DSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEM-TRHGVLPTVHTFTA 338
Query: 479 RVV 481
+V
Sbjct: 339 PIV 341
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 172/347 (49%), Gaps = 40/347 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L S++SL+GV R + A +F + +VP +V YT +I GYC+ GM+ A ++
Sbjct: 325 LISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNV-IYTILINGYCRNGMMSEALEIR 383
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M + +++AYNT++NG CKK L +A +EM+ RG P+ T+ +I+G C
Sbjct: 384 DKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKE 443
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + +A L M K ++ T+ ++ G C + ++A ++ + P+ SY
Sbjct: 444 GNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISY 503
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL------------ 382
+++NG+C +G EA L EM +G+KPT+ + N V + +G+L
Sbjct: 504 AILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMIS 563
Query: 383 -----------------------DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
D+A L+ +M P+ V+YN I+ G C +GRMQ
Sbjct: 564 EGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFC-RQGRMQ 622
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E ++ +MI G + D + Y+ L+ GY + N++ + EM+ +
Sbjct: 623 EAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQR 669
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 167/309 (54%), Gaps = 9/309 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y G + A+ + K +E G L +YN++L L + + A F ++V+
Sbjct: 366 LINGYCRNGMMSEALEI--RDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVE 423
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
VVP D T+TT+I G+CK G + A +F +MT +KP+++ YN +I+GFCK E+E
Sbjct: 424 RGVVP-DFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEME 482
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + NEM++R PN ++Y ++ G C G V EA L +M G K + T +++
Sbjct: 483 KANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVI 542
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
KG C G +A +L ++ + PD +Y +INGF K D+A L+ +M +GL+
Sbjct: 543 KGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQ 602
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++N + G + A L+L++M + P+ +Y T+I G +++ +++
Sbjct: 603 PDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGY-VSQDNLKEAFR 661
Query: 424 LVDRMIRSG 432
D M++ G
Sbjct: 662 FHDEMLQRG 670
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 43/409 (10%)
Query: 96 TAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG 155
+ ++ V + SLIS++++ + + LI++Y + F ++
Sbjct: 93 SGVSRVEIVESLISMSSTC-----GVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFL 147
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV----------------------VPP- 192
+ + NSLLG LV++ + LA E +++I + + V P
Sbjct: 148 VSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPF 207
Query: 193 -----------DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCK 238
D+ TY T+I YC+ G++ A +V + M+ +KP L YN +ING CK
Sbjct: 208 LIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCK 267
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
KG AK NEM++ G P+ TYN ++ C N EAK + + M G ++ +
Sbjct: 268 KGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLIS 327
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
S++ G DQA+ Y R++ + + PD Y ++ING+C+ G EA+ + +M
Sbjct: 328 FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML 387
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+G V ++N + L + L A L +M + +P+F ++ T+I G C +G M
Sbjct: 388 EQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHC-KEGNM 446
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
L M + D Y+ L+ G+C+ +E ++ +EM+++K
Sbjct: 447 GKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 161/341 (47%), Gaps = 5/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY G + A + L++YN+++ L + A+ F++++
Sbjct: 226 LINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIG 285
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+ PD +TY T++ C+ AK +F M V P+L++++++I + G L++A
Sbjct: 286 L-SPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQA 344
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+M G P+ + Y +I G C NG + EA + KM G +V + ++L G
Sbjct: 345 LMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNG 404
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC A ++E + PD ++ +I+G CK G +A+SL M + +KP
Sbjct: 405 LCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPD 464
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ ++N + + E+++A L +M PN +SY ++ G C G + + L
Sbjct: 465 IVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNL-GFVSEAFRLW 523
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D MIR G + ++KGYC G++ + +M+++
Sbjct: 524 DEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISE 564
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IK Y G++ A + + G +YN+L+ V+ + A F ++
Sbjct: 541 VIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAF-FLINKMETK 599
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ PDV TY ++ G+C+ G ++ A+ + M + P+ Y T+ING+ + L+EA
Sbjct: 600 GLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEA 659
Query: 246 KKCMNEMMNRGCRPNE 261
+ +EM+ RG P++
Sbjct: 660 FRFHDEMLQRGFVPDD 675
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 180/347 (51%), Gaps = 44/347 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM------------------- 200
++N+L+ L R + ++ A ++ V P D +T+TT+
Sbjct: 183 TFNTLMKALCRAHQVRTAVIMLEEMSSRGVAP-DETTFTTLMQGFVEEGSIEAALRVKAR 241
Query: 201 ----------------IRGYCKMGMIENA-----KKVFDVMTVKPNLLAYNTMINGFCKK 239
I GYCK+G +E+A +++ D +P+ + YNT +NG C+
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD--GFEPDQITYNTFVNGLCQN 299
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+ A K M+ M+ G P+ TYN ++ LC NG+++EAK ++ +M G +++T
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ LC + ++A+ R V ++PDV ++ ++IN CK+G A+ L +EM+
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G P ++N + L G+L +A+ LLK M C + ++YNTII GLC K R++
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC-KKMRIE 478
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E++ D+M G + + ++ L+ G C++ +++ ++ ++M+++
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 156/292 (53%), Gaps = 4/292 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N L+ L +V LA F ++ K + PD TY T+I C +G + A +
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 449
Query: 218 DVM--TVKP-NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M T P + + YNT+I+G CKK +EEA++ ++M +G N +T+N +I GLC +
Sbjct: 450 KDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 509
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
++D+A L+ +M G + N T+ S+L C G +A L + DV +Y
Sbjct: 510 KKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTY 569
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ING CK G++ A+ +L+ MR +G++PT ++N V + L + A+ L ++M +
Sbjct: 570 GTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+ P+ ++Y + GLC G +++ D + M+ G +F+ + L +G
Sbjct: 630 VGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 132/277 (47%), Gaps = 36/277 (12%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ + + YN ++N + +++ + +EM RG +P+ +T+N ++ LC +V A
Sbjct: 142 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+++ +M G + +T ++++G G + A+ ++E + + V+ING+
Sbjct: 202 IMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261
Query: 342 CKIGKSDEAISLLKEMRARGLK-----------------------------------PTV 366
CK+G+ ++A+ +++ A G + P V
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
F++N V L +NG+L+ A +L QM CLP+ ++NT+I LC R+++ DL
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN-RLEEALDLAR 380
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ G + D ++ L+ C+ G+ +++ EM
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 141/341 (41%), Gaps = 53/341 (15%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
NI+ + + +P+ AL F N P++ Y + D L S + A LL
Sbjct: 395 NILINALCKVGDPHLALRLFEEMKNSGCTPDEV-----TYNTLIDNLCSLGKLGKALDLL 449
Query: 116 KNSNKL----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
K+ S + +I + ++ A F Q ++N+L+ L +
Sbjct: 450 KDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 509
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLA 228
I A E +Q++ E + P ++ TY +++ YCK G I+ A + + MT + +++
Sbjct: 510 KKIDDAFELINQMISEGLQPNNI-TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRP----------------------------- 259
Y T+ING CK G + A K + M +G RP
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Query: 260 ------NELTYNAMIYGLCINGR-VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ LTY + GLC G + EA M +M GF S+ + + +GL +G
Sbjct: 629 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMD 688
Query: 313 DQAVGYLRNVMEANMNPDVKSYEV-VINGFCKIGKSDEAIS 352
D + + +ME D++ +V I G+ KI K +A++
Sbjct: 689 DYFIRAIEIIME---KVDLRESDVSAIRGYLKIRKFYDALA 726
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 117/294 (39%), Gaps = 56/294 (19%)
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P Y +I L G +D K+L+A+MR G + + S L FD AV
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131
Query: 319 LRNVMEA-------------------------------------NMNPDVKSYEVVINGF 341
+ N ++ + PDV ++ ++
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C+ + A+ +L+EM +RG+ P +F + + VE G ++ A+ + +M +M C
Sbjct: 192 CRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
V+ N +I G C GR++D + + I G D Y+ + G C+ +V + +++
Sbjct: 252 VTVNVLINGYCKL-GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310
Query: 462 EMVT------------------KKGRLLKLKNFLTRVVDALLLMWIVTGGSWIS 497
MV K G+L + K L ++VD L I T + I+
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 203/462 (43%), Gaps = 51/462 (11%)
Query: 48 QFSLCLGSNIVTKVIYEQT---NPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVL-L 103
+F + L N V V+ P A FF WA Y H CY ++ DVL L
Sbjct: 112 KFLIKLSPNFVAFVLKSDAIRGKPDIAFRFFWWAGKQK----NYIHKIECYVSLIDVLSL 167
Query: 104 SHSLISIAASLLKNSNK---LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS 160
S + + K ++ F + LI+++G G V+ ++ + + K+ LY+
Sbjct: 168 SSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYT 227
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N LL LV I+ AE F ++++ + PDV +Y TMI+GYCK G + A + F M
Sbjct: 228 FNFLLNGLVNSMFIESAERVF-EVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDM 286
Query: 221 ---TVKPNLL-----------------------------------AYNTMINGFCKKGEL 242
++P+ + AY+ +I G CK G
Sbjct: 287 EKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRT 346
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E M +GC+ N Y A+I NG V+EA L +M+ GF+ + T+ +
Sbjct: 347 VEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVI 406
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC G+ D+AV Y + + + Y +I+G K G+ DEA +EM RG
Sbjct: 407 VNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGC 466
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+ +NA+ L ++G+++ A++L K+M + C +Y +I GL + R ++
Sbjct: 467 PQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGL-FKEHRNEEAL 525
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L D MI G + L G C G V +I E+
Sbjct: 526 KLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELA 567
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 164/344 (47%), Gaps = 16/344 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+A GN + + + + ++ ++Y+ ++G L + F + K+
Sbjct: 301 LIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKG 360
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+V+ YT +I Y K G + A +F+ M +P+ + Y ++NG CK G L+EA
Sbjct: 361 C-KANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEA 419
Query: 246 KKCMNEMMNRGCRPNELTYNAMIY-----GLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ C+ NE+ NAM Y GL GRVDEA+ +M G + +
Sbjct: 420 VEYF-----EFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYN 474
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ L GK ++A+ + + + + V +Y ++I+G K +++EA+ L M +
Sbjct: 475 ALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDK 534
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+ PT SF A+ L +G++ RA +L ++ M +P ++ +I LC A GR +
Sbjct: 535 GITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPE-TAFEDMINVLCKA-GRTEQ 592
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L D ++ G + + + L+ + GN + M++ H +
Sbjct: 593 ACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHSKI 636
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 40/265 (15%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI AYG GNV AI F ++
Sbjct: 369 TALIDAYGKNGNVNEAI-----------------------------------NLFERMKG 393
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
E P DV TY ++ G CK G ++ A + F+ V N + Y+++I+G K G ++
Sbjct: 394 EGFEPDDV-TYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVD 452
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+K EM+ RGC + YNA+I L +G+++EA +L +M G V T+ ++
Sbjct: 453 EAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILI 512
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GL + ++A+ +++ + P S+ + G C GK A +L E+ G+
Sbjct: 513 SGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVI 572
Query: 364 PTVFSFNAVFRILVENGELDRAILL 388
P +F + +L + G ++A L
Sbjct: 573 PET-AFEDMINVLCKAGRTEQACKL 596
>gi|255660934|gb|ACU25636.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 484
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 219/433 (50%), Gaps = 33/433 (7%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 13 ELVYNVLHGSKKSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCIL 68
Query: 116 KNSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVR 170
+ K D ++ +I +YG G V+ ++ F + +++ + SY++L V++R
Sbjct: 69 LDMPKKGLEWDEDLWVL-MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILR 127
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLL 227
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 128 RGRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLCGKVETANRFFEDMKXREISPDVI 186
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YNTMING+ + ++EEA+K EM R P +TY +I G RVD+A L+ +M
Sbjct: 187 TYNTMINGYYRVKKIEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALTLLEEM 246
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGK 346
+ G K N T+ ++L GLC K +A G L+ +++ + P D + +I+G CK G
Sbjct: 247 KGFGIKPNAITYSTLLPGLCNAEKMSEASGILKEMVDKYIAPKDNSIFLRLISGQCKAGN 306
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQM--------PQ 394
D A +LK M ++ +V + + +L+EN G+ ++AI LL ++ PQ
Sbjct: 307 LDAAADVLKAM----IRLSVPTEAGHYGVLIENYCKAGDYEKAIKLLDKLIEKDIVLRPQ 362
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+YN ++ LC G+ E LV ++++ G D T + L++G+ +EG+ +
Sbjct: 363 SSLHMEPSAYNPLVEYLC-NNGQTAKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPD 420
Query: 455 NVMQIAHEMVTKK 467
+ ++ M+ +K
Sbjct: 421 SAFELLKIMLRRK 433
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 203/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSH-------SLISI--------------AASLLKNSNK 120
+P + + HT Y + L +H +LI I AA L +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMRPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 192/383 (50%), Gaps = 22/383 (5%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G V AA F++ + E + +N+L+ V + A+ +V + PDV T
Sbjct: 336 GRVDAAKDLFYRIPKPE----IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y ++I GY K G++ A +V M KPN+ +Y +++GFCK G+++EA +NEM
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G +PN + +N +I C R+ EA + +M G K +V T S++ GLC V +
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A+ LR+++ + + +Y +IN F + G+ EA L+ EM +G ++N++
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+ L GE+D+A L ++M + P+ +S N +I GLC + G +++ + M+ G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS-GMVEEAVEFQKEMVLRGS 630
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGG 493
D ++ L+ G C G +E+ + + ++ +G F T L+ W+ GG
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKL-QAEGIPPDTVTFNT------LMSWLCKGG 683
Query: 494 SWISRFVFVHQVVVIMERTVEDG 516
FV+ ++++ +EDG
Sbjct: 684 -------FVYDACLLLDEGIEDG 699
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 146/252 (57%), Gaps = 4/252 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+N L+ + + I A E F ++ ++ PDV T+ ++I G C++ I++A +
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGC-KPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V N + YNT+IN F ++GE++EA+K +NEM+ +G +E+TYN++I GLC G
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A+ L KM +G + + ++ GLC G ++AV + + ++ PD+ ++
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING C+ G+ ++ +++ ++++A G+ P +FN + L + G + A LLL + +
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Query: 397 CLPNFVSYNTII 408
+PN +++ ++
Sbjct: 700 FVPNHRTWSILL 711
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 164/311 (52%), Gaps = 10/311 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN +L +LV N K+A F+ ++ +PP + T+ +++ +C + I++A +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRK-IPPTLFTFGVVMKAFCAVNEIDSALSLLRD 242
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT PN + Y T+I+ K + EA + + EM GC P+ T+N +I GLC R
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EA ++ +M + GF + T+ ++ GLC +G+ D A +++ P++ +
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNT 358
Query: 337 VINGFCKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+GF G+ D+A ++L +M + G+ P V ++N++ + G + A+ +L M
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C PN SY ++ G C G++ + ++++ M G + ++CL+ +C+E +
Sbjct: 419 GCKPNVYSYTILVDGFCKL-GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 456 VMQIAHEMVTK 466
++I EM K
Sbjct: 478 AVEIFREMPRK 488
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 131/259 (50%), Gaps = 4/259 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A+ + A+ F + + +Y++NSL+ L V+ IK A ++ E
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEEA 245
VV V TY T+I + + G I+ A+K+ + M + + L YN++I G C+ GE+++A
Sbjct: 525 VVANTV-TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M+ G P+ ++ N +I GLC +G V+EA +M L G ++ T S++ G
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ + + R + + PD ++ +++ CK G +A LL E G P
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Query: 366 VFSFNAVFRILVENGELDR 384
+++ + + ++ LDR
Sbjct: 704 HRTWSILLQSIIPQETLDR 722
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 144/315 (45%), Gaps = 19/315 (6%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF--- 217
Y L+G L K + Q+ E +V + S + +++R Y K G ++
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKE-SLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 218 -DVMTVKPNLLAYNT----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+V + +P +YN +++G C K A +M++R P T+ ++ C
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHK----VAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+D A L+ M +G N +++++ L + ++A+ L + PD +
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
++ VI G CK + +EA ++ M RG P ++ + L + G +D A L ++
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS-GHNLDFTMYSCLLKGYCEEG 451
P+ P V +NT+I G + GR+ D + ++ M+ S G D Y+ L+ GY +EG
Sbjct: 349 PK----PEIVIFNTLIHGF-VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 452 NVENVMQIAHEMVTK 466
V +++ H+M K
Sbjct: 404 LVGLALEVLHDMRNK 418
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
T Y + + L I A L+ + L + + LIK G V A F
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ + + S N L+ L R ++ A EF ++V P D+ T+ ++I G C+
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP-DIVTFNSLINGLCRA 647
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G IE+ +F + + P+ + +NT+++ CK G + +A ++E + G PN T+
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 265 NAMIYGLCINGRVDEAKMLMA 285
+ ++ + +D + A
Sbjct: 708 SILLQSIIPQETLDRRRFYNA 728
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 169/310 (54%), Gaps = 5/310 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ + I+ A++ F ++ K +V + TYT +I G K G+ + ++++ M
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEW-TYTVLIHGLFKNGIKKQGFEMYEKM 259
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V PNL YN ++N CK G ++A K +EM RG N +TYN +I GLC +
Sbjct: 260 QEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKA 319
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA +M +M+ N+ T+ +++ G C VGK +A+ R++ ++P + +Y V+
Sbjct: 320 NEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVL 379
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++GFC+ G + A ++KEM RG+KP+ ++ + + ++ AI L M ++
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGL 439
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ +Y+ +I G C+ KG+M + L M+ + +Y+ ++ GYC+EG+ +
Sbjct: 440 VPDVHTYSVLIHGFCI-KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 458 QIAHEMVTKK 467
++ +M K+
Sbjct: 499 RLFRDMEEKE 508
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 148/278 (53%), Gaps = 5/278 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+YN ++ L + K A + F ++ +E V ++ TY T+I G C+ A KV
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFKVFDEM-RERGVSCNIVTYNTLIGGLCREMKANEANKVM 326
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M + PNL+ YNT+I+GFC G+L +A ++ +RG P+ +TYN ++ G C
Sbjct: 327 DQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRK 386
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G A ++ +M G K + T+ ++ + A+ ++ E + PDV +Y
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTY 446
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+I+GFC G+ +EA L K M + L+P +N + + G RA+ L + M +
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEE 506
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ PN SY+ +I LC + ++++ EDLV++MI SG
Sbjct: 507 KELAPNVASYSYLIRVLCKER-KLKEAEDLVEKMIDSG 543
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 180/390 (46%), Gaps = 27/390 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN--SNKL-SDFFISKLIKAYGDRGN 138
+PN + + HT + + +LLS +L S A SLL S K+ S FF S
Sbjct: 29 SPNFHGFQHTHESISILLRLLLSGNLYSHAQSLLLQVISGKIQSQFFTSS---------- 78
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPP-----D 193
+ + + +++ + + LY ++ V+ S+ + +F+++V + VP +
Sbjct: 79 --SLLHYLTESETSKTKSRLYEV--IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNN 134
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ T+ + + N K+ V+ V ++ +I G C+ GE+E++ + E+
Sbjct: 135 LLTFVVGSSSFNQWWCFFNESKIKVVLDV----YSFGIVIKGCCEAGEIEKSFDLLVELR 190
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G PN + Y +I G C G +++AK L +M G N T+ ++ GL G
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK 250
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
Q + E + P++ +Y V+N CK G++ +A + EMR RG+ + ++N +
Sbjct: 251 QGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLI 310
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L + + A ++ QM PN ++YNT+I G C + G++ L + G
Sbjct: 311 GGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFC-SVGKLGKALSLCRDLKSRGL 369
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ Y+ L+ G+C +G+ ++ EM
Sbjct: 370 SPSLVTYNVLVSGFCRKGDTSGAAKMVKEM 399
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 39/267 (14%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G K A F + ++ + +YN+L+G L R A + Q+ K V+ P++ T
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM-KSYVINPNLIT 340
Query: 197 YTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y T+I G+C +G + A + + P+L+ YN +++GFC+KG+ A K + EM
Sbjct: 341 YNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEME 400
Query: 254 NRGCRPNELTY-----------------------------------NAMIYGLCINGRVD 278
RG +P+++TY + +I+G CI G+++
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EA L M + N + +M+ G C G +A+ R++ E + P+V SY +I
Sbjct: 461 EASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLI 520
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPT 365
CK K EA L+++M G+ P+
Sbjct: 521 RVLCKERKLKEAEDLVEKMIDSGIDPS 547
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 227/498 (45%), Gaps = 61/498 (12%)
Query: 13 QIPDQSILVTSITSVIQRLNPQNPSPK------NISSQPLDQFSLCLGSNIVTKVIYEQT 66
+ P+QS L+ S+ S++ NP S K ++S DQ L +GSN V
Sbjct: 53 KAPNQS-LINSVFSILS--NPSFDSSKSKQLLLHLSPHEFDQCFLAIGSNNV-------- 101
Query: 67 NPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAA---SLLKN-----S 118
NP A FF++AS P + H + SLL N S
Sbjct: 102 NPRTAFNFFHFASETLFEPAVAVTVVDLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPS 161
Query: 119 NKLSDFFISKLIKA-------------------------------YGDRGNVKAAIFWFH 147
K +F +S L+KA + G V AI F
Sbjct: 162 LKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFR 221
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ +++ + +YN+++ L + + A +F ++ KE V P + TY +I G K+
Sbjct: 222 KMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERV-KPSLVTYGVLINGLVKL 280
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
+ A + M+ + PN + YNT+I+G+C+ G + A + ++M++ G PN +T
Sbjct: 281 ERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTC 340
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N++I G C + +++ A+ L+ +M G N T S++ LC+ +FD A+ ++ ++
Sbjct: 341 NSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLL 400
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
N P+ ++++G C+ GK EAI L + +G + NA+ L E G +
Sbjct: 401 RNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEE 460
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A LLK+M + + + +SYNT+I C +G++++ L + M+R G D Y+ LL
Sbjct: 461 AAKLLKEMLERGLVLDSISYNTLILACC-KEGKVEEGFKLKEEMVRRGIQPDMYTYNMLL 519
Query: 445 KGYCEEGNVENVMQIAHE 462
G C G +E + HE
Sbjct: 520 HGLCNMGKIEEAGGLWHE 537
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+YN LL L + I+ A +H+ K+N PD TY MI GYCK +E +K+F
Sbjct: 512 MYTYNMLLHGLCNMGKIEEAGGLWHE-CKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLF 570
Query: 218 D---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++ N + Y T+I +C+ G + EA + ++M +RG TY+++I+GL
Sbjct: 571 QEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNI 630
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G VD A L+ +MR G NV + +++ G C +G+ + L+ + N++P+ +Y
Sbjct: 631 GLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITY 690
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++ING CK+G A LL EM +G+ P ++NA+ + G+++ A+ + M
Sbjct: 691 TIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMST 750
Query: 395 MDCLPNFVSYNTIICG 410
+ ++Y T+I G
Sbjct: 751 GGISLDDITYTTLIDG 766
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 144/291 (49%), Gaps = 5/291 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN+L+ + ++ + ++V+ + PD+ TY ++ G C MG IE A ++
Sbjct: 479 SYNTLILACCKEGKVEEGFKLKEEMVRRGI-QPDMYTYNMLLHGLCNMGKIEEAGGLWHE 537
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
P+ Y MI+G+CK +EE +K EM+ N + Y +I C NG
Sbjct: 538 CKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGN 597
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L MR G +T+ S++ GL +G D A L + + ++P+V Y
Sbjct: 598 MREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTA 657
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G+CK+G+ + S+L+EM + P ++ + + G + A LL +M Q
Sbjct: 658 LIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKG 717
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+P+ V+YN + G C +G+M++ + D M G +LD Y+ L+ G+
Sbjct: 718 IVPDAVTYNALTNGFC-KEGKMEEALKVCDLMSTGGISLDDITYTTLIDGW 767
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 176/364 (48%), Gaps = 8/364 (2%)
Query: 106 SLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
+L+ I LL+N K +D ++ L+ G AI +++ + A + N+L+
Sbjct: 391 ALLFIMEMLLRNF-KPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALI 449
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---V 222
L S + A + ++++ +V +S Y T+I CK G +E K+ + M +
Sbjct: 450 HGLCEAGSKEEAAKLLKEMLERGLVLDSIS-YNTLILACCKEGKVEEGFKLKEEMVRRGI 508
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P++ YN +++G C G++EEA +E G P+ TY MI G C RV+E +
Sbjct: 509 QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEK 568
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK-SYEVVINGF 341
L +M + N + ++++ C G +A LR+ M + P +Y +I+G
Sbjct: 569 LFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAF-RLRDDMRSRGIPQTSATYSSLIHGL 627
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
IG D A LL EMR GL P V + A+ + G++ + +L++M + PN
Sbjct: 628 SNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNK 687
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
++Y +I G C G M+ L++ M + G D Y+ L G+C+EG +E +++
Sbjct: 688 ITYTIMINGHCKL-GNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCD 746
Query: 462 EMVT 465
M T
Sbjct: 747 LMST 750
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 153/293 (52%), Gaps = 5/293 (1%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMI 233
A E +++++++ V T +I G C+ G E A K+ M + +L +YNT+I
Sbjct: 426 AIELWYRLLEKGFAANTV-TSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLI 484
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
CK+G++EE K EM+ RG +P+ TYN +++GLC G+++EA L + + NG
Sbjct: 485 LACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNF 544
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ T+ M+ G C + ++ + ++ + + Y +I +C+ G EA L
Sbjct: 545 PDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRL 604
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
+MR+RG+ T +++++ L G +D A LL +M + PN V Y +I G C
Sbjct: 605 RDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCK 664
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G+M V+ ++ M + + + Y+ ++ G+C+ GN++ ++ +EM K
Sbjct: 665 L-GQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQK 716
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 144/278 (51%), Gaps = 4/278 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
P + T ++ K ++ + +VFD+M V P++ ++TM+N FC G +++A +
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIEL 219
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+M G PN +TYN +I+GLC NGR+DEA KM K ++ T+ ++ GL
Sbjct: 220 FRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVK 279
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+ +FD+A L+ + + P+ Y +I+G+C+IG A+ + +M + G+ P +
Sbjct: 280 LERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVT 339
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
N++ + ++ +++ A LL++M + N ++ ++I LC+ K R + M
Sbjct: 340 CNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCL-KCRFDSALLFIMEM 398
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + + + L+ G C+ G +++ + ++ K
Sbjct: 399 LLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEK 436
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 1/217 (0%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
+ N+G P+ T N ++ L V + + M G +V +M+ C G+
Sbjct: 153 LANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGR 212
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A+ R + + + P+V +Y +I+G CK G+ DEA ++M +KP++ ++
Sbjct: 213 VDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGV 272
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ LV+ D A +LK+M PN V YNT+I G C G + + D MI +
Sbjct: 273 LINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRI-GNISTALQIRDDMISN 331
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
G + + + L++GYC+ +E+ + EM+T G
Sbjct: 332 GISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGG 368
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 112/252 (44%), Gaps = 37/252 (14%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + G ++ A +H+ K+ N Y+Y ++ + N ++ E+ F ++V
Sbjct: 518 LLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMK 577
Query: 189 V----------------------------------VPPDVSTYTTMIRGYCKMGMIENAK 214
+ +P +TY+++I G +G++++A
Sbjct: 578 IEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSAN 637
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++ D M + PN++ Y +I G+CK G++ + + EM PN++TY MI G
Sbjct: 638 QLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGH 697
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G + A L+ +M G + T+ ++ G C GK ++A+ + ++ D
Sbjct: 698 CKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDD 757
Query: 332 KSYEVVINGFCK 343
+Y +I+G+ K
Sbjct: 758 ITYTTLIDGWHK 769
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 167/307 (54%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++G L + LA + Q++ +N P V TYT +I G ++ A K+ D
Sbjct: 191 TYNIMIGSLCSRGKLDLALKVLDQLLSDNC-QPTVITYTILIEATMLEGGVDEALKLLDE 249
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KP++ YNT+I G CK+G ++ A + + + +GC P+ ++YN ++ L G+
Sbjct: 250 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGK 309
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+E + LM KM NV T+ ++ LC GK ++A+ L+ + E + PD SY+
Sbjct: 310 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 369
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I FC+ G+ D AI L+ M + G P + ++N V L +NG+ D+A+ + ++ ++
Sbjct: 370 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 429
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C PN SYNT+ L + +++ + ++ M+ +G + D Y+ ++ C EG V+
Sbjct: 430 CSPNSSSYNTMFSALWSSGDKIRALH-MILEMVSNGIDPDEITYNSMISCLCREGMVDKA 488
Query: 457 MQIAHEM 463
++ +M
Sbjct: 489 FELLVDM 495
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 148/278 (53%), Gaps = 4/278 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+ E PDV Y +I G+CKM I++A +V D M K P+ + YN MI C +G+
Sbjct: 145 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 204
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L+ A K ++++++ C+P +TY +I + G VDEA L+ +M G K ++ T+ +
Sbjct: 205 LDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNT 264
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+++G+C G D+A +RN+ PDV SY +++ GK +E L+ +M +
Sbjct: 265 IIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 324
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P V +++ + L +G+++ A+ LLK M + P+ SY+ +I C +GR+
Sbjct: 325 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC-REGRLDVA 383
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ ++ MI G D Y+ +L C+ G + ++I
Sbjct: 384 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 421
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 167/330 (50%), Gaps = 44/330 (13%)
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAY 229
++KL +E + +K PD+ TY T+IRG CK GM++ A ++ + +K P++++Y
Sbjct: 243 ALKLLDEMLSRGLK-----PDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISY 297
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N ++ +G+ EE +K M +M + C PN +TY+ +I LC +G+++EA L+ M+
Sbjct: 298 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 357
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G + ++ ++ C G+ D A+ +L ++ PD+ +Y V+ CK GK+D+
Sbjct: 358 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 417
Query: 350 AISLLK-----------------------------------EMRARGLKPTVFSFNAVFR 374
A+ + EM + G+ P ++N++
Sbjct: 418 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMIS 477
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L G +D+A LL M + P+ V+YN ++ G C A R++D D++D M+ +G
Sbjct: 478 CLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH-RIEDAIDVLDSMVGNGCR 536
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ T Y+ L++G G M++A+++V
Sbjct: 537 PNETTYTVLIEGIGFAGYRAEAMELANDLV 566
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 150/276 (54%), Gaps = 3/276 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTV--KPNLLAYNTMINGFCKKGELEEAKKCM 249
PDV T +I+G+ + + A +V +++ +P++ AYN +INGFCK +++A + +
Sbjct: 118 PDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVL 177
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+ M ++ P+ +TYN MI LC G++D A ++ ++ + + V T+ +++ +
Sbjct: 178 DRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLE 237
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G D+A+ L ++ + PD+ +Y +I G CK G D A +++ + +G +P V S+
Sbjct: 238 GGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISY 297
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + R L+ G+ + L+ +M C PN V+Y+ +I LC G++++ +L+ M
Sbjct: 298 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC-RDGKIEEAMNLLKLMK 356
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
G D Y L+ +C EG ++ ++ M++
Sbjct: 357 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 392
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 8/222 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+ L+ L R I+ A +++KE + PD +Y +I +C+ G ++ A + +
Sbjct: 331 TYSILITTLCRDGKIEEAMNLL-KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 389
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P+++ YNT++ CK G+ ++A + ++ GC PN +YN M L +G
Sbjct: 390 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 449
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
A ++ +M NG + T+ SM+ LC G D+A L ++ +P V +Y +
Sbjct: 450 KIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNI 509
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
V+ GFCK + ++AI +L M G +P + +L+E
Sbjct: 510 VLLGFCKAHRIEDAIDVLDSMVGNGCRPN----ETTYTVLIE 547
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 52/243 (21%)
Query: 291 GFKDNVSTHKSMLKGL---CVVGKFDQAVGYLRNVMEANMNPDVK--------------- 332
GF+D MLK C G + +++ L ++ NPDV
Sbjct: 82 GFRDT-----QMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNV 136
Query: 333 -------------------SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+Y +INGFCK+ + D+A +L MR++ P ++N +
Sbjct: 137 PKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI 196
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L G+LD A+ +L Q+ +C P ++Y TI+ M +G + + L+D M+ G
Sbjct: 197 GSLCSRGKLDLALKVLDQLLSDNCQPTVITY-TILIEATMLEGGVDEALKLLDEMLSRGL 255
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDA-LLLMWIVTG 492
D Y+ +++G C+EG V+ A EM+ R L+LK V+ +LL ++
Sbjct: 256 KPDMFTYNTIIRGMCKEGMVDR----AFEMI----RNLELKGCEPDVISYNILLRALLNQ 307
Query: 493 GSW 495
G W
Sbjct: 308 GKW 310
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 6/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ Y +++ L + + AE F +I+K + D T+++ G+C+ + +A KVF
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLL-DSHIVTSLLLGFCRGLNLRDALKVF 253
Query: 218 DVM----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
D+M T PN ++Y+ +I+G C+ G LEEA ++M +GC+P+ TY +I LC
Sbjct: 254 DLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD 313
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G +D+A L +M G K NV T+ ++ GLC GK ++A G R +++ + P V +
Sbjct: 314 RGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVIT 373
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +ING+CK G+ A LL M R KP V +FN + L G+ +A+ LLK+M
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
P+ VSYN +I GLC +G M L+ M D ++ ++ +C++G
Sbjct: 434 DNGLSPDIVSYNVLIDGLC-REGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKA 492
Query: 454 E 454
+
Sbjct: 493 D 493
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 171/338 (50%), Gaps = 17/338 (5%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVR 170
+LK L ++ L+ + N++ A+ F + G C SY+ L+ L
Sbjct: 221 ILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSR--EGTCAPNSVSYSILIHGLCE 278
Query: 171 VNSIKLAEEF-FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNL 226
V +L E F + E P TYT +I+ C G+I+ A +FD M KPN+
Sbjct: 279 VG--RLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNV 336
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
Y +I+G C+ G++EEA +M+ G P+ +TYNA+I G C +GRV A L+
Sbjct: 337 HTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTV 396
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M K NV T +++GLC VGK +AV L+ +++ ++PD+ SY V+I+G C+ G
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
+ A LL M + L+P +F A+ + G+ D A L M + + V+ T
Sbjct: 457 MNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 407 IICGLCMAKGRMQD----VEDLVD-RMIRSGHNLDFTM 439
+I G+C G+ +D +E LV RM+ + H+L+ +
Sbjct: 517 LIDGVCNV-GKTRDALFILETLVKMRMLTTPHSLNVIL 553
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 172/376 (45%), Gaps = 40/376 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIKA DRG + A F + +++Y L+ L R I+ A ++VK+
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDG 366
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------------------- 221
+ P V TY +I GYCK G + A ++ VM
Sbjct: 367 IFP-SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 222 -----------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+ P++++YN +I+G C++G + A K + M + P+ LT+ A+I
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINA 485
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C G+ D A + M G + T +++ G+C VGK A+ L +++ M
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTT 545
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
S V+++ K K E +++L ++ GL P+V ++ + L+ +G++ + +L+
Sbjct: 546 PHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLE 605
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
M CLPN Y II GLC GR+++ E L+ M SG + + Y+ ++KGY
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQF-GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 451 GNVENVMQIAHEMVTK 466
G ++ ++ MV +
Sbjct: 665 GKLDRALETVRAMVER 680
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 170/387 (43%), Gaps = 52/387 (13%)
Query: 95 YTAITDVLLSHSLISIAAS----LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
+TAI + +A++ +L+ L + + LI + G + A+F
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLV 538
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
++ +S N +L +L + KL EE M+ K+G++
Sbjct: 539 KMRMLTTPHSLNVILDMLSK--GCKLKEEL------------------AMLGKINKLGLV 578
Query: 211 ENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
P+++ Y T+++G + G++ + + + M GC PN Y +I G
Sbjct: 579 -------------PSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIING 625
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC GRV+EA+ L++ M+ +G N T+ M+KG GK D+A+ +R ++E +
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELN 685
Query: 331 VKSYEVVINGFC----KIGKSD-----EAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ Y ++ GF I ++D E IS+++++ +F + L + G
Sbjct: 686 DRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIF----LVTRLCKEGR 741
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
D + L++ + + + + I+ C K + VE L+ +++SG F +
Sbjct: 742 TDESNGLVQTILKSGVFLE-KAIDIIMESYCSKKKHTKCVE-LITLVLKSGFVPSFKSFC 799
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKG 468
+++G +EG+ E ++ E++T G
Sbjct: 800 LVIQGLKKEGDTERARELVMELLTSNG 826
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 237 CKKGELEEAK--KCMNEMMN-RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
C + E E K C +E+ G R N Y++++ L A + +M +GF
Sbjct: 133 CSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFV 192
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ +++++ LC G + A ++ +++ D ++ GFC+ +A+ +
Sbjct: 193 VGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKV 252
Query: 354 LKEMRARG-LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
M G P S++ + L E G L+ A L QM + C P+ +Y +I LC
Sbjct: 253 FDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC 312
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+G + +L D MI G + Y+ L+ G C +G +E + +MV
Sbjct: 313 -DRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 12/184 (6%)
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD-----VKSYEVVINGFCK 343
++GF+ N + S+L L K D +G+L V M D + Y ++N CK
Sbjct: 153 VSGFRLNYPCYSSLLMSL---AKLD--LGFLAYVTYRRMEADGFVVGMIDYRTIVNALCK 207
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP-QMDCLPNFV 402
G ++ A + ++ G ++ L A+ + M + C PN V
Sbjct: 208 NGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSV 267
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
SY+ +I GLC GR+++ L D+M G Y+ L+K C+ G ++ + E
Sbjct: 268 SYSILIHGLCEV-GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326
Query: 463 MVTK 466
M+ +
Sbjct: 327 MIAR 330
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 180/347 (51%), Gaps = 44/347 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM------------------- 200
++N+L+ L R + ++ A ++ V P D +T+TT+
Sbjct: 91 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAP-DETTFTTLMQGFVEEGSIEAALRVKAR 149
Query: 201 ----------------IRGYCKMGMIENA-----KKVFDVMTVKPNLLAYNTMINGFCKK 239
I GYCK+G +E+A +++ D +P+ + YNT +NG C+
Sbjct: 150 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD--GFEPDQITYNTFVNGLCQN 207
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+ A K M+ M+ G P+ TYN ++ LC NG+++EAK ++ +M G +++T
Sbjct: 208 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 267
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ LC + ++A+ R V ++PDV ++ ++IN CK+G A+ L +EM+
Sbjct: 268 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 327
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G P ++N + L G+L +A+ LLK M C + ++YNTII GLC K R++
Sbjct: 328 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC-KKMRIE 386
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E++ D+M G + + ++ L+ G C++ +++ ++ ++M+++
Sbjct: 387 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 433
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 156/292 (53%), Gaps = 4/292 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N L+ L +V LA F ++ K + PD TY T+I C +G + A +
Sbjct: 299 VYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 357
Query: 218 DVM--TVKP-NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M T P + + YNT+I+G CKK +EEA++ ++M +G N +T+N +I GLC +
Sbjct: 358 KDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 417
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
++D+A L+ +M G + N T+ S+L C G +A L + DV +Y
Sbjct: 418 KKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTY 477
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ING CK G++ A+ +L+ MR +G++PT ++N V + L + A+ L ++M +
Sbjct: 478 GTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 537
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+ P+ ++Y + GLC G +++ D + M+ G +F+ + L +G
Sbjct: 538 VGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 589
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 132/277 (47%), Gaps = 36/277 (12%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ + + YN ++N + +++ + +EM RG +P+ +T+N ++ LC +V A
Sbjct: 50 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 109
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+++ +M G + +T ++++G G + A+ ++E + + V+ING+
Sbjct: 110 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 169
Query: 342 CKIGKSDEAISLLKEMRARGLK-----------------------------------PTV 366
CK+G+ ++A+ +++ A G + P V
Sbjct: 170 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 229
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
F++N V L +NG+L+ A +L QM CLP+ ++NT+I LC R+++ DL
Sbjct: 230 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN-RLEEALDLAR 288
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ G + D ++ L+ C+ G+ +++ EM
Sbjct: 289 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 325
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 141/341 (41%), Gaps = 53/341 (15%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
NI+ + + +P+ AL F N P++ Y + D L S + A LL
Sbjct: 303 NILINALCKVGDPHLALRLFEEMKNSGCTPDEV-----TYNTLIDNLCSLGKLGKALDLL 357
Query: 116 KNSNKL----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
K+ S + +I + ++ A F Q ++N+L+ L +
Sbjct: 358 KDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 417
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLA 228
I A E +Q++ E + P ++ TY +++ YCK G I+ A + + MT + +++
Sbjct: 418 KKIDDAFELINQMISEGLQPNNI-TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 476
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRP----------------------------- 259
Y T+ING CK G + A K + M +G RP
Sbjct: 477 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 536
Query: 260 ------NELTYNAMIYGLCINGR-VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ LTY + GLC G + EA M +M GF S+ + + +GL +G
Sbjct: 537 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMD 596
Query: 313 DQAVGYLRNVMEANMNPDVKSYEV-VINGFCKIGKSDEAIS 352
D + + +ME D++ +V I G+ KI K +A++
Sbjct: 597 DYFIRAIEIIME---KVDLRESDVSAIRGYLKIRKFYDALA 634
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 56/272 (20%)
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA--------------- 325
K+L+A+MR G + + S L FD AV + N ++
Sbjct: 2 KVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLL 61
Query: 326 ----------------------NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+ PDV ++ ++ C+ + A+ +L+EM +RG+
Sbjct: 62 NVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVA 121
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +F + + VE G ++ A+ + +M +M C V+ N +I G C GR++D
Sbjct: 122 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL-GRVEDALG 180
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT------------------ 465
+ + I G D Y+ + G C+ +V + +++ MV
Sbjct: 181 YIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 240
Query: 466 KKGRLLKLKNFLTRVVDALLLMWIVTGGSWIS 497
K G+L + K L ++VD L I T + I+
Sbjct: 241 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 272
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 221/437 (50%), Gaps = 33/437 (7%)
Query: 52 CLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA 111
C +V V++ N HAL FF W N + H + I ++L S ++ A
Sbjct: 9 CFDHELVYNVLHGAKNAEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHA 64
Query: 112 ASLLKNSNKLS-----DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLG 166
+L + K D ++ +I +YG G V+ ++ F + +++ + SY++L
Sbjct: 65 RCILLDMPKKGLEWDXDMWVL-MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFK 123
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVK 223
V++R +A+ +F++++ E + P T+ MI G+ G +E A + F+ M +
Sbjct: 124 VILRRGRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREIS 182
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ YNTMING+ + ++EEA+K EM + PN +TY +I G +VD+A L
Sbjct: 183 PDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRL 242
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFC 342
+ +M+ G K N T+ ++L GLC K +A L+ +++ + P D + +I+ C
Sbjct: 243 VEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKYIAPTDNSIFMRLISSQC 302
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL 398
K G D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D +
Sbjct: 303 KAGNLDAAADVLKAM----IRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDII 358
Query: 399 --PNFV------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
P +YN +I LC G+ E LV ++++ G D T + L++G+ E
Sbjct: 359 LRPQSTLHMEPSAYNXMIEYLC-NNGQXAKAETLVRQLLKLGVQ-DPTALNTLIRGHSRE 416
Query: 451 GNVENVMQIAHEMVTKK 467
G+ ++ ++ M+ +K
Sbjct: 417 GSPDSAFELLKIMLRRK 433
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNXMIEYLCNNGQXAKAETLVRQLLKLGVQDP--TALNTLIRGHSREGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AY++++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYDSLVQSYLKKSEPXDAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 179/346 (51%), Gaps = 13/346 (3%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
+ +S L +A G G A + K + +G ++Y+ L L R K F
Sbjct: 270 NVLLSGLCRA-GRMGETSALLDEMASQKMVPDG---FTYSILFDGLSRNGDSKAMLSLFG 325
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
+ +K V D T + ++ G CK G + A++V + + P + YNT+ING+C+
Sbjct: 326 KSLKNGVTIGDY-TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 384
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
GELE A +M +R +P+ +TYNA+I GLC R+ A+ L+ +M+ NG V T
Sbjct: 385 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 444
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G+ ++ L + E + P+V SY ++N FCK GK EA+++L +M
Sbjct: 445 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 504
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+ + P +NA+ VE+G D+A +L+++M P+ V+YN +I GLC + ++
Sbjct: 505 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC-NQSQIS 563
Query: 420 DVEDLVDRMIRSGHNL--DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ E++++ + S H L D Y+ L+ C GN++ + + M
Sbjct: 564 EAEEIINSL--SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 607
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 147/308 (47%), Gaps = 4/308 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+++N + V + A ++ ++ PP+ +Y +I G + G +A +VFD
Sbjct: 161 FAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFD 220
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
MT V PN + YNTMI+G K G+LE ++M+ G +PN +TYN ++ GLC G
Sbjct: 221 EMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAG 280
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R+ E L+ +M + T+ + GL G + ++ + +
Sbjct: 281 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCS 340
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++NG CK GK A +L+ + GL PT +N + + GEL+ A QM
Sbjct: 341 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 400
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ ++YN +I GLC A+ R+ + +DL+ M +G N ++ L+ Y G +E
Sbjct: 401 HIKPDHITYNALINGLCKAE-RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 459
Query: 456 VMQIAHEM 463
+ EM
Sbjct: 460 CFIVLSEM 467
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 158/313 (50%), Gaps = 5/313 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G ++ A F Q K +YN+L+ L + I A++ ++ ++N
Sbjct: 377 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM-QDN 435
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V P V T+ T+I Y + G +E V M +KPN+++Y +++N FCK G++ EA
Sbjct: 436 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 495
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+++M ++ PN YNA+I +G D+A +L+ KM+ NG ++ T+ ++KG
Sbjct: 496 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 555
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + +A + ++ + PD SY +I+ C G D+A+ L + M G+K T
Sbjct: 556 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 615
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V +++ + L G L L ++M Q + +P+ +N ++ ++ EDL
Sbjct: 616 VRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIK-AEDLR 674
Query: 426 DRMIRSGHNLDFT 438
M++ +N D T
Sbjct: 675 KEMLQKRNNHDDT 687
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 175/372 (47%), Gaps = 17/372 (4%)
Query: 105 HSLISIAASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYS 160
H+ + A +L ++ D F +K ++A G++ A+ + + +GA +S
Sbjct: 141 HADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGR--DGAPPPNAFS 198
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ + R A E F ++ + V+P + TY TMI G+ K G +E + D M
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHI-TYNTMIDGHIKGGDLEAGFSLRDQM 257
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+KPN + YN +++G C+ G + E ++EM ++ P+ TY+ + GL NG
Sbjct: 258 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 317
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
L K NG T +L GLC GK A L++++ A + P Y +
Sbjct: 318 KAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 377
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
ING+C+ G+ + A S +M++R +KP ++NA+ L + + A LL +M
Sbjct: 378 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 437
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P ++NT+I A GR +E ++ M +G + Y ++ +C+ G +
Sbjct: 438 NPTVETFNTLI----DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 493
Query: 455 NVMQIAHEMVTK 466
+ I +M K
Sbjct: 494 EAVAILDDMFHK 505
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 106/242 (43%), Gaps = 2/242 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+L + N ++ G + ++ + + G RP+ +N + G + EA +
Sbjct: 123 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 182
Query: 284 MAKMRLNGF-KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
+ +M +G N ++ ++ G+ G+ AV + E + P+ +Y +I+G
Sbjct: 183 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 242
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K G + SL +M GLKP ++N + L G + LL +M +P+
Sbjct: 243 KGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 302
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+Y+ + GL G + + L + +++G + S LL G C++G V ++
Sbjct: 303 TYSILFDGLSR-NGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 361
Query: 463 MV 464
+V
Sbjct: 362 LV 363
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP-TVFSFNAVFRILVENG 380
+ A PD ++ + G EA+ +L+ M G P FS+N V + G
Sbjct: 151 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 210
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
A+ + +M + LPN ++YNT+I G + G ++ L D+M+ G + Y
Sbjct: 211 RGGDAVEVFDEMTERAVLPNHITYNTMIDGH-IKGGDLEAGFSLRDQMVCHGLKPNAITY 269
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ LL G C G + + EM ++K
Sbjct: 270 NVLLSGLCRAGRMGETSALLDEMASQK 296
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 169/314 (53%), Gaps = 6/314 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y ++ L + A + F +++ ++P DV Y++++ G C+ G ++ A + F
Sbjct: 146 VFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILP-DVVVYSSLMDGLCRFGRLKEALEFF 204
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + ++ YN++I+G + G +E +N M++RG P+ T+ +I GLC
Sbjct: 205 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 264
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+V EA+ ++ M G + ++ T+ +++ GLC+VG+ + A ++ + + +V SY
Sbjct: 265 GKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 324
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++ING+CK K DEA L +EMR +GLKP+ ++N + L ++G + A L +M
Sbjct: 325 NILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 384
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+Y ++ GLC G +++ DL + ++ H + ++S LL G C G +E
Sbjct: 385 CGQFLKLSTYCVLLDGLC-KNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLE 443
Query: 455 NVMQIAHEMVTKKG 468
+ E ++K G
Sbjct: 444 EAWKQFDE-ISKNG 456
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 188/391 (48%), Gaps = 42/391 (10%)
Query: 95 YTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y I D L + + A + + L D + S L+ G +K A+ +F + +
Sbjct: 149 YGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 208
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP------------------- 191
A +Y+YNSL+ L R K F + +V P
Sbjct: 209 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVG 268
Query: 192 ---------------PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
PD+ TY T++ G C +G +E+A K+F+ + +K N+ +YN +I
Sbjct: 269 EAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 328
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
NG+CK +++EA + EM +G +P+ +TYN +I LC +GRV A+ L +M+ G
Sbjct: 329 NGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQF 388
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ST+ +L GLC G ++A+ +++ + P+++ + ++++G C+ GK +EA
Sbjct: 389 LKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQ 448
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
E+ GL+P ++N + L G L A+ LL QM + CLP+ +++N II L +
Sbjct: 449 FDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL-L 507
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
+ + + L++ M + D + S LL
Sbjct: 508 KENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 141/278 (50%), Gaps = 5/278 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
PD T TT+++G I +A ++FD MT K + Y +ING CK + A K
Sbjct: 75 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIK- 133
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++E M C+ + TY +I LC +G EA + ++M G +V + S++ GLC
Sbjct: 134 LHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G+ +A+ + + + ++ DV +Y +I+G + G E L M RG P F+
Sbjct: 194 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT 253
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
F + L + G++ A +L+ M P+ ++YNT++ GLC+ G+++D L + +
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLV-GQLEDATKLFESL 312
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G L+ Y+ L+ GYC++ ++ ++ EM K
Sbjct: 313 ADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPK 350
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 149/307 (48%), Gaps = 5/307 (1%)
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM--TVKPNLLAY 229
N I A + F ++ ++ + D TY +I G CK A K+ + M K ++ Y
Sbjct: 91 NGIPDAVQLFDEMTEKGLFG-DAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTY 149
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+I+ CK G EA +EM+ G P+ + Y++++ GLC GR+ EA +M
Sbjct: 150 GMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG 209
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G +V T+ S++ GL G + + +L +++ +PD ++ ++I+G CK GK E
Sbjct: 210 RGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGE 269
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A +L+ M +G +P + ++N + L G+L+ A L + + N SYN +I
Sbjct: 270 AQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 329
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
G C + ++ + L + M G Y+ L+ C+ G V ++ EM T G+
Sbjct: 330 GYCKDQ-KIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT-CGQ 387
Query: 470 LLKLKNF 476
LKL +
Sbjct: 388 FLKLSTY 394
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
GF+ + T +++KG+ + AV + E + D K+Y ++ING CK K+ A
Sbjct: 72 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
I L ++M+ K VF++ + L ++G A+ + +M LP+ V Y++++ G
Sbjct: 132 IKLHEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC GR+++ + M G + D Y+ L+ G G + V + MV +
Sbjct: 191 LCRF-GRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 245
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
++ PD + ++ G +A+ L EM +GL ++ + L + +
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
AI L ++M + +C + +Y II LC G + D+ MI +G D +YS
Sbjct: 129 GLAIKLHEKM-KGNCKGDVFTYGMIIDSLC-KDGMTTEALDMFSEMIGAGILPDVVVYSS 186
Query: 443 LLKGYCEEGNVENVMQIAHEM 463
L+ G C G ++ ++ EM
Sbjct: 187 LMDGLCRFGRLKEALEFFKEM 207
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 238/512 (46%), Gaps = 75/512 (14%)
Query: 10 NISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPY 69
+ S I + SI + +VI+ +NP P+ +P+ F L IVT +I NP
Sbjct: 23 HTSAIQETSI-SDEVFTVIKTMNPMEPA-----LEPMVPF---LSPKIVTSIIQNPPNPQ 73
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISI---AASLLKNSN-KLSD-- 123
FF WASN ++ C ITD+L++ + + + LKN K+ +
Sbjct: 74 LGFRFFIWASNFK----RFRAWESC-DLITDLLINQNGLELYCQTLEALKNGGIKVHNDA 128
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
FF+ LIK Y G A+ F + + +Y+YN +L VL++ N + LA + +
Sbjct: 129 FFV--LIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTR 186
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
++K N +P +V+T++ +I G CK G +++A +FD MT + P+ Y +I+G C+
Sbjct: 187 MMKLNCLP-NVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSK 245
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA-------------------- 280
+++A + ++M + G P+ +T NA++ G C+ RVDEA
Sbjct: 246 RVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYS 305
Query: 281 ---------------KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
++L KM + K +V + M+KGL GK A+ L + E+
Sbjct: 306 CLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTES 365
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ PD Y V+I GFC +G EA SL E+ P V +++ + + NG A
Sbjct: 366 GVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDA 425
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM-----------IRSG-- 432
+ +M ++ C P+ V++N++I GLC G+++ L +M + G
Sbjct: 426 QEIFNEMEKLGCYPSAVTFNSLIDGLC-KTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPS 484
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
H LD +++ C+ G + +I ++
Sbjct: 485 HVLDSASLQKMVEQLCDSGLIHKAYRILMQLA 516
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 160/324 (49%), Gaps = 23/324 (7%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV- 216
+Y Y ++ L ++ A E +++ + VVP D Y +I+G+C MG++ A+ +
Sbjct: 336 VYLYTIMMKGLAEAGKVRDALELLNEMTESGVVP-DTVCYNVLIKGFCDMGLLSEARSLQ 394
Query: 217 --FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
PN+ Y+ +I+G C+ G +A++ NEM GC P+ +T+N++I GLC
Sbjct: 395 LEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKT 454
Query: 275 GRVDEAKMLMAKM----------RLNGFKDNV---STHKSMLKGLCVVGKFDQAVGYLRN 321
G++++A +L KM RL+ +V ++ + M++ LC G +A L
Sbjct: 455 GQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQ 514
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ ++ P + +Y +++NGFCK+G + A L +EM+ +GL P ++ + L+
Sbjct: 515 LADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQR 574
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLC--MAKGRMQDVEDLVDRMIRSGHNLDFTM 439
+ A + QM + C P+ Y T++ +C M R + R IRS +
Sbjct: 575 EEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKA 634
Query: 440 YSCLLKGYCEEGNVENVMQIAHEM 463
++GY E+ VE ++ EM
Sbjct: 635 ----IEGYFEKQEVEKAVRGLLEM 654
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 41/154 (26%)
Query: 321 NVMEANMNPDVK----SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+EA N +K ++ V+I + K+G +D+A+ MR P V+++N + +L
Sbjct: 112 QTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVL 171
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
++ L A+ + +M +++CLPN +++ +I GL
Sbjct: 172 IQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGL------------------------- 206
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
C+ GNV++ + + EM T++G L
Sbjct: 207 -----------CKSGNVKDALHLFDEM-TQRGIL 228
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 174/319 (54%), Gaps = 15/319 (4%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG----------YCKM 207
L + N L+ ++ I A +I+K P+ T T+I+G +C +
Sbjct: 97 LVNCNILINSFCQLGHIPSAFSVLTKILKMGY-KPNTITLNTLIKGLCLNGKIHDKHCIV 155
Query: 208 GMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G +++A +F+ M + P++ + +++GFCK+G ++EAK + MM +G +P +TY
Sbjct: 156 GKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTY 215
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N+++ G + +V++AK + M G ++ ++ ++ G C + D+A+ L+ +
Sbjct: 216 NSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHH 275
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P+V +Y +I+G CK GK A+ L+ EM RG P + +++++ L +N ++D
Sbjct: 276 KQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDN 335
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
AI LL QM PN +Y +I GLC + G+++D + + ++ GHNL+ Y+ ++
Sbjct: 336 AIALLTQMKNQGIQPNMYTYTILIKGLCQS-GKLEDARKVFEDLLVKGHNLNVYTYTVMI 394
Query: 445 KGYCEEGNVENVMQIAHEM 463
+G+C++G + + + +M
Sbjct: 395 QGFCDKGLFDEALTLLSKM 413
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 180/352 (51%), Gaps = 15/352 (4%)
Query: 132 AYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP 191
+ + +V A+ F++ Q +N +LG LV+ + Q ++ +
Sbjct: 36 TFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVL-YLSQKMEFRGIK 94
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDV---MTVKPNLLAYNTMINGFCKKGE------- 241
P++ +I +C++G I +A V M KPN + NT+I G C G+
Sbjct: 95 PNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI 154
Query: 242 ---LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
L++A N+M+ P+ T+ ++ G C GRV EAK ++A M + G K V T
Sbjct: 155 VGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVT 214
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ S++ G +V + ++A + + ++PD++SY ++INGFCKI DEA+ LLKEM
Sbjct: 215 YNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMH 274
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+ + P V +++++ L ++G++ A+ L+ +M PN V+Y++I+ LC ++
Sbjct: 275 HKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALC-KNHQV 333
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ L+ +M G + Y+ L+KG C+ G +E+ ++ +++ K L
Sbjct: 334 DNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL 385
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 204/431 (47%), Gaps = 42/431 (9%)
Query: 21 VTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASN 80
V S+ RL QNP+P NI +F+ LGS + +K YH + + +
Sbjct: 43 VDDAVSLFNRLLQQNPTPPNI------EFNKILGSLVKSK-------HYHTVLYLSQKM- 88
Query: 81 PNPNPNKYHHTTP----CYTAITDVL-LSH--SLISIAASLLKNSNKLSDFFISKLIKAY 133
++ P C I L H S S+ +LK K + ++ LIK
Sbjct: 89 ------EFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGL 142
Query: 134 ------GDR----GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
D+ G +K A+ F++ +Y++ L+ + +K A+
Sbjct: 143 CLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAM 202
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
++ + + P V TY +++ GY + + AK +F+ M V P++ +Y+ +INGFCK
Sbjct: 203 MMIQGI-KPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIK 261
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++EA + + EM ++ PN +TY+++I GLC +G++ A L+ +M G N+ T+
Sbjct: 262 MMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYS 321
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S+L LC + D A+ L + + P++ +Y ++I G C+ GK ++A + +++ +
Sbjct: 322 SILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVK 381
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G V+++ + + + G D A+ LL +M C+PN +Y II L K +
Sbjct: 382 GHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSL-FKKDENEM 440
Query: 421 VEDLVDRMIRS 431
E L+ MI +
Sbjct: 441 AEKLLCEMIET 451
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 7/188 (3%)
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
H + I N + +Y+SL+ L + I A + ++ + PP++ TY++++ CK
Sbjct: 274 HHKQIIPN---VVTYSSLIDGLCKSGKISYALKLVDEM-HDRGQPPNIVTYSSILDALCK 329
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
++NA + M ++PN+ Y +I G C+ G+LE+A+K +++ +G N T
Sbjct: 330 NHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYT 389
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y MI G C G DEA L++KM NG N T++ ++ L + + A L ++
Sbjct: 390 YTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMI 449
Query: 324 EANMNPDV 331
E N + V
Sbjct: 450 ETNFDGRV 457
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI G + A+ + + +Y+S+L L + + + A Q+ K
Sbjct: 286 SSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQM-K 344
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELE 243
+ P++ TYT +I+G C+ G +E+A+KVF+ + VK N+ Y MI GFC KG +
Sbjct: 345 NQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFD 404
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA +++M + GC PN TY +I L + A+ L+ +M F V+ ++
Sbjct: 405 EALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLI 464
Query: 304 KGLCVVG 310
+ V G
Sbjct: 465 ASIWVTG 471
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 164/312 (52%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++N+LL + + A E ++ +EN++P DV TYT ++ G C++G ++ A +
Sbjct: 271 LVTFNTLLDGFCKAGMLPRALEVLEEMCRENILP-DVITYTILVNGLCRVGQVQVAFYLL 329
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ + + P+++AY ++++G CK GE+EEA K + EM RGCR + Y++++ G C
Sbjct: 330 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRA 389
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G V +A+ ++A+M + T+ +L GL G +AV + +++ PDV +Y
Sbjct: 390 GNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTY 449
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G CK + EA L EM +RG P + +V L G +D A L+ +M +
Sbjct: 450 NTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSR 509
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN V Y ++I GLC + RM D ++D M G LD Y L+ G V
Sbjct: 510 KRHAPNVVVYTSLIDGLCKSD-RMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVA 568
Query: 455 NVMQIAHEMVTK 466
M + EMV +
Sbjct: 569 EAMAMYDEMVAR 580
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 202/433 (46%), Gaps = 16/433 (3%)
Query: 44 QPLDQFSLCLGS---NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITD 100
+ LD+FS+ N++ +++ NP A+ F N ++ Y +
Sbjct: 86 RALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFE-----NMESSRVKPEIVTYNTVIS 140
Query: 101 VLLSHSLISIAASLL-----KNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
L + A LL K D + LI A+ ++ A + + K
Sbjct: 141 GLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGI 200
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
+ + N L+ + + ++ A E + VP DV TY ++I C G + A
Sbjct: 201 NPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVP-DVITYNSIIHALCVAGKVVEAA 259
Query: 215 KVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
++ M+ P+L+ +NT+++GFCK G L A + + EM P+ +TY ++ GLC
Sbjct: 260 EILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRV 319
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+V A L+ ++ G+ +V + S++ GLC G+ ++A ++ + V Y
Sbjct: 320 GQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMY 379
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++G+C+ G +A +L EM + + P +F++N V L+++G + +A+ L+ +
Sbjct: 380 SSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA 439
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+P+ V+YNT+I GLC A R+++ DL D M G + ++ G C G V+
Sbjct: 440 RGYVPDVVTYNTLIDGLCKAN-RVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVD 498
Query: 455 NVMQIAHEMVTKK 467
+ + EM K+
Sbjct: 499 DAWSLVVEMSRKR 511
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 173/336 (51%), Gaps = 20/336 (5%)
Query: 158 LYSYNSLLGVLVR----VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
++SYN LL +LV+ + K+ ++ H N+V T+ +IRG CK G A
Sbjct: 27 VHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLV-----TFKILIRGNCKAGQAMRA 81
Query: 214 K---KVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+ D +V P++ +N +I+G K G ++A K M + +P +TYN +I G
Sbjct: 82 LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141
Query: 271 LCINGRVDEAKMLMAKMRLNGFKD--NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
LC +G +++A+ L+ +M G K ++ T+ +++ + +A + + A +N
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PDV + ++++G CK G +EA+ +L M+ G P V ++N++ L G++ A +
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
LK M C P+ V++NT++ G C A G + ++++ M R D Y+ L+ G C
Sbjct: 262 LKTMS---CSPDLVTFNTLLDGFCKA-GMLPRALEVLEEMCRENILPDVITYTILVNGLC 317
Query: 449 EEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
G V+ + E+V ++G + + + T +VD L
Sbjct: 318 RVGQVQVAFYLLEEIV-RQGYIPDVIAY-TSLVDGL 351
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 172/394 (43%), Gaps = 45/394 (11%)
Query: 53 LGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAA 112
L NI+ I + + AL + P P+ Y +I L + AA
Sbjct: 205 LTCNILVSGICKDGDVEEALEILDGMKLAGPVPD-----VITYNSIIHALCVAGKVVEAA 259
Query: 113 SLLKNSNKLSDFF-ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+LK + D + L+ + G + A+ + + + +Y L+ L RV
Sbjct: 260 EILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRV 319
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLA 228
+++A +IV++ +P DV YT+++ G CK G IE A K+ M+V+ ++
Sbjct: 320 GQVQVAFYLLEEIVRQGYIP-DVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVM 378
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMN---------------------------------- 254
Y+++++G+C+ G + +A++ + EM++
Sbjct: 379 YSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 438
Query: 255 -RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG P+ +TYN +I GLC RV EA L +M G N T S++ GLC VG+ D
Sbjct: 439 ARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVD 498
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A + + P+V Y +I+G CK + D+A +L MR +G+ F++ +
Sbjct: 499 DAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLI 558
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
+ G + A+ + +M LP+ + T+
Sbjct: 559 VSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 127/278 (45%), Gaps = 41/278 (14%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
K ++ +YN +++ K G K ++++ GC PN +T+ +I G C G+ A
Sbjct: 24 KHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALE 83
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
+ + +V ++ GL G DQAV N+ + + P++ +Y VI+G C
Sbjct: 84 FLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLC 143
Query: 343 KIGKSDEAISLLKE-------------------------------------MRARGLKPT 365
K G ++A LL+E M+A G+ P
Sbjct: 144 KSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPD 203
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V + N + + ++G+++ A+ +L M +P+ ++YN+II LC+A G++ + +++
Sbjct: 204 VLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVA-GKVVEAAEIL 262
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M S D ++ LL G+C+ G + +++ EM
Sbjct: 263 KTMSCSP---DLVTFNTLLDGFCKAGMLPRALEVLEEM 297
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+G+K +V ++ +L L G + ++++ + +P++ +++++I G CK G++
Sbjct: 21 DGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMR 80
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A+ L+ + + P V+ FN + L ++G D+A+ L + M P V+YNT+I
Sbjct: 81 ALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVIS 140
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNL--DFTMYSCLLKGY 447
GLC + G ++ +L++ MIR G D Y+ L+ +
Sbjct: 141 GLCKS-GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAF 179
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 169/312 (54%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN+L+ + + ++ A F ++ K V P ++TY +++ GYCK G ++ A K++
Sbjct: 401 VFTYNNLIHWHCQAHKLREALNLFDRMKKAGV-KPSINTYNSLLMGYCKKGCMDEAVKLY 459
Query: 218 DVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + KPN++ Y T++ G+ K + + A ++EM G N+ TYN +I G+C+
Sbjct: 460 SEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMV 519
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
RV E ++ GF + T+ S++ G G A + + E + P++ +Y
Sbjct: 520 DRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITY 579
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
I+G+C+ G SD A+ +L ++R RGL+P + ++NA+ + G + A+ LL + +
Sbjct: 580 TSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLK 639
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN V YN++I G M++V + MI+ G D + Y+ L+ G+ ++GNV
Sbjct: 640 DGLAPNTVVYNSLITGY-KNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVA 698
Query: 455 NVMQIAHEMVTK 466
+++ EM+ K
Sbjct: 699 FALELYSEMMAK 710
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 166/333 (49%), Gaps = 6/333 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L++ Y + + A + KQ Y+YN L+ + V+ + + + E
Sbjct: 477 LMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEG 536
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+P + TY ++I G+ K GM+ +A V+ M K PN++ Y + I+G+C+ G + A
Sbjct: 537 FIPT-MMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMA 595
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K +N++ RG +P+ + YNA+I G C G + A L+ + +G N + S++ G
Sbjct: 596 LKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITG 655
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+ + + ++++ + D +Y +I+GF K G A+ L EM A+G P
Sbjct: 656 YKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPD 715
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
F+F A+ L +G++D A LL++M ++D PN YN +I G + ++Q+ L
Sbjct: 716 AFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGY-LRDCKLQEAFRLH 774
Query: 426 DRMIRSGHNLDFTMYSCLL-KGYCEEGNVENVM 457
D M+ G D T Y L+ K + E N +V+
Sbjct: 775 DEMLNMGIQPDDTTYDILVSKKFLEADNCADVL 807
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 158/333 (47%), Gaps = 6/333 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G+ A+ + K++ C ++Y +++ VLV+ ++ A ++ ++ DV
Sbjct: 241 GDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEM-RDAGKKMDVIV 299
Query: 197 YTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
TT++RGYC + NA +F + P + Y +I G + G ++A + +M
Sbjct: 300 ATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMT 359
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+G P+ + ++ GL + R +A L +M +G D V T+ +++ C K
Sbjct: 360 GQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPD-VFTYNNLIHWHCQAHKLR 418
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ + +A + P + +Y ++ G+CK G DEA+ L EM G KP V ++ +
Sbjct: 419 EALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLM 478
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
R + + D A LL +M Q N +YN +I G+CM R+ +V+ ++ + G
Sbjct: 479 RGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVD-RVCEVDGMLKSFMSEGF 537
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ ++ G+ + G + + + +M K
Sbjct: 538 IPTMMTYNSIINGFVKAGMMGSAFTVYQQMREK 570
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 137/274 (50%), Gaps = 5/274 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCM 249
D + ++ K GM E+A ++FD M + P+ Y I CK G+ A + +
Sbjct: 191 DAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRML 250
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
EM G + TY M+ L GR++EA + +MR G K +V ++++G C+
Sbjct: 251 REMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLR 310
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ A+ + ++ + P Y V+I G ++G + +A L ++M +GL P+ F
Sbjct: 311 QEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFEL 370
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ V + L+ + A+ L ++M LP+ +YN +I C A ++++ +L DRM
Sbjct: 371 SLVLKGLLNDRRWKDAVCLFEEMAD-SGLPDVFTYNNLIHWHCQAH-KLREALNLFDRMK 428
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++G Y+ LL GYC++G ++ +++ EM
Sbjct: 429 KAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEM 462
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 144/327 (44%), Gaps = 53/327 (16%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMI 233
A F + +K+ +VP V Y +IRG ++GM + A ++ MT + P+ + ++
Sbjct: 316 ALNLFKETLKDGIVPTKV-MYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVL 374
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
G ++A EM + G P+ TYN +I+ C ++ EA L +M+ G K
Sbjct: 375 KGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVK 433
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV---------------------- 331
+++T+ S+L G C G D+AV + P+V
Sbjct: 434 PSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYAL 493
Query: 332 -------------KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+Y V+ING C + + E +LK + G PT+ ++N++ V+
Sbjct: 494 LDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVK 553
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC------MAKGRMQDVEDLVDRMIRSG 432
G + A + +QM + PN ++Y + I G C MA + DV R G
Sbjct: 554 AGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVR-------RRG 606
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQI 459
D Y+ L+ G+C+EGN+ + +Q+
Sbjct: 607 LQPDIVAYNALINGFCQEGNMSHALQL 633
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 143/337 (42%), Gaps = 17/337 (5%)
Query: 136 RGN-VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
RG+ K A+ F + + + +++L+ ++ + A F ++ + PD
Sbjct: 169 RGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEI-DPDQ 227
Query: 195 STYTTMIRGYCKMG-------MIENAKKV-FDVMTVKPNLLAYNTMINGFCKKGELEEAK 246
Y I CK+G M+ K+V FD Y TM++ K G +EEA
Sbjct: 228 RVYALAITALCKLGDGGRALRMLREMKEVGFDTCD-----FTYRTMVDVLVKTGRMEEAL 282
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ +EM + G + + + ++ G C+ V A L + +G + +++G
Sbjct: 283 RVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGC 342
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
VG +A R + + P +V+ G + +A+ L +EM GL P V
Sbjct: 343 DQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDV 401
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
F++N + + +L A+ L +M + P+ +YN+++ G C KG M + L
Sbjct: 402 FTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYC-KKGCMDEAVKLYS 460
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M G + Y L++GY + + +N + EM
Sbjct: 461 EMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEM 497
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 98/220 (44%), Gaps = 2/220 (0%)
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M+ RG P+ + ++ +A L +MR G++ + +++ G
Sbjct: 147 HMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEG 206
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ AV + A ++PD + Y + I CK+G A+ +L+EM+ G F++
Sbjct: 207 MHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYR 266
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ +LV+ G ++ A+ + +M + + T++ G C+ + + + +L ++
Sbjct: 267 TMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCL-RQEVGNALNLFKETLK 325
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
G MY L++G + G + ++ +M T +G L
Sbjct: 326 DGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQM-TGQGLL 364
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 148/273 (54%), Gaps = 4/273 (1%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMN 250
+S ++ ++ CK + A K+ D M KP+++ YN +ING CK+G L+EA K +N
Sbjct: 82 LSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 141
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M + GC+PN +T+N ++ +C GR +A+ L++ M G +V T ++ LC G
Sbjct: 142 NMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 201
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+A+ L + P+ SY +++GFCK K D AI L M +RG P + ++N
Sbjct: 202 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 261
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ L ++G++D A+ +L Q+ C P ++YNT+I GL G+ + L+D M R
Sbjct: 262 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV-GKTERAIKLLDEMRR 320
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G D YS L+ G EG V+ ++ H++
Sbjct: 321 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 353
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 161/311 (51%), Gaps = 7/311 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ + + + A +F + + P+V T+ ++R C G +A+K+
Sbjct: 119 TYNVLINGICKEGRLDEAIKFLNNMPSYGC-QPNVITHNIILRSMCSTGRWMDAEKLLSD 177
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ +N +IN C++G L A + +M GC PN L+YN +++G C +
Sbjct: 178 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 237
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A + M G ++ T+ ++L LC GK D AV L + +P + +Y
Sbjct: 238 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 297
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G K+GK++ AI LL EMR +GLKP + +++++ L G++D AI + +
Sbjct: 298 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 357
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVE-DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
PN ++YN+I+ GLC K R D D + MI Y+ L++G EG +
Sbjct: 358 IRPNAITYNSIMLGLC--KSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKE 415
Query: 456 VMQIAHEMVTK 466
+ + +E+ ++
Sbjct: 416 ALDLLNELCSR 426
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 150/286 (52%), Gaps = 18/286 (6%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PDV TY +I G CK G ++ A K + M +PN++ +N ++ C G +A+K
Sbjct: 115 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKL 174
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+++M+ +GC P+ +T+N +I LC G + A ++ KM ++G N ++ +L G C
Sbjct: 175 LSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCK 234
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
K D+A+ YL ++ PD+ +Y ++ CK GK D A+ +L ++ ++G P + +
Sbjct: 235 EKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLIT 294
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N V L + G+ +RAI LL +M + P+ ++Y++++ GL E VD
Sbjct: 295 YNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL--------SREGKVDEA 346
Query: 429 IRSGHNLD-------FTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
I+ H+L+ Y+ ++ G C+ + + M++K+
Sbjct: 347 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR 392
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 81/210 (38%), Gaps = 37/210 (17%)
Query: 95 YTAITDVLLSHSLISIAASLLK--NSNKLSDFFIS--KLIKAYGDRGNVKAAIFWFHQAK 150
Y + L + +A +L +S S I+ +I G + AI + +
Sbjct: 260 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 319
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +Y+SL+ L R + A +FFH +
Sbjct: 320 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL-------------------------- 353
Query: 211 ENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+ + ++PN + YN+++ G CK + + A + M+++ C+P E TY +I G
Sbjct: 354 -------EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 406
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ G EA L+ ++ G S +
Sbjct: 407 IAYEGLAKEALDLLNELCSRGLVKKSSAEQ 436
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 203/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ G+ K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEENL-ECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L E + N M G +P+ TY+ +I GLC ++D+A +L +M G N
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 207/443 (46%), Gaps = 76/443 (17%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ +I + G+V A F K +++G + + NS++ L +V ++ AE Q+
Sbjct: 256 TTVIHGFFKEGDVGKAYTLF--CKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM 313
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
+ E+++P + +TY ++I GY G A ++ M+ +PN++ Y+ +I+ CK G
Sbjct: 314 IDEHIMP-NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGL 372
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAM---------------------------------- 267
EA++ N M+ G +PN TY ++
Sbjct: 373 HAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNI 432
Query: 268 -IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
IY C GR+DEA + KM+ GF ++ + +++ GLC +G+ D A+ +++
Sbjct: 433 EIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDG 492
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PD+ ++ +I+GF GK ++A L EM RG+ P V +FN++ L + G++ A
Sbjct: 493 LSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEAR 552
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L MP+ PN VSYNT+I G +A G + +V L+D M+ G ++ LL G
Sbjct: 553 KLFDLMPRAGAKPNVVSYNTMIHGYFIA-GEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG 611
Query: 447 Y-------------------CEEGNVENVMQIAHEMVTK-------------KGRLLKLK 474
CE+G +E+++ + EM+ K +G +K
Sbjct: 612 MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGVTVKAS 671
Query: 475 NFLTRVVDALLLMWIVTGGSWIS 497
+ VV +L + +VT IS
Sbjct: 672 YHCSSVVISLKALEVVTQAGAIS 694
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 162/313 (51%), Gaps = 5/313 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKE-NVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
++SY +LL L + A E H + ++ + PP+V +YTT+I G+ K G + A +
Sbjct: 215 VFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTL 274
Query: 217 FDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
F M + PN++ N++I+G CK +++A+ + +M++ PN TYN++I+G
Sbjct: 275 FCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLS 334
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+G+ EA ++ +M +G + NV T+ ++ LC G +A +++++ P+ +
Sbjct: 335 SGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNAST 394
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +++G+ G + ++ M G++P FN + G LD A L +M
Sbjct: 395 YGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQ 454
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
Q +P+ V+Y T+I GLC GR+ D +MI G + D ++ L+ G+ G
Sbjct: 455 QQGFMPDIVAYTTVIDGLCKI-GRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKW 513
Query: 454 ENVMQIAHEMVTK 466
E ++ +EM+ +
Sbjct: 514 EKAEELFYEMMDR 526
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 156/342 (45%), Gaps = 38/342 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SY +++ + + A F +++ ++ +PP+V T ++I G CK+ ++ A+ V
Sbjct: 254 SYTTVIHGFFKEGDVGKAYTLFCKML-DHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQ 312
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + PN YN++I+G+ G+ EA + + EM G RPN +TY+ +I LC +G
Sbjct: 313 MIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGL 372
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
EA+ + M +G K N ST+ S+L G G +++ M P + +
Sbjct: 373 HAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNI 432
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
I +CK G+ DEA +M+ +G P + ++ V L + G LD A+ QM
Sbjct: 433 EIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDG 492
Query: 397 CLPNFVSYNTIICGLCM----------------------------------AKGRMQDVE 422
P+ +++NT+I G + +G++ +
Sbjct: 493 LSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEAR 552
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L D M R+G + Y+ ++ GY G V VM++ +M+
Sbjct: 553 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDML 594
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 7/220 (3%)
Query: 250 NEMMNRGCR---PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
N M G + P+ T+ +I C G ++ + ++ G + T +L+ L
Sbjct: 130 NRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTL 189
Query: 307 CVVGKFDQAVG-YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG--LK 363
C + A+ LR + E PDV SY ++ G C K +EA L+ M G
Sbjct: 190 CAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCP 249
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V S+ V + G++ +A L +M PN V+ N++I GLC + M E
Sbjct: 250 PNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQA-MDKAEA 308
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ +MI + T Y+ L+ GY G ++I EM
Sbjct: 309 VLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEM 348
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 37/137 (27%)
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL-VENGELDRAIL 387
PD+ ++ ++I+ C G + + L ++ GL+ +F + R L E D +
Sbjct: 142 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNI 201
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+L++MP++ C P+ S Y+ LLKG
Sbjct: 202 VLRRMPELGCTPDVFS------------------------------------YTTLLKGL 225
Query: 448 CEEGNVENVMQIAHEMV 464
C E E ++ H M
Sbjct: 226 CAEKKCEEAAELIHMMA 242
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 178/374 (47%), Gaps = 41/374 (10%)
Query: 129 LIKAYGDRGNVKAA--IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y G+V+AA + F K + + +Y L+ + + AE+ + +
Sbjct: 233 LINGYVSLGDVEAAKGVLKFMSEKGVSRN--VVTYTLLIKGYCKQCKMDEAEKVLRGMQE 290
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
E + PD Y +I GYC+ G I++A ++ D M +K NL N++ING+CK+GE+
Sbjct: 291 EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIH 350
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ + M++ +P+ +YN ++ G C G EA L KM G + V T+ ++L
Sbjct: 351 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 410
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
KGLC VG FD A+ +M+ + PD Y +++G K+ + A +L K++ ARG
Sbjct: 411 KGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 470
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA--------- 414
+ +FN + L + G++ A + +M + C P+ ++Y T+I G C A
Sbjct: 471 KSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV 530
Query: 415 KGRMQ-------------------------DVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
KG M+ +V DL+ M G + Y L+ G+C+
Sbjct: 531 KGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCK 590
Query: 450 EGNVENVMQIAHEM 463
EG ++ EM
Sbjct: 591 EGMLDKAFSSYFEM 604
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 183/408 (44%), Gaps = 74/408 (18%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++K Y ++G K A++ F + L S NSLL LV+ A + Q+++
Sbjct: 128 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVG 187
Query: 189 VVP----------------------------------PDVSTYTTMIRGYCKMGMIENAK 214
+VP P++ TY ++I GY +G +E AK
Sbjct: 188 IVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAK 247
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR-PNELTYNAMIYG 270
V M+ V N++ Y +I G+CK+ +++EA+K + M P+E Y +I G
Sbjct: 248 GVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDG 307
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C G++D+A L+ +M G K N+ S++ G C G+ +A G + +++ N+ PD
Sbjct: 308 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 367
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
SY +++G+C+ G + EA +L +M G++PTV ++N + + L G D A+ +
Sbjct: 368 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 427
Query: 391 QMPQMDCLPNFVSY-----------------------------------NTIICGLCMAK 415
M + P+ V Y NT+I GLC
Sbjct: 428 LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC-KM 486
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G+M + E++ D+M G + D Y L+ GYC+ NV ++ M
Sbjct: 487 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 162/342 (47%), Gaps = 37/342 (10%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+++ L ++ + AEE F ++ K+ PD TY T+I GYCK + A KV
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKM-KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA 533
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P++ YN++I+G K L E + EM RG PN +TY A+I G C G
Sbjct: 534 MEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 593
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD----VK 332
+D+A +M NG N+ +M+ GL +G+ D+A ++ +++ PD +K
Sbjct: 594 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 653
Query: 333 S----------------------------YEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
S Y + I G CK GK D+A + +G P
Sbjct: 654 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP 713
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
F++ + G +D A L +M + +PN V+YN +I GLC ++ + + L
Sbjct: 714 DNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSE-NVDRAQRL 772
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ + G + Y+ L+ GYC+ GN++ ++ +M+ +
Sbjct: 773 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 814
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 166/373 (44%), Gaps = 37/373 (9%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G+ A + Q + +YN+LL L RV + A + +H ++K
Sbjct: 374 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 433
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF-DVMT--VKPNLLAYNTMINGFCKKGELEEA 245
V P +V Y+T++ G KM E A ++ D++ + + +NTMI+G CK G++ EA
Sbjct: 434 VAPDEVG-YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 492
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ ++M + GC P+ +TY +I G C V +A + M ++ + S++ G
Sbjct: 493 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 552
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L + + L + + P++ +Y +I+G+CK G D+A S EM GL
Sbjct: 553 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 612
Query: 366 VFSFNAVFRILVENGELDRAILLLKQM------PQMDC---------------------- 397
+ + + L G +D A LL+++M P +C
Sbjct: 613 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESC 672
Query: 398 ----LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
LPN + YN I GLC G++ D + G D Y L+ GY GNV
Sbjct: 673 KTFLLPNNIVYNIAIAGLC-KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNV 731
Query: 454 ENVMQIAHEMVTK 466
+ ++ EM+ +
Sbjct: 732 DEAFRLRDEMLRR 744
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 156/339 (46%), Gaps = 5/339 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A+ + ++ L+ NSL+ + I AE ++V N
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+ PD +Y T++ GYC+ G A + D M ++P +L YNT++ G C+ G ++A
Sbjct: 364 L-KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 422
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + MM RG P+E+ Y+ ++ GL + A L + GF + T +M+ G
Sbjct: 423 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 482
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +GK +A + + +PD +Y +I+G+CK +A + M + P+
Sbjct: 483 LCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPS 542
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +N++ L ++ L LL +M PN V+Y +I G C +G +
Sbjct: 543 IEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC-KEGMLDKAFSSY 601
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M +G + + + S ++ G G ++ + +MV
Sbjct: 602 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 640
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 144/287 (50%), Gaps = 7/287 (2%)
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKG 240
+ +E P V + +++ Y + G+ +NA VFD M P+L + N+++N K G
Sbjct: 114 VYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNG 171
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
E A +M+ G P+ + M+ C +G+VDEA + KM G + N+ T+
Sbjct: 172 ETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYH 231
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S++ G +G + A G L+ + E ++ +V +Y ++I G+CK K DEA +L+ M+
Sbjct: 232 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 291
Query: 361 -GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
L P ++ + G++D A+ LL +M ++ N N++I G C +G +
Sbjct: 292 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC-KRGEIH 350
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E ++ RM+ D Y+ LL GYC EG+ + +M+ +
Sbjct: 351 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 397
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PN 225
+R +I+ + + K ++P ++ Y I G CK G +++A++ F ++++K P+
Sbjct: 656 IRYAAIQKIADSLDESCKTFLLPNNI-VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 714
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
Y T+I+G+ G ++EA + +EM+ RG PN +TYNA+I GLC + VD A+ L
Sbjct: 715 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 774
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
K+ G NV T+ +++ G C +G D A ++E ++P ++
Sbjct: 775 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQ 821
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 111/238 (46%), Gaps = 1/238 (0%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G + A + + + A + ++++ L R+ I A ++V
Sbjct: 584 LIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG 643
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
P + IR Y + I ++ + PN + YN I G CK G++++A++
Sbjct: 644 FFPDHECFLKSDIR-YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 702
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ + +G P+ TY +I+G G VDEA L +M G N+ T+ +++ GLC
Sbjct: 703 FSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 762
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
D+A + + + P+V +Y +I+G+CKIG D A L +M G+ P++
Sbjct: 763 SENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 200/413 (48%), Gaps = 18/413 (4%)
Query: 101 VLLSHSLISIAASLLKN----SNKLSDFFISKLIKAYGDRGNVKAAIF-WFHQAKQIENG 155
VL S ++ +LLK L + KLI AYG RGN F F+QA+
Sbjct: 4 VLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYG-RGNKSGDAFDLFNQAESFACS 62
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
++++ L+ +LV + AE + ++V++ D Y +IR + + G +++A +
Sbjct: 63 PTVHAFTKLIDILVNSGEFERAELVYKKLVQKG-CQLDRFAYNVLIRYFGRSGQLDSAME 121
Query: 216 VFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+F M +K P+ Y ++N K G ++EA+ + M+ RG PN TYN ++
Sbjct: 122 MFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFR 181
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G++D A L A+M+ GF+ +V T+ +L LC G+ A + +PD
Sbjct: 182 KVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSY 241
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y ++NG K G+ +EA + +EM RG+ + ++N++ L + G +DR L+K+M
Sbjct: 242 TYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM 301
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ P+ S+NTI+ L A + ++ RM+ SG D Y+ L+ Y G+
Sbjct: 302 SRKGFHPDAFSFNTIMDALGKAN-KPDAAREVFARMVESGCKPDLISYNILIDSYARFGD 360
Query: 453 VENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQV 505
Q+ EMV + G + + K + + L+ W+ T G F + ++
Sbjct: 361 AAQARQMLEEMV-EAGFIPETKTYNS------LIHWLATDGQVDEAFAVLEEM 406
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 163/337 (48%), Gaps = 5/337 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A+ G + A+ F + K+ + +YN LL L + A + FH++ +
Sbjct: 176 LMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDG 235
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
PD TY+T++ G K G +E A KVF M V +L+ YN+++ K G ++
Sbjct: 236 C-SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRV 294
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K M EM +G P+ ++N ++ L + D A+ + A+M +G K ++ ++ ++
Sbjct: 295 WKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDS 354
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
G QA L ++EA P+ K+Y +I+ G+ DEA ++L+EM G +P
Sbjct: 355 YARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPD 414
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V ++N + +L + GE RA L +QM P+ +SY I GL R+ + L
Sbjct: 415 VVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAF-DDRLDEALVLF 473
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
M G +D MY L++ G+ E Q+ HE
Sbjct: 474 KDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 200/455 (43%), Gaps = 50/455 (10%)
Query: 53 LGSNIVTKVI--YEQTNPYHALF-FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLIS 109
L N + K+I Y + N F FN A + +P T +T + D+L++
Sbjct: 28 LRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSP-----TVHAFTKLIDILVNSGEFE 82
Query: 110 IAA----SLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
A L++ +L F + LI+ +G G + +A+ F + K + Y+Y L+
Sbjct: 83 RAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLV 142
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVP---------------------------------- 191
L + ++ A FF +++ + P
Sbjct: 143 NALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQ 202
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
P V TY ++ C G + A+K+F MT P+ Y+T++NG K G +EEA K
Sbjct: 203 PSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKV 262
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
EM++RG + + YN+++ L G +D LM +M GF + + +++ L
Sbjct: 263 FREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGK 322
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
K D A ++E+ PD+ SY ++I+ + + G + +A +L+EM G P +
Sbjct: 323 ANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKT 382
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N++ L +G++D A +L++M C P+ V+YN ++ + +G Q L +M
Sbjct: 383 YNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLM-DMLGKRGENQRAARLFQQM 441
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G D Y+ + G + ++ + + +M
Sbjct: 442 KDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDM 476
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 181/360 (50%), Gaps = 8/360 (2%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLL 165
+ + +L ++ + L+K Y +G++ +A+ F K ENG C +Y ++
Sbjct: 314 VKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFD--KMNENGICPNNVTYAVII 371
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD--VMTVK 223
+ ++ A E ++Q+ K + P V ++IRGY K E A K+FD V
Sbjct: 372 EWCCKNGNMDKAYEIYNQM-KNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI 430
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
N+ YN++++ CK+G++ EA +M+ +G RP+ ++YN MI G C G +D A +
Sbjct: 431 ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGV 490
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+M G K N+ T+ ++ G G + A G + N+ P + ++ING CK
Sbjct: 491 FVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCK 550
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G++ E+ LK++ G PT ++N + V+ G ++ A+ + +M ++ PN +
Sbjct: 551 AGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFT 610
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y +I G C + M ++D M G LD T+Y L+ G+C +G++ N Q+ E+
Sbjct: 611 YTNLINGFCKSN-NMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSEL 669
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 182/350 (52%), Gaps = 14/350 (4%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENG-ACLYSYNSLLGVLVRVNSIKLAEEFFH 182
F ++ LI+ Y + + A F +A + G A +++YNSLL L + + A +
Sbjct: 400 FNVNSLIRGYLKARSPEEASKLFDEA--VACGIANVFTYNSLLSWLCKEGKMSEACSIWE 457
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKK 239
++V++ V P VS Y MI G+C+ G +++A VF M +KPNL+ Y+ +++G+ KK
Sbjct: 458 KMVRKGVRPSVVS-YNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKK 516
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G+ E A + M P++ T N +I GLC GR E++ + K+ GF T+
Sbjct: 517 GDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTY 576
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ G G + A+ + + ++P+V +Y +INGFCK D A+ ++ EM+
Sbjct: 577 NCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKN 636
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G++ V + A+ G++ A LL ++ ++ PN V Y+++I G ++Q
Sbjct: 637 KGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGF----RKLQ 692
Query: 420 DVE---DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++E L RMI G D +Y+ L+ G +EG + ++ EM+ K
Sbjct: 693 NMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAK 742
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 161/330 (48%), Gaps = 5/330 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ Y +G+ + A + + + ++ N ++ L + +++ ++V+
Sbjct: 507 SVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQ 566
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
E +P TY +I G+ K G + +A V+ M V PN+ Y +INGFCK ++
Sbjct: 567 EGFIPT-CMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMD 625
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A K M+EM N+G + Y A+I G C G + A L+++++ G N + SM+
Sbjct: 626 LALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMI 685
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G + + A+ + ++ + D++ Y +I+G K GK A L EM A+G+
Sbjct: 686 SGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIM 745
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + +++ + L G+L+ A +L+ M + P YNT+I G +G +Q+
Sbjct: 746 PDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGH-FKEGNLQEAFR 804
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
L + M+ G D T Y L+ G ++GN+
Sbjct: 805 LHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 226/490 (46%), Gaps = 42/490 (8%)
Query: 6 RSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKN---ISSQPLDQFSLCLGSNIVTKVI 62
++L++ ++P+ I T ++ QNP P S P Q S + + ++
Sbjct: 21 KTLSSQPELPNIPISETPLS--------QNPHPNTNFPGKSAPTSQDSFLTQTQYIDTLL 72
Query: 63 YEQTNPYHALFFFNWASNPNPNPNKYH-----------HTTPCYTA--ITDVLLSHS--- 106
Q +P AL +F WAS T C A + + S
Sbjct: 73 NHQNDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDWGP 132
Query: 107 LISIAASLLKNSNKLSDF-----FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSY 161
+ S+ + L S++ DF + L+ +Y + A+ F+ + + CL
Sbjct: 133 VPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVM 192
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N L LV+ N I+ A + ++++ + V D +T + MIR + G +E A+ F
Sbjct: 193 NIFLSELVKNNMIREARDVYNKMASKGV-KGDCATISVMIRASMREGKLEEAEGWFREAK 251
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI-NGRV 277
V+ + AY+ +I CKK + A + EM ++G P+E+ + +I G+C+ G++
Sbjct: 252 NKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVI-GVCMKQGKM 310
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA + +M G NV +++KG C G D A+ + E + P+ +Y V+
Sbjct: 311 LEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVI 370
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I CK G D+A + +M+ + + PTVF+ N++ R ++ + A L + + C
Sbjct: 371 IEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDE--AVAC 428
Query: 398 -LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+ N +YN+++ LC +G+M + + ++M+R G Y+ ++ G+C++G++++
Sbjct: 429 GIANVFTYNSLLSWLC-KEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSA 487
Query: 457 MQIAHEMVTK 466
+ EM+ K
Sbjct: 488 NGVFVEMLEK 497
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 175/346 (50%), Gaps = 39/346 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+LLG L + + A F + + P DV TYTT+I +CKM E A + +
Sbjct: 78 TYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDV-TYTTLIDVFCKMCQFETAYGLLQL 136
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P + +Y ++ING CK ++++A + EM GC+P+ +TYN +I+GLC+ R
Sbjct: 137 MASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQR 196
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EAK L+ M N F+ + T ++++GLC + +A + + + PD+ ++ V
Sbjct: 197 LHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTV 256
Query: 337 VINGFC------------------------------KIGKS---DEAISLLKEMRARGLK 363
+++ C ++G+ D A LL++M RG+
Sbjct: 257 LVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVA 316
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++ A F+ L + E RA ++M + P+ V+YN ++ G C A R+ E
Sbjct: 317 PNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKAN-RLDMAEK 375
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+V M +SG + Y+ L+ +C +G VE + ++ H MV+ +GR
Sbjct: 376 MVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVS-RGR 420
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 166/372 (44%), Gaps = 46/372 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+KA G + A + + + +++YN ++ L + I A EFF E
Sbjct: 16 LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFF-----ET 70
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ PDV TY T++ G CK G + A +F M + P+ + Y T+I+ FCK + E A
Sbjct: 71 MPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETA 130
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M +R C P +Y ++I GLC N +VD+A L +M+L G K + T+ +++ G
Sbjct: 131 YGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHG 190
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP- 364
LCV + +A L ++E + PD ++ +I G C + EA L + M +G P
Sbjct: 191 LCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPD 250
Query: 365 --------------------------------TVFSFNAVFRILVENGELDRAILLLKQM 392
V + +FR L DRA LL++M
Sbjct: 251 LVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKM 310
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ PN V+Y GL K M+ + RM+ G D Y+ L+ G+C+
Sbjct: 311 ARRGVAPNVVTYTAFFKGLGDWKEGMRAYREF-RRMLEQGIEPDMVAYNVLVDGFCK--- 366
Query: 453 VENVMQIAHEMV 464
N + +A +MV
Sbjct: 367 -ANRLDMAEKMV 377
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 128/244 (52%), Gaps = 5/244 (2%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
KPN L+Y ++ C+ G++++A + EM P+ TYN +I LC R+ A
Sbjct: 7 KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
M + +V T+ ++L GLC G+ QA ++ A + P +Y +I+ FC
Sbjct: 67 FFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K+ + + A LL+ M +R PTV+S+ ++ L +N ++D+A L ++M C P+ V
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 182
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YNT+I GLC+ K R+ + +DL+ M+ + D ++ L++G C ++ +
Sbjct: 183 TYNTLIHGLCV-KQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQG 241
Query: 463 MVTK 466
M +
Sbjct: 242 MAKQ 245
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 37/290 (12%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+YSY S++ L + + A + F ++ K PD TY T+I G C + AK +
Sbjct: 146 VYSYCSIINGLCKNRKVDQAYQLFEEM-KLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLL 204
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
VM + +P+ + + +I G C ++EA M +GC P+ +T+ ++ LCI
Sbjct: 205 TVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIR 264
Query: 275 GRV---------------------------------DEAKMLMAKMRLNGFKDNVSTHKS 301
++ D A L+ KM G NV T+ +
Sbjct: 265 RKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTA 324
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
KGL + +A R ++E + PD+ +Y V+++GFCK + D A +++ M G
Sbjct: 325 FFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSG 384
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L P + ++N + G+++ LL M P+ +++T++ GL
Sbjct: 385 LPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGL 434
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y + L R A ++ + V P +V TYT +G A + F M
Sbjct: 287 YTPIFRELGRRRGFDRAARLLQKMARRGVAP-NVVTYTAFFKGLGDWKEGMRAYREFRRM 345
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
++P+++AYN +++GFCK L+ A+K + M G PN +TYN ++ C G+V
Sbjct: 346 LEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKV 405
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
+ L+ M G + +V+T +++ GL VG+ D A +L M
Sbjct: 406 EAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAM 451
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ + P+ SY ++ C+ GK D+A S + EM L P VF++N V L +
Sbjct: 1 IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+ RAI + MP+ P+ V+YNT++ GLC GR+ L M +G Y+
Sbjct: 61 ISRAIEFFETMPE----PDVVTYNTLLGGLC-KNGRVAQACSLFGSMEGAGITPSDVTYT 115
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKK 467
L+ +C+ E + M ++K
Sbjct: 116 TLIDVFCKMCQFETAYGLLQLMASRK 141
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL 164
H + +++NS + + LI+ +K A F + L ++ L
Sbjct: 198 HEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVL 257
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--- 221
+ L ++ A + P V YT + R + + A ++ M
Sbjct: 258 VSKLCIRRKLRPA---LSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRG 314
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
V PN++ Y G E A + M+ +G P+ + YN ++ G C R+D A+
Sbjct: 315 VAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAE 374
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
++ M +G N+ T+ +++ C GK + L ++ PDV ++ ++ G
Sbjct: 375 KMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGL 434
Query: 342 CKIGKSDEAISLLKEMRARG 361
++G+ D A S L ++G
Sbjct: 435 FRVGQVDAAYSFLNLAMSQG 454
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 179/346 (51%), Gaps = 13/346 (3%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
+ +S L +A G G A + K + +G ++Y+ L L R K F
Sbjct: 274 NVLLSGLCRA-GRMGETSALLDEMASQKMVPDG---FTYSILFDGLSRNGDSKAMLSLFG 329
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
+ +K V D T + ++ G CK G + A++V + + P + YNT+ING+C+
Sbjct: 330 KYLKNGVTIGDY-TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 388
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
GELE A +M +R +P+ +TYNA+I GLC R+ A+ L+ +M+ NG V T
Sbjct: 389 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 448
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G+ ++ L + E + P+V SY ++N FCK GK EA+++L +M
Sbjct: 449 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 508
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+ + P +NA+ VE+G D+A +L+++M P+ V+YN +I GLC + ++
Sbjct: 509 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC-NQSQIS 567
Query: 420 DVEDLVDRMIRSGHNL--DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ E++++ + S H L D Y+ L+ C GN++ + + M
Sbjct: 568 EAEEIINSL--SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 611
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 148/308 (48%), Gaps = 4/308 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+++N + V + A ++ ++ PP+ +Y +I G + G +A +VFD
Sbjct: 165 FAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFD 224
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
MT V PN + YNTMI+G K G+LE + ++M+ G +PN +TYN ++ GLC G
Sbjct: 225 EMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG 284
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R+ E L+ +M + T+ + GL G + ++ + +
Sbjct: 285 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCS 344
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++NG CK GK A +L+ + GL PT +N + + GEL+ A QM
Sbjct: 345 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 404
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ ++YN +I GLC A+ R+ + +DL+ M +G N ++ L+ Y G +E
Sbjct: 405 HIKPDHITYNALINGLCKAE-RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 463
Query: 456 VMQIAHEM 463
+ EM
Sbjct: 464 CFIVLSEM 471
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 159/313 (50%), Gaps = 5/313 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G ++ A F Q K +YN+L+ L + I A++ ++ ++N
Sbjct: 381 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM-QDN 439
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V P V T+ T+I Y + G +E V M +KPN+++Y +++N FCK G++ EA
Sbjct: 440 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 499
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+++M ++ PN YNA+I +G D+A +L+ KM+ NG ++ T+ ++KG
Sbjct: 500 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 559
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + +A + ++ + PD SY +I+ C G D+A+ L + M G+K T
Sbjct: 560 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 619
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V +++ + L G L+ L ++M Q + +P+ +N ++ ++ EDL
Sbjct: 620 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIK-AEDLR 678
Query: 426 DRMIRSGHNLDFT 438
M++ +N D T
Sbjct: 679 KEMLQKRNNHDDT 691
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 176/372 (47%), Gaps = 17/372 (4%)
Query: 105 HSLISIAASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYS 160
H+ + A +L ++ D F +K ++A G++ A+ + + +GA +S
Sbjct: 145 HADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGR--DGAPPPNAFS 202
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ + R A E F ++ + V+P + TY TMI G+ K G +E ++ D M
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHI-TYNTMIDGHIKGGDLEAGFRLRDQM 261
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+KPN + YN +++G C+ G + E ++EM ++ P+ TY+ + GL NG
Sbjct: 262 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 321
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
L K NG T +L GLC GK A L++++ A + P Y +
Sbjct: 322 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 381
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
ING+C+ G+ + A S +M++R +KP ++NA+ L + + A LL +M
Sbjct: 382 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 441
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P ++NT+I A GR +E ++ M +G + Y ++ +C+ G +
Sbjct: 442 NPTVETFNTLI----DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497
Query: 455 NVMQIAHEMVTK 466
+ I +M K
Sbjct: 498 EAVAILDDMFHK 509
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 2/242 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+L + N ++ G + ++ + + G RP+ +N + G + EA +
Sbjct: 127 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 186
Query: 284 MAKMRLNGF-KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
+ +M +G N ++ ++ G+ G+ AV + E + P+ +Y +I+G
Sbjct: 187 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 246
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K G + L +M GLKP ++N + L G + LL +M +P+
Sbjct: 247 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 306
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+Y+ + GL G + + L + +++G + S LL G C++G V ++
Sbjct: 307 TYSILFDGLSR-NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 365
Query: 463 MV 464
+V
Sbjct: 366 LV 367
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 2/144 (1%)
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP-TVFSFNAVFRILVENGELD 383
A PD ++ + G EA+ +L+ M G P FS+N V + G
Sbjct: 158 AGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGG 217
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A+ + +M + LPN ++YNT+I G + G ++ L D+M+ G + Y+ L
Sbjct: 218 DAVEVFDEMTERAVLPNHITYNTMIDGH-IKGGDLEAGFRLRDQMVCHGLKPNAITYNVL 276
Query: 444 LKGYCEEGNVENVMQIAHEMVTKK 467
L G C G + + EM ++K
Sbjct: 277 LSGLCRAGRMGETSALLDEMASQK 300
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 177/345 (51%), Gaps = 6/345 (1%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
+F ++ + KAY G V A+ + + + + L +Y++++ + + A
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNL----LAYNTMINGFCK 238
+ ++ + P+V TYT +++GYCK G +E A++V M ++ +AY MING+C+
Sbjct: 278 SLQRKGL-SPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQ 336
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+G +++A + NEM + G N YN MI GLC GR++E + ++ +M G + + +
Sbjct: 337 RGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ G C G +A R ++ + +Y ++ GFC + D+A+ L M
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
RG+ P S + + L + G+ ++A+ L K+ N +++NT+I GLC GRM
Sbjct: 457 KRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKI-GRM 515
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ E+L+DRM D Y L GYC+ G + + ++M
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKM 560
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 159/312 (50%), Gaps = 32/312 (10%)
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCK 238
H + + P++ TY +I G+CK G + A ++ M + PN+ + +++ F K
Sbjct: 592 HSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYK 651
Query: 239 KGELEEAKKCMNEMMN----RGC----------------------RPNELTYNAMIYGLC 272
+G+++EA + +++N GC + +N +I+GLC
Sbjct: 652 EGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLC 711
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM-EANMNPDV 331
+GR+ +AK L +R F + T+ S++ G G D+A LR+VM A + P++
Sbjct: 712 KSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFS-LRDVMLSAGLTPNI 770
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I G CK GK A++L +++++G+ P ++N + + G+ A L ++
Sbjct: 771 ITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQK 830
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + P ++Y+ +I GLC +G M++ L+D+MI + + ++ Y L+ GY + G
Sbjct: 831 MVEEGIQPTVITYSILIYGLC-TQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSG 889
Query: 452 NVENVMQIAHEM 463
N+E + ++ EM
Sbjct: 890 NMEEISKLYDEM 901
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 156/336 (46%), Gaps = 31/336 (9%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+++ L ++ + AEE ++ KE PPD TY T+ GYCK+G + A + +
Sbjct: 501 TFNTVINGLCKIGRMAEAEELLDRM-KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNK 559
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P++ +N+ I G + + +EM RG PN +TY A+I G C G
Sbjct: 560 MEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGN 619
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK---- 332
+ EA L +M NG NV +++ GK D+A L+ ++ +M P
Sbjct: 620 LHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTI 679
Query: 333 ----------------------SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ V+I G CK G+ +A SL + +R + P F+++
Sbjct: 680 EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYS 739
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
++ +G +D A L M PN ++YN++I GLC + G++ +L +++
Sbjct: 740 SLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKS-GKLSRAVNLFNKLQS 798
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G + + Y+ L+ YC+EG ++ +MV +
Sbjct: 799 KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEE 834
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 37/369 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQ-IENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI Y G+++ A F + + NG A +YN+LL +++I A + ++
Sbjct: 400 LIDGYCREGSMRKA---FEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
K V P ++S +T++ G K G E A ++ + N++ +NT+ING CK G +
Sbjct: 457 KRGVAPNEISC-STLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA++ ++ M C P+ LTY + G C G++ A LM KM GF +V S
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSF 575
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G + ++ + + ++P++ +Y +I G+CK G EA +L EM G+
Sbjct: 576 ITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF--------------------- 401
P VF +A+ + G++D A L+L+++ +D +P
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGN 695
Query: 402 -----VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
V +N II GLC + GR+ D + L + + D YS L+ G G+++
Sbjct: 696 PHSANVMWNVIIFGLCKS-GRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEA 754
Query: 457 MQIAHEMVT 465
+ M++
Sbjct: 755 FSLRDVMLS 763
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N ++ L + I A+ F + + +P D TY+++I G G I+ A + DVM
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLP-DNFTYSSLIHGCAASGSIDEAFSLRDVM 761
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN++ YN++I G CK G+L A N++ ++G PN +TYN +I C G+
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKT 821
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L KM G + V T+ ++ GLC G ++A+ L ++E N++P+ +Y +
Sbjct: 822 TEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTL 881
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPT 365
I+G+ K G +E L EM RGL PT
Sbjct: 882 IHGYIKSGNMEEISKLYDEMHIRGLLPT 909
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 172/383 (44%), Gaps = 23/383 (6%)
Query: 98 ITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC 157
T +LL H + A LL +S+ L+ + ++ R + AA+ F A +
Sbjct: 46 FTRLLLLHRFPA-AERLLASSSPLTPALLQAALRRV--RLDPDAALHLFRLAPSRPS--- 99
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIV--KENVVPPDVSTYTT----------MIRGYC 205
L S+ LL +L R A + E + P Y ++R +
Sbjct: 100 LVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHA 159
Query: 206 KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
G + +A VFD M +P+L + N ++N + G+ A +M G P+E
Sbjct: 160 DAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEF 219
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
T M C +GRV +A + +M G + N+ + +++ C +G + A L ++
Sbjct: 220 TVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESL 279
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG-LKPTVFSFNAVFRILVENGE 381
++P+V +Y +++ G+CK G+ +EA ++KEM+ G + ++ + + G
Sbjct: 280 QRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGR 339
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+D A + +M N YNT+I GLC GRM++V+ ++ M G D Y+
Sbjct: 340 MDDATRVRNEMRDAGIHVNLFVYNTMINGLCKL-GRMEEVQKVLQEMEDVGMRPDKYSYN 398
Query: 442 CLLKGYCEEGNVENVMQIAHEMV 464
L+ GYC EG++ ++ MV
Sbjct: 399 TLIDGYCREGSMRKAFEMCRMMV 421
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 3/206 (1%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ +I G CK G I +AK +F+ + K P+ Y+++I+G G ++EA + M+
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+ G PN +TYN++IYGLC +G++ A L K++ G N T+ +++ C GK
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A + ++E + P V +Y ++I G C G +EAI LL +M + P ++ +
Sbjct: 823 EAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLI 882
Query: 374 RILVENGELDRAILLLKQMPQMDCLP 399
+++G ++ L +M LP
Sbjct: 883 HGYIKSGNMEEISKLYDEMHIRGLLP 908
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
S+++++ G+ A+++ M G +P++ S N + LV++G+ A ++ QM
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
LP+ + + C GR+ + V+ M G ++ Y ++ YC G
Sbjct: 210 RIAGVLPDEFTVAIMAKAYC-RDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGW 268
Query: 453 VENVMQIAHEMVTKKG 468
E+ +I E + +KG
Sbjct: 269 TEDARRIL-ESLQRKG 283
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 177/345 (51%), Gaps = 6/345 (1%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
+F ++ + KAY G V A+ + + + + L +Y++++ + + A
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNL----LAYNTMINGFCK 238
+ ++ + P+V TYT +++GYCK G +E A++V M ++ +AY MING+C+
Sbjct: 278 SLQRKGL-SPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQ 336
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+G +++A + NEM + G N YN MI GLC GR++E + ++ +M G + + +
Sbjct: 337 RGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ G C G +A R ++ + +Y ++ GFC + D+A+ L M
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
RG+ P S + + L + G+ ++A+ L K+ N +++NT+I GLC GRM
Sbjct: 457 KRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKI-GRM 515
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ E+L+DRM D Y L GYC+ G + + ++M
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKM 560
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 156/336 (46%), Gaps = 31/336 (9%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+++ L ++ + AEE ++ KE PPD TY T+ GYCK+G + A + +
Sbjct: 501 TFNTVINGLCKIGRMAEAEELLDRM-KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNK 559
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P++ +N+ I G + + +EM RG PN +TY A+I G C G
Sbjct: 560 MEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGN 619
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK---- 332
+ EA L +M NG NV +++ GK D+A L+ ++ +M P
Sbjct: 620 LHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTI 679
Query: 333 ----------------------SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ V+I G CK G+ +A SL + +R + P F+++
Sbjct: 680 EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYS 739
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
++ +G +D A L M PN ++YN++I GLC + G++ +L +++
Sbjct: 740 SLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKS-GKLSRAVNLFNKLQS 798
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G + + Y+ L+ YC+EG ++ +MV +
Sbjct: 799 KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEE 834
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 37/369 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQ-IENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI Y G+++ A F + + NG A +YN+LL +++I A + ++
Sbjct: 400 LIDGYCREGSMRKA---FEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
K V P ++S +T++ G K G E A ++ + N++ +NT+ING CK G +
Sbjct: 457 KRGVAPNEISC-STLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA++ ++ M C P+ LTY + G C G++ A LM KM GF +V S
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSF 575
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G + ++ + + ++P++ +Y +I G+CK G EA +L EM G+
Sbjct: 576 ITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF--------------------- 401
P VF +A+ + G++D A L+L+++ +D +P
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGN 695
Query: 402 -----VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
V +N II GLC + GR+ D + L + + D YS L+ G G+++
Sbjct: 696 PHSANVMWNVIIFGLCKS-GRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEA 754
Query: 457 MQIAHEMVT 465
+ M++
Sbjct: 755 FSLRDVMLS 763
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 172/383 (44%), Gaps = 23/383 (6%)
Query: 98 ITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC 157
T +LL H + A LL +S+ L+ + ++ R + AA+ F A +
Sbjct: 46 FTRLLLLHRFPA-AERLLASSSPLTPALLQAALRRV--RLDPDAALHLFRLAPSRPS--- 99
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIV--KENVVPPDVSTYTT----------MIRGYC 205
L S+ LL +L R A + E + P Y ++R +
Sbjct: 100 LVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHA 159
Query: 206 KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
G + +A VFD M +P+L + N ++N + G+ A +M G P+E
Sbjct: 160 DAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEF 219
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
T M C +GRV +A + +M G + N+ + +++ C +G + A L ++
Sbjct: 220 TVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESL 279
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG-LKPTVFSFNAVFRILVENGE 381
++P+V +Y +++ G+CK G+ +EA ++KEM+ G + ++ + + G
Sbjct: 280 QRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGR 339
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+D A + +M N YNT+I GLC GRM++V+ ++ M G D Y+
Sbjct: 340 MDDATRVRNEMRDAGIHVNLFVYNTMINGLCKL-GRMEEVQKVLQEMEDVGMRPDKYSYN 398
Query: 442 CLLKGYCEEGNVENVMQIAHEMV 464
L+ GYC EG++ ++ MV
Sbjct: 399 TLIDGYCREGSMRKAFEMCRMMV 421
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 146/293 (49%), Gaps = 48/293 (16%)
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCK 238
H + + P++ TY +I G+CK G + A ++ M + PN+ + +++ F K
Sbjct: 592 HSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYK 651
Query: 239 KGELEEAKKCMNEMMN----RGC----------------------RPNELTYNAMIYGLC 272
+G+++EA + +++N GC + +N +I+GLC
Sbjct: 652 EGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLC 711
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM-EANMNPDV 331
+GR+ +AK L +R F + T+ S++ G G D+A LR+VM A + P++
Sbjct: 712 KSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFS-LRDVMLSAGLTPNI 770
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV-------------FRI--- 375
+Y +I G CK GK A++L +++++G+ P ++N + F++
Sbjct: 771 ITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQK 830
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+VE G ++ AI LL QM + + PN+++Y T+I G + G M+++ L D M
Sbjct: 831 MVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGY-IKSGNMEEISKLYDEM 882
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N ++ L + I A+ F + + +P D TY+++I G G I+ A + DVM
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLP-DNFTYSSLIHGCAASGSIDEAFSLRDVM 761
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN++ YN++I G CK G+L A N++ ++G PN +TYN +I C G+
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKT 821
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L KM G+ ++A+ L ++E N++P+ +Y +
Sbjct: 822 TEAFKLKQKMVEEGY-------------------MEEAIKLLDQMIENNVDPNYITYCTL 862
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPT 365
I+G+ K G +E L EM RGL PT
Sbjct: 863 IHGYIKSGNMEEISKLYDEMHIRGLLPT 890
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
S+++++ G+ A+++ M G +P++ S N + LV++G+ A ++ QM
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
LP+ + + C GR+ + V+ M G ++ Y ++ YC G
Sbjct: 210 RIAGVLPDEFTVAIMAKAYC-RDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGW 268
Query: 453 VENVMQIAHEMVTKKG 468
E+ +I E + +KG
Sbjct: 269 TEDARRIL-ESLQRKG 283
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 174/364 (47%), Gaps = 43/364 (11%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ FHQ ++ + Y ++G L ++N + LA +F ++V+ + PD TYT ++
Sbjct: 106 ALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCL-PDKVTYTVLV 164
Query: 202 RGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
K E ++F+ M K P L+ Y T++NG+CK G +++A M + G
Sbjct: 165 HSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRS 224
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P+ Y+ +I GLC + R DEA+ L +M +D V + S + GLC GK D+A
Sbjct: 225 PSGSLYSTLIDGLCKHDRHDEARELF-EMAAGDVQD-VIVYTSFISGLCKAGKLDEAKAV 282
Query: 319 LRNVMEANMNPDVKSYEVVI-----------------------------------NGFCK 343
++EA PD SY V+I +G CK
Sbjct: 283 HVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCK 342
Query: 344 IGKSDEAISLLKEMRARGLK-PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ +EA +L+ M G + P+V +++AV L + LD A ++L++M + C+P+ V
Sbjct: 343 SRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVV 402
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+Y II C GR+ + +L RM G LD Y+ L++GYC V+ + + E
Sbjct: 403 TYTAIIDAFCKV-GRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEE 461
Query: 463 MVTK 466
M +
Sbjct: 462 MAGR 465
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 154/306 (50%), Gaps = 8/306 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ ++ Y G + A+ + K Y++L+ L + + A E F
Sbjct: 196 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAG 255
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ DV YT+ I G CK G ++ AK V M P+ ++YN +I CK +
Sbjct: 256 D---VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVS 312
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK-DNVSTHKSM 302
EAK+ M++ M R C P ++ GLC + RV+EA +++ +M G + +V T+ ++
Sbjct: 313 EAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAV 372
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC + D A L+ + A PDV +Y +I+ FCK+G+ DEA L + M RG
Sbjct: 373 IDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGC 432
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
V ++N + R ++D AI ++++M PN VS +TI+ GLC + R+++
Sbjct: 433 ALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLC-KESRVEEAR 491
Query: 423 DLVDRM 428
L+++M
Sbjct: 492 LLMEKM 497
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 161/367 (43%), Gaps = 49/367 (13%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP---PDVSTYTTMIRGYCKMGMIENA-- 213
Y+ NSLL V V + A +++ K+ +V PD TY T+IRG+CK I A
Sbjct: 18 YTCNSLLEVFVNDGCHREA----YRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVN 73
Query: 214 ---------------------KKVFDV---------------MTVKPNLLAYNTMINGFC 237
+K+ ++ M VKP+ Y +I C
Sbjct: 74 LLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLC 133
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K +L+ A M+ GC P+++TY +++ L + ++ + +M G +
Sbjct: 134 KINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 193
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ G C G+ DQA+ +R + +P Y +I+G CK + DEA L EM
Sbjct: 194 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EM 252
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
A G V + + L + G+LD A + +M + C P+ VSYN II LC R
Sbjct: 253 -AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLC-KDNR 310
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFL 477
+ + ++L+D+ + + + L+ G C+ VE I M+ R + +
Sbjct: 311 VSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTY- 369
Query: 478 TRVVDAL 484
+ V+D L
Sbjct: 370 SAVIDGL 376
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 83/139 (59%), Gaps = 4/139 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++++ L + + + A ++ + VP DV TYT +I +CK+G ++ A+++F
Sbjct: 368 TYSAVIDGLCKADRLDDAYVVLQKMRRAGCVP-DVVTYTAIIDAFCKVGRLDEARELFQR 426
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + +++AYN +I G+C+ +++EA + EM RG +PN ++ + ++ GLC R
Sbjct: 427 MHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESR 486
Query: 277 VDEAKMLMAKMRLNGFKDN 295
V+EA++LM KM D+
Sbjct: 487 VEEARLLMEKMNFESLPDS 505
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 1/208 (0%)
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G + N T N+++ +G EA + + F+ + T+ ++++G C + QA
Sbjct: 12 GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
V L + A + P + ++ +I C++ +D+A+ + +M +KP F + V
Sbjct: 72 VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L + +LD A ++M Q CLP+ V+Y ++ L A + + + + M+ GH+
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKA-CKWEQGHQIFEEMLSKGHSP 190
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ Y+ ++ GYC+ G ++ + + +
Sbjct: 191 ELVTYATVVNGYCKAGRIDQALSLMRRL 218
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
AK R GF+ N T S+L+ G +A ++ + PD +Y +I GFCK
Sbjct: 7 AKAR-PGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKA 65
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
+ +A++LL EM+A G+ PT+ +F ++ R L E D+A+ + QM M P+ Y
Sbjct: 66 EQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLY 125
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+I LC ++ +RM++SG D Y+ L+ + E QI EM+
Sbjct: 126 TVVIGHLCKIN-KLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEML 184
Query: 465 TKKGRLLKLKNFLT---------RVVDALLLMWIVTG 492
+ KG +L + T R+ AL LM + G
Sbjct: 185 S-KGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKG 220
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 205/407 (50%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLI--------------------SIAASLLKNSNKL 121
+P + + HT Y + L +H ++ ++ A++L+ L
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTL 62
Query: 122 -SDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEENL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L E + N M G +P+ TY+ +I GLC ++D+A +L +M G N
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP F++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 185/389 (47%), Gaps = 49/389 (12%)
Query: 150 KQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+++ N C+ ++YN+++ + + ++ A E + + VP D TY ++I G C
Sbjct: 208 RRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVP-DRVTYCSLINGLCA 266
Query: 207 MGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G +E A ++F+ +KP+L+ YN+++ G C++G + A + MNEM+ GC P+ T
Sbjct: 267 EGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWT 326
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YN +I GLC G + +A ++M + G+ +V T +M+ G C K D A+ + +
Sbjct: 327 YNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMW 386
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ PD +Y V+NG CK GK+ E +EM +G +P ++N + + +L+
Sbjct: 387 MYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLE 446
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCM------------------------------ 413
A ++ +M Q +P+ +S+NT+I G C
Sbjct: 447 EASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 506
Query: 414 ----AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK-- 467
+K MQ E + MI G+ D Y L+ G C+ NV+ EMV+K
Sbjct: 507 GAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFV 566
Query: 468 ------GRLLKLKNFLTRVVDALLLMWIV 490
GR+L RV +A+ ++ I+
Sbjct: 567 PSMATFGRVLNSLAMNHRVSEAVAIIHIM 595
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 159/314 (50%), Gaps = 8/314 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT--TMIRGYCKMGMIENAKKVF 217
++N++L L + I + +++K + V+ +T IRG C+ G +E A +
Sbjct: 117 TFNNVLHALCQKGDIMESGALLAKVLKRGM---SVNKFTCNIWIRGLCEGGRLEEAVALV 173
Query: 218 DVMT--VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ M + P+++ YNT++ G CK +++EA + + MMN+GC P++ TYN +I G C
Sbjct: 174 ESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRD 233
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ EA L+ GF + T+ S++ GLC G ++A+ ++ PD+ Y
Sbjct: 234 MLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYN 293
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++ G C+ G A+ ++ EM G P ++++N V L + G + A +++
Sbjct: 294 SLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVK 353
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
LP+ ++NT+I G C + ++ LV+RM G D Y+ +L G C+ G +
Sbjct: 354 GYLPDVFTFNTMIDGYC-KRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKE 412
Query: 456 VMQIAHEMVTKKGR 469
V + EM+ K R
Sbjct: 413 VNETFEEMILKGCR 426
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 164/345 (47%), Gaps = 41/345 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE-------- 211
+YN+++ LV A + + +++ V P D T+T I+ +C G
Sbjct: 12 AYNAIMDALVNTAYHDQAHKVYVRMLSAGVAP-DARTHTVRIKSFCITGRPHVALRLLRS 70
Query: 212 ---------------------------NAKKVFDVM---TVKPNLLAYNTMINGFCKKGE 241
+A+ +FD M V P++ +N +++ C+KG+
Sbjct: 71 LPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGD 130
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ E+ + +++ RG N+ T N I GLC GR++EA L+ M +V T+ +
Sbjct: 131 IMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNT 189
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+++GLC K +A YLR +M PD +Y +I+G+CK EA LLK+ +G
Sbjct: 190 LMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKG 249
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P ++ ++ L G+++RA+ L + D P+ V YN+++ GLC +G +
Sbjct: 250 FVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLC-RQGLILHA 308
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+++ M+ G + D Y+ ++ G C+ GN+ + + ++ + K
Sbjct: 309 LQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVK 353
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 9/260 (3%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
+ PD TY +++ G CK G + + F+ M +K PN + YN +I FCK +LEEA
Sbjct: 390 IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 449
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ M G P+ +++N +I+G C NG +D A +L K+ G+ T ++
Sbjct: 450 GVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAY 509
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
A ++ PD+ +Y V+++G CK D A L EM ++G P++
Sbjct: 510 SSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSM 569
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+F V L N + A+ ++ M +M +P V +TI L K + + LV+
Sbjct: 570 ATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTI---LSTDKKEIAAPKILVE 624
Query: 427 RMIRSGHNLDFTMYSCLLKG 446
+++ GH + + Y L +G
Sbjct: 625 ELMKKGH-ISYPTYEVLHEG 643
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 117/250 (46%), Gaps = 2/250 (0%)
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
D+ P AYN +++ ++A K M++ G P+ T+ I CI GR
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
A L+ + G + ++++GL G A ++ ++ PDV ++
Sbjct: 61 PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
V++ C+ G E+ +LL ++ RG+ F+ N R L E G L+ A+ L++ M
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY- 179
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+YNT++ GLC ++Q+ + RM+ G D Y+ ++ GYC+ ++
Sbjct: 180 IAPDVVTYNTLMRGLC-KDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEA 238
Query: 457 MQIAHEMVTK 466
++ + + K
Sbjct: 239 TELLKDAIFK 248
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 188/362 (51%), Gaps = 12/362 (3%)
Query: 107 LISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSL 164
L SI +LK + + + LIK G A+ FH + +G L SY L
Sbjct: 64 LFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALL-FHD-HVVAHGFKLDQVSYAIL 121
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK- 223
+ L ++ + A Q++++ V DV Y+T+I CK + +A +++ M K
Sbjct: 122 MNGLCKMGETRAA----MQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177
Query: 224 --PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
PN+ ++ +++ CK + ++A + MM +G +PN +TY A++ G C+ +V++A
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+ M G + NV + ++ GLC + D+A+ + + +NPDV +Y ++I+G
Sbjct: 238 NIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGL 297
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK+GK ++ L+ EMR+ G + ++N++ L +N LD+AI L+K++ PN
Sbjct: 298 CKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNV 357
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
+Y T+I GLC GR++D + ++ G+++ Y+ ++ G C++G + + +
Sbjct: 358 CTYTTLIDGLC-KDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLS 416
Query: 462 EM 463
M
Sbjct: 417 RM 418
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 150/278 (53%), Gaps = 5/278 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+++ L+ L + K A ++K+ V P+V TY ++ GYC + + A +F
Sbjct: 182 VYTFSILVDALCKDRKGKQAMNLLAMMMKKGV-KPNVVTYGAIMDGYCLVNQVNKALNIF 240
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+VM V+PN+ YN +ING CKK ++EA EM + P+ +TYN +I GLC
Sbjct: 241 NVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKL 300
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++ + L+ +MR G ++ T+ S+L LC DQA+ ++ + + + P+V +Y
Sbjct: 301 GKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTY 360
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G CK G+ ++A + +E+ G TV+++N + L + G D A+ LL +M
Sbjct: 361 TTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMED 420
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
C+P+ VSY TII L KG L+ MI G
Sbjct: 421 NACIPDAVSYETIIYALS-EKGETVKTNKLLCAMIVRG 457
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 162/351 (46%), Gaps = 43/351 (12%)
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
QI + +N +L LV++N A F Q+ + N + P + T T ++ YC G I
Sbjct: 3 QISPTPPILQFNHILASLVKINHYPTAISLFRQL-EFNGIKPSIVTLTILMNCYCHTGGI 61
Query: 211 ENAKKVFDVMT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
+F ++T +PN + + T+I G C G+ EA + ++ G + ++++Y
Sbjct: 62 TF---LFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSY 118
Query: 265 NAMIYGLCINGR--------------------------------VDEAKMLMAKMRLNGF 292
++ GLC G V +A L ++M G
Sbjct: 119 AILMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGI 178
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
NV T ++ LC K QA+ L +M+ + P+V +Y +++G+C + + ++A++
Sbjct: 179 FPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALN 238
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+ M G++P V+ +N + L + +D A+ L K+M P+ V+YN +I GLC
Sbjct: 239 IFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLC 298
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G++ +LVD M G +D Y+ LL C+ +++ + + E+
Sbjct: 299 KL-GKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEI 348
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 128/246 (52%), Gaps = 4/246 (1%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
+KP+++ ++N +C G + + +++ G PN +T+ +I G+C+NG+ EA
Sbjct: 41 IKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEAL 100
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+ + +GFK + ++ ++ GLC +G+ A+ LR +N DV Y +I+
Sbjct: 101 LFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRKTW---VNADVVMYSTIIDSL 157
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK +A L EM A+G+ P V++F+ + L ++ + +A+ LL M + PN
Sbjct: 158 CKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNV 217
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
V+Y I+ G C+ ++ ++ + M++ G + Y+ ++ G C++ V+ M +
Sbjct: 218 VTYGAIMDGYCLV-NQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFK 276
Query: 462 EMVTKK 467
EM KK
Sbjct: 277 EMHWKK 282
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++ YN ++ L + + A F ++ + + PDV TY +I G CK+G I + ++
Sbjct: 252 VWCYNIIINGLCKKKRVDEAMNLFKEMHWKKI-NPDVVTYNILIDGLCKLGKISTSLELV 310
Query: 218 DVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +++ YN++++ CK L++A + E+ ++G +PN TY +I GLC +
Sbjct: 311 DEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKD 370
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+++A ++ ++ G+ V T+ M+ GLC G FD+A+ L + + PD SY
Sbjct: 371 GRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSY 430
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGL 362
E +I + G++ + LL M RGL
Sbjct: 431 ETIIYALSEKGETVKTNKLLCAMIVRGL 458
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSN--KLSDFFISK 128
AL FN PN + CY I + L + A +L K + K++ ++
Sbjct: 236 ALNIFNVMVQEGVEPNVW-----CYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTY 290
Query: 129 --LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI G + ++ + + I + +YNSLL L + + + A +I K
Sbjct: 291 NILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEI-K 349
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELE 243
+ + P+V TYTT+I G CK G +E+A +F + + + YN MING CKKG +
Sbjct: 350 DQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFD 409
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
EA ++ M + C P+ ++Y +IY L G + L+ M + G
Sbjct: 410 EALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+++ + P + + ++ KI AISL +++ G+KP++ + + G
Sbjct: 1 MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+ +L ++ +M PN +++ T+I G+C+ G+ + D ++ G LD Y+
Sbjct: 61 ITFLFSILTKILKMGYEPNSITFTTLIKGMCL-NGQAYEALLFHDHVVAHGFKLDQVSYA 119
Query: 442 CLLKGYCEEGNVENVMQI 459
L+ G C+ G MQ+
Sbjct: 120 ILMNGLCKMGETRAAMQM 137
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 167/309 (54%), Gaps = 5/309 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++N L+ L + I A+ + K PD+ TY ++ GYC + A+++F+
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M ++P++L YN +I+G+CK ++EA E+ N+ P +YN++I GLC +G
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R+ K L+ +M + +V T+ ++ LC G+ +A+G L +M+ + P++ +Y
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++G+C + A + M GL+P + ++N + + +D AI+L K+M
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ +P+ SYN++I GLC GR+ V++L+D M SG + D Y+ LL +C+ +
Sbjct: 505 NLIPDIASYNSLIDGLCNL-GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDK 563
Query: 456 VMQIAHEMV 464
+ + ++V
Sbjct: 564 AISLFRQIV 572
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 189/389 (48%), Gaps = 15/389 (3%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLI----SIAASLLKNSNKLSDFFISKLIKAYGDRG 137
N +P+ Y + + D L I + A + K K + L++ Y R
Sbjct: 260 NVDPDDY-----TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRE 314
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
NV A F++ + + +YN L+ + + A F ++ +N+VP +++Y
Sbjct: 315 NVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPT-IASY 373
Query: 198 TTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
++I G C G I + KK+ D M P+++ YN +I+ CK+G + EA + MM
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G +PN +TYNAM+ G C+ V+ AK + +M +G + ++ + ++ G C D+
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+ + + N+ PD+ SY +I+G C +G+ LL EM G P V ++N +
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+ D+AI L +Q+ + P+F + + I+ LC + +++ ED + ++ G +
Sbjct: 554 AFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGE-KLKMAEDALKHLLMHGCS 611
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ Y+ L+ C++G+ M + +M
Sbjct: 612 PNVQTYTILINALCKDGSFGEAMLLLSKM 640
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 194/384 (50%), Gaps = 19/384 (4%)
Query: 86 NKYHHTTPCYTAITDVLLSHSLIS-IAASLLKNSNKLSDFFISKLI-KAYGDRGNVKAAI 143
N Y H + +TA LL+ L S +L+ + ++ F I+ +I KA N+ A
Sbjct: 98 NCYFHQS--HTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155
Query: 144 FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
+ F Q ++Y +L+ L + IK A ++ K +V P++ Y+ +I G
Sbjct: 156 YLFDQ----------FTYGTLINGLSKNGQIKAALHLLQEMEKSSV-QPNLVMYSALIDG 204
Query: 204 YCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
CK G + +A + + + LL YN++I+G C G +E + + +M+ P+
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+ T+N +I LC GR+ EA+ ++A M G K ++ T+ ++++G C +A
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+++ + PDV +Y V+I+G+CK DEA+ L KE+ + L PT+ S+N++ L +G
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+ LL +M P+ V+YN +I LC +GR+ + ++ M++ G + Y
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALC-KEGRILEALGVLVMMMKKGVKPNIVTY 443
Query: 441 SCLLKGYCEEGNVENVMQIAHEMV 464
+ ++ GYC NV I + MV
Sbjct: 444 NAMMDGYCLRNNVNVAKDIFNRMV 467
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 143/279 (51%), Gaps = 5/279 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCM 249
D TY T+I G K G I+ A + M +V+PNL+ Y+ +I+G CK G + +A
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+++ RG + +TYN++I G C GR E L+ KM + T ++ LC
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G+ +A G L + + PD+ +Y ++ G+C EA L M RGL+P V ++
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + + +D A++L K++ + +P SYN++I GLC + GR+ V+ L+D M
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNS-GRISHVKKLLDEMH 397
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
S D Y+ L+ C+EG + + + M+ KKG
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVL-VMMMKKG 435
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 163/332 (49%), Gaps = 5/332 (1%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
NV A+ F++ ++ ++ LLG +VR+ A F Q+ + + P ++T+
Sbjct: 35 NVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGI-SPSIATF 93
Query: 198 TTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T +I Y A + + +PNL+ +NT+INGFC G + +A ++
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G ++ TY +I GL NG++ A L+ +M + + N+ + +++ GLC G
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+G + E + D +Y +I+G C +G+ E LL +M + P ++FN +
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L + G + A +L M + P+ V+YN ++ G C ++ + + +L +RM++ G
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYC-SRENVHEARELFNRMVKRGLE 332
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ L+ GYC+ V+ M + E+ K
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK 364
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 153/341 (44%), Gaps = 39/341 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y V A+ F + + SYNSL+ L I ++ ++ +
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM-HGS 399
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
PPDV TY +I CK G I A V +M VKPN++ YN M++G+C + + A
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K N M+ G P+ L YN +I G C VDEA +L +MR +++++ S++ G
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL------------ 353
LC +G+ L + ++ +PDV +Y ++++ FCK D+AISL
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDF 579
Query: 354 ----------------------LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
LK + G P V ++ + L ++G A+LLL +
Sbjct: 580 YTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSK 639
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
M D P+ +++ II G+ + + E L + MI G
Sbjct: 640 MEDNDRPPDAITFEIII-GVLLQRNETDKAEKLREEMIARG 679
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 121/242 (50%), Gaps = 38/242 (15%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YN+++ N++ +A++ F+++VK + PD+ Y +I GYCK M++ A +F
Sbjct: 440 IVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL-EPDILNYNVLINGYCKTEMVDEAIVLF 498
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P++ +YN++I+G C G + ++ ++EM + G P+ +TYN ++ C
Sbjct: 499 KEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKT 558
Query: 275 GRVDEA-----------------------------KMLMAK-----MRLNGFKDNVSTHK 300
D+A K+ MA+ + ++G NV T+
Sbjct: 559 QPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYT 618
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ LC G F +A+ L + + + PD ++E++I + ++D+A L +EM AR
Sbjct: 619 ILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIAR 678
Query: 361 GL 362
GL
Sbjct: 679 GL 680
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 1/157 (0%)
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C D AV ++ P ++ ++ ++G AISL +++++G+ P++
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+F + A LL + + PN V++NTII G C+ G + D
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCI-NGMIFKALDFCQ 149
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ G+ D Y L+ G + G ++ + + EM
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 180/370 (48%), Gaps = 43/370 (11%)
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
+R ++ +++ + KQI +YS+N L+ + + A F +I K + PDV
Sbjct: 93 ERPDLVISLYQKMERKQIRCD--IYSFNILIKCFCSCSKLPFALSTFGKITKLGL-HPDV 149
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
T+TT++ G C + A +F M T +PN++ + T++NG C++G + EA ++
Sbjct: 150 VTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDR 209
Query: 252 MMNRGCRPNELTYNAMIYG------------------------------------LCING 275
MM G +P ++TY ++ G LC +G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R +A+ L +M+ G ++ T+ SM+ G C G++ A L+ ++E ++PDV +Y
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+IN F K GK EA L EM RG+ P +++++ + LD A + M
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C PN +++NT+I G C AK R+ D +L+ M +G D T Y+ L+ G+ G++
Sbjct: 390 GCSPNLITFNTLIDGYCGAK-RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNA 448
Query: 456 VMQIAHEMVT 465
+ + EM++
Sbjct: 449 ALDLLQEMIS 458
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 192/389 (49%), Gaps = 20/389 (5%)
Query: 95 YTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y+AI D L S A +L ++ D F + +I + G A +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + + +YN+L+ V+ AEE + +++ ++P + TY++MI G+CK +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI-TYSSMIDGFCKQNRL 376
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ +F +M K PNL+ +NT+I+G+C +++ + ++EM G + TYN +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-- 325
I+G + G ++ A L+ +M +G ++ T ++L GLC GK A+ + + ++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 326 ---------NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ PDV++Y ++I+G GK EA L +EM RG+ P +++++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ LD A + M PN V++ T+I G C A GR+ D +L M R G +
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA-GRVDDGLELFCEMGRRGIVAN 615
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
Y L+ G+ + GN+ + I EM++
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMIS 644
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 166/320 (51%), Gaps = 16/320 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++++ L + A+ F ++ +E + PD+ TY +MI G+C G +A+++ M
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEM-QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ YN +IN F K+G+ EA++ +EM+ RG PN +TY++MI G C R+
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A+ + M G N+ T +++ G C + D + L + E + D +Y +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM----- 392
I+GF +G + A+ LL+EM + GL P + + + + L +NG+L A+ + K M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 393 ------PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
P P+ +YN +I GL + +G+ + E+L + M G D YS ++ G
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGL-INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 447 YCEEGNVENVMQIAHEMVTK 466
C++ ++ Q+ M +K
Sbjct: 556 LCKQSRLDEATQMFDSMGSK 575
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 163/336 (48%), Gaps = 6/336 (1%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V A+ FHQ + + ++ +L+ L R I A +++++ + P + TY
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI-TYG 223
Query: 199 TMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T++ G CK G +A +K+ +V + PN++ Y+ +I+ CK G +A+ EM
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G P+ TYN+MI G C +GR +A+ L+ +M +V T+ +++ GKF +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A ++ + P+ +Y +I+GFCK + D A + M +G P + +FN +
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+D + LL +M + + + +YNT+I G + G + DL+ MI SG
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV-GDLNAALDLLQEMISSGLC 462
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
D LL G C+ G +++ +++ M K L
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 126/246 (51%), Gaps = 2/246 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ ++ ++N +I FC +L A ++ G P+ +T+ +++GLC+ RV EA
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L +M + NV T +++ GLC G+ +AV L +ME + P +Y +++G
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 342 CKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CK G + A++LL++M + P V ++A+ L ++G A L +M + P+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+YN++I G C + GR D E L+ M+ + D Y+ L+ + +EG ++
Sbjct: 290 LFTYNSMIVGFC-SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348
Query: 461 HEMVTK 466
EM+ +
Sbjct: 349 DEMLPR 354
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 15/278 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y + + H+ + A +YN+L+ V + A + +++
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------VKPNLLAYNTMIN 234
+ P D+ T T++ G C G +++A ++F VM V+P++ YN +I+
Sbjct: 461 LCP-DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
G +G+ EA++ EM +RG P+ +TY++MI GLC R+DEA + M F
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
NV T +++ G C G+ D + + + + +Y +I GF K+G + A+ +
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIF 639
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+EM + G+ P + + L EL RA+ +L+++
Sbjct: 640 QEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 139/299 (46%), Gaps = 15/299 (5%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I + + + AA F+ L ++N+L+ I E H++ +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+V D +TY T+I G+ +G + A + M P+++ +T+++G C G+L+
Sbjct: 424 TGLVA-DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 244 EAKKCMNEMMNR-----------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+A + M G P+ TYN +I GL G+ EA+ L +M G
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ T+ SM+ GLC + D+A ++ + +P+V ++ +ING+CK G+ D+ +
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L EM RG+ ++ + + G ++ A+ + ++M P+ ++ ++ GL
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 2/219 (0%)
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M + R + ++N +I C ++ A K+ G +V T ++L GLCV
Sbjct: 103 QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVE 162
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ +A+ + E P+V ++ ++NG C+ G+ EA++LL M GL+PT ++
Sbjct: 163 DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222
Query: 370 NAVFRILVENGELDRAILLLKQMPQMD-CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ + + G+ A+ LL++M ++ +PN V Y+ II LC GR D ++L M
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC-KDGRHSDAQNLFTEM 281
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G D Y+ ++ G+C G + Q+ EM+ +K
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 17/245 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI + G++ AA+ + I +G C + + ++LL L +K A E F + K
Sbjct: 436 LIHGFYLVGDLNAALDLLQE--MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Query: 187 E----------NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
N V PDV TY +I G G A+++++ M + P+ + Y++MI
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G CK+ L+EA + + M ++ PN +T+ +I G C GRVD+ L +M G
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
N T+ +++ G VG + A+ + ++ + + PD + ++ G + A+++
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673
Query: 354 LKEMR 358
L++++
Sbjct: 674 LEKLQ 678
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 107/234 (45%), Gaps = 2/234 (0%)
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+GF + LE+A ++M+ P+ + + ++ + R D L KM +
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
++ + ++K C K A+ + + ++PDV ++ +++G C + EA++L
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNL 171
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
+M +P V +F + L G + A+ LL +M + P ++Y TI+ G+C
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC- 230
Query: 414 AKGRMQDVEDLVDRMIRSGHNL-DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
KG +L+ +M H + + +YS ++ C++G + + EM K
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+S++ L + + + A + F + ++ P+V T+TT+I GYCK G +++ ++F
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSF-SPNVVTFTTLINGYCKAGRVDDGLELFCE 606
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + N + Y T+I GF K G + A EM++ G P+ +T M+ GL
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666
Query: 277 VDEAKMLMAKMRLN 290
+ A ++ K++++
Sbjct: 667 LKRAVAMLEKLQMS 680
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 182/356 (51%), Gaps = 20/356 (5%)
Query: 126 ISKLIKAYGDRG--NVKAAIFWFHQAKQIENGACLY-------------SYNSLLGVLVR 170
+ ++++ YGD + A I F +A QI++ ++ +YN ++G L
Sbjct: 119 VMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCS 178
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLL 227
++LA E +++K+ P V TYT +I G I A ++FD + ++P+L
Sbjct: 179 RGKLELAFEVMDELLKDGC-KPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLY 237
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YN +I G CK+G + A + + RGC P+ ++YN ++ R ++ + LM M
Sbjct: 238 TYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDM 297
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
L+G + NV TH ++ C G+ +AV L + E + PD SY+ +I+ FCK G+
Sbjct: 298 VLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRL 357
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
D AI L++M + G P + ++N + L + G D A+ + +++ ++ C P +YNT+
Sbjct: 358 DLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTM 417
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L +++ +E ++ MIR G + D Y+ L+ C +G V+ + + +M
Sbjct: 418 FSALWSCGNKIKALE-MISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM 472
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 154/288 (53%), Gaps = 3/288 (1%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV--KPNLLAYNTMINGFC 237
+F + V PDV T +I+G+ ++ A +V +++ P++ +YN MI+GF
Sbjct: 83 YFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFS 142
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K +++ A + + M +RG P+ +TYN MI LC G+++ A +M ++ +G K +V
Sbjct: 143 KANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVI 202
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ + G+ ++A+ ++ + PD+ +Y +I G CK G D A+ ++ +
Sbjct: 203 TYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHL 262
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
ARG P V S+N + R + + L+K M C PN V+++ +I C +GR
Sbjct: 263 SARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFC-REGR 321
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+++ ++++ M G D Y L+ +C+EG ++ ++ +MV+
Sbjct: 322 VREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 170/376 (45%), Gaps = 46/376 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+I + RG ++ A F ++ C + +Y L+ + I A E F ++V
Sbjct: 172 MIGSLCSRGKLELA---FEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELV 228
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
+ PD+ TY +IRG CK GM + A ++ + P++++YN ++ F K
Sbjct: 229 SRGL-RPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRW 287
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E+ ++ M +M+ GC PN +T++ +I C GRV EA ++ M+ G + ++ +
Sbjct: 288 EDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPL 347
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD-------------- 348
+ C G+ D A+ YL ++ PD+ +Y ++ CK G +D
Sbjct: 348 ISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGC 407
Query: 349 ---------------------EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+A+ ++ EM +G+ P ++N++ L +G +D AI
Sbjct: 408 PPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIG 467
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LL M P +S+N ++ G+C A + +E L+ M+ G + T Y L++G
Sbjct: 468 LLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLI-TMVEKGCLPNETSYVLLIEGI 526
Query: 448 CEEGNVENVMQIAHEM 463
G M++A+ +
Sbjct: 527 AYAGWRAEAMELANSL 542
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 132/246 (53%), Gaps = 3/246 (1%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
KP+++ +I GF L++A + M E++ P+ +YNAMI G ++D A
Sbjct: 94 KPDVVLCTKLIKGFFNSRNLKKAMRVM-EILETYGDPDVYSYNAMISGFSKANQIDSANQ 152
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
+ +MR GF +V T+ M+ LC GK + A + +++ P V +Y ++I
Sbjct: 153 VFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATI 212
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
G+ +EA+ L E+ +RGL+P ++++NA+ R + + G DRA+ ++ + C P+ V
Sbjct: 213 LEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVV 272
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
SYN ++ + K R +D E L+ M+ SG + +S L+ +C EG V + + E
Sbjct: 273 SYNILLRSF-LNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVL-E 330
Query: 463 MVTKKG 468
++ +KG
Sbjct: 331 VMKEKG 336
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 130/273 (47%), Gaps = 21/273 (7%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI ++ G V+ A+ K+ YSY+ L+ + + LA E+ ++V
Sbjct: 310 SILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELE 243
+ +P D+ Y T++ CK G + A VF D + P + AYNTM + G
Sbjct: 370 DGCLP-DIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKI 428
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + ++EM+ +G P+E+TYN++I LC +G VDEA L+ M F+ V + +L
Sbjct: 429 KALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVL 488
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G+C + + + L ++E P+ SY ++I G G EA+ L
Sbjct: 489 LGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELA--------- 539
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
N+++R+ V +G D + L K P +D
Sbjct: 540 ------NSLYRLGVISG--DSSKRLNKTFPMLD 564
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 36/208 (17%)
Query: 294 DNVSTH-KSMLKGLCVVGKFDQAVGYLRNVMEANM------------------------- 327
DN H +L C GK ++++ +L +V+
Sbjct: 59 DNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMR 118
Query: 328 ---------NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+PDV SY +I+GF K + D A + MR+RG P V ++N + L
Sbjct: 119 VMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCS 178
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
G+L+ A ++ ++ + C P+ ++Y TI+ + +GR+ + +L D ++ G D
Sbjct: 179 RGKLELAFEVMDELLKDGCKPSVITY-TILIEATILEGRINEALELFDELVSRGLRPDLY 237
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ +++G C+EG + + + +
Sbjct: 238 TYNAIIRGICKEGMEDRALDFVRHLSAR 265
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 217/475 (45%), Gaps = 34/475 (7%)
Query: 58 VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL-- 115
V +++ + + A F+ AS N ++ HTT + + L+S + A +L
Sbjct: 18 VEQLLRAERDLRKAKIIFDSASAEYSNGFRHDHTT--FGVMISKLVSANEFRPAEEMLNR 75
Query: 116 --KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+ ++++ + + YG AI FH+ SY S+ +LV N
Sbjct: 76 MKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQ 135
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK-MGMIENAKKVFDVMTVK---PNLLAY 229
+K+A F+ + ++E V V + +I+ CK G I+ A ++F M + P+ Y
Sbjct: 136 LKVAMSFY-KYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTY 194
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
T+ING CK G+ EAK+ EM +GC P+ +TY+ +++GLC G VDEA L KM+
Sbjct: 195 GTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKK 254
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+ NV T+ S++ GLC G +A+ L ++ P++ +Y +ING CK GK E
Sbjct: 255 KAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAE 314
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY----- 404
A+ L M+ +GLKP + + + A L +M PN V++
Sbjct: 315 AVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVK 374
Query: 405 --NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
N ++ GLC G + L M G ++D + L+K +C++G++ +I E
Sbjct: 375 LNNMVVQGLC-TNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDE 433
Query: 463 MVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFV---FVHQVVVIMERTVE 514
MV L V + V GG W R V F VV +M VE
Sbjct: 434 MV------------LDGCVPDHGIWSAVVGGFWDRRKVREAFESIVVELMNEFVE 476
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 162/288 (56%), Gaps = 7/288 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+++++ L + + A E +++ V PDV TYTT++ G+C ++ A KVFD+M
Sbjct: 278 FSTVVDALCKEGKVTEAHEIVDMMIQRGV-EPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 336
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K P++++Y T+ING+CK ++++A EM + P+ TYN ++YGLC GR+
Sbjct: 337 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRL 396
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A L +M G ++ T+ +L LC ++A+ L+ + +N+NPD++ Y ++
Sbjct: 397 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNII 456
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G C+ G+ + A L + ++GL P+V+++N + L + G L+ A L +M DC
Sbjct: 457 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 516
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD--FTMYSCL 443
P+ +YNTI G ++ ++ L++ M+ G + D F M S L
Sbjct: 517 SPDGCTYNTIARGFLQNNETLRAIQ-LLEEMLARGFSADSCFLMLSVL 563
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 172/333 (51%), Gaps = 11/333 (3%)
Query: 137 GNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
GN AAI + +E G C + Y S++ L + + A F Q+V + + PD
Sbjct: 184 GNTSAAI---RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGI-SPD 239
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMN 250
+ TYT+++ C + ++ + + M + P+++ ++T+++ CK+G++ EA + ++
Sbjct: 240 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 299
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M+ RG P+ +TY ++ G C+ +DEA + M GF +V ++ +++ G C +
Sbjct: 300 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIH 359
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
K D+A+ + PD K+Y ++ G C +G+ +AI+L EM ARG P + +++
Sbjct: 360 KIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYS 419
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ L +N L+ A+ LLK + + P+ YN II G+C A G ++ DL +
Sbjct: 420 ILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRA-GELEAARDLFSNLSS 478
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + Y+ ++ G C+ G + ++ EM
Sbjct: 479 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 511
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 156/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ N L+ +N + A +I+K PD +T+TT+IRG C G I A +F
Sbjct: 100 VYTLNILINSFCHLNRVGFAFSVLAKILKLGH-QPDPTTFTTLIRGLCVEGKIGEALHLF 158
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +PN++ Y T+ING CK G A + + M C+P+ + Y ++I LC +
Sbjct: 159 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 218
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+V EA L ++M G ++ T+ S++ LC + ++ L ++ + + PDV +
Sbjct: 219 RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 278
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V++ CK GK EA ++ M RG++P V ++ + E+D A+ + M +
Sbjct: 279 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 338
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ +SY T+I G C ++ L + M R D Y+ L+ G C G ++
Sbjct: 339 KGFAPDVISYTTLINGYCKIH-KIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQ 397
Query: 455 NVMQIAHEMVTK 466
+ + + HEMV +
Sbjct: 398 DAIALFHEMVAR 409
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 143/279 (51%), Gaps = 4/279 (1%)
Query: 191 PPDVSTYTTMIRGYCKM---GMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK 247
PP + + ++ KM + + D V PN+ N +IN FC + A
Sbjct: 62 PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFS 121
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ +++ G +P+ T+ +I GLC+ G++ EA L KM GF+ NV T+ +++ GLC
Sbjct: 122 VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 181
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
VG A+ LR++ + N PDV Y +I+ CK + EA +L +M +G+ P +F
Sbjct: 182 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 241
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++ ++ L E LL QM LP+ V ++T++ LC +G++ + ++VD
Sbjct: 242 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC-KEGKVTEAHEIVDM 300
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI+ G D Y+ L+ G+C + ++ +++ MV K
Sbjct: 301 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK 339
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 177/376 (47%), Gaps = 40/376 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I + G V A F FH+ + +YNSL+ L + ++ A + +
Sbjct: 206 VIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG 265
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V+P D TY MIRGYC +G +E A ++ M+ ++P+++ Y+ +I +CK G EA
Sbjct: 266 VMP-DTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEA 324
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYG--------------------------------LCI 273
+ + M+ +G +PN Y+ +++G +C
Sbjct: 325 RSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICA 384
Query: 274 ---NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
+G VD+A +MR NG + +V ++ +++ LC G+ + AV + ++ ++P+
Sbjct: 385 YAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPN 444
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ S+ +I+G C IG+ + L EM RG+ P N + L + G + A
Sbjct: 445 IISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFD 504
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+ + P+ VSYNT+I G C G+M + +DRM+ G D Y+ LL GY +
Sbjct: 505 MVIHIGVKPDVVSYNTLIDGYCFV-GKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKN 563
Query: 451 GNVENVMQIAHEMVTK 466
G VE+ + + EM K
Sbjct: 564 GRVEDALALYREMFRK 579
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 204/423 (48%), Gaps = 63/423 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+ N L+ L N A + + + E PDV +Y +I+G C + A ++
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187
Query: 220 MTV------KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
MT PN+++YNT+I+GF K+GE+++A +EMM +G P+ +TYN++I GLC
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK 247
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+D+A ++ M G + T+ M++G C +G+ ++AV L+ + + + PDV +
Sbjct: 248 AQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVT 307
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKP--TVF------------------------ 367
Y ++I +CKIG+ EA S+ M +G KP T++
Sbjct: 308 YSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMI 367
Query: 368 ---------SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+FN + ++G +D+A+ +M Q P+ VSY+T+I LC GR+
Sbjct: 368 RDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILC-KTGRV 426
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT------------- 465
+D ++M+ G + + ++ L+ G C G + V ++A EM+
Sbjct: 427 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 486
Query: 466 -----KKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQV---VVIMERTVEDGK 517
K+GR+++ ++F V+ + +V+ + I + FV ++ + ++R V G
Sbjct: 487 MDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGL 546
Query: 518 RSE 520
R +
Sbjct: 547 RPD 549
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 163/299 (54%), Gaps = 6/299 (2%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+P + + +I Y K G ++ A F M ++P++++Y+T+I+ CK G +E+A
Sbjct: 371 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAV 430
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
N+M++ G PN +++ ++I+GLC G + + L +M G + +++ L
Sbjct: 431 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 490
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+ +A + V+ + PDV SY +I+G+C +GK DE+I L M + GL+P
Sbjct: 491 CKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDS 550
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+++N++ +NG ++ A+ L ++M + D ++ N ++ GL A GR+ +L
Sbjct: 551 WTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQA-GRIVAARELYM 609
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALL 485
+M+ G L Y+ +L G CE V+ +++ ++ +K+ L ++ F + V++ALL
Sbjct: 610 KMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFE-LDVRTF-SIVINALL 666
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 183/358 (51%), Gaps = 13/358 (3%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G V+ A++ F+Q + S+ SL+ L + K EE +++ + PD
Sbjct: 424 GRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGI-HPDAIF 482
Query: 197 YTTMIRGYCKMGMIENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
T++ CK G + A+ FD+ + VKP++++YNT+I+G+C G+++E+ K ++ M+
Sbjct: 483 MNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMV 542
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+ G RP+ TYN+++ G NGRV++A L +M K T ML GL G+
Sbjct: 543 SIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIV 602
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A +++ +++Y V+ G C+ DEA+ + +++R++ + V +F+ V
Sbjct: 603 AARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVI 662
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L++ G +D A L M +P+ ++Y+ +I + +G +++ ++L M ++G
Sbjct: 663 NALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKS-HIEEGLLEESDNLFLSMEKNGC 721
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVT 491
D M + +++ E+G+V A +TK + KNF A LL+ IV+
Sbjct: 722 AADSHMLNIIVRRLLEKGDVRR----AGTYLTK----IDEKNFSLEASTAALLIPIVS 771
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 151/316 (47%), Gaps = 33/316 (10%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR-GYCKMGMIENAK 214
A ++++NS+L V+ R +S + VS + TM+R G M I
Sbjct: 47 ASVHAFNSVLTVVARADS---------SSSPRHSAALAVSLFNTMVRSGVNMMAAI---- 93
Query: 215 KVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+I FC G L+ A + G R +T N +I GLC
Sbjct: 94 --------------IGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDG 139
Query: 275 GRVDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA---NMNPD 330
R D+A M+ +M G+ +V ++ +++KGLCV K +A+ L ++ N +P+
Sbjct: 140 NRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPN 199
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V SY VI+GF K G+ D+A L EM +GL P V ++N++ L + +D+A+ +L+
Sbjct: 200 VVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQ 259
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
M +P+ +YN +I G C + G++++ L+ +M SG D YS L++ YC+
Sbjct: 260 HMFDKGVMPDTRTYNIMIRGYC-SLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKI 318
Query: 451 GNVENVMQIAHEMVTK 466
G + MV K
Sbjct: 319 GRCAEARSVFDSMVRK 334
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 203/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEENL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L E + N M G +P+ TY+ +I GLC ++D+A +L +M G N
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP F++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEM 407
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 143/271 (52%), Gaps = 1/271 (0%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
V TY TM+ GYC+ G IE+A+++ M P+ +N +I C +G + +A ++M+
Sbjct: 130 VVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDML 189
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+RGC P+ +TY+ ++ C +A +L+ +MR G + ++ T+ ++ +C G D
Sbjct: 190 HRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVD 249
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ L ++ PD +Y V+ C + E L EM + P +FN +
Sbjct: 250 EALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIV 309
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L + G +DRAI ++ M + C+P+ V+Y++I+ GLC GR+ D +L+ R+ G
Sbjct: 310 TSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDV-GRVDDAVELLSRLKSYGC 368
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D Y+ +LKG C E+ ++ EMV
Sbjct: 369 KPDTIAYTTVLKGLCSIEQWEHAEELMAEMV 399
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 161/339 (47%), Gaps = 5/339 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI+A RG V A+ F + +Y+ LL + + + A +
Sbjct: 163 FTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDE 222
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ + PD+ TY +I C G ++ A + + KP+ + Y ++ C
Sbjct: 223 M-RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSE 281
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+E ++ EM + C P+E+T+N ++ LC G VD A ++ M +G ++ T+
Sbjct: 282 RWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYS 341
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S+L GLC VG+ D AV L + PD +Y V+ G C I + + A L+ EM
Sbjct: 342 SILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCS 401
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
P +FN V L + G +DRAI +++QM + C P+ V+YN+II GLC + + D
Sbjct: 402 DCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERC-IDD 460
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+L+ + G D ++ LLKG C E+ Q+
Sbjct: 461 AMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQL 499
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 175/343 (51%), Gaps = 7/343 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S ++ D G V A+ + K +Y ++L L + + AEE ++V
Sbjct: 341 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVC 400
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ PPD T+ T+I C+ G+++ A KV + M+ P+++ YN++I+G C + ++
Sbjct: 401 SDC-PPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCID 459
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + ++ + + GC+P+ +T+N ++ GLC R ++A+ LM M + + +T +++
Sbjct: 460 DAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVI 519
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC G QA+ L+ + E P+ +Y +V++ K GK+ EA+ LL M
Sbjct: 520 TSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--T 577
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + ++N V + + G+++ A+ LL+ M P+ ++Y ++ G+C G + +
Sbjct: 578 PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRM 637
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L R+ G + D T Y+ +L G+C+ + + MV+
Sbjct: 638 LC-RLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSS 679
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 158/309 (51%), Gaps = 7/309 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+++ L + + A + + + +P D+ TY++++ G C +G +++A ++
Sbjct: 304 TFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP-DIVTYSSILDGLCDVGRVDDAVELLSR 362
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ KP+ +AY T++ G C + E A++ M EM+ C P+E+T+N +I LC G
Sbjct: 363 LKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGL 422
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD A ++ +M NG ++ T+ S++ GLC D A+ L N+ PD+ ++
Sbjct: 423 VDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNT 482
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ G C + + ++A L+ M P +FN V L + G L +AI LK M +
Sbjct: 483 LLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENG 542
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C+PN +YN ++ L + G+ Q+ L+ M + D Y+ ++ + G +E
Sbjct: 543 CIPNQSTYNIVVDAL-LKAGKTQEALKLLSGM--TNGTPDLITYNTVISNITKAGKMEEA 599
Query: 457 MQIAHEMVT 465
+ + MV+
Sbjct: 600 LDLLRVMVS 608
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 118/235 (50%), Gaps = 6/235 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N+LL L V+ + AE+ ++ + PPD +T+ T+I C+ G++ A +
Sbjct: 477 IVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDC-PPDATTFNTVITSLCQKGLLLQAIETL 535
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+M PN YN +++ K G+ +EA K ++ M N P+ +TYN +I +
Sbjct: 536 KIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKA 593
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+++EA L+ M NG + T++S+ G+C D+A+ L + + ++PD Y
Sbjct: 594 GKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFY 653
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
++ GFC+ ++D AI M + G P ++ + L LD A LL
Sbjct: 654 NDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLL 708
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 103/204 (50%), Gaps = 2/204 (0%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+++ L + + A E +I+ EN P+ STY ++ K G + A K+
Sbjct: 514 TFNTVITSLCQKGLLLQAIETL-KIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSG 572
Query: 220 MT-VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
MT P+L+ YNT+I+ K G++EEA + M++ G P+ +TY ++ YG+C D
Sbjct: 573 MTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTD 632
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
A ++ +++ G + + + +L G C + D A+ +++ + PD +Y +++
Sbjct: 633 RAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILL 692
Query: 339 NGFCKIGKSDEAISLLKEMRARGL 362
DEA LL + + G+
Sbjct: 693 EALAYECLLDEAKQLLVNLCSLGV 716
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN+++ + + ++ A + +V N + PD TY ++ G C+ + A ++
Sbjct: 580 LITYNTVISNITKAGKMEEALDLLRVMVS-NGLSPDTITYRSLAYGICREDGTDRAIRML 638
Query: 218 ---DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + P+ YN ++ GFC+ + A C M++ GC P+E TY ++ L
Sbjct: 639 CRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYE 698
Query: 275 GRVDEAKMLMAKMRLNGFKD 294
+DEAK L+ + G D
Sbjct: 699 CLLDEAKQLLVNLCSLGVLD 718
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 196/384 (51%), Gaps = 27/384 (7%)
Query: 95 YTAITDVLLSHSLISIAASLLK---------------------NSNKLSDFFI-SKLIKA 132
Y + L +H ++S A SL++ + SD ++ S LI A
Sbjct: 4 YCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAVILETKGTQRSDIYVFSGLITA 63
Query: 133 YGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPP 192
Y + G ++ AI + ++ + + +L L+++ KL F+ +I+ E+ P
Sbjct: 64 YLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL-ESGYPA 122
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
+ + ++ +CK I A+ VFD +T ++P++++YNT++NG+ + G+L+E +
Sbjct: 123 SLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 182
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+ M G +P+ TY+ +I GLC ++D+A L +M + G N T +++ G C
Sbjct: 183 SAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 242
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G+ D A+ + ++ ++ PD+ +Y +I G CK G +A L+ EM +GLKP ++
Sbjct: 243 GRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITY 302
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
A+ + G+LD A K+M Q + + V+Y +I GLC +GR D E ++ M+
Sbjct: 303 TALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQ-EGRSVDAEKMLREML 361
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNV 453
G D Y+ ++ +C++G+V
Sbjct: 362 SVGLKPDARTYTMIINEFCKKGDV 385
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 153/282 (54%), Gaps = 6/282 (2%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+L++ S +F + L+ + +++ A F + + SYN+L+ +R+
Sbjct: 115 ILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 174
Query: 174 IKLAEEF-FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAY 229
L E F + + V PDV TY+ +I G CK +++A ++FD M VK PN + +
Sbjct: 175 --LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 232
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
T+I+G CK G ++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M +
Sbjct: 233 TTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 292
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G K + T+ +++ G C G D A + + +++ N+ D +Y +I+G C+ G+S +
Sbjct: 293 KGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 352
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
A +L+EM + GLKP ++ + + G++ + LLK+
Sbjct: 353 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 130/333 (39%), Gaps = 89/333 (26%)
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGC------------------RPNELTYNAM 267
L +Y TMI+ C L EAK + +++R R + ++ +
Sbjct: 1 LHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAVILETKGTQRSDIYVFSGL 60
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-- 325
I +G + +A R + F T + +L+ L + F G+ + ++E+
Sbjct: 61 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILESGY 120
Query: 326 ---------------------------------NMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ P V SY ++NG+ ++G DE
Sbjct: 121 PASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180
Query: 353 LLKEMRARGLKPTVFSFNAV-------------------------------FRILVE--- 378
L M A G++P V++++ + F L++
Sbjct: 181 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 240
Query: 379 -NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
NG +D A+ + KQM LP+ ++YNT+I GLC KG ++ DL+D M G D
Sbjct: 241 KNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLC-KKGDLKQAHDLIDEMSMKGLKPDK 299
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
Y+ L+ G C+EG+++ + M+ + RL
Sbjct: 300 ITYTALIDGCCKEGDLDTAFEHRKRMIQENIRL 332
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 187/378 (49%), Gaps = 20/378 (5%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFH-----Q 148
C+ + + S SL+ L N ++ + L+K +G VK + FH Q
Sbjct: 54 CFCHLGQMAFSFSLLGKILKLGYXPNTIT---WTTLMKGLCLKGEVKK-LLHFHDKVVAQ 109
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
A Q SY +LL L + + A + +++++ P+V Y+ +I G CK
Sbjct: 110 AFQTNQ----VSYGTLLNGLCKTGETRCAIKLL-RMIEDRSTRPNVVMYSAIIDGLCKDK 164
Query: 209 MIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
++ A ++ M + PN++ YNT+I FC G+L A ++EM+ + P+ T++
Sbjct: 165 LVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFS 224
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+I LC G+ AK + M G NV ++ M+ GLC + D+A+ LR ++
Sbjct: 225 ILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHK 282
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
NM PD +Y +I+G CK G+ A++L+ EM RG V ++ ++ L +N LD+A
Sbjct: 283 NMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKA 342
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L +M + P +Y +I GLC GR+++ ++L ++ G +D Y+ ++
Sbjct: 343 TALFMKMKERGIQPTMYTYTALIDGLCKG-GRLKNAQELFQHLLVKGCCIDVWTYTVMIS 401
Query: 446 GYCEEGNVENVMQIAHEM 463
G C+EG + + I +M
Sbjct: 402 GLCKEGMFDEALAIKSKM 419
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 7/276 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + A H+++ +N+ PDV T++ +I CK G +NAK++F
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNI-NPDVYTFSILIDALCKEG--KNAKQIFHA 243
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V PN+ +YN MING CK ++EA + EM+++ P+ +TYN++I GLC +GR
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ A LM +M G +V T+ S+L LC D+A + E + P + +Y
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 363
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G CK G+ A L + + +G V+++ + L + G D A+ + +M
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
C+PN V++ II L K E L+ MI G
Sbjct: 424 CIPNAVTFEIIIRSL-FEKDENDKAEKLLHEMIAKG 458
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 34/282 (12%)
Query: 215 KVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
K DV ++ NL+ + +IN FC G++ + + +++ G PN +T+ ++ GLC+
Sbjct: 34 KQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLK 93
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G V + K+ F+ N ++ ++L GLC G+ A+ LR + + + P+V Y
Sbjct: 94 GEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMY 153
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ--- 391
+I+G CK +EA L EM AR + P V ++N + G+L A LL +
Sbjct: 154 SAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMIL 213
Query: 392 ------------------------------MPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
M QM PN SYN +I GLC K R+ +
Sbjct: 214 KNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCK-RVDEA 272
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+L+ M+ D Y+ L+ G C+ G + + + + +EM
Sbjct: 273 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM 314
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 7/252 (2%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+LKN N + S LI A G K A FH Q+ +YSYN ++ L +
Sbjct: 212 ILKNINP-DVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 268
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYN 230
+ A +++ +N+VP D TY ++I G CK G I +A + + M + +++ Y
Sbjct: 269 VDEAMNLLREMLHKNMVP-DTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 327
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
++++ CK L++A +M RG +P TY A+I GLC GR+ A+ L + +
Sbjct: 328 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 387
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G +V T+ M+ GLC G FD+A+ + + P+ ++E++I + ++D+A
Sbjct: 388 GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKA 447
Query: 351 ISLLKEMRARGL 362
LL EM A+GL
Sbjct: 448 EKLLHEMIAKGL 459
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M + G + N+ T ++ C +G+ + L +++ P+ ++ ++ G C
Sbjct: 32 LSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLC 91
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
G+ + + ++ A+ + S+ + L + GE AI LL+ + PN V
Sbjct: 92 LKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVV 151
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
Y+ II GLC K + + DL M + Y+ L+ +C G + + HE
Sbjct: 152 MYSAIIDGLCKDK-LVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHE 210
Query: 463 MVTK 466
M+ K
Sbjct: 211 MILK 214
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
ISL K+M +G++ + + + + G++ + LL ++ ++ PN +++ T++ G
Sbjct: 30 ISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKG 89
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
LC+ KG ++ + D+++ + Y LL G C+ G +++
Sbjct: 90 LCL-KGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKL 137
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 214/430 (49%), Gaps = 29/430 (6%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSNTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
+G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL--------- 398
D A +LK M + + + + G+ D+A+ LL ++ + D +
Sbjct: 308 DAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHL 367
Query: 399 -PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 368 EPN--AYNPMIEYLC-NNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAF 423
Query: 458 QIAHEMVTKK 467
++ M+ +K
Sbjct: 424 ELLKIMLRRK 433
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 152/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL N+ + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSNTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN++ + M+
Sbjct: 301 HCKSGNLDAAADVLKAMI 318
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQASKAETLVRQLMKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 205/407 (50%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + +L +H ++S A SL++ +
Sbjct: 3 SPTNSTFRHTLDSYCTMIHLLCTHQMLSEAKSLIRVVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + ++ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ + P + + ++ +CK G I A+ VF+ +T ++P+++++NT++NG+
Sbjct: 123 FYEEIL-DCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ G+L+E + + M G +P+ TY+ +I GLC ++D+A L +M G N
Sbjct: 182 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C + D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M Q + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 361 RYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 407
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 151/284 (53%), Gaps = 6/284 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F+ + + S+N+L+ +R+ L E F
Sbjct: 137 YFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGD--LDEGFRLK 194
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK +++A +FD M K PN + + T+I G CK
Sbjct: 195 SAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKN 254
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M + G K + T+
Sbjct: 255 RRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITY 314
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G + A + + +++ N+ D +Y +I+G C+ G+ +A +L+EM +
Sbjct: 315 TTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLS 374
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GLKP ++ + + G++ LLK+M + +P+ VS
Sbjct: 375 VGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 179/347 (51%), Gaps = 44/347 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM------------------- 200
++N+L+ L R + ++ A ++ V P D +T+TT+
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAP-DETTFTTLMQGFVEEGSIEAALRVKAR 241
Query: 201 ----------------IRGYCKMGMIENA-----KKVFDVMTVKPNLLAYNTMINGFCKK 239
I GYCK+G +E+A +++ D +P+ + YNT +NG C+
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD--GFEPDQITYNTFVNGLCQN 299
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+ A K M+ M+ G P+ TYN ++ LC NG+++EAK ++ +M G +++T
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ LC + ++A+ R V ++PDV ++ ++IN CK+G A+ L +EM+
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G P ++N + L G+L +A+ LLK M C + ++YNTII GLC K R++
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC-KKMRIE 478
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E++ D+M G + + ++ L+ G C++ +++ + ++M+++
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISE 525
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 156/292 (53%), Gaps = 4/292 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N L+ L +V LA F ++ K + PD TY T+I C +G + A +
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 449
Query: 218 DVM--TVKP-NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M T P + + YNT+I+G CKK +EEA++ ++M +G N +T+N +I GLC +
Sbjct: 450 KDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 509
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
++D+A L+ +M G + N T+ S+L C G +A L + DV +Y
Sbjct: 510 KKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTY 569
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ING CK G++ A+ +L+ MR +G++PT ++N V + L + A+ L ++M +
Sbjct: 570 GTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+ P+ ++Y + GLC G +++ D + M+ G +F+ + L +G
Sbjct: 630 VGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 132/277 (47%), Gaps = 36/277 (12%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ + + YN ++N + +++ + +EM RG +P+ +T+N ++ LC +V A
Sbjct: 142 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+++ +M G + +T ++++G G + A+ ++E + + V+ING+
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261
Query: 342 CKIGKSDEAISLLKEMRARGLK-----------------------------------PTV 366
CK+G+ ++A+ +++ A G + P V
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
F++N V L +NG+L+ A +L QM CLP+ ++NT+I LC R+++ DL
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN-RLEEALDLAR 380
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ G + D ++ L+ C+ G+ +++ EM
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 140/341 (41%), Gaps = 53/341 (15%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
NI+ + + +P+ AL F N P++ Y + D L S + A LL
Sbjct: 395 NILINALCKVGDPHLALRLFEEMKNSGCTPDEV-----TYNTLIDNLCSLGKLGKALDLL 449
Query: 116 KNSNKL----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
K+ S + +I + ++ A F Q ++N+L+ L +
Sbjct: 450 KDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 509
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLA 228
I A +Q++ E + P ++ TY +++ YCK G I+ A + + MT + +++
Sbjct: 510 KKIDDAFGLINQMISEGLQPNNI-TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRP----------------------------- 259
Y T+ING CK G + A K + M +G RP
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Query: 260 ------NELTYNAMIYGLCINGR-VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ LTY + GLC G + EA M +M GF S+ + + +GL +G
Sbjct: 629 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMD 688
Query: 313 DQAVGYLRNVMEANMNPDVKSYEV-VINGFCKIGKSDEAIS 352
D + + +ME D++ +V I G+ KI K +A++
Sbjct: 689 DYFIRAIEIIME---KVDLRESDVSAIRGYLKIRKFYDALA 726
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 117/294 (39%), Gaps = 56/294 (19%)
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P Y +I L G +D K+L+A+MR G + + S L FD AV
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131
Query: 319 LRNVMEA-------------------------------------NMNPDVKSYEVVINGF 341
+ N ++ + PDV ++ ++
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C+ + A+ +L+EM +RG+ P +F + + VE G ++ A+ + +M +M C
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
V+ N +I G C GR++D + + I G D Y+ + G C+ +V + +++
Sbjct: 252 VTVNVLINGYCKL-GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310
Query: 462 EMVT------------------KKGRLLKLKNFLTRVVDALLLMWIVTGGSWIS 497
MV K G+L + K L ++VD L I T + I+
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 196/407 (48%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + HT Y + L +H ++ A SL++ +
Sbjct: 3 HPGNXTFRHTLHTYCTMIHFLCTHQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S L+ AY + G V AI F K+ + + +L L+++ KL +
Sbjct: 63 RSDIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWD 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + ++ +CK G + A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYKEIL-ECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ G+L+E + + M G +P+ TY+ +I GLC +VDEA L +M G N
Sbjct: 182 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ C G D A+ + ++ +PD+ +Y +I G CK G + +L+ E
Sbjct: 242 VTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M GLKP ++ + + G+L+ A K+M + + V+Y ++ GLC +G
Sbjct: 302 MSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E + M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 361 RADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEM 407
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 153/284 (53%), Gaps = 6/284 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + ++ + G ++ A F + + S+N+L+ +R+ L E F
Sbjct: 137 YFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGD--LDEGFRLK 194
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK ++ A ++F+ M + PN + + T+I+ CK
Sbjct: 195 SAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKN 254
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++G P+ +TYN +IYGLC G + + + L+ +M +NG K + T+
Sbjct: 255 GMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITY 314
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G + A + + +++ ++ D +Y +++G C+ G++D+A + +EM +
Sbjct: 315 TTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLS 374
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GLKP ++ + + G++ A LLK+M + +P V+
Sbjct: 375 VGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 203/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H +I A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAXJLETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 ISDIYVFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++++A L +M NG N
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 200/431 (46%), Gaps = 47/431 (10%)
Query: 67 NPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN--------- 117
+P+ AL FFN A N Y+AI VL+ L+S A LL +
Sbjct: 42 SPWKALEFFNAAPEKN---------IQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSH 92
Query: 118 -----------------SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL-- 158
S+K + +LI V+ A+ +H+ GA L
Sbjct: 93 KPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHKV-----GAALTI 147
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+ N LL VLV+ +L + +++ N + P V T+ T+I G C+ G + A+++FD
Sbjct: 148 QACNVLLYVLVKTGRFELLWRIYEEMIS-NGLSPSVITFGTLIDGCCRQGDLLRAQEMFD 206
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M VK P ++ Y +I G C ++EEA+ M G PN TYN ++ G C
Sbjct: 207 EMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLA 266
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+A L M G +V T ++ GLC G+ A N+++ ++ P++ Y
Sbjct: 267 NAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYN 326
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+ +CK+G EA++L E+ + P VF+++ + R L + A + ++M +
Sbjct: 327 SLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKE 386
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
L N V+YN++I G C +G+M ++ +M +G + +S L+ GYC+ N++
Sbjct: 387 GILANSVTYNSLIDGCC-KEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQA 445
Query: 456 VMQIAHEMVTK 466
M I EMV K
Sbjct: 446 AMGIYSEMVIK 456
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 169/327 (51%), Gaps = 7/327 (2%)
Query: 143 IFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
+ W + I NG + ++ +L+ R + A+E F ++ + +VP V YT +
Sbjct: 165 LLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPT-VIVYTIL 223
Query: 201 IRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
IRG C IE A+ + M V PN+ YNT+++G+CK ++A + +M+ G
Sbjct: 224 IRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGL 283
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +T+ +I GLC G + A+ L M N++ + S++ C VG +A+
Sbjct: 284 VPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMA 343
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
+ ++PDV +Y ++I G C + +++EA ++ ++M G+ ++N++
Sbjct: 344 LFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCC 403
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G++D+A+ + QM + PN ++++T+I G C + +Q + M+ + D
Sbjct: 404 KEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIR-NLQAAMGIYSEMVIKSLSPDV 462
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMV 464
Y+ ++ G+C+ G+++ +++ +M+
Sbjct: 463 VTYTAMIDGHCKYGSMKEALKLYSDML 489
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 158/322 (49%), Gaps = 18/322 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+YN+L+ ++ + K A + ++ E +VP DV T+ +I G CK G ++ A+ +F
Sbjct: 252 VYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVP-DVVTFGILIDGLCKFGEMKAARNLF 310
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M +V PN+ YN++I+ +CK G++ EA E+ P+ TY+ +I GLC
Sbjct: 311 VNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSV 370
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R +EA + KM G N T+ S++ G C GK D+A+ + E + P+V ++
Sbjct: 371 SRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITF 430
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G+CKI A+ + EM + L P V ++ A+ + G + A+ L M
Sbjct: 431 STLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLD 490
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR----------SGHNLDFT---MYS 441
PN + + ++ GLC G++ D +L I G T Y+
Sbjct: 491 NGITPNCYTISCLLDGLC-KDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYT 549
Query: 442 CLLKGYCEEGNVENVMQIAHEM 463
L+ G C++G +++ +M
Sbjct: 550 ALIHGLCQDGQFSKAVKLFSDM 571
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 153/311 (49%), Gaps = 20/311 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY G+V A+ F + ++ E +++Y+ L+ L V+ + A F ++ KE
Sbjct: 328 LIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEG 387
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
++ V TY ++I G CK G ++ A ++ MT V+PN++ ++T+I+G+CK L+ A
Sbjct: 388 ILANSV-TYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAA 446
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+EM+ + P+ +TY AMI G C G + EA L + M NG N T +L G
Sbjct: 447 MGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDG 506
Query: 306 LCVVGKFDQAVGYLR----------NVMEANMNPDVK---SYEVVINGFCKIGKSDEAIS 352
LC GK A+ NV P + +Y +I+G C+ G+ +A+
Sbjct: 507 LCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVK 566
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
L +MR GL+P + + R L + + ++L M + +PN + + I+C
Sbjct: 567 LFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLHADMLKFGVIPN-SAVHVILCECY 623
Query: 413 MAKGRMQDVED 423
G ++ ++
Sbjct: 624 QESGFLKSAQN 634
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+ I + + +N + + S LI Y N++AA+ + + + +Y +++
Sbjct: 412 LEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDG 471
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---------- 217
+ S+K A + + ++ +N + P+ T + ++ G CK G I +A ++F
Sbjct: 472 HCKYGSMKEALKLYSDML-DNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPR 530
Query: 218 ---DVMTVKPNL---LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
D KP+L +AY +I+G C+ G+ +A K ++M G +P+E+ Y M+ GL
Sbjct: 531 CNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 194/414 (46%), Gaps = 10/414 (2%)
Query: 66 TNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA----ASLLKNSNKL 121
+ P A+ FN A++ P T+ Y + D +A LL+ ++
Sbjct: 89 SGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRV 148
Query: 122 SDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
+ L+K + + A+ H+ ++ ++SY+ LL L A++
Sbjct: 149 DIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 208
Query: 181 FHQIVKENVV-PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
+ + V PDV YTT+I + K G + A +F M + P+L+ Y+++++
Sbjct: 209 LRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHAL 268
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
CK + +A+ + +M+N+G P+ TYN +IYG G+ EA + +MR + +V
Sbjct: 269 CKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 328
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T ++ LC GK +A + NPDV SY++++NG+ G + L
Sbjct: 329 VTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDL 388
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M G+ P +++F+ + + G LD+A+++ +M P+ V+Y T+I LC G
Sbjct: 389 MLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRI-G 447
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+M D + ++MI G D Y CL++G+C G++ ++ E++ RL
Sbjct: 448 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRL 501
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 171/342 (50%), Gaps = 5/342 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I + G+V A F + Q L +Y+S++ L + ++ AE F Q+V
Sbjct: 227 TTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVN 286
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ V+P D TY +I GY G + A +VF M ++ P+++ N ++ CK G+++
Sbjct: 287 KGVLP-DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIK 345
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ + M +G P+ +Y M+ G G + + L M +G ++ T ++
Sbjct: 346 EARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLI 405
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
K G D+A+ + + + PDV +Y VI C+IGK D+A+ +M +G+
Sbjct: 406 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVA 465
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P ++++ + + +G L +A L+ ++ + V +++II LC GR+ D ++
Sbjct: 466 PDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLC-KLGRIMDAQN 524
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ D + G + D +YS L+ GYC G +E +++ MV+
Sbjct: 525 IFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 566
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 185/394 (46%), Gaps = 42/394 (10%)
Query: 95 YTAITDVLLSHSLISIAASLLK---NSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+++ L + A + L+ N L D + + LI Y G K A+ F + +
Sbjct: 261 YSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 320
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP------------------- 191
+ + + N L+G L + IK A + F + + P
Sbjct: 321 RHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLV 380
Query: 192 ---------------PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
PD+ T++ +I+ Y GM++ A +F+ M VKP+++ Y T+I
Sbjct: 381 DMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVI 440
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
C+ G++++A + N+M+++G P++ Y+ +I G C +G + +AK L+ ++ NG +
Sbjct: 441 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMR 500
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
++ S++ LC +G+ A + +PD Y ++++G+C +GK ++A+ +
Sbjct: 501 LDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRV 560
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
M + G++P V + + + G +D + L ++M Q P+ + YN II GL +
Sbjct: 561 FDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFV 620
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
A GR + M SG ++ Y+ +L+G+
Sbjct: 621 A-GRTVPAKVKFHEMTESGIAINKCTYNIVLRGF 653
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 166/312 (53%), Gaps = 5/312 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ S LIKAY + G + A+ F++ + + +Y +++ L R+ + A E F+Q
Sbjct: 399 YTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQ 458
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKK-VFDVMT--VKPNLLAYNTMINGFCKKG 240
++ + V P D Y +I+G+C G + AK+ + ++M ++ +++ ++++IN CK G
Sbjct: 459 MIDQGVAP-DKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLG 517
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ +A+ + +N G P+ + Y+ ++ G C+ G++++A + M G + NV +
Sbjct: 518 RIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYG 577
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G C +G+ D+ + R +++ + P Y ++I+G G++ A EM
Sbjct: 578 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTES 637
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+ ++N V R +N D AI L K++ M+ + ++ NT+I G+ + R+++
Sbjct: 638 GIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR-RVEE 696
Query: 421 VEDLVDRMIRSG 432
+DL + RSG
Sbjct: 697 AKDLFASISRSG 708
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 167/343 (48%), Gaps = 9/343 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A G K + K+++ + ++ L+ L + + A E F ++
Sbjct: 311 LLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGE 370
Query: 189 ----VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMINGFCKKG 240
+V PDV TY T+I G CK+G E + + M + PN + YN +I+G+CK
Sbjct: 371 SNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKAS 430
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+E A++ ++M G PN +T N ++ G+C +GR++ A +M+ G K N T+
Sbjct: 431 MIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYT 490
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++++ C V ++A+ ++EA +PD Y +I+G + GK D A +L +M+
Sbjct: 491 ALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA 550
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G P + SFN + +LD A +LK+M P+ V+YNT+I G
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFS-KTGDFST 609
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L+ +M++ G Y L+ YC GN++ M+I +M
Sbjct: 610 AHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM 652
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 158/310 (50%), Gaps = 3/310 (0%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ L +V + ++ + P+ TY +I GYCK MIE A+++FD
Sbjct: 382 TYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQ 441
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V PN++ NT+++G CK G + A + NEM +G + N +TY A+I C
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+++A L +M G + + +++ GL GK D+A L + EA +PD+ S+ V
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+INGFC+ K DEA +LKEM G+KP ++N + + G+ A L+K+M +
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+P V+Y +I C+ + ++ D S + +Y+ L+ C + V+
Sbjct: 622 LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLA 681
Query: 457 MQIAHEMVTK 466
+ + +M K
Sbjct: 682 LSLMDDMKVK 691
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 166/340 (48%), Gaps = 24/340 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ + + I+ A E F Q+ K+ V PP+V T T++ G CK G I A + F+
Sbjct: 418 TYNCLIDGYCKASMIEAARELFDQMNKDGV-PPNVVTLNTLVDGMCKHGRINGAVEFFNE 476
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +K N + Y +I FC +E+A + +EM+ GC P+ + Y +I GL G+
Sbjct: 477 MQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGK 536
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A +++KM+ GF ++ + ++ G C K D+A L+ + A + PD +Y
Sbjct: 537 LDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNT 596
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ F K G A L+K+M GL PTV ++ A+ NG LD A+ + + M
Sbjct: 597 LISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTS 656
Query: 397 CL-PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ PN V YN +I LC K ++ L+D M G + ++ + KG E+ +
Sbjct: 657 KVPPNTVIYNILINSLC-RKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSK 715
Query: 456 V------------------MQIAHEMVTKKGRLLKLKNFL 477
M+I E ++ G KLK+F+
Sbjct: 716 AFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFV 755
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 7/232 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G + A F + K+ + S+N L+ R N + A E ++ EN
Sbjct: 527 LISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEM--EN 584
Query: 189 V-VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEE 244
+ PD TY T+I + K G A ++ M + P ++ Y +I+ +C G L+E
Sbjct: 585 AGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDE 644
Query: 245 AKKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A K +M + PN + YN +I LC +VD A LM M++ G K N +T +M
Sbjct: 645 AMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMF 704
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
KGL +A + + E NPD + E++ +G++ + S ++
Sbjct: 705 KGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQ 756
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 182/419 (43%), Gaps = 64/419 (15%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNS-NKLSDFFISKL 129
AL FFNW +P + +P + + + H AS NS NKL D F K
Sbjct: 103 ALKFFNWVQANSPCQD-----SPLLSFTLEAVFEH------ASREPNSHNKLLDLF--KT 149
Query: 130 IKAYGDRGNVKAA---IFWFHQAKQIENGACLYS-----------YNSLLGVLVRVNSIK 175
K++ +V AA I F +A+ ++ +Y+ N L+ VL R +
Sbjct: 150 SKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLTHIRNILIDVLFRKGRVD 209
Query: 176 LAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMIN 234
A ++++ PP+ +T G+ + KV
Sbjct: 210 DALHLLDEMLQPKAEFPPNSNT------GHIVFSALSKRDKV------------------ 245
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA-KMLMAKMRLNGFK 293
+ + EE +++ PN + +I LC +GR D A +L M+L G
Sbjct: 246 --GRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVM 303
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ S + ++L L +F + L + E ++ P+V ++ ++IN CK + DEA+ +
Sbjct: 304 EAASCN-ALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEV 362
Query: 354 LKEM---RARG--LKPTVFSFNAVFRILVENGELDRAILLLKQM-PQMDCLPNFVSYNTI 407
++M + G ++P V ++N + L + G + + L+++M Q C+PN V+YN +
Sbjct: 363 FEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCL 422
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
I G C A ++ +L D+M + G + + L+ G C+ G + ++ +EM K
Sbjct: 423 IDGYCKA-SMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGK 480
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 213/483 (44%), Gaps = 83/483 (17%)
Query: 58 VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN 117
V V+ Q NP AL FN + + HT Y + + L H +L
Sbjct: 10 VAAVVKYQKNPLKALEIFNSVKKED----GFKHTLLTYKGMIEKLGFHGEFEAMEEVLAE 65
Query: 118 S-----NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+ N L + ++ YG +G ++ A+ F + + SYN+++ +LV
Sbjct: 66 TRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYR 125
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--------- 223
A + + ++ + +V PDV T+T ++ +C+ A+++ + M +
Sbjct: 126 YFDQAHKVYMRMRDKGIV-PDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAY 184
Query: 224 -----------------------------PNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
P+++A+N +I+ C+KG ++E+++ +N+++
Sbjct: 185 CTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLK 244
Query: 255 RGCRPN----------------------------------ELTYNAMIYGLCINGRVDEA 280
RG PN +TYN +I GLC N +V EA
Sbjct: 245 RGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEA 304
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+ + KM G++ + T+ S++ G C +G A LR+ PD +Y +ING
Sbjct: 305 EHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLING 364
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
C+ G D AI++ E +GLKP + N + + L + G + +A+ L+ +M + C P+
Sbjct: 365 LCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPD 424
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+YN +I GLC G + D ++LV I GH D ++ L+ GYC++ ++N ++I
Sbjct: 425 IWTYNLVINGLCKI-GCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIV 483
Query: 461 HEM 463
M
Sbjct: 484 DRM 486
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 173/351 (49%), Gaps = 41/351 (11%)
Query: 155 GAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIEN 212
G C + ++N L+ L R ++ +E ++++K V P++ T I+G+C+ M+
Sbjct: 211 GICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGV-SPNLFTVNIFIQGFCQRAMLNE 269
Query: 213 AKKVFDVMT--VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
A ++ D + + P+++ YNT+I G CK ++ EA+ + +M+N G P+ TYN++I G
Sbjct: 270 AIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDG 329
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM--- 327
C G + A ++ GF + ST+ S++ GLC G D+A+ ME +
Sbjct: 330 YCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPN 389
Query: 328 --------------------------------NPDVKSYEVVINGFCKIGKSDEAISLLK 355
+PD+ +Y +VING CKIG +A +L+
Sbjct: 390 LVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVI 449
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+ A+G P VF+FN + + +LD AI ++ +M P+ ++YN+I+ GLC A
Sbjct: 450 DAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKA- 508
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G+ +DV M+ G + Y+ L + +C+ VE + + EM K
Sbjct: 509 GKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNK 559
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 161/297 (54%), Gaps = 4/297 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y SL+ L + I A F++ + E + P++ T+++G + G+I A K+ +
Sbjct: 357 TYCSLINGLCQDGDIDRAINVFNEAM-EKGLKPNLVLCNTLVKGLSQQGLILQALKLMNE 415
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ P++ YN +ING CK G + +A + + + +G P+ T+N +I G C +
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLK 475
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A ++ +M +G +V T+ S+L GLC GK++ +G + +ME P++ +Y +
Sbjct: 476 LDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNI 535
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ FCK K +EA++L++EM+ +GL P V +F + + +NG+LD A L K++ +
Sbjct: 536 LTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQY 595
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ ++ I+ K M E L ++M +G + D Y ++ G+C+ GN+
Sbjct: 596 KFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNI 652
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 162/359 (45%), Gaps = 50/359 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L+K +G + A+ ++ ENG +++YN ++ L ++ + A+ +
Sbjct: 396 LVKGLSQQGLILQALKLMNEMS--ENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIA 453
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ +P DV T+ T+I GYCK ++NA ++ D M V P+++ YN+++NG CK G+ E
Sbjct: 454 KGHLP-DVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYE 512
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+ MM +GC PN +TYN + C +V+EA L+ +M+ G +V +++
Sbjct: 513 DVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLM 572
Query: 304 KGLCVVGKFDQAVGYLRNVMEA---------------------NMN-------------- 328
KG C G D A + V E NMN
Sbjct: 573 KGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGF 632
Query: 329 -PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD +Y V+I+GFCK G + S L +GL P++ +F V L + A+
Sbjct: 633 SPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVG 692
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
++ M +P V NTI K + + +V+ +++ GH + + Y L G
Sbjct: 693 IIHLMVHKGIVPEVV--NTIFEA---DKKEVAAPKIVVENLMKKGH-ITYFAYEILHDG 745
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 142/329 (43%), Gaps = 41/329 (12%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF--DVMTVKPNLL--AYNTM 232
A E F+ + KE+ + TY MI G E ++V M + LL Y
Sbjct: 23 ALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGA 82
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+ + +KG+++EA M C P+ +YNA++ L D+A + +MR G
Sbjct: 83 MRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGI 142
Query: 293 KDNVSTHKSMLKGLC-----------------------------VVGKFD------QAVG 317
+V T +K C V+G F +A
Sbjct: 143 VPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHE 202
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
++ + PD+ ++ +I+ C+ G E+ LL ++ RG+ P +F+ N +
Sbjct: 203 LFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFC 262
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ L+ AI LL + + P+ ++YNT+ICGLC ++ + E + +M+ G+ D
Sbjct: 263 QRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLC-KNFKVVEAEHYLRKMVNEGYEPDG 320
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ ++ GYC+ G ++N QI + K
Sbjct: 321 FTYNSIIDGYCKLGMMQNADQILRDGAFK 349
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 168/307 (54%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++G L + LA + +Q++ +N P V TYT +I G ++ A K+ D
Sbjct: 195 TYNIMIGSLCSRGKLDLALKVLNQLLSDNC-QPTVITYTILIEATMLEGGVDEALKLMDE 253
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KP++ YNT+I G CK+G ++ A + + + +GC P+ ++YN ++ L G+
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+E + LM KM NV T+ ++ LC GK ++A+ L+ + E + PD SY+
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I FC+ G+ D AI L+ M + G P + ++N V L +NG+ D+A+ + ++ ++
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C PN SYNT+ L + +++ + ++ M+ +G + D Y+ ++ C EG V+
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALH-MILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Query: 457 MQIAHEM 463
++ +M
Sbjct: 493 FELLVDM 499
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 148/278 (53%), Gaps = 4/278 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+ E PDV Y +I G+CKM I++A +V D M K P+ + YN MI C +G+
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L+ A K +N++++ C+P +TY +I + G VDEA LM +M G K ++ T+ +
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+++G+C G D+A +RN+ PDV SY +++ GK +E L+ +M +
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P V +++ + L +G+++ A+ LLK M + P+ SY+ +I C +GR+
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC-REGRLDVA 387
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ ++ MI G D Y+ +L C+ G + ++I
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 150/276 (54%), Gaps = 3/276 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTV--KPNLLAYNTMINGFCKKGELEEAKKCM 249
PDV T +I+G+ + I A +V +++ +P++ AYN +INGFCK +++A + +
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVL 181
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+ M ++ P+ +TYN MI LC G++D A ++ ++ + + V T+ +++ +
Sbjct: 182 DRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLE 241
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G D+A+ + ++ + PD+ +Y +I G CK G D A +++ + +G +P V S+
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + R L+ G+ + L+ +M C PN V+Y+ +I LC G++++ +L+ M
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC-RDGKIEEAMNLLKLMK 360
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
G D Y L+ +C EG ++ ++ M++
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 156/313 (49%), Gaps = 11/313 (3%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + +I+ G V A F + +E C + SYN LL L+ + E+
Sbjct: 264 FTYNTIIRGMCKEGMVDRA---FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 320
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFC 237
++ E P+V TY+ +I C+ G IE A + +M K P+ +Y+ +I FC
Sbjct: 321 MTKMFSEKC-DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
++G L+ A + + M++ GC P+ + YN ++ LC NG+ D+A + K+ G N S
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
++ +M L G +A+ + +M ++PD +Y +I+ C+ G DEA LL +M
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
R+ P+V ++N V + ++ AI +L+ M C PN +Y +I G+ A R
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559
Query: 418 MQDVEDLVDRMIR 430
+ +E L + ++R
Sbjct: 560 AEAME-LANDLVR 571
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 52/243 (21%)
Query: 291 GFKDNVSTHKSMLKGL---CVVGKFDQAVGYLRNVMEANMNPDVK--------------- 332
GF+D MLK C G + +++ L ++ NPDV
Sbjct: 86 GFRDT-----QMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNI 140
Query: 333 -------------------SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+Y +INGFCK+ + D+A +L MR++ P ++N +
Sbjct: 141 PKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI 200
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L G+LD A+ +L Q+ +C P ++Y TI+ M +G + + L+D M+ G
Sbjct: 201 GSLCSRGKLDLALKVLNQLLSDNCQPTVITY-TILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDA-LLLMWIVTG 492
D Y+ +++G C+EG V+ A EMV R L+LK V+ +LL ++
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDR----AFEMV----RNLELKGCEPDVISYNILLRALLNQ 311
Query: 493 GSW 495
G W
Sbjct: 312 GKW 314
>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 484
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 220/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A+ +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAVDVLKAM----IRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 152/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN++ + + M+
Sbjct: 301 HCKSGNLDAAVDVLKAMI 318
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQASKAETLVRQLMKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 156/276 (56%), Gaps = 7/276 (2%)
Query: 182 HQIVK---ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMING 235
H +V ++ V PDV TYT +I G+C ++ A KVFD+M K PN+ +YNT+ING
Sbjct: 304 HDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLING 363
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
+CK +++A EM + PN +TYN +I+GLC GR+ +A L +M G +
Sbjct: 364 YCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPD 423
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
+ T++ +L LC D+A+ L+ + +N++PD++ Y +VI+G C+ G+ ++A L
Sbjct: 424 LVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFS 483
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+ ++GLKP V+++N + L + G LD A L +M + C + +YNTI G
Sbjct: 484 NLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNN 543
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ ++ L++ M+ G + D + + L+ ++G
Sbjct: 544 ETSRAIQ-LLEEMLARGFSCDVSTTTLLVGMLSDDG 578
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 153/310 (49%), Gaps = 5/310 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ N L+ +N + A +I+K PD +++TT+I+G C G I A +F
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGC-QPDTASFTTLIKGLCLEGQIGEALHLF 167
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +P+++ Y T+ING CK G A + + M C+P+ + Y +I+ LC +
Sbjct: 168 DKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKD 227
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+ +A L ++M G N+ T S++ LC +G++ L ++++ + P+ S
Sbjct: 228 RQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISL 287
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V++ CK G +A ++ M G++P V ++ A+ E+D A+ + M
Sbjct: 288 TTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVH 347
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C PN SYNT+I G C + RM L + M R + Y+ L+ G C G ++
Sbjct: 348 KGCAPNVFSYNTLINGYCKIE-RMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQ 406
Query: 455 NVMQIAHEMV 464
+ + + EMV
Sbjct: 407 DAIALFREMV 416
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 168/343 (48%), Gaps = 11/343 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ LI G+ AAI + +E G C + Y +L+ L + A F +
Sbjct: 183 ATLINGLCKTGHTSAAIRLL---RSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSE 239
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
++ + + P++ T +++ C +G ++ + + M + PN ++ T+++ CK+G
Sbjct: 240 MITKGI-SPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEG 298
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ +A ++ M G P+ +TY A+I G C+ +DEA + M G NV ++
Sbjct: 299 MVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYN 358
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G C + + D+A+ + + P+ +Y +I+G C +G+ +AI+L +EM A
Sbjct: 359 TLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVAC 418
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G P + ++ + L +N LD+A+ LLK + + P+ Y +I G+C A G ++D
Sbjct: 419 GQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRA-GELED 477
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
DL + G + Y+ + G C+ G ++ ++ EM
Sbjct: 478 ARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEM 520
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 138/279 (49%), Gaps = 4/279 (1%)
Query: 191 PPDVSTYTTMIRGYCKM---GMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK 247
PP + + ++ K+ + + + D + N+ N +IN FC + A
Sbjct: 71 PPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFS 130
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ +++ GC+P+ ++ +I GLC+ G++ EA L KM GF+ +V + +++ GLC
Sbjct: 131 VLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLC 190
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G A+ LR++ + N PDV Y +I+ CK + +A +L EM +G+ P +
Sbjct: 191 KTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIV 250
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+ N++ L GE LL +M +PN +S T++ LC +G + D+VD
Sbjct: 251 TCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALC-KEGMVAQAHDVVDM 309
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M +SG D Y+ L+ G+C ++ +++ MV K
Sbjct: 310 MFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK 348
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 75/297 (25%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI + R + A+ F ++SYN+L+ ++ + A F ++ +
Sbjct: 323 TALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCR 382
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVF----------DVMTVK------------- 223
+ ++P V TY T+I G C +G +++A +F D++T +
Sbjct: 383 QKLIPNTV-TYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLD 441
Query: 224 ---------------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
P++ Y +I+G C+ GELE+A+ + + ++G +PN TYN M
Sbjct: 442 KAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMT 501
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
+GLC G +DEA L +M N +
Sbjct: 502 HGLCKRGLLDEATKLFMEMDENA-----------------------------------CS 526
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
D +Y + GF + ++ AI LL+EM ARG V + + +L ++G LD++
Sbjct: 527 ADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDG-LDQS 582
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 3/258 (1%)
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
L +N + + L++A N M++ P+ + + ++ + R L K
Sbjct: 40 LLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRK 99
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M G NV T ++ C + + + A L +++ PD S+ +I G C G+
Sbjct: 100 MDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQ 159
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
EA+ L +M G +P V + + L + G AI LL+ M + +C P+ V Y T
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+I LC + + Q +L MI G + + + L+ C G ++V + +EMV
Sbjct: 220 LIHSLCKDRQQTQAF-NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278
Query: 467 KGRLLKLKNFLTRVVDAL 484
K ++ LT VVDAL
Sbjct: 279 K--IMPNAISLTTVVDAL 294
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 183/408 (44%), Gaps = 74/408 (18%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++K Y ++G K A++ F + L S NSLL LV+ A + Q+++
Sbjct: 162 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVG 221
Query: 189 VVP----------------------------------PDVSTYTTMIRGYCKMGMIENAK 214
+VP P++ TY ++I GY +G +E AK
Sbjct: 222 IVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAK 281
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR-PNELTYNAMIYG 270
V M+ V N++ Y +I G+CK+ +++EA+K + M P+E Y +I G
Sbjct: 282 GVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDG 341
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C G++D+A L+ +M G K N+ S++ G C G+ +A G + +++ N+ PD
Sbjct: 342 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
SY +++G+C+ G + EA +L +M G++PTV ++N + + L G D A+ +
Sbjct: 402 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 461
Query: 391 QMPQMDCLPNFVSY-----------------------------------NTIICGLCMAK 415
M + P+ V Y NT+I GLC
Sbjct: 462 LMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC-KM 520
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G+M + E++ D+M G + D Y L+ GYC+ NV ++ M
Sbjct: 521 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 177/374 (47%), Gaps = 41/374 (10%)
Query: 129 LIKAYGDRGNVKAA--IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y G+V+AA + F K + + +Y L+ + + AE+ + +
Sbjct: 267 LINGYVSLGDVEAAKGVLKFMSEKGVSRN--VVTYTLLIKGYCKQCKMDEAEKVLRGMQE 324
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
E + PD Y +I GYC+ G I++A ++ D M +K NL N++ING+CK+GE+
Sbjct: 325 EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIH 384
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ + M++ +P+ +YN ++ G C G EA L KM G + V T+ ++L
Sbjct: 385 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 444
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
KGLC VG FD A+ +M+ + PD Y +++G K+ + A +L K++ ARG
Sbjct: 445 KGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 504
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA--------- 414
+ +FN + L + G++ A + +M + C P+ ++Y T+I G C A
Sbjct: 505 KSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV 564
Query: 415 KGRMQ-------------------------DVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
KG M+ + DL+ M G + Y L+ G+C+
Sbjct: 565 KGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCK 624
Query: 450 EGNVENVMQIAHEM 463
EG ++ EM
Sbjct: 625 EGMLDKAFSSYFEM 638
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 172/394 (43%), Gaps = 79/394 (20%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+++ L ++ + AEE F ++ K+ PD TY T+I GYCK + A KV
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKM-KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA 567
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING- 275
M + P++ YN++I+G K L E + EM RG PN +TY A+I G C G
Sbjct: 568 MEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 627
Query: 276 ----------------------------------RVDEAKMLMAKMRLNGFKDNVSTHKS 301
R+DEA +LM KM +GF H+
Sbjct: 628 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF---FPDHEC 684
Query: 302 MLK-----------------------------------GLCVVGKFDQAVGYLRNVMEAN 326
LK GLC GK D A + +
Sbjct: 685 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
PD +Y +I+G+ G DEA L EM RGL P + ++NA+ L ++ +DRA
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L ++ Q PN V+YNT+I G C G M L D+MI G + YS L+ G
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKI-GNMDAAFKLKDKMIEEGISPSVVTYSALING 863
Query: 447 YCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRV 480
C+ G++E M++ ++M+ K G KL + T V
Sbjct: 864 LCKHGDIERSMKLLNQMI-KAGVDSKLIEYCTLV 896
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 166/373 (44%), Gaps = 37/373 (9%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G+ A + Q + +YN+LL L RV + A + +H ++K
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXG 467
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF-DVMT--VKPNLLAYNTMINGFCKKGELEEA 245
V P +V Y+T++ G KM E A ++ D++ + + +NTMI+G CK G++ EA
Sbjct: 468 VAPDEVG-YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ ++M + GC P+ +TY +I G C V +A + M ++ + S++ G
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISG 586
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L + + L + + P++ +Y +I+G+CK G D+A S EM GL
Sbjct: 587 LFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 646
Query: 366 VFSFNAVFRILVENGELDRAILLLKQM------PQMDC---------------------- 397
+ + + L G +D A LL+++M P +C
Sbjct: 647 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESC 706
Query: 398 ----LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
LPN + YN I GLC G++ D + G D Y L+ GY GNV
Sbjct: 707 KTFLLPNNIVYNIAIAGLC-KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNV 765
Query: 454 ENVMQIAHEMVTK 466
+ ++ EM+ +
Sbjct: 766 DEAFRLRDEMLRR 778
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 144/287 (50%), Gaps = 7/287 (2%)
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKG 240
+ +E P V + +++ Y + G+ +NA VFD M P+L + N+++N K G
Sbjct: 148 VYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNG 205
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
E A +M+ G P+ + M+ C +G+VDEA + KM G + N+ T+
Sbjct: 206 ETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYH 265
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S++ G +G + A G L+ + E ++ +V +Y ++I G+CK K DEA +L+ M+
Sbjct: 266 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 325
Query: 361 -GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
L P ++ + G++D A+ LL +M ++ N N++I G C +G +
Sbjct: 326 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC-KRGEIH 384
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E ++ RM+ D Y+ LL GYC EG+ + +M+ +
Sbjct: 385 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 431
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 155/339 (45%), Gaps = 5/339 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A+ + ++ L+ NSL+ + I AE ++V N
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+ PD +Y T++ GYC+ G A + D M ++P +L YNT++ G C+ G ++A
Sbjct: 398 L-KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + MM G P+E+ Y+ ++ GL + A L + GF + T +M+ G
Sbjct: 457 LQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 516
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +GK +A + + +PD +Y +I+G+CK +A + M + P+
Sbjct: 517 LCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPS 576
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +N++ L ++ L LL +M PN V+Y +I G C +G +
Sbjct: 577 IEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWC-KEGMLDKAFSSY 635
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M +G + + + S ++ G G ++ + +MV
Sbjct: 636 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 137/282 (48%), Gaps = 1/282 (0%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G + A + + + A + ++++ L R+ I A ++V
Sbjct: 618 LIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG 677
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
P + IR Y + I ++ + PN + YN I G CK G++++A++
Sbjct: 678 FFPDHECFLKSDIR-YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 736
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ + +G P+ TY +I+G G VDEA L +M G N+ T+ +++ GLC
Sbjct: 737 FSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 796
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
D+A + + + P+V +Y +I+G+CKIG D A L +M G+ P+V +
Sbjct: 797 SENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVT 856
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
++A+ L ++G+++R++ LL QM + + Y T++ G
Sbjct: 857 YSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN + L + + A FF + + VP D TY T+I GY G ++ A ++ D M
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVP-DNFTYCTLIHGYSAAGNVDEAFRLRDEM 775
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN++ YN +ING CK ++ A++ +++ +G PN +TYN +I G C G +
Sbjct: 776 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 835
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A L KM G +V T+ +++ GLC G ++++ L +++A ++ + Y +
Sbjct: 836 DAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTL 895
Query: 338 INGFCKIGKSDE 349
+ G K +E
Sbjct: 896 VQGGFKTSNYNE 907
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI NV A FH+ Q + +YN+L+ ++ ++ A + ++++E
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P V TY+ +I G CK G IE + K+ + M V L+ Y T++ G K E
Sbjct: 850 -ISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEM 908
Query: 246 KK 247
K
Sbjct: 909 SK 910
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 169/305 (55%), Gaps = 5/305 (1%)
Query: 163 SLLGVLVRVNSIKLAEEF-FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
+LL +VR+ ++L + F+ V ++ PP+ + ++ G+CK+G + +A+ VFD +
Sbjct: 110 NLLRRVVRLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIP 169
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
++P ++++NT+I+G CK G +EE + M + P+ T++A+I GLC GR+D
Sbjct: 170 KRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLD 229
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
E +L +M G N T ++ G C GK D A+ + ++ + PD+ +Y +I
Sbjct: 230 EGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALI 289
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG CK+G EA L+ EM A GL+P +F + + G+++ A+ + ++M +
Sbjct: 290 NGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIE 349
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
+ V++ +I GLC GR+ D E ++ M+ +G D Y+ ++ +C++GNV +
Sbjct: 350 LDDVAFTVLISGLC-RDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFK 408
Query: 459 IAHEM 463
+ EM
Sbjct: 409 LLKEM 413
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 181/338 (53%), Gaps = 9/338 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH- 182
FF + L+ + G V +A F + + + S+N+L+ + ++ EE F
Sbjct: 143 FFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAV---EEGFRL 199
Query: 183 -QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
+++ V PDV T++ +I G CK G ++ +FD M K PN + + +I+G CK
Sbjct: 200 KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCK 259
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G+++ A K M+ +G RP+ +TYNA+I GLC G + EA+ L+ +M +G + + T
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRIT 319
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+++ G C G + A+ R ++E + D ++ V+I+G C+ G+ +A +L++M
Sbjct: 320 FTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDML 379
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+ G KP ++ V + G + LLK+M +P V+YN ++ GLC +G++
Sbjct: 380 SAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLC-KQGQV 438
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
++ + L+D M+ G + Y+ LL+G+ + G+ +V
Sbjct: 439 KNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDV 476
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 128/242 (52%), Gaps = 1/242 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN +N +++GFCK G + A+ +E+ RG RP +++N +I G C G V+E L
Sbjct: 140 PNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRL 199
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M +V T +++ GLC G+ D+ + + P+ ++ V+I+G CK
Sbjct: 200 KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCK 259
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GK D A+ + M A+G++P + ++NA+ L + G+L A L+ +M P+ ++
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRIT 319
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ T+I G C G M+ ++ RM+ G LD ++ L+ G C +G V + ++ +M
Sbjct: 320 FTTLIDGCC-KYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDM 378
Query: 464 VT 465
++
Sbjct: 379 LS 380
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
E+ G P F FN + + G + A L+ ++P+ P VS+NT+I G C A
Sbjct: 132 EVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKA- 190
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G +++ L M D +S L+ G C+EG ++ + EM K
Sbjct: 191 GAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 204/441 (46%), Gaps = 60/441 (13%)
Query: 85 PNKYHHTTPCYTAITDVLLSHSLISIAAS----LLKNSNKLSDFFISKLIKAYGDRGN-- 138
PN + H+ ++A+ +L+ + A + +++ S + L+ YG+ G+
Sbjct: 230 PN-FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNP 288
Query: 139 --VKAAIFWFHQAKQIENG-------------ACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + QA+++ G + + NSLLG LV+V + LA E + +
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348
Query: 184 IVKENV----------------------------------VPPDVSTYTTMIRGYCKMGM 209
+V+ V V PDV TY T+I YC+ G+
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 408
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+E A ++ D M+ +KP + YN +ING CK G+ AK ++EM+ G P+ TYN
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
++ C N + +A+ + +M G ++ + +++ L G DQA+ Y R++ A
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PD Y ++I GFC+ G EA+ + EM +G V ++N + L + L A
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEAD 588
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L +M + P+F ++ T+I G G M L + MI+ D Y+ L+ G
Sbjct: 589 ELFTEMTERGVFPDFYTFTTLINGY-XKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 647
Query: 447 YCEEGNVENVMQIAHEMVTKK 467
+C+ +E V ++ ++M++++
Sbjct: 648 FCKGSEMEKVNELWNDMISRR 668
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 157/288 (54%), Gaps = 7/288 (2%)
Query: 150 KQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ +E G L +YN++L L + + A+E F ++ + V P D T+TT+I GY K
Sbjct: 558 EMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP-DFYTFTTLINGYXKD 616
Query: 208 GMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G + A +F++M +KP+++ YNT+I+GFCK E+E+ + N+M++R PN ++Y
Sbjct: 617 GNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISY 676
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+I G C G V EA L +M GF+ + T +++KG C G +A +L N++
Sbjct: 677 GILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLL 736
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ PD +Y +INGF K D A +L+ +M GL P V ++N + G +
Sbjct: 737 KGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQE 796
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
A L++ +M + P+ +Y ++I G + + +++ + D M++ G
Sbjct: 797 AELIMLKMIERGVNPDRSTYTSLINGH-VTQNNLKEAFRVHDEMLQRG 843
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 168/380 (44%), Gaps = 75/380 (19%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN LL R +++ AE F ++ + VVP D+ +++ +I K G ++ A K F
Sbjct: 465 TYNILLVECCRNDNMMDAERIFDEMPSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRD 523
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+ + Y +I GFC+ G + EA K +EM+ +GC + +TYN ++ GLC
Sbjct: 524 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L +M G + T +++ G G ++AV +++ N+ PDV +Y
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 643
Query: 337 VINGFCK-----------------------------------IGKSDEAISLLKEMRARG 361
+I+GFCK +G EA L EM +G
Sbjct: 644 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 703
Query: 362 LKPTVFSFNAVFRILVENG-----------------------------------ELDRAI 386
+ T+ + N + + G +DRA
Sbjct: 704 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 763
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+ +M LP+ ++YN I+ G +GRMQ+ E ++ +MI G N D + Y+ L+ G
Sbjct: 764 ALVNKMENSGLLPDVITYNVILNGFS-RQGRMQEAELIMLKMIERGVNPDRSTYTSLING 822
Query: 447 YCEEGNVENVMQIAHEMVTK 466
+ + N++ ++ EM+ +
Sbjct: 823 HVTQNNLKEAFRVHDEMLQR 842
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 8/277 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNK---LSDFF-ISKLIKAYGDRGNVKAAIFWFHQAK 150
Y I + L ++S A L + DF+ + LI Y GN+ A+ F
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMI 630
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
Q + +YN+L+ + + ++ E ++ ++ + P +S Y +I GYC MG +
Sbjct: 631 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS-YGILINGYCNMGCV 689
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A +++D M K ++ NT++ G+C+ G +A + ++ M+ +G P+ +TYN +
Sbjct: 690 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 749
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G +D A L+ KM +G +V T+ +L G G+ +A + ++E +
Sbjct: 750 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 809
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
NPD +Y +ING EA + EM RG P
Sbjct: 810 NPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 125/246 (50%), Gaps = 4/246 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
Y++ +L+ + ++ A F +++ N+ PDV TY T+I G+CK +E +++
Sbjct: 603 FYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL-KPDVVTYNTLIDGFCKGSEMEKVNELW 661
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + PN ++Y +ING+C G + EA + +EM+ +G +T N ++ G C
Sbjct: 662 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 721
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +A ++ M L G + T+ +++ G D+A + + + + PDV +Y
Sbjct: 722 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 781
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V++NGF + G+ EA ++ +M RG+ P ++ ++ V L A + +M Q
Sbjct: 782 NVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 841
Query: 395 MDCLPN 400
+P+
Sbjct: 842 RGFVPD 847
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 197/398 (49%), Gaps = 27/398 (6%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLK---------------------NSNKLSDFFI-SK 128
T Y + L +H ++S A SL++ + SD ++ S
Sbjct: 1 TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSG 60
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY + G ++ AI + + + + +L L+++ KL F+ +I+ E
Sbjct: 61 LITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL-EC 119
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P + + ++ +CK G I A+ VFD +T ++P++++YNT++NG+ + G+L+E
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 179
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + M+ G +P+ TY+ +I G C + D+A L +M + G N +++ G
Sbjct: 180 FRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDG 239
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ EM +GLKP
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPD 299
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++ + + G+LD A K+M Q + + V Y +I GLC +GR D E ++
Sbjct: 300 KITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLC-XEGRSVDAEKML 358
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 359 REMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 396
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 156/291 (53%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F + + SYN+L+ +R+ L E F
Sbjct: 126 YFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD--LDEGFRLK 183
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK ++A ++FD M VK PN + + T+I+G CK
Sbjct: 184 SAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKN 243
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M G K + T+
Sbjct: 244 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITY 303
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G D A + + +++ N D Y +I+G C G+S +A +L+EM +
Sbjct: 304 TTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLS 363
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GLKP ++ + + G++ + LLK+M + +P+ V+YN ++ G
Sbjct: 364 VGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 125/242 (51%), Gaps = 1/242 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
+L +N +++ FCK G++ A+ + + G RP+ ++YN ++ G G +DE L
Sbjct: 123 ASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 182
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ M +G + +V T+ ++ G C K D A ++ + P+ + +I+G CK
Sbjct: 183 KSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCK 242
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+ D A+ + K+M ++ L P + ++N + L + G+L +A L+ +M P+ ++
Sbjct: 243 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKIT 302
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y T+I G C +G + + RMI+ LD Y+ L+ G C EG + ++ EM
Sbjct: 303 YTTLIDGCC-KEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREM 361
Query: 464 VT 465
++
Sbjct: 362 LS 363
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 148/318 (46%), Gaps = 17/318 (5%)
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKE-NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
SL+ V+V A F I + D+ ++ +I Y + G + +A + + +
Sbjct: 23 SLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTX 82
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKC---------MNEMMNRGCRPNELTYNAMIYGLC 272
+ ++T C+K LE K E++ G + +N +++ C
Sbjct: 83 EHKFWVPFDT-----CRK-VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC 136
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+G + A+ + + G + +V ++ +++ G +G D+ ++ + + PDV
Sbjct: 137 KDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 196
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y V+ING CK K D+A L EM +GL P F + +NG +D A+ + KQM
Sbjct: 197 TYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQM 256
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
P+ ++YNT+I GLC KG ++ L+D M G D Y+ L+ G C+EG+
Sbjct: 257 LSQSLSPDLITYNTLIYGLC-KKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGD 315
Query: 453 VENVMQIAHEMVTKKGRL 470
+++ + M+ + RL
Sbjct: 316 LDSAFEHXKRMIQENXRL 333
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 179/346 (51%), Gaps = 13/346 (3%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
+ +S L +A G G A + K + +G ++Y+ L L R K F
Sbjct: 137 NVLLSGLCRA-GRMGETSALLDEMASQKMVPDG---FTYSILFDGLSRNGDSKAMLSLFG 192
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
+ +K V D T + ++ G CK G + A++V + + P + YNT+ING+C+
Sbjct: 193 KYLKNGVTIGDY-TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 251
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
GELE A +M +R +P+ +TYNA+I GLC R+ A+ L+ +M+ NG V T
Sbjct: 252 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 311
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G+ ++ L + E + P+V SY ++N FCK GK EA+++L +M
Sbjct: 312 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 371
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+ + P +NA+ VE+G D+A +L+++M P+ V+YN +I GLC + ++
Sbjct: 372 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC-NQSQIS 430
Query: 420 DVEDLVDRMIRSGHNL--DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ E++++ + S H L D Y+ L+ C GN++ + + M
Sbjct: 431 EAEEIINSL--SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 474
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 148/308 (48%), Gaps = 4/308 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+++N + V + A ++ ++ PP+ +Y +I G + G +A +VFD
Sbjct: 28 FAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFD 87
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
MT V PN + YNTMI+G K G+LE + ++M+ G +PN +TYN ++ GLC G
Sbjct: 88 EMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG 147
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R+ E L+ +M + T+ + GL G + ++ + +
Sbjct: 148 RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCS 207
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++NG CK GK A +L+ + GL PT +N + + GEL+ A QM
Sbjct: 208 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 267
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ ++YN +I GLC A+ R+ + +DL+ M +G N ++ L+ Y G +E
Sbjct: 268 HIKPDHITYNALINGLCKAE-RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 326
Query: 456 VMQIAHEM 463
+ EM
Sbjct: 327 CFIVLSEM 334
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 159/313 (50%), Gaps = 5/313 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G ++ A F Q K +YN+L+ L + I A++ ++ ++N
Sbjct: 244 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM-QDN 302
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V P V T+ T+I Y + G +E V M +KPN+++Y +++N FCK G++ EA
Sbjct: 303 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 362
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+++M ++ PN YNA+I +G D+A +L+ KM+ NG ++ T+ ++KG
Sbjct: 363 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 422
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + +A + ++ + PD SY +I+ C G D+A+ L + M G+K T
Sbjct: 423 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 482
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V +++ + L G L+ L ++M Q + +P+ +N ++ ++ EDL
Sbjct: 483 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIK-AEDLR 541
Query: 426 DRMIRSGHNLDFT 438
M++ +N D T
Sbjct: 542 KEMLQKRNNHDDT 554
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 177/375 (47%), Gaps = 17/375 (4%)
Query: 102 LLSHSLISIAASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--- 157
L H+ + A +L ++ D F +K ++A G++ A+ + + +GA
Sbjct: 5 LGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGR--DGAPPPN 62
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+SYN ++ + R A E F ++ + V+P + TY TMI G+ K G +E ++
Sbjct: 63 AFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHI-TYNTMIDGHIKGGDLEAGFRLR 121
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +KPN + YN +++G C+ G + E ++EM ++ P+ TY+ + GL N
Sbjct: 122 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 181
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G L K NG T +L GLC GK A L++++ A + P Y
Sbjct: 182 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 241
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ING+C+ G+ + A S +M++R +KP ++NA+ L + + A LL +M
Sbjct: 242 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 301
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
P ++NT+I A GR +E ++ M +G + Y ++ +C+ G
Sbjct: 302 NGVNPTVETFNTLID----AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 357
Query: 452 NVENVMQIAHEMVTK 466
+ + I +M K
Sbjct: 358 KIPEAVAILDDMFHK 372
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 2/144 (1%)
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP-TVFSFNAVFRILVENGELD 383
A PD ++ + G EA+ +L+ M G P FS+N V + G
Sbjct: 21 AGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGG 80
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A+ + +M + LPN ++YNT+I G + G ++ L D+M+ G + Y+ L
Sbjct: 81 DAVEVFDEMTERAVLPNHITYNTMIDGH-IKGGDLEAGFRLRDQMVCHGLKPNAITYNVL 139
Query: 444 LKGYCEEGNVENVMQIAHEMVTKK 467
L G C G + + EM ++K
Sbjct: 140 LSGLCRAGRMGETSALLDEMASQK 163
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 230/497 (46%), Gaps = 61/497 (12%)
Query: 1 MATPRRSLTNISQIPDQSILVTSITSVIQRLNPQN-PSPKNISSQPLDQFSLCLGSNIVT 59
+ TP + ++ S +P + S++ + N QN PS K++ + + V+
Sbjct: 27 LHTPPEAESDPSHLPHH------LLSILSKPNWQNNPSLKSLLPA--------ITPSHVS 72
Query: 60 KVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLIS----IAASLL 115
+ +P+ AL F W S PN + H Y ++ ++ H ++S I S++
Sbjct: 73 SLFSLNLDPHTALQFSYWISQ---TPN-FKHNVDSYASLLTLIDHHKIVSDVPKIIVSMI 128
Query: 116 KNSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSI 174
K D F+S + + K + L YN LL +L R +
Sbjct: 129 KCCYSAPDALFVSDICRKMSKDDITKLS---------------LKCYNELLTLLARFGLV 173
Query: 175 KLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNT 231
+ + ++++E V D+ T+ MI YCKMG ++ AK+ M + P+ +
Sbjct: 174 DEMNQLYTEMLEE-FVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTS 232
Query: 232 MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG 291
I G+C+ +++ A + EM NR NE++YN +I+GLC GR+DEA L +M+ +
Sbjct: 233 FILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDC 288
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
NV T+ +++KGLC +A+G L ++E N+ PD+ +Y +I G C+ G D A
Sbjct: 289 CYPNVYTYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAY 347
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
LL M+ RGL P ++ L ++ ++ A L + + N + Y+ +I G
Sbjct: 348 RLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGY 407
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK---- 467
C G++ + L ++M+ + + ++ L+ G C GN++ + + +MV
Sbjct: 408 CKV-GKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPT 466
Query: 468 --------GRLLKLKNF 476
GR+LK +F
Sbjct: 467 VYTFNILIGRMLKQGDF 483
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 171/345 (49%), Gaps = 11/345 (3%)
Query: 123 DFFIS-KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
D+F S I Y +V +A F + SYN L+ L I A F
Sbjct: 226 DYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNE----VSYNQLIHGLCEAGRIDEAVSLF 281
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
++ K++ P+V TYT +I+G C+ + A + D M + P+L+ YN++I G C+
Sbjct: 282 VRM-KDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCR 339
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G L+ A + ++ M RG P++ TY I LC + RV+EA+ L + G NV
Sbjct: 340 AGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIM 399
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ ++ G C VGK D+A ++ N +P+ ++ +I+G C G EA+SL +M
Sbjct: 400 YSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMV 459
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
GLKPTV++FN + +++ G+ D A L++M P +YN I C A G++
Sbjct: 460 KMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSA-GKV 518
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Q+ ED++ +M G D Y+ L+K Y + G + + M
Sbjct: 519 QEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSM 563
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 133/254 (52%), Gaps = 4/254 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YNSL+ R + A ++KE + PD TY I CK +E A+++F
Sbjct: 327 LITYNSLIAGQCRAGHLDSAYRLL-SLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLF 385
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D +T V N++ Y+ +I+G+CK G+++EA +M+++ C PN T+NA+I+GLC
Sbjct: 386 DSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSA 445
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + EA L +M G K V T ++ + G FD A L+ +M + P ++Y
Sbjct: 446 GNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTY 505
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
I +C GK EA ++ +M+ G+ P F++ ++ + + G A +LK M
Sbjct: 506 NAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFD 565
Query: 395 MDCLPNFVSYNTII 408
DC P+ ++ ++I
Sbjct: 566 ADCEPSHHTFLSLI 579
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 154/341 (45%), Gaps = 41/341 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y + L + N ++ A F + +E V +V Y+ +I GYCK+G ++ A +F+
Sbjct: 364 TYGCFIDFLCKSNRVEEARRLFDSLTEEGV-SANVIMYSVLIDGYCKVGKVDEAGCLFEK 422
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN +N +I+G C G L+EA ++M+ G +P T+N +I + G
Sbjct: 423 MLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGD 482
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D+A + KM +G K T+ + ++ C GK +A + + E + PD +Y
Sbjct: 483 FDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTS 542
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV----------ENG------ 380
+I + K+G + A +LK M +P+ +F ++ + L E G
Sbjct: 543 LIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSN 602
Query: 381 -------------ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
E D I L ++M + C P+ Y +I G+C + + L+D+
Sbjct: 603 FGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVE-NLGIALKLLDQ 661
Query: 428 MIRSGHNLDFTMYS------CLLKGYCEEGN-VENVMQIAH 461
M + G + +++ C L+ Y E N VE+++ H
Sbjct: 662 MQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGH 702
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 151/369 (40%), Gaps = 34/369 (9%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI Y G V A F + Y++N+L+ L ++K A F Q+VK
Sbjct: 401 SVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVK 460
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELE 243
+ P V T+ +I K G ++A K M KP YN I +C G+++
Sbjct: 461 MGL-KPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQ 519
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ M +M G P++ TY ++I G A ++ M + + T S++
Sbjct: 520 EAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLI 579
Query: 304 KGL----CVVGK-------------------------FDQAVGYLRNVMEANMNPDVKSY 334
K L VV K FD + + + PD K Y
Sbjct: 580 KQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCY 639
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
E +I+G CK+ A+ LL +M+ G+ P+ FNAV + + A +++ M
Sbjct: 640 EKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMIC 699
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P T+ICGL +G + + ++ G+N D + L+ G ++G VE
Sbjct: 700 SGHSPQLEHCKTLICGL-YEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVE 758
Query: 455 NVMQIAHEM 463
Q+ EM
Sbjct: 759 EFSQLFEEM 767
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 118/271 (43%), Gaps = 35/271 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
+YN+ + V ++ AE+ Q+ KE VPPD TYT++I+ Y K+G+ +A K
Sbjct: 504 TYNAFIEVYCSAGKVQEAEDMMVQM-KEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKS 562
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKG-----------------------------ELEEAK 246
+FD +P+ + ++I K E +
Sbjct: 563 MFDA-DCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVI 621
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ EM GC P+ Y +I G+C + A L+ +M+ G + +++
Sbjct: 622 ELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCC 681
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C + K+ +A + +++ + +P ++ + +I G + G+++ S+ K++R G
Sbjct: 682 CKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDE 741
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++ + +++ G ++ L ++M + C
Sbjct: 742 IAWKILIDGMLKQGLVEEFSQLFEEMEKNGC 772
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 12/251 (4%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
DF + LIKAYG G +A F K + + C S+++ L ++ ++ + E
Sbjct: 537 DFTYTSLIKAYGKLGLTYSA---FDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSG 593
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
+ E+V + M KM + ++F+ M P+ Y +I+G CK
Sbjct: 594 ETGVESVSNFGDVPGSNMW----KMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKV 649
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
L A K +++M G P+E+ +NA+I C + EA ++ M +G +
Sbjct: 650 ENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHC 709
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
K+++ GL G+ ++ + + N D +++++I+G K G +E L +EM
Sbjct: 710 KTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEK 769
Query: 360 RG--LKPTVFS 368
G P +S
Sbjct: 770 NGCNFSPRTYS 780
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 179/346 (51%), Gaps = 13/346 (3%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
+ +S L +A G G A + K + +G ++Y+ L L R K F
Sbjct: 89 NVLLSGLCRA-GRMGETSALLDEMASQKMVPDG---FTYSILFDGLSRNGDSKAMLSLFG 144
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
+ +K V D T + ++ G CK G + A++V + + P + YNT+ING+C+
Sbjct: 145 KYLKNGVTIGDY-TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 203
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
GELE A +M +R +P+ +TYNA+I GLC R+ A+ L+ +M+ NG V T
Sbjct: 204 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 263
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G+ ++ L + E + P+V SY ++N FCK GK EA+++L +M
Sbjct: 264 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 323
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+ + P +NA+ VE+G D+A +L+++M P+ V+YN +I GLC + ++
Sbjct: 324 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC-NQSQIS 382
Query: 420 DVEDLVDRMIRSGHNL--DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ E++++ + S H L D Y+ L+ C GN++ + + M
Sbjct: 383 EAEEIINSL--SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 426
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 159/313 (50%), Gaps = 5/313 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G ++ A F Q K +YN+L+ L + I A++ ++ ++N
Sbjct: 196 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM-QDN 254
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V P V T+ T+I Y + G +E V M +KPN+++Y +++N FCK G++ EA
Sbjct: 255 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 314
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+++M ++ PN YNA+I +G D+A +L+ KM+ NG ++ T+ ++KG
Sbjct: 315 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 374
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + +A + ++ + PD SY +I+ C G D+A+ L + M G+K T
Sbjct: 375 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 434
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V +++ + L G L+ L ++M Q + +P+ +N ++ ++ EDL
Sbjct: 435 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIK-AEDLR 493
Query: 426 DRMIRSGHNLDFT 438
M++ +N D T
Sbjct: 494 KEMLQKRNNHDDT 506
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 4/287 (1%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
++ ++ PP+ +Y +I G + G +A +VFD MT V PN + YNTMI+G
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+LE + ++M+ G +PN +TYN ++ GLC GR+ E L+ +M +
Sbjct: 61 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ + GL G + ++ + + +++NG CK GK A +L+
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
+ GL PT +N + + GEL+ A QM P+ ++YN +I GLC A+
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE- 239
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R+ + +DL+ M +G N ++ L+ Y G +E + EM
Sbjct: 240 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 286
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 151/314 (48%), Gaps = 11/314 (3%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+SYN ++ + R A E F ++ + V+P + TY TMI G+ K G +E ++ D
Sbjct: 16 FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHI-TYNTMIDGHIKGGDLEAGFRLRD 74
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M +KPN + YN +++G C+ G + E ++EM ++ P+ TY+ + GL NG
Sbjct: 75 QMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNG 134
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
L K NG T +L GLC GK A L++++ A + P Y
Sbjct: 135 DSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 194
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+ING+C+ G+ + A S +M++R +KP ++NA+ L + + A LL +M
Sbjct: 195 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 254
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
P ++NT+I A GR +E ++ M +G + Y ++ +C+ G
Sbjct: 255 GVNPTVETFNTLID----AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 310
Query: 453 VENVMQIAHEMVTK 466
+ + I +M K
Sbjct: 311 IPEAVAILDDMFHK 324
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Query: 353 LLKEMRARGLKP-TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+L+ M G P FS+N V + G A+ + +M + LPN ++YNT+I G
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDG- 59
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ G ++ L D+M+ G + Y+ LL G C G + + EM ++K
Sbjct: 60 HIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 115
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 203/415 (48%), Gaps = 37/415 (8%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
N V VI + + L F+++ N N N N I+ LS +L+ A L
Sbjct: 152 NSVLNVIINEGLYHRGLEFYDYVVNSNMNMN-----------ISPNGLSFNLVIKALCKL 200
Query: 116 KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK 175
+ F+ + I+ + RG + K + +G Y+Y +L+ L + I
Sbjct: 201 R--------FVDRAIEVF--RG--------MPERKCLPDG---YTYCTLMDGLCKEERID 239
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTM 232
A ++ E P V Y +I G CK G + K+ D M +K PN + YNT+
Sbjct: 240 EAVLLLDEMQSEGCSPSPV-IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
I+G C KG+L++A + M++ C PN++TY +I GL R +A L++ M G+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
N + ++ GL GK ++A+ R + E P++ Y V+++G C+ GK +EA
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+L M A G P ++++++ + + G + A+ + K+M + C N Y+ +I GLC
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
GR+++ + +M+ G D YS ++KG C G+++ +++ HEM+ ++
Sbjct: 479 -GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 181/389 (46%), Gaps = 45/389 (11%)
Query: 118 SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL-YSYNSLLGVLVRVNSIKL 176
S KL D +S +I++Y + G+ + + + +EN + S+ + + +
Sbjct: 72 SFKLGDSTLSSMIESYANSGDFDSVEKLLSRIR-LENRVIIERSFIVVFRAYGKAHLPDK 130
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV-------MTVKPNLLAY 229
A + FH++V E V ++ +++ G+ + +D M + PN L++
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSF 190
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR- 288
N +I CK ++ A + M R C P+ TY ++ GLC R+DEA +L+ +M+
Sbjct: 191 NLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS 250
Query: 289 ----------------------------------LNGFKDNVSTHKSMLKGLCVVGKFDQ 314
L G N T+ +++ GLC+ GK D+
Sbjct: 251 EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
AV L ++ + P+ +Y +ING K ++ +A+ LL M RG ++ +
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L + G+ + A+ L ++M + C PN V Y+ ++ GLC +G+ + +++++RMI SG
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC-REGKPNEAKEILNRMIASGCL 429
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ YS L+KG+ + G E +Q+ EM
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 125/245 (51%), Gaps = 12/245 (4%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y+ +I G K G E A ++ M KPN++ Y+ +++G C++G+ EAK+ +N M+
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
GC PN TY++++ G G +EA + +M G N + ++ GLC VG+
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR---GLKPTVFSFN 370
+A+ ++ + PD +Y +I G C IG D A+ L EM + +P V ++N
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA-----KGRMQDVEDLV 425
+ L ++ RA+ LL M C P+ ++ NT + L KGR +E+LV
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGR-SFLEELV 603
Query: 426 DRMIR 430
R+++
Sbjct: 604 VRLLK 608
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 7/224 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y+ L+ L + + A + ++ E P++ Y+ ++ G C+ G AK++ + M
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMA-EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
PN Y++++ GF K G EEA + EM GC N+ Y+ +I GLC GRV
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM---EANMNPDVKSY 334
EA M+ +KM G K + + S++KGLC +G D A+ ++ E PDV +Y
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
++++G C A+ LL M RG P V + N L E
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 117/253 (46%), Gaps = 36/253 (14%)
Query: 110 IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACL---YSYNSLL 165
IA+ L N+ + S L+K + G + A+ W K+++ C + Y+ L+
Sbjct: 424 IASGCLPNA-----YTYSSLMKGFFKTGLCEEAVQVW----KEMDKTGCSRNKFCYSVLI 474
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK-- 223
L V +K A + +++ + PD Y+++I+G C +G ++ A K++ M +
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGI-KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 533
Query: 224 ----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC-INGRVD 278
P+++ YN +++G C + ++ A +N M++RGC P+ +T N + L + D
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCD 593
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+ + + ++ + K + + G C + + ++ + P ++ +++
Sbjct: 594 KGRSFLEELVVRLLK------RQRVSGACTI---------VEVMLGKYLAPKTSTWAMIV 638
Query: 339 NGFCKIGKSDEAI 351
CK K + AI
Sbjct: 639 REICKPKKINAAI 651
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 202/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + H Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 153/300 (51%), Gaps = 39/300 (13%)
Query: 143 IFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP--------- 191
+ W + +E G A LY +N L+ V+ I+LA+ F I K ++ P
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLM 178
Query: 192 -------------------------PDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVK 223
PDV TY+ +I G CK +++A ++FD M +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV 238
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN + + T+I+G CK G ++ A + +M+++ P+ +TYN +IYGLC G + +A+ L
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +M + G K + T+ +++ G C G + A Y + +++ N+ D +Y +I+G C+
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQ 358
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+S +A +L+EM + GLKP + ++ + + G++ LLK+M + +P+ V+
Sbjct: 359 EGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 168/311 (54%), Gaps = 10/311 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN +L +LV + ++A F+ ++ V P V T+ +++ C + +++A +
Sbjct: 172 SYNVVLDILVDGDCPRVAPNVFYDMLSRGV-SPTVYTFGVVMKALCMVSEVDSACSLLRD 230
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M PN + Y T+I+ C+ + EA + + +M C P+ T+N +I+GLC GR
Sbjct: 231 MAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGR 290
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L+ +M L GF + T+ ++ GLC +G+ D+A R ++ NP+ Y
Sbjct: 291 IHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEA----RALLNKIPNPNTVLYNT 346
Query: 337 VINGFCKIGKSDEAISLL-KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+G+ G+ +EA LL M G +P ++FN + LV+ G L A+ LL +M
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAK 406
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
PN ++Y +I G C +GR+++ ++V+ M G +L+ Y+CL+ C++GN+E
Sbjct: 407 RFEPNVITYTILINGFC-KQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEE 465
Query: 456 VMQIAHEMVTK 466
+Q+ EM K
Sbjct: 466 ALQLFGEMSGK 476
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 159/308 (51%), Gaps = 4/308 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N ++ L R I A + +++ D TY ++ G C+MG ++ A+ + +
Sbjct: 277 TFNDVIHGLCRAGRIHEAAKLLDRMLLRGF-STDALTYGYLMHGLCRMGQVDEARALLNK 335
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCM-NEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ PN + YNT+I+G+ G EEAK + N M+ G P+ T+N MI GL G +
Sbjct: 336 IP-NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLV 394
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
A L+ +M F+ NV T+ ++ G C G+ ++A + ++ ++ + Y +I
Sbjct: 395 SALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLI 454
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
CK G +EA+ L EM +G KP +++FN++ L +N +++ A+ L M +
Sbjct: 455 CALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVI 514
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
N V+YNT++ M + +Q LVD M+ G LD Y+ L+K C+ G VE +
Sbjct: 515 ANTVTYNTLVHAFLM-RDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLG 573
Query: 459 IAHEMVTK 466
+ EM+ K
Sbjct: 574 LFEEMLGK 581
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 156/312 (50%), Gaps = 4/312 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ V + A++ + + PD T+ MI G K G + +A ++ + M
Sbjct: 344 YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K PN++ Y +INGFCK+G LEEA + +N M +G N + YN +I LC +G +
Sbjct: 404 VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNI 463
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA L +M G K ++ T S++ GLC K ++A+ ++ + + +Y +
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 523
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++ F +A L+ EM RG ++N + + L + G +++ + L ++M
Sbjct: 524 VHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGI 583
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P +S N +I GLC G++ D + MI G D Y+ L+ G C+ G+V+
Sbjct: 584 FPTIISCNILISGLCRT-GKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEAS 642
Query: 458 QIAHEMVTKKGR 469
+ +++ ++ R
Sbjct: 643 NLFNKLQSEGIR 654
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 137/252 (54%), Gaps = 4/252 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
YN L+ L + +I+ A + F ++ + PD+ T+ ++I G CK +E A ++
Sbjct: 449 GYNCLICALCKDGNIEEALQLFGEMSGKGC-KPDIYTFNSLINGLCKNHKMEEALSLYHD 507
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V N + YNT+++ F + +++A K ++EM+ RGC + +TYN +I LC G
Sbjct: 508 MFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGA 567
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L +M G + + ++ GLC GK + A+ +L++++ + PD+ +Y
Sbjct: 568 VEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNS 627
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING CK+G EA +L ++++ G++P ++N + G + A LLL +
Sbjct: 628 LINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSG 687
Query: 397 CLPNFVSYNTII 408
+PN V+++ +I
Sbjct: 688 FIPNEVTWSILI 699
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 150/312 (48%), Gaps = 40/312 (12%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++N ++ LV+ + A E +++V + P+V TYT +I G+CK G +E A ++ +
Sbjct: 378 YTFNIMIDGLVKKGYLVSALELLNEMVAKRF-EPNVITYTILINGFCKQGRLEEAAEIVN 436
Query: 219 VMTVK--------------------------------------PNLLAYNTMINGFCKKG 240
M+ K P++ +N++ING CK
Sbjct: 437 SMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNH 496
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++EEA ++M G N +TYN +++ + + +A L+ +M G + T+
Sbjct: 497 KMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYN 556
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++K LC G ++ +G ++ + P + S ++I+G C+ GK ++A+ L++M R
Sbjct: 557 GLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHR 616
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GL P + ++N++ L + G + A L ++ P+ ++YNT+I C +G D
Sbjct: 617 GLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHC-HEGMFND 675
Query: 421 VEDLVDRMIRSG 432
L+ + + SG
Sbjct: 676 ACLLLYKGVDSG 687
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 157/313 (50%), Gaps = 19/313 (6%)
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV----FDV 219
L+ L V K+ E+ Q+ E ++ + S + +++ Y K G+ A ++ + V
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKE-SLFILIMKHYGKAGLPGQATRLLLDMWGV 163
Query: 220 MTVKPNLLAYNT----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ P +YN +++G C + A +M++RG P T+ ++ LC+
Sbjct: 164 YSCDPTFKSYNVVLDILVDGDCPR----VAPNVFYDMLSRGVSPTVYTFGVVMKALCMVS 219
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
VD A L+ M +G N +++++ LC + +A+ L ++ PDV+++
Sbjct: 220 EVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFN 279
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
VI+G C+ G+ EA LL M RG ++ + L G++D A LL ++P
Sbjct: 280 DVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN- 338
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLV-DRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN V YNT+I G +A GR ++ +DL+ + M+ +G+ D ++ ++ G ++G +
Sbjct: 339 ---PNTVLYNTLISGY-VASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLV 394
Query: 455 NVMQIAHEMVTKK 467
+ +++ +EMV K+
Sbjct: 395 SALELLNEMVAKR 407
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 4/253 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A GN++ A+ F + +Y++NSL+ L + + ++ A +H + E
Sbjct: 453 LICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEG 512
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEA 245
V+ V TY T++ + I+ A K+ D M + + + YN +I CK G +E+
Sbjct: 513 VIANTV-TYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKG 571
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
EM+ +G P ++ N +I GLC G+V++A + M G ++ T+ S++ G
Sbjct: 572 LGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLING 631
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +G +A + + PD +Y +I+ C G ++A LL + G P
Sbjct: 632 LCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPN 691
Query: 366 VFSFNAVFRILVE 378
+++ + +V+
Sbjct: 692 EVTWSILINYIVK 704
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 159/311 (51%), Gaps = 13/311 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ ++ A E ++ + + PD TY T+I G+CK+G +E+A KVFD
Sbjct: 149 TYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDE 208
Query: 220 M----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M V P+ + YN +I G+C +G+L+ A + +M+ RG TYN +++ L ++G
Sbjct: 209 MLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDG 268
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R +A ++ +M+ NG +V T+ ++ G C G +A+ + + +Y
Sbjct: 269 RASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYT 328
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I F + G+ E L K +G++P V +NA+ G+++RA ++ +M +
Sbjct: 329 SLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKK 388
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ V+YNT+I G C+ GR+ + L+D M + G D G C+ G ++
Sbjct: 389 RIPPDDVTYNTLIRGFCLL-GRLDEARGLIDEMTKRGIQPDL--------GLCKNGQGDD 439
Query: 456 VMQIAHEMVTK 466
+ EMV K
Sbjct: 440 AENLMKEMVGK 450
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 147/280 (52%), Gaps = 4/280 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
+P +T+ M+R C G A ++ M +PN + YNT+I GFC +G ++ A + M
Sbjct: 112 LPLCTTTFNIMLRHLCATGKPVRALELLRQMP-RPNAVTYNTVIAGFCARGRVQAALEVM 170
Query: 250 NEMMNR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLC 307
EM R G P++ TY +I G C GR+++A + +M G + + +++ G C
Sbjct: 171 REMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYC 230
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
GK D A+ Y ++++ + V +Y ++++ G++ +A ++L+EM+ GL P VF
Sbjct: 231 DRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVF 290
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++N + + G +A+ + ++M + V+Y ++I KG++Q+ + L
Sbjct: 291 TYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSR-KGQVQETDRLFKV 349
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
++ G D MY+ L+ +C G++E +I EM K+
Sbjct: 350 AVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKR 389
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 124/239 (51%), Gaps = 12/239 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y DRG + A+ + Q + +YN L+ L A ++ + N
Sbjct: 225 LIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEM-QRN 283
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ PDV TY +I GYCK G + A +VF+ M+ V+ + Y ++I F +KG+++E
Sbjct: 284 GLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQET 343
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + +G RP+ + YNA+I C G ++ A +MA+M + T+ ++++G
Sbjct: 344 DRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRG 403
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
C++G+ D+A G + + + + PD+ G CK G+ D+A +L+KEM +G+ P
Sbjct: 404 FCLLGRLDEARGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEMVGKGITP 454
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 165/380 (43%), Gaps = 55/380 (14%)
Query: 88 YHHTTPCYTAITDVLLSHSLIS----IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAI 143
Y P T +++L H + A LL+ + + + +I + RG V+AA+
Sbjct: 108 YRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAAL 167
Query: 144 FWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
+ + E G Y+Y +L+ ++ ++ A + F +++ + V P Y +
Sbjct: 168 EVMREMR--ERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNAL 225
Query: 201 IRGYCKMGMIE-----------------------------------NAKKVFDVMT---V 222
I GYC G ++ +A V + M +
Sbjct: 226 IGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGL 285
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P++ YN +ING+CK+G ++A + EM +G R +TY ++IY G+V E
Sbjct: 286 SPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDR 345
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L G + +V + +++ C G ++A + + + + PD +Y +I GFC
Sbjct: 346 LFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFC 405
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+G+ DEA L+ EM RG++P + L +NG+ D A L+K+M P+
Sbjct: 406 LLGRLDEARGLIDEMTKRGIQPDLG--------LCKNGQGDDAENLMKEMVGKGITPDDS 457
Query: 403 SYNTIICGLCMAKGRMQDVE 422
+Y ++I GL +M +
Sbjct: 458 TYISLIEGLTTVDEQMSAAD 477
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 180/380 (47%), Gaps = 10/380 (2%)
Query: 91 TTPCYTAITDVLLSHSLIS----IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWF 146
T Y A+ D L+ + + + S + + LI A +RG V A+
Sbjct: 127 TAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVL 186
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ +YN LL + + A E + E P +V TY +I C+
Sbjct: 187 DGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNV-TYNVIIDAMCR 245
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G ++ A+++ + + KPN + YNT++ GFC +A + ++EM+ C PNE T
Sbjct: 246 EGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEAT 305
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
N +I LC G + + + + KM +G NV T+ +++ G+C G D A+ L N+
Sbjct: 306 LNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQ 365
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
PD+ +Y V+ G C + ++A L+ +M P +FN + + G +
Sbjct: 366 SFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLIL 425
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+A + KQMP+ C PN +Y+TII GL A G+M+ +L++ M G N D MY L
Sbjct: 426 QAFEVFKQMPEKGCNPNSTTYSTIIGGLTKA-GKMEQALELLNEMANKGFNTD-KMYRVL 483
Query: 444 LKGYCEEGNVENVMQIAHEM 463
+ +E +E V+Q+ H++
Sbjct: 484 TESLNKEDKIEEVVQVVHKL 503
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 161/323 (49%), Gaps = 5/323 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++N L+ L + A ++ P DV TY +++ CK A ++ D
Sbjct: 164 YAHNPLIHALCERGRVADALVVLDGMLCRGCAP-DVVTYNILLQAACKGRGYRQALELID 222
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + PN + YN +I+ C++G++++A++ +N + +RGC+PN + YN ++ G C
Sbjct: 223 FMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIE 282
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R +A ++ +M N +T ++ LC G + YL + + +V +Y
Sbjct: 283 RWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYN 342
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
VI+G C+ G D A+ LL M++ G KP + ++N V + L + A L+ +M Q
Sbjct: 343 AVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQN 402
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
D LP+ ++NTII C KG + ++ +M G N + T YS ++ G + G +E
Sbjct: 403 DRLPDNSTFNTIISFWCQ-KGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQ 461
Query: 456 VMQIAHEMVTKKGRLLKLKNFLT 478
+++ +EM K K+ LT
Sbjct: 462 ALELLNEMANKGFNTDKMYRVLT 484
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 141/281 (50%), Gaps = 1/281 (0%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGEL 242
++V + PPDV ++R C+ G +A +V + + Y +++G+C+ G L
Sbjct: 85 RLVGSSPRPPDVPLANRLVRDLCRRGRPADAARVVEACGPEATAATYGALVDGYCRAGLL 144
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E+A++ + M + +N +I+ LC GRV +A +++ M G +V T+ +
Sbjct: 145 EDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNIL 204
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
L+ C + QA+ + + P+ +Y V+I+ C+ G D+A LL + +RG
Sbjct: 205 LQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGC 264
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KP ++N V + A +L +M + +C PN + N II LC KG +Q V
Sbjct: 265 KPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCR-KGLLQKVT 323
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+++M + G + Y+ ++ G CE+GNV++ +++ M
Sbjct: 324 LYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNM 364
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 39/306 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L + A+E ++V+EN PP+ +T +I C+ G+++ +
Sbjct: 270 NYNTVLKGFCSIERWVDADEILDEMVRENC-PPNEATLNVIINTLCRKGLLQKVTLYLEK 328
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ N++ YN +I+G C++G ++ A + ++ M + GC+P+ +TYN ++ GLC R
Sbjct: 329 MSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADR 388
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++A+ LM KM N + ST +++ C G QA + + E NP+ +Y
Sbjct: 389 WEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYST 448
Query: 337 VINGFCKIGKSDEAISLLKEMRARG----------------------------------L 362
+I G K GK ++A+ LL EM +G +
Sbjct: 449 IIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGI 508
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P +N V L NG+ D AI +L M C+P+ +Y +I GL +G ++
Sbjct: 509 SPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGL-FYEGYSKEAR 567
Query: 423 DLVDRM 428
+L+ R+
Sbjct: 568 ELLSRL 573
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 122/235 (51%), Gaps = 5/235 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I ++GNV +A+ + + +YN++L L + + AEE ++ + +
Sbjct: 344 VISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 403
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+P D ST+ T+I +C+ G+I A +VF M K PN Y+T+I G K G++E+A
Sbjct: 404 RLP-DNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQA 462
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +NEM N+G +++ Y + L +++E ++ K++ +G + ++L G
Sbjct: 463 LELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLG 521
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
LC GK D A+ L +++ PD +Y ++I G G S EA LL + +R
Sbjct: 522 LCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSR 576
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 136/276 (49%), Gaps = 5/276 (1%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
+G ++ + + + A + +YN+++ + ++ A E + + PD+
Sbjct: 316 KGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNM-QSFGCKPDIV 374
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY T+++G C E+A+++ M+ P+ +NT+I+ +C+KG + +A + +M
Sbjct: 375 TYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQM 434
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+GC PN TY+ +I GL G++++A L+ +M GF + ++ + + L K
Sbjct: 435 PEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD-KMYRVLTESLNKEDKI 493
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
++ V + + ++ ++P Y V+ G C+ GK+D AI +L +M + G P ++ +
Sbjct: 494 EEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIIL 553
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
L G A LL ++ D L N + N +
Sbjct: 554 IEGLFYEGYSKEARELLSRLCSRDVLSNSLIKNEAL 589
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 161/310 (51%), Gaps = 5/310 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+ + L+ ++ + L +I+K + + T+ T+I G CK+G A ++FD
Sbjct: 158 YTLHMLINCFFQLQRVDLGFSVLAKIIKLGL-QLTIVTFNTLINGLCKVGKFGQAVELFD 216
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + P++ Y T+ING CK GE A +M GC+P+ +TY+ +I LC +
Sbjct: 217 DMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDR 276
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
RV+EA + + M+ G N+ T+ S+++GLC ++ +A L +M N+ P++ ++
Sbjct: 277 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 336
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++IN FCK G EA +LK M G++P V +++++ E+ A L M
Sbjct: 337 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITK 396
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C P+ SYN +I G C AK R+ + + L + MI G D Y+ L+ G C+ G +
Sbjct: 397 GCKPDVFSYNILINGYCKAK-RIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 455
Query: 456 VMQIAHEMVT 465
+ M+T
Sbjct: 456 AHDLFKNMLT 465
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 179/334 (53%), Gaps = 7/334 (2%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
R N IF + +AK I +++YNSL+ L + + A ++++ N++P ++
Sbjct: 277 RVNEALDIFSYMKAKGISPN--IFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP-NIV 333
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
T++ +I +CK G + A+ V MT V+PN++ Y++++NG+ + E+ EA+K + M
Sbjct: 334 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ +GC+P+ +YN +I G C R+ EAK L +M G ++ ++ +++ GLC +G+
Sbjct: 394 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 453
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+A +N++ PD+ +Y ++++GFCK G +A L + M++ LKP + +N +
Sbjct: 454 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 513
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ ++ L A L ++ PN Y TII GLC +G + + + M G
Sbjct: 514 IDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLC-KEGLLDEALEAFRNMEEDG 572
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ Y+ +++G+ + + +Q+ EM K
Sbjct: 573 CPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREK 606
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 125/287 (43%), Gaps = 42/287 (14%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
PN Y Y+ +V+ + L + ++ K F + LI Y + A
Sbjct: 365 PNVVTYSSLMNGYSLQAEVVEARKLFDV---MITKGCKPDVFSYNILINGYCKAKRIGEA 421
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
F++ + SYN+L+ L ++ ++ A + F ++ +P D+ TY+ ++
Sbjct: 422 KQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLP-DLCTYSILLD 480
Query: 203 GYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
G+CK G + A ++F M +KPN++ YN +I+ CK L+EA+K +E+ +G +P
Sbjct: 481 GFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQP 540
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N Y +I GLC G +DEA L F
Sbjct: 541 NVQIYTTIINGLCKEGLLDEA--------LEAF--------------------------- 565
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
RN+ E P+ SY V+I GF + A+ L+ EMR +G V
Sbjct: 566 RNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADV 612
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 163/284 (57%), Gaps = 10/284 (3%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
P + T+ T+I G C+ +E A + M VK +++ YNT+++G CK G L+EA++
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQL 209
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M GC P+ + Y++ +YGLC +G+V +A ++ +MR + NV T+ ++L GLC
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCK 269
Query: 309 VGKFDQAVGYLRNVMEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
GK D A+ + + ++ +V Y V++G CK+G++ EA S+++ M G +P V
Sbjct: 270 SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+++++ L + G+++ A+ +++M C PN V+Y +++ GLC + GR+ + E +V+
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLC-SCGRLAEAERMVEE 388
Query: 428 MIRSGHNL-----DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M G + Y+ L+ G C+ G +++ ++ M ++
Sbjct: 389 MSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQ 432
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 148/261 (56%), Gaps = 10/261 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ L + ++ AE+ ++ K + PDV Y++ + G CK G + +A +V +
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERM-KASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQ 247
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNR-GCRPNELTYNAMIYGLCING 275
M PN++ YNT+++G CK G+++ A + M +M + GC N + Y+ ++ GLC G
Sbjct: 248 MRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R EA+ +M M G + +V T+ S++ GLC GK ++AV +R + P+ +Y
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYC 367
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLK-----PTVFSFNAVFRILVENGELDRAILLLK 390
+++G C G+ EA +++EM + G P+V ++NA+ L + G +D A+ +
Sbjct: 368 SLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427
Query: 391 QMPQMDCLPNFVSYNTIICGL 411
+M C P+ VSY+TI+ GL
Sbjct: 428 RMRSQGCDPDGVSYSTIVEGL 448
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 168/299 (56%), Gaps = 7/299 (2%)
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKK 247
PP+ T+ ++ G+ K G + +++ + M ++PN+++YN ++ G CK EA++
Sbjct: 7 PPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEE 66
Query: 248 CMNEMMNRGCR--PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M++RG R P+ +TY+ ++ G C G+V+E++ L+ ++ G + + + ++
Sbjct: 67 LVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVAS 126
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + +A+ L ++ A P + ++ +I+G C+ + A SLL++M A G+K
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKAD 186
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V ++N + L + G L A LL++M C P+ V+Y++ + GLC + G++ D ++
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS-GKVLDAHQVL 245
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
++M S H+ + Y+ +L G C+ G ++ +++ +M + G L + + T VVD L
Sbjct: 246 EQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST-VVDGL 303
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 169/345 (48%), Gaps = 41/345 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+L+ + E + ++ P+V +Y ++ G CK+ A+++
Sbjct: 12 TFNALVNGFSKQGRPGDCERLLETMAARDI-QPNVVSYNGLLEGLCKLERWHEAEELVRD 70
Query: 220 MTVK-----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M + P+++ Y+T+++G+CK G++EE+++ + E+++RG RP+ L Y ++ LC +
Sbjct: 71 MISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKS 130
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+ EA L+ +M G + T +++ G C + A L+ + + + DV +Y
Sbjct: 131 ARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTY 190
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++G CK G+ EA LL+ M+A G P V ++++ L ++G++ A +L+QM
Sbjct: 191 NTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRD 250
Query: 395 MDCLPNFVSYNTIICGLC--------------MAK---------------------GRMQ 419
PN V+YNTI+ GLC MA GR Q
Sbjct: 251 SHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ +++ M R+G D YS L+ G C+ G +E ++ EM
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 150/295 (50%), Gaps = 14/295 (4%)
Query: 107 LISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLG 166
L +AAS +K + + L KA G ++ A + K + +Y+S +
Sbjct: 175 LQKMAASGVKADVVTYNTLMDGLCKA----GRLQEAEQLLERMKASGCAPDVVAYSSFVY 230
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP-- 224
L + + A + Q+ +++ P+V TY T++ G CK G I+ A ++ + M
Sbjct: 231 GLCKSGKVLDAHQVLEQM-RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGC 289
Query: 225 --NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
N++ Y+T+++G CK G +EA+ M M GCRP+ +TY++++ GLC G+++EA
Sbjct: 290 GLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVE 349
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN-----PDVKSYEVV 337
+ +M + G K N T+ S++ GLC G+ +A + + P V +Y +
Sbjct: 350 AVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNAL 409
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
I G CK G+ D+A+ + MR++G P S++ + L +G +A ++L ++
Sbjct: 410 IGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 140/276 (50%), Gaps = 12/276 (4%)
Query: 95 YTAITDVLLSHSLISIAASLL---KNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y + D L + A LL K S D S + G V A Q +
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMR 249
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +YN++L L + I A E Q+ + +V Y+T++ G CK+G
Sbjct: 250 DSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRT 309
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ V + M +P+++ Y++++NG CK G++EEA + + EM GC+PN +TY ++
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKD-----NVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
++GLC GR+ EA+ ++ +M G +VST+ +++ GLC G+ D A+ + + +
Sbjct: 370 VHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRM 429
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+PD SY ++ G + G++ +A +L E+R
Sbjct: 430 RSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 120/214 (56%), Gaps = 4/214 (1%)
Query: 253 MNR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+R GC PN +T+NA++ G GR + + L+ M + NV ++ +L+GLC + +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 312 FDQAVGYLRNVME--ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ +A +R+++ PD+ +Y +++G+CK GK +E+ LLKE+ +RGL+P +
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
V L ++ L A+ LL++M + C P +++NT+I G C K ++ + L+ +M
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREK-NLEMADSLLQKMA 179
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
SG D Y+ L+ G C+ G ++ Q+ M
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 165/306 (53%), Gaps = 5/306 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S N ++ L + + A + +++ V PDV TY ++ G+C ++ A KVFD+
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGV-EPDVVTYAALMDGHCLRSEMDEAVKVFDM 291
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M N+++YNT+ING+CK +++A EM + PN +TY+ +I+GLC GR
Sbjct: 292 MVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGR 351
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ +A L +M G N+ T+ +L LC + +A+ L+ + +N++PDV+ Y +
Sbjct: 352 LQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNI 411
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
I+G C+ G + A L + RGL+P V++ N + R L + G LD A L ++M +
Sbjct: 412 AIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENG 471
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
CL N +YNTI GL + + L++ M+ G + D + + L+K ++G ++V
Sbjct: 472 CLRNGCTYNTITQGL-LQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSV 530
Query: 457 MQIAHE 462
QI E
Sbjct: 531 KQILCE 536
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 179/359 (49%), Gaps = 5/359 (1%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+S+ A +LK ++ + L++ G + A+ F + + +Y +L+
Sbjct: 111 LSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNG 170
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
L + + A F +++ + + PD+ TY ++I C + ++ + + M + P
Sbjct: 171 LCKDRQLTEALNLFSEMIAKGI-SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMP 229
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N+++ N +++ CK+G++ EA ++ M+ G P+ +TY A++ G C+ +DEA +
Sbjct: 230 NVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVF 289
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M NG NV ++ +++ G C + + D+A+ + + P+ +Y +I+G C +
Sbjct: 290 DMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHV 349
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G+ +AI+L EM A G P + +++ + L +N L A+ LLK + + P+ Y
Sbjct: 350 GRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVY 409
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
N I G+C A G ++ DL + G D ++ +++G C+ G ++ ++ EM
Sbjct: 410 NIAIDGMCRA-GDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREM 467
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 152/311 (48%), Gaps = 5/311 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM---GMIENAKKV 216
S N+ + N++ A FH+++ + PP + + ++ KM + + K
Sbjct: 23 SQNNFQSKSLHFNTLDDALSSFHRMLHMHP-PPPIFEFAKLLTSIAKMKHYSTVLSLSKK 81
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
D + P++ +IN FC ++ A + +++ G +P+ T+ ++ GLC+ G+
Sbjct: 82 MDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGK 141
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA + KM GF+ NV T+ +++ GLC + +A+ ++ ++PD+ +Y
Sbjct: 142 IGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNS 201
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ C + + +LL EM + P V S N V L + G++ A ++ M Q
Sbjct: 202 LIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGG 261
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+Y ++ G C+ + M + + D M+R+G + Y+ L+ GYC+ ++
Sbjct: 262 VEPDVVTYAALMDGHCL-RSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKA 320
Query: 457 MQIAHEMVTKK 467
M + EM ++
Sbjct: 321 MYLFEEMCRQE 331
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 180/338 (53%), Gaps = 5/338 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G +AA+ + + + YN+++ L + + A + +++ +
Sbjct: 175 LINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKR 234
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+ P DV TYTT+I G +G ++ A +F+ M +KP++ +N +++G CK+GE+++A
Sbjct: 235 IFP-DVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKA 293
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + M+ +G N +TYN+++ G + + ++A + M G +V ++ M+ G
Sbjct: 294 RNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMING 353
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC D+AV + + +M P+ +Y +I+G K G+ +A L+ EM RG
Sbjct: 354 LCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPAD 413
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V +++++ L +N ++D+AI L+ ++ PN +Y ++ GLC GR++D + +
Sbjct: 414 VITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLC-KNGRLKDAQAVY 472
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ G++LD MY+ ++ G C+EG + + + +M
Sbjct: 473 QDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKM 510
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 144/254 (56%), Gaps = 5/254 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ V A F+ + + V P DV +Y+ MI G CK M++ A +F
Sbjct: 311 TYNSLMDGYFLVKQENKATFVFNTMARRGVTP-DVQSYSIMINGLCKTKMVDEAVNLFKE 369
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN + YN++I+G K G + +A +NEM NRG + +TY++++ LC N +
Sbjct: 370 MHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQ 429
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A L+ K++ G + N+ T+ ++ GLC G+ A ++++ + DVK Y V
Sbjct: 430 VDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNV 489
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM-PQM 395
++NG CK G DEA+SL+ +M G P ++ + R L EN + D+A+ LL++M Q
Sbjct: 490 MVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
Query: 396 DCLPNFVSYNTIIC 409
+ + +S N+++C
Sbjct: 550 SAVGSNISSNSMLC 563
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 148/278 (53%), Gaps = 4/278 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G +K A+ F+Q +Y++N L+ L + +K A ++K+ V ++ T
Sbjct: 253 GRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGV-DSNIVT 311
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y +++ GY + A VF+ M V P++ +Y+ MING CK ++EA EM
Sbjct: 312 YNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMH 371
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
++ PN +TYN++I GL GR+ +A L+ +M G +V T+ S+L LC + D
Sbjct: 372 SKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVD 431
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ + + + + P++ +Y ++++G CK G+ +A ++ +++ +G V +N +
Sbjct: 432 KAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMV 491
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L + G D A+ L+ +M C+P+ V+Y T++ L
Sbjct: 492 NGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRAL 529
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 5/273 (1%)
Query: 178 EEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA---KKVFDVMTVKPNLLAYNTMIN 234
F H + N V P + + ++ K+ A K ++ ++P+L +N +IN
Sbjct: 49 SSFNHILHMRNPVQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILIN 107
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
FC G L A + ++ G P+ +T +I GLC+NG+V EA + GF
Sbjct: 108 CFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHL 167
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+ ++ +++ GLC G+ A+ LR + + P+V Y +I+ CK A L
Sbjct: 168 DQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLC 227
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
EM + + P V ++ + + G L A+ L QM + P+ ++N ++ GLC
Sbjct: 228 SEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLC-K 286
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+G M+ +++ MI+ G + + Y+ L+ GY
Sbjct: 287 EGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGY 319
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L L + F A+ + + + + PD+ ++ ++IN FC +G + A S+L ++ G
Sbjct: 70 ILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLG 129
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA---KGRM 418
P + + + L NG++ A+ + + VSY T+I GLC + +
Sbjct: 130 FHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAAL 189
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
Q + + +++ + MY+ ++ C++ V + + EM+ K+
Sbjct: 190 QVLRKIDGLLVQP----NVVMYNTIIDSLCKDKLVIHASDLCSEMIVKR 234
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Query: 344 IGKSDEAISLLKE-MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
I D+A+S + R +F FN + LV+ AI KQM P+
Sbjct: 41 IDNVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLF 100
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++N +I C G + ++ ++ + G + D + L+KG C G V + H+
Sbjct: 101 TFNILINCFCHL-GHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHF-HD 158
Query: 463 MVTKKG 468
V KG
Sbjct: 159 DVIAKG 164
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 209/448 (46%), Gaps = 53/448 (11%)
Query: 65 QTNPYHALFFFNWAS-NPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSN-KLS 122
+ NP AL F AS N + + + +HH A L+SH +S ++K
Sbjct: 23 EKNPLSALSLFESASRNKSHSAHVFHHILR-RLAADSRLVSH--VSRIVDIVKAQKCPCK 79
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEE 179
+ +IKAY A+ F + I C + SYN+LL V +N AE
Sbjct: 80 EDVALTVIKAYAKNKMSNKALDTFQNMQDI--FGCKPGVRSYNTLLNAFVELNEWDRAES 137
Query: 180 FFHQIVKENVVP----------------------------------PDVSTYTTMIRGYC 205
F +V P PDV +Y T+I G
Sbjct: 138 FSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMV 197
Query: 206 KMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR--PN 260
K+G + A KVFD M+V+ ++ YN +I+GF K G+ ++ K+ + E + + C PN
Sbjct: 198 KVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKE-IWERLVKDCSVYPN 256
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+TYN MI GLC GR DE+ + +M N + ++ T+ S++ GLC G D AV +
Sbjct: 257 VVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYK 316
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
++E+++ D ++ ++NGFC+ GK E+ L M + TV S+N + + L ENG
Sbjct: 317 EIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENG 375
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+++ AI + + + + C P +Y +I GLC GR+ + LD Y
Sbjct: 376 KVEEAISIWELLCKKGCRPESTTYGVLIHGLC-KNGRLNKALKIFKEAEDGPGKLDAYAY 434
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTKKG 468
S ++ G C+EG ++ + I ++M K+G
Sbjct: 435 SSMVDGLCKEGRMDEAISIVNQM-DKRG 461
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 165/308 (53%), Gaps = 4/308 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y+SL+ L +I A + +IV+ ++V D T+ M+ G+C+ G I+ + +++
Sbjct: 292 MFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVV-DAVTHNAMLNGFCRAGKIKESFELW 350
Query: 218 DVMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
VM + +++YN +I G + G++EEA + +GCRP TY +I+GLC NG
Sbjct: 351 MVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNG 410
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R+++A + + K + + SM+ GLC G+ D+A+ + + + D
Sbjct: 411 RLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCN 470
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+INGF + K ++AI+ +EM +G PT+ S+N + + L + A +K+M +
Sbjct: 471 PLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEK 530
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ P+ ++ + ++ GLC K +++ +L + + G D TMY+ L+ G C +E+
Sbjct: 531 EWKPDMITCSLLMDGLCQEK-KIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLED 589
Query: 456 VMQIAHEM 463
+Q+ M
Sbjct: 590 ALQLYSHM 597
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 172/342 (50%), Gaps = 8/342 (2%)
Query: 129 LIKAYGDRGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
++ + G +K + W K EN + SYN L+ L ++ A + + K+
Sbjct: 333 MLNGFCRAGKIKESFELWMVMGK--ENCQTVVSYNILIKGLFENGKVEEAISIWELLCKK 390
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEE 244
P+ +TY +I G CK G + A K+F P L AY++M++G CK+G ++E
Sbjct: 391 GC-RPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDE 449
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A +N+M RG + + N +I G ++++A +M G + ++ +++K
Sbjct: 450 AISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIK 509
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC +F +A +++ ++E PD+ + ++++G C+ K + A++L ++ +G KP
Sbjct: 510 GLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKP 569
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ +N + L +L+ A+ L M + C+PN V+ NT++ GL + + ++
Sbjct: 570 DITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRD-YEKASEI 628
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D +++ G + D Y+ +KG C + + ++ ++ + +
Sbjct: 629 WDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNR 670
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 151/329 (45%), Gaps = 13/329 (3%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
NI+ K ++E A+ + P + Y + L + ++ A +
Sbjct: 365 NILIKGLFENGKVEEAISIWELLCKKGCRPE-----STTYGVLIHGLCKNGRLNKALKIF 419
Query: 116 KNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
K + KL + S ++ G + AI +Q + + N L+ VR
Sbjct: 420 KEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRA 479
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+ ++ A FF ++ + P VS Y T+I+G CK A M KP+++
Sbjct: 480 SKLEDAINFFREMECKGCSPTIVS-YNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMIT 538
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
+ +++G C++ ++E A + +++G +P+ YN +++GLC ++++A L + M+
Sbjct: 539 CSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMK 598
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ N+ T ++++GL V +++A +++ ++PD+ SY + I G C +
Sbjct: 599 RSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRIS 658
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILV 377
+AI L + RG+ PT ++N + R V
Sbjct: 659 DAIEFLNDALNRGILPTAVTWNILVRAAV 687
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 137/305 (44%), Gaps = 6/305 (1%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
ISI L K + LI G + A+ F +A+ Y+Y+S++
Sbjct: 381 ISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDG 440
Query: 168 LVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
L + + A +Q+ K + P V +I G+ + +E+A F M K
Sbjct: 441 LCKEGRMDEAISIVNQMDKRGYKLDPHVCN--PLINGFVRASKLEDAINFFREMECKGCS 498
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P +++YNT+I G CK EA + EM+ + +P+ +T + ++ GLC +++ A L
Sbjct: 499 PTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNL 558
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ GFK +++ + ++ GLC V K + A+ ++ + P++ + ++ G K
Sbjct: 559 WQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYK 618
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+ ++A + + GL P + S+N + L + AI L LP V+
Sbjct: 619 VRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVT 678
Query: 404 YNTII 408
+N ++
Sbjct: 679 WNILV 683
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 172/336 (51%), Gaps = 8/336 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + L+K D + A+ H G + SYN++L + A
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYST 223
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+H+++ ++P DV TY+++I CK ++ A +V + M V P+ + YN++++G+C
Sbjct: 224 YHEMLDRGILP-DVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 282
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G+ +EA + +M + G PN +TY++++ LC NGR EA+ + M G + +++
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T++++L+G G + L ++ + PD + ++I + K K D+A+ + +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
R GL P V + V +L ++G +D A+L +QM PN + Y ++I GLC +
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCD-K 461
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
E+L+ M+ G L+ ++ ++ +C+EG V
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 497
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 163/344 (47%), Gaps = 40/344 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+S++ L + ++ A E + +VK V+P D TY +++ GYC G + A
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP-DCMTYNSILHGYCSSGQPKEAIGTLKK 296
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING- 275
M V+PN++ Y++++N CK G EA+K + M RG P+ TY ++ G G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 276 ----------------------------------RVDEAKMLMAKMRLNGFKDNVSTHKS 301
+VD+A ++ +KMR +G NV + +
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ LC G D A+ Y +++ + P++ Y +I+G C K D+A L+ EM RG
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ FN++ + G + + L M ++ P+ ++YNT+I G C+A G+M +
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA-GKMDEA 535
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
L+ M+ G D Y L+ GYC +++ + + EMV+
Sbjct: 536 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 579
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 163/314 (51%), Gaps = 6/314 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKE--NVVPPDVSTYTTMIRGYCKMGMIENAKK 215
++SYN+LL L N + A E H + + PPDV +Y T++ G+ K G + A
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222
Query: 216 VFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ M + P+++ Y+++I CK +++A + +N M+ G P+ +TYN++++G C
Sbjct: 223 TYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 282
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+G+ EA + KMR +G + NV T+ S++ LC G+ +A ++ + + PD+
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y ++ G+ G E +LL M G++P FN + + ++D+A+L+ +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
Q PN V Y T+I LC + G + D ++MI G + +Y+ L+ G C
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKS-GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 453 VENVMQIAHEMVTK 466
+ ++ EM+ +
Sbjct: 462 WDKAEELILEMLDR 475
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 188/377 (49%), Gaps = 8/377 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P+ Y Y ++ H+L+ + +++N + + LI AY + V A
Sbjct: 339 PDIATYRTLLQGYATKGALVEMHALLDL---MVRNGIQPDHHVFNILICAYAKQEKVDQA 395
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + +Q + Y +++ VL + S+ A +F Q++ E + P ++ YT++I
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP-NIIVYTSLIH 454
Query: 203 GYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
G C + A+++ M + N + +N++I+ CK+G + E++K + M+ G +P
Sbjct: 455 GLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 514
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TYN +I G C+ G++DEA L+A M G K ++ T+ +++ G C V + D A+
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 574
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ ++ + ++P++ +Y +++ G ++ A L + G + + ++N + L +N
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
D A+ + + + D ++N +I G + GRM + +DL +G D
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMI-GALLKCGRMDEAKDLFAAHSANGLVPDVRT 693
Query: 440 YSCLLKGYCEEGNVENV 456
YS + + E+G++E +
Sbjct: 694 YSLMAENLIEQGSLEEL 710
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 167/369 (45%), Gaps = 40/369 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++ Y G K AI + + + +Y+SL+ L + A + F + K
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ PD++TY T+++GY G + + D+M ++P+ +N +I + K+ ++++A
Sbjct: 337 L-EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++M G PN + Y +I LC +G VD+A + +M G N+ + S++ G
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455
Query: 306 LCVVGKFDQAVGYLRNVMEANM-----------------------------------NPD 330
LC K+D+A + +++ + PD
Sbjct: 456 LCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 515
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ +Y +I+G C GK DEA LL M + G+KP + ++ + +D A+ L K
Sbjct: 516 IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFK 575
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M PN ++YN I+ GL + R ++L + +SG L+ + Y+ +L G C+
Sbjct: 576 EMVSSGVSPNIITYNIILQGLFHTR-RTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634
Query: 451 GNVENVMQI 459
+ +++
Sbjct: 635 NLTDEALRM 643
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 170/363 (46%), Gaps = 19/363 (5%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
NI+ +Q A+ F+ NPN CY + DVL + A
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQHGLNPN-----VVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 116 KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQI-----ENGACLYS--YNSLLGVL 168
+ ++ D ++ I Y + + +A+++ + G CL + +NS++
Sbjct: 435 E---QMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSH 491
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPN 225
+ + +E+ F +V+ V PD+ TY T+I G C G ++ A K+ M VKP+
Sbjct: 492 CKEGRVIESEKLFDLMVRIGV-KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++ Y T+ING+C+ +++A EM++ G PN +TYN ++ GL R AK L
Sbjct: 551 IVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV 610
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+ +G + +ST+ +L GLC D+A+ +N+ ++ + +++ ++I K G
Sbjct: 611 SITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCG 670
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ DEA L A GL P V +++ + L+E G L+ L M + C + N
Sbjct: 671 RMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLN 730
Query: 406 TII 408
+I+
Sbjct: 731 SIV 733
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 21/333 (6%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRG 203
F + + GA +Y N L + R +S A ++++ + V P V TY +I
Sbjct: 43 FDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGC 101
Query: 204 YCKMGMIENA--------KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK-CMNEMMN 254
C+ G ++ KK F V + + + ++ G C +A + M
Sbjct: 102 CCRAGRLDLGFAALGNVVKKGFRV-----DAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKML---MAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
GC P+ +YN ++ GLC R EA L MA R G +V ++ ++L G G
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+A +++ + PDV +Y +I CK D+A+ +L M G+ P ++N+
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ +G+ AI LK+M PN V+Y++++ LC GR + + D M +
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLC-KNGRSTEARKIFDSMTKR 335
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G D Y LL+GY +G + + + MV
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 73/146 (50%), Gaps = 5/146 (3%)
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P V +Y ++I C+ G+ D + L + +G + +F + + L +
Sbjct: 86 GKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSD 145
Query: 385 AI-LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR---SGHNLDFTMY 440
A+ ++L++M ++ C+P+ SYN ++ GLC + R Q+ +L+ M G D Y
Sbjct: 146 AMDIVLRRMTELGCIPDVFSYNNLLKGLC-DENRSQEALELLHMMADDRGGGSPPDVVSY 204
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +L G+ +EG+ + HEM+ +
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDR 230
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 4/194 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y + A+ F + + +YN +L L A+E + I K
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
++STY ++ G CK + + A ++F + ++ +N MI K G ++EA
Sbjct: 617 T-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 675
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K G P+ TY+ M L G ++E L M NG + S+++
Sbjct: 676 KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRK 735
Query: 306 LCVVGKFDQAVGYL 319
L G +A YL
Sbjct: 736 LLQRGDITRAGTYL 749
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Query: 350 AISLLKEMRARG---LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
A+S M G + PTV ++ + G LD L + + + +++
Sbjct: 73 AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132
Query: 407 IICGLCMAKGRMQDVEDLV-DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
++ GLC K R D D+V RM G D Y+ LLKG C+E + +++ H M
Sbjct: 133 LLKGLCADK-RTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMAD 191
Query: 466 KKG 468
+G
Sbjct: 192 DRG 194
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 4/155 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN +L L + N A F + ++ + T+ MI K G ++ AK +F
Sbjct: 621 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDL-QLETRTFNIMIGALLKCGRMDEAKDLF 679
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ P++ Y+ M ++G LEE M GC + N+++ L
Sbjct: 680 AAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQR 739
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
G + A + + F ST +L+ +V
Sbjct: 740 GDITRAGTYLFMIDEKHFSLEASTASFLLESSPIV 774
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 174/312 (55%), Gaps = 9/312 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA-----K 214
++ +L+ V SI+ A ++ + P V T +I GYCK+G + +A +
Sbjct: 233 TFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSV-TVNVLINGYCKLGRVGDALGYIQQ 291
Query: 215 KVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
++ D +P+ + ++T +NG C+ G ++ A K + M+ GC P+ TY+ +I LC N
Sbjct: 292 EIAD--GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNN 349
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G ++EAK ++ +M +G + +T +++ LC + ++A+ R + ++P+V ++
Sbjct: 350 GELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTF 409
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++IN CK+G A+ L +EM++ G P ++N + L +G+L +A+ LLK+M
Sbjct: 410 NILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEV 469
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C + V+YNTII GLC + R+++ E++ D+M +G + ++ L+ G C ++
Sbjct: 470 SGCPQSTVTYNTIIDGLCKRR-RIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERID 528
Query: 455 NVMQIAHEMVTK 466
+ ++ +M+++
Sbjct: 529 DAAELVDQMISE 540
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 160/314 (50%), Gaps = 5/314 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N L+ L +V LA F ++ K + PD TY +I C G + A +
Sbjct: 406 VYTFNILINALCKVGDPHLAVRLFEEM-KSSGCTPDEVTYNILIDNLCSSGKLAKALDLL 464
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V + + YNT+I+G CK+ +EEA++ ++M G N +T+N +I GLC
Sbjct: 465 KEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNA 524
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+D+A L+ +M G + N T+ S+L C G +A L+ + DV +Y
Sbjct: 525 ERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTY 584
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ING CK ++ A+ LL+ MR +G+KPT ++N V + L A+ L ++M +
Sbjct: 585 ATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTE 644
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ P+ +Y + GLC G +++ D + M +G +F+ + L +G G ++
Sbjct: 645 VGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLG-MD 703
Query: 455 NVMQIAHEMVTKKG 468
+ + A E++ +K
Sbjct: 704 DYLIRAIELIVEKA 717
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 158/314 (50%), Gaps = 5/314 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y++++ L ++ A+ +Q+V +P D +T+ T+I C +E A +
Sbjct: 336 VYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLP-DTTTFNTLIVALCTENQLEEALDLA 394
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+TVK PN+ +N +IN CK G+ A + EM + GC P+E+TYN +I LC +
Sbjct: 395 RELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSS 454
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++ +A L+ +M ++G + T+ +++ GLC + ++A + + + ++
Sbjct: 455 GKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITF 514
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G C + D+A L+ +M + GL+P ++N++ + G + +A +L+ M
Sbjct: 515 NTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTA 574
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ V+Y T+I GLC A+ R Q L+ M G Y+ +++ N
Sbjct: 575 NGFEVDVVTYATLINGLCKAR-RTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGR 633
Query: 455 NVMQIAHEMVTKKG 468
+ + + EM G
Sbjct: 634 DALSLFREMTEVGG 647
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 131/258 (50%), Gaps = 1/258 (0%)
Query: 206 KMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
K+ ++E+A ++P+++ +NT+I+ C+ + A + EM + P+E T+
Sbjct: 176 KIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFT 235
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
++ G G ++ A L A+M G T ++ G C +G+ A+GY++ +
Sbjct: 236 TLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIAD 295
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
PD ++ +NG C+ G D A+ +L M G +P V++++ V L NGEL+ A
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEA 355
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
++ QM CLP+ ++NT+I LC + ++++ DL + G + + ++ L+
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALC-TENQLEEALDLARELTVKGLSPNVYTFNILIN 414
Query: 446 GYCEEGNVENVMQIAHEM 463
C+ G+ +++ EM
Sbjct: 415 ALCKVGDPHLAVRLFEEM 432
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 139/272 (51%), Gaps = 5/272 (1%)
Query: 199 TMIRGYCKMGMIENAKKV----FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+ I Y ++ + ++A + D+ V+ N YN ++ + +++ + EM +
Sbjct: 130 SFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSS 189
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G P+ +T+N +I LC + A +++ +M + +T ++++G G +
Sbjct: 190 QGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEA 249
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+ + E +P + V+ING+CK+G+ +A+ +++ A G +P +F+
Sbjct: 250 ALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVN 309
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L +NG +D A+ +L M Q C P+ +Y+T+I LC G +++ + +V++M+ SG
Sbjct: 310 GLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLC-NNGELEEAKGIVNQMVDSGCL 368
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D T ++ L+ C E +E + +A E+ K
Sbjct: 369 PDTTTFNTLIVALCTENQLEEALDLARELTVK 400
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 115/273 (42%), Gaps = 39/273 (14%)
Query: 232 MINGFCKKGELEEAKKCMNEMMNR--GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
++ ++ + E A + +N + R G P+ Y +I L G D K+L+ +MR
Sbjct: 59 LVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRR 118
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME------------------------- 324
G + + +S + + FD A + N ++
Sbjct: 119 EGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIK 178
Query: 325 -----------ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ PDV ++ VI+ C+ ++ A+ +L+EM + + P +F +
Sbjct: 179 LLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLM 238
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
VE G ++ A+ L +M +M C P V+ N +I G C GR+ D + + I G
Sbjct: 239 EGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKL-GRVGDALGYIQQEIADGF 297
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D +S + G C+ G+V++ +++ M+ +
Sbjct: 298 EPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQE 330
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 190/358 (53%), Gaps = 6/358 (1%)
Query: 110 IAASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
AA L + SD ++ S LI AY + G ++ AI + ++ + + +L +
Sbjct: 41 FAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHM 100
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPN 225
+++ KL F+ +I+ E P + + ++ +CK G I A+ VF+ +T ++P+
Sbjct: 101 MKLKYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPS 159
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++++NT++NG+ + G+L+E + + M G +P+ TY+ +I GLC ++D+A L
Sbjct: 160 VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 219
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M G N T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G
Sbjct: 220 EMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 279
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+A L+ EM +GLKP ++ + + G+L+ A K+M Q + + V+Y
Sbjct: 280 DLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYT 339
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I GLC +GR D E ++ M+ +G D Y+ ++ +C++G+V ++ EM
Sbjct: 340 ALISGLC-QEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 159/291 (54%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F+ + + S+N+L+ +R+ L E F
Sbjct: 126 YFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGD--LDEGFRLK 183
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK +++A ++FD M K PN + + T+I+G CK
Sbjct: 184 SAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKS 243
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M + G K + T+
Sbjct: 244 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITY 303
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G + A + + +++ N+ D +Y +I+G C+ G+ +A +L+EM +
Sbjct: 304 TTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLS 363
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GLKP ++ + + G++ LLK+M + +P+ V+YN ++ G
Sbjct: 364 AGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 19/260 (7%)
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC------------------RPNELTYNA 266
L +Y TMI+ C L EAK + +++R R + ++
Sbjct: 1 TLDSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 60
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I +G + +A R + F T + +L+ + + F G+ ++E
Sbjct: 61 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECG 120
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ + ++++ FCK G A S+ + GL+P+V SFN + + G+LD
Sbjct: 121 YPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 180
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L M P+ +Y+ +I GLC + +M D +L D M+ G + ++ L+ G
Sbjct: 181 RLKSAMHASGVQPDVYTYSVLINGLC-KESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 239
Query: 447 YCEEGNVENVMQIAHEMVTK 466
+C+ G V+ M+I +M+++
Sbjct: 240 HCKSGRVDLAMEIYKQMLSQ 259
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 182/359 (50%), Gaps = 18/359 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N+L+ V + A+ +V + PDV TY ++I GY K G++ A +V M
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
KPN+ +Y +++GFCK G+++EA +NEM G +PN + +N +I C R+
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA + +M G K +V T S++ GLC V + A+ LR+++ + + +Y +
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
IN F + G+ EA L+ EM +G ++N++ + L GE+D+A L ++M +
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGL 589
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ +S N +I GLC + G +++ + M+ G D ++ L+ G C G +E+ +
Sbjct: 590 VPSSISCNILINGLCRS-GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 648
Query: 458 QIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVVIMERTVEDG 516
+ R L+ + V LM SW+ + FV+ ++++ +EDG
Sbjct: 649 TMF--------RKLQAEGIPPDTVTYNTLM------SWLCKGGFVYDACLLLDEGIEDG 693
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 147/255 (57%), Gaps = 4/255 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+N L+ + + I A E F ++ ++ PDV T+ ++I G C++ I++A +
Sbjct: 455 GFNCLISAFCKEHRIPEAVEIFREMPRKGC-KPDVYTFNSLISGLCEVDEIKHALWLLRD 513
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V N + YNT+IN F ++GE++EA+K +NEM+ +G +E+TYN++I GLC G
Sbjct: 514 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGE 573
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A+ L KM +G + + ++ GLC G ++AV + + ++ PD+ ++
Sbjct: 574 VDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 633
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING C+ G+ ++ +++ ++++A G+ P ++N + L + G + A LLL + +
Sbjct: 634 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDG 693
Query: 397 CLPNFVSYNTIICGL 411
+PN +++ ++ L
Sbjct: 694 FVPNDRTWSILLQSL 708
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 163/365 (44%), Gaps = 27/365 (7%)
Query: 41 ISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWAS--------------NPNPNPN 86
++ LD L + + I Y++L + W N PN
Sbjct: 358 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPN 417
Query: 87 KYHHTTPCYTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAA 142
Y YT + D I A +LL + K + + LI A+ + A
Sbjct: 418 VYS-----YTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 472
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + + +Y++NSL+ L V+ IK A ++ E VV V TY T+I
Sbjct: 473 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV-TYNTLIN 531
Query: 203 GYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
+ + G I+ A+K+ + M + +LL YN++I G C+ GE+++A+ +M+ G P
Sbjct: 532 AFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVP 591
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ ++ N +I GLC +G V+EA +M L G ++ T S++ GLC G+ + +
Sbjct: 592 SSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 651
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
R + + PD +Y +++ CK G +A LL E G P +++ + + LV
Sbjct: 652 RKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQ 711
Query: 380 GELDR 384
LDR
Sbjct: 712 ETLDR 716
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 168/390 (43%), Gaps = 49/390 (12%)
Query: 115 LKNS-NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
L+NS +K++ F + KL++ D W K + Y L+G L
Sbjct: 63 LRNSFHKITPFQLCKLLELPLDVSTSMELFSWTGSQKGYRHS--FDVYQVLIGKLGSNGE 120
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG--------MIE-------------- 211
K + Q+ E +V + S + +++R Y K G M+E
Sbjct: 121 FKTIDRLLMQMKDEGIVFKE-SLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSY 179
Query: 212 ----------NAKKV-----FDVMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
N KV +D+++ K P L + ++ C E++ A + +M
Sbjct: 180 NVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTK 239
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
GC PN + Y +I+ L RV+EA L+ +M L G + T ++ GLC + ++
Sbjct: 240 HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINE 299
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A + ++ PD +Y ++NG CKIG+ D A K++ R KPT FN +
Sbjct: 300 AAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPTSVIFNTLIH 355
Query: 375 ILVENGELDRAILLLKQM-PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
V +G LD A +L M +P+ +YN++I G KG + +++ M G
Sbjct: 356 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY-WKKGLVGLALEVLRDMRNKGC 414
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ Y+ L+ G+C+ G ++ + +EM
Sbjct: 415 KPNVYSYTILVDGFCKLGKIDEAYNLLNEM 444
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 8/195 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI A+ RG +K A ++ + G+ L +YNSL+ L R + A F ++++
Sbjct: 529 LINAFLRRGEIKEARKLVNE--MVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 586
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ +VP +S +I G C+ GM+E A + M ++ P+++ +N++ING C+ G +E
Sbjct: 587 DGLVPSSISC-NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 645
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+ ++ G P+ +TYN ++ LC G V +A +L+ + +GF N T +L
Sbjct: 646 DGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILL 705
Query: 304 KGLCVVGKFDQAVGY 318
+ L D+ Y
Sbjct: 706 QSLVPQETLDRRTFY 720
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 197/412 (47%), Gaps = 16/412 (3%)
Query: 64 EQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLIS----IAASLLKNSN 119
+Q A F + NPN++ YTA+ D + I I ++
Sbjct: 323 KQKRSKEAKLIFESMPSSGLNPNRF-----TYTALIDGFIKEGNIEEALRIKDEMITRGL 377
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
KL+ + +I G + A+ F++ ++YN L+ ++ + + A E
Sbjct: 378 KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACE 437
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
++ K + P TY+ +I G C ++ A +V D M VKPN+ Y T+I +
Sbjct: 438 LLAEM-KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAY 496
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
++ E A + + M+ G P+ YN +I GLC +V+EAKML+ M G K N
Sbjct: 497 VQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNA 556
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ + + G+ A Y ++++ + + P+ Y ++I G C +G + EA+S K
Sbjct: 557 HTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKC 616
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GL P + +++A+ L +NG+ A+ + + + +P+ YN++I G C +G
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFC-KEG 675
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLK--GYCEEGNVENVMQIAHEMVTK 466
++ L D M+ +G N + +Y+ L+ GYC+ GN+ ++ EM++K
Sbjct: 676 DIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISK 727
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 204/415 (49%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---NSNKLSDFFISKLI 130
FF+W+S+ P +Y H+ Y+ + L + LI A ++L+ + K + L+
Sbjct: 106 FFHWSSSKMSTP-QYLHS---YSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLV 161
Query: 131 KAYGDRGNVKAAIF-----------WFHQAKQ-----IENG--ACLYSYNSLLGVLVRVN 172
+ Y + G +F + ++A I G L N+L+ L++ N
Sbjct: 162 RCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKAN 221
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--VKPNLLAYN 230
+ L + + +V+ +VP DV TYT +I+ +CK+G + K V M KPNL YN
Sbjct: 222 MMGLFWKVYGSMVEAKIVP-DVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYN 280
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
I G C+ G ++EA + MM +G P+ TY ++ G C R EAK++ M +
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G N T+ +++ G G ++A+ ++ + +V +Y +I G K G+ +A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+SL EM G++P +++N + +++ ++ +A LL +M P+ +Y+ +I G
Sbjct: 401 MSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
LC + +Q +++D+MIR+G + MY L+K Y +E E +++ M+
Sbjct: 461 LCHS-SDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA 514
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 175/377 (46%), Gaps = 39/377 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +IKA+ G+V + ++ E L++YN+ +G L + ++ A E +++
Sbjct: 246 TNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEV-KKLMM 303
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
E + PD TYT ++ G+CK + AK +F+ M + PN Y +I+GF K+G +E
Sbjct: 304 EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIE 363
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +EM+ RG + N +TYNAMI G+ G + +A L +M + G + + T+ ++
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLI 423
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G +A L + + P +Y V+I+G C +A +L +M G+K
Sbjct: 424 DGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK 483
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-------- 415
P VF + + + V+ + AI LLK M LP+ YN +I GLC AK
Sbjct: 484 PNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKML 543
Query: 416 --------------------------GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
G +Q E M+ SG + +Y+ L+KG+C+
Sbjct: 544 LVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCD 603
Query: 450 EGNVENVMQIAHEMVTK 466
GN + M+ K
Sbjct: 604 VGNTVEALSTFKCMLEK 620
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 170/342 (49%), Gaps = 12/342 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LIK + D GN A+ F +E G + +Y++++ L + K A F + +K
Sbjct: 597 LIKGHCDVGNTVEALSTFKC--MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMIN--GFCKKGE 241
VVP DV Y ++I G+CK G IE A +++D M + PN++ YNT+IN G+CK G
Sbjct: 655 TGVVP-DVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGN 713
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L EA K +EM+++G P+ Y +I G G +++A L + + ++S S
Sbjct: 714 LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNS 772
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ C GK +A ++++ + P++ +Y ++I+ + K +EA L +M R
Sbjct: 773 LIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRN 832
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P ++ ++ + G + I L K M + ++Y + C +G+ +
Sbjct: 833 IIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYC-KEGKSLEA 891
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L+++ + G L+ ++ L+ C+E + V+++ EM
Sbjct: 892 LKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 933
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 5/278 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCM 249
+++ + I + +G + A VF + P L+ N ++ K + K
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
M+ P+ TY +I C G V + KM++++M K N+ T+ + + GLC
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQT 289
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G D+A+ + +ME + PD +Y ++++GFCK +S EA + + M + GL P F++
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
A+ ++ G ++ A+ + +M N V+YN +I G+ A G M L + M+
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKA-GEMAKAMSLFNEML 408
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+G D Y+ L+ GY + ++ ++ EM +K
Sbjct: 409 MAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 145/324 (44%), Gaps = 40/324 (12%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I + G K A+ F + + ++ YNSL+ + I+ A + + +++
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML- 688
Query: 187 ENVVPPDVSTYTTMIR--GYCKMGMIENAKKVFDVMTVKP-------------------- 224
N + P++ Y T+I GYCK G + A K+FD M K
Sbjct: 689 HNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 748
Query: 225 -----------------NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+L A+N++I+ FCK G++ EA++ ++M+++ PN +TY +
Sbjct: 749 LEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTIL 808
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I ++EA+ L M N T+ S+L +G + + +++ +
Sbjct: 809 IDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGI 868
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
D +Y V+ + +CK GKS EA+ LL + G+K F+A+ L + ++ +
Sbjct: 869 ACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLE 928
Query: 388 LLKQMPQMDCLPNFVSYNTIICGL 411
LL +M + + + + NT++ G
Sbjct: 929 LLSEMGKEELSLSSKTCNTLLLGF 952
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 28/328 (8%)
Query: 98 ITDVLLSHSLIS-------------IAASLLKNSNKLSDFFISKLIKAYG--DRGNVKAA 142
+ DV L +SLIS + +L N + + LI YG GN+ A
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEA 717
Query: 143 IFWFHQ--AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
F + +K I Y Y L+ + +++ A FH+ +++V +S + ++
Sbjct: 718 FKLFDEMISKGISPDG--YIYCILIDGCGKEGNLEKALSLFHEAQQKSV--GSLSAFNSL 773
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I +CK G + A+++FD M K PN++ Y +I+ + K +EEA++ +M R
Sbjct: 774 IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 833
Query: 258 RPNELTYNAMIYGLCINGRVDEAKM--LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
PN LTY +++ L N + KM L M G + + M C GK +A
Sbjct: 834 IPNTLTYTSLL--LSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEA 891
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ L + + + ++ +I CK + + LL EM L + + N +
Sbjct: 892 LKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLG 951
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVS 403
++G D A +L M ++ +P +S
Sbjct: 952 FYKSGNEDEASKVLGVMQRLGWVPTSLS 979
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 219/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + IL+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGILIENFCKAGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNLMIEYLC-NNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN++ + M+
Sbjct: 301 HCKSGNLDAAADVLKAMI 318
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNLMIEYLCNNGQASKAETLVRQLMKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 176/347 (50%), Gaps = 13/347 (3%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFH 182
IS L KA R KAA+ + ++NGA ++NSLL A F
Sbjct: 244 IISALSKA---RAMDKAAVVL---VRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFK 297
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKK 239
++ ++ V PDV TY T++ CK G A+K+FD M KPN Y T+++G+ +
Sbjct: 298 RMCRDGV-EPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATE 356
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G L + ++ M+ G +P+ +N +I +G+VD+A +L +KMR G + T+
Sbjct: 357 GSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTY 416
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ LC+VGK D A+ ++ + PD + +I+G C K D+A L EM
Sbjct: 417 GIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIG 476
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RG+ P FN + L + G + RA + M ++D + ++YNT+I G C+ G++
Sbjct: 477 RGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCL-HGKVD 535
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ L++ M+ G + Y+ ++ GYC+ G +E+ + +M +K
Sbjct: 536 EAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASK 582
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 173/369 (46%), Gaps = 40/369 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G AI F + + +++YN+L+G L + A + F +VK
Sbjct: 279 LLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRG 338
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P+ +TY T++ GY G + + D+M ++P+ +N +I + K G++++A
Sbjct: 339 H-KPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDA 397
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++M +G P+ +TY ++ LC+ G+VD+A ++ G + ++++ G
Sbjct: 398 MLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHG 457
Query: 306 LCVVGKFDQA-------------------------------VGYLRNVME----ANMNPD 330
LC K+D+A V +N+ + ++ D
Sbjct: 458 LCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRD 517
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V +Y +I+G+C GK DEA LL+ M G+KP ++N + +NG ++ A L +
Sbjct: 518 VITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFR 577
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
QM P V+Y+TI+ GL A+ R ++L MI+SG D Y+ +L G C+
Sbjct: 578 QMASKGVNPGIVTYSTILQGLFQAR-RTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQN 636
Query: 451 GNVENVMQI 459
++ ++I
Sbjct: 637 NCTDDALRI 645
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 162/317 (51%), Gaps = 9/317 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVV----PPDVSTYTTMIRGYCKMG-MIEN 212
++SY LL L N + A H ++ + PPDV +Y T+I G + G ++
Sbjct: 162 VFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDT 221
Query: 213 AKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
A +FD M + P+++ YN++I+ K +++A + M+ G PN +T+N++++
Sbjct: 222 AYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLH 281
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G C +G+ ++A + +M +G + +V T+ +++ LC G+ +A ++++ P
Sbjct: 282 GYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKP 341
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+ +Y +++G+ G + LL M G++P + FN + ++G++D A+LL
Sbjct: 342 NSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLF 401
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+M + P+ V+Y ++ LCM G++ D R+I G D ++ L+ G C
Sbjct: 402 SKMRRQGLNPDTVTYGIVMDALCMV-GKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCA 460
Query: 450 EGNVENVMQIAHEMVTK 466
+ ++A EM+ +
Sbjct: 461 RDKWDKAEELAVEMIGR 477
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 139/262 (53%), Gaps = 5/262 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N+LL L + + A+ F +V+ +V DV TY T+I GYC G ++ A K+ + M
Sbjct: 486 FNTLLNHLCKEGMVARAKNIFDLMVRVDV-QRDVITYNTLIDGYCLHGKVDEAAKLLEGM 544
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
VKPN + YNTMING+CK G +E+A +M ++G P +TY+ ++ GL R
Sbjct: 545 VLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRT 604
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
AK L M +G K ++ T+ +L GLC D A+ +N+ + + + +++ ++
Sbjct: 605 AAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIM 664
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ K G+ DEA L + ARGL P V ++ + + L+E G L+ L + + C
Sbjct: 665 IDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGC 724
Query: 398 LPNFVSYNTIICGLCMAKGRMQ 419
N N ++ G + KG ++
Sbjct: 725 TANSRMLNALV-GKLLQKGEVR 745
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 172/372 (46%), Gaps = 8/372 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
PN Y Y ++ H L+ + +++N + + + LI Y G V A
Sbjct: 341 PNSATYGTLLHGYATEGSLVKMHHLLDM---MVRNGIQPDHYIFNILIGTYTKHGKVDDA 397
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + ++ +Y ++ L V + A F +++ E + P D + +I
Sbjct: 398 MLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTP-DAVVFRNLIH 456
Query: 203 GYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
G C + A+++ M + PN + +NT++N CK+G + AK + M+ +
Sbjct: 457 GLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQR 516
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TYN +I G C++G+VDEA L+ M L+G K N T+ +M+ G C G+ + A
Sbjct: 517 DVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLF 576
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
R + +NP + +Y ++ G + ++ A L M G+K + ++N + L +N
Sbjct: 577 RQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQN 636
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
D A+ + + + +D ++N +I L + GR + +DL ++ G +
Sbjct: 637 NCTDDALRIFQNLYLIDFHLENRTFNIMIDAL-LKGGRHDEAKDLFASLLARGLVPNVVT 695
Query: 440 YSCLLKGYCEEG 451
Y ++K E+G
Sbjct: 696 YWLMMKSLIEQG 707
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 11/285 (3%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
VPP++ TY+ +I ++G ++ A + + ++ ++ C K EA
Sbjct: 87 VPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAM 146
Query: 247 K-CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA-----KMLMAKMRLNGFKDNVSTHK 300
+ M GC PN +Y ++ GLC R +A M++A G+ +V ++
Sbjct: 147 DIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYN 206
Query: 301 SMLKGLCVVGK-FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ GL G+ D A +++ ++PDV +Y +I+ K D+A +L M
Sbjct: 207 TVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVK 266
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G P + N++ +G+ + AI + K+M + P+ +YNT++ LC GR
Sbjct: 267 NGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLC-KNGRSM 325
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ + D M++ GH + Y LL GY EG++ + + MV
Sbjct: 326 EARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMV 370
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 118/269 (43%), Gaps = 9/269 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y + D H + AA LL+ + K ++ + +I Y G ++ A F Q
Sbjct: 521 YNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMA 580
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ +Y+++L L + A+E + ++K + D+ TY ++ G C+
Sbjct: 581 SKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGI-KFDIGTYNIILLGLCQNNCT 639
Query: 211 ENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
++A ++F + + L +N MI+ K G +EAK ++ RG PN +TY M
Sbjct: 640 DDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLM 699
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ L G ++E L + NG N +++ L G+ +A YL + E N
Sbjct: 700 MKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNF 759
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKE 356
+ + + E ++ GK D+ I+ + E
Sbjct: 760 SLEASTAESLVL-LVSSGKYDQHINAIPE 787
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 202/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASSVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++D+A L +M N N
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 484
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 220/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG +G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----VRLSVPTEAGHYGVLIENFCKAGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 XFELLKIMLRRK 433
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN++ + MV
Sbjct: 301 HCKSGNLDAAADVLKAMV 318
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++ ++ +
Sbjct: 371 AYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDP--TALNTLIRGHSQEGSPDSXFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 172/336 (51%), Gaps = 8/336 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + L+K D + A+ H G + SYN++L + A
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYST 223
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+H+++ ++P DV TY+++I CK ++ A +V + M V P+ + YN++++G+C
Sbjct: 224 YHEMLDRGILP-DVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 282
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G+ +EA + +M + G PN +TY++++ LC NGR EA+ + M G + +++
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T++++L+G G + L ++ + PD + ++I + K K D+A+ + +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
R GL P V + V +L ++G +D A+L +QM PN + Y ++I GLC +
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCD-K 461
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
E+L+ M+ G L+ ++ ++ +C+EG V
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 497
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 163/344 (47%), Gaps = 40/344 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+S++ L + ++ A E + +VK N V PD TY +++ GYC G + A
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVK-NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING- 275
M V+PN++ Y++++N CK G EA+K + M RG P+ TY ++ G G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 276 ----------------------------------RVDEAKMLMAKMRLNGFKDNVSTHKS 301
+VD+A ++ +KMR +G NV + +
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ LC G D A+ Y +++ + P++ Y +I+G C K D+A L+ EM RG
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ FN++ + G + + L M ++ P+ ++YNT+I G C+A G+M +
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA-GKMDEA 535
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
L+ M+ G D Y L+ GYC +++ + + EMV+
Sbjct: 536 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 579
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 163/314 (51%), Gaps = 6/314 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKE--NVVPPDVSTYTTMIRGYCKMGMIENAKK 215
++SYN+LL L N + A E H + + PPDV +Y T++ G+ K G + A
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222
Query: 216 VFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ M + P+++ Y+++I CK +++A + +N M+ G P+ +TYN++++G C
Sbjct: 223 TYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 282
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+G+ EA + KMR +G + NV T+ S++ LC G+ +A ++ + + PD+
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y ++ G+ G E +LL M G++P FN + + ++D+A+L+ +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
Q PN V Y T+I LC + G + D ++MI G + +Y+ L+ G C
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKS-GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 453 VENVMQIAHEMVTK 466
+ ++ EM+ +
Sbjct: 462 WDKAEELILEMLDR 475
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 188/377 (49%), Gaps = 8/377 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P+ Y Y ++ H+L+ + +++N + + LI AY + V A
Sbjct: 339 PDIATYRTLLQGYATKGALVEMHALLDL---MVRNGIQPDHHVFNILICAYAKQEKVDQA 395
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + +Q + Y +++ VL + S+ A +F Q++ E + P ++ YT++I
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP-NIIVYTSLIH 454
Query: 203 GYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
G C + A+++ M + N + +N++I+ CK+G + E++K + M+ G +P
Sbjct: 455 GLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 514
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TYN +I G C+ G++DEA L+A M G K ++ T+ +++ G C V + D A+
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 574
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ ++ + ++P++ +Y +++ G ++ A L + G + + ++N + L +N
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
D A+ + + + D ++N +I G + GRM + +DL +G D
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMI-GALLKCGRMDEAKDLFAAHSANGLVPDVRT 693
Query: 440 YSCLLKGYCEEGNVENV 456
YS + + E+G++E +
Sbjct: 694 YSLMAENLIEQGSLEEL 710
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 167/369 (45%), Gaps = 40/369 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++ Y G K AI + + + +Y+SL+ L + A + F + K
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ PD++TY T+++GY G + + D+M ++P+ +N +I + K+ ++++A
Sbjct: 337 L-EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++M G PN + Y +I LC +G VD+A + +M G N+ + S++ G
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455
Query: 306 LCVVGKFDQAVGYLRNVMEANM-----------------------------------NPD 330
LC K+D+A + +++ + PD
Sbjct: 456 LCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 515
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ +Y +I+G C GK DEA LL M + G+KP + ++ + +D A+ L K
Sbjct: 516 IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFK 575
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M PN ++YN I+ GL + R ++L + +SG L+ + Y+ +L G C+
Sbjct: 576 EMVSSGVSPNIITYNIILQGLFHTR-RTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634
Query: 451 GNVENVMQI 459
+ +++
Sbjct: 635 NLTDEALRM 643
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 166/362 (45%), Gaps = 17/362 (4%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
NI+ +Q A+ F+ NPN CY + DVL S+ ++L
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQHGLNPN-----VVCYGTVIDVLCKSG--SVDDAML 432
Query: 116 KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQI----ENGACLYS--YNSLLGVLV 169
+ + +I + W + I + G CL + +NS++
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNL 226
+ + +E+ F +V+ V PD+ TY T+I G C G ++ A K+ M VKP++
Sbjct: 493 KEGRVIESEKLFDLMVRIGV-KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
+ Y T+ING+C+ +++A EM++ G PN +TYN ++ GL R AK L
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
+ +G + +ST+ +L GLC D+A+ +N+ ++ + +++ ++I K G+
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 671
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
DEA L A GL P V +++ + L+E G L+ L M + C + N+
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 731
Query: 407 II 408
I+
Sbjct: 732 IV 733
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 21/333 (6%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRG 203
F + + GA +Y N L + R +S A ++++ + V P V TY +I
Sbjct: 43 FDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGC 101
Query: 204 YCKMGMIENA--------KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK-CMNEMMN 254
C+ G ++ KK F V + + + ++ G C +A + M
Sbjct: 102 CCRAGRLDLGFAALGNVVKKGFRV-----DAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKML---MAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
GC P+ +YN ++ GLC R EA L MA R G +V ++ ++L G G
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+A +++ + PDV +Y +I CK D+A+ +L M G+ P ++N+
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ +G+ AI LK+M PN V+Y++++ LC GR + + D M +
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLC-KNGRSTEARKIFDSMTKR 335
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G D Y LL+GY +G + + + MV
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 73/146 (50%), Gaps = 5/146 (3%)
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P V +Y ++I C+ G+ D + L + +G + +F + + L +
Sbjct: 86 GKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSD 145
Query: 385 AI-LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR---SGHNLDFTMY 440
A+ ++L++M ++ C+P+ SYN ++ GLC + R Q+ +L+ M G D Y
Sbjct: 146 AMDIVLRRMTELGCIPDVFSYNNLLKGLC-DENRSQEALELLHMMADDRGGGSPPDVVSY 204
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +L G+ +EG+ + HEM+ +
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDR 230
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 4/194 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y + A+ F + + +YN +L L A+E + I K
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
++STY ++ G CK + + A ++F + ++ +N MI K G ++EA
Sbjct: 617 T-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 675
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K G P+ TY+ M L G ++E L M NG + S+++
Sbjct: 676 KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRK 735
Query: 306 LCVVGKFDQAVGYL 319
L G +A YL
Sbjct: 736 LLQRGDITRAGTYL 749
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
A + PTV ++ + G LD L + + + +++ ++ GLC K R
Sbjct: 85 AGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADK-RT 143
Query: 419 QDVEDLV-DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
D D+V RM G D Y+ LLKG C+E + +++ H M +G
Sbjct: 144 SDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRG 194
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 4/155 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN +L L + N A F + ++ + T+ MI K G ++ AK +F
Sbjct: 621 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDL-QLETRTFNIMIGALLKCGRMDEAKDLF 679
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ P++ Y+ M ++G LEE M GC + N+++ L
Sbjct: 680 AAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQR 739
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
G + A + + F ST +L+ +V
Sbjct: 740 GDITRAGTYLFMIDEKHFSLEASTASFLLESSPIV 774
>gi|255660898|gb|ACU25618.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 484
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 212/428 (49%), Gaps = 25/428 (5%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL--PNFV--- 402
D A +LK M + + + + G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHL 367
Query: 403 ---SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++ ++
Sbjct: 368 EPSAYNPMIEYLC-NNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSAFEL 425
Query: 460 AHEMVTKK 467
M+ +K
Sbjct: 426 LKIMLRRK 433
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 150/317 (47%), Gaps = 7/317 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEM 463
+C+ GN++ + M
Sbjct: 301 HCKSGNLDAAADVLKAM 317
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 181/364 (49%), Gaps = 28/364 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++K + G ++ A F ++ ++ A L SYN L LVR AE Q+ +
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P + +Y ++ G CK+GM+ +AK + +M V P+ + Y +++G+C G+++ A
Sbjct: 357 -IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAA 415
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + EMM C PN T N +++ L GR+ EA+ L+ KM G+ + T ++ G
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Query: 306 LCVVGKFDQAV--------------GYLRN---------VMEANMNPDVKSYEVVINGFC 342
LC G+ D+A+ G L N ++E N PD+ +Y ++NG C
Sbjct: 476 LCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLC 535
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K G+ EA +L EM L+P ++N + G++ A +LK M + C +
Sbjct: 536 KAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLE 595
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YN++I GL + K ++ ++ L+D M G + + Y+ ++ CE VE+ + E
Sbjct: 596 TYNSLILGLGI-KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDE 654
Query: 463 MVTK 466
M+ K
Sbjct: 655 MMQK 658
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 174/373 (46%), Gaps = 68/373 (18%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ R +E+ ++ +E +VP D+ T+ + I CK G + +A ++F M
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVP-DIVTFNSRISALCKEGKVLDASRIFSDM 278
Query: 221 TV-------KPNLLAYNTMINGFCKKGELEEAK--------------------------- 246
+ +PN + YN M+ GFCK G LE+AK
Sbjct: 279 ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVR 338
Query: 247 --------KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ +M ++G P+ +YN ++ GLC G + +AK ++ M+ NG + T
Sbjct: 339 HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +L G C VGK D A L+ +M N P+ + ++++ K+G+ EA LL++M
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP-----------------------QM 395
+G + N + L +GELD+AI ++K M +
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+CLP+ ++Y+T++ GLC A GR + ++L M+ D Y+ + +C++G + +
Sbjct: 519 NCLPDLITYSTLLNGLCKA-GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577
Query: 456 VMQIAHEMVTKKG 468
++ +M KKG
Sbjct: 578 AFRVLKDM-EKKG 589
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 159/364 (43%), Gaps = 29/364 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G V AA + + Y+ N LL L ++ I AEE ++ E
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM-NEK 460
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK------------------------- 223
D T ++ G C G ++ A ++ M V
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 224 -PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P+L+ Y+T++NG CK G EAK EMM +P+ + YN I+ C G++ A
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
++ M G ++ T+ S++ GL + + + G + + E ++P++ +Y I C
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ K ++A +LL EM + + P VFSF + + + D A + + + C
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEG 699
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
Y+ + L +A G++ +L++ ++ G L +Y L++ C++ +E I H+
Sbjct: 700 LYSLMFNEL-LAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHK 758
Query: 463 MVTK 466
M+ +
Sbjct: 759 MIDR 762
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 150/330 (45%), Gaps = 10/330 (3%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
F + +G L + ++ +LVR + +E + I+ ++ +S+ +++ +
Sbjct: 27 FSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFA 86
Query: 206 KMGMIENAKKVFDVMTV-----KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
K I+ A F ++ KP++ YN ++ K+ +E +M+ G P
Sbjct: 87 KSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQ 146
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
T+N +I LC + VD A+ L +M G K N T +++G C G D+ + L
Sbjct: 147 TYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLN 206
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ + P+ Y +++ FC+ G++D++ ++++MR GL P + +FN+ L + G
Sbjct: 207 AMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266
Query: 381 ELDRAILLLKQMPQMDCL----PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
++ A + M + L PN ++YN ++ G C G ++D + L + + +
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV-GLLEDAKTLFESIRENDDLAS 325
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+G G + +M K
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDK 355
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 11/235 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
I + +G + +A F K +E C L +YNSL+ L N I ++
Sbjct: 565 FIHHFCKQGKISSA---FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM- 620
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGEL 242
KE + P++ TY T I+ C+ +E+A + D M + PN+ ++ +I FCK +
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDF 680
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ A++ ++ C E Y+ M L G++ +A L+ + GF+ +K +
Sbjct: 681 DMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDL 739
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
++ LC + + A G L +++ D + VI+G K+G EA S +M
Sbjct: 740 VESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 193/409 (47%), Gaps = 10/409 (2%)
Query: 65 QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA----ASLLKNSNK 120
++ P A+ FN A++ P T+ Y + D +A LL+ +
Sbjct: 84 RSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLR 143
Query: 121 LSDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
++ + L++ + + A+ H+ ++ ++SY+ LL L A++
Sbjct: 144 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203
Query: 180 FFHQIVKENVV-PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING 235
+ + V P+V Y T+I G+ K G + A +F M + P+L+ YN++++
Sbjct: 204 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 263
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
CK +++A+ + +M+N+ PN TYN +IYG G+ EA + +MR + +
Sbjct: 264 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V T ++ LC GK +A + NPDV SY +++NG+ G + L
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
M G+ P ++FN + + G LD+A+++ +M P+ V+Y T+I LC
Sbjct: 384 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI- 442
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G+M D + ++MI G D Y+CL++G+C G++ ++ E++
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM 491
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 170/340 (50%), Gaps = 5/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I + G+V A F + Q L +YNS++ L + ++ AE F Q+V +
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
V+P + TY +I GY G + A +VF M ++ P+++ + ++ CK G+++EA
Sbjct: 285 VLPNN-WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + M +G P+ +YN M+ G G + + L M +G + T ++K
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 403
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
G D+A+ + + + PDV +Y VI C+IGK D+A+ +M +G+ P
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+++N + + +G L +A L+ ++ + V +++II LC GR+ D +++
Sbjct: 464 KYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL-GRVMDAQNIF 522
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
D + G + D +YS L+ GYC G +E +++ MV+
Sbjct: 523 DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 194/381 (50%), Gaps = 9/381 (2%)
Query: 123 DFF-ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
DF+ + LIKAY + G + A+ F++ + + +Y +++ L R+ + A E F
Sbjct: 393 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-DVMT--VKPNLLAYNTMINGFCK 238
+Q++ + V P D Y +I+G+C G + AK++ ++M + +++ ++++IN CK
Sbjct: 453 NQMIDQGVAP-DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 511
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G + +A+ + +N G P+ + Y+ ++ G C+ G++++A + M G + NV
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 571
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ G C +G+ D+ + R +++ + P Y ++I+G + G++ A EM
Sbjct: 572 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMT 631
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
G+ + ++N V R L +N D AI L K++ M+ N ++ NT+I G+ + R+
Sbjct: 632 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR-RV 690
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLT 478
++ +DL + RS YS ++ +EG VE + M + L
Sbjct: 691 EEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM--QNAGCEPNSRLLN 748
Query: 479 RVVDALLLM-WIVTGGSWISR 498
VV LL IV G+++S+
Sbjct: 749 HVVRELLKKNEIVRAGAYLSK 769
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 164/324 (50%), Gaps = 5/324 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+S L+ + G +K A F ++SYN +L + + F ++
Sbjct: 327 LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML 386
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ + P D T+ +I+ Y GM++ A +F+ M VKP+++ Y T+I C+ G++
Sbjct: 387 GDGIAP-DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 445
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A + N+M+++G P++ YN +I G C +G + +AK L++++ NG ++ S+
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 505
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ LC +G+ A + ++PD Y ++++G+C +GK ++A+ + M + G+
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+P V + + + G +D + L ++M Q P+ + Y+ II GL A GR +
Sbjct: 566 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQA-GRTVPAK 624
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKG 446
M SG +D Y+ +L+G
Sbjct: 625 VKFHEMTESGIAMDICTYNIVLRG 648
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 145/327 (44%), Gaps = 13/327 (3%)
Query: 75 FNWASNPNPNPNKYHHT--TPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKA 132
FN + P+KY + + +L + LIS ++ N L F S +I
Sbjct: 452 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELIS---EIMNNGMHLDIVFFSSIINN 508
Query: 133 YGDRGNVKAA--IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVV 190
G V A IF + A +YS L+ V ++ A F +V +
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM--LMDGYCLVGKMEKALRVFDAMVSAGI- 565
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKK 247
P+V Y T++ GYCK+G I+ +F M +KP+ + Y+ +I+G + G AK
Sbjct: 566 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKV 625
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+EM G + TYN ++ GL N DEA L ++R K N+ T +M+ G+
Sbjct: 626 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 685
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
+ ++A ++ + + P V +Y ++I K G +EA + M+ G +P
Sbjct: 686 QTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 745
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQ 394
N V R L++ E+ RA L ++ +
Sbjct: 746 LLNHVVRELLKKNEIVRAGAYLSKIDE 772
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 8/231 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQ--IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L+ Y G + + F + Q I+ LYS ++ L + A+ FH++
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI--IIDGLFQAGRTVPAKVKFHEMT- 631
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELE 243
E+ + D+ TY ++RG K + A +F M VK N++ NTMI+G + +E
Sbjct: 632 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 691
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EAK + P+ +TY+ MI L G V+EA+ + + M+ G + N ++
Sbjct: 692 EAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVV 751
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+ L + +A YL + E N + + + ++++ F G E I L
Sbjct: 752 RELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++P +Y ++++ + + + A++ ++ GL+ + N + E D A+
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166
Query: 387 -LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH--NLDFTMYSCL 443
+LL + P++ C+P+ SY+ ++ LC +G+ +DL+ M G + + Y+ +
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLC-DQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 225
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+ G+ +EG+V + EMV +
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQR 248
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 185/363 (50%), Gaps = 6/363 (1%)
Query: 107 LISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLG 166
+IS+ + + + + + LIK + + A+ F + ++ + ++N+LL
Sbjct: 98 VISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH 157
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VK 223
L + + A FHQ+ + P+V T+TT++ G C+ G I A + D M ++
Sbjct: 158 GLCVEDRVSEALNLFHQMFE-TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQ 216
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMN-RGCRPNELTYNAMIYGLCINGRVDEAKM 282
P + Y T+++G CK G+ A + +M PN + Y+A+I LC +GR +A+
Sbjct: 217 PTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M+ G ++ T+ SM+ G C G++ A L+ ++E ++PDV +Y +IN F
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K GK EA L EM RG+ P +++++ + LD A + M C PN +
Sbjct: 337 KEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI 396
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++NT+I G C AK R+ D +L+ M +G D T Y+ L+ G+ G++ + + E
Sbjct: 397 TFNTLIDGYCGAK-RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 463 MVT 465
M++
Sbjct: 456 MIS 458
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 192/389 (49%), Gaps = 20/389 (5%)
Query: 95 YTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y+AI D L S A +L ++ D F + +I + G A +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + + +YN+L+ V+ AEE + +++ ++P + TY++MI G+CK +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI-TYSSMIDGFCKQNRL 376
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ +F +M K PNL+ +NT+I+G+C +++ + ++EM G + TYN +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-- 325
I+G + G ++ A L+ +M +G ++ T ++L GLC GK A+ + + ++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 326 ---------NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ PDV++Y ++I+G GK EA L +EM RG+ P +++++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ LD A + M PN V++ T+I G C A GR+ D +L M R G +
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA-GRVDDGLELFCEMGRRGIVAN 615
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
Y L+ G+ + GN+ + I EM++
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMIS 644
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 166/320 (51%), Gaps = 16/320 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++++ L + A+ F ++ +E + PD+ TY +MI G+C G +A+++ M
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEM-QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ YN +IN F K+G+ EA++ +EM+ RG PN +TY++MI G C R+
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A+ + M G N+ T +++ G C + D + L + E + D +Y +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM----- 392
I+GF +G + A+ LL+EM + GL P + + + + L +NG+L A+ + K M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Query: 393 ------PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
P P+ +YN +I GL + +G+ + E+L + M G D YS ++ G
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGL-INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 447 YCEEGNVENVMQIAHEMVTK 466
C++ ++ Q+ M +K
Sbjct: 556 LCKQSRLDEATQMFDSMGSK 575
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 164/336 (48%), Gaps = 6/336 (1%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V A+ FHQ + + ++ +L+ L R I A +++++ + P + TY
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI-TYG 223
Query: 199 TMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T++ G CK+G +A +K+ ++ + PN++ Y+ +I+ CK G +A+ EM
Sbjct: 224 TIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G P+ TYN+MI G C +GR +A+ L+ +M +V T+ +++ GKF +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A ++ + P+ +Y +I+GFCK + D A + M +G P + +FN +
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+D + LL +M + + + +YNT+I G + G + DL+ MI SG
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV-GDLNAALDLLQEMISSGLC 462
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
D LL G C+ G +++ +++ M K L
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 126/246 (51%), Gaps = 2/246 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ ++ ++ +I FC +L A ++ G P+ +T+N +++GLC+ RV EA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L +M + NV T +++ GLC G+ +AV L +ME + P +Y +++G
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 342 CKIGKSDEAISLLKEMRA-RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CKIG + A+ LL++M + P V ++A+ L ++G A L +M + P+
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+YN++I G C + GR D E L+ M+ + D Y+ L+ + +EG ++
Sbjct: 290 LFTYNSMIVGFC-SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348
Query: 461 HEMVTK 466
EM+ +
Sbjct: 349 DEMLPR 354
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 15/278 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y + + H+ + A +YN+L+ V + A + +++
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------VKPNLLAYNTMIN 234
+ P D+ T T++ G C G +++A ++F VM V+P++ YN +I+
Sbjct: 461 LCP-DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
G +G+ EA++ EM +RG P+ +TY++MI GLC R+DEA + M F
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
NV T +++ G C G+ D + + + + +Y +I GF K+G + A+ +
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIF 639
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+EM + G+ P + + L EL RA+ +L+++
Sbjct: 640 QEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 139/299 (46%), Gaps = 15/299 (5%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I + + + AA F+ L ++N+L+ I E H++ +
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+V D +TY T+I G+ +G + A + M P+++ +T+++G C G+L+
Sbjct: 424 TGLVA-DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 244 EAKKCMNEMMNR-----------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+A + M G P+ TYN +I GL G+ EA+ L +M G
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ T+ SM+ GLC + D+A ++ + +P+V ++ +ING+CK G+ D+ +
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L EM RG+ ++ + + G ++ A+ + ++M P+ ++ ++ GL
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M + R + ++ +I C ++ A K+ G +V T ++L GLCV
Sbjct: 103 QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVE 162
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ +A+ + E P+V ++ ++NG C+ G+ EA++LL M GL+PT ++
Sbjct: 163 DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222
Query: 370 NAVFRILVENGELDRAILLLKQMPQMD-CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ + + G+ A+ LL++M ++ +PN V Y+ II LC GR D ++L M
Sbjct: 223 GTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLC-KDGRHSDAQNLFTEM 281
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G D Y+ ++ G+C G + Q+ EM+ +K
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 17/245 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI + G++ AA+ + I +G C + + ++LL L +K A E F + K
Sbjct: 436 LIHGFYLVGDLNAALDLLQE--MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Query: 187 E----------NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
N V PDV TY +I G G A+++++ M + P+ + Y++MI
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G CK+ L+EA + + M ++ PN +T+ +I G C GRVD+ L +M G
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
N T+ +++ G VG + A+ + ++ + + PD + ++ G + A+++
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673
Query: 354 LKEMR 358
L++++
Sbjct: 674 LEKLQ 678
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+S++ L + + + A + F + ++ P+V T+TT+I GYCK G +++ ++F
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSF-SPNVVTFTTLINGYCKAGRVDDGLELFCE 606
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + N + Y T+I GF K G + A EM++ G P+ +T M+ GL
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666
Query: 277 VDEAKMLMAKMRLN 290
+ A ++ K++++
Sbjct: 667 LKRAVAMLEKLQMS 680
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 200/444 (45%), Gaps = 60/444 (13%)
Query: 31 LNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHH 90
+NP++P+ + + L + V K + N L FF+ +N N + H
Sbjct: 28 INPRDPNKQQL-----------LQESDVLKRLKTDRNLSSVLGFFSAIANSN----AFQH 72
Query: 91 TTPCYTAITDVLLSHSLISIAASLLKNS-----NKLSDFFISKLIKAYGDRGNVKAAIFW 145
T Y + + L + + +L+ N D FI +I Y G+ + A+
Sbjct: 73 TASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFIC-IINGYKRVGSAEQALKM 131
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
F++ + + YN LL L+ N ++ + + K+ ++P
Sbjct: 132 FYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIP-------------- 177
Query: 206 KMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
N+ YN ++ CK ++ A K EM N+GC P+ +TY
Sbjct: 178 -------------------NVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYT 218
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
M+ LC G++D+A+ L + FK +V + +++ G+C G+ + A+ L +M+
Sbjct: 219 TMVSSLCKAGKIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDN 273
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
++P+V SY +IN C G + A +L +M RG + +F + + G+L A
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ L K M Q C PN V+YNT+I GLC + G +++ + D+M RSG + T YS L+
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLC-SNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392
Query: 446 GYCEEGNVENVMQIAHEMVTKKGR 469
G+ + G++ + + M++ R
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCR 416
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 190/391 (48%), Gaps = 16/391 (4%)
Query: 87 KYHHTTPCYTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAA 142
++ + P Y A+ D + I +A LL N + S +I + GNV+ A
Sbjct: 239 RFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298
Query: 143 IFWFHQAKQIENGACLYSYNSLL-GVLVRVNSIKLAEEF-FHQIVKENVVPPDVSTYTTM 200
F Q A ++++ L+ G +R KL E +++ ++ P+V Y T+
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRG---KLYEALDLWKLMIQDGCEPNVVAYNTL 355
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I G C G +E A +V D M PN+ Y+ +I+GF K G+L A + N M++ GC
Sbjct: 356 IHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGC 415
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
RPN +TY M+ LC N D+A L+ KM L G N T + +KGLC G+ + A+
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMK 475
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L + P++ +Y +++ ++ K +EA L +E+ AR L+P + ++N V
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM--IRSGHNL 435
G + A+ L + P+ ++YNT+I C +G+++ LV+R+ ++ H
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYC-KQGKVKIAAQLVERVSSMKEWHP- 593
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ L+ G C N+E M + + +
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQ 624
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 161/345 (46%), Gaps = 41/345 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LIK RG + A+ + Q + +YN+L+ L S++ A + Q+ +
Sbjct: 318 TPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQR 377
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+P +V+TY+ +I G+ K G + A + ++ M +PN++ Y M++ CK +
Sbjct: 378 SGCLP-NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFD 436
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + +M GC PN +T+N I GLC NGRV+ A L+ +M+ +G N++T+ +L
Sbjct: 437 QANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELL 496
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
L + K+++A G + + N+ P++ +Y V+ GF + G EA+ L + RG
Sbjct: 497 DALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTA 556
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMD--------------------------- 396
P ++N + + G++ A L++++ M
Sbjct: 557 PDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMA 616
Query: 397 ---------CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
PNF ++N ++ + G M + ++D ++R G
Sbjct: 617 FLDKAINQGICPNFATWNALVRCFFDSLGHMGPIH-ILDDILRKG 660
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 159/309 (51%), Gaps = 5/309 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+ N ++ R + A +I K P V T+ T++ G C G + A ++
Sbjct: 125 LYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTV-TFNTLLNGLCLEGRVFEAVELV 183
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M + P+L+ NT++NG C K + EA + MM GC+PN+ TY ++ +C +
Sbjct: 184 DCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKS 243
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G A L+ KM K +V T+ ++ LC G+ D A+ + + + +V +Y
Sbjct: 244 GNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTY 303
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I FC G+ D+ LL++M R + P V +F+A+ LV+ G+L A L +M
Sbjct: 304 NSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMIT 363
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN ++YN++I GLC K R+ + ++D M+ G + D Y+ L+ G+C+ V+
Sbjct: 364 RGIEPNTITYNSLIYGLCNDK-RLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVD 422
Query: 455 NVMQIAHEM 463
+ M++ +M
Sbjct: 423 DGMRLFRKM 431
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 179/359 (49%), Gaps = 5/359 (1%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+ + A ++ N + + F ++ GN +A+ + + + + +Y ++
Sbjct: 215 VDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDN 274
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-DVMTVK--P 224
L + + A FF ++ + + +V TY ++I +C G ++ ++ D++T K P
Sbjct: 275 LCKDGRLDDALSFFSEMETKGI-KANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITP 333
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N++ ++ +I+ K+G+L EAK NEM+ RG PN +TYN++IYGLC + R+DEA +M
Sbjct: 334 NVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMM 393
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G ++ T+ ++ G C + D + R + M D +Y +I GFC+
Sbjct: 394 DLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQS 453
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
K A + +EM ++G+ P + ++ + L +NGEL+ A+ +L QM + + Y
Sbjct: 454 RKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIY 513
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
N II G+C A ++ D L + G D Y+ +L G C+ ++ + +M
Sbjct: 514 NIIIHGMCNAN-KVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKM 571
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 158/309 (51%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC---KMGMIENAKKVF 217
+N L G+L R L Q+ + + D+ T MI +C K+G +A
Sbjct: 93 FNRLFGLLARTKQYDLVLALCKQMELKGIAY-DLYTLNIMINCFCRRRKLGFAFSAMGKI 151
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ +PN + +NT++NG C +G + EA + ++ M+ P+ +T N ++ GLC+ RV
Sbjct: 152 FKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRV 211
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L+A+M NG + N T+ +L +C G A+ LR + + P V +Y ++
Sbjct: 212 SEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTII 271
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ CK G+ D+A+S EM +G+K VF++N++ G D LL+ M
Sbjct: 272 IDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKI 331
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN V+++ +I L + +G++ + +DL + MI G + Y+ L+ G C + ++
Sbjct: 332 TPNVVTFSALIDSL-VKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEAN 390
Query: 458 QIAHEMVTK 466
Q+ MV+K
Sbjct: 391 QMMDLMVSK 399
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 161/311 (51%), Gaps = 5/311 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y +L + + + A + ++ + + P V TYT +I CK G +++A F
Sbjct: 231 FTYGPILNRMCKSGNTASALDLLRKM-EHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFS 289
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M +K N+ YN++I FC G ++ + + +M+ R PN +T++A+I L G
Sbjct: 290 EMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEG 349
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++ EAK L +M G + N T+ S++ GLC + D+A + ++ +PD+ +Y
Sbjct: 350 KLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYN 409
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++INGFCK + D+ + L ++M RG+ +++ + + ++ +L A + ++M
Sbjct: 410 ILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQ 469
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P ++Y ++ GLC G +++ ++D+M + LD +Y+ ++ G C V++
Sbjct: 470 GVHPGIMTYAILLDGLC-DNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDD 528
Query: 456 VMQIAHEMVTK 466
+ + +K
Sbjct: 529 AWSLFCSLPSK 539
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 150/283 (53%), Gaps = 11/283 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ LV+ + A++ +++++ + P+ TY ++I G C ++ A ++ D+
Sbjct: 337 TFSALIDSLVKEGKLTEAKDLYNEMITRGI-EPNTITYNSLIYGLCNDKRLDEANQMMDL 395
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P++ YN +INGFCK ++++ + +M RG + +TY+ +I G C + +
Sbjct: 396 MVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRK 455
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ AK + +M G + T+ +L GLC G+ ++A+G L + + M D+ Y +
Sbjct: 456 LIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNI 515
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C K D+A SL + ++G+K + S+N + L + L A L ++M +
Sbjct: 516 IIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDG 575
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVE---DLVDRMIRSGHNLD 436
P+ +YNT+I A R D+ L++ M R G + D
Sbjct: 576 YEPDGCTYNTLI----RAHLRGNDITTSVQLIEEMKRCGFSSD 614
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 129/285 (45%), Gaps = 29/285 (10%)
Query: 115 LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSI 174
L +N++ D +SK D I F +AKQ+++G L+ SL G++
Sbjct: 386 LDEANQMMDLMVSKGCDP--DIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIA----- 438
Query: 175 KLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNT 231
D TY+T+I+G+C+ + AKKVF M V P ++ Y
Sbjct: 439 ------------------DTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAI 480
Query: 232 MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG 291
+++G C GELEEA +++M + YN +I+G+C +VD+A L + G
Sbjct: 481 LLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKG 540
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
K ++ ++ ML GLC +A R + E PD +Y +I + ++
Sbjct: 541 VKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSV 600
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
L++EM+ G + V +L +GELD++ L + P D
Sbjct: 601 QLIEEMKRCGFSSDASTVKIVMDML-SSGELDKSFLNMLSGPFGD 644
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 114/244 (46%), Gaps = 1/244 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P ++ +N + + + + +M +G + T N MI C ++ A
Sbjct: 88 PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M K+ G++ N T ++L GLC+ G+ +AV + ++ + PD+ + ++NG C
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+ EA+ L+ M A G +P F++ + + ++G A+ LL++M P+ V+
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y II LC GR+ D M G + Y+ L+ +C G ++ Q+ +M
Sbjct: 268 YTIIIDNLC-KDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDM 326
Query: 464 VTKK 467
+T+K
Sbjct: 327 ITRK 330
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 211/425 (49%), Gaps = 19/425 (4%)
Query: 55 SNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASL 114
S++ VI + L FF+WAS P ++++ +L S+ + +
Sbjct: 61 SDVAHFVIDRVHDAELGLKFFDWAST---RPFSCSLDGVAHSSLLKLLASYRVFPEIELV 117
Query: 115 LKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSY---NSLLGV 167
L+N K + S LI AY + G++ A+ FH +++ N C ++ N LL
Sbjct: 118 LENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHN--CFPTFVASNLLLNG 175
Query: 168 LVRVNSIKLAEEFFHQIVK-ENVVPPDVSTYTT--MIRGYCKMGMIENAKKVFDVMTVK- 223
LV+ + +A + + ++++ ++ V YTT M++G C +G IE +++ K
Sbjct: 176 LVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKC 235
Query: 224 --PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
P+++ YN +I+G+CKKG+L+ A + +NE+ +G P TY A+I G C G +
Sbjct: 236 CVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVD 295
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L+ +M G NV +++ G +A LR + E PD+ +Y ++IN
Sbjct: 296 QLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFS 355
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK G+ +EA LL++ + RGL P FS+ + + G+ +A +L ++ ++ +
Sbjct: 356 CKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDL 415
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
VSY I G+ +A G + + ++M+ G D +Y+ L+ G C++G + + +
Sbjct: 416 VSYGAFIHGVVVA-GEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLS 474
Query: 462 EMVTK 466
EM+ +
Sbjct: 475 EMLDR 479
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 163/339 (48%), Gaps = 5/339 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I A G V A + ++ G + +YN ++ + I+ A+E + KE
Sbjct: 316 VIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEK-AKER 374
Query: 189 VVPPDVSTYTTMIRGYCKMG-MIENAKKVFDVMTV--KPNLLAYNTMINGFCKKGELEEA 245
+ P+ +YT ++ YCK G ++ + +F + + K +L++Y I+G GE++ A
Sbjct: 375 GLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVA 434
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+MM +G P+ YN ++ GLC GR+ K+L+++M + +V +++ G
Sbjct: 435 LMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDG 494
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
G+ D+A+ + ++ ++P + Y +I GFCK GK +A+S L EM + P
Sbjct: 495 FIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPD 554
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++++ V V+ ++ A+ + QM + PN ++Y ++I G C K M E +
Sbjct: 555 EYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFC-KKADMIRAEKVF 613
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M + Y+ L+ G+ + G E I M+
Sbjct: 614 SGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELML 652
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 195/435 (44%), Gaps = 40/435 (9%)
Query: 124 FFISKLIKAYGDRGN-VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
F + L+ AY +G+ VKA+ F A +I + L SY + + +V I +A
Sbjct: 381 FSYTPLMHAYCKKGDYVKASGMLFRIA-EIGEKSDLVSYGAFIHGVVVAGEIDVALMVRE 439
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKK 239
+++++ V P D Y ++ G CK G I K + M V+P++ + T+I+GF +
Sbjct: 440 KMMEKGVFP-DAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRN 498
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
GEL+EA K ++ +G P + YNAMI G C G++ +A + +M + T+
Sbjct: 499 GELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTY 558
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G A+ +M+ P+V +Y +INGFCK A + M++
Sbjct: 559 STVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKS 618
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
L P V ++ + + G+ +RA + + M CLPN +++ +I GL
Sbjct: 619 FDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPV 678
Query: 420 DVE-------------DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+E D M+ G + Y+ ++ C+ G V+ + +M+TK
Sbjct: 679 LIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTK 738
Query: 467 ------------------KGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVF---VHQV 505
KG+ + +N ++ ++ + L V + ++++ + +
Sbjct: 739 GFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEA 798
Query: 506 VVIMERTVEDGKRSE 520
VI++ VED K S+
Sbjct: 799 SVILQTLVEDSKFSD 813
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 94/223 (42%), Gaps = 24/223 (10%)
Query: 86 NKYHHTTPCYT---AITDVLLSH---SLISIAASLLKNSNKLSDFFISKLIKAYGDRGNV 139
N HH YT I + H S + + ++K+ K + + LI + + ++
Sbjct: 547 NSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADM 606
Query: 140 KAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTT 199
A F K + + +Y +L+G + + A F ++ +P D +T+
Sbjct: 607 IRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPND-ATFHY 665
Query: 200 MIRGYCKMG----MIENAKK-------VFDVMTV------KPNLLAYNTMINGFCKKGEL 242
+I G +IE + D T+ + AYN++I CK G +
Sbjct: 666 LINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTV 725
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+ A+ + +M+ +G + + + A+++GLC G+ E + +++
Sbjct: 726 DTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIIS 768
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 200/444 (45%), Gaps = 60/444 (13%)
Query: 31 LNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHH 90
+NP++P+ + + L + V K + N L FF+ +N N + H
Sbjct: 28 INPRDPNKQQL-----------LQESDVLKRLKTDRNLSSVLGFFSAIANSN----AFQH 72
Query: 91 TTPCYTAITDVLLSHSLISIAASLLKNS-----NKLSDFFISKLIKAYGDRGNVKAAIFW 145
T Y + + L + + +L+ N D FI +I Y G+ + A+
Sbjct: 73 TASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFIC-IINGYKRVGSAEQALKM 131
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
F++ + + YN LL L+ N ++ + + K+ ++P
Sbjct: 132 FYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIP-------------- 177
Query: 206 KMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
N+ YN ++ CK ++ A K EM N+GC P+ +TY
Sbjct: 178 -------------------NVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYT 218
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
M+ LC G++D+A+ L + FK +V + +++ G+C G+ + A+ L +M+
Sbjct: 219 TMVSSLCKAGKIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDN 273
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
++P+V SY +IN C G + A +L +M RG + +F + + G+L A
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ L K M Q C PN V+YNT+I GLC + G +++ + D+M RSG + T YS L+
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLC-SNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392
Query: 446 GYCEEGNVENVMQIAHEMVTKKGR 469
G+ + G++ + + M++ R
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCR 416
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 190/391 (48%), Gaps = 16/391 (4%)
Query: 87 KYHHTTPCYTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAA 142
++ + P Y A+ D + I +A LL N + S +I + GNV+ A
Sbjct: 239 RFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298
Query: 143 IFWFHQAKQIENGACLYSYNSLL-GVLVRVNSIKLAEEF-FHQIVKENVVPPDVSTYTTM 200
F Q A ++++ L+ G +R KL E +++ ++ P+V Y T+
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRG---KLYEALDLWKLMIQDGCEPNVVAYNTL 355
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I G C G +E A +V D M PN+ Y+ +I+GF K G+L A + N M++ GC
Sbjct: 356 IHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGC 415
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
RPN +TY M+ LC N D+A L+ KM L G N T + +KGLC G+ + A+
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMK 475
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L + P++ +Y +++ ++ K +EA L +E+ AR L+P + ++N V
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM--IRSGHNL 435
G + A+ L + P+ ++YNT+I C +G+++ LV+R+ ++ H
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYC-KQGKVKIAAQLVERVSSMKEWHP- 593
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ L+ G C N+E M + + +
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQ 624
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 161/345 (46%), Gaps = 41/345 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LIK RG + A+ + Q + +YN+L+ L S++ A + Q+ +
Sbjct: 318 TPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQR 377
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+P +V+TY+ +I G+ K G + A + ++ M +PN++ Y M++ CK +
Sbjct: 378 SGCLP-NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFD 436
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + +M GC PN +T+N I GLC NGRV+ A L+ +M+ +G N++T+ +L
Sbjct: 437 QANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELL 496
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
L + K+++A G + + N+ P++ +Y V+ GF + G EA+ L + RG
Sbjct: 497 DALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTA 556
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMD--------------------------- 396
P ++N + + G++ A L++++ M
Sbjct: 557 PDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMA 616
Query: 397 ---------CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
PNF ++N ++ + G M + ++D ++R G
Sbjct: 617 FLDKAINQGICPNFATWNALVRCFFDSLGHMGPIH-ILDDILRKG 660
>gi|255660892|gb|ACU25615.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 481
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 213/428 (49%), Gaps = 25/428 (5%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFXWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG +G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVXLKEMMDKYLAPTDNSIFMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL--PNFV--- 402
D A +LK M + + + + G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHL 367
Query: 403 ---SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++ ++
Sbjct: 368 EPSAYNPMIEYLC-NNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSAFEL 425
Query: 460 AHEMVTKK 467
M+ +K
Sbjct: 426 LKIMLRRK 433
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 150/317 (47%), Gaps = 7/317 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFXWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVXLKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEM 463
+C+ GN++ + M
Sbjct: 301 HCKSGNLDAAADVLKAM 317
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
M V YN+++ + KK E +AK ++ M+ P+ + +++
Sbjct: 429 MLRRKVDSEKSXYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSSLFRSVM 480
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 166/335 (49%), Gaps = 10/335 (2%)
Query: 137 GNVKAAIF---WFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP 191
G VK F W + GA + +Y +L+ R A F +++++ + P
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP 226
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
V YT +IRG C I A+ +F M + PNL YNTM++G+CK +++A +
Sbjct: 227 T-VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
EM+ G PN +T+ +I GLC + A+ + M G N+ + ++ G C
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G +A+ + + + PDV +Y ++I G C + + +EA LL+EM+ +G P +
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + + G +++AI + QM + PN ++++T+I G C A G+M+ L M
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA-GKMEAAMGLYTEM 464
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G D Y+ L+ G+ ++GN + ++ EM
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 175/352 (49%), Gaps = 8/352 (2%)
Query: 118 SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLA 177
S+K + LI A+ + G V+ A++ +++ + + + N +L LV+
Sbjct: 121 SSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTM 177
Query: 178 EEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMIN 234
+ + +V P+V TY T+I G C+ G A ++FD M K P ++ Y +I
Sbjct: 178 WKVYGDMVARGA-SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
G C + + EA+ M N G PN TYN M+ G C V +A L +M +G
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLP 296
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
NV T ++ GLC + A +L ++ + P++ Y +I+G+CK G EA+SL
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
E+ + P VF+++ + + L ++ A LL++M + LPN V+YNT+I G C
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC-K 415
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+G M+ ++ +M G + +S L+ GYC+ G +E M + EMV K
Sbjct: 416 EGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 146/267 (54%), Gaps = 5/267 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+YN+++ ++ +K A E + +++ + ++P +V T+ +I G CK + +A+K
Sbjct: 263 LYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLP-NVVTFGILIDGLCKTDEMVSARKFL 321
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V PN+ YN +I+G+CK G L EA +E+ P+ TY+ +I GLC
Sbjct: 322 IDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGV 381
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R++EA L+ +M+ GF N T+ +++ G C G ++A+ + E + P++ ++
Sbjct: 382 DRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G+CK GK + A+ L EM +GL P V ++ A+ ++G A L K+M +
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDV 421
PN + + +I GLC GR+ D
Sbjct: 502 AGLHPNVFTLSCLIDGLC-KDGRISDA 527
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 190/377 (50%), Gaps = 19/377 (5%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
Y+AI VL L + A L+++ LI+ + + F+ ++E+
Sbjct: 73 YSAIIHVLTGAKLYAKARCLMRD-----------LIQCLQNSRRSRICCSVFNVLSRLES 121
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
++ N +++ + + L EE K +V+P + ++ G K G +
Sbjct: 122 SK--FTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPA-MQACNMVLDGLVKKGRFDTMW 178
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
KV+ M + PN++ Y T+I+G C++G+ +A + +EM+ + P + Y +I GL
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGL 238
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C R+ EA+ + MR +G N+ T+ +M+ G C + +A+ + ++ + P+V
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNV 298
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
++ ++I+G CK + A L +M + G+ P +F +N + + G L A+ L +
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ + + LP+ +Y+ +I GLC RM++ + L+ M + G + Y+ L+ GYC+EG
Sbjct: 359 IEKHEILPDVFTYSILIKGLC-GVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEG 417
Query: 452 NVENVMQIAHEMVTKKG 468
N+E +++ +M T+KG
Sbjct: 418 NMEKAIEVCSQM-TEKG 433
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 155/312 (49%), Gaps = 12/312 (3%)
Query: 87 KYHHTTPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAA 142
K T YT + L S IS A S+ ++NS L + + + ++ Y +VK A
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282
Query: 143 IFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
+ + + + +G + ++ L+ L + + + A +F + VVP ++ Y +
Sbjct: 283 LELYQE--MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP-NIFVYNCL 339
Query: 201 IRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I GYCK G + A + + + P++ Y+ +I G C +EEA + EM +G
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
PN +TYN +I G C G +++A + ++M G + N+ T +++ G C GK + A+G
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
++ + PDV +Y +I+G K G + EA L KEM+ GL P VF+ + + L
Sbjct: 460 LYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519
Query: 378 ENGELDRAILLL 389
++G + AI L
Sbjct: 520 KDGRISDAIKLF 531
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 204/441 (46%), Gaps = 60/441 (13%)
Query: 85 PNKYHHTTPCYTAITDVLLSHSLISIAAS----LLKNSNKLSDFFISKLIKAYGDRGN-- 138
PN + H+ ++A+ +L+ + A + +++ S + L+ YG+ G+
Sbjct: 126 PN-FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNP 184
Query: 139 --VKAAIFWFHQAKQIENG-------------ACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + QA+++ G + + NSLLG LV+V + LA E + +
Sbjct: 185 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244
Query: 184 IVKENV----------------------------------VPPDVSTYTTMIRGYCKMGM 209
+V+ V V PDV TY T+I YC+ G+
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 304
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+E A ++ D M+ +KP + YN +ING CK G+ AK ++EM+ G P+ TYN
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
++ C N + +A+ + +M G ++ + +++ L G DQA+ Y R++ A
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 424
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PD Y ++I GFC+ G EA+ + EM +G V ++N + L + L A
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 484
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L +M + P+F ++ T+I G G M L + MI+ D Y+ L+ G
Sbjct: 485 ELFTEMTERGVFPDFYTFTTLINGYS-KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 543
Query: 447 YCEEGNVENVMQIAHEMVTKK 467
+C+ +E V ++ ++M++++
Sbjct: 544 FCKGSEMEKVNELWNDMISRR 564
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 157/288 (54%), Gaps = 7/288 (2%)
Query: 150 KQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ +E G L +YN++L L + + A+E F ++ + V P D T+TT+I GY K
Sbjct: 454 EMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP-DFYTFTTLINGYSKD 512
Query: 208 GMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G + A +F++M +KP+++ YNT+I+GFCK E+E+ + N+M++R PN ++Y
Sbjct: 513 GNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISY 572
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+I G C G V EA L +M GF+ + T +++KG C G +A +L N++
Sbjct: 573 GILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLL 632
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ PD +Y +INGF K D A +L+ +M GL P V ++N + G +
Sbjct: 633 KGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQE 692
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
A L++ +M + P+ +Y ++I G + + +++ + D M++ G
Sbjct: 693 AELIMLKMIERGVNPDRSTYTSLINGH-VTQNNLKEAFRVHDEMLQRG 739
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 171/380 (45%), Gaps = 75/380 (19%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN LL R +++ AE F ++ + VVP D+ +++ +I K G ++ A K F
Sbjct: 361 TYNILLVECCRNDNMMDAERIFDEMPSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRD 419
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+ + Y +I GFC+ G + EA K +EM+ +GC + +TYN ++ GLC
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L +M G + T +++ G G ++AV +++ N+ PDV +Y
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539
Query: 337 VINGFCK-----------------------------------IGKSDEAISLLKEMRARG 361
+I+GFCK +G EA L EM +G
Sbjct: 540 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 599
Query: 362 LKPTVFSFNAV---------------------FRILVENG--------------ELDRAI 386
+ T+ + N + + +V +G +DRA
Sbjct: 600 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 659
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+ +M LP+ ++YN I+ G +GRMQ+ E ++ +MI G N D + Y+ L+ G
Sbjct: 660 ALVNKMENSGLLPDVITYNVILNGFS-RQGRMQEAELIMLKMIERGVNPDRSTYTSLING 718
Query: 447 YCEEGNVENVMQIAHEMVTK 466
+ + N++ ++ EM+ +
Sbjct: 719 HVTQNNLKEAFRVHDEMLQR 738
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 8/277 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNK---LSDFF-ISKLIKAYGDRGNVKAAIFWFHQAK 150
Y I + L ++S A L + DF+ + LI Y GN+ A+ F
Sbjct: 467 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI 526
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
Q + +YN+L+ + + ++ E ++ ++ + P +S Y +I GYC MG +
Sbjct: 527 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS-YGILINGYCNMGCV 585
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A +++D M K ++ NT++ G+C+ G +A + ++ M+ +G P+ +TYN +
Sbjct: 586 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 645
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G +D A L+ KM +G +V T+ +L G G+ +A + ++E +
Sbjct: 646 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 705
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
NPD +Y +ING EA + EM RG P
Sbjct: 706 NPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 125/246 (50%), Gaps = 4/246 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
Y++ +L+ + ++ A F +++ N+ PDV TY T+I G+CK +E +++
Sbjct: 499 FYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL-KPDVVTYNTLIDGFCKGSEMEKVNELW 557
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + PN ++Y +ING+C G + EA + +EM+ +G +T N ++ G C
Sbjct: 558 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 617
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +A ++ M L G + T+ +++ G D+A + + + + PDV +Y
Sbjct: 618 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 677
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V++NGF + G+ EA ++ +M RG+ P ++ ++ V L A + +M Q
Sbjct: 678 NVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 737
Query: 395 MDCLPN 400
+P+
Sbjct: 738 RGFVPD 743
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 176/344 (51%), Gaps = 11/344 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
++ A D+G+V A+ H + + + C + SYN++L L +E ++V
Sbjct: 198 VLNAICDQGSVDKAL---HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV 254
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ PP++ T+ T+I C+ G+ E +V M P++ Y T+I+G CK+G L
Sbjct: 255 R-MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHL 313
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ A + +N M + G +PN + YN ++ GLC R +E + L+A+M + T +
Sbjct: 314 KVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 373
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ C G D+ + L ++ PDV +Y VINGFCK G DEA+ LLK M A G
Sbjct: 374 VDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 433
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KP S+ V + L A L+ QM Q C N +++NT+I LC KG ++
Sbjct: 434 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC-KKGLVEQAI 492
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L+ +M+ +G + D YS ++ G + G + +++ + MV K
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK 536
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 165/305 (54%), Gaps = 5/305 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N+L+ L R + E Q+ E+ PD+ Y T+I G CK G ++ A ++
Sbjct: 262 IVTFNTLISYLCRNGLFERVHEVLAQMA-EHGCTPDIRMYATIIDGICKEGHLKVAHEIL 320
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +KPN++ YNT++ G C EE ++ + EM ++ C +++T+N ++ C N
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G VD L+ +M ++G +V T+ +++ G C G D+AV L+++ P+ SY
Sbjct: 381 GLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+V+ G C + +A L+ +M +G +FN + L + G +++AI LLKQM
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ +SY+T+I GL A G+ + +L++ M+ G + + +YS + EG +
Sbjct: 501 NGCSPDLISYSTVIDGLGKA-GKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRIN 559
Query: 455 NVMQI 459
V+Q+
Sbjct: 560 KVIQM 564
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 170/321 (52%), Gaps = 8/321 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+LL L + EE ++ ++ P D T+ ++ +C+ G+++ ++ + M
Sbjct: 335 YNTLLKGLCSAERWEETEELLAEMFDKDC-PLDDVTFNILVDFFCQNGLVDRVIELLEQM 393
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V P+++ Y T+INGFCK+G ++EA + M GC+PN ++Y ++ GLC R
Sbjct: 394 LVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERW 453
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A+ LM++M G N T +++ LC G +QA+ L+ ++ +PD+ SY V
Sbjct: 454 VDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 513
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K GK+DEA+ LL M +G+ P ++++ L G +++ I + +
Sbjct: 514 IDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTI 573
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ V YN +I LC +G + + + M+ SG + + Y+ L++G EG V+
Sbjct: 574 RSDAVLYNAVISSLC-KRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 632
Query: 458 QIAHEMVTKKGRLLK--LKNF 476
++ E+ + KG L K +K+F
Sbjct: 633 EMLTELCS-KGALRKHLMKHF 652
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 128/270 (47%), Gaps = 1/270 (0%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
Y M+ GYC+ G +E+A+++ + V PN Y ++ C +G + +A ++EM RG
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C P Y+ ++ C G A ++ + G +V +L +C G D+A+
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKAL 212
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
LR++ PDV SY V+ G C + L++EM P + +FN + L
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
NG +R +L QM + C P+ Y TII G+C +G ++ ++++RM G +
Sbjct: 273 CRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGIC-KEGHLKVAHEILNRMPSYGLKPN 331
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ LLKG C E ++ EM K
Sbjct: 332 VVCYNTLLKGLCSAERWEETEELLAEMFDK 361
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 137/269 (50%), Gaps = 8/269 (2%)
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+++IR C G A + ++AYN M+ G+C+ G+LE A++ +
Sbjct: 62 SSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAV---PV 118
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
PN TY ++ LC GR+ +A ++ +M G + +L+ C G F AV
Sbjct: 119 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVR 178
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L ++ DV + +V+N C G D+A+ LL+++ + G +P V S+NAV + L
Sbjct: 179 VLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLC 238
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
L+++M +M C PN V++NT+I LC G + V +++ +M G D
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCR-NGLFERVHEVLAQMAEHGCTPDI 297
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MY+ ++ G C+EG+ +++AHE++ +
Sbjct: 298 RMYATIIDGICKEGH----LKVAHEILNR 322
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 187/405 (46%), Gaps = 42/405 (10%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI-----VKENV-- 189
G V A FH+ + +YNS++ L + ++ AE Q+ ++E V
Sbjct: 153 GEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRL 212
Query: 190 --------VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
+ PDV TY+ +I YCK+G A+ +FD M + P+ Y T+++G+
Sbjct: 213 LKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYAT 272
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
KG L + + M+ G + +N +I N +D+A +MR GF NV T
Sbjct: 273 KGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVT 332
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ LC G+ + AV + ++ ++PD+ ++ +I+G C IG+ + L EM
Sbjct: 333 YTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMI 392
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
RG+ P N + L + G + A Q+ + P+ VSY +I G C+ G+M
Sbjct: 393 NRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCL-DGKM 451
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK----------- 467
+ L+ RM+ G D YS LL GYC+ G V++ + + EM +K
Sbjct: 452 DESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNII 511
Query: 468 -------GRLLKLKNFLTRVVDALLLMW-----IVTGGSWISRFV 500
GR++ + F ++VD+ + + IV GG + FV
Sbjct: 512 LHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFV 556
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 176/342 (51%), Gaps = 6/342 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+Y +LL ++ + ++++ + P + + +IR Y K ++ A F
Sbjct: 261 YTYRTLLHGYATKGALVDMHDLLALMIQDGI-PLEDHVFNILIRAYAKNETLDKAMTAFI 319
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K PN++ Y T+I+ CK G +E+A ++M++ G P+ +T+ ++I+GLC G
Sbjct: 320 EMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIG 379
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ + L +M G N +++ LC G+ +A + ++ + PDV SY
Sbjct: 380 EWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYT 439
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++I+G+C GK DE+I LL M + GL+P +++A+ +NG +D A+ L ++M
Sbjct: 440 ILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSK 499
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
D PN ++YN I+ GL A GR+ + +++ SG L Y+ +L G CE V+
Sbjct: 500 DVKPNAITYNIILHGLFHA-GRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDE 558
Query: 456 VMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWIS 497
+++ + +K+ + L+++ F +V L + I S S
Sbjct: 559 ALRMFQGLRSKEFQ-LEVRTFNIMIVGLLKVGRIGDAKSLFS 599
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 180/382 (47%), Gaps = 57/382 (14%)
Query: 156 ACLYSYNSLLGVLVRVNS-------IKLAEEFFHQI--VKENVVPPDVSTYTTMIRGYCK 206
A ++++N +L V+ +S LA F+ + V N + D T+ +IR +C
Sbjct: 47 ASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNKLATDACTFGILIRCFCN 106
Query: 207 MGMIENAKK-------------VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+G+++ A + D PN+L+YN +ING K+GE+++A +EM+
Sbjct: 107 VGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEML 166
Query: 254 NRGCRPNELTYNAMIYGLC----------------INGRVDEAKMLMAKMRLNGFKDNVS 297
+G PN +TYN++I GLC G+++EA L+ KM G + +V
Sbjct: 167 GQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVV 226
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++ C +G+ +A +++ NPD +Y +++G+ G + LL M
Sbjct: 227 TYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALM 286
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
G+ FN + R +N LD+A+ +M Q PN V+Y T+I LC A GR
Sbjct: 287 IQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKA-GR 345
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT------------ 465
++D +M+ G + D ++ L+ G C G + V +++ EM+
Sbjct: 346 VEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNT 405
Query: 466 ------KKGRLLKLKNFLTRVV 481
K+GR+L+ +F +++
Sbjct: 406 IMDSLCKEGRVLEAHDFFDQII 427
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 214/457 (46%), Gaps = 53/457 (11%)
Query: 75 FNWASNPNPNPNKYHHTTPCYTAITDVLLS--HSLISIAASLLKNSNKLSDFFISKLIKA 132
F+ NP+ Y + T + T L H L+++ ++++ L D + LI+A
Sbjct: 248 FDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLAL---MIQDGIPLEDHVFNILIRA 304
Query: 133 YGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPP 192
Y + A+ F + +Q + +Y +++ +L + ++ A F Q+V E + P
Sbjct: 305 YAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGL-SP 363
Query: 193 DVSTYTTMIRGYC-----------------------------------KMGMIENAKKVF 217
D+ T+T++I G C K G + A F
Sbjct: 364 DIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFF 423
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D + VKP++++Y +I+G+C G+++E+ K + M++ G RP+ +TY+A++ G C N
Sbjct: 424 DQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKN 483
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GRVD+A L +M K N T+ +L GL G+ A + ++++ + + +Y
Sbjct: 484 GRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTY 543
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+V+ G C+ DEA+ + + +R++ + V +FN + L++ G + A L +
Sbjct: 544 NIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILP 603
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+P+ + Y +I + +G +++ ++L M ++G + + +++ E+G+V
Sbjct: 604 SGLVPDAIIYGLMIQS-HIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVR 662
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVT 491
A +TK + K + A+LL+ IV+
Sbjct: 663 R----AGTYLTK----IDEKEYSVEASTAVLLISIVS 691
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 202/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++ D+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQ-EG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 393
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 171/324 (52%), Gaps = 19/324 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR--------------GYCK 206
YN+++ +L + + + + +++ + + P DV TY T+I G+
Sbjct: 42 YNTIIDILCKDKLVSDGCDLYSEMIDKKIYP-DVVTYNTLIYSLLNFVYIKIRKEYGFSI 100
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+G ++ A + + MT V PN+ + T+++G CK GE+++A+ + M+ + PN +T
Sbjct: 101 LGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVT 160
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YN+++ G + V++AK L + L G NV ++K M+ GLC D+A + +
Sbjct: 161 YNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMH 220
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
NM PD +Y +I+G CK + + + EM RG + ++N++ L +N ++D
Sbjct: 221 SKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVD 280
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+AI LL ++ PN +Y ++ GLC GR++D +++ ++ G+ LD +Y+ +
Sbjct: 281 KAITLLTKIKNQGIRPNIYTYTILVDGLC-KNGRLRDAQEVYQDLLNKGYQLDARIYTVM 339
Query: 444 LKGYCEEGNVENVMQIAHEMVTKK 467
+ G C+EG ++ + + +M K
Sbjct: 340 INGLCKEGFLDEALSLLSKMEDNK 363
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 153/296 (51%), Gaps = 6/296 (2%)
Query: 121 LSDFFISKLIKAYGDR--GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAE 178
L +F K+ K YG G +K A+ +Q + ++ +L+ L + +K A
Sbjct: 84 LLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKAR 143
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMING 235
++K+ V P++ TY +++ GY + + AK++F+ ++++ PN+ +Y MING
Sbjct: 144 NVLAIMIKQRV-EPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMING 202
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
CK ++EA EM ++ P+ + YN++I GLC + R+ + + +M G N
Sbjct: 203 LCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPAN 262
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
+ T+ S+L GLC + D+A+ L + + P++ +Y ++++G CK G+ +A + +
Sbjct: 263 IITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQ 322
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
++ +G + + + L + G LD A+ LL +M C P+ V+Y I L
Sbjct: 323 DLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRAL 378
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 121/223 (54%), Gaps = 4/223 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ V + A++ F+ I + P +V +Y MI G CK M++ A +F
Sbjct: 160 TYNSLMDGYFLVKEVNKAKQLFNTISLRGMTP-NVRSYKVMINGLCKNKMVDEAANLFKE 218
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+ +AYN++I+G CK + + + EM +RG N +TYN+++ GLC N +
Sbjct: 219 MHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQ 278
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A L+ K++ G + N+ T+ ++ GLC G+ A ++++ D + Y V
Sbjct: 279 VDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTV 338
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ING CK G DEA+SLL +M P ++ R L E+
Sbjct: 339 MINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFES 381
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 106/284 (37%), Gaps = 95/284 (33%)
Query: 270 GLCINGRVDEAKMLMAKMRLNGF----------KDNVSTHKSMLKGLC------------ 307
GLC+NG V +A + GF K +V + +++ LC
Sbjct: 3 GLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCDLY 62
Query: 308 -------------------------------------VVGKFDQAVGYLRNVMEANMNPD 330
++G+ +AVG L + + P+
Sbjct: 63 SEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPN 122
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEM--------------------------------- 357
++++ +++G CK G+ +A ++L M
Sbjct: 123 IRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFN 182
Query: 358 --RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
RG+ P V S+ + L +N +D A L K+M + +P+ V+YN++I GLC ++
Sbjct: 183 TISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSR 242
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
R+ DV D + M G + Y+ LL G C+ V+ + +
Sbjct: 243 -RIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITL 285
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 31/172 (18%)
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMN----------PDVKSYEVVINGFCKIGKSDEAIS 352
+KGLC+ G+ +A+ + +V+ + PDV Y +I+ CK +
Sbjct: 1 MKGLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCD 60
Query: 353 LLKEMRARGLKPTVFSFNAV-----------------FRILVENGELDRAILLLKQMPQM 395
L EM + + P V ++N + F IL G++ A+ LL QM
Sbjct: 61 LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSIL---GQMKEAVGLLNQMTSK 117
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
PN ++ T++ GLC G ++ +++ MI+ + Y+ L+ GY
Sbjct: 118 TVTPNIRTFTTLVDGLC-KDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGY 168
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 177/356 (49%), Gaps = 13/356 (3%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+L KLS + L+ + G + A+ H+ + I L +Y+ +
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GA 452
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYN 230
++ A E + ++ + + P + +I G + G I A+ FD +T V ++ YN
Sbjct: 453 VEEAIELYEEMCSKRIYPNSFVC-SAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYN 511
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
MI+G+ K G + EA + +++ +G P +T+N++IYG C G++ EA L+ ++++
Sbjct: 512 IMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVH 571
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G T+ +++ G C G L + + P +Y VV+ G CK G+ E+
Sbjct: 572 GLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHES 631
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+ LLK M ARGL P ++N V + + +L +A L QM Q P+ V+YN +I G
Sbjct: 632 VQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLING 691
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC+ G ++D + L+ + L Y+ ++K +C +G+V+N + H+MV +
Sbjct: 692 LCV-YGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVER 746
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 175/376 (46%), Gaps = 48/376 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + ++ A+ + + E G + S+N+L+ ++ S+ +A+ FF ++K
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
++ PDV +Y ++ G C G +E A + + M V+P+++ YN + NGF G + A
Sbjct: 301 LL-PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + M+ G P+ +TY +I G C G ++E+ L KM G K ++ T+ +L
Sbjct: 360 WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSS 419
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ D+AV L + + PD+ +Y G +EAI L +EM ++ + P
Sbjct: 420 LCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPN 471
Query: 366 VFSFNAVFRILVENGELDRAILLL-----------------------------------K 390
F +A+ L E G + A + K
Sbjct: 472 SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 531
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
Q+ + P V++N++I G C KG++ + L+D + G Y+ L+ GYCEE
Sbjct: 532 QIIEKGISPTIVTFNSLIYGFC-KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEE 590
Query: 451 GNVENVMQIAHEMVTK 466
G++ ++ + HEM K
Sbjct: 591 GDMHSMFDMLHEMEAK 606
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 182/366 (49%), Gaps = 34/366 (9%)
Query: 132 AYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP 191
AY V A+F + K + + +YNSLL + + + +++I K + VP
Sbjct: 177 AYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLL---YNLRHTDIMWDVYNEI-KASGVP 232
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKC 248
+ T +I G C+ +++A P+++++N +++GFCK G ++ AK
Sbjct: 233 QNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSF 292
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M+ G P+ +YN +++GLC+ G ++EA M +G + ++ T+ + G +
Sbjct: 293 FCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRI 352
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+G A ++ ++ +NPD+ +Y ++I G C++G +E+ L ++M ++GLK ++ +
Sbjct: 353 LGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVT 412
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY----------------------NT 406
+ + L ++G +D A++LL +M + P+ ++Y N+
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNS 472
Query: 407 IICGLCMA----KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+C ++ KG + + + D + +S + +Y+ ++ GY + GN+ ++ +++
Sbjct: 473 FVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVR-SYK 531
Query: 463 MVTKKG 468
+ +KG
Sbjct: 532 QIIEKG 537
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 94/189 (49%), Gaps = 4/189 (2%)
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMING 235
+ H++ + + P + TYT +++G CK G + + ++ M + P+ + YNT+I
Sbjct: 598 DMLHEMEAKAIKPTQI-TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQS 656
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
FCK +L++A + N+M+ +P+ +TYN +I GLC+ G + +A L+ ++ +
Sbjct: 657 FCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLT 716
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
+ +++K C G A+ + ++E ++ Y VIN CK +A
Sbjct: 717 KVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFC 776
Query: 356 EMRARGLKP 364
M G+ P
Sbjct: 777 MMLTHGIPP 785
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKC 248
PD TY T+I+ +CK ++ A ++ + M +++P+ + YN +ING C G L++A +
Sbjct: 645 PDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRL 704
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ + ++ R ++ Y +I C G V A + +M GF+ ++ + +++ LC
Sbjct: 705 LVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCK 764
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
A + ++ + PD V++N F + G + + M GL P
Sbjct: 765 RNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 113 SLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+L S +L+ + +IKA+ +G+V+ A+ +FHQ + + Y++++ L + N
Sbjct: 707 TLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRN 766
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL 227
I A+ FF ++ +PPD M+ + + G + ++F M +K LL
Sbjct: 767 LITDAKFFFCMMLTHG-IPPDQDICLVMLNAFHRSGDPNSVFEIF-AMMIKCGLL 819
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 178/332 (53%), Gaps = 6/332 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G + AI F + K+I L YN+++ L + + A ++V EN + DV +
Sbjct: 189 GKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMV-ENGIELDVYS 247
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
Y +MI G+C +G + A K+ D M V+ P++ +N +I+G CK G + EA + M
Sbjct: 248 YNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVM 307
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ RG +P+ ++YNA++ G C++G V EAK + KM NV ++ +++ G C V
Sbjct: 308 IKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMV 367
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D+A+ L + N+ PD +Y +++G K G+S L++ MRA G + ++N +
Sbjct: 368 DEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVL 427
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
++ + D+A+ L + + ++ PN +YN ++ GLC + GR++ +++ + G
Sbjct: 428 LDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKS-GRLKYAKEIFQLLSAKG 486
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ Y+ ++ G C+EG ++ + ++MV
Sbjct: 487 CQPNIRTYNIMIHGLCKEGFLDEAEALLYKMV 518
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 173/324 (53%), Gaps = 13/324 (4%)
Query: 95 YTAITDVLLSHSLISIAASL----LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y + D L L+ A L ++N +L + + +I + G +AA+ +
Sbjct: 213 YNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDE-- 270
Query: 151 QIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ G +Y++N L+ L ++ + A ++K PD+ +Y ++ GYC
Sbjct: 271 MVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGW-KPDIVSYNALMNGYCLS 329
Query: 208 GMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G + AK+VFD M T PN+++Y T+ING+CK ++EA + EM N+ P+ +TY
Sbjct: 330 GSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTY 389
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N ++ GL +GR L+ MR +G ++ T+ +L KFD+A+ ++++E
Sbjct: 390 NCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIE 449
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
++P++++Y ++++G CK G+ A + + + A+G +P + ++N + L + G LD
Sbjct: 450 IGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDE 509
Query: 385 AILLLKQMPQMDCLPNFVSYNTII 408
A LL +M + LPN+++++TI+
Sbjct: 510 AEALLYKMVNNNYLPNYITFDTIV 533
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 130/247 (52%), Gaps = 2/247 (0%)
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
T+KP+L+ ++ +IN F + G++ A + ++ G + + ++ GLC+ GRV EA
Sbjct: 100 TIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEA 159
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
L+ + GF+ + + +++ GLC +GK A+ + + + P++ Y VI+G
Sbjct: 160 VSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDG 219
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM-PQMDCLP 399
CK G DEA L EM G++ V+S+N++ G A+ LL +M + P
Sbjct: 220 LCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYP 279
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ ++N +I GLC GR+ + ++V MI+ G D Y+ L+ GYC G+V Q+
Sbjct: 280 DVYTFNILIDGLC-KLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQV 338
Query: 460 AHEMVTK 466
+MV +
Sbjct: 339 FDKMVER 345
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 193/409 (47%), Gaps = 10/409 (2%)
Query: 65 QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA----ASLLKNSNK 120
++ P A+ FN A++ P T+ Y + D +A LL+ +
Sbjct: 97 RSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLR 156
Query: 121 LSDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
++ + L++ + + A+ H+ ++ ++SY+ LL L A++
Sbjct: 157 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 216
Query: 180 FFHQIVKENVV-PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING 235
+ + V P+V Y T+I G+ K G + A +F M + P+L+ YN++++
Sbjct: 217 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 276
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
CK +++A+ + +M+N+ PN TYN +IYG G+ EA + +MR + +
Sbjct: 277 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 336
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V T ++ LC GK +A + NPDV SY +++NG+ G + L
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 396
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
M G+ P ++FN + + G LD+A+++ +M P+ V+Y T+I LC
Sbjct: 397 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI- 455
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G+M D + ++MI G D Y+CL++G+C G++ ++ E++
Sbjct: 456 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM 504
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 170/340 (50%), Gaps = 5/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I + G+V A F + Q L +YNS++ L + ++ AE F Q+V +
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
V+P + TY +I GY G + A +VF M ++ P+++ + ++ CK G+++EA
Sbjct: 298 VLPNN-WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 356
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + M +G P+ +YN M+ G G + + L M +G + T ++K
Sbjct: 357 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 416
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
G D+A+ + + + PDV +Y VI C+IGK D+A+ +M +G+ P
Sbjct: 417 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 476
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+++N + + +G L +A L+ ++ + V +++II LC GR+ D +++
Sbjct: 477 KYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL-GRVMDAQNIF 535
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
D + G + D +YS L+ GYC G +E +++ MV+
Sbjct: 536 DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 575
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 195/381 (51%), Gaps = 9/381 (2%)
Query: 123 DFF-ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
DF+ + LIKAY + G + A+ F++ + + +Y +++ L R+ + A E F
Sbjct: 406 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 465
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-DVMT--VKPNLLAYNTMINGFCK 238
+Q++ + V P D Y +I+G+C G + AK++ ++M + +++ ++++IN CK
Sbjct: 466 NQMIDQGVAP-DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 524
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G + +A+ + +N G P+ + Y+ ++ G C+ G++++A + M G + NV
Sbjct: 525 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 584
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ G C +G+ D+ + R +++ + P Y ++I+G + G++ A EM
Sbjct: 585 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMT 644
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
G+ + ++N V R L +N D AI L K++ M+ N ++ NT+I G+ + R+
Sbjct: 645 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR-RV 703
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLT 478
++ +DL + RS + YS ++ +EG VE + M + L
Sbjct: 704 EEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSM--QNAGCEPNSRLLN 761
Query: 479 RVVDALLLM-WIVTGGSWISR 498
VV LL IV G+++S+
Sbjct: 762 HVVRELLKKNEIVRAGAYLSK 782
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 164/324 (50%), Gaps = 5/324 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+S L+ + G +K A F ++SYN +L + + F ++
Sbjct: 340 LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML 399
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ + P D T+ +I+ Y GM++ A +F+ M VKP+++ Y T+I C+ G++
Sbjct: 400 GDGIAP-DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 458
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A + N+M+++G P++ YN +I G C +G + +AK L++++ NG ++ S+
Sbjct: 459 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 518
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ LC +G+ A + ++PD Y ++++G+C +GK ++A+ + M + G+
Sbjct: 519 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 578
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+P V + + + G +D + L ++M Q P+ + Y+ II GL A GR +
Sbjct: 579 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQA-GRTVPAK 637
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKG 446
M SG +D Y+ +L+G
Sbjct: 638 MKFHEMTESGIAMDICTYNIVLRG 661
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 39/272 (14%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
++S++ L ++ + A+ F V + PD Y+ ++ GYC +G +E A +VFD M
Sbjct: 515 FSSIINNLCKLGRVMDAQNIFDLTVNVGL-HPDAVVYSMLMDGYCLVGKMEKALRVFDAM 573
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
++PN++ Y T++NG+CK G ++E EM+ RG +P+ + Y+ +I GL GR
Sbjct: 574 VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRT 633
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN--------- 328
AKM +M +G ++ T+ +L+GL FD+A+ + + N+
Sbjct: 634 VPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 693
Query: 329 --------------------------PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
P+V +Y ++I K G +EA + M+ G
Sbjct: 694 IDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 753
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+P N V R L++ E+ RA L ++ +
Sbjct: 754 EPNSRLLNHVVRELLKKNEIVRAGAYLSKIDE 785
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 8/231 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQ--IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L+ Y G + + F + Q I+ LYS ++ L + A+ FH++
Sbjct: 588 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI--IIDGLFQAGRTVPAKMKFHEMT- 644
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELE 243
E+ + D+ TY ++RG K + A +F M VK N++ NTMI+G + +E
Sbjct: 645 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 704
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EAK + PN +TY+ MI L G V+EA+ + + M+ G + N ++
Sbjct: 705 EAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVV 764
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+ L + +A YL + E N + + + ++++ F G E I L
Sbjct: 765 RELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++P +Y ++++ + + + A++ ++ GL+ + N + E D A+
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179
Query: 387 -LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH--NLDFTMYSCL 443
+LL + P++ C+P+ SY+ ++ LC +G+ +DL+ M G + + Y+ +
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLC-DQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 238
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+ G+ +EG+V + EMV +
Sbjct: 239 IDGFFKEGDVNKACDLFKEMVQR 261
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 193/409 (47%), Gaps = 10/409 (2%)
Query: 65 QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA----ASLLKNSNK 120
++ P A+ FN A++ P T+ Y + D +A LL+ +
Sbjct: 87 RSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLR 146
Query: 121 LSDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
++ + L++ + + A+ H+ ++ ++SY+ LL L A++
Sbjct: 147 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 206
Query: 180 FFHQIVKENVV-PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING 235
+ + V P+V Y T+I G+ K G + A +F M + P+L+ YN++++
Sbjct: 207 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 266
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
CK +++A+ + +M+N+ PN TYN +IYG G+ EA + +MR + +
Sbjct: 267 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 326
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V T ++ LC GK +A + NPDV SY +++NG+ G + L
Sbjct: 327 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 386
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
M G+ P ++FN + + G LD+A+++ +M P+ V+Y T+I LC
Sbjct: 387 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI- 445
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G+M D + ++MI G D Y+CL++G+C G++ ++ E++
Sbjct: 446 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM 494
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 177/375 (47%), Gaps = 38/375 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I + G+V A F + Q L +YNS++ L + ++ AE F Q+V +
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287
Query: 189 VVP----------------------------------PDVSTYTTMIRGYCKMGMIENAK 214
V+P PDV T + ++ CK G I+ A+
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 347
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
VFD M +K P++ +YN M+NG+ KG L + + M+ G P+ T+N +I
Sbjct: 348 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 407
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
G +D+A ++ +MR +G K +V T+++++ LC +GK D A+ +++ + PD
Sbjct: 408 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 467
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I GFC G +A L+ E+ G+ + F+++ L + G + A +
Sbjct: 468 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 527
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ P+ V YN ++ G C+ G+M+ + D M+ +G + Y L+ GYC+ G
Sbjct: 528 TVNVGLHPDAVVYNMLMDGYCLV-GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 586
Query: 452 NVENVMQIAHEMVTK 466
++ + + EM+ +
Sbjct: 587 RIDEGLSLFREMLQR 601
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 210/437 (48%), Gaps = 27/437 (6%)
Query: 75 FNWASNPNPNPNKYHH--------TTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFF- 125
F+ + NP+ + + T C +TD+ L+ DF+
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF----------DLMLGDGIAPDFYT 399
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ LIKAY + G + A+ F++ + + +Y +++ L R+ + A E F+Q++
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 459
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-DVMT--VKPNLLAYNTMINGFCKKGEL 242
+ V P D Y +I+G+C G + AK++ ++M + +++ ++++IN CK G +
Sbjct: 460 DQGVAP-DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+A+ + +N G P+ + YN ++ G C+ G++++A + M G + NV + ++
Sbjct: 519 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 578
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G C +G+ D+ + R +++ + P Y ++I+G + G++ A EM G+
Sbjct: 579 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGI 638
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+ ++N V R L +N D AI L K++ M+ N ++ NT+I G+ + R+++ +
Sbjct: 639 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR-RVEEAK 697
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVD 482
DL + RS YS ++ +EG VE + M + L VV
Sbjct: 698 DLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM--QNAGCEPNSRLLNHVVR 755
Query: 483 ALLLM-WIVTGGSWISR 498
LL IV G+++S+
Sbjct: 756 ELLKKNEIVRAGAYLSK 772
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 142/325 (43%), Gaps = 9/325 (2%)
Query: 75 FNWASNPNPNPNKYHHT--TPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKA 132
FN + P+KY + + +L + LIS ++ N L F S +I
Sbjct: 455 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELIS---EIMNNGMHLDIVFFSSIINN 511
Query: 133 YGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPP 192
G V A F + YN L+ V ++ A F +V + P
Sbjct: 512 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI-EP 570
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCM 249
+V Y T++ GYCK+G I+ +F M +KP+ + Y+ +I+G + G AK
Sbjct: 571 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKF 630
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+EM G + TYN ++ GL N DEA L ++R K N+ T +M+ G+
Sbjct: 631 HEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQT 690
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ ++A ++ + + P V +Y ++I K G +EA + M+ G +P
Sbjct: 691 RRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLL 750
Query: 370 NAVFRILVENGELDRAILLLKQMPQ 394
N V R L++ E+ RA L ++ +
Sbjct: 751 NHVVRELLKKNEIVRAGAYLSKIDE 775
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 8/231 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQ--IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L+ Y G + + F + Q I+ LYS ++ L A+ FH++
Sbjct: 578 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI--IIDGLFEAGRTVPAKMKFHEMT- 634
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELE 243
E+ + D+ TY ++RG K + A +F M VK N++ NTMI+G + +E
Sbjct: 635 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 694
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EAK + P+ +TY+ MI L G V+EA+ + + M+ G + N ++
Sbjct: 695 EAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVV 754
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+ L + +A YL + E N + + + ++++ F G E I L
Sbjct: 755 RELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++P +Y ++++ + + + A++ ++ GL+ + N + E D A+
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169
Query: 387 -LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH--NLDFTMYSCL 443
+LL + P++ C+P+ SY+ ++ LC +G+ +DL+ M G + + Y+ +
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLC-DQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 228
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+ G+ +EG+V + EMV +
Sbjct: 229 IDGFFKEGDVNKACDLFKEMVQR 251
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 219/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN++ + M+
Sbjct: 301 HCKSGNLDAAADVLKAMI 318
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQASKAETLVRQLMKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN ++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 189/367 (51%), Gaps = 16/367 (4%)
Query: 110 IAASLLKNSNKLSDF-----------FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL 158
+ A+ LK S ++ DF S +I A+ AI F + +++ +
Sbjct: 232 VKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNV 291
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+YN+++ L + + A F ++VKE V P + TY+ I G K+ I+ A V
Sbjct: 292 VTYNNIIHGLCKSGRLDEAYRFKEKMVKEKV-SPSLITYSVFINGLIKLEKIDEANCVLK 350
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M+ PN + YNT+I+G+CK G + EA K ++M+++G PN +T N++I G C +
Sbjct: 351 EMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSD 410
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++ +A+ ++ +M G N + ++ LC+ +F A+ ++R ++ N+ P+
Sbjct: 411 QIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLT 470
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++G CK GK EA+ L + +G P + + NA+ L + G + + LL+ M +
Sbjct: 471 TLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLER 530
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ + ++YNT+I G C +G++++ +L + M++ G D ++ LL G C ++
Sbjct: 531 GLVFDRITYNTLISGCC-KEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDE 589
Query: 456 VMQIAHE 462
++ HE
Sbjct: 590 ASRLWHE 596
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 169/347 (48%), Gaps = 40/347 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y+ + L+++ I A ++ + VP +V Y T+I GYCKMG I A K+
Sbjct: 326 LITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEV-VYNTLIDGYCKMGNISEALKIR 384
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC----------------- 257
D M K PN + N++I GFCK ++ +A+ + EM+ RG
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLK 444
Query: 258 ------------------RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
RPN+ ++ GLC G+ EA L ++ GF N+ T
Sbjct: 445 FRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTS 504
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ GLC G + + LR+++E + D +Y +I+G CK GK E L +EM
Sbjct: 505 NALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVK 564
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G++P +++FN + L ++D A L + + +PN +Y +I G C A +++
Sbjct: 565 KGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKAN-KVE 623
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E+L++ ++ L+ +Y+ L++ YC GN+ ++ +M ++
Sbjct: 624 EGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSR 670
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 151/290 (52%), Gaps = 5/290 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + +K E ++VK+ + PD+ T+ ++ G C I+ A +++
Sbjct: 538 TYNTLISGCCKEGKVKEGFELKEEMVKKGI-QPDIYTFNLLLHGLCNADKIDEASRLWHE 596
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
PN+ Y MI+G+CK ++EE + +NE++++ N + YN++I CING
Sbjct: 597 CKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGN 656
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ A L M+ G + +T+ S++ GLC +G D A L + + + P+V Y
Sbjct: 657 MNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTT 716
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G+ K+G+ ++ +L+EM + + P F++ + + G+ A LL +M +
Sbjct: 717 IIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKG 776
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
LP+ V+YN GLC +G++++ + D M LD Y+ L+ G
Sbjct: 777 ILPDAVTYNAFTNGLC-KEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 162/339 (47%), Gaps = 40/339 (11%)
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV 222
+L+ L + A E + +++ + VP ++ T +I G CK G ++ K+ M
Sbjct: 471 TLVSGLCKAGKQGEAVELWCRLLGKGFVP-NIVTSNALIHGLCKAGNMQETLKLLRDMLE 529
Query: 223 KP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+ + + YNT+I+G CK+G+++E + EM+ +G +P+ T+N +++GLC ++DE
Sbjct: 530 RGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDE 589
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME--------------- 324
A L + + NG+ NV T+ M+ G C K ++ L ++
Sbjct: 590 ASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIR 649
Query: 325 -----ANMNP------DVKS---------YEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
NMN D+KS Y +++G C IG D+A LL EMR GL P
Sbjct: 650 AYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLP 709
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
V + + + G++++ ++L++M + PN +Y +I G C G+ ++ L
Sbjct: 710 NVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKL-GKTKEAAKL 768
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ M G D Y+ G C+EG VE ++ EM
Sbjct: 769 LNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEM 807
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 148/290 (51%), Gaps = 5/290 (1%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMI 233
A F +++ N+ P D TT++ G CK G A +++ + K PN++ N +I
Sbjct: 450 ALHFIREMLLRNLRPND-GLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALI 508
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G CK G ++E K + +M+ RG + +TYN +I G C G+V E L +M G +
Sbjct: 509 HGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQ 568
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
++ T +L GLC K D+A + P+V +Y V+I+G+CK K +E +L
Sbjct: 569 PDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENL 628
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
L E+ ++ L+ +N++ R NG ++ A L M L + +Y++++ GLC
Sbjct: 629 LNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCN 688
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + D + L+D M + G + Y+ ++ GY + G + V + EM
Sbjct: 689 I-GLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEM 737
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 186/433 (42%), Gaps = 53/433 (12%)
Query: 40 NISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAIT 99
++S Q D L L SN+ NP AL FF++ S K+ T Y +
Sbjct: 81 HLSPQEFDSCFLALKSNV---------NPKTALNFFHFVSETC----KFRFTARSYCVLI 127
Query: 100 DVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLY 159
+L+ + L+S A LL +LI G V A +++ E +
Sbjct: 128 HLLVGNDLLSPARLLL-----------IRLID-----GKVPAFYARNFESRHFEIAQIMA 171
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+N V V +K+A+ H Y+T + + G A VF +
Sbjct: 172 DFNL---VFEPVIGVKIADLLVH-------------VYSTQFK-HLGFGF---AADVFSL 211
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ K P+L +++ K EL+++ + + + G P+ ++ MI C R
Sbjct: 212 LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHR 271
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D+A L +KM G NV T+ +++ GLC G+ D+A + +++ ++P + +Y V
Sbjct: 272 EDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSV 331
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
ING K+ K DEA +LKEM G P +N + + G + A+ + M
Sbjct: 332 FINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKG 391
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V+ N++I G C + ++ E++++ MI G ++ +S ++ C +
Sbjct: 392 ISPNSVTLNSLIQGFCKSD-QIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTA 450
Query: 457 MQIAHEMVTKKGR 469
+ EM+ + R
Sbjct: 451 LHFIREMLLRNLR 463
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 10/192 (5%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS---YNSLLGVLVRVNSIKL 176
+L+ + LI+AY GN+ AA F +++ L S Y+SL+ L + +
Sbjct: 638 ELNSVVYNSLIRAYCINGNMNAA---FRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDD 694
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
A+ ++ KE ++ P+V YTT+I GY K+G + V M+ + PN Y MI
Sbjct: 695 AKHLLDEMRKEGLL-PNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMI 753
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+GFCK G+ +EA K +NEM +G P+ +TYNA GLC G+V+EA + +M
Sbjct: 754 DGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVC 813
Query: 294 DNVSTHKSMLKG 305
+ T+ +++ G
Sbjct: 814 LDEITYTTLIDG 825
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 222/457 (48%), Gaps = 22/457 (4%)
Query: 22 TSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASN- 80
T I VIQ L N S ++ S+ + S + SN+ VI NP H L+FF+WAS
Sbjct: 29 TLIHDVIQILKT-NQSHHSLQSRFAE--SQIIVSNVAHFVIDRIHNPQHGLYFFHWASTL 85
Query: 81 PNPNPNKYHHTTPCYTAITDVLLSHSL---ISIAASLLKNSN-KLSDFFISKLIKAYGDR 136
P +P Y+++ +++ + L I I +KN N K + ++ +I Y +
Sbjct: 86 PFSSP----LNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEY 141
Query: 137 GNVKAAIFWFHQAKQIENG-ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK---ENVVPP 192
G V A+ F+ ++ N C+ + NSLL LV+ + +A E + ++++ ++ +
Sbjct: 142 GFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDL 201
Query: 193 DVSTYTTMI--RGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKK 247
V Y+ +I +G C +G +E +K+ D PN++ YN +I+G+CKKG+L+ A +
Sbjct: 202 VVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATR 261
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
E+ +G P TY A+I G C G+ L+ +M + G NV S++
Sbjct: 262 VFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKY 321
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G D+A +R + E PD+ +Y ++IN C G+ EA L+ + R L P F
Sbjct: 322 KYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKF 381
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
S+ + + G+ A +L ++ + P+ VSY I G +A G + + ++
Sbjct: 382 SYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHG-SVAGGEIDVALMVREK 440
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M+ G D +Y+ L+ G C++G + EM+
Sbjct: 441 MMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEML 477
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 144/298 (48%), Gaps = 5/298 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG-MIENAKKVFD 218
+YN L+ IK AEEF + KE + P+ +YT ++ YCK G + + +F
Sbjct: 347 TYNILINFSCSGGRIKEAEEFLER-AKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFK 405
Query: 219 VMTV--KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ KP+L++Y I+G GE++ A +MM +G P+ YN ++ GLC GR
Sbjct: 406 IAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGR 465
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
AK+L+++M + + + +++ G + D+A VM ++P V Y V
Sbjct: 466 FPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNV 525
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK GK +A+S + +M+ P ++ + V V+ +LD A+ + QM +
Sbjct: 526 MIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQK 585
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN V+Y ++I G C M E + M + Y+ L+ G+ + G E
Sbjct: 586 YKPNVVAYTSLINGFCKI-ADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPE 642
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 169/392 (43%), Gaps = 50/392 (12%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + L+ AY +G+ A + + + L SY + + V I +A +
Sbjct: 381 FSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREK 440
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKG 240
++++ V P D Y ++ G CK G AK + M ++P+ Y T+++GF +
Sbjct: 441 MMEKGVFP-DAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNN 499
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
EL++A + +M++G P + YN MI GLC G++ +A + KM++ + TH
Sbjct: 500 ELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHS 559
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G D A+ +M+ P+V +Y +INGFCKI A + + M++
Sbjct: 560 TVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSF 619
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL--------- 411
L+P V ++ + + G+ ++A + M +CLPN +++ +I GL
Sbjct: 620 NLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLL 679
Query: 412 ------------------------------------CMAKGRMQDVEDLVD-RMIRSGHN 434
C+ K M D L+ +M+R G
Sbjct: 680 IEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFL 739
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+D +S LL G C+ G + I +TK
Sbjct: 740 MDSVCFSALLHGLCQTGKSKEWRNIISGDLTK 771
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 59/280 (21%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IK G + A+ + ++ K + Y++++++ V+ + + A + F Q++K+
Sbjct: 526 MIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQK 585
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
P+V YT++I G+CK+ + A+KVF M ++PN++ Y +I GF K G+ E+A
Sbjct: 586 Y-KPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKA 644
Query: 246 KKCMNEMMNRGCRPNELT------------------------------------------ 263
M+ C PN+ T
Sbjct: 645 ASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWS 704
Query: 264 -----YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
YN++I LC +G VD A++L KM GF + ++L GLC GK +
Sbjct: 705 QVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKE---- 760
Query: 319 LRNVMEANMNP-DVKS---YEVVINGFCKIGKSDEAISLL 354
RN++ ++ D ++ Y + ++ + GK EA +L
Sbjct: 761 WRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEASYIL 800
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 90/190 (47%), Gaps = 16/190 (8%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N + S+LK + F + L ++ N P +++ VI + + G D+A+ +
Sbjct: 92 NNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMF 151
Query: 355 KEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ------MDCLPNFVSYNTI 407
+ P V + N++ LV+NG++D A L +M + +D + + S +
Sbjct: 152 YMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIV 211
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ GLC G++++ L+D +G + Y+ ++ GYC++G+++ ++ E
Sbjct: 212 VKGLCDV-GKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEE----- 265
Query: 468 GRLLKLKNFL 477
LKLK FL
Sbjct: 266 ---LKLKGFL 272
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 167/313 (53%), Gaps = 5/313 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+ +++ R + A +F ++ K + D TYT +I G C+ G ++ A++V M
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAA-DGVTYTALINGLCRAGELKEAERVLQEM 416
Query: 221 TVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K + + Y +I+G+CK G++ EA N+M+ + PN +TY A+ GLC G V
Sbjct: 417 EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDV 476
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A L+ +M G + N+ T+ S++ GLC G +QA+ + ++ EA + PDV +Y +
Sbjct: 477 CAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTI 536
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I C+ + D A SLL+EM +G+KPT+ ++N + +G ++ LL+ M + +
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +YN+++ C+ K M+ ++ M+ + Y+ L+KG+C+ N++ +
Sbjct: 597 HPNTTTYNSLMKQYCIEKN-MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL 655
Query: 458 QIAHEMVTKKGRL 470
EM+ K RL
Sbjct: 656 YFHSEMIEKGFRL 668
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 151/298 (50%), Gaps = 7/298 (2%)
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPN 225
VL R+ + A + F ++ ++N +Y +++ C G I++A ++FD M P+
Sbjct: 231 AVLCRL-PLDEAVQLFQELPEKNTC-----SYNILLKALCTAGRIKDAHQLFDEMASPPD 284
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++ Y M++G+C ELE A K ++EM RG N + Y ++I LC G+V +A ++
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVE 344
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
M ++G + + +++ G C G A + + + + D +Y +ING C+ G
Sbjct: 345 DMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAG 404
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ EA +L+EM +GL ++ + + G++ A L+ +M Q PN V+Y
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYT 464
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ GLC +G + +L+ M G L+ Y+ L+ G C+ GN+E M+ +M
Sbjct: 465 ALSDGLC-KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 130/267 (48%), Gaps = 4/267 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A ++ Q + +Y +L L + + A E H++ +
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ ++ TY ++I G CK G +E A + D +KP++ Y T+I C+ EL+ A
Sbjct: 491 L-ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ EM+++G +P +TYN ++ G C++GRV+ K L+ M N +T+ S++K
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C+ + ++ + P+ +Y ++I G CK EA+ EM +G + T
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 366 VFSFNAVFRILVENGELDRAILLLKQM 392
S+NA+ R+L + + A L ++M
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 10/241 (4%)
Query: 136 RGNVKAAIFWFHQ--AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
+G+V AA H+ +K +E +++YNSL+ L + +++ A + E + PD
Sbjct: 473 QGDVCAANELLHEMCSKGLELN--IFTYNSLINGLCKAGNLEQAMRTMIDM-DEAGLKPD 529
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMN 250
V TYTT+I C+ ++ A + M +KP ++ YN ++NGFC G +E K+ +
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M+ + PN TYN+++ CI + + M N +T+ ++KG C
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL--KPTVFS 368
+A+ + ++E SY +I K K EA L ++MR L +P V++
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYN 709
Query: 369 F 369
F
Sbjct: 710 F 710
>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 484
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 220/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV-VINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P S + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIIMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN++I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNSMIEYLC-NNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 150/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D ++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIIMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN++ + M+
Sbjct: 301 HCKSGNLDAAADVLKAMI 318
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNSMIEYLCNNGQASKAETLVRQLMKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN ++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 158/276 (57%), Gaps = 3/276 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
P+ TY ++ G C+MG ++ A+ + + + PN++ +NT+ING+ +G L+EAK M+E
Sbjct: 320 PNSFTYGVLMHGLCRMGKVDEARMLLNKVP-NPNVVLFNTLINGYVSRGRLDEAKAVMHE 378
Query: 252 -MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M++ GC P+ TYN +I GLC G + A+ LM +M++ G + NV T+ ++ C G
Sbjct: 379 SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 438
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ ++A L + + + Y +I+ CK K +A+++ +M ++G KP +F+FN
Sbjct: 439 RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 498
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
++ L + + + A+ L + M + N ++YNT+I + +G MQ+ LV+ M+
Sbjct: 499 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF-LRRGAMQEALKLVNDMLF 557
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G LD Y+ L+K C GN+E + + +M++K
Sbjct: 558 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 593
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 161/306 (52%), Gaps = 4/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N+L+ V + A+ H+ + PD+ TY T+I G CK G + +A+++ + M
Sbjct: 356 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 415
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+K PN++ Y +I+ FCK+G LEEA+ ++EM +G N + YN +I LC + +V
Sbjct: 416 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 475
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A + M G K ++ T S++ GLC V KF++A+G ++++ + + +Y +
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ F + G EA+ L+ +M RG ++N + + L G +++ + L + M
Sbjct: 536 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 595
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +S N +I GLC G +Q + + MI G D Y+ L+ G C+ G + +
Sbjct: 596 NPNNISCNILINGLCRT-GNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654
Query: 458 QIAHEM 463
+ ++
Sbjct: 655 NLFDKL 660
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 158/312 (50%), Gaps = 10/312 (3%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF- 217
++Y L+ L R+ + A +++ NVV + T+I GY G ++ AK V
Sbjct: 323 FTYGVLMHGLCRMGKVDEARMLLNKVPNPNVV-----LFNTLINGYVSRGRLDEAKAVMH 377
Query: 218 -DVMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+++V P++ YNT+I G CKKG L A++ MNEM +GC PN +TY +I C
Sbjct: 378 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 437
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR++EA+ ++ +M G N + ++ LC K A+ ++ PD+ ++
Sbjct: 438 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 497
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G CK+ K +EA+ L ++M G+ ++N + + G + A+ L+ M
Sbjct: 498 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 557
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C + ++YN +I LC A G ++ L + M+ G N + + L+ G C GN++
Sbjct: 558 RGCPLDDITYNGLIKALCRA-GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 616
Query: 455 NVMQIAHEMVTK 466
+ ++ +M+ +
Sbjct: 617 HALEFLRDMIHR 628
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 174/369 (47%), Gaps = 41/369 (11%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAK-QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ LI Y RG + A H++ + G +++YN+L+ L + + A E ++
Sbjct: 355 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 414
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKG 240
+ + P+V TYT +I +CK G +E A+ V D M+ K N + YN +I+ CK
Sbjct: 415 MQIKGC-EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 473
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++++A +M ++GC+P+ T+N++I+GLC + +EA L M L G N T+
Sbjct: 474 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 533
Query: 301 SML-----------------------------------KGLCVVGKFDQAVGYLRNVMEA 325
+++ K LC G ++ + ++M
Sbjct: 534 TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 593
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+NP+ S ++ING C+ G A+ L++M RGL P + ++N++ L + G A
Sbjct: 594 GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEA 653
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ L ++ P+ ++YNT+I C +G D L+ R + SG + + L+
Sbjct: 654 LNLFDKLQVEGICPDAITYNTLISWHC-KEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 712
Query: 446 GYCEEGNVE 454
+ +EG+ E
Sbjct: 713 NFIKEGDQE 721
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 151/311 (48%), Gaps = 11/311 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF--- 217
Y L+ L K + Q+ +E +V + S + +++ Y + G+ A ++
Sbjct: 114 YYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRE-SLFILIMKHYGRAGLPGQATRLLLDM 172
Query: 218 -DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
V + +P +YN +++ + EM+++G P T+ ++ LC+
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD A L+ M +G N +++++ L VG+ ++ + L ++ PDV ++
Sbjct: 233 VDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFND 292
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
I+G CK+ + EA L+ M RG P F++ + L G++D A +LL ++P
Sbjct: 293 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-- 350
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLV-DRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
PN V +NT+I G +++GR+ + + ++ + M+ G D Y+ L+ G C++G + +
Sbjct: 351 --PNVVLFNTLINGY-VSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 407
Query: 456 VMQIAHEMVTK 466
++ +EM K
Sbjct: 408 ARELMNEMQIK 418
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 203/415 (48%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---NSNKLSDFFISKLI 130
FF W+S+ P +Y H+ Y+ + L + LI A ++L+ + K + L+
Sbjct: 106 FFYWSSSKMSTP-QYLHS---YSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLV 161
Query: 131 KAYGDRGNVKAAIF-----------WFHQAKQ-----IENG--ACLYSYNSLLGVLVRVN 172
+ Y + G +F + ++A I G L N+L+ L++ N
Sbjct: 162 RCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKAN 221
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--VKPNLLAYN 230
+ L + + +V+ +VP DV TYT +I+ +CK+G + K V M KPNL YN
Sbjct: 222 MMGLFWKVYGSMVEAKIVP-DVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYN 280
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
I G C+ G ++EA + MM +G P+ TY ++ G C R EAK++ M +
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G N T+ +++ G G ++A+ ++ + +V +Y +I G K G+ +A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+SL EM GL+P +++N + +++ ++ +A LL +M P+ +Y+ +I G
Sbjct: 401 MSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
LC + +Q +++D+MIR+G + MY L+K Y +E E +++ M+
Sbjct: 461 LCHS-SDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA 514
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 196/445 (44%), Gaps = 49/445 (11%)
Query: 64 EQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLIS----IAASLLKNSN 119
+Q A F + NPN++ YTA+ D + I I ++
Sbjct: 323 KQKRSKEAKLIFESMPSSGLNPNRF-----TYTALIDGFIKEGNIEEALRIKDEMITRGL 377
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
KL+ + +I G + A+ F++ ++YN L+ ++ + + A E
Sbjct: 378 KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACE 437
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
++ K + P TY+ +I G C ++ A +V D M VKPN+ Y T+I +
Sbjct: 438 LLAEM-KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAY 496
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
++ E A + + M+ G P+ YN +I GLC +V+EAKML+ M G K N
Sbjct: 497 VQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNA 556
Query: 297 STHKS-----------------------------------MLKGLCVVGKFDQAVGYLRN 321
T+ + ++KG C VG +A+ +
Sbjct: 557 HTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKC 616
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
++E + PD+++Y +I+ K GK+ EA+ + + G+ P VF +N++ + G+
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+++A L +M PN V YNT+I GLC G + +L D + D YS
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINGLCKL-GEVTKARELFDEIEEKDLVPDVVTYS 735
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTK 466
++ GYC+ GN+ ++ EM++K
Sbjct: 736 TIIDGYCKSGNLTEAFKLFDEMISK 760
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 159/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++ Y +L+ V+ + ++A E +I+ N V PD+ Y +I G C+ +E AK +
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELL-KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M +KPN Y IN + K GE++ A++ +M++ G PN + Y +I G C
Sbjct: 545 VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDV 604
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G EA M G ++ + +++ L GK +A+G ++ + PDV Y
Sbjct: 605 GNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLY 664
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+GFCK G ++A L EM G+ P + +N + L + GE+ +A L ++ +
Sbjct: 665 NSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEE 724
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
D +P+ V+Y+TII G C + G + + L D MI G + D +Y L+ G +EGN+E
Sbjct: 725 KDLVPDVVTYSTIIDGYCKS-GNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 783
Query: 455 NVMQIAHEMVTK 466
+ + HE K
Sbjct: 784 KALSLFHEAQQK 795
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 175/377 (46%), Gaps = 39/377 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +IKA+ G+V + ++ E L++YN+ +G L + ++ A E +++
Sbjct: 246 TNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEV-KKLMM 303
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
E + PD TYT ++ G+CK + AK +F+ M + PN Y +I+GF K+G +E
Sbjct: 304 EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIE 363
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +EM+ RG + N +TYNAMI G+ G + +A L +M + G + + T+ ++
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLI 423
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G +A L + + P +Y V+I+G C +A +L +M G+K
Sbjct: 424 DGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK 483
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-------- 415
P VF + + + V+ + AI LLK M LP+ YN +I GLC AK
Sbjct: 484 PNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKML 543
Query: 416 --------------------------GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
G +Q E M+ SG + +Y+ L+KG+C+
Sbjct: 544 LVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCD 603
Query: 450 EGNVENVMQIAHEMVTK 466
GN + M+ K
Sbjct: 604 VGNTVEALSTFKCMLEK 620
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 159/311 (51%), Gaps = 6/311 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y + + + + I++AE +F ++ +VP +V YT +I+G+C +G A F
Sbjct: 557 HTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV-IYTILIKGHCDVGNTVEALSTFK 615
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P++ AY+ +I+ K G+ +EA + + G P+ YN++I G C G
Sbjct: 616 CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+++A L +M NG N+ + +++ GLC +G+ +A + E ++ PDV +Y
Sbjct: 676 DIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYS 735
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+G+CK G EA L EM ++G+ P + + + + G L++A+ L + Q
Sbjct: 736 TIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE-AQQ 794
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ + ++N++I C G++ + +L D M+ + Y+ L+ Y + +E
Sbjct: 795 KSVGSLSAFNSLIDSFC-KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEE 853
Query: 456 VMQIAHEMVTK 466
Q+ +M T+
Sbjct: 854 AEQLFLDMETR 864
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 169/340 (49%), Gaps = 6/340 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I + G K A+ F + + ++ YNSL+ + I+ A + + +++
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML- 688
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
N + P++ Y T+I G CK+G + A+++FD + K P+++ Y+T+I+G+CK G L
Sbjct: 689 HNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLT 748
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA K +EM+++G P+ Y +I G G +++A L + + ++S S++
Sbjct: 749 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLI 807
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
C GK +A ++++ + P++ +Y ++I+ + K +EA L +M R +
Sbjct: 808 DSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNII 867
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P ++ ++ + G + I L K M + ++Y + C +G+ +
Sbjct: 868 PNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYC-KEGKSLEALK 926
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L+++ + G L+ ++ L+ C+E + V+++ EM
Sbjct: 927 LLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 966
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 165/370 (44%), Gaps = 21/370 (5%)
Query: 117 NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKL 176
N KL+ + +++ +V+ F++ + ++ L+SY+ L L I
Sbjct: 79 NVRKLNPEIVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQYLHSYSILAIRLCNSGLIHQ 138
Query: 177 AEEFFHQIVKENVVPPDV----------------STYTTMIRGYCKMGMIENAKKVFDVM 220
A+ ++++ P ++ + + I + +G + A VF
Sbjct: 139 ADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIAS 198
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P L+ N ++ K + K M+ P+ TY +I C G V
Sbjct: 199 ISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDV 258
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+ KM++++M K N+ T+ + + GLC G D+A+ + +ME + PD +Y ++
Sbjct: 259 IKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLL 317
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++GFCK +S EA + + M + GL P F++ A+ ++ G ++ A+ + +M
Sbjct: 318 VDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGL 377
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
N V+YN +I G+ A G M L + M+ +G D Y+ L+ GY + ++
Sbjct: 378 KLNVVTYNAMIGGIAKA-GEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKAC 436
Query: 458 QIAHEMVTKK 467
++ EM +K
Sbjct: 437 ELLAEMKARK 446
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 153/327 (46%), Gaps = 42/327 (12%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFF 181
F + LI + G+++ A + + + NG + YN+L+ L ++ + A E F
Sbjct: 662 FLYNSLISGFCKEGDIEKASQLYDE--MLHNGINPNIVVYNTLINGLCKLGEVTKARELF 719
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP----------------- 224
+I ++++VP DV TY+T+I GYCK G + A K+FD M K
Sbjct: 720 DEIEEKDLVP-DVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGK 778
Query: 225 --------------------NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
+L A+N++I+ FCK G++ EA++ ++M+++ PN +TY
Sbjct: 779 EGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTY 838
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+I ++EA+ L M N T+ S+L +G + + +++
Sbjct: 839 TILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEA 898
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ D +Y V+ + +CK GKS EA+ LL + G+K F+A+ L + ++
Sbjct: 899 RGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQIST 958
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGL 411
+ LL +M + + + + NT++ G
Sbjct: 959 VLELLSEMGKEELSLSSKTCNTLLLGF 985
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 127/284 (44%), Gaps = 13/284 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQ--AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
S +I Y GN+ A F + +K I Y Y L+ + +++ A FH+
Sbjct: 735 STIIDGYCKSGNLTEAFKLFDEMISKGISPDG--YIYCILIDGCGKEGNLEKALSLFHEA 792
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+++V +S + ++I +CK G + A+++FD M K PN++ Y +I+ + K
Sbjct: 793 QQKSV--GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEM 850
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM--LMAKMRLNGFKDNVSTH 299
+EEA++ +M R PN LTY +++ L N + KM L M G + +
Sbjct: 851 MEEAEQLFLDMETRNIIPNTLTYTSLL--LSYNQIGNRFKMISLFKDMEARGIACDAIAY 908
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
M C GK +A+ L + + + ++ +I CK + + LL EM
Sbjct: 909 GVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGK 968
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
L + + N + ++G D A +L M ++ +P +S
Sbjct: 969 EELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLS 1012
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 202/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + H Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 152/300 (50%), Gaps = 39/300 (13%)
Query: 143 IFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP--------- 191
+ W + +E G A LY +N L+ V+ I+LA+ F I K ++ P
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLM 178
Query: 192 -------------------------PDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVK 223
PDV TY+ +I G CK +++A ++FD M +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV 238
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN + + T+I+G CK G ++ A + M+++ P+ +TYN +IYGLC G + +A+ L
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +M + G K + T+ +++ G C G + A Y + +++ N+ D +Y +I+G C+
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQ 358
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+S +A +L+EM + GLKP + ++ + + G++ LLK+M + +P+ V+
Sbjct: 359 EGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 174/341 (51%), Gaps = 10/341 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+K + + A+ F + ++ + ++N+LL L + I A + FHQ+ K N
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPN 181
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
VV T+TT++ G C+ G + A + D M ++PN + Y T+++G CK G+ A
Sbjct: 182 VV-----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSA 236
Query: 246 KKCMNEMMN-RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ +M PN + YN +I GL +GR +A L +M+ ++ T+ M+
Sbjct: 237 LNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMIN 296
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C+ G++ A L+ ++E +NPDV ++ +IN F K GK EA L EM R + P
Sbjct: 297 GFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIP 356
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ +++++ + LD A + P C P+ +++NT+I G C AK R+ D L
Sbjct: 357 STVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAK-RVDDGIKL 415
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ M +G + Y+ L+ G+C+ G++ + EM++
Sbjct: 416 LHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMIS 456
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 175/335 (52%), Gaps = 18/335 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ V+ AEE + +++ +++P V TY++MI G+CK ++ A+ +F +
Sbjct: 325 TFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTV-TYSSMIDGFCKQNRLDAAEHMFYL 383
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
K P+++ +NT+I G+C+ +++ K ++EM G N +TY +I+G C G
Sbjct: 384 TPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 443
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN-------- 328
++ A+ L+ +M +G NV T ++L GLC GK A+ + + ++ M+
Sbjct: 444 LNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFN 503
Query: 329 ---PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
PDV++Y ++I G GK EA L +EM RG+ P +++++ L + LD A
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ M P+ V++NT+I G C A G + D +L M + G D Y L+
Sbjct: 564 TQMFDSMGSKSFSPDVVTFNTLITGYCKA-GMVDDGLELFCEMGQRGIVADAITYITLIY 622
Query: 446 GYCEEGNVENVMQIAHEMVTKK--GRLLKLKNFLT 478
G+ + N++ + I EM++ + ++N LT
Sbjct: 623 GFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLT 657
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 167/320 (52%), Gaps = 16/320 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ L + A F ++ +E + PD+ TY MI G+C G +A+++ M
Sbjct: 256 YNTIIDGLWKDGRHSDAHNLFIEM-QEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ ++ +IN F K+G+ EA++ +EM+ R P+ +TY++MI G C R+
Sbjct: 315 LERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRL 374
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A+ + G ++ T +++ G C + D + L + EA + + +Y +
Sbjct: 375 DAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 434
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM--PQM 395
I+GFC++G + A LL+EM + G+ P V + N + L +NG+L A+ + K M +M
Sbjct: 435 IHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494
Query: 396 D---------CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
D P+ +YN +ICGL + +G+ + E+L + M G D YS ++ G
Sbjct: 495 DIDASRPFNGVEPDVQTYNILICGL-INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 447 YCEEGNVENVMQIAHEMVTK 466
C++ ++ Q+ M +K
Sbjct: 554 LCKQSRLDEATQMFDSMGSK 573
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 151/324 (46%), Gaps = 15/324 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I + + + AA F+ + ++N+L+ R + + H++ +
Sbjct: 362 SSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 421
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+V + TYTT+I G+C++G + A+ + M V PN++ NT+++G C G+L+
Sbjct: 422 AGLVANTI-TYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLK 480
Query: 244 EAKKCMNEMMNR-----------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+A + M G P+ TYN +I GL G+ EA+ L +M G
Sbjct: 481 DALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ T+ SM+ GLC + D+A ++ + +PDV ++ +I G+CK G D+ +
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLE 600
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
L EM RG+ ++ + + +D A+ + ++M P+ ++ ++ GL
Sbjct: 601 LFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLW 660
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLD 436
+ + V L D + G+ L+
Sbjct: 661 SKEELERAVAMLEDLQMSVGYQLE 684
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 150/301 (49%), Gaps = 10/301 (3%)
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG---MIENAKKVFDVMTVKPNL 226
+ + A + F +V+ +P V + ++ +MG ++ + K +++ + N
Sbjct: 58 EIKGLDDAIDLFGYMVRSRPLPS-VIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNA 116
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
++ ++ FC +L A ++ G P +T+N +++GLC+ R+ EA L +
Sbjct: 117 YSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQ 176
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M K NV T +++ GLC G+ +AV L ++E + P+ +Y +++G CK+G
Sbjct: 177 M----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGD 232
Query: 347 SDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ A++LL++M + P V +N + L ++G A L +M + + P+ V+YN
Sbjct: 233 TVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYN 292
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+I G C++ GR D E L+ M+ N D +S L+ + +EG ++ EM+
Sbjct: 293 CMINGFCIS-GRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLP 351
Query: 466 K 466
+
Sbjct: 352 R 352
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 110/266 (41%), Gaps = 33/266 (12%)
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+GF + L++A M+ P+ + + ++ + GR D L KM +
Sbjct: 54 SGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMP 113
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI--------------- 338
N + ++K C K A+ + + +P V ++ ++
Sbjct: 114 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDL 173
Query: 339 ----------------NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
NG C+ G+ EA++LL M GL+P ++ + + + G+
Sbjct: 174 FHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233
Query: 383 DRAILLLKQMPQMD-CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
A+ LL++M ++ +PN V YNTII GL GR D +L M D Y+
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGL-WKDGRHSDAHNLFIEMQEKEIFPDIVTYN 292
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKK 467
C++ G+C G + Q+ EM+ +K
Sbjct: 293 CMINGFCISGRWSDAEQLLQEMLERK 318
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 8/184 (4%)
Query: 284 MAKMRLNGFKDNVSTHKSMLK---GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+AK +G D LK G + D A+ ++ + P V + ++
Sbjct: 31 LAKKSRDGESDEAGFGGESLKLQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGV 90
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
++G+ D ISL K+M + +SF + + +L A+ ++ ++ P
Sbjct: 91 VVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPT 150
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V++NT++ GLC+ + R+ + DL +M + + ++ L+ G C EG V + +
Sbjct: 151 VVTFNTLLHGLCV-EDRISEALDLFHQMCKP----NVVTFTTLMNGLCREGRVVEAVALL 205
Query: 461 HEMV 464
M+
Sbjct: 206 DRML 209
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 167/313 (53%), Gaps = 5/313 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+ +++ R + A +F ++ K + D TYT +I G C+ G ++ A++V M
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAA-DGVTYTALINGLCRAGELKEAERVLQEM 416
Query: 221 TVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K + + Y +I+G+CK G++ EA N+M+ + PN +TY A+ GLC G V
Sbjct: 417 EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDV 476
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A L+ +M G + N+ T+ S++ GLC G +QA+ + ++ EA + PDV +Y +
Sbjct: 477 CAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTI 536
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I C+ + D A SLL+EM +G+KPT+ ++N + +G ++ LL+ M + +
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +YN+++ C+ K M+ ++ M+ + Y+ L+KG+C+ N++ +
Sbjct: 597 HPNTTTYNSLMKQYCIEKN-MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL 655
Query: 458 QIAHEMVTKKGRL 470
EM+ K RL
Sbjct: 656 YFHSEMIEKGFRL 668
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 151/298 (50%), Gaps = 7/298 (2%)
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPN 225
VL R+ + A + F ++ ++N +Y +++ C G I++A ++FD M P+
Sbjct: 231 AVLCRL-PLDEAVQLFQELPEKNTC-----SYNILLKALCTAGRIKDAHQLFDEMASPPD 284
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++ Y M++G+C ELE A K ++EM RG N + Y ++I LC G+V +A ++
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVE 344
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
M ++G + + +++ G C G A + + + + D +Y +ING C+ G
Sbjct: 345 DMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAG 404
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ EA +L+EM +GL ++ + + G++ A L+ +M Q PN V+Y
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYT 464
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ GLC +G + +L+ M G L+ Y+ L+ G C+ GN+E M+ +M
Sbjct: 465 ALSDGLC-KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 130/267 (48%), Gaps = 4/267 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A ++ Q + +Y +L L + + A E H++ +
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ ++ TY ++I G CK G +E A + D +KP++ Y T+I C+ EL+ A
Sbjct: 491 L-ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ EM+++G +P +TYN ++ G C++GRV+ K L+ M N +T+ S++K
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C+ + ++ + P+ +Y ++I G CK EA+ EM +G + T
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 366 VFSFNAVFRILVENGELDRAILLLKQM 392
S+NA+ R+L + + A L ++M
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKM 696
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 192/402 (47%), Gaps = 63/402 (15%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
S +I + G+V A F K +++G + + NS++ L +V ++ AE Q+
Sbjct: 125 STVIHGFFKEGDVGKAYTLF--CKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM 182
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
+ E+++P + +TY ++I GY G A ++ M+ +PN++ YN +I+ CK G
Sbjct: 183 IDEHIMP-NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGF 241
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAM---------------------------------- 267
EA++ N M+ G +P+ TY ++
Sbjct: 242 HAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSI 301
Query: 268 -IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
IY C GR+DEA + KM+ GF ++ T+ +++ GLC +G+ D A+ +++
Sbjct: 302 EIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDG 361
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++P++ ++ +I+GF GK ++A L EM RG+ P V F A+ L + G++ A
Sbjct: 362 LSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQ 421
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L MP+ PN VSYNT+I G +A G + +V L+D M+ G ++ LL G
Sbjct: 422 KLFDLMPRAGAKPNVVSYNTMIHGYFIA-GEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG 480
Query: 447 Y-------------------CEEGNVENVMQIAHEMVTKKGR 469
CE+G +E+++ + EM+ K +
Sbjct: 481 MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADK 522
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 164/313 (52%), Gaps = 5/313 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKE-NVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
++SY++LL L + A E H + ++ + PPDV +Y+T+I G+ K G + A +
Sbjct: 84 VFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTL 143
Query: 217 FDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
F M + PN++ N++I+G CK +++A+ + +M++ PN TYN++I+G
Sbjct: 144 FCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLS 203
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+G+ EA ++ +M +G + NV T+ ++ LC G +A +++++ PD +
Sbjct: 204 SGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATT 263
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +++G+ G E ++ M G++ +F+ + G LD A L +M
Sbjct: 264 YGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQ 323
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
Q+ +P+ V+Y T+I GLC GR+ D +MI G + + ++ L+ G+ G
Sbjct: 324 QLGFMPDIVTYTTVIDGLCKI-GRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKW 382
Query: 454 ENVMQIAHEMVTK 466
E ++ +EM+ +
Sbjct: 383 EKAEELFYEMMDR 395
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 142/289 (49%), Gaps = 13/289 (4%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
V PD++T+ +I C G + + ++ + +A+ ++ C K +A
Sbjct: 9 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDA- 67
Query: 247 KCMNEMMNR----GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG--FKDNVSTHK 300
MN ++ R GC P+ +Y+ ++ GLC + +EA L+ M +G +V ++
Sbjct: 68 --MNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYS 125
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G G +A +++ + P+V + VI+G CK+ D+A ++L++M
Sbjct: 126 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE 185
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+ P ++N++ + +G+ A+ +LK+M + PN V+YN +I LC + G +
Sbjct: 186 HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKS-GFHAE 244
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
++ + MI+SG D T Y LL GY EGN+ + + MV R
Sbjct: 245 AREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMR 293
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 140/295 (47%), Gaps = 23/295 (7%)
Query: 79 SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGN 138
S P P+ Y Y +++ + ++ +++N + + S I AY G
Sbjct: 255 SGPKPDATTYGSLLHGYATEGNLV---EMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGR 311
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
+ A F + +Q+ + +Y +++ L ++ + A F Q++ + + P++ T+T
Sbjct: 312 LDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGL-SPNIITFT 370
Query: 199 TMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
T+I G+ G E A+++F M + P++ + MI+ K+G++ EA+K + M
Sbjct: 371 TLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRA 430
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G +PN ++YN MI+G I G V E L+ M L G K T ++L G+ +G
Sbjct: 431 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMG----- 485
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ PDV + + +I+ C+ G+ ++ ++L +EM + K + N
Sbjct: 486 -----------LKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 529
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
A+ + P + +F + + G L+ L Q+ + + V++ ++ LC AK R
Sbjct: 6 AKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLC-AKKRT 64
Query: 419 QDVEDLV-DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D ++V RM G D YS LLKG C E E ++ H M
Sbjct: 65 SDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMA 111
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 185/387 (47%), Gaps = 37/387 (9%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI ++ G ++ A WF + + + +Y SL+ ++ + A + F ++ E
Sbjct: 494 LIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEG 553
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-------------------VKPNLLAY 229
P+V TYT +I G+CK G I+ A +++ M PN++ Y
Sbjct: 554 S-KPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITY 612
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+++G CK +EEA + ++ M GC PN++ Y+A+I G C G+++ A+ + KM
Sbjct: 613 GALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSE 672
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G+ N+ T+ S++ L + D + L ++E + P+V Y +I+G CK+GK++E
Sbjct: 673 RGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEE 732
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A L+ +M G P V ++ A+ + G++++ + L + M C PNF++Y +I
Sbjct: 733 AYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLI- 791
Query: 410 GLCMAKGRMQDVEDLVDRM--------------IRSGHNLDFTMYSCLLKGYCEEGN--V 453
C + G + + L+D M I G N +F LL E + V
Sbjct: 792 NHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPV 851
Query: 454 ENVMQIAHEMVTKKGRLLKLKNFLTRV 480
E++ +I + K GRL N L +
Sbjct: 852 ESLYRILIDNFIKAGRLEGALNLLEEI 878
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 156/331 (47%), Gaps = 27/331 (8%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK------MGMIENAK 214
+NSL+ + A + F +++K P + Y I C ++E A+
Sbjct: 345 FNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYL-LYNIFIGSICSNEELPGSDLLELAE 403
Query: 215 KVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
K + M V N + + C G+ ++A + + EMM++G P++ TY+ +I L
Sbjct: 404 KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFL 463
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +V++A +L +M+ NG +V T+ ++ C G QA + ++ N P+V
Sbjct: 464 CDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNV 523
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I+ + K K +A L + M G KP V ++ A+ + G++D+A + +
Sbjct: 524 VTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYAR 583
Query: 392 M---------------PQMDC-LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
M DC PN ++Y ++ GLC A R+++ +L+D M +G
Sbjct: 584 MQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKAN-RVEEAHELLDTMSVNGCEP 642
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +Y L+ G+C+ G +EN ++ +M +
Sbjct: 643 NQIVYDALIDGFCKTGKLENAQEVFVKMSER 673
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 176/453 (38%), Gaps = 61/453 (13%)
Query: 46 LDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVL--- 102
L QF L +V +V+ +P + FF WAS Y HT Y A+ ++L
Sbjct: 91 LRQFRGRLSEPLVVEVMNLVKHPEFCVEFFLWASRQI----GYSHTPVVYNALIELLCCN 146
Query: 103 ------LSHS-LISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG 155
+SH L+ I + KL +F I K + G A+ + K
Sbjct: 147 AVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCR----NGMWNVALEELGRLKDFGYK 202
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
A +YN+L+ V +R + + A H+ + + D T CK G +A
Sbjct: 203 ASPTTYNALIQVFLRADKLDTAF-LVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALS 261
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ + P+ + YN M++G C+ +EA ++ M + C PN +TY ++ G G
Sbjct: 262 LLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKG 321
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++ K +++ M G N S++ C + A + +++ P Y
Sbjct: 322 QLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYN 381
Query: 336 VVINGFCK-----------------------------------------IGKSDEAISLL 354
+ I C GK D+A ++
Sbjct: 382 IFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEII 441
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
EM ++G P +++ V L + ++++A LL ++M + +P+ +Y +I C A
Sbjct: 442 CEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKA 501
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
G +Q + D M+R + Y+ L+ Y
Sbjct: 502 -GLIQQARNWFDEMLRDNCTPNVVTYTSLIHAY 533
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 131/337 (38%), Gaps = 80/337 (23%)
Query: 95 YTAITDVLLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y A+ D L + + A LL N + + LI + G ++ A F K
Sbjct: 612 YGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVF--VK 669
Query: 151 QIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP----------------- 191
E G C LY+Y+SL+ L + + L + ++++ + P
Sbjct: 670 MSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGK 729
Query: 192 -----------------PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNT 231
P+V TYT MI G+ K+G IE +++ M K PN + Y
Sbjct: 730 TEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRV 789
Query: 232 MINGFCKKGELEEAKKCMNEM------------------MNRG---------------CR 258
+IN C G L+EA + ++EM NR
Sbjct: 790 LINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESV 849
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG--FKDNVSTHKSMLKGLCVVGKFDQAV 316
P E Y +I GR++ A L+ ++ + N + S+++ L K D+A
Sbjct: 850 PVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAF 909
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+++ N+ P++ ++ +I G ++GK EA+ L
Sbjct: 910 ELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 168/313 (53%), Gaps = 7/313 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN+LL V K +E + KE VV V+TY+ +I+ Y G IE A+K+F
Sbjct: 252 VFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFS-VATYSILIQWYSSSGDIEEAEKIF 310
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M ++ ++ Y++MI+ + G ++ A +EM R PN TY A+I G+C
Sbjct: 311 EEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKA 370
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN-MNPDVKS 333
G+++ A++L+ +M+ G N+ + + G C GK D+A+ L+ +ME +N DV +
Sbjct: 371 GQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEAL-RLQAIMEKKGINADVFT 429
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y ++ NG CK+ + DEA +L M +G+KP V +F I + G L A L + M
Sbjct: 430 YNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDME 489
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ +PN ++YNT+I C K +++ + MI G D YS L+ G C G V
Sbjct: 490 KKGEVPNIITYNTLIDAYC-KKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRV 548
Query: 454 ENVMQIAHEMVTK 466
+ +++ +EM K
Sbjct: 549 DEALKLFNEMRLK 561
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 189/389 (48%), Gaps = 14/389 (3%)
Query: 86 NKYHHTTPCYTAITDVLLSHSLISIAASLL-----KNSNKLSDFFISKLIKAYGDRGNVK 140
NK+ T + DVL + A L+ K K + F + L+ AY R + K
Sbjct: 210 NKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRK 269
Query: 141 AA--IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
I + +Q+ YS L+ I+ AE+ F ++ ++N+ DV Y+
Sbjct: 270 GVDEILKLMEKEQVVFSVATYSI--LIQWYSSSGDIEEAEKIFEEMREKNI-EMDVYVYS 326
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
+MI ++G ++ A +FD M+ + PN Y +I G CK G++E A+ + EM ++
Sbjct: 327 SMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSK 386
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G N + +N + G C G++DEA L A M G +V T+ + GLC + ++D+A
Sbjct: 387 GVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEA 446
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
L +++E + P+V ++ + I +CK G EA L ++M +G P + ++N +
Sbjct: 447 KCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDA 506
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
+ ++ +A + +M LP+ +Y+++I G C+ GR+ + L + M G
Sbjct: 507 YCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIV-GRVDEALKLFNEMRLKGITR 565
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ Y+ ++ G +EG + ++ EM+
Sbjct: 566 NVATYTSMISGLSKEGRADEAFKLYDEMM 594
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 166/324 (51%), Gaps = 5/324 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI+ Y G+++ A F + ++ +Y Y+S++ R+ ++K A F ++ +
Sbjct: 291 SILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQ 350
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELE 243
++VP + TY +I G CK G +E A+ + M K NL+ +NT ++G+C++G+++
Sbjct: 351 RDIVP-NAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMD 409
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + M +G + TYN + GLC R DEAK ++ M G K NV T +
Sbjct: 410 EALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFI 469
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+ C G +A R++ + P++ +Y +I+ +CK K +A + EM +GL
Sbjct: 470 EIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLL 529
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +++++++ G +D A+ L +M N +Y ++I GL +GR +
Sbjct: 530 PDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLS-KEGRADEAFK 588
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGY 447
L D M++ G D +++ L+ +
Sbjct: 589 LYDEMMKIGLIPDDRVFTSLVGSF 612
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 135/239 (56%), Gaps = 16/239 (6%)
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
+ Y RG + A+ QA + G A +++YN L L +++ A+ + +V E
Sbjct: 399 MDGYCRRGKMDEALRL--QAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMV-E 455
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEE 244
V P+V T+T I YCK G + A+++F M K PN++ YNT+I+ +CKK ++++
Sbjct: 456 KGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQ 515
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A K +EM+N+G P+ TY+++I+G CI GRVDEA L +MRL G NV+T+ SM+
Sbjct: 516 AHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMIS 575
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK--------IGKSDEAISLLK 355
GL G+ D+A +M+ + PD + + ++ F K I K+ ++ S+L+
Sbjct: 576 GLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHKPLTHAGLDIQKASDSDSVLR 634
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 149/298 (50%), Gaps = 5/298 (1%)
Query: 115 LKNSNKLSDFFISKLIKAYGDR-GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
++ N D ++ + ++ R GN+K A F + Q + ++Y +L+G + +
Sbjct: 313 MREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQ 372
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYN 230
++ AE ++ + V ++ + T + GYC+ G ++ A ++ +M K ++ YN
Sbjct: 373 MEAAEILLLEMQSKGV-DLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYN 431
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+ NG CK +EAK +N M+ +G +PN +T+ I C G + EA+ L M
Sbjct: 432 ILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKK 491
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G N+ T+ +++ C K QA ++ + PD+ +Y +I+G C +G+ DEA
Sbjct: 492 GEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEA 551
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+ L EMR +G+ V ++ ++ L + G D A L +M ++ +P+ + +++
Sbjct: 552 LKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 158/276 (57%), Gaps = 3/276 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
P+ TY ++ G C+MG ++ A+ + + + PN++ +NT+ING+ +G L+EAK M+E
Sbjct: 338 PNSFTYGVLMHGLCRMGKVDEARMLLNKVP-NPNVVLFNTLINGYVSRGRLDEAKAVMHE 396
Query: 252 -MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M++ GC P+ TYN +I GLC G + A+ LM +M++ G + NV T+ ++ C G
Sbjct: 397 SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 456
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ ++A L + + + Y +I+ CK K +A+++ +M ++G KP +F+FN
Sbjct: 457 RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 516
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
++ L + + + A+ L + M + N ++YNT+I + +G MQ+ LV+ M+
Sbjct: 517 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF-LRRGAMQEALKLVNDMLF 575
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G LD Y+ L+K C GN+E + + +M++K
Sbjct: 576 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 611
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 161/306 (52%), Gaps = 4/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N+L+ V + A+ H+ + PD+ TY T+I G CK G + +A+++ + M
Sbjct: 374 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 433
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+K PN++ Y +I+ FCK+G LEEA+ ++EM +G N + YN +I LC + +V
Sbjct: 434 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 493
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A + M G K ++ T S++ GLC V KF++A+G ++++ + + +Y +
Sbjct: 494 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 553
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ F + G EA+ L+ +M RG ++N + + L G +++ + L + M
Sbjct: 554 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 613
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +S N +I GLC G +Q + + MI G D Y+ L+ G C+ G + +
Sbjct: 614 NPNNISCNILINGLCRT-GNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672
Query: 458 QIAHEM 463
+ ++
Sbjct: 673 NLFDKL 678
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 158/312 (50%), Gaps = 10/312 (3%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF- 217
++Y L+ L R+ + A +++ NVV + T+I GY G ++ AK V
Sbjct: 341 FTYGVLMHGLCRMGKVDEARMLLNKVPNPNVV-----LFNTLINGYVSRGRLDEAKAVMH 395
Query: 218 -DVMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+++V P++ YNT+I G CKKG L A++ MNEM +GC PN +TY +I C
Sbjct: 396 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 455
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR++EA+ ++ +M G N + ++ LC K A+ ++ PD+ ++
Sbjct: 456 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 515
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G CK+ K +EA+ L ++M G+ ++N + + G + A+ L+ M
Sbjct: 516 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 575
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C + ++YN +I LC A G ++ L + M+ G N + + L+ G C GN++
Sbjct: 576 RGCPLDDITYNGLIKALCRA-GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 634
Query: 455 NVMQIAHEMVTK 466
+ ++ +M+ +
Sbjct: 635 HALEFLRDMIHR 646
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 174/369 (47%), Gaps = 41/369 (11%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAK-QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ LI Y RG + A H++ + G +++YN+L+ L + + A E ++
Sbjct: 373 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 432
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKG 240
+ + P+V TYT +I +CK G +E A+ V D M+ K N + YN +I+ CK
Sbjct: 433 MQIKGC-EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 491
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++++A +M ++GC+P+ T+N++I+GLC + +EA L M L G N T+
Sbjct: 492 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 551
Query: 301 SML-----------------------------------KGLCVVGKFDQAVGYLRNVMEA 325
+++ K LC G ++ + ++M
Sbjct: 552 TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 611
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+NP+ S ++ING C+ G A+ L++M RGL P + ++N++ L + G A
Sbjct: 612 GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEA 671
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ L ++ P+ ++YNT+I C +G D L+ R + SG + + L+
Sbjct: 672 LNLFDKLQVEGICPDAITYNTLISWHC-KEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 730
Query: 446 GYCEEGNVE 454
+ +EG+ E
Sbjct: 731 NFIKEGDQE 739
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 151/311 (48%), Gaps = 11/311 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF--- 217
Y L+ L K + Q+ +E +V + S + +++ Y + G+ A ++
Sbjct: 132 YYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRE-SLFILIMKHYGRAGLPGQATRLLLDM 190
Query: 218 -DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
V + +P +YN +++ + EM+++G P T+ ++ LC+
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 250
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD A L+ M +G N +++++ L VG+ ++ + L ++ PDV ++
Sbjct: 251 VDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFND 310
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
I+G CK+ + EA L+ M RG P F++ + L G++D A +LL ++P
Sbjct: 311 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-- 368
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLV-DRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
PN V +NT+I G +++GR+ + + ++ + M+ G D Y+ L+ G C++G + +
Sbjct: 369 --PNVVLFNTLINGY-VSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 425
Query: 456 VMQIAHEMVTK 466
++ +EM K
Sbjct: 426 ARELMNEMQIK 436
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ N HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHGAKNSEHALQFFRWVERSNL----FQHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG+ G V+ ++ F + ++ + SY++L V+ R
Sbjct: 70 DMPKKGLEWDEDMWVL-MIDSYGNGGIVQESVKLFQKMDELGVERTIKSYDALFKVISRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNREITPDVIT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +++ + P D + +I+G CK G
Sbjct: 248 GYGIKANAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQM--------PQM 395
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ PQ
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQS 363
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHMESSAYNPLIGYLC-NNGQTAKAEALVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 116/261 (44%), Gaps = 12/261 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LIK Y V A+ + K A +Y++LL L + A ++V
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGYGIKANAITYSTLLPGLCNAEKMSEARSILKEMVD 283
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ + P D S + +I G CK G ++ A V M +V Y +I +CK G+ +
Sbjct: 284 KYIAPTDNSIFMRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYD 343
Query: 244 EAKKCMNEMMNRG--CRPNEL------TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
+A K +++++ + RP YN +I LC NG+ +A+ L+ ++ G +D
Sbjct: 344 QAVKLLDKLIEKDIILRPQSTLHMESSAYNPLIGYLCNNGQTAKAEALVRQLMKLGVQDP 403
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
+ + ++++G G D A L+ ++ ++ + +Y+ ++ + K + +A + L
Sbjct: 404 TALN-TLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKRSEPADAKAALD 462
Query: 356 EMRARGLKPTVFSFNAVFRIL 376
M P F +V L
Sbjct: 463 SMIENDHLPDSSLFRSVMESL 483
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 172/327 (52%), Gaps = 12/327 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N+++ L R+ ++ A + I K + P V+TY ++I GYCK G N V
Sbjct: 191 IYTFNTVISGLCRIGQLRKAGDVAKDI-KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVD 249
Query: 218 DVMT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++ + P + + +ING+CK A + EM +G + +TYN++I GL
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G+V+E LM +M G N T +LKG C G A ++ + E N+ PDV
Sbjct: 310 CSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV 369
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
Y ++I+ + ++GK ++A+++ + M +G+ P V ++N + +G+ A LL +
Sbjct: 370 VIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDE 429
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + + V+YN +I LC KG ++ L+D M G + Y+ +++G+C++G
Sbjct: 430 MKEKGIEADVVTYNVLIGALC-CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Query: 452 NVENVMQIAHEMVTKKGRLLKLKNFLT 478
N+++ A+E+ T+ + K N +T
Sbjct: 489 NIKS----AYEIRTRMEKCRKRANVVT 511
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 147/296 (49%), Gaps = 5/296 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y N AA+ F + KQ A + +YNSL+ L ++ + ++
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P ++ T+ +++G+CK GM+ +A D MT V+P+++ YN +I+ + + G++E+A
Sbjct: 330 LSPNEI-TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDA 388
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
M +G PN TYN +I G +G A L+ +M+ G + +V T+ ++
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ +AV L + E + P+ +Y +I GFC G A + M +
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
V ++N + + G++D A LL +M +PN ++Y TI G+ M KG D+
Sbjct: 509 VVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM-MEKGYTPDI 563
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 129/249 (51%), Gaps = 5/249 (2%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P+ + N ++ G ++ A+K + R P+ T+N +I GLC G++ +A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCV---VGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
+ ++ G +V+T+ S++ G C G L+ ++EA ++P ++ V+IN
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G+CK + A+ + +EM+ +G+ +V ++N++ L G+++ + L+++M + P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
N +++ ++ G C KG M D D +D M D +Y+ L+ Y G +E+ M +
Sbjct: 333 NEITFGCVLKGFC-KKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391
Query: 460 AHEMVTKKG 468
E + KKG
Sbjct: 392 -KEAMAKKG 399
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 165/332 (49%), Gaps = 24/332 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ + +K A Q+ + PP+ TY+ +I CK G A+++ +
Sbjct: 193 TYNSLVHGYLSSGQLKEAVRILKQMSRHGQ-PPNGVTYSMLIDCLCKFGGHTEAREILNS 251
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M PN+ Y +++G+ KG+L E ++ M+ G RP+ +N IY GR
Sbjct: 252 MIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGR 311
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEA + KMR G ++ ++ +M+ GLC +G+ D A+ +++ ++PD+ +
Sbjct: 312 LDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTN 371
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+GF GK ++A L EM RG++PTV F + L + G++ A L MP
Sbjct: 372 LIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIAS 431
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDV-------------------EDLVDRMIRSGHNLDF 437
PN VSYN II G +A G++ +V L+D M+ G D
Sbjct: 432 VKPNVVSYNAIIHGYFLA-GKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDV 490
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+ L+ CE+G +E+V+ + EM++K +
Sbjct: 491 ATCNTLIDSCCEDGRIEDVLTLFREMLSKAAK 522
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 167/316 (52%), Gaps = 5/316 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKE-NVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
++SY LL L + A + H + ++ + PP+V +YTT+I G+ K + A +
Sbjct: 84 VFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTL 143
Query: 217 FDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
F M + P+++ N++I+G CK +++A++ + +M ++ P+ TYN++++G
Sbjct: 144 FCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLS 203
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+G++ EA ++ +M +G N T+ ++ LC G +A L +++++ NP+V +
Sbjct: 204 SGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVAT 263
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +++G+ G E +L+ M G++P FN V+ G LD A+L +M
Sbjct: 264 YGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMR 323
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
Q +P+ +SY T+I GLC GR+ +MI G + D +++ L+ G+ G
Sbjct: 324 QQGLMPDIISYGTMIDGLCKI-GRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKW 382
Query: 454 ENVMQIAHEMVTKKGR 469
E ++ +EM+ + R
Sbjct: 383 EKAEELFYEMMDRGIR 398
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 126/250 (50%), Gaps = 20/250 (8%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N + V+ + A F+++ ++ ++P D+ +Y TMI G CK+G ++ A F M
Sbjct: 299 FNIQIYAYVKCGRLDEAMLTFNKMRQQGLMP-DIISYGTMIDGLCKIGRLDAAMSQFCQM 357
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ + +I+GF G+ E+A++ EMM+RG RP + + MI L G+V
Sbjct: 358 IDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKV 417
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EAK L M + K NV ++ +++ G + GK D+ + L +++ + P+ ++
Sbjct: 418 TEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFN-- 475
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+LL +M + GLKP V + N + E+G ++ + L ++M
Sbjct: 476 --------------TLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAA 521
Query: 398 LPNFVSYNTI 407
+ V+ N I
Sbjct: 522 KTDTVTENII 531
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 133/270 (49%), Gaps = 7/270 (2%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
V P TYT +I C +G + A + ++ N +++ ++ C + +A
Sbjct: 9 VAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAM 68
Query: 247 KCMNEMMNR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG--FKDNVSTHKSML 303
+ + GC P+ +Y ++ GLC + +EA L+ M +G NV ++ +++
Sbjct: 69 NIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVI 128
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G + +A +++ + PDV + +I+G CK+ D+A +L++M + +
Sbjct: 129 HGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIM 188
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P ++N++ + +G+L A+ +LKQM + PN V+Y+ +I LC G + +
Sbjct: 189 PDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTE-ARE 247
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+++ MI+S N + Y LL GY +G++
Sbjct: 248 ILNSMIQSRGNPNVATYGGLLHGYATKGDL 277
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 4/208 (1%)
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG- 317
P +TY +I C G ++ A + ++ G + N + +L+ LC + A+
Sbjct: 11 PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG--LKPTVFSFNAVFRI 375
+R + PDV SY V++ G C K +EA+ L+ M G P V S+ V
Sbjct: 71 VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
+ E+ +A L +M P+ V+ N+II GLC + M E+++ +M
Sbjct: 131 FFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQA-MDKAEEVLRQMFDKHIMP 189
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D T Y+ L+ GY G ++ ++I +M
Sbjct: 190 DCTTYNSLVHGYLSSGQLKEAVRILKQM 217
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
++ + PT ++ + G L+ A L Q+ + N +S+ I+ LC A+ R
Sbjct: 6 SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLC-AEKRT 64
Query: 419 QDVEDLVDRMI-RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D ++V R + G D Y+ LLKG C+E E + + H M
Sbjct: 65 SDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMM 110
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 184/364 (50%), Gaps = 9/364 (2%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+++ A +L+ + LIK + A F + +++ +Y +L+
Sbjct: 151 LAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKG 210
Query: 168 LVRVNSIKLAEEFFHQIVKENVV-----PPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV 222
L R +I +A + +++ ++ + P V +Y+ +I CK + A+ +F+ M V
Sbjct: 211 LCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKV 270
Query: 223 K---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+ P +++Y ++I+GFC G+ EEAK+ NEM+N+G +PN +T+N +I LC G+V E
Sbjct: 271 QGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIE 330
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
AK L+ M G N+ T+ S+++G C+VG + A ++ PDV Y V+IN
Sbjct: 331 AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLIN 390
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G+CK K +EA+ L M G +P V ++ A+ L + G++ A L M
Sbjct: 391 GYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPG 450
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ Y + GLC G + + +L +++ LD ++CL+ G C+ G +E ++
Sbjct: 451 DLYIYGIFLNGLC-KNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWEL 509
Query: 460 AHEM 463
++
Sbjct: 510 FEKL 513
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 201/423 (47%), Gaps = 56/423 (13%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKL----SDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT + L IS AA L KL + L+K GN+ A+ HQ
Sbjct: 169 YTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIAL-KLHQ-- 225
Query: 151 QIENGACLY---------SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
++ N + LY SY+ ++ L + A + F ++ K + P V +YT++I
Sbjct: 226 EMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEM-KVQGMTPTVISYTSLI 284
Query: 202 RGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
G+C G E AK++F+ M V+PN++ +N +I+ CK+G++ EAK + M+ RG
Sbjct: 285 HGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIV 344
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
PN LTYN++I G C+ G ++ A+ L M G + +V + ++ G C K ++A+
Sbjct: 345 PNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKL 404
Query: 319 LRNVMEANMNPDVKSYE-----------------------------------VVINGFCK 343
+++ PDVK+Y + +NG CK
Sbjct: 405 YNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCK 464
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G EA+ L ++++ +K + FN + L + G+L+ A L +++PQ + P+ V+
Sbjct: 465 NGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVT 524
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YN +I C G++ L +M ++G D Y+ L++G+ E +E V+++ H M
Sbjct: 525 YNIMIHEFCRG-GQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 583
Query: 464 VTK 466
V +
Sbjct: 584 VQR 586
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 158/280 (56%), Gaps = 5/280 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ VL + + A++ +++ +VP ++ TY ++I G+C +G + +A+++F
Sbjct: 314 TFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP-NLLTYNSLIEGFCLVGDLNSARELFVS 372
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ Y +ING+CK ++EEA K N M+ G RP+ TY A++ GL G+
Sbjct: 373 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 432
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V +AK L M++ G ++ + L GLC G +A+ + N+ D++ +
Sbjct: 433 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 492
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G CK GK + A L +++ L+P V ++N + G++ +A +L ++M +
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
C P+ ++Y T+I G +K +++ V +L+ M++ +LD
Sbjct: 553 CTPDKITYATLIRGFFESK-KLEKVVELLHMMVQRDVSLD 591
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 155/299 (51%), Gaps = 11/299 (3%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
A +FFH ++ N PP +S++T ++ G K+ +++ M + P+ N ++
Sbjct: 80 AFQFFHLMMYSNPTPP-LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
N C + E M ++ RG P+ +TY +I GLC+ R+ +A +L +M+ G
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVME------ANMNPDVKSYEVVINGFCKIGKS 347
N T+ +++KGLC G A+ + ++ N P V SY ++I+ CK +
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
DEA L +EM+ +G+ PTV S+ ++ G+ + A L +M PN V++N +
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
I LC +G++ + +DL++ MI+ G + Y+ L++G+C G++ + ++ M +K
Sbjct: 319 IDVLC-KEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK 376
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 107/206 (51%), Gaps = 4/206 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y V+ A+ ++ Q+ + +Y +LL L + + A++ F ++K
Sbjct: 388 LINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF-GVMKVY 446
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+P D+ Y + G CK G + A ++F+ + +K ++ +N +I+G CK G+LE A
Sbjct: 447 GIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETA 506
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ +P+ +TYN MI+ C G+V +A +L KM NG + T+ ++++G
Sbjct: 507 WELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRG 566
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDV 331
K ++ V L +++ +++ DV
Sbjct: 567 FFESKKLEKVVELLHMMVQRDVSLDV 592
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 202/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEENL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L E + N M G +P+ TY+ +I GLC ++D+A +L +M G N
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 203/410 (49%), Gaps = 15/410 (3%)
Query: 64 EQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASL---LKNSNK 120
+Q AL FF+ + P+PN+ Y + + + ++ A L +KN N
Sbjct: 361 KQDKLVSALEFFDKMNENGPSPNRV-----TYAVLIEWCCKNGNMAKAYDLYTQMKNKNI 415
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
FI + LI+ + + + A F +A + A +++YNSLL L + + A
Sbjct: 416 CPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATT 474
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGF 236
+ +++ + + P VS Y +MI G+C+ G ++ A VF M +KPN++ Y+ +++G+
Sbjct: 475 LWQKMLDKGLAPTKVS-YNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGY 533
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+ E A + M++ P++ TYN I GLC GR EA+ ++ K GF
Sbjct: 534 FKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVC 593
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ S++ G G A+ R + E+ ++P+V +Y +INGFCK +D A+ + E
Sbjct: 594 LTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNE 653
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
MR +GL+ + ++ A+ + +++ A L ++ PN V YN++I G
Sbjct: 654 MRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGY-RNLN 712
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M+ +L RM+ G + D Y+ L+ G +EG + + + EM K
Sbjct: 713 NMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAK 762
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 176/343 (51%), Gaps = 10/343 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ L+K Y + + +A+ +F K ENG +Y L+ + ++ A + + Q+
Sbjct: 353 TTLVKGYCKQDKLVSALEFFD--KMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQM 410
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD--VMTVKPNLLAYNTMINGFCKKGEL 242
+N+ P V ++IRG+ K+ E A K+FD V N+ YN++++ CK+G++
Sbjct: 411 KNKNICPT-VFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKM 469
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA +M+++G P +++YN+MI G C G +D A + + M G K NV T+ +
Sbjct: 470 SEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSIL 529
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G G + A +++ N+ P +Y + ING CK+G++ EA +LK+ +G
Sbjct: 530 MDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGF 589
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P ++N++ ++ G + A+ ++M + PN ++Y T+I G C K D+
Sbjct: 590 VPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFC--KNNNTDLA 647
Query: 423 -DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ + M G LD Y L+ G+C++ ++E + E++
Sbjct: 648 LKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELL 690
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 155/310 (50%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+ L+ + + A F ++V EN+VP D TY I G CK+G A+ +
Sbjct: 525 TYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDF-TYNIKINGLCKVGRTSEAQDMLKK 583
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
K P L YN++++GF K+G + A EM G PN +TY +I G C N
Sbjct: 584 FVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNN 643
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A + +MR G + +++ + +++ G C + A +++ ++P+ Y
Sbjct: 644 TDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNS 703
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+ + + A++L K M G+ + ++ + L++ G L A+ L +M
Sbjct: 704 LISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKG 763
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+P+ + Y +I GLC KG++++ + ++ M R + +Y+ L+ G+ + GN++
Sbjct: 764 IIPDIIIYTVLINGLC-GKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEA 822
Query: 457 MQIAHEMVTK 466
++ +EM+ K
Sbjct: 823 FRLHNEMLDK 832
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 158/329 (48%), Gaps = 5/329 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ Y G+ + A + F + ++YN + L +V A++ + V+
Sbjct: 527 SILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVE 586
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ VP + TY +++ G+ K G + +A + M V PN++ Y T+INGFCK +
Sbjct: 587 KGFVPVCL-TYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTD 645
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A K NEM N+G + Y A+I G C ++ A L +++ G N + S++
Sbjct: 646 LALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLI 705
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G + + A+ + ++ ++ D+++Y +I+G K G+ A+ L EM A+G+
Sbjct: 706 SGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGII 765
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + + + L G+L+ A +L +M + PN YN +I G A G +Q+
Sbjct: 766 PDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKA-GNLQEAFR 824
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
L + M+ G + T Y L+ G + GN
Sbjct: 825 LHNEMLDKGLTPNDTTYDILINGKIKGGN 853
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 206/464 (44%), Gaps = 63/464 (13%)
Query: 43 SQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVL 102
++P Q S+ +N++ ++ + +PY AL +F K T + D L
Sbjct: 73 TKPASQDSVLARTNVIDTLLSYKRDPYSALTYF-----------KQLECTRGFVRSLDSL 121
Query: 103 --LSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIF--WFHQAKQIENGACL 158
L H +++ ++ LK + L + FIS GD G + + + K+ + + +
Sbjct: 122 CVLLH-ILTRSSETLKQAQNLLNRFIS------GDSGPMPNILVDHFIGSTKRFDFDSDI 174
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP--------------------------- 191
YN LL ++ N + A F+++V+ ++VP
Sbjct: 175 RIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEK 234
Query: 192 -------PDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGE 241
D T M+R K E AKK F VK + AY+ +I FCK +
Sbjct: 235 MVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLD 294
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI-NGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+E A + +M ++G P+E T+ ++I G C+ G + EA L +M G + NV
Sbjct: 295 VELACGLLKDMRDKGWVPSEGTFTSVI-GACVKQGNMVEALRLKDEMVSCGVQMNVVVAT 353
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++KG C K A+ + + E +P+ +Y V+I CK G +A L +M+ +
Sbjct: 354 TLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNK 413
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+ PTVF N++ R ++ + A L + D + N +YN+++ LC +G+M +
Sbjct: 414 NICPTVFIVNSLIRGFLKVESREEASKLFDEAVACD-IANIFTYNSLLSWLC-KEGKMSE 471
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L +M+ G Y+ ++ G+C +GN++ + +M+
Sbjct: 472 ATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDML 515
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 104/208 (50%), Gaps = 5/208 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ + I+ A F +++ + P V Y ++I GY + +E A +
Sbjct: 665 AYGALIDGFCKKQDIETASWLFSELLDGGLSPNSV-IYNSLISGYRNLNNMEAALNLQKR 723
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + +L Y T+I+G K+G L A +EM +G P+ + Y +I GLC G+
Sbjct: 724 MLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQ 783
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ A+ ++A+M + NV + +++ G G +A +++ + P+ +Y++
Sbjct: 784 LENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDI 843
Query: 337 VINGFCKIGKSD-EAISLLKEMRARGLK 363
+ING K G S +++ LK +G+K
Sbjct: 844 LINGKIKGGNSALKSLLSLKFKDGKGMK 871
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 176/344 (51%), Gaps = 7/344 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F+I+ IKA+ + GNV Q + + ++ Y L+ R I A+ F +
Sbjct: 110 FWIT--IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSR 167
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ + + + YT MI G+ K G ++ +++ M V PNL YN++I +C+ G
Sbjct: 168 M-DDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDG 226
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L A K +E+ RG N +TYN +I GLC G+V +A+ L+ +M+ T
Sbjct: 227 KLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFN 286
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ GLC G+ D+A+ YL + + P + +Y ++I+GF K+G S L++EM R
Sbjct: 287 MLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDR 346
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+ P+ ++ + V + ++++A + M ++ +P+ +Y +I GLC+ KG M +
Sbjct: 347 GISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI-KGNMVE 405
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L M+ + +Y+ ++ GYC+E N ++ EMV
Sbjct: 406 ASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMV 449
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 134/274 (48%), Gaps = 4/274 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A F + + +YN L+G L R + AE ++ K
Sbjct: 218 LITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM-KRA 276
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
+ P T+ ++ G C G ++ A + ++ + P L+ YN +I+GF K G
Sbjct: 277 HINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVV 336
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + EM +RG P+++TY ++ + +++A + M+ G + T+ ++ G
Sbjct: 337 SELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHG 396
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC+ G +A ++++E ++ P+ Y +ING+CK S +A+ L+EM G+ P
Sbjct: 397 LCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPN 456
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
V S+ + +IL ++G+ A LLK+M + P
Sbjct: 457 VASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 7/211 (3%)
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
RP + NA + + +D K+ M L G + + + L L G D+ G
Sbjct: 39 RPRDAVINASLQSQLLEQSLDGFKL----MVLKGHSPSSFSFNNALDLLAKSGNLDRTWG 94
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
+ + DV S+ + I FC+ G + LL +M G+ P VF + +
Sbjct: 95 FFTEYL-GRTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACC 153
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
NG++D+A ++ +M + N Y +I G KG +D +L +M G +
Sbjct: 154 RNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGF-FKKGYKKDGFELYQKMKLVGVLPNL 212
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
Y+ L+ YC +G + ++ E ++K+G
Sbjct: 213 YTYNSLITEYCRDGKLSLAFKVFDE-ISKRG 242
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 66/217 (30%)
Query: 94 CYTAITDVLLSH----SLISIAASLLKNSNKLSDF-------FISKLIKAYGDRGNVKAA 142
C T D LS+ LI + +L+ + +S F +S+L++ DRG +
Sbjct: 293 CNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSK 352
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ +Y L+ VR + I+ A E FH + + +VP D TY +I
Sbjct: 353 V----------------TYTILMNTFVRSDDIEKAYEMFHLMKRIGLVP-DQHTYGVLIH 395
Query: 203 GYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK-------------------- 239
G C G + A K++ M ++PN + YNTMING+CK+
Sbjct: 396 GLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTP 455
Query: 240 ---------------GELEEAKKCMNEMMNRGCRPNE 261
G+ EAK+ + EM G +P E
Sbjct: 456 NVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPE 492
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 172/327 (52%), Gaps = 12/327 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N+++ L R+ ++ A + I K + P V+TY ++I GYCK G N V
Sbjct: 191 IYTFNTVISGLCRIGQLRKAGDVAKDI-KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVD 249
Query: 218 DVMT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++ + P + + +ING+CK A + EM +G + +TYN++I GL
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G+V+E LM +M G N T +LKG C G A ++ + E N+ PDV
Sbjct: 310 CSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV 369
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
Y ++I+ + ++GK ++A+++ + M +G+ P V ++N + +G+ A LL +
Sbjct: 370 VIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDE 429
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + + V+YN +I LC KG ++ L+D M G + Y+ +++G+C++G
Sbjct: 430 MKEKGIEADVVTYNVLIGALC-CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Query: 452 NVENVMQIAHEMVTKKGRLLKLKNFLT 478
N+++ A+E+ T+ + K N +T
Sbjct: 489 NIKS----AYEIRTRMEKCRKRANVVT 511
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 147/296 (49%), Gaps = 5/296 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y N AA+ F + KQ A + +YNSL+ L ++ + ++
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P ++ T+ +++G+CK GM+ +A D MT V+P+++ YN +I+ + + G++E+A
Sbjct: 330 LSPNEI-TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDA 388
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
M +G PN TYN +I G +G A L+ +M+ G + +V T+ ++
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ +AV L + E + P+ +Y +I GFC G A + M +
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
V ++N + + G++D A LL +M +PN ++Y TI G+ M KG D+
Sbjct: 509 VVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM-MEKGYTPDI 563
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 129/249 (51%), Gaps = 5/249 (2%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P+ + N ++ G ++ A+K + R P+ T+N +I GLC G++ +A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCV---VGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
+ ++ G +V+T+ S++ G C G L+ ++EA ++P ++ V+IN
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G+CK + A+ + +EM+ +G+ +V ++N++ L G+++ + L+++M + P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
N +++ ++ G C KG M D D +D M D +Y+ L+ Y G +E+ M +
Sbjct: 333 NEITFGCVLKGFC-KKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391
Query: 460 AHEMVTKKG 468
E + KKG
Sbjct: 392 -KEAMAKKG 399
>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 190/368 (51%), Gaps = 28/368 (7%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
S+ A +LK + ++ L+K VK A+ FH I G L SY +L+
Sbjct: 31 SVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKAL-HFHD-DVIAKGFRLDNVSYGTLIN 88
Query: 167 VLVRVNSIKLAEEFFHQIV-----KENVVP---------------PDVSTYTTMIRGYCK 206
L + K ++F + ++ K+ +V PDV TY T+I G+C
Sbjct: 89 GLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCI 148
Query: 207 MGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+G +E+A ++F+ M +K PN+ ++N +I+G CK+G+++ K + M+ + +P+ +T
Sbjct: 149 VGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVT 208
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
+++I G + + ++A+ + M NG ++ ++ M+ GL D+AV + +
Sbjct: 209 CSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQ 268
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+M PD +Y +I+G K+G+ L+ EMRA G V +++++ +L ++G D
Sbjct: 269 FKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFD 328
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
AI + ++ PN V+YN ++ GLC GR++D +++ ++ G+ LD +Y+ +
Sbjct: 329 TAIRIFTKIKDKGFEPNMVTYNILVDGLC-KNGRLKDAQEIFHDLLIKGYRLDVRLYTVM 387
Query: 444 LKGYCEEG 451
+ G C E
Sbjct: 388 INGLCREA 395
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 146/292 (50%), Gaps = 25/292 (8%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEEAKKC 248
PD T TT+++G C ++ A D + K L +Y T+ING CK GE + +
Sbjct: 43 PDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQF 102
Query: 249 MNEMM-NRGCR--------------------PNELTYNAMIYGLCINGRVDEAKMLMAKM 287
M M+ NR C+ P+ +TYN +IYG CI G++++A L +M
Sbjct: 103 MYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEM 162
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
RL NV + ++ GLC G L +++ ++ PDV + +I+G+ + K+
Sbjct: 163 RLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKA 222
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
++A + M G+ + S+N + L + +D A++L K+M P+ ++Y+T+
Sbjct: 223 NKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTL 282
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
I GL GR+ V DL+D M +G + + YS LL C+ G+ + ++I
Sbjct: 283 IDGLGKL-GRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRI 333
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 137/288 (47%), Gaps = 17/288 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQA--KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI + G ++ AI F++ K I C S+N L+ L + +K + ++K
Sbjct: 142 LIYGFCIVGQLEDAIRLFNEMRLKNIVPNVC--SFNILIDGLCKEGDVKGGKSVLAVMIK 199
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
++V PDV T +++I GY + A+ +F+ M V +L +YN MING K ++
Sbjct: 200 QSV-KPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVD 258
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA EM + P+ +TY+ +I GL GR+ L+ +MR G NV T+ S+L
Sbjct: 259 EAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLL 318
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC G FD A+ + + P++ +Y ++++G CK G+ +A + ++ +G +
Sbjct: 319 NVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYR 378
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
V + + L D A C PN V+Y II L
Sbjct: 379 LDVRLYTVMINGLCREALFDEA---------YGCTPNAVTYEIIIRAL 417
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++ +++ + +IN F +L A + +++ G +P+ +T ++ GLCIN V +A
Sbjct: 6 IQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKAL 65
Query: 282 MLMAKMRLNGFK-DNVSTHKSMLKGLCVVGKFDQAVGYLRN-----------VMEA---- 325
+ GF+ DNVS + +++ GLC G+ ++ + V++A
Sbjct: 66 HFHDDVIAKGFRLDNVS-YGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLY 124
Query: 326 ------NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ PDV +Y +I GFC +G+ ++AI L EMR + + P V SFN + L +
Sbjct: 125 CEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKE 184
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
G++ +L M + P+ V+ +++I G + K + + + M ++G +D
Sbjct: 185 GDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVK-KANKARYIFNAMAQNGVTIDLRS 243
Query: 440 YSCLLKGYCEEGNVENVMQIAHEM 463
Y+ ++ G + V+ + + EM
Sbjct: 244 YNIMINGLSKAKMVDEAVILFKEM 267
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI G G + + + A + +Y+SLL VL + A F +I K
Sbjct: 280 STLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKI-K 338
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELE 243
+ P++ TY ++ G CK G +++A+++F + +K ++ Y MING C++ +
Sbjct: 339 DKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFD 398
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
EA GC PN +TY +I L N +
Sbjct: 399 EA---------YGCTPNAVTYEIIIRALFKNDK 422
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M L G + ++ ++ + + + A L +++ PD + ++ G C +
Sbjct: 1 MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL-----------------DRAIL-- 387
+A+ ++ A+G + S+ + L ++GE D+ ++
Sbjct: 61 VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDA 120
Query: 388 --LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L +M P+ V+YNT+I G C+ G+++D L + M + ++ L+
Sbjct: 121 YDLYCEMVVKRIFPDVVTYNTLIYGFCIV-GQLEDAIRLFNEMRLKNIVPNVCSFNILID 179
Query: 446 GYCEEGNVENVMQIAHEMVTK 466
G C+EG+V+ + M+ +
Sbjct: 180 GLCKEGDVKGGKSVLAVMIKQ 200
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 174/377 (46%), Gaps = 41/377 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
SK++ N I FH + G LYSYN ++ L R + +A +++K
Sbjct: 73 SKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK 132
Query: 187 ENVVP----------------------------------PDVSTYTTMIRGYCKMGMIEN 212
P PDV Y T+I G CK+G++ +
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 192
Query: 213 AKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
A ++FD M V+ + + YN+++ G C G +A + M +M+ R PN +T+ A+I
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G+ EA L +M +V T+ S++ GLC+ G+ D+A L ++ P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
DV +Y +INGFCK + DE L +EM RGL ++N + + + G D A +
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+M D PN +Y+ ++ GLCM R++ L + M +S LD T Y+ ++ G C+
Sbjct: 373 SRM---DSRPNIRTYSILLYGLCM-NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 450 EGNVENVMQIAHEMVTK 466
GNVE+ + + K
Sbjct: 429 IGNVEDAWDLFRSLSCK 445
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 136/243 (55%), Gaps = 7/243 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +++ V V+ A + + ++ + V PDV TY ++I G C G ++ AK++ D+
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRR-CVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ YNT+INGFCK ++E K EM RG + +TYN +I G GR
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+ + ++M + N+ T+ +L GLC+ + ++A+ N+ ++ + D+ +Y +
Sbjct: 365 PDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G CKIG ++A L + + +GLKP V S+ + + D++ LL ++M +
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 397 CLP 399
LP
Sbjct: 482 LLP 484
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 180/378 (47%), Gaps = 20/378 (5%)
Query: 88 YHHTTPC--------YTAITDVLLSHSLISIAASLLKNSNKLSD----FFISKLIKAYGD 135
+HH C Y + + L S IA S++ K +S LI +
Sbjct: 92 FHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ 151
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
V AI + +++ + YN+++ ++ + A E F ++ ++ V D
Sbjct: 152 GNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV-RADAV 210
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY +++ G C G +A ++ M ++ PN++ + +I+ F K+G+ EA K EM
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
R P+ TYN++I GLC++GRVDEAK ++ M G +V T+ +++ G C +
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D+ R + + + D +Y +I G+ + G+ D A + M +R P + +++ +
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSIL 387
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L N +++A++L + M + + + +YN +I G+C G ++D DL + G
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI-GNVEDAWDLFRSLSCKG 446
Query: 433 HNLDFTMYSCLLKGYCEE 450
D Y+ ++ G+C +
Sbjct: 447 LKPDVVSYTTMISGFCRK 464
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
LEE +M+ P+ + ++ ++ + + D L M + G ++ ++
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ LC +F A+ + +M+ PDV + +INGFC+ + +AI L+ +M G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+P V +N + + G ++ A+ L +M + + V+YN+++ GLC + GR D
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS-GRWSDA 228
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+ M+ + ++ ++ + +EG M++ EM +
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 172/338 (50%), Gaps = 5/338 (1%)
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
IKA+ + GNV Q + + ++ Y L+ R I A+ F ++ +
Sbjct: 114 IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRM-DDLG 172
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+ + YT MI G+ K G ++ +++ M V PNL YN++I +C+ G+L A
Sbjct: 173 LAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAF 232
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
K +E+ RG N +TYN +I GLC G+V +A+ L+ +M+ T ++ GL
Sbjct: 233 KVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGL 292
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+ D+A+ YL + + P + +Y ++I+GF K+G S L++EM RG+ P+
Sbjct: 293 CNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSK 352
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++ + V + ++++A + M ++ +P+ +Y +I GLC+ KG M + L
Sbjct: 353 VTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI-KGNMVEASKLYK 411
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M+ + +Y+ ++ GYC+E N ++ EMV
Sbjct: 412 SMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMV 449
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 134/274 (48%), Gaps = 4/274 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A F + + +YN L+G L R + AE ++ K
Sbjct: 218 LITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM-KRA 276
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
+ P T+ ++ G C G ++ A + ++ + P L+ YN +I+GF K G
Sbjct: 277 HINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVV 336
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + EM +RG P+++TY ++ + +++A + M+ G + T+ ++ G
Sbjct: 337 SELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHG 396
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC+ G +A ++++E ++ P+ Y +ING+CK S +A+ L+EM G+ P
Sbjct: 397 LCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPN 456
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
V S+ + +IL ++G+ A LLK+M + P
Sbjct: 457 VASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 36/274 (13%)
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
++ ++ I FC+ G + + + + +M G PN Y +I C NG +D+AK++
Sbjct: 106 DVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMF 165
Query: 285 AKMR--------------LNGF------KD---------------NVSTHKSMLKGLCVV 309
++M +NGF KD N+ T+ S++ C
Sbjct: 166 SRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRD 225
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
GK A + + + + +Y ++I G C+ G+ +A LL+ M+ + PT +F
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + L G+LD+A+ L+++ + P V+YN +I G G V +LV M
Sbjct: 286 NMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKV-GNSSVVSELVREME 344
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + Y+ L+ + ++E ++ H M
Sbjct: 345 DRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLM 378
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 114/268 (42%), Gaps = 35/268 (13%)
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN------------------------ 265
+ +IN + LE++ M+ +G P+ ++N
Sbjct: 42 DAVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLG 101
Query: 266 ----------AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
I C NG V + L+A+M G NV + +++ C G DQA
Sbjct: 102 RTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQA 161
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ + + + Y ++INGF K G + L ++M+ G+ P ++++N++
Sbjct: 162 KVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITE 221
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
+G+L A + ++ + N V+YN +I GLC KG++ E L++RM R+ N
Sbjct: 222 YCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLC-RKGQVSKAEGLLERMKRAHINP 280
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ L+ G C G ++ + ++
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKL 308
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 66/217 (30%)
Query: 94 CYTAITDVLLSH----SLISIAASLLKNSNKLSDF-------FISKLIKAYGDRGNVKAA 142
C T D LS+ LI + +L+ + +S F +S+L++ DRG +
Sbjct: 293 CNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSK 352
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ +Y L+ VR + I+ A E FH + + +VP D TY +I
Sbjct: 353 V----------------TYTILMNTFVRSDDIEKAYEMFHLMKRIGLVP-DQHTYGVLIH 395
Query: 203 GYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK-------------------- 239
G C G + A K++ M ++PN + YNTMING+CK+
Sbjct: 396 GLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTP 455
Query: 240 ---------------GELEEAKKCMNEMMNRGCRPNE 261
G+ EAK+ + EM G +P E
Sbjct: 456 NVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPE 492
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNXIFMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++ + G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 150/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D ++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNXIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN++ + M+
Sbjct: 301 HCKSGNLDAAADVLKAMI 318
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q+ K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 202/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + ++ L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ +CK G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + + M G +P+ TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ R ++ ++ PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I LC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 154/284 (54%), Gaps = 6/284 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G + A F + + S+N+L+ +++ L E F
Sbjct: 137 YFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGD--LDEGFRLK 194
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKK 239
+++ + V PDV TY+ +I G CK +++A +FD M + PN + + T+I+G CK
Sbjct: 195 SVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKN 254
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + +A+ L+ +M + G K + T+
Sbjct: 255 GRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITY 314
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G + A Y + +++ N+ D +Y +I+ C+ G+S +A +L+EM +
Sbjct: 315 TTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLS 374
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GLKP + ++ + + G++ LLK+M + LPN V+
Sbjct: 375 VGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 177/338 (52%), Gaps = 3/338 (0%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I A D+G V A ++ + A + +++ ++ + + ++ A +++ +
Sbjct: 216 VIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG 275
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
+P V TY +++G C++ + A+ + + + N++ +NT+I G +G+L EA +
Sbjct: 276 CMP-GVMTYGFLLQGLCRVRQADEARAMLGRVP-ELNVVLFNTVIGGCLAEGKLAEATEL 333
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M +GC+P+ TY+ +++GLC GR+ A L+ +M GF NV T+ +L C
Sbjct: 334 YETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 393
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G +D L + + + + Y +I CK G+ DEA+ L++EMR++G P + S
Sbjct: 394 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 453
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + L N +++ A + + + + + N ++YNTII L + GR QD L M
Sbjct: 454 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL-LRDGRWQDAVRLAKEM 512
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
I G +LD Y+ L+K C++GNV+ + + EM K
Sbjct: 513 ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 165/306 (53%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N+++G + + A E + + + PD TY+ ++ G CK+G I +A ++ M
Sbjct: 314 FNTVIGGCLAEGKLAEATELYETMGLKGC-QPDAHTYSILMHGLCKLGRISSAVRLLREM 372
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K PN++ Y +++ FCK G ++ + + EM +G N YN MIY LC +GR+
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DEA L+ +MR G ++ ++ +++ LC + ++A N++E + + +Y +
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ + G+ +A+ L KEM G V S+N + + + ++G +DR+++LL++M +
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN VSYN +I LC + R++D +L +M+ G D Y+ L+ G C+ G + +
Sbjct: 553 KPNNVSYNILISELCKER-RVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 458 QIAHEM 463
+ ++
Sbjct: 612 NLLEKL 617
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 150/309 (48%), Gaps = 40/309 (12%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y+ L+ L ++ I A ++ K+ P +V TYT ++ +CK GM ++ + + +
Sbjct: 347 HTYSILMHGLCKLGRISSAVRLLREMEKKGFAP-NVVTYTIVLHSFCKNGMWDDTRALLE 405
Query: 219 VMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN- 274
M+ K N YN MI CK G ++EA + EM ++GC P+ +YN +IY LC N
Sbjct: 406 EMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 465
Query: 275 ----------------------------------GRVDEAKMLMAKMRLNGFKDNVSTHK 300
GR +A L +M L+G +V ++
Sbjct: 466 QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN 525
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++K +C G D+++ L + E + P+ SY ++I+ CK + +A+ L K+M +
Sbjct: 526 GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 585
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GL P + ++N + L + G + A+ LL+++ + P+ ++YN +I C + + D
Sbjct: 586 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVR-LLDD 644
Query: 421 VEDLVDRMI 429
L++R +
Sbjct: 645 AAMLLNRAM 653
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 133/307 (43%), Gaps = 37/307 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN +L VL R + A + ++V + VPP T+ R C++
Sbjct: 141 SYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRL------------ 188
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
G EA + M GC P+ + Y +I+ LC G V E
Sbjct: 189 --------------------GRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTE 228
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L+ +M L G +V+T +++G+C +G+ +A + +M P V +Y ++
Sbjct: 229 AATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQ 288
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G C++ ++DEA + M R + V FN V + G+L A L + M C P
Sbjct: 289 GLCRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP 344
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ +Y+ ++ GLC GR+ L+ M + G + Y+ +L +C+ G ++ +
Sbjct: 345 DAHTYSILMHGLCKL-GRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL 403
Query: 460 AHEMVTK 466
EM K
Sbjct: 404 LEEMSAK 410
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 181/360 (50%), Gaps = 9/360 (2%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLG 166
S A +LK ++ + LI+ G + A+ F K I G + +Y +L+
Sbjct: 101 SALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFD--KMIGEGFQPNVVTYGTLIN 158
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VK 223
L + + A F +++ + + P++ TY ++I G CK+ ++ + + M +
Sbjct: 159 GLCKDRQVTEAFNIFSEMITKGI-SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 217
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P++ NT+++ CK+G + EA ++ M++RG PN +TYNA++ G C+ VD A +
Sbjct: 218 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 277
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M NV ++ +++ G C + D+A+ + + P+ +Y +I+G C
Sbjct: 278 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 337
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+G+ +AISL EM ARG P + ++ + L +N LD+A+ LLK + + P+
Sbjct: 338 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 397
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y TI+ G+C A G ++D DL + G + Y+ ++ G C++G + ++ EM
Sbjct: 398 YTTILDGMCRA-GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 456
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 167/305 (54%), Gaps = 5/305 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++ N+++ L + + A + ++ V P+V TY ++ G+C ++ A KVF
Sbjct: 220 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV-EPNVVTYNALMDGHCLRNEVDVAVKVF 278
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M K N+++YNT+ING+CK +++A EM + PN +TYN +I+GLC
Sbjct: 279 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 338
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+ +A L +M G ++ T++++ LC D+A+ L+ + +N +PD++ Y
Sbjct: 339 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 398
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++G C+ G+ ++A L + ++GL+P V+++N + L + G L A L +M +
Sbjct: 399 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 458
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C PN +YN I G ++ +E L++ M+ G ++D + + L+ ++G +
Sbjct: 459 NGCSPNDCTYNLITRGFLRNNEALRTIE-LLEEMLARGFSVDVSTTTLLVGMLSDDGLDQ 517
Query: 455 NVMQI 459
+V QI
Sbjct: 518 SVKQI 522
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 166/322 (51%), Gaps = 22/322 (6%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEA 245
+PPDV T +I C + ++ A K+ + +P+ + T+I G C +G++ EA
Sbjct: 76 IPPDVYTLAIVINSLCHLNRVDFAFSALAKILK-LGHQPDATTFTTLIRGLCVEGKIGEA 134
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++M+ G +PN +TY +I GLC + +V EA + ++M G N+ T+ S++ G
Sbjct: 135 LHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHG 194
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + ++ + ++++ + PDV + V++ CK G EA ++ M RG++P
Sbjct: 195 LCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPN 254
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED-- 423
V ++NA+ E+D A+ + M DC+ N +SYNT+I G C ++Q V+
Sbjct: 255 VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYC----KIQSVDKAM 310
Query: 424 -LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLT---- 478
L + M R + Y+ L+ G C G +++ + + HEMV +G++ L + T
Sbjct: 311 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA-RGQIPDLVTYRTLSDY 369
Query: 479 ----RVVD-ALLLMWIVTGGSW 495
R +D A+ L+ + G +W
Sbjct: 370 LCKNRHLDKAMALLKAIEGSNW 391
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 145/274 (52%), Gaps = 5/274 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YNSL+ L + K +++V ++P +V ++T++ CK GMI A V
Sbjct: 673 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP-NVVVFSTVVDALCKEGMIAIAHDVV 731
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D+M V+P+++ Y +++G C + E++EA K + M+++GC PN +YN +I G C
Sbjct: 732 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 791
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+D+A L+ +M L G + T+ +++ GLC VG+ A+ ++ + PD+ +Y
Sbjct: 792 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 851
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++ CK EA+ LLK + L + +N + GEL+ A L +
Sbjct: 852 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 911
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
P+ +YN +I GLC +G + + L +M
Sbjct: 912 KGLQPDVRTYNIMIHGLC-KRGLLDEANKLFRKM 944
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 136/246 (55%), Gaps = 4/246 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+++++ L + I +A + ++K V PDV TYT ++ G+C ++ A KVFD M
Sbjct: 711 FSTVVDALCKEGMIAIAHDVVDMMIKRGV-EPDVVTYTALMDGHCLRSEMDEAVKVFDTM 769
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K PN+ +YN +ING+C+ +++A + +M +G + +TYN +I+GLC GR+
Sbjct: 770 VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRL 829
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A L +M +G ++ T++ +L LC +A+ L+ + +N++ D+ Y +
Sbjct: 830 QHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIA 889
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G C+ G+ + A L + ++GL+P V ++N + L + G LD A L ++M + D
Sbjct: 890 IDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDI 949
Query: 398 LPNFVS 403
N S
Sbjct: 950 WSNSTS 955
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 149/309 (48%), Gaps = 12/309 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ N L+ + + A +++K PDV TY T++ G CKM
Sbjct: 616 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGF-QPDVVTYGTLMNGLCKM---------- 664
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P++ YN++I+ C E + +NEM+N PN + ++ ++ LC G +
Sbjct: 665 ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMI 724
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A ++ M G + +V T+ +++ G C+ + D+AV ++ P+V+SY ++
Sbjct: 725 AIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 784
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
ING+C+I + D+A+ LL++M +GL ++N + L G L AI L +M
Sbjct: 785 INGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 844
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ V+Y ++ LC + + L+ + S + D +Y+ + G C G +E
Sbjct: 845 IPDLVTYRILLDYLC-KNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAAR 903
Query: 458 QIAHEMVTK 466
+ + +K
Sbjct: 904 DLFSNLSSK 912
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 172/440 (39%), Gaps = 101/440 (22%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y +V A++ F + + E +YN+L+ L V ++ A FH++V
Sbjct: 296 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 355
Query: 189 VVP----------------------------------PDVSTYTTMIRGYCKMGMIENAK 214
+P PD+ YTT++ G C+ G +E+A+
Sbjct: 356 QIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDAR 415
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+F ++ K PN+ YN MI+G CK+G L EA K +EM GC PN+ TYN + G
Sbjct: 416 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGF 475
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ----------------- 314
N L+ +M GF +VST ++L G+ DQ
Sbjct: 476 LRNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDDGLDQSVKQILCKPSSSSRPSG 534
Query: 315 ------------------------------AVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
A+ ++ + P + ++ K+
Sbjct: 535 TQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKM 594
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
+SL +M + G+ P V++ N + L A +L ++ ++ P+ V+Y
Sbjct: 595 KHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTY 654
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
T++ GLC +MI G + D Y+ L+ C ++V + +EMV
Sbjct: 655 GTLMNGLC--------------KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 700
Query: 465 TKKGRLLKLKNFLTRVVDAL 484
K ++ + VVDAL
Sbjct: 701 NSK--IMPNVVVFSTVVDAL 718
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK---KV 216
+YN+L+ L V ++ A FH++V +P D+ TY ++ CK + A K
Sbjct: 815 TYNTLIHGLCHVGRLQHAIALFHEMVASGQIP-DLVTYRILLDYLCKNHHLAEAMVLLKA 873
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ + ++L YN I+G C+ GELE A+ + + ++G +P+ TYN MI+GLC G
Sbjct: 874 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL 933
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKS 301
+DEA L KM N N ++ ++
Sbjct: 934 LDEANKLFRKMDENDIWSNSTSSRN 958
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 167/313 (53%), Gaps = 5/313 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+ +++ R + A +F ++ K + D TYT +I G C+ G ++ A++V M
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAA-DGVTYTALINGLCRAGELKEAERVLQEM 416
Query: 221 TVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K + + Y +I+G+CK G++ EA N+M+ + PN +TY A+ GLC G V
Sbjct: 417 EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDV 476
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A L+ +M G + N+ T+ S++ GLC G +QA+ + ++ EA + PDV +Y +
Sbjct: 477 CAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTI 536
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I C+ + D A SLL+EM +G+KPT+ ++N + +G ++ LL+ M + +
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +YN+++ C+ K M+ ++ M+ + Y+ L+KG+C+ N++ +
Sbjct: 597 HPNTTTYNSLMKQYCIEKN-MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL 655
Query: 458 QIAHEMVTKKGRL 470
EM+ K RL
Sbjct: 656 YFHSEMIEKGFRL 668
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 151/298 (50%), Gaps = 7/298 (2%)
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPN 225
VL R+ + A + F ++ ++N +Y +++ C G I++A ++FD M P+
Sbjct: 231 AVLCRL-PLDEAVQLFQELPEKNTC-----SYNILLKALCTAGRIKDAHQLFDEMASPPD 284
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++ Y M++G+C ELE A K ++EM RG N + Y ++I LC G+V +A ++
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVE 344
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
M ++G + + +++ G C G A + + + + D +Y +ING C+ G
Sbjct: 345 DMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAG 404
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ EA +L+EM +GL ++ + + G++ A L+ +M Q PN V+Y
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYT 464
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ GLC +G + +L+ M G L+ Y+ L+ G C+ GN+E M+ +M
Sbjct: 465 ALSDGLC-KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 130/267 (48%), Gaps = 4/267 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A ++ Q + +Y +L L + + A E H++ +
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ ++ TY ++I G CK G +E A + D +KP++ Y T+I C+ EL+ A
Sbjct: 491 L-ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ EM+++G +P +TYN ++ G C++GRV+ K L+ M N +T+ S++K
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C+ + ++ + P+ +Y ++I G CK EA+ EM +G + T
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 366 VFSFNAVFRILVENGELDRAILLLKQM 392
S+NA+ R+L + + A L ++M
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 10/241 (4%)
Query: 136 RGNVKAAIFWFHQ--AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
+G+V AA H+ +K +E +++YNSL+ L + +++ A + E + PD
Sbjct: 473 QGDVCAANELLHEMCSKGLELN--IFTYNSLINGLCKAGNLEQAMRTMIDM-DEAGLKPD 529
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
V TYTT+I C+ ++ A + M +KP ++ YN ++NGFC G +E K+ +
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M+ + PN TYN+++ CI + + M N +T+ ++KG C
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL--KPTVFS 368
+A+ + ++E SY +I K K EA L ++MR L +P V++
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYN 709
Query: 369 F 369
F
Sbjct: 710 F 710
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 198/415 (47%), Gaps = 29/415 (6%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL------------------ 115
FF W S+P + + HT Y + L +H ++S A SL+
Sbjct: 1 FFTWLSSPANST--FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSAXAVFAA 58
Query: 116 ----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
K + + + S LI Y + G ++ AI + ++ + + +L L+++
Sbjct: 59 IXETKGTQRXDIYVFSGLITTYLESGFLRDAIECYRLTREHKLRVPFDTCKKVLEHLMKL 118
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
KL F I + ++ +CK G I A+ VFD + ++P++++
Sbjct: 119 KYFKLVWGFXXXIXXXGXXXX-XXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVS 177
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT++NG+ + G+L E + + M+ G +P+ TY+ +I GLC ++D+A L +M
Sbjct: 178 YNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 237
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 238 VKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 297
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A L+ EM +GLK ++ + + G+LD A K+M Q + + V+Y +I
Sbjct: 298 QAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALI 357
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ +M
Sbjct: 358 SGLC-QEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDM 411
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 158/290 (54%), Gaps = 6/290 (2%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FHQ 183
F + L+ + G+++ A F + + SYN+L+ +R+ L E F
Sbjct: 142 FFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGD--LNEGFRLKS 199
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+ + V PDV TY+ +I G CK +++A ++FD M VK PN + + T+I+G CK G
Sbjct: 200 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNG 259
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M + G K + T+
Sbjct: 260 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYT 319
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G C G D A + + +++ N+ D +Y +I+G C+ G+S +A +L+EM +
Sbjct: 320 TLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 379
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GLKP ++ + + G++ + LLK M + P+ V+YN ++ G
Sbjct: 380 GLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 166/335 (49%), Gaps = 10/335 (2%)
Query: 137 GNVKAAIF---WFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP 191
G VK F W + GA + +Y +L+ R A F +++++ + P
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP 226
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
V YT +IRG C I A+ +F M + PNL YNTM++G+CK +++A +
Sbjct: 227 T-VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
EM+ G PN +T+ +I GLC + A+ + M G N+ + ++ G C
Sbjct: 286 YXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G +A+ + + + PDV +Y ++I G C + + +EA LL+EM+ +G P +
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + + G +++AI + QM + PN ++++T+I G C A G+M+ L M
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA-GKMEAAMGLYTEM 464
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G D Y+ L+ G+ ++GN + ++ EM
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 175/353 (49%), Gaps = 8/353 (2%)
Query: 117 NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKL 176
S+K + LI A+ + G V+ A++ +++ + + + N +L LV+
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDT 176
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMI 233
+ + +V P+V TY T+I G C+ G A ++FD M K P ++ Y +I
Sbjct: 177 MWKVYGDMVARGA-SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILI 235
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
G C + + EA+ M N G PN TYN M+ G C V +A L +M +G
Sbjct: 236 RGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLL 295
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
NV T ++ GLC + A +L ++ + P++ Y +I+G+CK G EA+SL
Sbjct: 296 PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
E+ + P VF+++ + + L ++ A LL++M + LPN V+YNT+I G C
Sbjct: 356 HSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC- 414
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+G M+ ++ +M G + +S L+ GYC+ G +E M + EMV K
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 164/312 (52%), Gaps = 18/312 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+YN+++ ++ +K A E + +++ + ++P +V T+ +I G CK + +A+K
Sbjct: 263 LYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLP-NVVTFGILIDGLCKTDEMVSARKFL 321
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V PN+ YN +I+G+CK G L EA +E+ P+ TY+ +I GLC
Sbjct: 322 IDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGV 381
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R++EA L+ +M+ GF N T+ +++ G C G ++A+ + E + P++ ++
Sbjct: 382 DRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G+CK GK + A+ L EM +GL P V ++ A+ ++G A L K+M +
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDL-------------VDRMIRSGHNLDFTMYS 441
PN + + +I GLC GR+ D L + + RS + + MY+
Sbjct: 502 AGLHPNVFTLSCLIDGLC-KDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560
Query: 442 CLLKGYCEEGNV 453
L++G C +G +
Sbjct: 561 ALIQGLCTDGRI 572
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 188/377 (49%), Gaps = 19/377 (5%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
Y+AI VL L + A L+++ LI+ + F+ ++E+
Sbjct: 73 YSAIIHVLTGAKLYAKARCLMRD-----------LIQCLQKSRRSRICCSVFNVLSRLES 121
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
++ N +++ + + L EE K +V+P + ++ G K G +
Sbjct: 122 SK--FTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPA-MQACNMVLDGLVKKGRFDTMW 178
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
KV+ M + PN++ Y T+I+G C++G+ +A + +EM+ + P + Y +I GL
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGL 238
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C R+ EA+ + MR +G N+ T+ +M+ G C + +A+ ++ + P+V
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNV 298
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
++ ++I+G CK + A L +M + G+ P +F +N + + G L A+ L +
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ + + LP+ +Y+ +I GLC RM++ + L+ M + G + Y+ L+ GYC+EG
Sbjct: 359 IEKHEILPDVFTYSILIKGLC-GVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEG 417
Query: 452 NVENVMQIAHEMVTKKG 468
N+E +++ +M T+KG
Sbjct: 418 NMEKAIEVCSQM-TEKG 433
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 194/437 (44%), Gaps = 61/437 (13%)
Query: 91 TTPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWF 146
T YT + L S IS A S+ ++NS L + + + ++ Y +VK A+ +
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286
Query: 147 HQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
+ + +G + ++ L+ L + + + A +F + VVP ++ Y +I GY
Sbjct: 287 XE--MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP-NIFVYNCLIDGY 343
Query: 205 CKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
CK G + A + + + P++ Y+ +I G C +EEA + EM +G PN
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+TYN +I G C G +++A + ++M G + N+ T +++ G C GK + A+G
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
++ + PDV +Y +I+G K G + EA L KEM+ GL P VF+ + + L ++G
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523
Query: 382 LDRAILLLKQMPQMD-------------CLPNFVSYNTIICGLCMAKGR----------- 417
+ AI L D C PN V Y +I GLC GR
Sbjct: 524 ISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLC-TDGRIFKASKFFSDM 582
Query: 418 ------------------------MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
++DV L +++ G + ++Y L KGY E G +
Sbjct: 583 RCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYL 642
Query: 454 ENVMQIAHEMVTKKGRL 470
++ + E V R+
Sbjct: 643 KSALSFCGEGVQPLDRV 659
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 124/296 (41%), Gaps = 33/296 (11%)
Query: 126 ISKLIKAYGDRGNVKA--AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
I K + G +G+ + A+ F Q + + + + L + ++ + E + H
Sbjct: 715 ILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGE-WIHA 773
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELE 243
++ + D+ ++I Y K G I A+++FD T K ++ + +MI G G+ E
Sbjct: 774 YIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFD-GTQKKDVTTWTSMIVGHALHGQAE 832
Query: 244 EAKKCMNEM--MNRGCR--------------PNELTYNAMIYGLCINGRVDEAKMLMAKM 287
EA + EM N+ R PN++T+ ++ G V+E K M
Sbjct: 833 EALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSM 892
Query: 288 RLN-GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI-- 344
+ + + +S M+ LC G +A + +++ + P+ + ++ G C +
Sbjct: 893 KEDYSLRPRISHFGCMVDLLCRAGLLTEAYEF---ILKMPVRPNAVVWRTLL-GACSLQG 948
Query: 345 ---GKSDEAISLLKEMRAR--GLKPTVFSFNAVFR-ILVENGELDRAILLLKQMPQ 394
G + I + E R + L+P+ N + + G D+ +L+ Q+ Q
Sbjct: 949 DSNGNGNSNIKIXSEARRQLLELEPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQ 1004
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 163/313 (52%), Gaps = 10/313 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N+LL L N +K A F ++V+EN+ P+ Y T++ G CK G + +K FD++
Sbjct: 145 FNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKG---HTQKAFDLL 201
Query: 221 ------TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ KPN Y+ +I+ FCK G L+ A +NEM + P+ TY+ +I LC
Sbjct: 202 RLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKL 261
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+ + + L +M NV T S++ GLC GK + A +R ++E ++PDV +Y
Sbjct: 262 SQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITY 321
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I+G+ G+ D A + M + ++P + S+N + ++D A+ + +++ Q
Sbjct: 322 NMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQ 381
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ V+ N ++ GL GR + ++ D M+ +GH D + LL GY + G VE
Sbjct: 382 KGLKPSIVTCNVLLHGL-FELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVE 440
Query: 455 NVMQIAHEMVTKK 467
M H++ ++
Sbjct: 441 EAMSHFHKLERRR 453
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 150/282 (53%), Gaps = 4/282 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGE 241
+K+ +PPD+ TY+T+I CK+ EN + +F M + PN+ +N++I+G CK+G+
Sbjct: 239 MKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGK 298
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+E+A++ M M+ +G P+ +TYN +I G + G+VD A+ + M + N+ ++
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNI 358
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G K D+A+ R + + + P + + V+++G ++G++ A + EM + G
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P +++ + +NG ++ A+ ++ + N Y +I GLC G++
Sbjct: 419 HIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLC-KNGKLDKA 477
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+++ G + D Y+ ++ GYC+EG ++ + +M
Sbjct: 478 HATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM 519
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 167/327 (51%), Gaps = 8/327 (2%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLKNSNKLS---DFFI-SKLIKAYGDRGNVKAAIFWFH 147
T Y+ + D ++ A SLL + S D F S LI A + F
Sbjct: 213 TCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFL 272
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ + + ++NS++ L + ++ AEE ++ E V PDV TY +I GY
Sbjct: 273 EMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMI-EKGVDPDVITYNMIIDGYGLR 331
Query: 208 GMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G ++ A+++FD M +++PN+++YN +ING+ ++ +++EA + E+ +G +P+ +T
Sbjct: 332 GQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTC 391
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +++GL GR A+ +M G ++ TH ++L G G ++A+ + +
Sbjct: 392 NVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLER 451
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ +++ Y VI+G CK GK D+A + +++ GL P V ++ A+ + G LD
Sbjct: 452 RREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDE 511
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGL 411
A +L++M CL + +YN I+ G
Sbjct: 512 AKDMLRKMEDNGCLADNRTYNVIVRGF 538
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 117/279 (41%), Gaps = 37/279 (13%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P++++++ ++ E+ +E + ++ C+ R D +
Sbjct: 70 PSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSV 129
Query: 284 MAKMRLNGFKDNVSTHKSMLKGL------------------------------------C 307
+A G N ++L+GL C
Sbjct: 130 LAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLC 189
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G +A LR + + + P+ Y +VI+ FCK G D A SLL EM+ + + P +F
Sbjct: 190 KKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIF 249
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+++ + L + + + L +M ++ PN ++N++I GLC +G+++D E+++
Sbjct: 250 TYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLC-KEGKVEDAEEIMRY 308
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI G + D Y+ ++ GY G V+ +I M+ K
Sbjct: 309 MIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINK 347
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 2/191 (1%)
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D+A L +M +V + +LK L + + V R + + + +
Sbjct: 53 LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
V+N C + ++D S+L +G+ FN + R L ++ A+ L K++ + +
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172
Query: 397 -CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C PN V Y T++ GLC KG Q DL+ M + + +YS ++ +C++G ++
Sbjct: 173 ICEPNEVMYGTVMNGLC-KKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDG 231
Query: 456 VMQIAHEMVTK 466
+ +EM K
Sbjct: 232 ATSLLNEMKQK 242
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 164/345 (47%), Gaps = 17/345 (4%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ ++LA + F + + +P +V TYT +I G+CK G +E A ++ M
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLP-NVRTYTQLICGFCKSGKVERAMVLYSRM 275
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN++ Y T+I G C +G LE A + ++ M G PNE T +I LC +GR+
Sbjct: 276 IEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRI 335
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA+ + + G K N + SM+ LC GKFD A ++ ++ PD Y +
Sbjct: 336 EEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSL 395
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G C+ K EAISLL +M G++ F + + D ++ +M
Sbjct: 396 IDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGV 455
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ V+Y I C GRM+D E ++ +MI G + T Y+ L+KGY G V
Sbjct: 456 KPDVVTYTVFIRSYCQ-DGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAF 514
Query: 458 QIAHEMVTKK------------GRLLKLKNFLTRVVDALLLMWIV 490
M+ G LLK ++ V D++ L IV
Sbjct: 515 SSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIV 559
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 150/310 (48%), Gaps = 21/310 (6%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
VPP + T++ + GM+ + + + M V+ NL Y T+IN +C G+L AK+ +
Sbjct: 40 VPP-IRCLNTLLMALARHGMLSDMESLAARMPVR-NLHTYTTLINAYCHAGDLPAAKRHL 97
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+ ++ G P+ Y + + G C G A L M G T+ ++L+GLC
Sbjct: 98 SSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGA 157
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G +A+ + PD Y ++++G C G++ EA++LL + +G P V +
Sbjct: 158 GMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVY 217
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
NA+ G+L+ AI + K M CLPN +Y +ICG C + G+++ L RMI
Sbjct: 218 NALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKS-GKVERAMVLYSRMI 276
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM------------------VTKKGRLL 471
+G + Y+ L++G C EG++E+ ++ H M + K GR+
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIE 336
Query: 472 KLKNFLTRVV 481
+ + FL +V
Sbjct: 337 EAQQFLGSLV 346
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 159/348 (45%), Gaps = 38/348 (10%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF- 217
++Y +LL L ++ A F + + P D Y+ M+ G C G A +
Sbjct: 145 FTYAALLQGLCGAGMVREAMAVFAGMWPDGCAP-DSHVYSIMVHGLCGAGRAGEAVALLT 203
Query: 218 DVMT--VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
D M PN+ YN +I+G+C G+LE A M ++GC PN TY +I G C +G
Sbjct: 204 DAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSG 263
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+V+ A +L ++M G NV T+ ++++G C G + A L ++ + P+ +
Sbjct: 264 KVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCL 323
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
V+I+ CK G+ +EA L + +G+K + ++ L ++G+ D A L++++
Sbjct: 324 VLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITE 383
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVE---DLV--------------------------- 425
+P+ Y+++I GLC ++ + D++
Sbjct: 384 GFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSP 443
Query: 426 ----DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
DRM +G D Y+ ++ YC++G +E+ + +M+ R
Sbjct: 444 KMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVR 491
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 162/393 (41%), Gaps = 41/393 (10%)
Query: 98 ITDVLLSHSLISIA----ASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQ-- 151
+ D L H I A SL++ K++ + +I A G A H Q
Sbjct: 325 LIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGA----HNLMQKI 380
Query: 152 IENGAC--LYSYNSLLGVLVRVN----SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
I G + Y+SL+ L R N +I L + V+ N VP +T +I +
Sbjct: 381 ITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVP-----FTILIDKHL 435
Query: 206 KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
+ ++ K + D M VKP+++ Y I +C+ G +E+A+ M +M++ G RPN
Sbjct: 436 REFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLT 495
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG----- 317
TYN +I G G V +A + M NG K N ++ +L L + V
Sbjct: 496 TYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISL 555
Query: 318 -----------YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
L V++ + Y+ I K+ + +EA S L M++ L P+
Sbjct: 556 WKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSE 615
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+ + L A+ L M + + LP SY IIC LC +G + +
Sbjct: 616 DVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALC-EEGSFHTAKSIFG 674
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
++ +N D + L+ G ++GN + ++
Sbjct: 675 DILSKEYNRDEIAWKILIDGLLQKGNTADCSRL 707
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 169/396 (42%), Gaps = 58/396 (14%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI+ G+++ A H + ++ L+ L + I+ A++F +V+
Sbjct: 288 TTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQ 347
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ + V YT+MI CK G + A + + + P+ Y+++I+G C++ +L
Sbjct: 348 KGIKVNQV-IYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLL 406
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA +N+M+ G + N + + +I R D KM+ +M G K +V T+ +
Sbjct: 407 EAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFI 466
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+ C G+ + A + +++ + P++ +Y +I G+ +G +A S LK M G K
Sbjct: 467 RSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCK 526
Query: 364 PTVFSFNAVFRILVENGE--------------LDRAIL--LLKQMPQMDCLPNFVSYNTI 407
P S+ + +L++ +D +L LL+++ ++ C Y+
Sbjct: 527 PNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCF 586
Query: 408 ICGLCMAK-GRMQDV---------------EDL--------------------VDRMIRS 431
I C++K R+++ ED+ +D M++
Sbjct: 587 I--RCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKR 644
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ Y ++ CEEG+ I ++++K+
Sbjct: 645 NYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKE 680
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 23/239 (9%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LIK Y + G V A F K + + C SY LLG+L++ NS +H +V
Sbjct: 500 LIKGYANLGLVSQA---FSSLKNMIDNGCKPNDESYTVLLGLLLKKNS-------YHDLV 549
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEA 245
+++ S + + M ++E + + Y+ I K LEEA
Sbjct: 550 ADSI-----SLWKIV-----DMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEA 599
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + M + P+E Y MI + EA + M + + +++ ++
Sbjct: 600 KSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICA 659
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
LC G F A +++ N D +++++I+G + G + + LL M + +P
Sbjct: 660 LCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRP 718
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-DV 219
Y ++ R+ +K A F +VK N +P + +Y +I C+ G AK +F D+
Sbjct: 618 YTCMIECCYRMKLLKEALRFLDSMVKRNYLP-RLESYRFIICALCEEGSFHTAKSIFGDI 676
Query: 220 MTVKPNL--LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
++ + N +A+ +I+G +KG + + ++ M + CRP Y+ + + +
Sbjct: 677 LSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEITVTSEA 736
Query: 278 DE 279
E
Sbjct: 737 QE 738
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 204/440 (46%), Gaps = 26/440 (5%)
Query: 43 SQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNP-NPNK-YHHTTPCYTAITD 100
S+P+ F L ++ Q +P AL F NPNP P+K + ++ Y I
Sbjct: 4 SRPITPFRL-------ASLLRLQKDPKLALQLF---KNPNPKTPSKPFRYSLLSYDLIIT 53
Query: 101 VLLSHSLISIAASLLKNSNKLSDF-----FISKLIKAYGDRGNVKAAIFWFHQAKQIENG 155
L + + +L + + F +I YG + A+ +
Sbjct: 54 KLGRAKMFNEMQEILAQLKEETLFTPKEALFCDIINFYGRARLPENALKLLVELPSFRVQ 113
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
+ SYNSLL V + E F I E + D TY +IRG+C G +++A K
Sbjct: 114 RTVKSYNSLLSVFLMCKDFDKMRELFVGI--EKLGKADACTYNLLIRGFCASGRLDDASK 171
Query: 216 VFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN-RGCRPNELTYNAMIYGL 271
VFD MT V PN++ + +I GFC L+EA K +M+ PN Y ++I G+
Sbjct: 172 VFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYASLIKGV 231
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C NG + A L +M N + + + + +++ GL G+ ++A+G ++ E PD
Sbjct: 232 CKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERGYKPDT 291
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y V+IN FCK + A LL EM +G KP V S+N + R L E G+ A L +
Sbjct: 292 VTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLFED 351
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
MP+ C P+ VSY + G C + ++ ++D MI G + + C EG
Sbjct: 352 MPRRGCAPDVVSYRILFDGFCNGM-QFKEAAFILDEMIFKGF-VPCSASICKFVNRLCEG 409
Query: 452 NVENVMQIAHEMVTKKGRLL 471
E++++ A + +KG+L+
Sbjct: 410 KNEDLLRSAFNTL-EKGKLV 428
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 165/313 (52%), Gaps = 5/313 (1%)
Query: 157 CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
CL ++N LL VL + +K E+ +++K V+ P++ TY I+G C+ G ++ A ++
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVL-PNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 217 FDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
+ KP+++ YN +I G CK + +EA+ + +M+N G P+ TYN +I G C
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G V A+ ++ NGF + T++S++ GLC G+ ++A+ + + P+V
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I G G EA L EM +GL P V +FN + L + G + A L+K M
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
P+ ++N +I G + +M++ +++D M+ +G + D Y+ LL G C+
Sbjct: 454 SKGYFPDIFTFNILIHGYS-TQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 454 ENVMQIAHEMVTK 466
E+VM+ MV K
Sbjct: 513 EDVMETYKTMVEK 525
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 213/485 (43%), Gaps = 84/485 (17%)
Query: 58 VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN 117
VT VI Q +P AL FN + HT Y ++ + L + +L +
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEV----GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVD 65
Query: 118 -----SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
N + + +K YG +G V+ A+ F + + ++SYN+++ VLV
Sbjct: 66 MRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSG 125
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAY 229
A + + ++ ++ + PDV ++T ++ +CK A ++ + M+ + N++AY
Sbjct: 126 YFDQAHKVYMRM-RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 230 NTMINGF-----------------------------------CKKGELEEAKKCMNEMMN 254
T++ GF CKKG+++E +K +++++
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
RG PN TYN I GLC G +D A ++ + G K +V T+ +++ GLC KF +
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCK------------------------------- 343
A YL ++ + PD +Y +I G+CK
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Query: 344 ----IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G+++ A++L E +G+KP V +N + + L G + A L +M + +P
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIP 424
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
++N ++ GLC G + D + LV MI G+ D ++ L+ GY + +EN ++I
Sbjct: 425 EVQTFNILVNGLC-KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 460 AHEMV 464
M+
Sbjct: 484 LDVML 488
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 155/312 (49%), Gaps = 6/312 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN+L+ + ++LAE V VP D TY ++I G C G A +F+
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP-DQFTYRSLIDGLCHEGETNRALALFN 380
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+KPN++ YNT+I G +G + EA + NEM +G P T+N ++ GLC G
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
V +A L+ M G+ ++ T ++ G K + A+ L +++ ++PDV +Y
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++NG CK K ++ + K M +G P +F+FN + L +LD A+ LL++M
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT-MYSCLLKGYCEEGNVE 454
P+ V++ T+I G C G + L +M + T Y+ ++ + E+ NV
Sbjct: 561 SVNPDAVTFGTLIDGFC-KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVT 619
Query: 455 NVMQIAHEMVTK 466
++ EMV +
Sbjct: 620 MAEKLFQEMVDR 631
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 163/329 (49%), Gaps = 6/329 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y SL+ L A F++ + + + P+V Y T+I+G GMI A ++ +
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGI-KPNVILYNTLIKGLSNQGMILEAAQLAN 415
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M+ K P + +N ++NG CK G + +A + M+++G P+ T+N +I+G
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+++ A ++ M NG +V T+ S+L GLC KF+ + + ++E P++ ++
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++ C+ K DEA+ LL+EM+ + + P +F + +NG+LD A L ++M +
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ + II K + E L M+ D Y ++ G+C+ GNV
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL 655
Query: 456 VMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
+ EM+ + G + L L RV++ L
Sbjct: 656 GYKFLLEMM-ENGFIPSLTT-LGRVINCL 682
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 42/287 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ L ++ + A+ ++ + P D+ T+ +I GY +ENA ++ DV
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFP-DIFTFNILIHGYSTQLKMENALEILDV 486
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P++ YN+++NG CK + E+ + M+ +GC PN T+N ++ LC +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN---------- 326
+DEA L+ +M+ + T +++ G C G D A R + EA
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Query: 327 --------------------------MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+ PD +Y ++++GFCK G + L EM
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
G P++ + V L + A ++ +M Q +P V NTI
Sbjct: 667 GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTI 711
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L+++N LL L R + A ++ K V PD T+ T+I G+CK G ++ A +F
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEM-KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 218 DVMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
M V + YN +I+ F +K + A+K EM++R P+ TY M+ G C
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G V+ + +M NGF +++T ++ LCV + +A G + +++ + P+
Sbjct: 650 TGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE--- 706
Query: 334 YEVVINGFCKIGKSDEA 350
+N C + K + A
Sbjct: 707 ---AVNTICDVDKKEVA 720
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 177/378 (46%), Gaps = 40/378 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I + G V A F F + + +Y+SL+ L + ++ AE +
Sbjct: 207 STIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFD 266
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ V+P + TY MIRGYC +G +E A ++ M+ ++P+++ Y +I +CK G
Sbjct: 267 KGVMP-NTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCA 325
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYG--------------------------------L 271
EA+ + M+ +G +PN Y+ +++G +
Sbjct: 326 EARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILI 385
Query: 272 CI---NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
C +G VD+A +MR NG + +V ++ +++ LC +G+ + AV + ++ ++
Sbjct: 386 CAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLS 445
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P++ S+ +I+G C IG+ + L EM RG+ P N + L + G + A
Sbjct: 446 PNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 505
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+ + PN VSYNT+I G C G+M + DRM+ G D Y+ LL GY
Sbjct: 506 FDMVIHIGVKPNVVSYNTLIDGYCFV-GKMDESIKQFDRMVSIGLRPDSWTYNALLNGYF 564
Query: 449 EEGNVENVMQIAHEMVTK 466
+ G VE+ + + EM K
Sbjct: 565 KNGRVEDALALYREMFRK 582
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 186/373 (49%), Gaps = 60/373 (16%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTV------KPNLLAYNTMINGFCKKGELEEA 245
PDV +Y +I+G C + A ++ MT PN+++Y+T+I+GF K+GE+++A
Sbjct: 163 PDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKA 222
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+EM+ +G P+ +TY+++I GLC +++A+ ++ M G N T+ M++G
Sbjct: 223 YFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRG 282
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP- 364
C +G+ ++AV L+ + + + PDV +Y ++I +CKIG+ EA S+ M +G KP
Sbjct: 283 YCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPN 342
Query: 365 -TVF---------------------------------SFNAVFRILVENGELDRAILLLK 390
T++ +FN + ++G +D+A+
Sbjct: 343 STIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFT 402
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M Q P+ VSY+T+I LC GR++D ++M+ G + + ++ L+ G C
Sbjct: 403 EMRQNGLRPDVVSYSTVIHILCKI-GRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSI 461
Query: 451 GNVENVMQIAHEMVT------------------KKGRLLKLKNFLTRVVDALLLMWIVTG 492
G + V ++A EM+ K+GR+++ ++F V+ + +V+
Sbjct: 462 GEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSY 521
Query: 493 GSWISRFVFVHQV 505
+ I + FV ++
Sbjct: 522 NTLIDGYCFVGKM 534
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 183/358 (51%), Gaps = 13/358 (3%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G V+ A++ F+Q + S+ SL+ L + K EE +++ + PD
Sbjct: 427 GRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGI-HPDAIF 485
Query: 197 YTTMIRGYCKMGMIENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
T++ CK G + A+ FD+ + VKPN+++YNT+I+G+C G+++E+ K + M+
Sbjct: 486 MNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMV 545
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+ G RP+ TYNA++ G NGRV++A L +M K T +L GL G+
Sbjct: 546 SIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIV 605
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A +++ +++Y V+ G C+ DEA+ + +++R++ + V++FN V
Sbjct: 606 AARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVI 665
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L++ G +D A L M +P+ ++Y+ +I + +G +++ +DL M ++G
Sbjct: 666 NALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSR-IEEGLLEESDDLFLSMEKNGC 724
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVT 491
D M + +++ E+G+V A +TK + KNF A LL+ IV+
Sbjct: 725 AADSHMLNVIIRRLLEKGDVRR----AGTYLTK----IDEKNFSVEASTAALLIPIVS 774
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 161/332 (48%), Gaps = 38/332 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ + ++ A F ++ ++N + PDV +Y+T+I CK+G +E+A F+
Sbjct: 380 AFNILICAYAKHGAVDKAMTAFTEM-RQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQ 438
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + PN++++ ++I+G C GE ++ ++ EM+NRG P+ + N ++ LC GR
Sbjct: 439 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 498
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V EA+ + G K NV ++ +++ G C VGK D+++ ++ + PD +Y
Sbjct: 499 VVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNA 558
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++NG+ K G+ ++A++L +EM + +K + N + L + G + A L +M
Sbjct: 559 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRG 618
Query: 397 CLPNFVSYNTIICGLC----------------------------------MAKGRMQDVE 422
+YNT++ GLC + GR+ + +
Sbjct: 619 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAK 678
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
L M+ G YS ++K EEG +E
Sbjct: 679 SLFSAMVLRGPVPHVITYSLMIKSRIEEGLLE 710
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 147/315 (46%), Gaps = 28/315 (8%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
A ++++NS+L V+ R +S + VS + TM R M
Sbjct: 47 ASVHAFNSVLTVVARADS---------SSSPRHSAALAVSLFNTMARSGVNM-------- 89
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ N +I FC G L+ A + G R +T N +I GLC
Sbjct: 90 ------MAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGK 143
Query: 276 RVDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA---NMNPDV 331
R D+A M+ +M G+ +V ++ +++KGLCV K +A+ L ++ N +P+V
Sbjct: 144 RTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNV 203
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
SY +I+GF K G+ D+A L EM +G P V +++++ L + +++A +L+
Sbjct: 204 VSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQH 263
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M +PN +YN +I G C + G++++ L+ +M SG D Y L++ YC+ G
Sbjct: 264 MFDKGVMPNTRTYNIMIRGYC-SLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIG 322
Query: 452 NVENVMQIAHEMVTK 466
+ MV K
Sbjct: 323 RCAEARSVFDSMVRK 337
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 49/123 (39%), Gaps = 5/123 (4%)
Query: 350 AISLLKEMRARG---LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
A+SL M G + + + R G LD A +M V+ N
Sbjct: 75 AVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQ 134
Query: 407 IICGLCMAKGRMQDVEDLV-DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+I GLC K R D D+V RM G+ D Y+ L+KG C E + +++ M
Sbjct: 135 LIKGLCDGK-RTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTA 193
Query: 466 KKG 468
G
Sbjct: 194 DGG 196
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 173/364 (47%), Gaps = 43/364 (11%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ FHQ ++ + Y ++G L ++N + LA +F Q+V+ +P V TYT ++
Sbjct: 33 ALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKV-TYTVLV 91
Query: 202 RGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
K E ++F+ M K P L+ Y T++NG+CK G +++A M + G
Sbjct: 92 HSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRS 151
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P+ Y+ +I GLC + R +EA+ L +M +D V + S + GLC GK D+A
Sbjct: 152 PSGSLYSTLIDGLCKHDRHEEARELF-EMAAGDVQD-VIVYTSFISGLCKAGKLDEAKAV 209
Query: 319 LRNVMEANMNPDVKSYEVVI-----------------------------------NGFCK 343
++EA PD SY V+I +G CK
Sbjct: 210 HVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCK 269
Query: 344 IGKSDEAISLLKEMRARGLK-PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ +EA +L+ M G + P+V +++AV L + LD A ++L++M + C+P+ V
Sbjct: 270 SRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVV 329
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+Y II C GR+ + +L RM G D Y+ L++GYC V+ + + E
Sbjct: 330 TYTAIIDAFCKV-GRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEE 388
Query: 463 MVTK 466
M +
Sbjct: 389 MAGR 392
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 134/270 (49%), Gaps = 7/270 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ ++ Y G + A+ + K Y++L+ L + + + A E F
Sbjct: 123 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAG 182
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ DV YT+ I G CK G ++ AK V M P+ ++YN +I CK +
Sbjct: 183 D---VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVS 239
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD-NVSTHKSM 302
EAK+ M++ M R C P ++ GLC + RV+EA +++ +M G + +V T+ ++
Sbjct: 240 EAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAV 299
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC + D A L+ + A PDV +Y +I+ FCK+G+ DEA L + M RG
Sbjct: 300 IDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGC 359
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQM 392
V ++N + R ++D AI ++++M
Sbjct: 360 ASDVVAYNILIRGYCRAAKVDEAIAMIEEM 389
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 144/303 (47%), Gaps = 7/303 (2%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGE 241
+K + P + T+ ++IR C++ A ++F M VKP+ Y +I CK +
Sbjct: 5 MKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINK 64
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L+ A +M+ GC P+++TY +++ L + ++ + +M G + T+ +
Sbjct: 65 LDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYAT 124
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C G+ DQA+ +R + +P Y +I+G CK + +EA L EM A G
Sbjct: 125 VVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF-EM-AAG 182
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
V + + L + G+LD A + +M + C P+ VSYN II LC R+ +
Sbjct: 183 DVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLC-KDNRVSEA 241
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVV 481
++L+D+ + + + L+ G C+ VE I M+ R + + + V+
Sbjct: 242 KELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTY-SAVI 300
Query: 482 DAL 484
D L
Sbjct: 301 DGL 303
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 133/294 (45%), Gaps = 28/294 (9%)
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ EM G P +T+ ++I LC ++A + +M K + + ++ LC
Sbjct: 2 LGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCK 61
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+ K D A Y ++++ PD +Y V+++ K K ++ + +EM ++G P + +
Sbjct: 62 INKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVT 121
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ V + G +D+A+ L++++ P+ Y+T+I GLC R ++ +L +
Sbjct: 122 YATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLC-KHDRHEEARELFE-- 178
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV------------------TKKGRL 470
+ +G D +Y+ + G C+ G ++ + +M+ K R+
Sbjct: 179 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238
Query: 471 LKLKNFLTRVVD-----ALLLMWIVTGGSWISRFVFVHQVVVIMERTVEDGKRS 519
+ K + + ++ + + ++ G SR V + VI+ER +E G R+
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSR--RVEEACVILERMLEAGDRA 290
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 1/177 (0%)
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L+ +M+ G + T S+++ LC + ++A+ +++ + PD Y VVI C
Sbjct: 1 LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
KI K D A S ++M G P ++ + L + + ++ + ++M P V
Sbjct: 61 KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+Y T++ G C A GR+ L+ R+ +G + ++YS L+ G C+ E ++
Sbjct: 121 TYATVVNGYCKA-GRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEAREL 176
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 177/374 (47%), Gaps = 39/374 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + +G + A+ + + +YN+LL R + A ++ KE
Sbjct: 215 LVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEG 274
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEA 245
+VP +TY T++ Y ++G I+ A V + MT +P+L YN + G C+ G+++EA
Sbjct: 275 IVPTR-ATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEA 333
Query: 246 KKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
K +EM G P+ +TYN ++ R +A L+ +MR G K ++ TH ++K
Sbjct: 334 FKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVK 393
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC G+ ++A+G L + E + PDV +Y +I+ CK G +A L+ EM GLK
Sbjct: 394 GLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKM 453
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC----------GLCM- 413
F+ N + L + + A LL+ PQ +P+ VSY T++ LC+
Sbjct: 454 DTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLW 513
Query: 414 -----------------------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
G++ + D ++ ++ G D T Y+ ++ YC+E
Sbjct: 514 DEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKE 573
Query: 451 GNVENVMQIAHEMV 464
G++E Q ++MV
Sbjct: 574 GDLEKAFQFHNKMV 587
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 164/341 (48%), Gaps = 4/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ AY G +K A L++YN L L + + A + ++ +
Sbjct: 285 LVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLG 344
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+V PDV TY T++ K +A + + M VK +L+ +N ++ G C++G+LEEA
Sbjct: 345 IVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEA 404
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M G P+ +TYN +I C G V +A +LM +M +G K + T ++L
Sbjct: 405 LGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYN 464
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC ++++A LR + PD SY V+ + K K + A+ L EM R L P+
Sbjct: 465 LCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPS 524
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ ++N + + L G+L AI L ++ +M +P+ +YN II C +G ++
Sbjct: 525 ISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYC-KEGDLEKAFQFH 583
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++M+ + D + L+ G C G +E M++ V K
Sbjct: 584 NKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEK 624
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 163/357 (45%), Gaps = 41/357 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A GNV A + + ++ N+LL L + + AEE +
Sbjct: 426 LIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRG 485
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
VP +VS Y T++ Y K E A ++D M + P++ YNT+I G G+L EA
Sbjct: 486 FVPDEVS-YGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEA 544
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+NE+M G P++ TYN +I+ C G +++A KM N FK +V T +++ G
Sbjct: 545 IDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNG 604
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC+ G+ ++A+ + +E DV +Y +I CK D A+ +M RGL+P
Sbjct: 605 LCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPD 664
Query: 366 VFSFNAVFRILVENGELDRAILLLKQM------------PQMDCLPNFV----------- 402
VF++N + L E G A +L ++ P + V
Sbjct: 665 VFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSD 724
Query: 403 -------------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
SYN I LC+ G++++ + ++D M++ G ++D + Y L++G
Sbjct: 725 IESVGNTQGDDQESYNKYIKELCIG-GQLKEAKAVLDEMMQKGMSVDNSTYITLMEG 780
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 146/321 (45%), Gaps = 10/321 (3%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE-----NAKKV 216
++ L R+ LA + H + V P + ++ + +A
Sbjct: 140 DAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHS 199
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ + PN +N +++ C KG L +A +++M G P+ +TYN ++ C G
Sbjct: 200 LIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGM 259
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA+ L+A+M+ G +T+ +++ +G QA + + PD+ +Y V
Sbjct: 260 LGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNV 319
Query: 337 VINGFCKIGKSDEAISLLKEMRARGL-KPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+ G C+ GK DEA L EM G+ P V ++N + + A+ LL++M +
Sbjct: 320 LAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREK 379
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ V++N I+ GLC +G++++ ++ M G D Y+ L+ C+ GNV
Sbjct: 380 GVKSSLVTHNIIVKGLCR-EGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAK 438
Query: 456 VMQIAHEMVTKKGRLLKLKNF 476
+ EMV + G LK+ F
Sbjct: 439 AFVLMDEMV-RSG--LKMDTF 456
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 142/297 (47%), Gaps = 40/297 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG-MIENAKKVFD 218
SY +++ + + A + +++K + P +STY T+I+G MG + E K+ +
Sbjct: 492 SYGTVMAAYFKEYKPEPALCLWDEMIKRKLTP-SISTYNTLIKGLSTMGKLTEAIDKLNE 550
Query: 219 VMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+M + P+ YN +I+ +CK+G+LE+A + N+M+ +P+ +T N ++ GLC+ GR
Sbjct: 551 LMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGR 610
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+++A L G K +V T+ ++++ LC D A+ + ++ + PDV +Y V
Sbjct: 611 LEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNV 670
Query: 337 VINGFCKIGKSDEAISLLKEMRARG----------LKPTVF------------------- 367
+++ + G+S EA +L ++ G +K +V
Sbjct: 671 LLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGN 730
Query: 368 -------SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
S+N + L G+L A +L +M Q + +Y T++ GL + R
Sbjct: 731 TQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQKR 787
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 44/219 (20%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+I AY G+++ A F FH K +EN + + N+L+ L ++ A + F V
Sbjct: 566 IIHAYCKEGDLEKA-FQFHN-KMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWV- 622
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E DV TY T+I+ CK ++ A + F M V+ P++ YN +++ + G
Sbjct: 623 EKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSV 682
Query: 244 EAKKCMN---------------------EMMNRGCRP---------------NELTYNAM 267
EA+K ++ E + G P ++ +YN
Sbjct: 683 EAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKY 742
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
I LCI G++ EAK ++ +M G + ST+ ++++GL
Sbjct: 743 IKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 195/385 (50%), Gaps = 14/385 (3%)
Query: 90 HTTPCYTAITDVLLSHSLISIAASLLK--NSNKLS--DFFISKLIKAYGDRGNVKAAIFW 145
H+ Y +T L L +A + + S+ +S + + L+ ++ ++G + A
Sbjct: 101 HSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL 160
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
Q+ ++E C NSLL LV+++ ++ A + F + ++ D T+ +IRG C
Sbjct: 161 LLQSFEVE--GCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLC 217
Query: 206 KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPNE 261
+G E A ++ VM+ +P+++ YNT+I GFCK EL +A + ++ + C P+
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+TY +MI G C G++ EA L+ M RL + NV T ++ G G+ A
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV-TFNVLVDGYAKAGEMLTAEEIRG 336
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
++ PDV ++ +I+G+C++G+ + L +EM ARG+ P F+++ + L
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
L +A LL Q+ D +P YN +I G C A G++ + +V+ M + D +
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKA-GKVNEANVIVEEMEKKKCKPDKITF 455
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVT 465
+ L+ G+C +G + + I H+MV
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVA 480
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 143/280 (51%), Gaps = 5/280 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YN+L+ + N + A E F + +V PDV TYT+MI GYCK G + A +
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLL 300
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M + P + +N +++G+ K GE+ A++ +M++ GC P+ +T+ ++I G C
Sbjct: 301 DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV 360
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+V + L +M G N T+ ++ LC + +A L + ++ P Y
Sbjct: 361 GQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMY 420
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
VI+GFCK GK +EA +++EM + KP +F + G + A+ + +M
Sbjct: 421 NPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVA 480
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+ C P+ ++ ++++ C+ K M ++++ R G +
Sbjct: 481 IGCSPDKITVSSLLS--CLLKAGMAKEAYHLNQIARKGQS 518
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 155/325 (47%), Gaps = 4/325 (1%)
Query: 144 FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
FW ++ ++YN L L + LA + F + +K + V P+ ++
Sbjct: 89 FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMF-ECMKSDGVSPNNRLLGFLVSS 147
Query: 204 YCKMGMIENAKKVF-DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
+ + G + A + V+ + N+++N K +E+A K +E + +
Sbjct: 148 FAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK 207
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
T+N +I GLC G+ ++A L+ M G + ++ T+ ++++G C + ++A ++V
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 323 MEANM-NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
++ +PDV +Y +I+G+CK GK EA SLL +M G+ PT +FN + + GE
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+ A + +M C P+ V++ ++I G C G++ L + M G + YS
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV-GQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTK 466
L+ C E + ++ ++ +K
Sbjct: 387 ILINALCNENRLLKARELLGQLASK 411
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 205/465 (44%), Gaps = 56/465 (12%)
Query: 48 QFSLCLGSNIVTKVIYE---QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLS 104
+F + L N V+ V+ + P A FF W+ KY H CY ++ DVL
Sbjct: 109 KFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQK----KYTHNLECYVSLVDVLAL 164
Query: 105 HSLIS----IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACL 158
+ I + + K ++ + LIK++G G V+ ++ + + K ENG L
Sbjct: 165 AKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMK--ENGIEPTL 222
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN L+ LV + AE F ++++ + PDV TY TMI+GYCK G + A +
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLR 281
Query: 219 VMTVK---PNLLAYNTMIN-----------------------------------GFCKKG 240
VM K + + Y TMI G CK+G
Sbjct: 282 VMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEG 341
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L E M+ +G +PN Y +I G G V++A L+ +M GF +V T+
Sbjct: 342 KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYS 401
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ GLC G+ ++A+ Y + + + Y +I+G K G+ DEA L +EM +
Sbjct: 402 VVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEK 461
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD-CLPNFVSYNTIICGLCMAKGRMQ 419
G + +NA+ ++G++D A+ L K+M + + C +Y +I G+ + R +
Sbjct: 462 GCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGM-FKEHRNE 520
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ L D MI G L G C G V +I E+
Sbjct: 521 EALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELA 565
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 153/310 (49%), Gaps = 7/310 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++++ ++G L + + F ++++ P+V+ YT +I GY K G +E+A ++
Sbjct: 328 HAFSLVIGGLCKEGKLNEGYAVFENMIRKGS-KPNVAIYTVLIDGYAKTGSVEDAIRLLH 386
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M P+++ Y+ ++NG CK G +EEA G N + Y+++I GL G
Sbjct: 387 RMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAG 446
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPDVKSY 334
RVDEA+ L +M G + + +++ GK D+A+ + + E + V +Y
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTY 506
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I+G K +++EA+ L M +G+ PT A+ L +G++ RA +L ++
Sbjct: 507 TILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAP 566
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
M + + + +I LC A GR+++ L D + G + + + ++ + G +
Sbjct: 567 MGVILD-AACEDMINTLCKA-GRIKEACKLADGITERGREVPGRIRTVMINALRKVGKAD 624
Query: 455 NVMQIAHEMV 464
M++ H +
Sbjct: 625 LAMKLMHSKI 634
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 104/238 (43%), Gaps = 36/238 (15%)
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y +++ L + VD + + +++R F VS S++K +G ++ + R +
Sbjct: 155 YVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMK 214
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
E + P + +Y ++NG D A + + M + +KP V ++N + + + G+
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQ 274
Query: 384 RAILLLKQMPQMDCLPNFVSYNT-----------------------------------II 408
+A+ L+ M + ++Y T +I
Sbjct: 275 KALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVI 334
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GLC +G++ + + + MIR G + +Y+ L+ GY + G+VE+ +++ H M+ +
Sbjct: 335 GGLC-KEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDE 391
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 184/412 (44%), Gaps = 45/412 (10%)
Query: 95 YTAITDVLLSHSLISIA----ASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y VL++HS +A + + LS F S+ I N H +
Sbjct: 47 YNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDME 106
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ ++++N L +L I LA E F +IVK N PDV TYT +I G CK+
Sbjct: 107 TLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVK-NGRKPDVVTYTIIIHGVCKIKKF 165
Query: 211 ENAKK------------------------------------VFDVMT---VKPNLLAYNT 231
+ A + + DVM VK + L YN
Sbjct: 166 DTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNA 225
Query: 232 MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG 291
+I+GFC+ G +++A+ + M GC P+ +TYN + C +D+AK L+ M +G
Sbjct: 226 LISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSG 285
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
+ +V ++ +LKG+C D+A + N M DV SY +I FCKIG + A
Sbjct: 286 IEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAY 345
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L +EM +G+ P V +F + + G + A LL QM +M P+ + Y TII L
Sbjct: 346 KLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHL 405
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
C + G+++ + M+ G + D ++ L+ G+C+ V M + EM
Sbjct: 406 CKS-GKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEM 456
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 147/340 (43%), Gaps = 56/340 (16%)
Query: 141 AAIFW---FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
A FW H+ +N AC +++ L + LA E ++K V Y
Sbjct: 168 AIQFWRDMIHKGFSPDNKAC----GAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVY 223
Query: 198 TTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+I G+C+ G I+ A+ + M +P+L+ YN +N FC + L++AKK + M
Sbjct: 224 NALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMER 283
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMA-KMRLNGFKDNVSTHKSMLKGLCVVG--- 310
G P+ +YN ++ G+C D+A +LM KM G D VS + +++K C +G
Sbjct: 284 SGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVS-YNTIIKAFCKIGDTT 342
Query: 311 --------------------------------KFDQAVGYLRNVMEANMNPDVKSYEVVI 338
F+ A L + E ++PD Y +I
Sbjct: 343 SAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTII 402
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
+ CK GK + A S+ +M +G+ P V SFNA+ + + A+ L ++M
Sbjct: 403 DHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSY 462
Query: 399 PNFVSYNTIICGL---------CMAKGRMQDVEDLVDRMI 429
P+ V+Y II GL CM G+M D +DR I
Sbjct: 463 PDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAI 502
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 157/343 (45%), Gaps = 10/343 (2%)
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
I Y G + A+ F + Q YN +GVL+ + LA ++ Q+
Sbjct: 16 IAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGF 75
Query: 190 VPPDVSTYTTMIRGYCKM---GMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAK 246
TY+ I G CK+ I+ + + P++ A+N ++ +G ++ A
Sbjct: 76 SLSSF-TYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLAL 134
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ +++ G +P+ +TY +I+G+C + D A M GF + +++ GL
Sbjct: 135 EVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGL 194
Query: 307 CVVGKFDQAVGYLRNVMEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C K D A + +VM++ + Y +I+GFC+ G+ D+A ++ MR G +P
Sbjct: 195 CDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPD 254
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ ++N + LD A LLK M + P+ SYN ++ G+C KG D L+
Sbjct: 255 LVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGIC--KGNCPDKAYLL 312
Query: 426 --DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++M G D Y+ ++K +C+ G+ + ++ EM K
Sbjct: 313 MTNKMWPKGL-CDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQK 354
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 40/292 (13%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT----------------------------------- 221
Y + I GY K G+I+ A +VFD M+
Sbjct: 12 YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ Y+ I G CK + +++M C P+ +N ++ L + GR+D
Sbjct: 72 TRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRID 131
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
A + K+ NG K +V T+ ++ G+C + KFD A+ + R+++ +PD K+ ++
Sbjct: 132 LALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIV 191
Query: 339 NGFCKIGKSDEAISLLKE-MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
G C K D A L+ + M++ +K + +NA+ G +D+A + M + C
Sbjct: 192 VGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGC 251
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
P+ V+YN + C + + D + L+ M RSG D Y+ LLKG C+
Sbjct: 252 EPDLVTYNVFLNYFC-DELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICK 302
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 5/209 (2%)
Query: 136 RGNVKAAIFWFHQAKQIENGAC-LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
+GN + K G C + SYN+++ ++ A + F ++ ++ + PPDV
Sbjct: 302 KGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGI-PPDV 360
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
T+T I+ + G AKK+ D MT + P+ + Y T+I+ CK G++E A +
Sbjct: 361 VTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCD 420
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ +G P+ +++NA+I G C RV EA L +M+ G + T+K ++ GL K
Sbjct: 421 MVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKK 480
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVING 340
A +M+ D + +I G
Sbjct: 481 ISIACMVWGQMMDKGFTLDRAIAQTLIRG 509
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 6/264 (2%)
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
L Y + I G+ K G +++A + +EM CR + YN I L + R D A ++
Sbjct: 10 LIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQ 69
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M GF + T+ + GLC V F L ++ N PD+ ++ + ++ G+
Sbjct: 70 MGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGR 129
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
D A+ + +++ G KP V ++ + + + + D AI + M P+ +
Sbjct: 130 IDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGA 189
Query: 407 IICGLCMAKGRMQDVE-DLVDRMIRSGH-NLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
I+ GLC GR D+ +L+ +++SG L +Y+ L+ G+C G ++ I M
Sbjct: 190 IVVGLC--DGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMR 247
Query: 465 TK--KGRLLKLKNFLTRVVDALLL 486
+ L+ FL D L+L
Sbjct: 248 RNGCEPDLVTYNVFLNYFCDELML 271
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IKA+ G+ +A F + Q + ++ + + S +A++ Q+ E
Sbjct: 331 IIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMT-EM 389
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ PD YTT+I CK G +E A +F M + P+++++N +INGFCK + EA
Sbjct: 390 GLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEA 449
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
EM NRG P+E+TY +I GL ++ A M+ +M GF + + +++++G
Sbjct: 450 MHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 202/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G + + TY+ +I GLC ++D+A L +M NG N
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C + D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +CE+G+V +++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEM 407
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 166/335 (49%), Gaps = 10/335 (2%)
Query: 137 GNVKAAIF---WFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP 191
G VK F W + GA + +Y +L+ R A F +++++ + P
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP 226
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
V YT +IRG C I A+ +F M + PNL YNTM++G+CK +++A +
Sbjct: 227 T-VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
EM+ G PN +T+ +I GLC + A+ + M G N+ + ++ G C
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G +A+ + + + PDV +Y ++I G C + + +EA LL+EM+ +G P +
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + + G +++AI + QM + PN ++++T+I G C A G+M+ L M
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA-GKMEAAMGLYTEM 464
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G D Y+ L+ G+ ++GN + ++ EM
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 167/322 (51%), Gaps = 18/322 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+YN+++ ++ +K A E + +++ + ++P +V T+ +I G CK + +A+K
Sbjct: 263 LYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLP-NVVTFGILIDGLCKTDEMVSARKFL 321
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V PN+ YN +I+G+CK G L EA +E+ P+ TY+ +I GLC
Sbjct: 322 IDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGV 381
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R++EA L+ +M+ GF N T+ +++ G C G ++A+ + E + P++ ++
Sbjct: 382 DRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G+CK GK + A+ L EM +GL P V ++ A+ ++G A L K+M +
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDL-------------VDRMIRSGHNLDFTMYS 441
PN + + +I GLC GR+ D L + + RS + + MY+
Sbjct: 502 AGLHPNVFTLSCLIDGLC-KDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560
Query: 442 CLLKGYCEEGNVENVMQIAHEM 463
L++G C +G + + +M
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDM 582
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 175/353 (49%), Gaps = 8/353 (2%)
Query: 117 NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKL 176
S+K + LI A+ + G V+ A++ +++ + + + N +L LV+
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDT 176
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMI 233
+ + +V P+V TY T+I G C+ G A ++FD M K P ++ Y +I
Sbjct: 177 MWKVYGDMVARGA-SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILI 235
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
G C + + EA+ M N G PN TYN M+ G C V +A L +M +G
Sbjct: 236 RGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLL 295
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
NV T ++ GLC + A +L ++ + P++ Y +I+G+CK G EA+SL
Sbjct: 296 PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
E+ + P VF+++ + + L ++ A LL++M + LPN V+YNT+I G C
Sbjct: 356 HSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC- 414
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+G M+ ++ +M G + +S L+ GYC+ G +E M + EMV K
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 190/377 (50%), Gaps = 19/377 (5%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
Y+AI VL L + A L+++ LI+ + + F+ ++E+
Sbjct: 73 YSAIIHVLTGAKLYAKARCLMRD-----------LIQCLQNSRRSRICCSVFNVLSRLES 121
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
++ N +++ + + L EE K +V+P + ++ G K G +
Sbjct: 122 SK--FTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPA-MQACNMVLDGLVKKGRFDTMW 178
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
KV+ M + PN++ Y T+I+G C++G+ +A + +EM+ + P + Y +I GL
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGL 238
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C R+ EA+ + MR +G N+ T+ +M+ G C + +A+ + ++ + P+V
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNV 298
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
++ ++I+G CK + A L +M + G+ P +F +N + + G L A+ L +
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ + + LP+ +Y+ +I GLC RM++ + L+ M + G + Y+ L+ GYC+EG
Sbjct: 359 IEKHEILPDVFTYSILIKGLC-GVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEG 417
Query: 452 NVENVMQIAHEMVTKKG 468
N+E +++ +M T+KG
Sbjct: 418 NMEKAIEVCSQM-TEKG 433
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 195/434 (44%), Gaps = 61/434 (14%)
Query: 87 KYHHTTPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAA 142
K T YT + L S IS A S+ ++NS L + + + ++ Y +VK A
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282
Query: 143 IFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
+ + + + +G + ++ L+ L + + + A +F + VVP ++ Y +
Sbjct: 283 LELYQE--MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP-NIFVYNCL 339
Query: 201 IRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I GYCK G + A + + + P++ Y+ +I G C +EEA + EM +G
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
PN +TYN +I G C G +++A + ++M G + N+ T +++ G C GK + A+G
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
++ + PDV +Y +I+G K G + EA L KEM+ GL P VF+ + + L
Sbjct: 460 LYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519
Query: 378 ENGELDRAILLLKQMPQMD-------------CLPNFVSYNTIICGLCMAKGR------- 417
++G + AI L D C PN V Y +I GLC GR
Sbjct: 520 KDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLC-TDGRIFKASKF 578
Query: 418 ----------------------------MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
++DV L +++ G + ++Y L KGY E
Sbjct: 579 FSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEE 638
Query: 450 EGNVENVMQIAHEM 463
G +++ ++ + ++
Sbjct: 639 SGYLKSALRCSEDL 652
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 116/250 (46%), Gaps = 17/250 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y GN++ AI Q + + ++++L+ + ++ A + ++V +
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
++P DV YT +I G+ K G + A ++ M + PN+ + +I+G CK G + +A
Sbjct: 469 LLP-DVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527
Query: 246 KKCM-------------NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
K NE+ C PN + Y A+I GLC +GR+ +A + MR +G
Sbjct: 528 IKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGL 587
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ +V T +++G + ++++ + P+ Y V+ G+ + G A+
Sbjct: 588 RPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALR 647
Query: 353 LLKEMRARGL 362
+++ G+
Sbjct: 648 CSEDLSGIGI 657
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 177/338 (52%), Gaps = 3/338 (0%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I A D+G V A ++ + A + +++ ++ + + ++ A +++ +
Sbjct: 200 VIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG 259
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
+P V TY +++G C++ + A+ + + + N++ +NT+I G +G+L EA +
Sbjct: 260 CMP-GVMTYGFLLQGLCRVRQADEARAMLGRVP-ELNVVLFNTVIGGCLAEGKLAEATEL 317
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M +GC+P+ TY+ +++GLC GR+ A L+ +M GF NV T+ +L C
Sbjct: 318 YETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 377
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G +D L + + + + Y +I CK G+ DEA+ L++EMR++G P + S
Sbjct: 378 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 437
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + L N +++ A + + + + + N ++YNTII L + GR QD L M
Sbjct: 438 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL-LRDGRWQDAVRLAKEM 496
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
I G +LD Y+ L+K C++GNV+ + + EM K
Sbjct: 497 ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 534
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 165/306 (53%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N+++G + + A E + + + P D TY+ ++ G CK+G I +A ++ M
Sbjct: 298 FNTVIGGCLAEGKLAEATELYETMGLKGCQP-DAHTYSILMHGLCKLGRIGSAVRLLREM 356
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K PN++ Y +++ FCK G ++ + + EM +G N YN MIY LC +GR+
Sbjct: 357 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 416
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DEA L+ +MR G ++ ++ +++ LC + ++A N++E + + +Y +
Sbjct: 417 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 476
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ + G+ +A+ L KEM G V S+N + + + ++G +DR+++LL++M +
Sbjct: 477 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 536
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN VSYN +I LC + R++D +L +M+ G D Y+ L+ G C+ G + +
Sbjct: 537 KPNNVSYNILISELCKER-RVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 595
Query: 458 QIAHEM 463
+ ++
Sbjct: 596 NLLEKL 601
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 150/309 (48%), Gaps = 40/309 (12%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y+ L+ L ++ I A ++ K+ P +V TYT ++ +CK GM ++ + + +
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAP-NVVTYTIVLHSFCKNGMWDDTRALLE 389
Query: 219 VMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN- 274
M+ K N YN MI CK G ++EA + EM ++GC P+ +YN +IY LC N
Sbjct: 390 EMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 449
Query: 275 ----------------------------------GRVDEAKMLMAKMRLNGFKDNVSTHK 300
GR +A L +M L+G +V ++
Sbjct: 450 QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN 509
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++K +C G D+++ L + E + P+ SY ++I+ CK + +A+ L K+M +
Sbjct: 510 GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 569
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GL P + ++N + L + G + A+ LL+++ + P+ ++YN +I C + + D
Sbjct: 570 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVR-LLDD 628
Query: 421 VEDLVDRMI 429
L++R +
Sbjct: 629 AAMLLNRAM 637
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 5/245 (2%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
V P + C+ G +EA + M GC P+ + Y +I+ LC G V EA
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L+ +M L G +V+T +++G+C +G+ +A + +M P V +Y ++ G
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C++ ++DEA ++L R + V FN V + G+L A L + M C P+
Sbjct: 275 CRVRQADEARAML----GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 330
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
+Y+ ++ GLC GR+ L+ M + G + Y+ +L +C+ G ++ +
Sbjct: 331 HTYSILMHGLCKL-GRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLE 389
Query: 462 EMVTK 466
EM K
Sbjct: 390 EMSAK 394
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
Y R V + P ++ V C++G++DEA++LL+ M G P + V L
Sbjct: 146 YRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALC 205
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G + A LL +M M C + +++ ++ G+C GR+++ LVDRM+ G
Sbjct: 206 DQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMC-GLGRVREAARLVDRMMTKGCMPGV 264
Query: 438 TMYSCLLKGYCE 449
Y LL+G C
Sbjct: 265 MTYGFLLQGLCR 276
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 180/377 (47%), Gaps = 40/377 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+KL+ A I + +++E LY+YN L+ R + I LA +++K
Sbjct: 89 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
P + T ++++ GYC I +A + D M +P+ + + T+I+G +
Sbjct: 149 LG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCING---------------------------- 275
EA ++ M+ RGC+PN +TY ++ GLC G
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 276 -------RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
VD+A L +M G + NV T+ S++ LC G++ A L +++E +N
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P++ ++ +I+ F K GK EA L +M R + P +F++N++ + LD+A +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+ M DC P+ V+YNT+I G C +K R++D +L M G D Y+ L++G
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSK-RVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 449 EEGNVENVMQIAHEMVT 465
+G+ +N ++ +MV+
Sbjct: 447 HDGDCDNAQKVFKQMVS 463
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 140/254 (55%), Gaps = 4/254 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++N+L+ V+ AE+ + ++K ++ PD+ TY +++ G+C ++ AK++F
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI-DPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K P+++ YNT+I GFCK +E+ + EM +RG + +TY +I GL +
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A+ + +M +G ++ T+ +L GLC GK ++A+ + ++ + D+ Y
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G CK GK D+ L + +G+KP V ++N + L L A LLK+M +
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 395 MDCLPNFVSYNTII 408
LPN +YNT+I
Sbjct: 569 DGPLPNSGTYNTLI 582
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L A + ++ E + P++ T+ +I + K G A+K++D
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ P++ YN+++NGFC L++AK+ M+++ C P+ +TYN +I G C + R
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L +M G + T+ ++++GL G D A + ++ + PD+ +Y +
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G C GK ++A+ + M+ +K ++ + + + + G++D L +
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V+YNT+I GLC +K +Q+ L+ +M G + Y+ L++ + +G+
Sbjct: 536 VKPNVVTYNTMISGLC-SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAAS 594
Query: 457 MQIAHEM 463
++ EM
Sbjct: 595 AELIREM 601
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 156/301 (51%), Gaps = 5/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y ++ L + LA +++ + + DV + T+I CK +++A +F
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++PN++ Y+++I+ C G +A + +++M+ + PN +T+NA+I
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+ EA+ L M ++ T+ S++ G C+ + D+A ++ + PDV +Y
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I GFCK + ++ L +EM RGL ++ + + L +G+ D A + KQM
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ ++Y+ ++ GLC G+++ ++ D M +S LD +Y+ +++G C+ G V+
Sbjct: 464 DGVPPDIMTYSILLDGLC-NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 455 N 455
+
Sbjct: 523 D 523
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 157/309 (50%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N LL + ++ + ++ + +V + TY +I +C+ I A + M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG-LYTYNILINCFCRRSQISLALALLGKM 146
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+P+++ ++++NG+C + +A +++M+ G RP+ +T+ +I+GL ++ +
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L+ +M G + N+ T+ ++ GLC G D A+ L + A + DV + +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ CK D+A++L KEM +G++P V +++++ L G A LL M +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN V++N +I + +G+ + E L D MI+ + D Y+ L+ G+C ++
Sbjct: 327 NPNLVTFNALIDAF-VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 458 QIAHEMVTK 466
Q+ MV+K
Sbjct: 386 QMFEFMVSK 394
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 147/297 (49%), Gaps = 19/297 (6%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV----------MTVKPNLLAY 229
F +VK +P + + ++ KM K FDV + + L Y
Sbjct: 72 LFGGMVKSRPLPS-IVEFNKLLSAIAKM-------KKFDVVISLGEKMQRLEIVHGLYTY 123
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +IN FC++ ++ A + +MM G P+ +T ++++ G C R+ +A L+ +M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G++ + T +++ GL + K +AV + +++ P++ +Y VV+NG CK G +D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A++LL +M A ++ V FN + L + +D A+ L K+M PN V+Y+++I
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC + GR D L+ MI N + ++ L+ + +EG ++ +M+ +
Sbjct: 304 CLC-SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 5/231 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + ++ E F ++ +V D TYTT+I+G G +NA+KVF
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+++ Y+ +++G C G+LE+A + + M + + Y MI G+C G+
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+ L + L G K NV T+ +M+ GLC +A L+ + E P+ +Y
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 580
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L++EMR+ + V +L +G LD++ L
Sbjct: 581 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKSFL 630
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L++A M+ P+ + +N ++ + + D L KM+ + T+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ C + A+ L +M+ P + + ++NG+C + +A++L+ +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G +P +F + L + + A+ L+ +M Q C PN V+Y ++ GLC +G
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC-KRGDTDL 243
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+L+++M + D +++ ++ C+ +V++ + + EM TK R
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 174/377 (46%), Gaps = 41/377 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
SK++ N I FH + G LYSYN ++ L R + +A +++K
Sbjct: 14 SKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK 73
Query: 187 ENVVP----------------------------------PDVSTYTTMIRGYCKMGMIEN 212
P PDV Y T+I G CK+G++ +
Sbjct: 74 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 133
Query: 213 AKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
A ++FD M V+ + + YN+++ G C G +A + M +M+ R PN +T+ A+I
Sbjct: 134 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 193
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G+ EA L +M +V T+ S++ GLC+ G+ D+A L ++ P
Sbjct: 194 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 253
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
DV +Y +INGFCK + DE L +EM RGL ++N + + + G D A +
Sbjct: 254 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 313
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+M D PN +Y+ ++ GLCM R++ L + M +S LD T Y+ ++ G C+
Sbjct: 314 SRM---DSRPNIRTYSILLYGLCM-NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 369
Query: 450 EGNVENVMQIAHEMVTK 466
GNVE+ + + K
Sbjct: 370 IGNVEDAWDLFRSLSCK 386
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 136/243 (55%), Gaps = 7/243 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +++ V V+ A + + ++ + V PDV TY ++I G C G ++ AK++ D+
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRR-CVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 245
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ YNT+INGFCK ++E K EM RG + +TYN +I G GR
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 305
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+ + ++M + N+ T+ +L GLC+ + ++A+ N+ ++ + D+ +Y +
Sbjct: 306 PDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 362
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G CKIG ++A L + + +GLKP V S+ + + D++ LL ++M +
Sbjct: 363 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 422
Query: 397 CLP 399
LP
Sbjct: 423 LLP 425
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 181/378 (47%), Gaps = 20/378 (5%)
Query: 88 YHHTTPC--------YTAITDVLLSHSLISIAASLLKNSNKLS---DFF-ISKLIKAYGD 135
+HH C Y + + L S IA S++ K D +S LI +
Sbjct: 33 FHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ 92
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
V AI + +++ + YN+++ ++ + A E F ++ ++ V D
Sbjct: 93 GNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV-RADAV 151
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY +++ G C G +A ++ M ++ PN++ + +I+ F K+G+ EA K EM
Sbjct: 152 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 211
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
R P+ TYN++I GLC++GRVDEAK ++ M G +V T+ +++ G C +
Sbjct: 212 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 271
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D+ R + + + D +Y +I G+ + G+ D A + M +R P + +++ +
Sbjct: 272 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSIL 328
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L N +++A++L + M + + + +YN +I G+C G ++D DL + G
Sbjct: 329 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI-GNVEDAWDLFRSLSCKG 387
Query: 433 HNLDFTMYSCLLKGYCEE 450
D Y+ ++ G+C +
Sbjct: 388 LKPDVVSYTTMISGFCRK 405
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 123/278 (44%), Gaps = 36/278 (12%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ ++ +++ K + + M G + +YN +I LC R A +
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ KM G++ +V T S++ G C + A+ + + E PDV Y +I+G CK
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 344 IGKSDEAISLLKEMRARGLK-----------------------------------PTVFS 368
IG ++A+ L M G++ P V +
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
F AV + V+ G+ A+ L ++M + P+ +YN++I GLCM GR+ + + ++D M
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM-HGRVDEAKQMLDLM 246
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ G D Y+ L+ G+C+ V+ ++ EM +
Sbjct: 247 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 284
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 177/338 (52%), Gaps = 3/338 (0%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I A D+G V A ++ + A + +++ ++ + + ++ A +++ +
Sbjct: 216 VIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG 275
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
+P V TY +++G C++ + A+ + + + N++ +NT+I G +G+L EA +
Sbjct: 276 CMP-GVMTYGFLLQGLCRVRQADEARAMLGRVP-ELNVVLFNTVIGGCLAEGKLAEATEL 333
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M +GC+P+ TY+ +++GLC GR+ A L+ +M GF NV T+ +L C
Sbjct: 334 YETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 393
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G +D L + + + + Y +I CK G+ DEA+ L++EMR++G P + S
Sbjct: 394 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 453
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + L N +++ A + + + + + N ++YNTII L + GR QD L M
Sbjct: 454 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL-LRDGRWQDAVRLAKEM 512
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
I G +LD Y+ L+K C++GNV+ + + EM K
Sbjct: 513 ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 165/306 (53%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N+++G + + A E + + + P D TY+ ++ G CK+G I +A ++ M
Sbjct: 314 FNTVIGGCLAEGKLAEATELYETMGLKGCQP-DAHTYSILMHGLCKLGRIGSAVRLLREM 372
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K PN++ Y +++ FCK G ++ + + EM +G N YN MIY LC +GR+
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DEA L+ +MR G ++ ++ +++ LC + ++A N++E + + +Y +
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ + G+ +A+ L KEM G V S+N + + + ++G +DR+++LL++M +
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN VSYN +I LC + R++D +L +M+ G D Y+ L+ G C+ G + +
Sbjct: 553 KPNNVSYNILISELCKER-RVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 458 QIAHEM 463
+ ++
Sbjct: 612 NLLEKL 617
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 150/309 (48%), Gaps = 40/309 (12%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y+ L+ L ++ I A ++ K+ P +V TYT ++ +CK GM ++ + + +
Sbjct: 347 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAP-NVVTYTIVLHSFCKNGMWDDTRALLE 405
Query: 219 VMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN- 274
M+ K N YN MI CK G ++EA + EM ++GC P+ +YN +IY LC N
Sbjct: 406 EMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 465
Query: 275 ----------------------------------GRVDEAKMLMAKMRLNGFKDNVSTHK 300
GR +A L +M L+G +V ++
Sbjct: 466 QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN 525
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++K +C G D+++ L + E + P+ SY ++I+ CK + +A+ L K+M +
Sbjct: 526 GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 585
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GL P + ++N + L + G + A+ LL+++ + P+ ++YN +I C + + D
Sbjct: 586 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVR-LLDD 644
Query: 421 VEDLVDRMI 429
L++R +
Sbjct: 645 AAMLLNRAM 653
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 37/307 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN +L VL R + A + ++V + VPP T+ R C++
Sbjct: 141 SYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRL------------ 188
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
G +EA + M GC P+ + Y +I+ LC G V E
Sbjct: 189 --------------------GRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTE 228
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L+ +M L G +V+T +++G+C +G+ +A + +M P V +Y ++
Sbjct: 229 AATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQ 288
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G C++ ++DEA ++L R + V FN V + G+L A L + M C P
Sbjct: 289 GLCRVRQADEARAML----GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP 344
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ +Y+ ++ GLC GR+ L+ M + G + Y+ +L +C+ G ++ +
Sbjct: 345 DAHTYSILMHGLCKL-GRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL 403
Query: 460 AHEMVTK 466
EM K
Sbjct: 404 LEEMSAK 410
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSAKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L ++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKAILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEGIEPAR-HTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC GK +A L+ +M+ + P D + +I+ C G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQAAKAEALVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 9/319 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI-RSGHNLDFTMYSCLLK 445
L+++M PN ++Y+T++ GLC A G+M + ++ M+ + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNA-GKMIEARSILKEMMDKYLAPTDNSIFMRLIS 299
Query: 446 GYCEEGNVENVMQIAHEMV 464
C GN++ + M+
Sbjct: 300 SQCNSGNLDAAADVLKAMI 318
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AY++++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 169/323 (52%), Gaps = 8/323 (2%)
Query: 150 KQIE-NGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
KQ E NG L + + L+ + I A F I+K P+ T T+I+G C
Sbjct: 85 KQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANILKRGY-HPNAITLNTLIKGLCF 143
Query: 207 MGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G I+ A D + + + ++Y T+ING CK GE + + + ++ +P+ +
Sbjct: 144 CGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVM 203
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y +I+ LC N + +A L ++M + G NV T+ +++ G C++G +A L +
Sbjct: 204 YTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMK 263
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
N+NPDV ++ ++I+ K GK DEA+SL +EM+ + + P + ++ ++ L +N L+
Sbjct: 264 LKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLE 323
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
RAI L K+M + PN SY ++ LC GR+++ + ++ G++L+ Y+ +
Sbjct: 324 RAIALCKKMKEQGIQPNVYSYTILLDALCKG-GRLENAKQFFQHLLVKGYHLNVRTYNVM 382
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+ G C+ G +VM + +M K
Sbjct: 383 INGLCKAGLFGDVMDLKSKMEGK 405
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 169/344 (49%), Gaps = 12/344 (3%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE 153
C+ +T + + S+ A++LK + ++ LIK G +K A+ FH K +
Sbjct: 105 CFCHLTHITFA---FSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRAL-HFHD-KVVA 159
Query: 154 NGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
G L SY +L+ L + K ++ + + V PD+ YTT+I CK ++
Sbjct: 160 QGFQLDQVSYGTLINGLCKAGETKAVARLLRKL-EGHSVKPDLVMYTTIIHCLCKNKLLG 218
Query: 212 NAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
+A ++ M VK PN+ Y T+I+GFC G L+EA +NEM + P+ T+N +I
Sbjct: 219 DACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILI 278
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
L G++DEA L +M+ N+ T+ S++ GLC ++A+ + + E +
Sbjct: 279 DALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 338
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P+V SY ++++ CK G+ + A + + +G V ++N + L + G + L
Sbjct: 339 PNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 398
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+M C+PN +++ TIIC L + K E + MI G
Sbjct: 399 KSKMEGKGCMPNAITFKTIICAL-LEKDENDKAEKFLREMIARG 441
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 111/209 (53%), Gaps = 6/209 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y +L+ + ++K A +++ +N+ PDV T+ +I K G I+ A +F
Sbjct: 236 VFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNI-NPDVYTFNILIDALAKEGKIDEAMSLF 294
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K PN++ Y ++I+G CK LE A +M +G +PN +Y ++ LC
Sbjct: 295 EEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKG 354
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPDVKS 333
GR++ AK + + G+ NV T+ M+ GLC G F + L++ ME P+ +
Sbjct: 355 GRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMD-LKSKMEGKGCMPNAIT 413
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGL 362
++ +I + ++D+A L+EM ARGL
Sbjct: 414 FKTIICALLEKDENDKAEKFLREMIARGL 442
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 165/312 (52%), Gaps = 6/312 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y SLL L ++ +K A + F ++V PPD Y +I G+ K G + A ++F+
Sbjct: 124 TYGSLLSGLCKMGKLKEAVDLFSRMVYRGC-PPDGVVYNVLIDGFSKKGDMGEAYRLFEE 182
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P + YN++++GF +KGE + +M+ +GC PN T+N ++ G C G
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L +MR G +V ++ ++++G+C GK +A LR ++ + + PD+ SY +
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+ K G D AI L E+ GL+P FS++ + L G++ A ++ K M
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ ++ GLC + R+ + +L M++ Y+ L+ C+ ++V
Sbjct: 363 SAPDAAVVIPLVIGLCRGE-RLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDV 421
Query: 457 MQIAHEMVTKKG 468
+I HE+ T++G
Sbjct: 422 CEIFHEL-TERG 432
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 134/275 (48%), Gaps = 36/275 (13%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN Y ++ C+ EEA+ M +GC PN +Y+ +I GLC +VDEA L
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +M G + NV T+ S+L GLC +GK +AV ++ PD Y V+I+GF K
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF-- 401
G EA L +EM +G PTVF++N++ GE R L K M + C+PN
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229
Query: 402 ---------------------------------VSYNTIICGLCMAKGRMQDVEDLVDRM 428
VSYNT++ G+C +KG+ + + L+ M
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMC-SKGKPHEAQRLLREM 288
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
IRSG D Y+ L+ GY + G +++ +++ +E+
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEI 323
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 154/310 (49%), Gaps = 5/310 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+Y LL L + + A F + + P+V +Y+ +I G C+ ++ A ++ +
Sbjct: 53 YTYGYLLRSLCQAQRFEEARSVFRGMAAQGC-SPNVFSYSILIAGLCRGQKVDEAAELLN 111
Query: 219 VMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M +PN++ Y ++++G CK G+L+EA + M+ RGC P+ + YN +I G G
Sbjct: 112 EMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKG 171
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ EA L +M G V T+ S+L G G+F + ++++ P++ ++
Sbjct: 172 DMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN 231
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++GFCK+G EA L EMR+ G P V S+N + R + G+ A LL++M +
Sbjct: 232 NLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRS 291
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ VSYN +I G + G + L + +SG D YS ++ C G V
Sbjct: 292 GVGPDIVSYNILIDGYSKS-GALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGA 350
Query: 456 VMQIAHEMVT 465
+ +M+
Sbjct: 351 AFVVFKDMIA 360
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 148/320 (46%), Gaps = 40/320 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + +G++ A F + + +++YNSLL R + F ++++
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
VP ++ T+ ++ G+CKMG + A ++F M P++++YNT++ G C KG+ EA
Sbjct: 223 CVP-NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEA 281
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ + EM+ G P+ ++YN +I G +G +D A L ++ +G + + ++ +++
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDC 341
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC GK A ++++ PD ++ G C RG +
Sbjct: 342 LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC-----------------RGER-- 382
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
L E+ EL +A M + +C+P YN ++ LC AK R DV ++
Sbjct: 383 ----------LTESCELFQA------MVKFECVPLIPEYNLLMYKLCKAK-RSDDVCEIF 425
Query: 426 DRMIRSGHNLDFTMYSCLLK 445
+ G + D + +L+
Sbjct: 426 HELTERGFSPDVEISKVILE 445
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ + N SY ++ K G+ D +M G P +++ + R L + +
Sbjct: 10 QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFE 69
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A + + M C PN SY+ +I GLC + ++ + +L++ MI GH + Y L
Sbjct: 70 EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQ-KVDEAAELLNEMIDGGHQPNVVTYGSL 128
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
L G C+ G ++ + + MV +
Sbjct: 129 LSGLCKMGKLKEAVDLFSRMVYR 151
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 180/377 (47%), Gaps = 40/377 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+KL+ A I + +++E LY+YN L+ R + I LA +++K
Sbjct: 51 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 110
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
P + T ++++ GYC I +A + D M +P+ + + T+I+G +
Sbjct: 111 LG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 169
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCING---------------------------- 275
EA ++ M+ RGC+PN +TY ++ GLC G
Sbjct: 170 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 229
Query: 276 -------RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
VD+A L +M G + NV T+ S++ LC G++ A L +++E +N
Sbjct: 230 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 289
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P++ ++ +I+ F K GK EA L +M R + P +F++N++ + LD+A +
Sbjct: 290 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 349
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+ M DC P+ V+YNT+I G C +K R++D +L M G D Y+ L++G
Sbjct: 350 FEFMVSKDCFPDVVTYNTLIKGFCKSK-RVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 408
Query: 449 EEGNVENVMQIAHEMVT 465
+G+ +N ++ +MV+
Sbjct: 409 HDGDCDNAQKVFKQMVS 425
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 140/254 (55%), Gaps = 4/254 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++N+L+ V+ AE+ + ++K ++ PD+ TY +++ G+C ++ AK++F
Sbjct: 292 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI-DPDIFTYNSLVNGFCMHDRLDKAKQMF 350
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K P+++ YNT+I GFCK +E+ + EM +RG + +TY +I GL +
Sbjct: 351 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 410
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A+ + +M +G ++ T+ +L GLC GK ++A+ + ++ + D+ Y
Sbjct: 411 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 470
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G CK GK D+ L + +G+KP V ++N + L L A LLK+M +
Sbjct: 471 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 530
Query: 395 MDCLPNFVSYNTII 408
LPN +YNT+I
Sbjct: 531 DGPLPNSGTYNTLI 544
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L A + ++ E + P++ T+ +I + K G A+K++D
Sbjct: 259 TYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 317
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ P++ YN+++NGFC L++AK+ M+++ C P+ +TYN +I G C + R
Sbjct: 318 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 377
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L +M G + T+ ++++GL G D A + ++ + PD+ +Y +
Sbjct: 378 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 437
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G C GK ++A+ + M+ +K ++ + + + + G++D L +
Sbjct: 438 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 497
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V+YNT+I GLC +K +Q+ L+ +M G + Y+ L++ + +G+
Sbjct: 498 VKPNVVTYNTMISGLC-SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAAS 556
Query: 457 MQIAHEM 463
++ EM
Sbjct: 557 AELIREM 563
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 156/301 (51%), Gaps = 5/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y ++ L + LA +++ + + DV + T+I CK +++A +F
Sbjct: 187 LVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 245
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++PN++ Y+++I+ C G +A + +++M+ + PN +T+NA+I
Sbjct: 246 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 305
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+ EA+ L M ++ T+ S++ G C+ + D+A ++ + PDV +Y
Sbjct: 306 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 365
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I GFCK + ++ L +EM RGL ++ + + L +G+ D A + KQM
Sbjct: 366 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 425
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ ++Y+ ++ GLC G+++ ++ D M +S LD +Y+ +++G C+ G V+
Sbjct: 426 DGVPPDIMTYSILLDGLC-NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 484
Query: 455 N 455
+
Sbjct: 485 D 485
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 157/309 (50%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N LL + ++ + ++ + +V + TY +I +C+ I A + M
Sbjct: 50 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG-LYTYNILINCFCRRSQISLALALLGKM 108
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+P+++ ++++NG+C + +A +++M+ G RP+ +T+ +I+GL ++ +
Sbjct: 109 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 168
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L+ +M G + N+ T+ ++ GLC G D A+ L + A + DV + +
Sbjct: 169 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 228
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ CK D+A++L KEM +G++P V +++++ L G A LL M +
Sbjct: 229 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 288
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN V++N +I + +G+ + E L D MI+ + D Y+ L+ G+C ++
Sbjct: 289 NPNLVTFNALIDAF-VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 347
Query: 458 QIAHEMVTK 466
Q+ MV+K
Sbjct: 348 QMFEFMVSK 356
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 5/231 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + ++ E F ++ +V D TYTT+I+G G +NA+KVF
Sbjct: 364 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQKVFKQ 422
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+++ Y+ +++G C G+LE+A + + M + + Y MI G+C G+
Sbjct: 423 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 482
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+ L + L G K NV T+ +M+ GLC +A L+ + E P+ +Y
Sbjct: 483 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 542
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L++EMR+ + V +L +G LD++ L
Sbjct: 543 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKSFL 592
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L++A M+ P+ + +N ++ + + D L KM+ + T+
Sbjct: 27 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ C + A+ L +M+ P + + ++NG+C + +A++L+ +M
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G +P +F + L + + A+ L+ +M Q C PN V+Y ++ GLC +G
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC-KRGDTDL 205
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+L+++M + D +++ ++ C+ +V++ + + EM TK R
Sbjct: 206 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 167/317 (52%), Gaps = 8/317 (2%)
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE-NVVPPDVSTYTTMIRGYCKMGMIENA 213
G +Y+ N +L R A F Q+ + + V PD TY T++ G+CK + A
Sbjct: 109 GVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEA 168
Query: 214 KKVFDVMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
+ +F+ M +PNL+ Y+ +I+ +CK GE+ E + EM G + + Y+++I
Sbjct: 169 RVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLIS 228
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
C G ++ + L +M NV T+ +++GL G++ +A L+++ + P
Sbjct: 229 AFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRP 288
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
DV +Y V+ +G CK G++ +AI +L M +G +P ++N V L + +D A ++
Sbjct: 289 DVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVV 348
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC--LLKGY 447
+ M + P+ V+YNT++ GLC A G++ + DL ++ ++ +++C L++G
Sbjct: 349 EMMVKKGKKPDAVTYNTLLKGLCGA-GKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGL 407
Query: 448 CEEGNVENVMQIAHEMV 464
C+EG V + +I MV
Sbjct: 408 CKEGRVHDAARIHSSMV 424
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 146/275 (53%), Gaps = 9/275 (3%)
Query: 200 MIRGYCKMGMIENAKKVFDVMT-----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+++G+C+ G + A +F M V P+ + YNT++NGFCK L EA+ + E M
Sbjct: 118 VLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEAR-VLFEAMK 176
Query: 255 RG--CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+G CRPN +TY+ +I C +G V E L+ +M G K +V + S++ C G
Sbjct: 177 KGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDI 236
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+ ++ ++P+V +Y ++ G + G+ EA +LK+M ARG++P V ++ +
Sbjct: 237 ETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVL 296
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L +NG AI +L M Q P ++YN ++ GLC + RM D +V+ M++ G
Sbjct: 297 ADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLC-KEDRMDDAFGVVEMMVKKG 355
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D Y+ LLKG C G + M + ++++K
Sbjct: 356 KKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEK 390
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 170/343 (49%), Gaps = 9/343 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI Y G V + + ++ A ++ Y+SL+ I+ E F ++++
Sbjct: 189 SVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLR 248
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
V P+V TY+ +++G + G A ++ MT V+P+++AY + +G CK G
Sbjct: 249 RK-VSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAG 307
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A K ++ M+ +G P LTYN ++ GLC R+D+A ++ M G K + T+ ++L
Sbjct: 308 DAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLL 367
Query: 304 KGLCVVGKFDQAVGYLRNVMEA--NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
KGLC GK +A+ + ++ ++ PDV + +I G CK G+ +A + M G
Sbjct: 368 KGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMG 427
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+ + ++N + + +L A+ L K + PN ++Y+ +I GLC K +M V
Sbjct: 428 LQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLC--KMQMLSV 485
Query: 422 -EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L +M SG Y+ L+ C E ++E + EM
Sbjct: 486 ARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEM 528
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 153/312 (49%), Gaps = 7/312 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L + + + A +VK+ PD TY T+++G C G I A ++ +
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGK-KPDAVTYNTLLKGLCGAGKIHEAMDLWKL 385
Query: 220 MT-----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ VKP++ N +I G CK+G + +A + + M+ G + N +TYN +I G
Sbjct: 386 LLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAA 445
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
++ EA L +GF N T+ M+ GLC + A G + ++ + P V Y
Sbjct: 446 RKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDY 505
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++ C+ ++A SL +EMR V SFN + ++ G++ A LL +M
Sbjct: 506 NALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFM 565
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
MD +P+ V+++ +I G + + L ++M+ GH ++ LLKGY +G E
Sbjct: 566 MDLVPDAVTFSILINRFSKL-GMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETE 624
Query: 455 NVMQIAHEMVTK 466
++ + H+M K
Sbjct: 625 KIISLLHQMADK 636
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 140/323 (43%), Gaps = 41/323 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+YN+LL L I A + + ++ E V PDV T +I+G CK G + +A ++
Sbjct: 362 TYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHS 421
Query: 219 VMT--------------------------------------VKPNLLAYNTMINGFCKKG 240
M PN + Y+ MING CK
Sbjct: 422 SMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQ 481
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
L A+ +M + G RP + YNA++ LC +++A+ L +MR +V +
Sbjct: 482 MLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFN 541
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ G G A L + ++ PD ++ ++IN F K+G DEA+ L ++M +
Sbjct: 542 IIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSC 601
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G P V F+++ + GE ++ I LL QM D + + +TI+ LC R D
Sbjct: 602 GHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMS-RNLD 660
Query: 421 VEDLVDRMI-RSGHNLDFTMYSC 442
VE ++ + +S H T C
Sbjct: 661 VEKILPKFSQQSEHTSKGTTIKC 683
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 138/306 (45%), Gaps = 16/306 (5%)
Query: 172 NSIKLAEEFFHQIVKEN-VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLL 227
+S+ A FH+ + + PP +T+I K + V+ M V P
Sbjct: 19 HSLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFT 78
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+ + + F A ++ M RG N N ++ G C +G+ D+A L ++M
Sbjct: 79 SLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQM 138
Query: 288 RLN--GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-----NMNPDVKSYEVVING 340
+ N + T+ +++ G C + +A R + EA + P++ +Y V+I+
Sbjct: 139 KRNYDCVVPDCVTYNTLVNGFCKAKRLAEA----RVLFEAMKKGGDCRPNLVTYSVLIDC 194
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
+CK G+ E + LL+EM GLK VF ++++ G+++ L +M + PN
Sbjct: 195 YCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPN 254
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+Y+ ++ GL GR ++ +++ M G D Y+ L G C+ G + +++
Sbjct: 255 VVTYSCLMQGLGRT-GRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVL 313
Query: 461 HEMVTK 466
MV K
Sbjct: 314 DLMVQK 319
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASL---LKNSN-KLSDFF 125
AL + +A +PN + Y+ + + L ++S+A L +K+S + +
Sbjct: 450 EALKLWKYAVESGFSPN-----SMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVID 504
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ L+ + +++ A F + + + + + S+N ++ ++ +K A+E ++
Sbjct: 505 YNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMF 564
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGEL 242
++V PD T++ +I + K+GM++ A +++ M P ++ +++++ G+ KGE
Sbjct: 565 MMDLV-PDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGET 623
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR-VDEAKML 283
E+ +++M ++ + + ++ LC R +D K+L
Sbjct: 624 EKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKIL 665
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 159/303 (52%), Gaps = 5/303 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+L+ L R + E Q+ E+ PD+ Y T+I G CK G E A +
Sbjct: 250 TFNTLIAYLCRNGLFEQVHEALSQM-PEHGCTPDLRMYATIIDGICKDGHHEVANDILSR 308
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KPN++ YNT++ G C EEA+ + EM C +++T+N ++ C NG
Sbjct: 309 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 368
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD L+ +M +G +V T+ +++ G C G D+AV L+N+ P+ SY +
Sbjct: 369 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 428
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
V+ G C+ + +A L+ M +G P +FN + + + G +++AI LLKQM
Sbjct: 429 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG 488
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C P+ +SY+T+I GL A G+ ++ +L++ MI G + +YS + EG + +
Sbjct: 489 CSPDLISYSTVIDGLGKA-GKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKI 547
Query: 457 MQI 459
+Q+
Sbjct: 548 IQM 550
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 188/395 (47%), Gaps = 23/395 (5%)
Query: 81 PNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN--------SNKLSDFFISKLIKA 132
P P PN Y Y I L + LI+ A ++L + + + +
Sbjct: 103 PVP-PNAYT-----YFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRG 156
Query: 133 YGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPP 192
G R V+A + +++G C N ++ + + E ++ P
Sbjct: 157 GGFRSAVRALQVLHAKGCTLDSGNC----NLVVSAICEQGCVDEGVELLRKLPSFGC-EP 211
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D+ +Y +++G C ++ +++ M PN+ +NT+I C+ G E+ + +
Sbjct: 212 DIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEAL 271
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++M GC P+ Y +I G+C +G + A ++++M G K NV + ++LKGLC
Sbjct: 272 SQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSA 331
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
++++A L + + + D ++ ++++ FC+ G D I LL++M G P V ++
Sbjct: 332 ERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITY 391
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
V + G +D A++LLK M C PN +SY ++ GLC A+ R D ++L+ MI
Sbjct: 392 TTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAE-RWVDAQELISHMI 450
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ G + ++ L+ C++G VE +++ +M+
Sbjct: 451 QQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQML 485
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 157/311 (50%), Gaps = 5/311 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN++L L + AE+ ++ +E+ P D T+ ++ +C+ G+++ ++ + M
Sbjct: 321 YNTVLKGLCSAERWEEAEDLLAEMFQEDC-PLDDVTFNILVDFFCQNGLVDRVIELLEQM 379
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
P+++ Y T+INGFCK+G ++EA + M GC+PN ++Y ++ GLC R
Sbjct: 380 LEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERW 439
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A+ L++ M G N T +++ +C G +QA+ L+ ++ +PD+ SY V
Sbjct: 440 VDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 499
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K GK++EA+ LL M +G+ P ++++ L G D+ I + +
Sbjct: 500 IDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATV 559
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ YN +I LC + D M+ +G + + Y+ L++G EG V
Sbjct: 560 RSDAALYNAVISSLC-KRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ 618
Query: 458 QIAHEMVTKKG 468
+ E+ +++
Sbjct: 619 DLLSELCSRRA 629
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 179/394 (45%), Gaps = 46/394 (11%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+S++A+ + +S LI++ G A A + A + +YN+++
Sbjct: 29 VSVSAAATAPLDAGGSGRLSALIRSLCAAGRTADAARALDTAG---DAAGVVAYNAMIAG 85
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---- 223
R + A + VPP+ TY ++R C G+I +A V D M ++
Sbjct: 86 YCRAGQVAAARRLAAAVP----VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAA 141
Query: 224 -PNLLAY---------------------------------NTMINGFCKKGELEEAKKCM 249
P + N +++ C++G ++E + +
Sbjct: 142 TPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELL 201
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++ + GC P+ ++YNA++ GLC+ R D+ + LM +M G NV+T +++ LC
Sbjct: 202 RKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRN 261
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G F+Q L + E PD++ Y +I+G CK G + A +L M + GLKP V +
Sbjct: 262 GLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCY 321
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N V + L + A LL +M Q DC + V++N ++ C G + V +L+++M+
Sbjct: 322 NTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQ-NGLVDRVIELLEQML 380
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G D Y+ ++ G+C+EG V+ + + M
Sbjct: 381 EHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM 414
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 169/313 (53%), Gaps = 11/313 (3%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+++N ++ L + + A EF ++VK+ P+V TYT +I G+CK G E A KV +
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGF-EPNVITYTILIDGFCKQGHFEEASKVVN 431
Query: 219 VMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M+ K N + YN +I CK G++++A + EM ++GC+P+ T+N++IYGLC N
Sbjct: 432 SMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND 491
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKG---LCVVGKFDQAVGYLRNVMEANMNPDVK 332
+++EA L M L G N T+ +++ L ++ + D+ VG +R D
Sbjct: 492 KMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF---RGCPLDNI 548
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y +I CK G +++ + L+++M + P++ S N + G+++ A+ L+ M
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM 608
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
Q P+ V+YN++I GLC GR Q+ +L + + G + D Y+ L+ YC EG
Sbjct: 609 IQRGLTPDIVTYNSLINGLC-KMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 453 VENVMQIAHEMVT 465
+ Q+ + V+
Sbjct: 668 FNDACQLLFKGVS 680
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 163/311 (52%), Gaps = 10/311 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN +L +LV N K+A F+ ++ + P V T+ +++ +C + +++A +
Sbjct: 167 SYNVVLEILVAGNCPKVAPNVFYDMLSRG-ISPTVYTFGVVMKAFCMVNEVDSACSLLRD 225
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT PN + Y +I+ + + EA K + EM GC P+ T+N +I+GLC GR
Sbjct: 226 MTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGR 285
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L +M L F + ++ GLC +GK D+A R ++ NP+ Y
Sbjct: 286 IHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNT 341
Query: 337 VINGFCKIGKSDEAISLL-KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+ING+ G+ +EA LL K M G +P F+FN + L + G L A+ L +M +
Sbjct: 342 LINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK 401
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
PN ++Y +I G C +G ++ +V+ M G +L+ Y+CL+ C++G +++
Sbjct: 402 GFEPNVITYTILIDGFC-KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460
Query: 456 VMQIAHEMVTK 466
+Q+ EM +K
Sbjct: 461 ALQMYGEMSSK 471
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 158/309 (51%), Gaps = 4/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ V + A++ ++ + PD T+ MI G CK G + +A + D M
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K PN++ Y +I+GFCK+G EEA K +N M +G N + YN +I LC +G++
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A + +M G K ++ T S++ GLC K ++A+G R+++ + + +Y +
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ F ++ +A L+ EMR RG ++N + + L + G ++ + L++QM +
Sbjct: 519 IHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEI 578
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ S N +I C G++ D + MI+ G D Y+ L+ G C+ G + +
Sbjct: 579 FPSINSCNILINSFCRT-GKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEAL 637
Query: 458 QIAHEMVTK 466
+ + + K
Sbjct: 638 NLFNGLQAK 646
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 149/311 (47%), Gaps = 10/311 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++ ++ VN + A + K VP + Y +I + + A K+
Sbjct: 200 VYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSI-IYQMLIHALSENNRVNEAMKLL 258
Query: 218 D---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ +M +P++ +N +I+G CK G + EA K + M+ R + L +++GLC
Sbjct: 259 EEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRM 318
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL-RNVMEANMNPDVKS 333
G+VDEA+ +++K+ N + +++ G V G+F++A L +N++ A PD +
Sbjct: 319 GKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFT 374
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+ ++I+G CK G A+ L EM +G +P V ++ + + G + A ++ M
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMS 434
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
N V YN +I LC G++QD + M G D ++ L+ G C+ +
Sbjct: 435 AKGLSLNTVGYNCLIGALC-KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKM 493
Query: 454 ENVMQIAHEMV 464
E + + +M+
Sbjct: 494 EEALGLYRDML 504
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 123/254 (48%), Gaps = 4/254 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A G ++ A+ + + +Y++NSL+ L + + ++ A + ++ E
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEA 245
V+ V TY T+I + ++ +I+ A K+ M + + + YN +I CK G E+
Sbjct: 508 VIANTV-TYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M P+ + N +I C G+V++A + M G ++ T+ S++ G
Sbjct: 567 LGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +G+F +A+ + ++PD +Y +I+ +C G ++A LL + + G P
Sbjct: 627 LCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPN 686
Query: 366 VFSFNAVFRILVEN 379
+++ + V+N
Sbjct: 687 EITWSILINYFVKN 700
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ +R+ I+ A++ ++ + P D TY +I+ CK G E + +
Sbjct: 514 TYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQ 572
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P++ + N +IN FC+ G++ +A + + +M+ RG P+ +TYN++I GLC GR
Sbjct: 573 MFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
EA L ++ G + T+ +++ C G F+ A L + P+ ++ +
Sbjct: 633 FQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSI 692
Query: 337 VINGFCKIGKSDEAISLL 354
+IN F K E ++L
Sbjct: 693 LINYFVKNNSDSEQFTIL 710
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 12/265 (4%)
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM- 287
Y +I+ GE + K + +M + GC E + ++ G +A L+ M
Sbjct: 97 YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+ F+ ++ +L+ L A +++ ++P V ++ VV+ FC + +
Sbjct: 157 GVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEV 216
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
D A SLL++M G P + + L EN ++ A+ LL++M M C P+ ++N +
Sbjct: 217 DSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDV 276
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
I GLC A GR+ + L DRM+ D + L+ G C G V+ +
Sbjct: 277 IHGLCKA-GRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA----------R 325
Query: 468 GRLLKLKNFLTRVVDALLLMWIVTG 492
L K+ N T + + L+ ++V+G
Sbjct: 326 AMLSKIPNPNTVLYNTLINGYVVSG 350
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 189/409 (46%), Gaps = 76/409 (18%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+KA+ +RG K A++ F + +I L S + LLG LV+ ++A F QIV
Sbjct: 162 LMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTG 221
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+V PDV + ++ +C++G ++ A +V + M ++PN++ YN ++NG+ +G+ E
Sbjct: 222 IV-PDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGV 280
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN--------------- 290
++ + M RG N +T ++ G C G++DEA+ L+ ++ +
Sbjct: 281 ERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVD 340
Query: 291 ---------------------GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G K N+ +++KG C +G+ +A +++ N+ P
Sbjct: 341 GYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKP 400
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
D SY +++G+C+ GK +A L +EM G+ PTV ++N V + LV+ G D A+ L
Sbjct: 401 DCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLW 460
Query: 390 KQMPQMDCLPNFVS-----------------------------------YNTIICGLCMA 414
M + PN +S +NT+I GLC
Sbjct: 461 HLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLC-K 519
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G++ + + DRM G + D Y L GYC+ GNV+ QI M
Sbjct: 520 MGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVM 568
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 163/327 (49%), Gaps = 37/327 (11%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
AE+ ++ ++ ++ D Y ++ GYC+MG +E+A ++ D M +K N++ NT+I
Sbjct: 315 AEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLI 374
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
G+CK G++ EA++ M++ +P+ +YN ++ G C G+V +A ML +M +G
Sbjct: 375 KGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGIT 434
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
V T+ +++KGL VG +D A+ ++E + P+ S +++ F K+G SD A+ L
Sbjct: 435 PTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMML 494
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC- 412
KE+ RG + +FN + L + G+L A + +M ++ P+ ++Y T+ G C
Sbjct: 495 WKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCK 554
Query: 413 --------MAKGRMQ-------------------------DVEDLVDRMIRSGHNLDFTM 439
KG M+ DV DL+ M G + +
Sbjct: 555 NGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVT 614
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y L+ G+C+E ++ + EM+ +
Sbjct: 615 YGTLISGWCDEQKLDKAFHLYFEMIER 641
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 160/376 (42%), Gaps = 40/376 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G V A + + +YN+++ LV V S A +H +V+
Sbjct: 408 LLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERG 467
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
V P ++S TM+ + KMG + A ++ + + + +A+NTMI+G CK G+L EA
Sbjct: 468 VTPNEISC-CTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEA 526
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M G P+E+TY + G C NG V EA + M ++ + S++ G
Sbjct: 527 GAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDG 586
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L + K + L + ++P+V +Y +I+G+C K D+A L EM RG P
Sbjct: 587 LFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPN 646
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMD----------------------------- 396
V + + L + + A ++L +M D
Sbjct: 647 VVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLD 706
Query: 397 ------CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
L N + YN I GLC + G++ + ++ ++ G D Y L+
Sbjct: 707 KSDICNSLSNNIVYNIAIDGLCKS-GKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVS 765
Query: 451 GNVENVMQIAHEMVTK 466
GNV+ ++ EM+ K
Sbjct: 766 GNVDEAFKLRDEMLEK 781
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 144/346 (41%), Gaps = 75/346 (21%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+++ L ++ + A F ++ KE + PD TY T+ GYCK G ++ A ++ V
Sbjct: 509 AFNTMISGLCKMGKLMEAGAVFDRM-KELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGV 567
Query: 220 MT--------------------------------------VKPNLLAYNTMINGFCKKGE 241
M + PN++ Y T+I+G+C + +
Sbjct: 568 MERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQK 627
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-------------- 287
L++A EM+ RG PN + + ++ L + R+ EA +++ KM
Sbjct: 628 LDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSD 687
Query: 288 -------RLNGFKDNVSTHKS--------------MLKGLCVVGKFDQAVGYLRNVMEAN 326
L K S KS + GLC GK D+A L +M
Sbjct: 688 KLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRG 747
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
PD +Y +I+ G DEA L EM +GL P + +NA+ L + G +DRA
Sbjct: 748 FLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQ 807
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L ++ Q +PN V+YN +I C G + L ++M G
Sbjct: 808 RLFYKLYQKGLVPNAVTYNILIGCYCRI-GDLDKASRLREKMTEEG 852
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 134/277 (48%), Gaps = 11/277 (3%)
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNE 251
+ +++ + + GM ++A VFD M+ P L + + ++ +KGE A ++
Sbjct: 157 GVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQ 216
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
++ G P+ + ++ C GRVD A ++ KM G + NV T+ ++ G G
Sbjct: 217 IVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGD 276
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
F+ LR + E ++ +V + +++ G+CK GK DEA LL+E+ L +
Sbjct: 277 FEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDEL---LVVDER 333
Query: 372 VFRILVEN----GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
V+ +LV+ G ++ A+ + +M ++ N V NT+I G C G++ + E +
Sbjct: 334 VYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKL-GQVCEAERVFVG 392
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M+ D Y+ LL GYC EG V + EM+
Sbjct: 393 MVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEML 429
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 83/149 (55%)
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
D+ N + YN I+G CK G+L+EA+ ++ +M+RG P+ TY +I+ ++G V
Sbjct: 709 DICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNV 768
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DEA L +M G N++ + +++ GLC +G D+A + + + P+ +Y ++
Sbjct: 769 DEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNIL 828
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTV 366
I +C+IG D+A L ++M G+ +
Sbjct: 829 IGCYCRIGDLDKASRLREKMTEEGISTRI 857
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 163/312 (52%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV- 216
+Y+Y ++ L + A F+ + K+ PD YTTMI G C+MG A+K+
Sbjct: 298 IYTYQEIINGLCKNEECLEAYRVFNDL-KDRGYAPDRVMYTTMIHGLCEMGSFGEARKLW 356
Query: 217 FDVMT--VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
F++M ++PN YNTM++G K G+ E A + NEM N+G +T N +I LC
Sbjct: 357 FEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSR 416
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+ DEA + KM G + + T+ S+++G C GK D+ + L ++ + P V Y
Sbjct: 417 GKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLY 476
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
E++I CK G + A LL +M ++GL P ++++ + +++G+ + L +
Sbjct: 477 ELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCN 536
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ N II LC ++G+ + ++ +M +G D Y+ L++G+C+EG V
Sbjct: 537 KGYGTTTATCNKIISELC-SRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVG 595
Query: 455 NVMQIAHEMVTK 466
M + +E+V +
Sbjct: 596 KSMNLLNELVAQ 607
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 143/294 (48%), Gaps = 12/294 (4%)
Query: 146 FHQAKQIENGACLYSY-------NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
F +A ++ N C Y N ++ L A E F ++ E + D TY
Sbjct: 384 FERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKM-SETGIQADAITYN 442
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
++IRG+CK G ++ + + + + P++ Y +I CK G+ E AK+ + +M ++
Sbjct: 443 SLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSK 502
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G PN TY+ M++G +G + + L + G+ +T ++ LC GK D+A
Sbjct: 503 GLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEA 562
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ + E + D +Y +I GFCK GK ++++LL E+ A+GL+P+ S+ ++
Sbjct: 563 SEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQ 622
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
L +NG+ + A L M P+ +I GLC +GR + D + M+
Sbjct: 623 LCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLC-KQGRATEGMDRLMGML 675
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 138/315 (43%), Gaps = 41/315 (13%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
PD ++ ++ C +G IE A +V+ ++ +++A N++++G K G+ E +
Sbjct: 154 PDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEF 213
Query: 249 MNEMMNRG--CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
EM+ G N T +I C +G+V L+ + G T+ ++ G
Sbjct: 214 YQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGF 273
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK----------------------- 343
C + L ++ N P + +Y+ +ING CK
Sbjct: 274 CQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDR 333
Query: 344 ------------IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+G EA L EM +G++P +++N + +++G+ +RA L +
Sbjct: 334 VMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNE 393
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M V+ N II LC ++G+ + ++ +M +G D Y+ L++G+C+EG
Sbjct: 394 MCNKGYGTTTVTCNKIISELC-SRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEG 452
Query: 452 NVENVMQIAHEMVTK 466
V+ M + +E+V +
Sbjct: 453 KVDERMNLLNELVAQ 467
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 39/290 (13%)
Query: 128 KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
K+I RG A F + + A +YNSL+ + + +++V +
Sbjct: 408 KIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQ 467
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEE 244
+ P VS Y +I CK G E AK++ M+ K PN Y+TM++G K G+ E
Sbjct: 468 DP-QPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEH 526
Query: 245 AKKCMNEMMNRG-----------------------------------CRPNELTYNAMIY 269
++ NE N+G + + +TYN++I
Sbjct: 527 VRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIR 586
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G C G+V ++ L+ ++ G + + S++ S++ LC G + A +++ + P
Sbjct: 587 GFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEP 646
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
E +I+G CK G++ E + L M +KP +F + L+++
Sbjct: 647 HANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECLIQS 696
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 166/338 (49%), Gaps = 31/338 (9%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFH--QIVKENVVP-PDVSTYTTMIRGYCKMGMIENAKKV 216
++NS + L I A F QI +E +P P+V TY M+ G+CK GM+E AK +
Sbjct: 254 TFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTL 313
Query: 217 FDVMTVKPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
D M N + +YN + G + G+L EA + EM+ G P+ +YN ++ GLC
Sbjct: 314 VDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCK 373
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
NG + +A+MLM M NG + T+ ++L G C GK +A L ++ N +P+ +
Sbjct: 374 NGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYT 433
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM- 392
V+++ K G+ EA +LL++M +G + N + L NG+LD+AI ++ M
Sbjct: 434 CNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMW 493
Query: 393 ----------------------PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
C P+ V+Y+TII GLC A GR+ D + M+
Sbjct: 494 THGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKA-GRLDDAKKKFIEMMS 552
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
G D +Y + +C EG + + Q+ +M K+G
Sbjct: 553 KGLQPDSAIYDTFIHSFCREGKISSAFQVLKDM-EKRG 589
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 177/317 (55%), Gaps = 18/317 (5%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++N L+G+L ++ A E F ++ P + T+ ++RGYC+ G+ ++
Sbjct: 148 YTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEF-TFGILVRGYCRAGLASKGLELLG 206
Query: 219 ---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + PN + YNT+I+ FCK+G+ +A+K +++M G P+ T+N+ I LC +G
Sbjct: 207 QMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSG 266
Query: 276 RVDEAKMLMAKMRLN---GFKD-NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN-PD 330
++ EA + M+++ G NV T+K ML G C G ++A L + M+ N N +
Sbjct: 267 KILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEA-KTLVDTMKRNANFIN 325
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
++SY + + G + GK EA +LKEM G++P ++S+N V L +NG L A +L+
Sbjct: 326 LESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMG 385
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC--LLKGYC 448
M + LP+ V+Y+T++ G C +KG++ + +L+ MI +N Y+C LL
Sbjct: 386 LMIRNGILPDTVTYSTLLHGYC-SKGKVFEANNLLHEMI--SNNCSPNTYTCNVLLHSLW 442
Query: 449 EEGNV---ENVMQIAHE 462
+EG + EN++Q +E
Sbjct: 443 KEGRISEAENLLQKMNE 459
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 152/318 (47%), Gaps = 28/318 (8%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+YSYN ++ L + + A +++ N + PD TY+T++ GYC G + A +
Sbjct: 361 IYSYNIVMDGLCKNGMLSDARMLMGLMIR-NGILPDTVTYSTLLHGYCSKGKVFEANNLL 419
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M PN N +++ K+G + EA+ + +M +G + +T N +I LC N
Sbjct: 420 HEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNN 479
Query: 275 GRVDEAKMLMAKMRLNG--------------FKDNVS---------THKSMLKGLCVVGK 311
G++D+A ++ M +G D +S T+ +++ GLC G+
Sbjct: 480 GQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGR 539
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A +M + PD Y+ I+ FC+ GK A +LK+M RG T+ ++N+
Sbjct: 540 LDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNS 599
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L ++ L+ +M + P+ +YN ++ LC GR+ D ++D M++
Sbjct: 600 LILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEG-GRINDAPSVLDEMLQK 658
Query: 432 GHNLDFTMYSCLLKGYCE 449
G + + + + L+K +C+
Sbjct: 659 GISPNISSFRILIKAFCK 676
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 174/402 (43%), Gaps = 33/402 (8%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y + D L + ++S A L+ +N S L+ Y +G V A H+
Sbjct: 364 YNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMI 423
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
Y+ N LL L + I AE Q + E D T +I C G +
Sbjct: 424 SNNCSPNTYTCNVLLHSLWKEGRISEAENLL-QKMNEKGYGVDTVTCNIIINALCNNGQL 482
Query: 211 ENAKKVFDVMTVK--------------------------PNLLAYNTMINGFCKKGELEE 244
+ A ++ + M P+L+ Y+T+I+G CK G L++
Sbjct: 483 DKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDD 542
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
AKK EMM++G +P+ Y+ I+ C G++ A ++ M G + T+ S++
Sbjct: 543 AKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLIL 602
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GL + + G + + E ++PDV +Y ++N C+ G+ ++A S+L EM +G+ P
Sbjct: 603 GLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISP 662
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ SF + + + + +A + ++ C Y T++ + G++ + ++L
Sbjct: 663 NISSFRILIKAFCKACDF-KASHEVFEIALNVCGHKEALY-TLMFNELLVGGKVAEAKEL 720
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + ++ +Y L+ C++ +E + H ++ K
Sbjct: 721 FETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDK 762
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%), Gaps = 5/246 (2%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P++ YN ++ ++ +E +M+ P T+N +I LC +G +++A+
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L KM G + N T +++G C G + + L + + P+ Y +I+ FC
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL---- 398
K GK+ +A L+ +MR GL P V +FN+ L +G++ A + + M + L
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
PN ++Y ++ G C +G +++ + LVD M R+ + ++ Y+ L G G +
Sbjct: 289 PNVITYKLMLMGFC-KEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWI 347
Query: 459 IAHEMV 464
+ EM+
Sbjct: 348 VLKEML 353
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 107 LISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNS 163
I + + L+ + + D FI + G + +A F K +E C L +YNS
Sbjct: 547 FIEMMSKGLQPDSAIYDTFIHSFCR----EGKISSA---FQVLKDMEKRGCNKTLQTYNS 599
Query: 164 LLGVLVRVNSIKLAEEFFHQI--VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
L+ L N I E + I ++E V PDV TY M+ C+ G I +A V D M
Sbjct: 600 LILGLGSKNQIF---ELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEML 656
Query: 221 --TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ PN+ ++ +I FCK + + + + +N C E Y M L + G+V
Sbjct: 657 QKGISPNISSFRILIKAFCKACDFKASHEVFEIALNV-CGHKEALYTLMFNELLVGGKVA 715
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EAK L F +K ++ LC K + A L +++ D S+ VI
Sbjct: 716 EAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVI 775
Query: 339 NGFCKIGKSDEAISLLKEM 357
+GF K+G A L + M
Sbjct: 776 DGFGKMGNKHVADELAERM 794
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 341 FCKIGKSDEAISLLKEMRAR--GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
K G ++AIS K +R+ +P+++ +N + + + ++ L K M
Sbjct: 85 LAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVS 144
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P ++N +I GL G ++D +L D+M G + + L++GYC G ++
Sbjct: 145 PEAYTFNLLI-GLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLE 203
Query: 459 IAHEMVT 465
+ +M T
Sbjct: 204 LLGQMRT 210
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 211/440 (47%), Gaps = 23/440 (5%)
Query: 4 PRRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIY 63
P +LT ++QIP LV I+ ++ + +NP +S L+ FS + +N+V +V+
Sbjct: 31 PLSTLTPLNQIPPLPGLVNEISRILS--DQRNPHHDLETS--LNAFSSEISTNLVEQVLK 86
Query: 64 EQTN-PYHALFFFNWASN-PNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKL 121
N + A FF WA P + H+ Y + ++L + +I L +
Sbjct: 87 RCKNLGFSAHRFFLWAKRIPG-----FEHSEESYHILVNILGTSRQFAILWDFLIEMRES 141
Query: 122 SDFFISKLI-----KAYGDRGNVKA-AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK 175
DF I++ I ++Y R N+ + AI F + + + + LL VL + +K
Sbjct: 142 HDFEINQEIIWLVFRSYS-RANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVK 200
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTM 232
A++FF ++ ++ TY+ ++RG+ +G A+KVFD M + ++LAYN++
Sbjct: 201 CAQQFFDRV--KHKFEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSL 258
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+ CK G ++EA K E+ + G P+ +Y I C + ++ +M+
Sbjct: 259 LEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDL 318
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
NV T+ ++K LC GK + A L +ME ++PD SY ++ C+ + + A
Sbjct: 319 VPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATK 378
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
L+ M P S+N + ++LV G DRA + + M + P+ +Y+ +I GLC
Sbjct: 379 LISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLC 438
Query: 413 MAKGRMQDVEDLVDRMIRSG 432
KG++++ + MI G
Sbjct: 439 KKKGKLEEACRYFETMIDEG 458
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 2/176 (1%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G + +V +L LC A + V + K+Y +++ G+ IG++ EA
Sbjct: 178 GLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRV-KHKFEAKAKTYSILVRGWGDIGEAVEA 236
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+ EMR RG V ++N++ L + G +D A + +++ P+ SY I
Sbjct: 237 RKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRA 296
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
C A + V ++DRM R + Y+C++K C+ G VE+ Q+ HEM+ +
Sbjct: 297 YCEANN-IHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMER 351
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 5/187 (2%)
Query: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL 164
HS+ S+ + + + F + +IK G V+ A H+ + +SYN++
Sbjct: 304 HSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTI 363
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK- 223
L + + A + +VK+N +P D +Y +++ ++G + A ++++ M +
Sbjct: 364 LAYHCEHSEVNRATKLISIMVKDNCLP-DRHSYNMLLKLLVRVGRFDRATEIWESMGERG 422
Query: 224 --PNLLAYNTMINGFCKK-GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
P++ Y+ MI+G CKK G+LEEA + M++ G P T + L G +D
Sbjct: 423 FYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRNRLIGFGLLDHI 482
Query: 281 KMLMAKM 287
++L KM
Sbjct: 483 EILACKM 489
>gi|255660886|gb|ACU25612.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 484
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 217/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++ + G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQXXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN++ + M+
Sbjct: 301 HCKSGNLDAAADVLKAMI 318
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q+ K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQXXKAETLVRQLXKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVBSEKSAYNSLVQSXLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 167/324 (51%), Gaps = 5/324 (1%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V A+ F+ + I + +YNSL+ + K A F ++++ N+ PDV T++
Sbjct: 260 VNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNM-KPDVVTFS 318
Query: 199 TMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
++ CK G++ A VF M ++P+++ Y+++I+G CK +E+ +NEM++R
Sbjct: 319 ILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSR 378
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
RP+ +T++ + C G V EA+ ++ M G + NV T+ S++ G C+ + D+A
Sbjct: 379 NIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEA 438
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
++ PDV SY ++I G+CK + DEA L EM +GL P + +
Sbjct: 439 RKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISG 498
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L + G A L K+M C P+ ++Y+T++ G C G + + L + + +S
Sbjct: 499 LCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFC-KHGHLDEALALFEALKKSQLKP 557
Query: 436 DFTMYSCLLKGYCEEGNVENVMQI 459
+ + LL G C+ G +E+ ++
Sbjct: 558 NHVICKILLGGMCKAGKLEDAKEL 581
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 151/277 (54%), Gaps = 4/277 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ A G V A+ F + QI + +Y+SL+ + + + K + ++++
Sbjct: 318 SILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLS 377
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
N+ PDV T++ + +CK GM+ A+ + ++M ++PN++ YN++++G+C +++
Sbjct: 378 RNI-RPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMD 436
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+K + M+N+GC P+ L+YN +I G C + R+DEAK L +M G N TH +++
Sbjct: 437 EARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLI 496
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GLC G+ A + + PD+ +Y +++GFCK G DEA++L + ++ LK
Sbjct: 497 SGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLK 556
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
P + + + G+L+ A L + + P+
Sbjct: 557 PNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 158/311 (50%), Gaps = 7/311 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
++N+L+ L I A E I+ P V T+T ++ G CK+G A KK
Sbjct: 176 TFNTLINGLCIEGRIVEAMEQLDYIMSRGY-QPTVYTHTMIVNGLCKIGKTSAAIVWMKK 234
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ + + +P +++Y+ +I+ CK + EA M + G P +TYN++IYG+C +G
Sbjct: 235 MVE-LDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSG 293
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ +A +L +M K +V T ++ LC G +A+ +++ M PD+ +Y
Sbjct: 294 QWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYS 353
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+G CK E+ +LL EM +R ++P V +F+ + + G + A ++ M +
Sbjct: 354 SLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIER 413
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
PN V+YN+++ G C+ +M + + D M+ G D Y+ L+KGYC+ ++
Sbjct: 414 GLRPNVVTYNSLMDGYCL-HSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDE 472
Query: 456 VMQIAHEMVTK 466
Q+ EM K
Sbjct: 473 AKQLFDEMSHK 483
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 160/336 (47%), Gaps = 34/336 (10%)
Query: 134 GDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
G N A+ +F+Q + C+ +N LL LVR+
Sbjct: 80 GSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKH-------------------- 119
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y +++ Y KM + V ++ +IN C + + ++
Sbjct: 120 ---YDSVVSIYRKM----------EFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIF 166
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G +P+ +T+N +I GLCI GR+ EA + + G++ V TH ++ GLC +GK
Sbjct: 167 KLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTS 226
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A+ +++ ++E + P+V SY ++I+ CK +EA+ L MR+ G+ PTV ++N++
Sbjct: 227 AAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLI 286
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+ +G+ +A +L K+M + + P+ V+++ ++ LC +G + + + +MI+
Sbjct: 287 YGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC-KEGVVLEALSVFGKMIQIAM 345
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
D YS L+ G C+ + + +EM+++ R
Sbjct: 346 EPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIR 381
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E + P+V TY +++ GYC ++ A+KVFD+M K P++L+YN +I G+CK ++
Sbjct: 412 ERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERID 471
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EAK+ +EM ++G PN +T+ +I GLC GR AK L KM +G ++ T+ ++L
Sbjct: 472 EAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLL 531
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C G D+A+ + ++ + P+ ++++ G CK GK ++A L + L+
Sbjct: 532 SGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQ 591
Query: 364 PTV 366
P V
Sbjct: 592 PDV 594
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 6/239 (2%)
Query: 230 NTMINGFCKKGEL---EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
N + CK G ++A N+M++ P +N ++ L D + K
Sbjct: 70 NFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRK 129
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M G +V T ++ LC + L + + P + ++ +ING C G+
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
EA+ L + +RG +PTV++ + L + G+ AI+ +K+M ++DC P VSY+
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSI 249
Query: 407 IICGLCMAKGRM-QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
II LC K R+ + DL M G + Y+ L+ G C G + + EM+
Sbjct: 250 IIDSLC--KNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEML 306
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 177/345 (51%), Gaps = 13/345 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S + A+ G V+ A+ F Q + +Y L+ + + A +++V+
Sbjct: 303 STFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQ 362
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ V P +V TYT ++ G CK G + A+ VF +M ++ N L Y T+I+G E
Sbjct: 363 QGV-PLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSE 421
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A ++EM ++G + Y A+I+GLC ++DEAK L+ KM G K N + +++
Sbjct: 422 RALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIM 481
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
K +A+ L+ +M++ P++ +Y +++G CK G DEAIS +M GL+
Sbjct: 482 DACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLE 541
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM----AKGRMQ 419
P V ++ A+ L +NG LD+A+LLL +M + +S + ++C M +G +Q
Sbjct: 542 PNVQAYTALVDGLCKNGRLDKAVLLLDEM-----IDKGMSLDNVVCTSLMDGHLKQGNLQ 596
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D L +MI SG LD Y+C + G+C ++ ++ EM+
Sbjct: 597 DAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMI 641
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 149/282 (52%), Gaps = 2/282 (0%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEE 244
V+E VPP+ T ++ + E A ++F+ + PN+ +N MI+ CK+G+L E
Sbjct: 154 VRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA-PNVFTFNIMIDFLCKEGDLAE 212
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A+ + M GC P+ +TYN++I G G ++E + L+ +MR G + +V T+ +++
Sbjct: 213 ARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVN 272
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
C G+ ++A Y + + +V ++ ++ FCK G EA+ L +MR +G+KP
Sbjct: 273 CFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKP 332
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++ + + G LD A++L +M Q N V+Y ++ GLC +G++ + ED+
Sbjct: 333 NEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLC-KEGKVAEAEDV 391
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M R+G + +Y+ L+ G+ N E + + EM K
Sbjct: 392 FRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDK 433
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 122/247 (49%), Gaps = 4/247 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
+K+ + DVS Y +I G C + ++ AK + + M +KPN + Y +++ K +
Sbjct: 430 MKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARK 489
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
EA + +MM+ G RPN +TY A++ GLC G +DEA KM G + NV + +
Sbjct: 490 ESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTA 549
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GLC G+ D+AV L +++ M+ D +++G K G +A +L +M G
Sbjct: 550 LVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSG 609
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+ ++ + + A +L +M + P+ V YN +I C G M++
Sbjct: 610 LQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLI-NKCQKLGNMEEA 668
Query: 422 EDLVDRM 428
L + M
Sbjct: 669 AILQNEM 675
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 166/308 (53%), Gaps = 11/308 (3%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN++L L + AEE ++++ + P +V T+ T IR +C+ G+++ A ++ +
Sbjct: 8 YTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEV-TFATQIRAFCQNGLLDRAVELLE 66
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M P+++ Y+T++NGF + G ++EA K +N M+ CRPN + YNA + GLCI G
Sbjct: 67 QMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAG 123
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R +E L+A+M N +T +++ LC + AV L + + PDV SY
Sbjct: 124 RWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYN 183
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+ F ++D+A+ LLK M KP SFNAV + L + A+ L+ +M +
Sbjct: 184 TIISCFSDQARADDALKLLKSMLC---KPDTISFNAVLKCLCKAKRWYDAVELVAKMLKK 240
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
DC N +++N +I LC G+++D ++ + M + D YS L+ G+ E+G E
Sbjct: 241 DCRINEMTFNILIDSLCQ-NGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEM 299
Query: 456 VMQIAHEM 463
+ M
Sbjct: 300 AFDLFRSM 307
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 182/385 (47%), Gaps = 18/385 (4%)
Query: 86 NKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLS---DFFI-SKLIKAYGDRGNVKA 141
N H + + L+ A LL+ K D I S L+ + + G V
Sbjct: 36 NSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDE 95
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ + N C YN+ L L + E ++V+++ PP+ +T++T+I
Sbjct: 96 ALKLLNTMLCRPNTVC---YNAALKGLCIAGRWEEVGELIAEMVRKDC-PPNDATFSTLI 151
Query: 202 RGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
C+ ++E A +V + M P++++YNT+I+ F + ++A K + M+ C+
Sbjct: 152 NSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CK 208
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P+ +++NA++ LC R +A L+AKM + N T ++ LC G+ A+
Sbjct: 209 PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEV 268
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+ + PD+ +Y +INGF + G + A L + M R +FS+NA + L
Sbjct: 269 FELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCM 325
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
D A L+ M DCLPN V++N +I LC KG + D+ ++M + G D
Sbjct: 326 AARWDDAGELIADMVTEDCLPNEVTFNILISSLCQ-KGLVNRAIDVYEQMPKYGITPDIF 384
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ L+ GY E+G +++ ++ M
Sbjct: 385 TYNALINGYSEQGRLDDALKFLSTM 409
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 158/303 (52%), Gaps = 37/303 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ L + ++ A E Q+ K +P DV +Y T+I + ++A K+
Sbjct: 146 TFSTLINSLCQNRLVEYAVEVLEQMQKYGYMP-DVVSYNTIISCFSDQARADDALKLLKS 204
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M KP+ +++N ++ CK +A + + +M+ + CR NE+T+N +I LC NG+V +
Sbjct: 205 MLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKD 264
Query: 280 AKM---LMAKMR-----------LNGFKD------------------NVSTHKSMLKGLC 307
A LM K R +NGF + ++ ++ + LKGLC
Sbjct: 265 AIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLC 324
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
+ ++D A + +++ + P+ ++ ++I+ C+ G + AI + ++M G+ P +F
Sbjct: 325 MAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIF 384
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++NA+ E G LD A+ L MP C P+ +SYN+I+ GLC A+ R +D E LV
Sbjct: 385 TYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAE-RWKDAEKLVTE 440
Query: 428 MIR 430
M+R
Sbjct: 441 MLR 443
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 145/277 (52%), Gaps = 10/277 (3%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAK 246
V PD TY T+++G C E A+++ M + PN + + T I FC+ G L+ A
Sbjct: 3 VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + +M GC P+ + Y+ ++ G +GRVDEA L+ M + N + + LKGL
Sbjct: 63 ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLC---RPNTVCYNAALKGL 119
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C+ G++++ + ++ + P+ ++ +IN C+ + A+ +L++M+ G P V
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
S+N + + D A+ LLK M C P+ +S+N ++ LC AK R D +LV
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAK-RWYDAVELVA 235
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+M++ ++ ++ L+ C+ G V++ +++ M
Sbjct: 236 KMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELM 272
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 4/219 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ L + +K A E F + K +P D+ TY+++I G+ + G+ E A +F
Sbjct: 248 TFNILIDSLCQNGQVKDAIEVFELMPKYRCMP-DIVTYSSLINGFSEQGLDEMAFDLFRS 306
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M + ++ +YN + G C ++A + + +M+ C PNE+T+N +I LC G V+
Sbjct: 307 MPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNR 366
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A + +M G ++ T+ +++ G G+ D A+ +L + PD SY ++
Sbjct: 367 AIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILK 423
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
G C+ + +A L+ EM + P +F ++ ++
Sbjct: 424 GLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 462
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P +++N V + L + ++A L+++M + C PN V++ T I C G +
Sbjct: 3 VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQ-NGLLDRA 61
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L+++M + G D +YS L+ G+ E G V+ +++ + M+ +
Sbjct: 62 VELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR 106
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 197/407 (48%), Gaps = 65/407 (15%)
Query: 106 SLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL------- 158
+++S++ + K F +S LI Y G + A F AK ++ G CL
Sbjct: 85 TVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVF--AKILKMGLCLNGKVNEA 142
Query: 159 ----------------YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+Y L+ L ++ + A + QI + +V +V Y+T+I
Sbjct: 143 LLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQI-EGKLVNTNVVMYSTIID 201
Query: 203 GYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
G CK ++ +A ++ M VK P ++ ++++I GFC G+ ++A + NEM+ + P
Sbjct: 202 GLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINP 261
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ T+N ++ LC G++ EAK ++A M G + V T+ +++ G C+V + +A L
Sbjct: 262 DAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVL 321
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP--------------- 364
+ + P+ +SY ++INGFCKI DEA+ L EM RG+ P
Sbjct: 322 SIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKA 381
Query: 365 --------------------TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
+ ++N++ + +N +D+AI L+K++ + PN +Y
Sbjct: 382 GRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTY 441
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
N +I GLC G++++ +D+ ++ G+N++ Y+ ++ G C+EG
Sbjct: 442 NILIDGLCKG-GQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEG 487
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 172/345 (49%), Gaps = 9/345 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSDFFI--SKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ I D L L++ A L ++ + S LI + G K A F++
Sbjct: 196 YSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMV 255
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
Y++N L+ L + IK A+ ++KE V P V TY T++ GYC + +
Sbjct: 256 MKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGV-EPTVVTYNTLMDGYCLVNEV 314
Query: 211 ENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
AK V + M V PN +YN MINGFCK ++EA +EM RG P+++TYN++
Sbjct: 315 GKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSL 374
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC GR+ A L+ +M N ++ T+ S++ C D+A+ ++ + E +
Sbjct: 375 IDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGI 434
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P++ +Y ++I+G CK G+ A + +++ +G +++N + L + G D A +
Sbjct: 435 QPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEV 494
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
LL +M +P+ V+Y TII L K + + L+ M+ G
Sbjct: 495 LLSKMEDNGIIPDAVTYETIIQAL-FHKDENEKAQKLLREMVIKG 538
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 158/349 (45%), Gaps = 25/349 (7%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V A+ F++ +QI + +N +L L++ + ++ V PD+ T +
Sbjct: 47 VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 106
Query: 199 TMIRGYCKMGMIENAKKVF---------------DVMTVKPNLLA---------YNTMIN 234
+I YC +G + A VF + + ++LA Y +IN
Sbjct: 107 ILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILIN 166
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
G CK G+ A + + ++ + N + Y+ +I GLC + V +A L ++M +
Sbjct: 167 GLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPP 226
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
V T S++ G C+VGKF A ++ N+NPD ++ ++++ CK GK EA +++
Sbjct: 227 TVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVI 286
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
M G++PTV ++N + E+ +A +L + +M PN SYN +I G C
Sbjct: 287 AVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKI 346
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
K + + L M G Y+ L+ G C+ G + ++ EM
Sbjct: 347 K-MVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM 394
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 118/221 (53%), Gaps = 7/221 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN ++ ++ + A FH++ + P V TY ++I G CK G I A ++ D
Sbjct: 335 SYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKV-TYNSLIDGLCKAGRIPYAWELVDE 393
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + +++ YN++I+ FCK +++A + ++ G +PN TYN +I GLC G+
Sbjct: 394 MHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQ 453
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ A+ + + + G+ N T+ M+ GLC G FD+A L + + + PD +YE
Sbjct: 454 LKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYET 513
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
+I ++++A LL+EM +G+ V++F + R LV
Sbjct: 514 IIQALFHKDENEKAQKLLREMVIKGV--VVYAFE-IRRTLV 551
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 51/244 (20%)
Query: 224 PNLLAYNTMINGFCK-KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P+++ +N ++ K K +M ++G +P+ T + +I C G++ A
Sbjct: 64 PSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFS 123
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
+ AK+ + GLC+ GK ++A+ + +V+ + + +Y ++ING C
Sbjct: 124 VFAKI--------------LKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLC 169
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K+G++ A+ +L+++ + LV N V
Sbjct: 170 KMGQTRAALQVLRQIEGK---------------LVNT--------------------NVV 194
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
Y+TII GLC K + D L MI +S L+ G+C G ++ ++ +E
Sbjct: 195 MYSTIIDGLCKDK-LVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNE 253
Query: 463 MVTK 466
MV K
Sbjct: 254 MVMK 257
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 22/153 (14%)
Query: 319 LRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L ME+ + PD+ + ++IN +C +G+ A S+ ++ GL
Sbjct: 89 LSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGL--------------C 134
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC---MAKGRMQDVEDLVDRMIRSGHN 434
NG+++ A+L + + N V+Y +I GLC + +Q + + +++ N
Sbjct: 135 LNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLV----N 190
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ MYS ++ G C++ V + + EM+ K+
Sbjct: 191 TNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKR 223
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 167/306 (54%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ + + + A + + Q+V + + P D T ++I G+C MG ++ A + M
Sbjct: 213 YNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDF-TCNSLIYGFCIMGQLKEAVGLLHKM 271
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P + ++ +++ FCK+G+++EAK + M + + +TYN+++ G C+ +
Sbjct: 272 ILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEI 331
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
++AK + M G NV ++ +M+ GLC + D+AV + + P+V +Y +
Sbjct: 332 NKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSL 391
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K+GK + L+ EM RG P + ++N++ L +N +D+AI LL +
Sbjct: 392 IDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGI 451
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ +Y +I GLC + G+++D + + + ++ G+NLD Y+ +++G+C +G + +
Sbjct: 452 RPDMYTYTVLIKGLCQS-GKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAAL 510
Query: 458 QIAHEM 463
+ +M
Sbjct: 511 ALLSKM 516
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 186/368 (50%), Gaps = 19/368 (5%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
S+ +LK + + LIK +G++ A+ FH K + G L SY +L+
Sbjct: 126 SVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQAL-NFHD-KVVAQGFHLDQVSYGTLIN 183
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
L +V I A + + V +V P+ Y +I CK ++ +A ++ M K
Sbjct: 184 GLCKVGRITAALQLLKR-VDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRIS 242
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+ N++I GFC G+L+EA +++M+ P T++ ++ C G+V EAKM+
Sbjct: 243 PDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMM 302
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +V T+ S++ G C+V + ++A ++ + +V+SY +ING CK
Sbjct: 303 LGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCK 362
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
I DEA++L +EMR R + P V ++N++ L + G++ + L+ +M PN ++
Sbjct: 363 IKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIIT 422
Query: 404 YNTIICGLCMAKGRMQD-----VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
YN+I+ LC K D + +L D+ IR D Y+ L+KG C+ G +E+ +
Sbjct: 423 YNSILDALC--KNHHVDKAIALLTNLKDQGIRP----DMYTYTVLIKGLCQSGKLEDAQK 476
Query: 459 IAHEMVTK 466
+ +++ K
Sbjct: 477 VFEDLLVK 484
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 146/272 (53%), Gaps = 4/272 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ S L+ A+ G VK A + + + +YNSL+ V I A++ F
Sbjct: 281 YTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDS 340
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+ V+ +V +YTTMI G CK+ M++ A +F+ M + PN++ YN++I+G K G
Sbjct: 341 MASRGVIA-NVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLG 399
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++ K ++EM +RG PN +TYN+++ LC N VD+A L+ ++ G + ++ T+
Sbjct: 400 KISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYT 459
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++KGLC GK + A +++ N DV +Y V+I GFC G D A++LL +M
Sbjct: 460 VLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDN 519
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
G P ++ V L E E D A LL++M
Sbjct: 520 GCIPNAKTYEIVILSLFEKDENDMAEKLLREM 551
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 157/314 (50%), Gaps = 5/314 (1%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
DF + LI + G +K A+ H+ +Y+++ L+ + +K A+
Sbjct: 244 DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCK 238
+K++++ DV TY +++ GYC + I AK +FD M V N+ +Y TMING CK
Sbjct: 304 GVTMKKDIIL-DVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCK 362
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
++EA EM R PN +TYN++I GL G++ L+ +M G N+ T
Sbjct: 363 IKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIIT 422
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ S+L LC D+A+ L N+ + + PD+ +Y V+I G C+ GK ++A + +++
Sbjct: 423 YNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLL 482
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+G V+++ + + G D A+ LL +M C+PN +Y +I L K
Sbjct: 483 VKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSL-FEKDEN 541
Query: 419 QDVEDLVDRMIRSG 432
E L+ MI G
Sbjct: 542 DMAEKLLREMIARG 555
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 4/172 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G G + + + + +YNS+L L + + + A + K+
Sbjct: 391 LIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNL-KDQ 449
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEA 245
+ PD+ TYT +I+G C+ G +E+A+KVF+ + VK ++ Y MI GFC KG + A
Sbjct: 450 GIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAA 509
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+++M + GC PN TY +I L D A+ L+ +M G D S
Sbjct: 510 LALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEKS 561
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 167/307 (54%), Gaps = 6/307 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+++++ L + I A + ++ V P+V TY ++ G+C ++ A KVFD M
Sbjct: 282 FSTVVDALCKEGKITEAHDVVDMMIIRGV-EPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
PN+++YNT+ING+CK +++A EM + PN +TYN +++ C GR+
Sbjct: 341 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRL 399
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A L +M +G +++T++ +L LC D+A+ L+ + +NM+PD++ Y +V
Sbjct: 400 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 459
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G C+ G+ + A + + ++GL+P V ++ + L G LD A L +M C
Sbjct: 460 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 519
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ +YNTI GL K ++ ++ L+ M+ G + D + + L++ C++ ++V
Sbjct: 520 SPDGCTYNTITQGLLQNKEALRAIQ-LLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVK 578
Query: 458 QIAHEMV 464
QI E V
Sbjct: 579 QILSEFV 585
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 163/322 (50%), Gaps = 7/322 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ N L+ +N + A +I+K PD +T+TT+IRG C G I +A +F
Sbjct: 104 VYTLNILINSFCHLNRLGFAFSVLAKILKLGH-QPDTATFTTLIRGLCVEGKIGDALHLF 162
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +PN++ Y T+ING CK G A + + M C+P+ + Y ++I LC +
Sbjct: 163 DKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKD 222
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+V EA L +KM G ++ T+ S++ LC + ++ L ++ + + PDV +
Sbjct: 223 RQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIF 282
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V++ CK GK EA ++ M RG++P V ++NA+ E+D A+ + M
Sbjct: 283 STVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 342
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN +SYNT+I G C + RM L + M + + Y+ L+ C G ++
Sbjct: 343 NGYAPNVISYNTLINGYCKIQ-RMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQ 400
Query: 455 NVMQIAHEMVTKKGRLLKLKNF 476
+ + + HEMV G++ L +
Sbjct: 401 DAIALFHEMVA-HGQIPDLATY 421
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 172/341 (50%), Gaps = 12/341 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI GN AAI + +E G C + Y S++ L + + A F ++V
Sbjct: 180 LINGLCKVGNTNAAIRLL---RSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 236
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ + PD+ TYT++I C + ++ + + M + P+++ ++T+++ CK+G++
Sbjct: 237 GQG-ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKI 295
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA ++ M+ RG PN +TYNA++ G C+ +DEA + M NG+ NV ++ ++
Sbjct: 296 TEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTL 355
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G C + + D+A + + + P+ +Y +++ C +G+ +AI+L EM A G
Sbjct: 356 INGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQ 414
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P + ++ + L + LD A+ LLK + + P+ Y +I G+C A G ++
Sbjct: 415 IPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA-GELEAAR 473
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D+ + G + Y+ ++ G C G ++ ++ EM
Sbjct: 474 DIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 514
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
D + P++ N +IN FC L A + +++ G +P+ T+ +I GLC+ G++
Sbjct: 96 DSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKI 155
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A L KM GF+ NV T+ +++ GLC VG + A+ LR++ + N PDV Y +
Sbjct: 156 GDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSI 215
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ CK + EA +L +M +G+ P +F++ ++ L E LL QM
Sbjct: 216 IDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKI 275
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ V ++T++ LC +G++ + D+VD MI G + Y+ L+ G+C + ++ +
Sbjct: 276 MPDVVIFSTVVDALC-KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 334
Query: 458 QIAHEMV 464
++ MV
Sbjct: 335 KVFDTMV 341
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 113/243 (46%), Gaps = 3/243 (1%)
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L++A N M++ P+ + +N ++ + + L +M G +V T
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ C + + A L +++ PD ++ +I G C GK +A+ L +M G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+P V ++ + L + G + AI LL+ M Q +C P+ V Y +II LC + ++ +
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDR-QVTEA 228
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVV 481
+L +M+ G + D Y+ L+ C ++V + ++M+ K ++ + VV
Sbjct: 229 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK--IMPDVVIFSTVV 286
Query: 482 DAL 484
DAL
Sbjct: 287 DAL 289
>gi|255660888|gb|ACU25613.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 481
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 216/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++ + G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQXXKAETLVRQLXKLGVQ-DXTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q+ K V D + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQXXKAETLVRQLXKLGV--QDXTALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
M V AYN+++ + KK E +AK ++ M+ P+ + +++
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVM 480
>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 481
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 216/431 (50%), Gaps = 31/431 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL- 115
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHGAKKSEHALQFFRWVZRSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 116 ---KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
K + + +I +YG G V+ ++ FH+ +++ + SY+ L V++R
Sbjct: 70 DMPKKGLQWDEDLWVLMIDSYGKAGIVQESVKLFHKMEELGVERTIKSYDVLFKVILRRG 129
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAY 229
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++ Y
Sbjct: 130 RYMMAKRYFNKMLSEG-IEPTRHTFNIMIWGFFLSGKVETAXRFFEDMKSRDITPDVITY 188
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
NTMING+ + ++EEA+K EM R P +T+ +I G RVD+A L+ +M+
Sbjct: 189 NTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIKGYVAVDRVDDALRLVEEMKG 248
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKSD 348
G K N T+ + L GLC K +A L+ +++ + P D + +I+G CK G D
Sbjct: 249 FGIKPNAITYSTXLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLD 308
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENG----ELDRAILLLKQMPQMDCL--PNFV 402
A +LK M ++ +V + + +L+EN + D+AI LL ++ + D + P
Sbjct: 309 AAADVLKAM----IRLSVPTEAGHYGVLIENYCKAVQYDKAISLLDKLIEKDIILRPQST 364
Query: 403 S------YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
S YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 365 SHMEPSAYNPLIEYLC-NNGQTAKAETLVRQLMKLGVQ-DATALNTLIRGHSQEGSPDSA 422
Query: 457 MQIAHEMVTKK 467
++ M+ +K
Sbjct: 423 FELLKIMLRRK 433
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ L AE Q++K V D + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPLIEYLCNNGQTAKAETLVRQLMKLGV--QDATALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
M + AYN+++ + KK E +AK ++ M+ G P+
Sbjct: 429 MLRRKXDSEKSAYNSLVQCYLKKSEPADAKTALDSMIENGHLPD 472
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 160/318 (50%), Gaps = 9/318 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK---MGMIENAK 214
L ++N + L + + AE+ I K P++ TY T+I G+CK G + A
Sbjct: 200 LTTFNIFINGLCKAGKLNKAEDVIEDI-KAWGFSPNIVTYNTLIDGHCKKGSAGKMYRAD 258
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+ M PN + +NT+I+GFCK + AK EM +G +PN +TYN++I GL
Sbjct: 259 AILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGL 318
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
NG++DEA L KM G K N+ T +++ G C +A ++ E ++ P+
Sbjct: 319 SNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNA 378
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
++ +I+ FCK G +E +L M G+ P V ++N + L N + A LL +
Sbjct: 379 ITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNE 438
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + + V+YN +I G C G E L+ M+ G + Y+ L+ GYC EG
Sbjct: 439 MENYELKADVVTYNILIGGWC-KDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEG 497
Query: 452 NVENVMQIAHEMVTKKGR 469
N++ +++ +M K+G+
Sbjct: 498 NLKAALKVRTQM-EKEGK 514
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 156/300 (52%), Gaps = 5/300 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+L+ + ++ A+ F ++ ++ + P++ TY ++I G G ++ A ++D
Sbjct: 275 TFNTLIDGFCKDENVLAAKNAFEEMQRQGL-KPNIVTYNSLINGLSNNGKLDEAIALWDK 333
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KPN++ +N +INGFCKK ++EA+K +++ + PN +T+N MI C G
Sbjct: 334 MVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGM 393
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++E L M G NVST+ ++ GLC A L + + DV +Y +
Sbjct: 394 MEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNI 453
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G+CK G+ +A LL EM G+KP ++N + G L A+ + QM +
Sbjct: 454 LIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEG 513
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
N V+YN +I G C G+++D L++ M+ G N + T Y + E+G + ++
Sbjct: 514 KRANVVTYNVLIKGFCKT-GKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDI 572
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 124/245 (50%), Gaps = 4/245 (1%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN---GRVD 278
++PNL +N ING CK G+L +A+ + ++ G PN +TYN +I G C G++
Sbjct: 196 IQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMY 255
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
A ++ +M N N T +++ G C A + + P++ +Y +I
Sbjct: 256 RADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLI 315
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG GK DEAI+L +M GLKP + +FNA+ + + A L + + D +
Sbjct: 316 NGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLV 375
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
PN +++NT+I C A G M++ L + M+ G + + Y+CL+ G C NV +
Sbjct: 376 PNAITFNTMIDAFCKA-GMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKK 434
Query: 459 IAHEM 463
+ +EM
Sbjct: 435 LLNEM 439
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 91/167 (54%), Gaps = 6/167 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+YN L+ L R +++ A++ +++ EN + DV TY +I G+CK G A+K+
Sbjct: 415 TYNCLIAGLCRNQNVRAAKKLLNEM--ENYELKADVVTYNILIGGWCKDGEPSKAEKLLG 472
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M VKPN + YNT+++G+C +G L+ A K +M G R N +TYN +I G C G
Sbjct: 473 EMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTG 532
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
++++A L+ +M G N +T+ + + G G+L N+
Sbjct: 533 KLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEGHLYNI 579
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
NV+AA ++ + E A + +YN L+G + AE+ +++ V P V TY
Sbjct: 428 NVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHV-TY 486
Query: 198 TTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T++ GYC G ++ A KV M + N++ YN +I GFCK G+LE+A + +NEM+
Sbjct: 487 NTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLE 546
Query: 255 RGCRPNELTYNAM 267
+G PN TY+ +
Sbjct: 547 KGLNPNRTTYDVV 559
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 158/309 (51%), Gaps = 5/309 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++N +L L + + A + F + N D+ TYT ++ K I++A +
Sbjct: 130 LKTHNLVLHGLCKSGKVLAAMDHF-ETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALM 188
Query: 218 DVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ +T P + YN ++NG CK G LEEA + ++++ GC P+ +TY ++I GL
Sbjct: 189 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 248
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R EA L +M L G + + ++++GL GK QA + + PDV +
Sbjct: 249 KRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 308
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G CK G+ A+ + K M ARGL P ++A+ L + ++D A+ +L QM +
Sbjct: 309 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 368
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ ++YN +I GLC + G ++ D M+ +G D Y+ L+ G+C+ GN +
Sbjct: 369 AFCTPDTITYNILIDGLCKS-GDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTD 427
Query: 455 NVMQIAHEM 463
+ +M
Sbjct: 428 AACGVFDDM 436
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 160/339 (47%), Gaps = 18/339 (5%)
Query: 141 AAIFWFHQAKQIENGACLY-------------SYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
A + W + K+I++ L +YN+LL L ++ ++ A + +IV +
Sbjct: 170 AIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV-D 228
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEE 244
N PDV TYT++I G K A K+F M ++ + + Y +I G + G++ +
Sbjct: 229 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQ 288
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A M ++GC P+ +T + MI GLC GR+ A + M G N + +++
Sbjct: 289 ASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 348
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC K D A+ L + +A PD +Y ++I+G CK G + A + EM G KP
Sbjct: 349 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 408
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
V+++N + + G D A + M C PN V+Y T+I GLC + ++
Sbjct: 409 DVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRR-QLTKASLY 467
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M G D +YS L+ G C+ G +E + EM
Sbjct: 468 FQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM 506
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 175/347 (50%), Gaps = 13/347 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YTAI D L + I A +L++ N + + L+ G ++ AI K
Sbjct: 168 YTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR--K 225
Query: 151 QIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
++NG + +Y SL+ L + A + F ++ +V D YT +IRG + G
Sbjct: 226 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVL-DTVCYTALIRGLLQAG 284
Query: 209 MIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
I A V+ MT + P+++ +TMI+G CK G + A + M RG PNE+ Y+
Sbjct: 285 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYS 344
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
A+I+GLC ++D A ++A+M+ + T+ ++ GLC G + A + ++EA
Sbjct: 345 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 404
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
PDV +Y ++++GFCK G +D A + +M + P V ++ + L + +L +A
Sbjct: 405 GCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKA 464
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L + M + C P+ Y++++ GLC + G+++ L D M RSG
Sbjct: 465 SLYFQHMKERGCPPDSFVYSSLVDGLCKS-GKLEGGCMLFDEMERSG 510
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 157/310 (50%), Gaps = 6/310 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++ N+LL V R + A + +P DV T+ +I GYC E A V
Sbjct: 59 VHTGNALLDVFARTKRHREAGNLLKNELATTFLP-DVETWNVLITGYCLAREPEEAFAVI 117
Query: 218 DVMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
M V P+L +N +++G CK G++ A GC + TY A++ L
Sbjct: 118 REMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAK 177
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
N ++ +A LM K+ NG ++T+ ++L GLC +G+ ++A+ LR +++ PDV +
Sbjct: 178 NKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 237
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I+G K +S EA L KEM RGL + A+ R L++ G++ +A + K M
Sbjct: 238 YTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMT 297
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
C+P+ V+ +T+I GLC A GR+ + M G + +YS L+ G C+ +
Sbjct: 298 SQGCVPDVVTLSTMIDGLCKA-GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 356
Query: 454 ENVMQIAHEM 463
+ +++ +M
Sbjct: 357 DCALEMLAQM 366
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 149/301 (49%), Gaps = 14/301 (4%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLKNSNK---LSDFF-ISKLIKAYGDRGNVKAA--IFW 145
T CYTA+ LL I A+S+ K + D +S +I G + AA IF
Sbjct: 270 TVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFK 329
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+A+ + +YS +L+ L + + A E Q+ K+ PD TY +I G C
Sbjct: 330 SMEARGLAPNEVVYS--ALIHGLCKARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLC 386
Query: 206 KMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
K G +E A+ FD M KP++ YN +++GFCK G + A ++M + C PN +
Sbjct: 387 KSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVV 446
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
TY +I GLC ++ +A + M+ G + + S++ GLC GK + L +
Sbjct: 447 TYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGC-MLFDE 505
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
ME + + ++ +I CK + DEA+SL +R G+ P +++N++ L+++ ++
Sbjct: 506 MERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISTLIKSAKV 564
Query: 383 D 383
+
Sbjct: 565 N 565
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 41/289 (14%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ L++ I A + + + VP DV T +TMI G CK G I A ++F M
Sbjct: 273 YTALIRGLLQAGKIPQASSVYKTMTSQGCVP-DVVTLSTMIDGLCKAGRIGAAVRIFKSM 331
Query: 221 TVK--------------------------------------PNLLAYNTMINGFCKKGEL 242
+ P+ + YN +I+G CK G++
Sbjct: 332 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 391
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E A+ +EM+ GC+P+ TYN ++ G C G D A + M + NV T+ ++
Sbjct: 392 EAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTL 451
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC + +A Y +++ E PD Y +++G CK GK + L EM G+
Sbjct: 452 ISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 511
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+ +F + N +D A+ L + + + +P+ +YN+II L
Sbjct: 512 ANSQTRTRLIFHLCKAN-RVDEAVSLFNAI-RKEGMPHPYAYNSIISTL 558
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 99/205 (48%), Gaps = 2/205 (0%)
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
T NA++ R EA L+ F +V T ++ G C+ + ++A +R +
Sbjct: 61 TGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREM 120
Query: 323 MEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
E + P +K++ +V++G CK GK A+ + G + ++ A+ L +N +
Sbjct: 121 EEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKK 180
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+ A+ L++++ C P +YN ++ GLC GR+++ DL+ +++ +G D Y+
Sbjct: 181 IQDAVALMEKITANGCTPTIATYNALLNGLC-KMGRLEEAIDLLRKIVDNGCTPDVVTYT 239
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTK 466
L+ G +E ++ EM +
Sbjct: 240 SLIDGLGKEKRSFEAYKLFKEMALR 264
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 176/348 (50%), Gaps = 40/348 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YNS+L L R A E F ++ + V PDV ++T +I G+C++G IE A K++
Sbjct: 165 IVTYNSVLKGLCRSGMWDKAWEVFKEM-DDFGVAPDVRSFTILIGGFCRVGEIEEALKIY 223
Query: 218 DVMT---VKPNLLA-----------------------------------YNTMINGFCKK 239
M +KP+L++ Y +I GFC+
Sbjct: 224 KEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRA 283
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G + +A + +EM+ GC P+ +TYN ++ GLC R+ +A+ L+ +MR G ++ T
Sbjct: 284 GLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTF 343
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C+ GK D+A+ ++ + PD+ +Y +I+G C+ G D+A L +M +
Sbjct: 344 TTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 403
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
R + P +++ + E G+++ A L +M LPN ++YN+II G C + G +
Sbjct: 404 REIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS-GNVS 462
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ + +M+ + + D Y+ L+ GY +E + + ++ + M +K
Sbjct: 463 KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 157/310 (50%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
++N ++ R + A +V + + P + TY ++++G C+ GM + A +VF
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGL-KPGIVTYNSVLKGLCRSGMWDKAWEVFKE 190
Query: 218 -DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
D V P++ ++ +I GFC+ GE+EEA K EM +RG +P+ ++++ +I G+
Sbjct: 191 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 250
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A + +MR G + + ++ G C G A+ ++ PDV +Y
Sbjct: 251 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 310
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++NG CK + +A LL EMR RG+ P + +F + G+LD+A+ L M
Sbjct: 311 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 370
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+YNT+I G+C +G + DL D M + YS L+ +CE+G VE+
Sbjct: 371 LRPDIVTYNTLIDGMC-RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 429
Query: 457 MQIAHEMVTK 466
EM+ K
Sbjct: 430 FGFLDEMINK 439
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 142/280 (50%), Gaps = 36/280 (12%)
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N N M++ +CK E ++ ++EM R P+ +T+N M+ G + A L+
Sbjct: 94 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G K + T+ S+LKGLC G +D+A + + + + PDV+S+ ++I GFC++
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM------PQ---- 394
G+ +EA+ + KEMR RG+KP + SF+ + + G++D A+ L++M P
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273
Query: 395 -------------------------MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
CLP+ V+YNT++ GLC + R+ D E L++ M
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER-RLLDAEGLLNEMR 332
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
G D ++ L+ GYC EG ++ +Q+ M+ ++ R
Sbjct: 333 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 372
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 171/347 (49%), Gaps = 11/347 (3%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAK---QIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
S LI + RG + A+ + + + + +G Y ++G R + A
Sbjct: 238 FSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI---YTMVIGGFCRAGLMSDALRVRD 294
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
++V +P DV TY T++ G CK + +A+ + + M V P+L + T+I+G+C +
Sbjct: 295 EMVGCGCLP-DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIE 353
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G+L++A + + M+N+ RP+ +TYN +I G+C G +D+A L M N T+
Sbjct: 354 GKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTY 413
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ C G+ + A G+L ++ + P++ +Y +I G+C+ G + L++M
Sbjct: 414 SILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV 473
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+ P + ++N + ++ ++ A LL M + P+ V+YN +I G + G +Q
Sbjct: 474 NKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSV-HGNVQ 532
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + ++M G D Y ++ G+ GN + Q+ EM+ +
Sbjct: 533 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 579
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 123/271 (45%), Gaps = 10/271 (3%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ LI Y G + A+ F + +YN+L+ + R + A + + +
Sbjct: 343 FTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH 402
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
+ P V TY+ +I +C+ G +E+A D M K PN++ YN++I G+C+ G +
Sbjct: 403 SREIFPNHV-TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 461
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ +K + +MM P+ +TYN +I+G ++ +A L+ M + +V T+ +
Sbjct: 462 SKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 521
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G V G +A + + PD +Y +ING G S EA L EM RG
Sbjct: 522 INGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGK 581
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+ + F + + E LKQMP
Sbjct: 582 EKRRAAGTVQFVNIQNSAE------SLKQMP 606
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 163/312 (52%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YNSL+ L + K +++V ++P +V ++T++ CK GMI A V
Sbjct: 325 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP-NVVVFSTVVDALCKEGMIAIAHDVV 383
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D+M V+P+++ Y +++G C + E++EA K + M+++GC PN +YN +I G C
Sbjct: 384 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 443
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+D+A L+ +M L G + T+ +++ GLC VG+ A+ ++ + PD+ +Y
Sbjct: 444 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 503
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++ CK EA+ LLK + L + +N + GEL+ A L +
Sbjct: 504 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 563
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ +YN +I GLC +G + + L +M +G + D +Y+ +++G+
Sbjct: 564 KGLQPDVRTYNIMIHGLC-KRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETF 622
Query: 455 NVMQIAHEMVTK 466
Q+ EM+ +
Sbjct: 623 GATQLLQEMLAE 634
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 144/279 (51%), Gaps = 4/279 (1%)
Query: 191 PPDVSTYTTMIRGYCKM---GMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK 247
PP +T ++ KM + + D + P++ N +IN FC L A
Sbjct: 147 PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFS 206
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ +++ GC+P+ T+N +I GLC+ G++ EA L K GF+ +V T+ +++ GLC
Sbjct: 207 VLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLC 266
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
VG A+ LR++++ N P+V +Y +I+ CK + EA +L EM +G+ P +F
Sbjct: 267 KVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIF 326
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++N++ L E LL +M +PN V ++T++ LC +G + D+VD
Sbjct: 327 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC-KEGMIAIAHDVVDM 385
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI+ G D Y+ L+ G+C ++ +++ MV K
Sbjct: 386 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 424
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 156/311 (50%), Gaps = 5/311 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ N L+ + + A +++K PD +T+ T+IRG C G I A +F
Sbjct: 185 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGC-QPDNTTFNTLIRGLCVEGKIGEALHLF 243
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D +P+++ Y T++NG CK G A + + M+ + CRPN + YN +I LC +
Sbjct: 244 DKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 303
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+V EA L ++M G ++ T+ S++ LC + ++ L ++ + + P+V +
Sbjct: 304 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 363
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V++ CK G A ++ M RG++P V ++ A+ E+D A+ + M
Sbjct: 364 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 423
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C+PN SYN +I G C + RM L+++M G D Y+ L+ G C G ++
Sbjct: 424 KGCVPNVRSYNILINGYCQIQ-RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 482
Query: 455 NVMQIAHEMVT 465
+ + + HEMV
Sbjct: 483 HAIALFHEMVA 493
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 172/361 (47%), Gaps = 5/361 (1%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
S+ A LLK + + + LI+ G + A+ F + + +Y +L+ L
Sbjct: 206 SVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGL 265
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PN 225
+V + A +V++N P+V Y T+I CK + A +F M K P+
Sbjct: 266 CKVGNTSAAIRLLRSMVQKNC-RPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPD 324
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+ YN++I+ C E + +NEM+N PN + ++ ++ LC G + A ++
Sbjct: 325 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 384
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
M G + +V T+ +++ G C+ + D+AV ++ P+V+SY ++ING+C+I
Sbjct: 385 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 444
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ D+A+ LL++M +GL ++N + L G L AI L +M +P+ V+Y
Sbjct: 445 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 504
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
++ LC + + L+ + S + D +Y+ + G C G +E + + +
Sbjct: 505 ILLDYLC-KNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 563
Query: 466 K 466
K
Sbjct: 564 K 564
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 141/328 (42%), Gaps = 14/328 (4%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAAS----LLKNSNKLSDFF 125
H N N PN ++ + D L +I+IA ++K +
Sbjct: 343 HVTTLLNEMVNSKIMPN-----VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 397
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ L+ + R + A+ F + SYN L+ ++ + A Q+
Sbjct: 398 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 457
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
+ ++ D TY T+I G C +G +++A +F M P+L+ Y +++ CK L
Sbjct: 458 LQGLIA-DTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHL 516
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA + + + L YN I G+C G ++ A+ L + + G + +V T+ M
Sbjct: 517 AEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIM 576
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC G D+A R + E + D Y +I GF + ++ A LL+EM A G
Sbjct: 577 IHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGF 636
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLK 390
V + + +L ++G LD++ L+
Sbjct: 637 SADVSTTTLIVEMLSDDG-LDQSFERLR 663
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A+ ++ + P + ++ K+ +SL +M + G+ P V++ N
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L A +L ++ ++ C P+ ++NT+I GLC+ +G++ + L D+ I
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCV-EGKIGEALHLFDKTIGE 249
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
G D Y L+ G C+ GN +++ MV K R
Sbjct: 250 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCR 287
>gi|255660882|gb|ACU25610.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 484
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 217/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGXLIENFCKVGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++ + G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN++ + M+
Sbjct: 301 HCKSGNLDAAADVLKAMI 318
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q+ K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMEXL 483
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 205/449 (45%), Gaps = 26/449 (5%)
Query: 26 SVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNP 85
SV L P+P P+ F+ LG+ K ++ + Y + A P+
Sbjct: 78 SVFNHLIDMQPTP------PISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLA----PDF 127
Query: 86 NKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFW 145
+ CY + V +++ +L+ + + + L+K + A
Sbjct: 128 ITLNILINCYCNLNKVDFG---LAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGL 184
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN-----VVPPDVSTYTTM 200
+ ++ + +Y +LL L + LA + +++ N + P++ Y T+
Sbjct: 185 LRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTI 244
Query: 201 IRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I CK G+I+ K++F M + P+++AY+++I+G C G E AK NEM++ G
Sbjct: 245 IDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGV 304
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
PN +T+N +I LC G+++EA L+ M G + T+ +++ G C+ G+ D A
Sbjct: 305 HPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARD 364
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
++ + D SY V+ING+CK G+ EA L +EM + + PTV ++N + L
Sbjct: 365 LFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLF 424
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
G++ A L +M D P +YN ++ GLC + + +L +
Sbjct: 425 REGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLC-KNNHLSEAMELFHYLENHDFQPSI 483
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+++CL+ G C+ +E IA E+ +
Sbjct: 484 QIFNCLIDGLCKARKIE----IARELFNR 508
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 166/347 (47%), Gaps = 40/347 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L Y +++ L + I +E F ++ K + PDV Y+++I G C G E AK +F
Sbjct: 238 LVCYCTIIDSLCKDGLIDKGKELFLEM-KGRGISPDVVAYSSIIHGMCHTGRWEGAKGLF 296
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M V PN++ +N +I+ CK G++EEA + M+ RG P+ TYN +I G C+
Sbjct: 297 NEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLE 356
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+D+A+ L M G + + ++ ++ G C G+ +A R +M + P V +Y
Sbjct: 357 GRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITY 416
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++ G + GK +A +L EM+ L P ++N + L +N L A+ L +
Sbjct: 417 NTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLEN 476
Query: 395 MD---------CL--------------------------PNFVSYNTIICGLCMAKGRMQ 419
D CL PN ++Y +I GLC + G+++
Sbjct: 477 HDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKS-GQLE 535
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +DL M G + ++ L++G+C+ ++ V+++ EM K
Sbjct: 536 NAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEK 582
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 163/346 (47%), Gaps = 60/346 (17%)
Query: 174 IKLAEEF--FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV--------- 222
IK +E F F+ ++ PP +S++ T+ +G + K+ FDV+++
Sbjct: 71 IKRSEAFSVFNHLIDMQPTPP-ISSFNTL------LGAVAKIKRYFDVISLYKRMSLIGL 123
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P+ + N +IN +C +++ + EM+ RG PN +T+ +++ GLC+ R+ EA
Sbjct: 124 APDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATG 183
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN---------------- 326
L+ KM G++ NV T+ ++L GLC+ G AV ++ N
Sbjct: 184 LLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCT 243
Query: 327 -------------------------MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++PDV +Y +I+G C G+ + A L EM G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P V +FN + L + G+++ A LLK M Q P+ +YNT+I G C+ +GR+ D
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCL-EGRIDDA 362
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
DL M G D Y+ L+ GYC+ G + ++ EM+ K+
Sbjct: 363 RDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKE 408
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 166/355 (46%), Gaps = 9/355 (2%)
Query: 94 CYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQA 149
CY I D L LI L +K D S +I G + A F++
Sbjct: 240 CYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEM 299
Query: 150 KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
+ ++N L+ L + ++ A +++ PD TY T+I G+C G
Sbjct: 300 VDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGE-SPDTFTYNTLIDGFCLEGR 358
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
I++A+ +F M ++ + ++YN +ING+CK G + EAKK EMM + P +TYN
Sbjct: 359 IDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNT 418
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
++ GL G+V +A L +M+++ T+ +L GLC +A+ + +
Sbjct: 419 LLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHD 478
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
P ++ + +I+G CK K + A L + GL+P V ++ + L ++G+L+ A
Sbjct: 479 FQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAK 538
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
L M + C PN V++NT++ G C MQ V +L+ M + D + S
Sbjct: 539 DLFLGMEEKGCAPNLVTFNTLMRGFC-QNDEMQKVVELLQEMAEKDFSPDASTIS 592
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 119/236 (50%), Gaps = 4/236 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A + + E + +YN+LL L R ++ A F ++ K +
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEM-KVH 442
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P+ TY ++ G CK + A ++F + +P++ +N +I+G CK ++E A
Sbjct: 443 DLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIA 502
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ N + + G PN +TY MI+GLC +G+++ AK L M G N+ T ++++G
Sbjct: 503 RELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRG 562
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
C + + V L+ + E + +PD + +V++ K K E + LL A+G
Sbjct: 563 FCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 144/314 (45%), Gaps = 12/314 (3%)
Query: 89 HHTTPCYTAITDVLLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAA-- 142
H + + D L + A LLK F + LI + G + A
Sbjct: 305 HPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARD 364
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+F ++K IE A SYN L+ + + A++ + +++ + ++P V TY T++
Sbjct: 365 LFVSMESKGIETDA--VSYNVLINGYCKSGRMVEAKKLYREMMCKEIMP-TVITYNTLLT 421
Query: 203 GYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
G + G + +A +F M V P YN +++G CK L EA + + + N +P
Sbjct: 422 GLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQP 481
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +N +I GLC +++ A+ L ++ G + NV T+ M+ GLC G+ + A
Sbjct: 482 SIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLF 541
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ E P++ ++ ++ GFC+ + + + LL+EM + P + + V +L ++
Sbjct: 542 LGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKD 601
Query: 380 GELDRAILLLKQMP 393
+ + LL P
Sbjct: 602 EKYREYLHLLPTFP 615
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 300 KSMLKGLCVVG--KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
++ LK C G K +A ++++ P + S+ ++ KI + + ISL K M
Sbjct: 59 ENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRM 118
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
GL P + N + ++D + +L +M + PN V++ +++ GLC+ R
Sbjct: 119 SLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGS-R 177
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ + L+ +M+R G+ + Y LL G C GN +++ EM+ G
Sbjct: 178 ISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNG 228
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 9/257 (3%)
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELE--EAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
D ++ P+ + CK G ++ EA N +++ P ++N ++ +
Sbjct: 47 DTVSNAPDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIK 106
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R + L +M L G + T ++ C + K D + L ++ +P+ ++
Sbjct: 107 RYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFT 166
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ- 394
++ G C + EA LL++M G +P V ++ + L G A+ L ++M
Sbjct: 167 SLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNG 226
Query: 395 -----MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+ PN V Y TII LC G + ++L M G + D YS ++ G C
Sbjct: 227 NGGFGVTIKPNLVCYCTIIDSLC-KDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCH 285
Query: 450 EGNVENVMQIAHEMVTK 466
G E + +EMV +
Sbjct: 286 TGRWEGAKGLFNEMVDE 302
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 200/423 (47%), Gaps = 56/423 (13%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKL----SDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT + L IS A L KL + LIK GNV A+ K
Sbjct: 164 YTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIAL---KLHK 220
Query: 151 QIENGACLYSYNSLLGV---------LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
++ N A Y N GV L +V A+E F ++ + ++P DV +Y+T+I
Sbjct: 221 EMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIP-DVISYSTLI 279
Query: 202 RGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
G+C G + +K +FD M V+P+++ ++ +I+ CK+G++ EAKK + M+ RG
Sbjct: 280 HGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIV 339
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
PN +TYN++I G C+ G ++ A+ L M G + + ++ +++ G C K +A+
Sbjct: 340 PNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNL 399
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSD------------------------------ 348
+++ +P+V +Y ++ G + GK
Sbjct: 400 YNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCK 459
Query: 349 -----EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
EA+ L E+++ K + +++ + L + G+L+ A L +++ Q P+ V+
Sbjct: 460 NDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVT 519
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YN +I G C G++ + L ++M +G D Y+ LL G+CE +E V+++ H+M
Sbjct: 520 YNIMIHGFCKV-GQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKM 578
Query: 464 VTK 466
V K
Sbjct: 579 VQK 581
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 180/350 (51%), Gaps = 10/350 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LIK + A F + +++ +Y +L+ L + ++ +A + +++
Sbjct: 165 TTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLN 224
Query: 187 ENV-----VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
+ P V TY+ +I G CK+G + AK++F+ M + P++++Y+T+I+GFC
Sbjct: 225 DASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCC 284
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G+ +++K +EM+++G +P+ +T++ +I LC G+V EAK L+ M G N+ T
Sbjct: 285 AGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLIT 344
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ S++ G C+VG + A ++ + PD SY +ING+CK K EA++L EM
Sbjct: 345 YNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEML 404
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
G P V ++ + + L + G++ A L M N Y + GLC
Sbjct: 405 QVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLF 464
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ +E L + + L+ YSCL+ G C+ G +E ++ E ++++G
Sbjct: 465 EAME-LFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWEL-FEKLSQEG 512
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YNSL+ V + A E F + + + P ++S YTT+I GYCK ++ A ++
Sbjct: 342 LITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEIS-YTTLINGYCKTWKVKEAMNLY 400
Query: 218 DVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M PN+ Y T++ G +KG++ +AKK M G N Y + GLC N
Sbjct: 401 NEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKN 460
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+ EA L +++ FK N+ + ++ GLC GK + A + + + PDV +Y
Sbjct: 461 DCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTY 520
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I+GFCK+G+ D A L ++M G P + ++N + E +L+ I LL +M Q
Sbjct: 521 NIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQ 580
Query: 395 MDCLPNFVSYNTIICGLC 412
D PN S ++ LC
Sbjct: 581 KDVSPNAASCTIVVDMLC 598
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 122/237 (51%), Gaps = 4/237 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SY +L+ + +K A ++++++ P+V+TY T+++G + G + +AKK+F V
Sbjct: 379 SYTTLINGYCKTWKVKEAMNLYNEMLQVGK-SPNVTTYGTLLKGLFQKGKVGDAKKLFGV 437
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V N Y ++G CK L EA + NE+ + + N Y+ +I GLC G+
Sbjct: 438 MKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGK 497
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ A L K+ G + +V T+ M+ G C VG+ D A + E PD+ +Y
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNT 557
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
++ GFC+ K +E I LL +M + + P S V +L ++ + + + LL + P
Sbjct: 558 LLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFP 614
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 27/292 (9%)
Query: 237 CKKGELE--EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
CK G + +A + MM P ++N ++ GL + L +MRL G
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
++ T + LC V + +A+ + ++ P+V +Y +I G C + EA L
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ------MDCLPNFVSYNTII 408
M+ G P ++ + + L + G ++ A+ L K+M ++C P ++Y+ II
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT--- 465
GLC GR + ++L + M G D YS L+ G+C G + + EMV
Sbjct: 245 DGLCKV-GREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGV 303
Query: 466 ---------------KKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFV 502
K+G++ + K L ++ ++ ++T S I F V
Sbjct: 304 QPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMV 355
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 186/357 (52%), Gaps = 6/357 (1%)
Query: 111 AASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV 169
AA L + SD + S LI AY + G ++ AI + ++ + + +L L+
Sbjct: 42 AAILETKGTQRSDIXVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLM 101
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNL 226
++ KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P++
Sbjct: 102 KLKYFKLVWGFYQEIL-ECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSV 160
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
++YNT+++G+ + G+L+E + + M G +P+ TY+ +I GLC ++DEA L +
Sbjct: 161 VSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDE 220
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M + G T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 221 MLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGB 280
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
+A L+ EM +G KP ++ + + G+LD A K+M Q + + V+Y
Sbjct: 281 LKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTA 340
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I GLC +GR D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 341 LISGLC-QEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEM 396
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 158/293 (53%), Gaps = 6/293 (2%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF- 180
S +F + L+ + GN++ A F + + SYN+L+ +R+ L E F
Sbjct: 124 SLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGD--LDEGFR 181
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFC 237
+ + V PDV TY+ +I G CK ++ A ++FD M V P + + T+I+G C
Sbjct: 182 LKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHC 241
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G ++ A + +M+++ P+ +TYN +IYGLC G + +A +L+ +M L G K +
Sbjct: 242 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKI 301
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ G C G D A + + +++ N+ D +Y +I+G C+ G+S +A +L+EM
Sbjct: 302 TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 361
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+ G KP ++ + + G++ LLK+M + +P+ V+YN ++ G
Sbjct: 362 LSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 19/260 (7%)
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC------------------RPNELTYNA 266
L +Y TMI+ C L EAK + +++R R + ++
Sbjct: 1 TLHSYCTMIHFLCTHQMLSEAKSLIQFVVSRKGKGSASAVFAAILETKGTQRSDIXVFSG 60
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I +G + +A R + F T + +L+ L + F G+ + ++E
Sbjct: 61 LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYQEILECG 120
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ + ++++ FCK G A S+ + GL+P+V S+N + + G+LD
Sbjct: 121 YPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGF 180
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L M P+ +Y+ +I GLC + +M + +L D M+ G ++ L+ G
Sbjct: 181 RLKSAMHASGVQPDVYTYSVLINGLC-KEXKMDEANELFDEMLVXGLVPXGVTFTTLIDG 239
Query: 447 YCEEGNVENVMQIAHEMVTK 466
+C+ G V+ M+I +M+++
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQ 259
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 176/379 (46%), Gaps = 45/379 (11%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFH 182
+KL+ A G A+ +KQ+E +Y+ + L+ + + LA F
Sbjct: 97 FTKLLSAIVKMGQYYGAVISL--SKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFS 154
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKK 239
+++K + PD T+ T+I G CK+G A + FD +P + Y T+ING CK
Sbjct: 155 KMIKLGL-QPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKI 213
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
GE A +M GC+PN +TYN +I LC + V+EA + + M+ ++ T+
Sbjct: 214 GETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTY 273
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR- 358
S+++GLC ++ +A L + N+ P++ ++ V+++ CK GK EA + K M
Sbjct: 274 NSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTE 333
Query: 359 ----------------------------------ARGLKPTVFSFNAVFRILVENGELDR 384
+G KP FS+N + + + +D
Sbjct: 334 MGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDE 393
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A L +M P+ V+YNT+I GLC GR+++ +DL M +G+ D YS LL
Sbjct: 394 AKQLFNEMIHQGLTPDNVNYNTLIHGLCQL-GRLREAQDLFKNMHSNGNLPDLFTYSMLL 452
Query: 445 KGYCEEGNVENVMQIAHEM 463
G+C+EG + ++ M
Sbjct: 453 DGFCKEGYLGKAFRLFRVM 471
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 138/261 (52%), Gaps = 4/261 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++N L+ + + + A+ F + + E V PDV TY++++ GY I A+K+F
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVF-KTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLF 363
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M K P+ +YN +I G+CK ++EAK+ NEM+++G P+ + YN +I+GLC
Sbjct: 364 DAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQL 423
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+ EA+ L M NG ++ T+ +L G C G +A R + + PD+ Y
Sbjct: 424 GRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMY 483
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I+ CK G +A L E+ +GL P V + + L + G LD A+ + M
Sbjct: 484 NILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEG 543
Query: 395 MDCLPNFVSYNTIICGLCMAK 415
C P+ SYN II G K
Sbjct: 544 DGCPPDEFSYNVIIRGFLQYK 564
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 166/332 (50%), Gaps = 8/332 (2%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
N+ A+ F+ E C+ + LL +V++ A + ++ + PD+ T
Sbjct: 74 NIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTL 133
Query: 198 TTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+ +I + + ++ A VF M ++P+ + +NT+ING CK G+ +A + ++
Sbjct: 134 SILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEA 193
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
GC+P TY +I GLC G A L KM G + NV T+ ++ LC ++
Sbjct: 194 SGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNE 253
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+ + ++PD+ +Y +I G C + EA +LL EM + + P +F+FN +
Sbjct: 254 ALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVD 313
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE--DLVDRMIRSG 432
+ + G++ A + K M +M P+ V+Y++++ G + RM+ VE L D MI G
Sbjct: 314 AICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSL---RMEIVEARKLFDAMITKG 370
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D Y+ L+KGYC+ ++ Q+ +EM+
Sbjct: 371 CKPDAFSYNILIKGYCKAKRIDEAKQLFNEMI 402
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 174/376 (46%), Gaps = 8/376 (2%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE 153
C++ + V L+ S+ S L + ++ + LI G A+ +F +
Sbjct: 139 CFSHLQRVDLAFSVFSKMIKLGLQPDAVT---FNTLINGLCKVGKFAQAVEFFDDFEASG 195
Query: 154 NGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
+Y+Y +++ L ++ A F ++ +E P+V TY +I CK ++ A
Sbjct: 196 CQPTVYTYTTIINGLCKIGETTAAAGLFKKM-EEAGCQPNVVTYNILIDSLCKDKLVNEA 254
Query: 214 KKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+F M K P++ YN++I G C +EA +NEM + PN T+N ++
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
+C G+V EA+ + M G + +V T+ S++ G + + +A ++ PD
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPD 374
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
SY ++I G+CK + DEA L EM +GL P ++N + L + G L A L K
Sbjct: 375 AFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFK 434
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
M LP+ +Y+ ++ G C +G + L M + D MY+ L+ C+
Sbjct: 435 NMHSNGNLPDLFTYSMLLDGFC-KEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKF 493
Query: 451 GNVENVMQIAHEMVTK 466
GN+++ ++ E+ +
Sbjct: 494 GNLKDARKLFSELFVQ 509
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 144/291 (49%), Gaps = 7/291 (2%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMING 235
F H + +E + P + +T ++ KMG A K ++ + P++ + +I+
Sbjct: 82 FNHMLHREPL--PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDC 139
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
F ++ A ++M+ G +P+ +T+N +I GLC G+ +A +G +
Sbjct: 140 FSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPT 199
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V T+ +++ GLC +G+ A G + + EA P+V +Y ++I+ CK +EA+ +
Sbjct: 200 VYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFS 259
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
M+A+ + P +F++N++ + L A LL +M ++ +PN ++N ++ +C +
Sbjct: 260 YMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAIC-KE 318
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G++ + + + M G D YS L+ GY + ++ M+TK
Sbjct: 319 GKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITK 369
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL-GVLVRVNSIKLAEEFFH 182
F + L+ A G V A F ++ + +Y+SL+ G +R+ ++ A + F
Sbjct: 306 FTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVE-ARKLFD 364
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
++ + PD +Y +I+GYCK I+ AK++F+ M + P+ + YNT+I+G C+
Sbjct: 365 AMITKGC-KPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQL 423
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G L EA+ M + G P+ TY+ ++ G C G + +A L M+ K +++ +
Sbjct: 424 GRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMY 483
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ +C G A + + P+V+ Y +IN CK G DEA+ + M
Sbjct: 484 NILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEG 543
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
G P FS+N + R ++ + RA L+ +M
Sbjct: 544 DGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEM 576
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 111/207 (53%), Gaps = 4/207 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+SYN L+ + I A++ F++++ + + P +V+ Y T+I G C++G + A+ +F
Sbjct: 376 FSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVN-YNTLIHGLCQLGRLREAQDLFK 434
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M P+L Y+ +++GFCK+G L +A + M + +P+ YN +I +C G
Sbjct: 435 NMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFG 494
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ +A+ L +++ + G NV + +++ LC G D+A+ RN+ PD SY
Sbjct: 495 NLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYN 554
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGL 362
V+I GF + A L+ EMR RG
Sbjct: 555 VIIRGFLQYKDESRAAQLIGEMRDRGF 581
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G ++ A F N L++Y+ LL + + A F ++++
Sbjct: 416 LIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLF-RVMQST 474
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+ PD++ Y +I CK G +++A+K+F + V+ PN+ Y T+IN CK+G L+EA
Sbjct: 475 YLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEA 534
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ M GC P+E +YN +I G A L+ +MR GF T
Sbjct: 535 LEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 224/492 (45%), Gaps = 42/492 (8%)
Query: 6 RSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQ 65
+S+ NIS+ +++ S I R + N K IS+ P+ + +I EQ
Sbjct: 53 KSMFNISKYA--KLIMFCNVSNIGRSSVVNLQSKPISTTPVPT------HQHIAHLILEQ 104
Query: 66 TNPYHALFFFNWASN-PNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK------NS 118
+ AL F WASN PN + H Y A+ L S +L S
Sbjct: 105 KSASQALQTFRWASNLPN-----FIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGS 159
Query: 119 NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAE 178
F++ +++ G V+ I + L +NS+L VLV+ I LA
Sbjct: 160 PPDESIFVT-IVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVK-EDIDLAR 217
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMING 235
EF+ + + N V D T+ +++G C I +A K+ VM + PN + YNTMI+
Sbjct: 218 EFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHA 277
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
CK G++ A+ MNEM+ P+++T+N +I C + +A +L+ K GF +
Sbjct: 278 LCKNGKVGRARSLMNEMV----EPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPD 333
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V T ++ LC G+ + V L V DV +Y +I GFC +GK+ +LK
Sbjct: 334 VVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLK 393
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+M +G P V ++N + ++G LD AI L M NF++Y+T+I GLC +
Sbjct: 394 DMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLC-SG 452
Query: 416 GRMQDVEDLVDRM--IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKL 473
GRM+D +++ M R G + Y+ ++ G ++ E ++ L K+
Sbjct: 453 GRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEF----------LTKM 502
Query: 474 KNFLTRVVDALL 485
+ R VD L
Sbjct: 503 EKLFPRAVDRSL 514
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 139/297 (46%), Gaps = 47/297 (15%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP---PDVSTYTTMIRGYCKMGMIENAKKV 216
+YN+L+ + K+ H+++K+ + P+V TY + GYC GM+++A +
Sbjct: 371 AYNTLIKGFCMLGKAKVG----HRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDL 426
Query: 217 FDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM-NRGCRPNELT-YNAMIYGL 271
F+ M + N + Y+T+I G C G +E+ K + M +RG ++ YN++IYGL
Sbjct: 427 FNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGL 486
Query: 272 ---------------------------------CINGRVDEAKMLMAKMRLNGFKDNVST 298
C G + +AK + +M G +V
Sbjct: 487 YKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLV 546
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ ++ G C G +A + +++ P ++ +I+ FC GK A+ L+++M
Sbjct: 547 YVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMV 606
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
RG P + S++ + L G+ +A+ L QM + D LP++ ++N+++ LC+ +
Sbjct: 607 GRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML--LCLTQ 661
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 200/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----------------------KNSN 119
+P + + HT Y + L +H ++ A +L+ K +
Sbjct: 3 SPTNSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQ 62
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+ + S LI AY + G + A+ F ++ + + +L +++ KL
Sbjct: 63 RSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + ++ +CK G + A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYKEIL-ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ G+L+E + + M G +P+ TY+ +I GLC ++++A L +M NG N
Sbjct: 182 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G D A+ + ++ +PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A+ K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLC-REG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ D E ++ M+ G D Y+ ++ +C++G+V+ ++ EM
Sbjct: 361 QSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEM 407
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 153/284 (53%), Gaps = 6/284 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G ++ A F + + + S+N+L+ +R+ L E F
Sbjct: 137 YFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGD--LDEGFRLK 194
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK + +A ++F M + PN + + T+I+G CK
Sbjct: 195 SAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKT 254
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + EM+ +G P+ +TYN +IYGLC G + +A+ L+ +M + G K + T+
Sbjct: 255 GSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITY 314
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G + A+ Y + +++ N+ D +Y +I+G C+ G+S +A +L+EM +
Sbjct: 315 TTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLS 374
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GLKP ++ + + G++ LLK+M + +P V+
Sbjct: 375 VGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 4/304 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++YN L+ L R + A F Q+ + D +YT +I+G C G I++A +VF
Sbjct: 126 FTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFA 185
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M+ +P + Y +++G CK + EA+ + EM+N+G PN +TYNA+I GLC G
Sbjct: 186 KMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEG 245
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R D+ L+ KM + + T+ ++ GLC GK L + + +V +Y
Sbjct: 246 RFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYN 305
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+ING+CK G A+ +L+ M+ + P V +FN V G++ +A+ L QM
Sbjct: 306 ALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGA 365
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
PN V++N++I G C + G + L+D M G D Y+ + C+EG +E
Sbjct: 366 GLSPNTVTFNSLISGQC-SVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEE 424
Query: 456 VMQI 459
+
Sbjct: 425 AHSL 428
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 158/344 (45%), Gaps = 44/344 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LIK G + A F ++ G C +++Y LL L +V + AE ++V
Sbjct: 167 LIKGLCAAGRIDDACRVF---AKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMV 223
Query: 186 KENVVP----------------------------------PDVSTYTTMIRGYCKMGMIE 211
+ VVP PD TYT ++ G CK G +
Sbjct: 224 NKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVG 283
Query: 212 NAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
+ KV V +L YN +ING+CK G+++ A + M P T+N +I
Sbjct: 284 HGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVI 343
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
+G C G+V +A + +M G N T S++ G C VG+ A+ L + E +
Sbjct: 344 HGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVL 403
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PD ++Y + I+ C G+ +EA SL + +G+K + ++ + G++D A L
Sbjct: 404 PDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGL 463
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+++M +C+P+ +YNT+I GLC K R+ DL+D+M + G
Sbjct: 464 MEKMASENCMPDVHTYNTLIDGLCKVK-RLDRAIDLLDKMKKQG 506
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 162/331 (48%), Gaps = 9/331 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQI 184
++++ G V H+A I G L +YN+L+ + +K A + Q+
Sbjct: 270 TQVVHGLCKHGKVGHGAKVLHEA--IGKGVALEVLTYNALINGYCKGGDMKAALDVL-QL 326
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
+K N V P V T+ +I G+C G + A M + PN + +N++I+G C GE
Sbjct: 327 MKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGE 386
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ A + ++ M G P+ TY I LC G+++EA L + + + G K + + S
Sbjct: 387 RKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTS 446
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C VG D A G + + N PDV +Y +I+G CK+ + D AI LL +M+ +G
Sbjct: 447 LVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQG 506
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN-TIICGLCMAKGRMQD 420
++PT +FN + + ++ + + A + +QM C P+ +Y I + ++
Sbjct: 507 IEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEEN 566
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
++ V M +G D Y+ ++K Y + G
Sbjct: 567 IDMAVVEMHEAGVFPDVETYNAIIKAYVDAG 597
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 150/333 (45%), Gaps = 27/333 (8%)
Query: 191 PPDVSTYTTMIRGYCKMG----MIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
P DV ++ + Y G + + F M PN YNT+IN CK L
Sbjct: 48 PSDVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLA 107
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKSM 302
+A+ + M G P+ TYN ++ GLC G + A L +M R G + ++ +
Sbjct: 108 DARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTIL 167
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+KGLC G+ D A + P V +Y V+++G CK+ + EA +LL EM +G+
Sbjct: 168 IKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGV 227
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P V ++NA+ L + G D LL++M P+ +Y ++ GLC G++
Sbjct: 228 VPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLC-KHGKVGHGA 286
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK--------------- 467
++ I G L+ Y+ L+ GYC+ G+++ + + M +
Sbjct: 287 KVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGF 346
Query: 468 ---GRLLKLKNFLTRVVDALLLMWIVTGGSWIS 497
G++ K FLT++ A L VT S IS
Sbjct: 347 CCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLIS 379
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 157/348 (45%), Gaps = 19/348 (5%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+++I + G V A+ + Q ++NSL+ V K+A +++
Sbjct: 340 NEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLL-DLME 398
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
E V PD TY I C G +E A +F + +K + + Y ++++G+C+ G+++
Sbjct: 399 EYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDID 458
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A M +M + C P+ TYN +I GLC R+D A L+ KM+ G + T ++
Sbjct: 459 SAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILI 518
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI--NGFCKIGKSDEAISLLKEMRARG 361
K + K A ++ + PD ++Y + I + F K + + EM G
Sbjct: 519 KQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAG 578
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG----- 416
+ P V ++NA+ + V+ G ++A +M + P+ +Y+ ++ +C
Sbjct: 579 VFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFD 638
Query: 417 -----RMQDV---EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+M DV ++L ++M S + Y LL+G C + +E V
Sbjct: 639 NEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEV 686
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 110/266 (41%), Gaps = 31/266 (11%)
Query: 173 SIKLAEEFFHQIVKENVVP------------PDVSTYTTMIRGYCKMGMIENA----KKV 216
++K++ ++F KE + PDV TY +I+ Y G+ E A K+
Sbjct: 550 TLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKM 609
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGE--------------LEEAKKCMNEMMNRGCRPNEL 262
V + P+ Y+ ++N C K + + ++ +M P
Sbjct: 610 LSV-PIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGIS 668
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
TY A++ GLC R++E + L+ KM+ N + +L C + + +A R++
Sbjct: 669 TYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSM 728
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ P +KS ++++G C G A+S+ +M G + + L E G
Sbjct: 729 AHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHA 788
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTII 408
+ +L M C+ + +Y +++
Sbjct: 789 GACLEMLSVMDAKKCVASTRTYASLV 814
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 25/263 (9%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP--PDVS 195
N+ A+ H+A + + +YN+++ V L E+ F VK VP PD +
Sbjct: 566 NIDMAVVEMHEAGVFPD---VETYNAIIKAYVDAG---LKEKAFFAHVKMLSVPIDPDCT 619
Query: 196 TYTTMIRGYC--------------KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCK 238
TY+ ++ C KM + N +++F+ M P + Y ++ G C
Sbjct: 620 TYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCN 679
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ LEE + + +M +E + ++ C EA M F+ + +
Sbjct: 680 QCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKS 739
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+L GLC G AV +++ N D ++++I+ + G + + +L M
Sbjct: 740 CCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMD 799
Query: 359 ARGLKPTVFSFNAVFRILVENGE 381
A+ + ++ ++ R++ E E
Sbjct: 800 AKKCVASTRTYASLVRLVAELNE 822
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 155/276 (56%), Gaps = 5/276 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+LL L + + AEE +++ KE VPPD+ T+TT+I GYC+ G IE A + FD
Sbjct: 371 TYNTLLNGLCKERRLSDAEELLNEM-KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDT 429
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
++ ++P+++ YNT+I+G C++G+L +A + ++M +R PN +TY+ +I C G+
Sbjct: 430 ISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQ 489
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD A + +M G N+ T+ S++KG C G + +L + + PD+ +Y
Sbjct: 490 VDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNT 549
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+ K GK EA +LLK M ++P ++N + +G + A + K+M
Sbjct: 550 LIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARG 609
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
P+ +Y ++I G +A G + L D M++ G
Sbjct: 610 IEPDRYTYMSMINGHVVA-GNSKKSFQLHDEMLQKG 644
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 146/272 (53%), Gaps = 6/272 (2%)
Query: 193 DVSTYT--TMIRGYCK---MGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK 247
+V+TYT M+ YCK G ++ + V P+++ +N M++ + G++E A
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
++ M+++G +P +TYN+++ GL NGR D+A+ + M G +V + ++ G C
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G+ ++A+ + + + + PDV S+ +I F + G+ D A L+EMR GL P
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+ V G + A+ + +M CLP+ V+YNT++ GLC + R+ D E+L++
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKER-RLSDAEELLNE 394
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
M G D ++ L+ GYC +GN+E +Q
Sbjct: 395 MKERGVPPDLCTFTTLIHGYCRDGNIEKALQF 426
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 178/376 (47%), Gaps = 40/376 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G ++ A+ ++ + + + S++ L+G+ R + A E+ ++ +E
Sbjct: 270 LIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM-REF 328
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEA 245
+ PD YT +I G+C+ G++ A +V D M P+++ YNT++NG CK+ L +A
Sbjct: 329 GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDA 388
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ +NEM RG P+ T+ +I+G C +G +++A + + ++ T+ +++ G
Sbjct: 389 EELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDG 448
Query: 306 LCVVG-----------------------------------KFDQAVGYLRNVMEANMNPD 330
+C G + D A +L ++ + P+
Sbjct: 449 MCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPN 508
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ +Y +I G+C+ G + L +MR + P + ++N + V+ G++ A LLK
Sbjct: 509 IMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLK 568
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
M + P+ V+YN II G + G MQ+ + + +M G D Y ++ G+
Sbjct: 569 IMENENVQPDAVTYNMIISGFSV-HGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVA 627
Query: 451 GNVENVMQIAHEMVTK 466
GN + Q+ EM+ K
Sbjct: 628 GNSKKSFQLHDEMLQK 643
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 175/344 (50%), Gaps = 9/344 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQ--AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
++ A G+V+AA+ +K I+ G L +YNS+L L+R A E F + +
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPG--LVTYNSVLKGLLRNGRWDKAREVF-RAMD 256
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
V PDV ++ +I G+C+ G +E A + + M V P++++++ +I F ++GE++
Sbjct: 257 ACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMD 316
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + + EM G P+ + Y +I G C G + EA + +M G +V T+ ++L
Sbjct: 317 HAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLL 376
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GLC + A L + E + PD+ ++ +I+G+C+ G ++A+ + + L+
Sbjct: 377 NGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLR 436
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + ++N + + G+L +A L M + PN V+Y+ +I C KG++ +
Sbjct: 437 PDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHC-EKGQVDNAFA 495
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+D M+ G + Y+ ++KGYC GNV Q +M K
Sbjct: 496 FLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDK 539
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 159/303 (52%), Gaps = 5/303 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S+N L+G R ++ A F+ ++ + V PDV +++ +I + + G +++A +
Sbjct: 266 SFNMLIGGFCRAGELEEALRFYKEM-RGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLRE 324
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+ + Y +I GFC+ G + EA + +EM+ GC P+ +TYN ++ GLC R
Sbjct: 325 MREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR 384
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ +A+ L+ +M+ G ++ T +++ G C G ++A+ + + + + PD+ +Y
Sbjct: 385 LSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNT 444
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C+ G +A L +M +R + P +++ + E G++D A L +M
Sbjct: 445 LIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKG 504
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+PN ++YN+II G C + G + + + +M D Y+ L+ GY +EG +
Sbjct: 505 IVPNIMTYNSIIKGYCRS-GNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEA 563
Query: 457 MQI 459
+
Sbjct: 564 FNL 566
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 154/310 (49%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
++N ++ R ++ A +V + + P + TY ++++G + G + A++VF
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGI-KPGLVTYNSVLKGLLRNGRWDKAREVFRA 254
Query: 218 -DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
D V P++ ++N +I GFC+ GELEEA + EM R P+ ++++ +I G
Sbjct: 255 MDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGE 314
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A + +MR G + + ++ G C G +A+ ++ PDV +Y
Sbjct: 315 MDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNT 374
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++NG CK + +A LL EM+ RG+ P + +F + +G +++A+ +
Sbjct: 375 LLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR 434
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+YNT+I G+C +G + +L D M + YS L+ +CE+G V+N
Sbjct: 435 LRPDIVTYNTLIDGMC-RQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNA 493
Query: 457 MQIAHEMVTK 466
EMV K
Sbjct: 494 FAFLDEMVNK 503
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 135/278 (48%), Gaps = 39/278 (14%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ LI Y GN++ A+ +F +
Sbjct: 407 FTTLIHGYCRDGNIEKALQFF------------------------------------DTI 430
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
+ + PD+ TY T+I G C+ G + A +++D M + PN + Y+ +I+ C+KG++
Sbjct: 431 SDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQV 490
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ A ++EM+N+G PN +TYN++I G C +G V + + + KMR + ++ T+ ++
Sbjct: 491 DNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTL 550
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G GK +A L+ + N+ PD +Y ++I+GF G EA + K+M ARG+
Sbjct: 551 IHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGI 610
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
+P +++ ++ V G ++ L +M Q P+
Sbjct: 611 EPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 176/348 (50%), Gaps = 40/348 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YNS+L L R A E F ++ + V PDV ++T +I G+C++G IE A K++
Sbjct: 226 IVTYNSVLKGLCRSGMWDKAWEVFKEM-DDFGVAPDVRSFTILIGGFCRVGEIEEALKIY 284
Query: 218 DVMT---VKPNLLA-----------------------------------YNTMINGFCKK 239
M +KP+L++ Y +I GFC+
Sbjct: 285 KEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRA 344
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G + +A + +EM+ GC P+ +TYN ++ GLC R+ +A+ L+ +MR G ++ T
Sbjct: 345 GLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTF 404
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C+ GK D+A+ ++ + PD+ +Y +I+G C+ G D+A L +M +
Sbjct: 405 TTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 464
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
R + P +++ + E G+++ A L +M LPN ++YN+II G C + G +
Sbjct: 465 REIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS-GNVS 523
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ + +M+ + + D Y+ L+ GY +E + + ++ + M +K
Sbjct: 524 KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 157/310 (50%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
++N ++ R + A +V + + P + TY ++++G C+ GM + A +VF
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGL-KPGIVTYNSVLKGLCRSGMWDKAWEVFKE 251
Query: 218 -DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
D V P++ ++ +I GFC+ GE+EEA K EM +RG +P+ ++++ +I G+
Sbjct: 252 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 311
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A + +MR G + + ++ G C G A+ ++ PDV +Y
Sbjct: 312 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 371
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++NG CK + +A LL EMR RG+ P + +F + G+LD+A+ L M
Sbjct: 372 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 431
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+YNT+I G+C +G + DL D M + YS L+ +CE+G VE+
Sbjct: 432 LRPDIVTYNTLIDGMC-RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 490
Query: 457 MQIAHEMVTK 466
EM+ K
Sbjct: 491 FGFLDEMINK 500
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 142/280 (50%), Gaps = 36/280 (12%)
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N N M++ +CK E ++ ++EM R P+ +T+N M+ G + A L+
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G K + T+ S+LKGLC G +D+A + + + + PDV+S+ ++I GFC++
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM------PQ---- 394
G+ +EA+ + KEMR RG+KP + SF+ + + G++D A+ L++M P
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334
Query: 395 -------------------------MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
CLP+ V+YNT++ GLC + R+ D E L++ M
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER-RLLDAEGLLNEMR 393
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
G D ++ L+ GYC EG ++ +Q+ M+ ++ R
Sbjct: 394 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 433
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 171/346 (49%), Gaps = 11/346 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAK---QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
S LI + RG + A+ + + + + +G Y ++G R + A +
Sbjct: 300 SCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI---YTMVIGGFCRAGLMSDALRVRDE 356
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+V +P DV TY T++ G CK + +A+ + + M V P+L + T+I+G+C +G
Sbjct: 357 MVGCGCLP-DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEG 415
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L++A + + M+N+ RP+ +TYN +I G+C G +D+A L M N T+
Sbjct: 416 KLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYS 475
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ C G+ + A G+L ++ + P++ +Y +I G+C+ G + L++M
Sbjct: 476 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 535
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+ P + ++N + ++ ++ A LL M + P+ V+YN +I G + G +Q+
Sbjct: 536 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSV-HGNVQE 594
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ ++M G D Y ++ G+ GN + Q+ EM+ +
Sbjct: 595 AGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 640
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 142/279 (50%), Gaps = 39/279 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+LL L + + AE +++ +E VPPD+ T+TT+I GYC G ++ A ++FD
Sbjct: 368 TYNTLLNGLCKERRLLDAEGLLNEM-RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 426
Query: 220 M---TVKPNLLAYNTMINGFCKKGEL---------------------------------- 242
M ++P+++ YNT+I+G C++G+L
Sbjct: 427 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQ 486
Query: 243 -EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
E+A ++EM+N+G PN +TYN++I G C +G V + + + KM +N ++ T+ +
Sbjct: 487 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 546
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G K A L + + + PDV +Y ++INGF G EA + ++M A+G
Sbjct: 547 LIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG 606
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
++P +++ ++ V G A L +M Q P+
Sbjct: 607 IEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+ L+ ++ A F +++ + ++P ++ TY ++I+GYC+ G + +K
Sbjct: 473 TYSILIDSHCEKGQVEDAFGFLDEMINKGILP-NIMTYNSIIKGYCRSGNVSKGQKFLQK 531
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+L+ YNT+I+G+ K+ ++ +A K +N M +P+ +TYN +I G ++G
Sbjct: 532 MMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGN 591
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
V EA + KM G + + T+ SM+ G G +A +++ PD K
Sbjct: 592 VQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDK 647
>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 484
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSAKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFXVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ C G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQAAKAEALVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 149/318 (46%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFXVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
C GN++ + M+
Sbjct: 301 QCNSGNLDAAADVLKAMI 318
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 167/343 (48%), Gaps = 8/343 (2%)
Query: 129 LIKAYGDRGNVKAAIFW-FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
L+K + G V+ A W F + L +YN ++ L + A E + + K+
Sbjct: 340 LVKGFCQAGRVQEA--WKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKD 397
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEE 244
PD T+ T+I G C+ G A +F+ V + ++ +Y++MING C G L +
Sbjct: 398 VACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVD 457
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A K +M GC+PN YNA+I G C R +A + +KM NG V T+ +++
Sbjct: 458 AVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLID 517
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC K+ +A R ++E PD+ +Y +I G K D+A+S+ K++ +GLK
Sbjct: 518 GLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKV 577
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQ-MDCLPNFVSYNTIICGLCMAKGRMQDVED 423
V N + L G++D A+ + M + +C PN V+YNT++ GL G +
Sbjct: 578 DVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGL-YETGYIDKAAT 636
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L + G D Y+ +KG C + +Q+ E++++
Sbjct: 637 LWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR 679
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 183/400 (45%), Gaps = 50/400 (12%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG++ A+ F ++ + +Y++L+ L + + + A + ++ + V PDV
Sbjct: 171 RGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRV-QPDVV 229
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
Y ++ G K G E +V+D + +PNL YN M++G CK G +E +
Sbjct: 230 CYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWER 289
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG- 310
M+ +P+ +TY +I+GLC +G VD A + +++ G + + + S++KG C G
Sbjct: 290 MVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGR 349
Query: 311 -----KFDQAVGY--LRNVMEANMN---------------------------PDVKSYEV 336
KF + G+ LRN+ N+ PD ++
Sbjct: 350 VQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGT 409
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C+ G +++A ++ +E R G + VFS++++ L G L A+ + ++M +
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C PN YN +I G C R D + +M +G + Y+ L+ G C+ +
Sbjct: 470 CKPNSHIYNALISGFCQVY-RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEA 528
Query: 457 MQIAHEMV--------TKKGRLLKLKNFLTRVVDALLLMW 488
+A EMV T G L++ F + +D L +W
Sbjct: 529 SSVAREMVENGFTPDITTYGSLIR-GLFSDKKIDDALSIW 567
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 159/352 (45%), Gaps = 46/352 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENV---VPPDVSTYTTMIRGYCKMGMIENAKKV 216
S+N+LL VR A+ FF + + P++ TY ++R C G ++ A +
Sbjct: 121 SHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTL 180
Query: 217 FDVM--------------------------------------TVKPNLLAYNTMINGFCK 238
FD + V+P+++ YN ++ G K
Sbjct: 181 FDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFK 240
Query: 239 KGELEEAKKCMNEMM-NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
GE E+ + ++++ + G RPN TYN M+ GLC GR E + +M N + +V
Sbjct: 241 AGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVI 300
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++ GLC G D A +++ + D Y ++ GFC+ G+ EA
Sbjct: 301 TYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA 360
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ-MDCLPNFVSYNTIICGLCMAKG 416
GL+ + ++N + + L ++G +D AI L + + + C+P+ V++ T+I GLC G
Sbjct: 361 GFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQ-NG 418
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ + SG LD YS ++ G C G + + +++ +E + K G
Sbjct: 419 FANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV-YEKMDKDG 469
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 141/284 (49%), Gaps = 5/284 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G A F +A+ ++SY+S++ L V + A + + ++ K+
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P+ Y +I G+C++ +A +++ M P ++ YNT+I+G CK + +EA
Sbjct: 470 C-KPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEA 528
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
EM+ G P+ TY ++I GL + ++D+A + ++ G K +V H ++ G
Sbjct: 529 SSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHG 588
Query: 306 LCVVGKFDQAVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
LC GK D+A+ ++ E N P++ +Y +++G + G D+A +L + GL+P
Sbjct: 589 LCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEP 648
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+ S+N + L + I LL ++ +P +++N ++
Sbjct: 649 DIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 137/276 (49%), Gaps = 10/276 (3%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT-------VKPNLLAYNTMINGFCKKGELEE 244
P + ++ ++ + + +A F ++ + PNL YN ++ C +G+L+
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDR 176
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + + R P+ +TY+ ++ GL R+D A L+ +M + + +V + ++L
Sbjct: 177 AVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLG 236
Query: 305 GLCVVGKFDQAVG-YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G G+F++ + + + V + P++ +Y V+++G CK G+ E + + M A L+
Sbjct: 237 GCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++ + L +G++D A + ++ + + + YN+++ G C A GR+Q+
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQA-GRVQEAWK 355
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
D +G + Y+ ++KG + G V+ +++
Sbjct: 356 FWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIEL 390
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF----KDNVSTHKSMLKGLCVVGK 311
GC P ++NA++ R +A A + F N+ T+ +L+ LC G
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+AV ++ + PD +Y ++ G K + D A+ LL EM ++P V +NA
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233
Query: 372 VFRILVENGELDRAILLLKQM-PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ + GE ++ + + ++ PN +YN ++ GLC GR ++V ++ +RM+
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKF-GRFKEVGEVWERMVA 292
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ D Y L+ G C G+V+ ++ E++
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMR----ARGLKPTVFSFNAVFRILVENGELD 383
NP ++S+ +++ F + + +A + + R + P + ++N V R L G+LD
Sbjct: 116 NPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLD 175
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
RA+ L + + P+ ++Y+T++CGL + R+ DL+D M RS D Y+ L
Sbjct: 176 RAVTLFDSLRRRQVAPDRITYSTLMCGLA-KQDRLDHALDLLDEMPRSRVQPDVVCYNAL 234
Query: 444 LKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
L G + G E VM++ ++V G L +
Sbjct: 235 LGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 168/315 (53%), Gaps = 14/315 (4%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKE--NVVPPDVSTYTTMIRGYCKMGM------ 209
++SYN+LL L N + A E H + + PPDV +Y T++ G+ K G+
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTA 222
Query: 210 --IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
++ A +V + M V P+ + YN++++G+C G+ +EA + +M + G PN +TY
Sbjct: 223 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 282
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
++++ LC NGR EA+ + M G + +++T++++L+G C G+ ++ ++
Sbjct: 283 SSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVR 342
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ PD+ +Y +I+G C GK DEA LL M + G+KP + ++ + +D
Sbjct: 343 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 402
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A+ L K+M PN ++YN I+ GL + R ++L + +SG L+ + Y+ +L
Sbjct: 403 ALALFKEMVSSGVSPNIITYNIILQGLFHTR-RTAAAKELYVSITKSGTQLELSTYNIIL 461
Query: 445 KGYCEEGNVENVMQI 459
G C+ + +++
Sbjct: 462 HGLCKNNLTDEALRM 476
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 150/275 (54%), Gaps = 4/275 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
++ + V P+V TY++++ CK G A+K+FD MT ++P++ Y T++ G CK+G
Sbjct: 270 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGR 329
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ E++K + M+ G +P+ +TYN +I G C+ G++DEA L+A M G K ++ T+ +
Sbjct: 330 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 389
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C V + D A+ + ++ + ++P++ +Y +++ G ++ A L + G
Sbjct: 390 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 449
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ + ++N + L +N D A+ + + + D ++N +I G + GRM +
Sbjct: 450 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI-GALLKCGRMDEA 508
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+DL +G D YS + + E+G++E +
Sbjct: 509 KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEEL 543
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 173/360 (48%), Gaps = 22/360 (6%)
Query: 126 ISKLIKAYGD--RGNVKAAIFWFHQAKQIENG---ACLYSYNSLLGVLVRVNSIKLAEEF 180
I L +A D R + AA+ +++ + G +++Y L+G R + L
Sbjct: 55 IYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAA 114
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK-VFDVMT---VKPNLLAYNTMINGF 236
+VK+ D T+T +++G C +A V MT P++ +YN ++ G
Sbjct: 115 LGNVVKKGF-RVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGL 173
Query: 237 CKKGELEEAKKCMNEMMNR---GCRPNELTYNAMIYGLCING--------RVDEAKMLMA 285
C + +EA + ++ M + G P+ ++YN ++ G G +D+A ++
Sbjct: 174 CDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLN 233
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
M NG + T+ S+L G C G+ +A+G L+ + + P+V +Y ++N CK G
Sbjct: 234 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNG 293
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+S EA + M RGL+P + ++ + + + G + + L M ++ P+ ++YN
Sbjct: 294 RSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYN 353
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
T+I G C+A G+M + L+ M+ G D Y L+ GYC +++ + + EMV+
Sbjct: 354 TLIDGCCLA-GKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 412
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 146/318 (45%), Gaps = 39/318 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++ Y G K AI + + + +Y+SL+ L + A + F + K
Sbjct: 250 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 309
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------------------- 221
+ PD++TY T+++G+CK G + ++K+FD+M
Sbjct: 310 L-EPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 368
Query: 222 -----------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
VKP+++ Y T+ING+C+ +++A EM++ G PN +TYN ++ G
Sbjct: 369 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 428
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
L R AK L + +G + +ST+ +L GLC D+A+ +N+ ++ +
Sbjct: 429 LFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 488
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+++ ++I K G+ DEA L A GL P V +++ + L+E G L+ L
Sbjct: 489 TRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFL 548
Query: 391 QMPQMDCLPNFVSYNTII 408
M + C + N+I+
Sbjct: 549 SMEENGCSADSRMLNSIV 566
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 29/242 (11%)
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM----------LMAKMRLNGF 292
E+A+ +E++ RG A IYGL D A+ MA+
Sbjct: 37 EDARHVFDELLRRG-------RGASIYGLN-RALADVARHSPAAAVSRYNRMARAGAGKV 88
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
V T+ ++ C G+ D L NV++ D ++ ++ G C ++ +A+
Sbjct: 89 TPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMD 148
Query: 353 L-LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ---MDCLPNFVSYNTII 408
+ L+ M G P VFS+N + + L + A+ LL M P+ VSYNT++
Sbjct: 149 IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208
Query: 409 CGLC-------MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
G + M ++++ M+++G D Y+ +L GYC G + +
Sbjct: 209 NGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLK 268
Query: 462 EM 463
+M
Sbjct: 269 KM 270
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 4/194 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y + A+ F + + +YN +L L A+E + I K
Sbjct: 390 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 449
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
++STY ++ G CK + + A ++F + ++ +N MI K G ++EA
Sbjct: 450 T-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 508
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K G P+ TY+ M L G ++E L M NG + S+++
Sbjct: 509 KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRK 568
Query: 306 LCVVGKFDQAVGYL 319
L G +A YL
Sbjct: 569 LLQRGDITRAGTYL 582
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
PTV ++ + G LD L + + + +++ ++ GLC K R D D
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADK-RTSDAMD 148
Query: 424 LV-DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+V RM G D Y+ LLKG C+E + +++ H M +G
Sbjct: 149 IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRG 194
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 4/155 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN +L L + N A F + ++ + T+ MI K G ++ AK +F
Sbjct: 454 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDL-QLETRTFNIMIGALLKCGRMDEAKDLF 512
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ P++ Y+ M ++G LEE M GC + N+++ L
Sbjct: 513 AAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQR 572
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
G + A + + F ST +L+ +V
Sbjct: 573 GDITRAGTYLFMIDEKHFSLEASTASFLLESSPIV 607
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 227/477 (47%), Gaps = 26/477 (5%)
Query: 4 PRRSLTNISQIPDQ-SILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVI 62
PR+ S +P + + LV+ + +++ Q+ + S + S++ VI
Sbjct: 11 PRQHPKGSSSLPPRINYLVSDVIRILKTHQWQDSLESRFAE------SKVVVSDVAHFVI 64
Query: 63 YEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSN--- 119
+ AL FF+WAS P ++++ +L S + +L+N
Sbjct: 65 DRVHDAELALKFFDWAST---RPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQH 121
Query: 120 -KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIK 175
K + S LI AYG+ G++ A+ FH +++ N CL + NSLL LV+ +
Sbjct: 122 LKPTREAFSALILAYGESGSLDRALQLFHTVREMHN--CLPTVVASNSLLNGLVKSGKVD 179
Query: 176 LAEEFFHQIVK-ENVVPPDVSTYTT--MIRGYCKMGMIENAKKVFDVMTVK---PNLLAY 229
+A + + ++++ ++ V YTT +++G C +G IE +++ K P+++ Y
Sbjct: 180 VALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFY 239
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +I+G+CKKG+L+ A + + E+ +G P TY A+I G C G + L+ +M
Sbjct: 240 NMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAA 299
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G NV +++ G +A +R + E PD+ +Y +IN CK G+ E
Sbjct: 300 RGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKE 359
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A L++ + RGL P FS+ + + G+ +A +L ++ ++ P+ VSY I
Sbjct: 360 ADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIH 419
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G+ + G + + ++M+ G D +Y+ L+ G C+ G + + EM+ +
Sbjct: 420 GV-VVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDR 475
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 166/339 (48%), Gaps = 5/339 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I A G V A + ++ G + +YN+++ + IK A+EF + KE
Sbjct: 312 VIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEK-AKER 370
Query: 189 VVPPDVSTYTTMIRGYCKMG-MIENAKKVFDVMTV--KPNLLAYNTMINGFCKKGELEEA 245
+ P+ +YT ++ YCK G ++ A +F + + KP+L++Y I+G GE++ A
Sbjct: 371 GLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVA 430
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+MM +G P+ YN ++ GLC NGR K+L+++M + +V +++ G
Sbjct: 431 LMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDG 490
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
G+ D+A+ + ++ ++P + Y +I GFCK GK +A+S L +M+ P
Sbjct: 491 FIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPD 550
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++++ V V+ ++ A+ + QM + PN ++Y ++I G C K M E +
Sbjct: 551 EYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFC-KKADMIRAEKVF 609
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M + Y+ L+ G+ + G E I M+
Sbjct: 610 RGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELML 648
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 168/346 (48%), Gaps = 5/346 (1%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
F + +I Y +G+++ A + K + +Y +L+ + + ++ ++
Sbjct: 238 FYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEM 297
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
+ +V + +I K G++ A + M P++ YNTMIN CK G
Sbjct: 298 AARGL-NMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGR 356
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++EA + + + RG PN+ +Y +++ C G +A ++ ++ G K ++ ++ +
Sbjct: 357 IKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGA 416
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+ G+ V G+ D A+ +ME + PD + Y V+++G CK G+ LL EM R
Sbjct: 417 FIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRN 476
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
++P V+ F + + NGELD AI + K + + P V YN +I G C G+M D
Sbjct: 477 VQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKF-GKMTDA 535
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+++M H D YS ++ GY ++ ++ + +++ +M+ K
Sbjct: 536 LSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHK 581
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 150/308 (48%), Gaps = 19/308 (6%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN L+ L + + +++ NV PDV + T++ G+ + G ++ A K+F V+
Sbjct: 449 YNVLMSGLCKNGRFPAMKLLLSEMLDRNV-QPDVYVFATLMDGFIRNGELDEAIKIFKVI 507
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V P ++ YN MI GFCK G++ +A C+N+M N P+E TY+ +I G +
Sbjct: 508 IRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDM 567
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A + +M + FK NV T+ S++ G C +A R + ++ P+V +Y +
Sbjct: 568 SSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTL 627
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFN---------AVFRILVENG---ELDRA 385
+ GF K GK ++A S+ + M G P +F+ A +L+E E +R+
Sbjct: 628 VGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERS 687
Query: 386 ILL--LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
++L M +YN++I LC G + + L+ +M+ G +D ++ +
Sbjct: 688 LILDFFTMMLSEGWDQVIAAYNSVIVCLC-KHGMVDTAQLLLTKMLTKGFLIDSVCFTAM 746
Query: 444 LKGYCEEG 451
L G C +G
Sbjct: 747 LHGLCHKG 754
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 65/292 (22%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IK + G + A+ ++ K + + Y+Y++++ V+ + + A + F Q++K
Sbjct: 522 MIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHK 581
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P+V TYT++I G+CK + A+KVF M + PN++ Y T++ GF K G+ E+A
Sbjct: 582 F-KPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKA 640
Query: 246 KKCMNEMMNRGCRPNELT------------------------------------------ 263
M+ GC PN+ T
Sbjct: 641 TSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEG 700
Query: 264 -------YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
YN++I LC +G VD A++L+ KM GF + +ML GLC GK +
Sbjct: 701 WDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKE-- 758
Query: 317 GYLRNVMEANMNP----DVKSYEVVINGFCKIGKSDEAI----SLLKEMRAR 360
RN++ ++N Y + ++ + G+ EA +L++E R R
Sbjct: 759 --WRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLIEEDRVR 808
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLI 130
AL N N + P++Y ++T + +S +L + ++K+ K + + LI
Sbjct: 535 ALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSAL-KMFGQMMKHKFKPNVITYTSLI 593
Query: 131 KAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVV 190
+ + ++ A F K + + +Y +L+G + + A F +++ N
Sbjct: 594 NGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIF-ELMLMNGC 652
Query: 191 PPDVSTYTTMIRGYCKMGM----------IENAKK-VFDVMTVKPN------LLAYNTMI 233
PP+ +T+ +I G +EN + + D T+ + + AYN++I
Sbjct: 653 PPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVI 712
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
CK G ++ A+ + +M+ +G + + + AM++GLC G+ E + +++
Sbjct: 713 VCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIIS 764
>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 484
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 211/428 (49%), Gaps = 25/428 (5%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSN----LFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNTITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNP 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL--PNFV--- 402
D A +LK M + + + + G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAMIRLSVPTEAGHYGXLIXNFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHL 367
Query: 403 ---SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+YN +I LC G+ E LV ++ + G D T + L++G+ +EG+ ++ ++
Sbjct: 368 EPSAYNPMIEYLC-NNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDSAFEL 425
Query: 460 AHEMVTKK 467
M+ +K
Sbjct: 426 LKIMLRRK 433
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 150/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNTITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN + + M+
Sbjct: 301 HCKSGNPDAAADVLKAMI 318
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q+ K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 169/348 (48%), Gaps = 40/348 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+ + ++ R + LA +I+K P+ T++T+I G C G + A ++
Sbjct: 221 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGY-EPNTITFSTLINGLCLEGRVSEALELV 279
Query: 218 DVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA-------- 266
D M KP+L+ NT++NG C G+ EA +++M+ GC+PN +TY
Sbjct: 280 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 339
Query: 267 ---------------------------MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+I GLC +G +D A L +M + G N+ T+
Sbjct: 340 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 399
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ G C G++D LR++++ +NP+V ++ V+I+ F K GK EA L KEM
Sbjct: 400 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 459
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RG+ P ++ ++ + LD+A ++ M C PN ++N +I G C A R+
Sbjct: 460 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN-RID 518
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D +L +M G D Y+ L++G+CE G + ++ EMV++K
Sbjct: 519 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 566
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 149/280 (53%), Gaps = 5/280 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+++ L+ V+ ++ AEE +++ + P D TYT++I G+CK ++ A ++ D+
Sbjct: 433 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAP-DTITYTSLIDGFCKENHLDKANQMVDL 491
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN+ +N +ING+CK +++ + +M RG + +TYN +I G C G+
Sbjct: 492 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 551
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ AK L +M N+ T+K +L GLC G+ ++A+ + ++ M D+ Y +
Sbjct: 552 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 611
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C K D+A L + +G+KP V ++N + L + G L A LL ++M +
Sbjct: 612 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 671
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
P+ +YN +I + G L++ + R G ++D
Sbjct: 672 HAPDGWTYNILIRAH-LGDGDATKSVKLIEELKRCGFSVD 710
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 155/330 (46%), Gaps = 40/330 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L V+ + LA E ++ + N+ D Y+ +I G CK G ++NA +F+
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKMEERNI-KLDAVKYSIIIDGLCKHGSLDNAFNLFNE 386
Query: 220 MTVK---PNLLAYNTMINGFC-----------------------------------KKGE 241
M +K N++ YN +I GFC K+G+
Sbjct: 387 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 446
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L EA++ EM++RG P+ +TY ++I G C +D+A ++ M G N+ T
Sbjct: 447 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 506
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C + D + R + + D +Y +I GFC++GK + A L +EM +R
Sbjct: 507 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 566
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P + ++ + L +NGE ++A+ + +++ + + YN II G+C A ++ D
Sbjct: 567 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA-SKVDDA 625
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
DL + G Y+ ++ G C++G
Sbjct: 626 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 655
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 178/374 (47%), Gaps = 14/374 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
+ A+ D L H L SI L N D +I ++ G G ++ F A+ + N
Sbjct: 99 FVAVAD--LRHILTSIGEKLEPNE---FDEWIKEV--DVGSDGKIRYEDF---IARMVAN 148
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPP--DVSTYTTMIRGYCKMGMIEN 212
L L LV + + A + F ++ +P D S + I + ++
Sbjct: 149 DRNLSYRERLRSGLVDIKADD-AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLA 207
Query: 213 AKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
K ++ + NL + MIN FC+ +L A M +++ G PN +T++ +I GLC
Sbjct: 208 LCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC 267
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+ GRV EA L+ +M G K ++ T +++ GLC+ GK +A+ + ++E P+
Sbjct: 268 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 327
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y V+N CK G++ A+ LL++M R +K ++ + L ++G LD A L +M
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
N ++YN +I G C A GR D L+ MI+ N + +S L+ + +EG
Sbjct: 388 EMKGITTNIITYNILIGGFCNA-GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 446
Query: 453 VENVMQIAHEMVTK 466
+ ++ EM+ +
Sbjct: 447 LREAEELHKEMIHR 460
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 112/225 (49%), Gaps = 4/225 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N L+ + N I E F ++ VV D TY T+I+G+C++G + AK++F
Sbjct: 501 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGKLNVAKELF 559
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V PN++ Y +++G C GE E+A + ++ + YN +I+G+C
Sbjct: 560 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 619
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+VD+A L + L G K V T+ M+ GLC G +A R + E PD +Y
Sbjct: 620 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 679
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
++I G + +++ L++E++ G + V +L ++
Sbjct: 680 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDD 724
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 178/407 (43%), Gaps = 38/407 (9%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
Y A+ + + A L + + + + L+K D + ++ + K++
Sbjct: 202 YAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGW 261
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP----------------------- 191
+Y +L+ + R + AE+ +++ +VP
Sbjct: 262 RPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVR 321
Query: 192 -----------PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
P+V TY M++G+C +G + A + D M V+P+++ YN +I G C
Sbjct: 322 VFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQC 381
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G +E A + + M G ++ TYN +I LC G+VDEA L + G + N
Sbjct: 382 IDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSV 441
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T +++ GLC GKFD A +L ++ A PD +Y I CK S E +S + EM
Sbjct: 442 TFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEM 501
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ +KP+ ++ V L + A + QM + C P+ V+Y T + C +GR
Sbjct: 502 LQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYC-NEGR 560
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ + E++V M + G +D Y+ L+ G+ G ++ + I M
Sbjct: 561 LHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMT 607
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 192/412 (46%), Gaps = 59/412 (14%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE--FFHQI 184
+ LI+ + + G V A+ F + +Q + +Y++ +L+ L + EE + Q
Sbjct: 203 AALIEGFCETGRVDEALELFRELEQPD----MYTHAALVKGLC---DARRGEEGLYMLQK 255
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGE 241
+KE P Y ++ +C+ E A+K+ + M + P + ++N +C++G
Sbjct: 256 MKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGR 315
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ A + M +GC PN TYNAM+ G C G+V +A L+ +MR G + +V T+
Sbjct: 316 MSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNL 375
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++G C+ G + A LR +ME N + D +Y V+I+ CK GK DEA SL + R
Sbjct: 376 LIRGQCIDGHIESAFRLLR-LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR 434
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR--- 417
G++P +FN V L + G+ D A L++M C P+ +Y+ I LC KG
Sbjct: 435 GIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREG 494
Query: 418 --------MQDVED-------LVDR----------------MIRSGHNLDFTMYSCLLKG 446
+DV+ ++DR M+ G + D Y+ ++
Sbjct: 495 LSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRA 554
Query: 447 YCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISR 498
YC EG + + EM KKG + +VDA+ ++ G + I +
Sbjct: 555 YCNEGRLHEAENVVMEM--KKGGI---------IVDAMAYNTLIDGHTSIGK 595
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 152/303 (50%), Gaps = 8/303 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ SLL R L F + P +TY +IR C+ + +A++ +
Sbjct: 95 TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +P+ +N++I G+C+ +L+ A+ ++M RG + ++Y A+I G C GR
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA L ++ + ++ TH +++KGLC + ++ + L+ + E P ++Y
Sbjct: 215 VDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++ +C+ K++EA +L EM GL P + AV G + A+ + + M
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C PN +YN ++ G C G++ L+D+M G D Y+ L++G C +G++E+
Sbjct: 331 CEPNVWTYNAMVQGFCNV-GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESA 389
Query: 457 MQI 459
++
Sbjct: 390 FRL 392
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 159/390 (40%), Gaps = 54/390 (13%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ ++ AY G + A+ F K +++YN+++ V + A Q+ +
Sbjct: 304 TAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM-R 362
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT------------------------- 221
E V PDV TY +IRG C G IE+A ++ +M
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422
Query: 222 -------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
++PN + +NT+ING CK G+ + A + +M++ GC P+ TY+ I
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFI 482
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
LC E + +M K + + ++ L + A ++ +
Sbjct: 483 ENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCS 542
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PDV +Y + +C G+ EA +++ EM+ G+ ++N + G+ D A+ +
Sbjct: 543 PDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTI 602
Query: 389 LKQMPQMDCLPNFVSY--------------NTIICGLCMAKG-RMQDVEDLVDRMIRSGH 433
LK M + +PN ++ + + + K + DV +L + M ++
Sbjct: 603 LKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSV 662
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y +L+G+ EE ++ V + M
Sbjct: 663 PSSARAYLAILEGFSEERRLDEVTSLVSHM 692
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 150/367 (40%), Gaps = 51/367 (13%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
FI L K G R + + + Q + +Y ++ L + + LA + Q+
Sbjct: 481 FIENLCKTKGSREGLS----FIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQM 536
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP-----NLLAYNTMINGFCKK 239
V P DV TYTT +R YC G + A+ V VM +K + +AYNT+I+G
Sbjct: 537 VSLGCSP-DVVTYTTSVRAYCNEGRLHEAENV--VMEMKKGGIIVDAMAYNTLIDGHTSI 593
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM----------------L 283
G+ + A + M PN T+ ++ L ++ + L
Sbjct: 594 GKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFEL 653
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M+ N + + ++L+G + D+ + ++ E ++ + Y ++N FCK
Sbjct: 654 FELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCK 713
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+ +A +LL M G P + S+ + G+ DRA + + + +
Sbjct: 714 LRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGL-------RWKE 766
Query: 404 YNT--IICGLCMAKGRMQDVEDLVDRMIRSGH-NLDFTMYSCLLKGYCEEGNVENVMQIA 460
YNT I+ + ++D +IR GH ++ M S L + C+ + E +
Sbjct: 767 YNTDEIVWKI------------IIDGLIRQGHPDMCHDMISILEQMKCKPSD-ETYAMLT 813
Query: 461 HEMVTKK 467
E+ T++
Sbjct: 814 EELSTRE 820
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 167/343 (48%), Gaps = 8/343 (2%)
Query: 129 LIKAYGDRGNVKAAIFW-FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
L+K + G V+ A W F + L +YN ++ L + A E + + K+
Sbjct: 340 LVKGFCQAGRVQEA--WKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKD 397
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEE 244
PD T+ T+I G C+ G A +F+ V + ++ +Y++MING C G L +
Sbjct: 398 VACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVD 457
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A K +M GC+PN YNA+I G C R +A + +KM NG V T+ +++
Sbjct: 458 AVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLID 517
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC K+ +A R ++E PD+ +Y +I G K D+A+S+ K++ +GLK
Sbjct: 518 GLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKV 577
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQ-MDCLPNFVSYNTIICGLCMAKGRMQDVED 423
V N + L G++D A+ + M + +C PN V+YNT++ GL G +
Sbjct: 578 DVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGL-YETGYIDKAAT 636
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L + G D Y+ +KG C + +Q+ E++++
Sbjct: 637 LWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR 679
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 183/400 (45%), Gaps = 50/400 (12%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG++ A+ F ++ + +Y++L+ L + + + A + ++ + V PDV
Sbjct: 171 RGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGV-QPDVV 229
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
Y ++ G K G E +V+D + +PNL YN M++G CK G +E +
Sbjct: 230 CYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWER 289
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG- 310
M+ +P+ +TY +I+GLC +G VD A + +++ G + + + S++KG C G
Sbjct: 290 MVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGR 349
Query: 311 -----KFDQAVGY--LRNVMEANMN---------------------------PDVKSYEV 336
KF + G+ LRN+ N+ PD ++
Sbjct: 350 VQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGT 409
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C+ G +++A ++ +E R G + VFS++++ L G L A+ + ++M +
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C PN YN +I G C R D + +M +G + Y+ L+ G C+ +
Sbjct: 470 CKPNSHIYNALISGFCQVY-RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEA 528
Query: 457 MQIAHEMV--------TKKGRLLKLKNFLTRVVDALLLMW 488
+A EMV T G L++ F + +D L +W
Sbjct: 529 SSVAREMVENGFTPDITTYGSLIR-GLFSDKKIDDALSIW 567
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 159/352 (45%), Gaps = 46/352 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENV---VPPDVSTYTTMIRGYCKMGMIENAKKV 216
S+N+LL VR A+ FF + + P++ TY ++R C G ++ A +
Sbjct: 121 SHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTL 180
Query: 217 FDVMT--------------------------------------VKPNLLAYNTMINGFCK 238
FD + V+P+++ YN ++ G K
Sbjct: 181 FDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFK 240
Query: 239 KGELEEAKKCMNEMM-NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
GE E+ + ++++ + G RPN TYN M+ GLC GR E + +M N + +V
Sbjct: 241 AGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVI 300
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++ GLC G D A +++ + D Y ++ GFC+ G+ EA
Sbjct: 301 TYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA 360
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ-MDCLPNFVSYNTIICGLCMAKG 416
GL+ + ++N + + L ++G +D AI L + + + C+P+ V++ T+I GLC G
Sbjct: 361 GFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQ-NG 418
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ + SG LD YS ++ G C G + + +++ +E + K G
Sbjct: 419 FANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV-YEKMDKDG 469
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 141/284 (49%), Gaps = 5/284 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G A F +A+ ++SY+S++ L V + A + + ++ K+
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P+ Y +I G+C++ +A +++ M P ++ YNT+I+G CK + +EA
Sbjct: 470 C-KPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEA 528
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
EM+ G P+ TY ++I GL + ++D+A + ++ G K +V H ++ G
Sbjct: 529 SSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHG 588
Query: 306 LCVVGKFDQAVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
LC GK D+A+ ++ E N P++ +Y +++G + G D+A +L + GL+P
Sbjct: 589 LCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEP 648
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+ S+N + L + I LL ++ +P +++N ++
Sbjct: 649 DIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 138/276 (50%), Gaps = 10/276 (3%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT-------VKPNLLAYNTMINGFCKKGELEE 244
P + ++ ++ + + +A F ++ + PNL YN ++ C +G+L+
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDR 176
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + + R P+ +TY+ ++ GL R+D A L+ +M +G + +V + ++L
Sbjct: 177 AVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLG 236
Query: 305 GLCVVGKFDQAVG-YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G G+F++ + + + V + P++ +Y V+++G CK G+ E + + M A L+
Sbjct: 237 GCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++ + L +G++D A + ++ + + + YN+++ G C A GR+Q+
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQA-GRVQEAWK 355
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
D +G + Y+ ++KG + G V+ +++
Sbjct: 356 FWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIEL 390
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF----KDNVSTHKSMLKGLCVVGK 311
GC P ++NA++ R +A A + F N+ T+ +L+ LC G
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+AV ++ + PD +Y ++ G K + D A+ LL EM G++P V +NA
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233
Query: 372 VFRILVENGELDRAILLLKQM-PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ + GE ++ + + ++ PN +YN ++ GLC GR ++V ++ +RM+
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKF-GRFKEVGEVWERMVA 292
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ D Y L+ G C G+V+ ++ E++
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMR----ARGLKPTVFSFNAVFRILVENGELD 383
NP ++S+ +++ F + + +A + + R + P + ++N V R L G+LD
Sbjct: 116 NPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLD 175
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
RA+ L + + P+ ++Y+T++CGL + R+ DL+D M RSG D Y+ L
Sbjct: 176 RAVTLFDSLRRRQVAPDCITYSTLMCGLA-KQDRLDHALDLLDEMPRSGVQPDVVCYNAL 234
Query: 444 LKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
L G + G E VM++ ++V G L +
Sbjct: 235 LGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 187/351 (53%), Gaps = 12/351 (3%)
Query: 119 NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAE 178
+KL+ IS L G G V+ A+ F++A++ G +Y+Y++++ R + A
Sbjct: 199 SKLASIMISTL----GRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREAL 254
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGM-IENAKKVFDVMT---VKPNLLAYNTMIN 234
+ F Q +K+ P++ TY T+I K G+ ++ A +F+ M V+P+ + +N++I
Sbjct: 255 KVF-QAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLI- 312
Query: 235 GFCKKGEL-EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
C +G L E++++ EM RG + TYN +I +C G+++ A +M+ MRL
Sbjct: 313 AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNIS 372
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
NV T+ +M+ G +G F++A+G ++ E+ + PD SY +I+ + K+G+ D+A++
Sbjct: 373 PNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTA 432
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
K+M GLK V ++NA+ + G+ A L +M +PN ++Y+ +I
Sbjct: 433 CKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSK 492
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
A G QD + R+G D +YS L+ C+ G VE+ + + EM
Sbjct: 493 A-GMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMT 542
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 134/252 (53%), Gaps = 4/252 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++NSL+ V R + + ++ F ++ + + D+ TY T+I CK G +E A +
Sbjct: 307 TFNSLIAVCSRGSLWEDSQRVFAEMQRRGI-EQDIFTYNTLIDAVCKGGQMELAASIMSS 365
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +K PN++ Y+TMI+G+ K G EEA ++M G RP+ ++YN +I GR
Sbjct: 366 MRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGR 425
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D+A M G K +V T+ +++ GK+ A G + + P+V +Y
Sbjct: 426 FDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSA 485
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ + K G +A S+ E + GLKP V ++++ + G ++ A++LL++M Q
Sbjct: 486 LIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAG 545
Query: 397 CLPNFVSYNTII 408
PN V+YN++I
Sbjct: 546 IQPNIVTYNSLI 557
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 129/254 (50%), Gaps = 6/254 (2%)
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+F Q + IE +++YN+L+ + + ++LA + +N+ P+V TY+TMI
Sbjct: 327 VFAEMQRRGIEQD--IFTYNTLIDAVCKGGQMELAASIMSSMRLKNI-SPNVVTYSTMID 383
Query: 203 GYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
GY K+G E A ++ M V+P+ ++YNT+I+ + K G ++A +M G +
Sbjct: 384 GYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKA 443
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TYNA+I G+ +A L KM+ G NV T+ +++ G A
Sbjct: 444 DVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIF 503
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
A + PDV Y +I+ CK G ++A+ LL+EM G++P + ++N++ N
Sbjct: 504 VEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRN 563
Query: 380 GELDRAILLLKQMP 393
G++D MP
Sbjct: 564 GQVDNVEAAKGNMP 577
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 154/334 (46%), Gaps = 27/334 (8%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDF-----FISKLIKAYGDRGNVKAAIFWFHQA 149
Y + D + + +AAS++ +S +L + S +I YG G + AI +H
Sbjct: 343 YNTLIDAVCKGGQMELAASIM-SSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDM 401
Query: 150 KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
K+ SYN+L+ + ++ A + + + DV TY +I Y K G
Sbjct: 402 KESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGL-KADVVTYNALIDAYGKQGK 460
Query: 210 IENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
++A +FD M + PN+L Y+ +I+ + K G ++A E G +P+ + Y++
Sbjct: 461 YKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSS 520
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I C G V++A +L+ +M G + N+ T+ S++ G+ D V + M N
Sbjct: 521 LIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDN-VEAAKGNMPIN 579
Query: 327 MNPDV--KSYEVVINGFCKIGKSDE----------AISLLKEMRARGLKPTVFSFNAVFR 374
+ V +S E++ CK S + A+S+ EM+ GLKP V +F+A+
Sbjct: 580 VFNKVGDRSTEII----CKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILN 635
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
L A +LL+QM D +++ ++
Sbjct: 636 ACSRCSSLQEASVLLEQMRFFDSWVYGIAHGLLM 669
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 159/309 (51%), Gaps = 5/309 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+ N L+ + + L +++K + P + T+TT+I G CK G A ++FD
Sbjct: 128 TLNILINCFCLMQHVDLGFSVLAKVIKLGL-QPTIITFTTLINGLCKAGEFAQALELFDD 186
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P++ Y T+ING CK GE A + +M GC+P+ +TY+ +I LC +
Sbjct: 187 MVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRL 246
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+EA + + M+ G V ++ S+++GLC ++ +A L + N+ PD+ ++ +
Sbjct: 247 VNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSL 306
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ FCK G EA +LK M G++P V ++N++ E+ A L M
Sbjct: 307 LIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRG 366
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C P+ SY+ +I G CM K R+ + + L + MI G + Y+ L+ +C+ G +
Sbjct: 367 CKPDVFSYSILINGYCMVK-RIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREA 425
Query: 457 MQIAHEMVT 465
++ +M T
Sbjct: 426 RELFKDMHT 434
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 136/257 (52%), Gaps = 4/257 (1%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKK 239
+ + E V P+V TY +++ GY + A+K+FDVM KP++ +Y+ +ING+C
Sbjct: 325 KTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMV 384
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
++EAK+ NEM+++G PN ++Y +I+ C G++ EA+ L M NG+ ++ T+
Sbjct: 385 KRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTY 444
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+L+G C G +A R + + P++ Y ++I+ CK G + A L E+
Sbjct: 445 SVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFV 504
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
GL+P V + + L + G LD A+ ++M + C PN SYN II G K +
Sbjct: 505 HGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESR 564
Query: 420 DVEDLVDRMIRSGHNLD 436
V+ L+ M G D
Sbjct: 565 AVQ-LIGEMRDKGFVAD 580
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 166/340 (48%), Gaps = 5/340 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I G AA + ++ + +Y++L+ L + + A + F +K
Sbjct: 200 TTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIF-SYMK 258
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ P V +YT++I+G C + A + + MT + P+++ ++ +I+ FCK+G +
Sbjct: 259 AKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVL 318
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ + M G PN +TYN++++G + V EA+ L M G K +V ++ ++
Sbjct: 319 EAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILI 378
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C+V + D+A ++ + P+ SY +I+ FC++GK EA L K+M G
Sbjct: 379 NGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYL 438
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + +++ + + G L +A L + M PN V Y +I +C + G +
Sbjct: 439 PDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKS-GNLNHARK 497
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L + G D +Y+ ++ G C+EG ++ ++ +M
Sbjct: 498 LFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKM 537
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 40/287 (13%)
Query: 215 KVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
K ++ + PN N +IN FC ++ + +++ G +P +T+ +I GLC
Sbjct: 115 KQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKA 174
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +A L M G + +V T+ +++ GLC +G+ A G ++ + E PDV +Y
Sbjct: 175 GEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTY 234
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR-------------------- 374
+I+ CK +EA+ + M+A+G+ PTV S+ ++ +
Sbjct: 235 STLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTS 294
Query: 375 ---------------ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
I + G + A +LK M +M PN ++YN+++ G + +M+
Sbjct: 295 LNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSL---QME 351
Query: 420 DVE--DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
VE L D MI G D YS L+ GYC ++ Q+ +EM+
Sbjct: 352 VVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMI 398
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLC-INGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+++A N M++R P + +N ++ + + D L +M L G N T
Sbjct: 71 IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ C++ D L V++ + P + ++ +ING CK G+ +A+ L +M AR
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM-Q 419
G +P V+++ + L + GE A L+K+M ++ C P+ V+Y+T+I LC K R+
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLC--KDRLVN 248
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ D+ M G + Y+ L++G C + + +EM +
Sbjct: 249 EALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTS 294
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L++ + +G + A F + L Y L+ + + ++ A + F ++
Sbjct: 445 SVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFV 504
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ PDV YTT+I G CK G+++ A + F M PN +YN +I GF + +
Sbjct: 505 HGL-QPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDES 563
Query: 244 EAKKCMNEMMNRGCRPNELT 263
A + + EM ++G +E T
Sbjct: 564 RAVQLIGEMRDKGFVADEGT 583
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 166/294 (56%), Gaps = 5/294 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ L + ++ A + + +++ + + PDV T+ ++I G+C +G ++ A +F M
Sbjct: 202 YNIIINSLCKDKAVSDAYQLYSEMITKRI-SPDVVTFNSLILGFCVVGQLKEAFGLFHEM 260
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+K P++ ++ +++ CK G + AK + MM +G P+ +TY++++ G C+ V
Sbjct: 261 VLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEV 320
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
++AK + + M G + ++ M+ GL + D+A+ + + + PD +Y +
Sbjct: 321 NKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSL 380
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G CK+G+ A L+ EM G+ + ++N++ +L +N +D+AI L+K++
Sbjct: 381 IDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGI 440
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
P+ +YN +I GLC GR+++ +D+ ++ G++++ Y+ ++ G C+EG
Sbjct: 441 QPSMYTYNILIDGLCKG-GRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEG 493
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 162/309 (52%), Gaps = 5/309 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI + G +K A FH+ +Y+++ L+ L + +I A+ ++K
Sbjct: 238 NSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMK 297
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ V+P DV TY++++ GYC + + AK VF M+ V P+ +YN MING K ++
Sbjct: 298 QGVIP-DVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVD 356
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA EM +G P+ +TYN++I GLC GR+ A L+ +M NG ++ T+ S++
Sbjct: 357 EALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLI 416
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC D+A+ ++ + + + P + +Y ++I+G CK G+ A + +++ +G
Sbjct: 417 DVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYS 476
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+++N + L + G + A +LL +M +P+ V+Y TII L K + E
Sbjct: 477 VNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL-FRKDENEKAEK 535
Query: 424 LVDRMIRSG 432
L+ MI G
Sbjct: 536 LLREMIIRG 544
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 164/338 (48%), Gaps = 5/338 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G + A F + ++ ++N+L+ + +K A F ++
Sbjct: 100 LVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALG 159
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
VS Y T+I G CK+G A ++ + V +++ YN +IN CK + +A
Sbjct: 160 FHLDQVS-YRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDA 218
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +EM+ + P+ +T+N++I G C+ G++ EA L +M L +V T ++
Sbjct: 219 YQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDA 278
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G +A L +M+ + PDV +Y +++G+C + + ++A + M G+ P
Sbjct: 279 LCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPH 338
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
S+N + L + +D A+ L K+M P+ V+YN++I GLC GR+ LV
Sbjct: 339 AHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKL-GRISYAWQLV 397
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D M +G D Y+ L+ C+ +++ + + ++
Sbjct: 398 DEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKI 435
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 141/303 (46%), Gaps = 32/303 (10%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
FH+ ++ + +N +LG +V+ N+ + YTT I
Sbjct: 45 FHRMLRMRPTPSIVEFNKILGSIVKANN---------------------NHYTTAI---- 79
Query: 206 KMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+ ++ + P ++ +N ++N +C GE+ A +++ G P +T+N
Sbjct: 80 ------SLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFN 133
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+I G+C+NG++ EA + GF + ++++++ GLC +G+ A+ L+ +
Sbjct: 134 TLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGK 193
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+N DV Y ++IN CK +A L EM + + P V +FN++ G+L A
Sbjct: 194 LVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEA 253
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L +M + P+ +++ ++ LC G + ++++ M++ G D YS L+
Sbjct: 254 FGLFHEMVLKNINPDVYTFSILVDALC-KDGNITRAKNMLAVMMKQGVIPDVVTYSSLMD 312
Query: 446 GYC 448
GYC
Sbjct: 313 GYC 315
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 123/239 (51%), Gaps = 4/239 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ Y V A F ++ +SYN ++ L ++ + A F ++
Sbjct: 308 SSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCC 367
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ + P D TY ++I G CK+G I A ++ D M + ++L YN++I+ CK ++
Sbjct: 368 KGIAP-DTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHID 426
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + ++ ++G +P+ TYN +I GLC GR+ A+ + + + G+ N T+ M+
Sbjct: 427 KAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMI 486
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
GLC G F++A L + + PD +YE +I + ++++A LL+EM RGL
Sbjct: 487 NGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 133/333 (39%), Gaps = 73/333 (21%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCK--KGELEEAKKCMN 250
DVS++ M+R M P+++ +N ++ K A +
Sbjct: 41 DVSSFHRMLR-----------------MRPTPSIVEFNKILGSIVKANNNHYTTAISLSH 83
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
++ +G P +T+N ++ C G + A + AK+ G+ T +++ G+C+ G
Sbjct: 84 QLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNG 143
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
K +A+ + +V+ + D SY +ING CKIG++ A+ +LK++ + + V
Sbjct: 144 KLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDV---- 199
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
V YN II LC K + D L MI
Sbjct: 200 -------------------------------VMYNIIINSLCKDKA-VSDAYQLYSEMIT 227
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV------------------TKKGRLLK 472
+ D ++ L+ G+C G ++ + HEMV K G + +
Sbjct: 228 KRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITR 287
Query: 473 LKNFLTRVVDALLLMWIVTGGSWISRFVFVHQV 505
KN L ++ ++ +VT S + + V++V
Sbjct: 288 AKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEV 320
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 174/345 (50%), Gaps = 15/345 (4%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+S L +A G G A + K + +G ++Y+ L R + F +
Sbjct: 264 LLSGLCRA-GRMGETAAVLDEMASRKMVPDG---FTYSILFDGHSRTGDSQTMLSLFEES 319
Query: 185 VKENVVPPDVSTYT--TMIRGYCKMGMIENAKKVFDVMTVKPNLLA----YNTMINGFCK 238
VK+ V + YT ++ G CK G I A++V + V LL YNT+ING+C+
Sbjct: 320 VKKGV---KIGAYTCSILLNGLCKDGKISKAEEVLQTL-VNSGLLQTTVIYNTLINGYCQ 375
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G+LE A +M +R RP+ +TYNA+I GL R+ EA L+ +M NG +V T
Sbjct: 376 IGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVET 435
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+++ G+ ++ L ++ E + P+V SY ++N FCK GK EA+++L +M
Sbjct: 436 FNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMF 495
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+ + P +NA+ +E G D+A +L ++M P+ V+YN +I GLC + ++
Sbjct: 496 IKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLC-KQSQI 554
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ E+L+D + G D Y+ L+ C N + +++ EM
Sbjct: 555 SEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEM 599
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 141/283 (49%), Gaps = 4/283 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G+++ A F Q K +YN+L+ L +V I A + ++ K N
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEK-N 427
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V P V T+ T+I Y + G +E + M +KPN+++Y +++N FCK G++ EA
Sbjct: 428 GVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEA 487
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+++M + P YNA+I G D+A ML KM+ +G ++ T+ ++KG
Sbjct: 488 VAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKG 547
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + +A L ++ + PDV SY +I+ C +D A+ L KEM G+KP+
Sbjct: 548 LCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPS 607
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
++ +F L G + L +QM D +P YN ++
Sbjct: 608 PRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMV 650
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 157/343 (45%), Gaps = 40/343 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+SYN ++ L + + A + F ++ ++ VVP + TY TMI G+ K G +E+ +++
Sbjct: 189 FSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHI-TYNTMIDGHIKKGDLESGFRLWS 247
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M +KPN++ YN +++G C+ G + E ++EM +R P+ TY+ + G G
Sbjct: 248 QMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTG 307
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
L + G K T +L GLC GK +A L+ ++ + + Y
Sbjct: 308 DSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYN 367
Query: 336 VVINGFCKIGKSDEAISLLKEMRAR----------------------------------- 360
+ING+C+IG + A S+ ++M++R
Sbjct: 368 TLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKN 427
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+ P+V +FN + G+L++ ++L M + PN VSY +I+ C G++ +
Sbjct: 428 GVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFC-KNGKILE 486
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++D M +Y+ ++ Y E G+ + +A +M
Sbjct: 487 AVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKM 529
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 173/383 (45%), Gaps = 44/383 (11%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQA--KQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
F S L + G+ + + F ++ K ++ GA Y+ + LL L + I AEE
Sbjct: 294 FTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGA--YTCSILLNGLCKDGKISKAEEVL 351
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCK 238
+V ++ V Y T+I GYC++G +E A +F M ++P+ + YN +ING K
Sbjct: 352 QTLVNSGLLQTTV-IYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGK 410
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ EA + EM G P+ T+N +I G++++ ++++ M+ G K NV +
Sbjct: 411 VERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVS 470
Query: 299 HKSMLKGLCVVGKFDQAVG-----YLRNVM------------------------------ 323
+ S++ C GK +AV ++++V+
Sbjct: 471 YGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMK 530
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ + P + +Y ++I G CK + EA LL +R GL P V S+N + D
Sbjct: 531 SSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTD 590
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
RA+ L K+M + P+ +Y + L A GR+ ++E+L +M+ +Y+ +
Sbjct: 591 RALELEKEMWKCGIKPSPRTYRMLFSSLGGA-GRVHEMENLYQQMLDKDVVPCSGIYNIM 649
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+ Y + G V + EM K
Sbjct: 650 VDAYAKCGEESKVEALRKEMSDK 672
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 133/282 (47%), Gaps = 15/282 (5%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM----TVKPNLLAYNTMINGFCKKGELEEAKK 247
PD T+ ++ G ++ A + M PN +YN +I G K G +A K
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+EM + PN +TYN MI G G ++ L ++M +G K NV T+ +L GLC
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLC 269
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G+ + L + M PD +Y ++ +G + G S +SL +E +G+K +
Sbjct: 270 RAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA---KGRMQDVEDL 424
+ + + L ++G++ +A +L+ + L V YNT+I G C +G + +
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R+IR H Y+ L+ G G VE + + AH++V +
Sbjct: 390 KSRLIRPDH----ITYNALINGL---GKVERITE-AHDLVIE 423
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 110/237 (46%), Gaps = 4/237 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AYG G ++ ++ + SY S++ + I A + ++
Sbjct: 439 LIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKD 498
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V+P Y +I Y + G + A + + M V P+++ YN +I G CK+ ++ EA
Sbjct: 499 VLP-GAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEA 557
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ ++ + N G P+ ++YN +I C D A L +M G K + T++ +
Sbjct: 558 EELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSS 617
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
L G+ + + +++ ++ P Y ++++ + K G+ + +L KEM +G+
Sbjct: 618 LGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 119/290 (41%), Gaps = 48/290 (16%)
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF-KDNVSTHKSMLKGLCVVGKFDQAV 316
RP+ T+N + + G +DEA ++ +M +G N ++ ++ GL G AV
Sbjct: 149 RPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAV 208
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ E + P+ +Y +I+G K G + L +M GLKP V ++N + L
Sbjct: 209 KLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGL 268
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSY-------------------------------- 404
G + +L +M +P+ +Y
Sbjct: 269 CRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGA 328
Query: 405 ---NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
+ ++ GLC G++ E+++ ++ SG +Y+ L+ GYC+ G++E I
Sbjct: 329 YTCSILLNGLC-KDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQ 387
Query: 462 EMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVVIMER 511
+M K RL++ D + ++ G + R H +V+ ME+
Sbjct: 388 QM---KSRLIR--------PDHITYNALINGLGKVERITEAHDLVIEMEK 426
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL-KPTVFS 368
G+ G ++ A PD ++ + G DEA+ +L+ M G P FS
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N V L + G A+ L +MP+ +PN ++YNT+I G + KG ++ L +M
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGH-IKKGDLESGFRLWSQM 249
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+R G + Y+ LL G C G + + EM ++K
Sbjct: 250 LRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRK 288
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 167/343 (48%), Gaps = 38/343 (11%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENV-------------------------------- 189
NSLLG LV+V + LA E + ++V+ V
Sbjct: 66 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125
Query: 190 --VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEE 244
V PDV TY T+I YC+ G++E A ++ D M+ +KP + YN +ING CK G+
Sbjct: 126 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 185
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
AK ++EM+ G P+ TYN ++ C N + +A+ + +M G ++ + +++
Sbjct: 186 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 245
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
L G DQA+ Y R++ A + PD Y ++I GFC+ G EA+ + EM +G
Sbjct: 246 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 305
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
V ++N + L + L A L +M + P+F ++ T+I G G M L
Sbjct: 306 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYS-KDGNMNKAVTL 364
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ MI+ D Y+ L+ G+C+ +E V ++ ++M++++
Sbjct: 365 FEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 407
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 158/290 (54%), Gaps = 7/290 (2%)
Query: 148 QAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+ + +E G L +YN++L L + + A+E F ++ + V P D T+TT+I GY
Sbjct: 295 RDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP-DFYTFTTLINGYS 353
Query: 206 KMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
K G + A +F++M +KP+++ YNT+I+GFCK E+E+ + N+M++R PN +
Sbjct: 354 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHI 413
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
+Y +I G C G V EA L +M GF+ + T +++KG C G +A +L N+
Sbjct: 414 SYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 473
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ + PD +Y +INGF K D A +L+ +M GL P V ++N + G +
Sbjct: 474 LLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRM 533
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
A L++ +M + P+ +Y ++I G + + +++ + D M++ G
Sbjct: 534 QEAELIMLKMIERGVNPDRSTYTSLINGH-VTQNNLKEAFRVHDEMLQRG 582
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 163/341 (47%), Gaps = 5/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY +G ++ A C+++YN+++ L + A+ +++K
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 197
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+ PD +TY ++ C+ + +A+++FD M V P+L++++ +I K G L++A
Sbjct: 198 -MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 256
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K +M N G P+ + Y +I G C NG + EA + +M G +V T+ ++L G
Sbjct: 257 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNG 316
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +A + E + PD ++ +ING+ K G ++A++L + M R LKP
Sbjct: 317 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPD 376
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V ++N + + E+++ L M PN +SY +I G C G + + L
Sbjct: 377 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC-NMGCVSEAFRLW 435
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D M+ G + ++KGYC GN + M+ K
Sbjct: 436 DEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 476
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 168/380 (44%), Gaps = 75/380 (19%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN LL R +++ AE F ++ + VVP D+ +++ +I K G ++ A K F
Sbjct: 204 TYNILLVECCRNDNMMDAERIFDEMPSQGVVP-DLVSFSALIGLLSKNGCLDQALKYFRD 262
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+ + Y +I GFC+ G + EA K +EM+ +GC + +TYN ++ GLC
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L +M G + T +++ G G ++AV +++ N+ PDV +Y
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 382
Query: 337 VINGFCK-----------------------------------IGKSDEAISLLKEMRARG 361
+I+GFCK +G EA L EM +G
Sbjct: 383 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 442
Query: 362 LKPTVFSFNAVFRILVENG-----------------------------------ELDRAI 386
+ T+ + N + + G +DRA
Sbjct: 443 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 502
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+ +M LP+ ++YN I+ G +GRMQ+ E ++ +MI G N D + Y+ L+ G
Sbjct: 503 ALVNKMENSGLLPDVITYNVILNGFS-RQGRMQEAELIMLKMIERGVNPDRSTYTSLING 561
Query: 447 YCEEGNVENVMQIAHEMVTK 466
+ + N++ ++ EM+ +
Sbjct: 562 HVTQNNLKEAFRVHDEMLQR 581
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 8/277 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNK---LSDFF-ISKLIKAYGDRGNVKAAIFWFHQAK 150
Y I + L ++S A L + DF+ + LI Y GN+ A+ F
Sbjct: 310 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI 369
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
Q + +YN+L+ + + ++ E ++ ++ + P +S Y +I GYC MG +
Sbjct: 370 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS-YGILINGYCNMGCV 428
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A +++D M K ++ NT++ G+C+ G +A + ++ M+ +G P+ +TYN +
Sbjct: 429 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 488
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G +D A L+ KM +G +V T+ +L G G+ +A + ++E +
Sbjct: 489 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 548
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
NPD +Y +ING EA + EM RG P
Sbjct: 549 NPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 125/246 (50%), Gaps = 4/246 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
Y++ +L+ + ++ A F +++ N+ PDV TY T+I G+CK +E +++
Sbjct: 342 FYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL-KPDVVTYNTLIDGFCKGSEMEKVNELW 400
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + PN ++Y +ING+C G + EA + +EM+ +G +T N ++ G C
Sbjct: 401 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 460
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +A ++ M L G + T+ +++ G D+A + + + + PDV +Y
Sbjct: 461 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 520
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V++NGF + G+ EA ++ +M RG+ P ++ ++ V L A + +M Q
Sbjct: 521 NVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 580
Query: 395 MDCLPN 400
+P+
Sbjct: 581 RGFVPD 586
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 118/239 (49%), Gaps = 1/239 (0%)
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N L ++ ++ + + +L E + + ++G + N+++ GL G VD A +
Sbjct: 26 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
++ +G + NV T M+ LC K + +L ++ E + PDV +Y +IN +C+
Sbjct: 86 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G +EA L+ M +GLKP VF++NA+ L + G+ RA +L +M ++ P+ +Y
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
N ++ C M D E + D M G D +S L+ + G ++ ++ +M
Sbjct: 206 NILLVECC-RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 263
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 161/310 (51%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM---GMIENAKKV 216
S+N+ + N++ A F++++ + PP ++ +T ++ KM + +
Sbjct: 26 SHNTFHSKSLNFNTLDDALSSFNRMLHMHP-PPSIADFTKLLISITKMKHYSTVLSLSHQ 84
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
D + PN+ N +IN FC L A + +++ G +PN T+N +I GLC+ G+
Sbjct: 85 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 144
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ E L KM GF+ NV T+ +++ GLC VG A+ LR++ + N PDV Y
Sbjct: 145 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 204
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ CK + +A +L EM +G+ P++F++N++ L E LL +M
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 264
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+PN V ++T++ LC +G++ + D+VD MI+ G + Y+ L+ G+C ++
Sbjct: 265 IMPNVVIFSTVVDALC-KEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEA 323
Query: 457 MQIAHEMVTK 466
+++ MV K
Sbjct: 324 VKVFDTMVCK 333
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 173/344 (50%), Gaps = 11/344 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI G+ AAI + +E G C + Y S++ L + + A F +++
Sbjct: 170 LINGLCKVGSTSAAIRLL---RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 226
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ + P + TY ++I C + ++ + + M + PN++ ++T+++ CK+G++
Sbjct: 227 HQGI-SPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKV 285
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA ++ M+ RG PN +TYNA++ G C+ +DEA + M GF +V ++ ++
Sbjct: 286 MEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTL 345
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G C + + ++A+ + + P+ +Y +++G C +G+ +AI+L EM RG
Sbjct: 346 INGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQ 405
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P S+ + L +N LD AI LLK + + P+ Y +I G+C A G ++
Sbjct: 406 IPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA-GELEAAR 464
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
DL + G + + Y+ ++ G C++G + ++ EM K
Sbjct: 465 DLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK 508
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 172/350 (49%), Gaps = 7/350 (2%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
++DF +KL+ + + + HQ +Y+ N L+ + + A
Sbjct: 58 SIADF--TKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFS 115
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
+I+K P+++T+ T+IRG C G I +FD M +PN++ Y T+ING
Sbjct: 116 VLAKILKLGH-QPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGL 174
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
CK G A + + M C+P+ + Y ++I LC + +V +A L ++M G ++
Sbjct: 175 CKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSI 234
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ S++ LC + ++ L ++ + + P+V + V++ CK GK EA ++
Sbjct: 235 FTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDM 294
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M RG++P V ++NA+ E+D A+ + M P+ VSY+T+I G C +
Sbjct: 295 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQ- 353
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R++ L + M R + YS L+ G C G +++ + + HEMVT+
Sbjct: 354 RIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTR 403
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 165/307 (53%), Gaps = 5/307 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+++++ L + + A + ++K V P+V TY ++ G+C ++ A KVFD M
Sbjct: 272 FSTVVDALCKEGKVMEAHDVVDMMIKRGV-EPNVVTYNALMDGHCLRSEMDEAVKVFDTM 330
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K P++++Y+T+ING+CK +E+A EM + PN +TY+ +++GLC GR+
Sbjct: 331 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 390
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A L +M G + ++ +L LC + D+A+ L+ + +NM+PD++ Y +V
Sbjct: 391 QDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 450
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G C+ G+ + A L + ++GL P V+++ + L + G L A L +M +
Sbjct: 451 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 510
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +YN I G ++ ++ L+ M+ G + D + + L++ ++G ++V
Sbjct: 511 SPNGCTYNLITRGFLRNNETLRGIQ-LLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVK 569
Query: 458 QIAHEMV 464
QI E +
Sbjct: 570 QILSEFL 576
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 159/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YNSL+ L + K +++V ++P +V ++T++ CK G + A V
Sbjct: 234 IFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP-NVVIFSTVVDALCKEGKVMEAHDVV 292
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D+M V+PN++ YN +++G C + E++EA K + M+ +G P+ ++Y+ +I G C
Sbjct: 293 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 352
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+++A L +M N T+ +++ GLC VG+ A+ ++ PD SY
Sbjct: 353 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 412
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++ CK + DEAI+LLK + + P + + V + GEL+ A L +
Sbjct: 413 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 472
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN +Y +I GLC +G + + L M R G++ + Y+ + +G+
Sbjct: 473 KGLHPNVWTYTIMINGLC-QQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETL 531
Query: 455 NVMQIAHEMVTK 466
+Q+ EM+ +
Sbjct: 532 RGIQLLQEMLAR 543
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A+ ++ + P + + ++ K+ +SL +M + G+ P +++ N
Sbjct: 40 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L A +L ++ ++ PN ++NT+I GLC+ +G++ +V L D+MI
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCV-EGKIGEVLHLFDKMIGE 158
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
G + Y L+ G C+ G+ +++ M ++G T ++D+L
Sbjct: 159 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM--EQGNCQPDVVVYTSIIDSL 209
>gi|255660880|gb|ACU25609.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 484
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 216/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++ + G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 150/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YN
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNX 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN++ + M+
Sbjct: 301 HCKSGNLDAAADVLKAMI 318
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q+ K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVBSEKSAYNSLVQSXLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 204/444 (45%), Gaps = 13/444 (2%)
Query: 32 NPQNPSPKNIS-SQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHH 90
+P NP P++ + + P+ + L + +I Q N AL F +A PN + H
Sbjct: 37 SPNNPLPESYTVTPPIKPWPQRLYPKRLVSMITRQQNLDLALQIFEYAGKYQPN---FSH 93
Query: 91 TTPCYTAITDVLLSHSLIS----IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWF 146
Y +I L + + + L K+ K + +I+ YG G A+ F
Sbjct: 94 NYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFINVIRNYGLAGKPDFALRTF 153
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ + + S N+LL V+ L F + V P+V T +I+ CK
Sbjct: 154 IRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCK 213
Query: 207 MGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+E+A KV D M + PN++ Y T++ G+ +G++ A K E+ +RG P+ T
Sbjct: 214 KNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATT 273
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y ++ G C GR+ +A LM M NG + N T+ M++ C K +A L +++
Sbjct: 274 YTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDML 333
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
E P VI+ C+ GK +EA L K M + P + + L + G++
Sbjct: 334 ERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVW 393
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A L + + +P+ ++YNT+I G+C KG + + L D M+ G+ + Y+ L
Sbjct: 394 EARKLFGEF-ERGAIPSLLTYNTLIAGMC-EKGELSEAGKLWDDMMEKGYKPNAFTYNML 451
Query: 444 LKGYCEEGNVENVMQIAHEMVTKK 467
+KG+ + GN + ++I EM+ +
Sbjct: 452 IKGFSKIGNAKEGIRILEEMLDNR 475
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-- 221
++ VL I+ A E + +++K+N +P D + +T+I CK G + A+K+F
Sbjct: 347 VIDVLCEAGKIEEACELWKRMLKKNCMP-DNAIMSTLIHWLCKEGKVWEARKLFGEFERG 405
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
P+LL YNT+I G C+KGEL EA K ++MM +G +PN TYN +I G G E
Sbjct: 406 AIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGI 465
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
++ +M N N ST+ +++ LC +G + V + ++ A+ D S+++ +N
Sbjct: 466 RILEEMLDNRCMPNKSTYAILIEELCKMG-MEGEVDKVVSMAMASGGVDSDSWDLFLN 522
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 44/229 (19%)
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK------------------------ 206
++IKL ++ + EN V P+ TY M+ YCK
Sbjct: 288 ADAIKLMDD-----MGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSA 342
Query: 207 -----------MGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
G IE A +++ M K P+ +T+I+ CK+G++ EA+K E
Sbjct: 343 LCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEF 402
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
RG P+ LTYN +I G+C G + EA L M G+K N T+ ++KG +G
Sbjct: 403 -ERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNA 461
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+ + L +++ P+ +Y ++I CK+G E ++ A G
Sbjct: 462 KEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAMASG 510
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 216/440 (49%), Gaps = 21/440 (4%)
Query: 41 ISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITD 100
+ S+ L ++ + +++V ++I + + + A+ F+ A+ N ++ H T + I
Sbjct: 1 MGSKTLFKWPKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHET--FGLIIS 58
Query: 101 VLLSHSLISIAASLLKNSNK-----LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG 155
L++ + A +L+ + D F+S + + YG AI FH+ + +
Sbjct: 59 RLVTVNQFRPAEGMLERMKQEKCMVTEDIFLS-ICRGYGRVHRPLDAIRVFHKMEGFQLR 117
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK-MGMIENAK 214
+Y ++L +LV N +K A F+ ++ +E +P V + +I+ CK +++A
Sbjct: 118 PTQKAYLTILDILVEENHVKRAIGFYREM-RELGIPSSVVSLNILIKALCKNKETVDSAL 176
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++F M +P+ Y T+ING C+ G + EAK+ EM +G + +TY ++I+GL
Sbjct: 177 RIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGL 236
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C + +DEA L+ +M+ N + NV T+ S++ GLC G QA+ L + + + P++
Sbjct: 237 CQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNM 296
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +ING CK K EA+ +L MR +GLKP + + L G A + +
Sbjct: 297 VTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDE 356
Query: 392 MPQMDCLPNFVSY-------NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
M PN S+ N ++ GLC + + + R +++ + CL+
Sbjct: 357 MVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRC-ISVEIDTFDCLV 415
Query: 445 KGYCEEGNVENVMQIAHEMV 464
K +C+ G++ +I EMV
Sbjct: 416 KCFCKRGDLHKAARILEEMV 435
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 188/395 (47%), Gaps = 34/395 (8%)
Query: 49 FSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLI 108
S+C G V + P A+ F+ P T Y I D+L+ + +
Sbjct: 89 LSICRGYGRVHR-------PLDAIRVFHKMEGFQLRP-----TQKAYLTILDILVEENHV 136
Query: 109 SIAASLLKNSNKL----SDFFISKLIKAY-GDRGNVKAAIFWFHQAKQIENGACL---YS 160
A + +L S ++ LIKA ++ V +A+ F +++ N C Y+
Sbjct: 137 KRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIF---QEMPNRGCQPDSYT 193
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ L R+ +I A+E F ++ ++ V TYT++I G C+ ++ A + + M
Sbjct: 194 YGTLINGLCRLGNISEAKELFKEM-EQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEM 252
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
++PN+ Y+++++G CK G +A + + M + PN +TY+ +I GLC ++
Sbjct: 253 KRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKL 312
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD------- 330
EA ++ +MR+ G K N + ++ GLC G + +A ++ ++ ++P+
Sbjct: 313 REAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLH 372
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V+ + +V+ G C A L MR R + + +F+ + + + G+L +A +L+
Sbjct: 373 VRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILE 432
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+M C+P+ +N +I GL K + E L+
Sbjct: 433 EMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLL 467
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 3/252 (1%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+ +I+ + A+ + M C E + ++ G R +A + KM
Sbjct: 52 TFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKM 111
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+ + ++L L +A+G+ R + E + V S ++I CK ++
Sbjct: 112 EGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKET 171
Query: 348 -DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
D A+ + +EM RG +P +++ + L G + A L K+M Q + V+Y +
Sbjct: 172 VDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTS 231
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+I GLC + + + L++ M R+ + YS L+ G C+ G+ MQ+ E++ K
Sbjct: 232 LIHGLCQSNN-LDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLL-EVMDK 289
Query: 467 KGRLLKLKNFLT 478
K L + + T
Sbjct: 290 KHHLPNMVTYST 301
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%)
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
NGF+ + T ++ L V +F A G L + + + + G+ ++ + +
Sbjct: 44 NGFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLD 103
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
AI + +M L+PT ++ + ILVE + RAI ++M ++ + VS N +I
Sbjct: 104 AIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIK 163
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC K + + M G D Y L+ G C GN+ ++ EM K
Sbjct: 164 ALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQK 220
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 173/338 (51%), Gaps = 5/338 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI YG G+++ F++ K + + +YN L+ + + A E+F ++ K N
Sbjct: 330 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM-KNN 388
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P+V TY+T+I +CK GM++ A K+F M + PN Y ++I+ CK G L EA
Sbjct: 389 GLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEA 448
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K +N+M+ G + N +TY A++ GLC GR+ EA+ + M +G N + +++ G
Sbjct: 449 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 508
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+ + A+ L+ + E N+ PD+ Y +I G C K +E +L+EM++RG+
Sbjct: 509 YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 568
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ + G+ A+ ++M + V+Y +I GLC A G ++ D
Sbjct: 569 PVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKA-GIVELAVDYF 627
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
RM+ G + +Y+ L+ G C+ +E+ ++ EM
Sbjct: 628 CRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEM 665
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 186/401 (46%), Gaps = 14/401 (3%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKL----SDFF 125
A +F+ N PN Y+ + D ++ A L + + ++F
Sbjct: 377 RAFEYFSEMKNNGLKPN-----VVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFT 431
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ LI A GN+ A + Q + +Y +LL L + + AEE F ++
Sbjct: 432 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 491
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
K+ + P+ YT ++ GY K +E+A K+ MT +KP+L+ Y ++I G C + +L
Sbjct: 492 KDGI-SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 550
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EE K + EM +RG N + +I G+ +A +M+ G + + T+ +
Sbjct: 551 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 610
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC G + AV Y ++ + P+V Y +I+G CK + A L EM+ RG+
Sbjct: 611 IDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGM 670
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P + +F A+ +++G L A++L+ +M ++ + Y +++ G G +
Sbjct: 671 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQC-GELHQAR 729
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ MI G + + CLL+ Y + G ++ +++ +EM
Sbjct: 730 KFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 770
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 201/447 (44%), Gaps = 35/447 (7%)
Query: 49 FSLCLGSNIVTKVIYE-QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSL 107
F L V+K++ + +P AL FF WA + + HTT Y I ++ +
Sbjct: 123 FDSALAPIWVSKILLGLREDPKLALKFFKWAGSQV----GFRHTTESYCIIVHLVFRARM 178
Query: 108 ISIAASLLK----NSN--------KLSDFFISK-------------LIKAYGDRGNVKAA 142
+ A +K NS + D S L + + G ++ A
Sbjct: 179 YTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEA 238
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
F + + S N LL L + + +L +FF+ ++ + P V TY MI
Sbjct: 239 NECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAP-SVFTYNVMID 297
Query: 203 GYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
CK G +EN++++F M + P+++ YN++I+G+ K G LEE NEM + GC P
Sbjct: 298 YLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVP 357
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TYN +I C ++ A ++M+ NG K NV T+ +++ C G A+
Sbjct: 358 DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLF 417
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
++ + P+ +Y +I+ CK G EA LL +M G+K + ++ A+ L +
Sbjct: 418 VDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKA 477
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
G + A + + M + PN Y ++ G A+ RM+D ++ +M D +
Sbjct: 478 GRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE-RMEDAMKILKQMTECNIKPDLIL 536
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y ++ G+C + +E I EM ++
Sbjct: 537 YGSIIWGHCSQRKLEETKLILEEMKSR 563
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 162/309 (52%), Gaps = 5/309 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN ++ L + ++ + F Q+ +E + PDV TY ++I GY K+G +E +F
Sbjct: 289 VFTYNVMIDYLCKEGDLENSRRLFVQM-REMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 347
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M P+++ YN +IN +CK ++ A + +EM N G +PN +TY+ +I C
Sbjct: 348 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKE 407
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + A L MR G N T+ S++ C G +A L ++++A + ++ +Y
Sbjct: 408 GMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 467
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++G CK G+ EA + + M G+ P + A+ ++ ++ A+ +LKQM +
Sbjct: 468 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 527
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ P+ + Y +II G C ++ ++++ + +++ M G + + + + ++ Y + G
Sbjct: 528 CNIKPDLILYGSIIWGHC-SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 586
Query: 455 NVMQIAHEM 463
+ + EM
Sbjct: 587 DALNFFQEM 595
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
F Q +++ V + TY +I G CK G++E A F M ++PN+ Y ++I+G C
Sbjct: 591 FFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC 650
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K +E AKK +EM RG P+ + A+I G +G + EA +L+++M + ++
Sbjct: 651 KNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 710
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
+ S++ G G+ QA + ++E + P+ ++ + K G+ DEAI L EM
Sbjct: 711 VYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 770
Query: 358 RARGL 362
GL
Sbjct: 771 ERMGL 775
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 3/201 (1%)
Query: 198 TTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
TT+I Y K G +A F M V+ ++ Y +I+G CK G +E A M++
Sbjct: 573 TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLS 632
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
G +PN Y ++I GLC N ++ AK L +M+ G +++ +++ G G +
Sbjct: 633 LGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 692
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+ + + E + D+ Y +++GF + G+ +A EM +G+ P + R
Sbjct: 693 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 752
Query: 375 ILVENGELDRAILLLKQMPQM 395
+ G+LD AI L +M +M
Sbjct: 753 EYYKRGQLDEAIELKNEMERM 773
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 172/346 (49%), Gaps = 40/346 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LYSYN L+ R + + LA +++K PD+ T ++++ GYC I +A +
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGY-EPDIVTLSSLLNGYCHSKRISDAVALV 173
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M KP+ + +NT+I+G + EA +++M+ RGC+P+ +TY A++ GLC
Sbjct: 174 DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKR 233
Query: 275 G-----------------------------------RVDEAKMLMAKMRLNGFKDNVSTH 299
G +D+A L KM G + +V T+
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTY 293
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S++ LC G++ A L N++E +NP+V ++ +I+ F K GK EA L EM
Sbjct: 294 NSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
R + P +F+++++ + LD A + + M DC PN V+YNT+I G C AK R++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK-RVE 412
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ +L M + G + Y+ L++G + G+ + +I +MV+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 194/406 (47%), Gaps = 14/406 (3%)
Query: 70 HALFFFNWASNPNPNPNKY-----HHTTPCYTAITDVLLSHSLISIAASLLKNSNK---L 121
H LF N AS ++ Y A+ + L I +A SLLK K
Sbjct: 193 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 122 SDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
+D I + +I ++ A F++ + +++YNSL+ L A
Sbjct: 253 ADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRL 312
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFC 237
++ E + P+V T++ +I + K G + A+K++D M ++ P++ Y+++INGFC
Sbjct: 313 LSNMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
L+EAK M+++ C PN +TYN +I G C RV+E L +M G N
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++++GL G D A + ++ + PD+ +Y ++++G CK GK ++A+ + + +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ ++P ++++N + + + G+++ L + PN + Y T+I G C KG
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC-RKGL 550
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ + L M G D Y+ L++ +G+ ++ EM
Sbjct: 551 KEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 596
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 168/329 (51%), Gaps = 7/329 (2%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTM 200
AI F + Q + +N LL + ++ L ++ +N+ + D+ +Y +
Sbjct: 64 AIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERM--QNLRISYDLYSYNIL 121
Query: 201 IRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I +C+ + A V M +P+++ ++++NG+C + +A +++M+ G
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 181
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
+P+ +T+N +I+GL ++ + EA L+ +M G + ++ T+ +++ GLC G D A+
Sbjct: 182 KPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALS 241
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L+ + + + DV Y +I+G CK D+A +L +M +G++P VF++N++ L
Sbjct: 242 LLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC 301
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
G A LL M + PN V+++ +I + +G++ + E L D MI+ + D
Sbjct: 302 NYGRWSDASRLLSNMIERKINPNVVTFSALIDAF-VKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
YS L+ G+C ++ + M++K
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISK 389
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 116/231 (50%), Gaps = 5/231 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + ++ E F ++ + +V V TY T+I+G + G + A+K+F
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+++ Y+ +++G CK G+LE+A + P+ TYN MI G+C G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L + L G K NV + +M+ G C G ++A R + E PD Y
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNT 575
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L+KEMR+ G + + V +L +G L+++ L
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSYL 625
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 169/346 (48%), Gaps = 40/346 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y L+ L + A + + +V++ P +V TY ++ G CK G++ +A K+ +
Sbjct: 321 TYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV-TYNVLLSGLCKEGLVIDAFKILRM 379
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM-NRGC-RPNELTYNAMIYGLCIN 274
M K +++ YNT++ G C KG+++EA K N M N C PN T+N +I GLC
Sbjct: 380 MIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE 439
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+ +A + KM G N+ T+ +L G GK +A+ + V++ P+ +Y
Sbjct: 440 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTY 499
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I+GFCK+ + A L EMR GL P +F +N + L + G L++A L ++M
Sbjct: 500 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 559
Query: 395 MDCLPNFVSYNTIICGLCMAK----------------------------------GRMQD 420
+C P+ +S+NT+I G A G + +
Sbjct: 560 ANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDE 619
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ ++RM+ SG D +Y LLKG +G+ ++ + H+M K
Sbjct: 620 AKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 665
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 148/267 (55%), Gaps = 4/267 (1%)
Query: 200 MIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
+++G C+ G + A + M +V P++++YNT+ING CK +L+EA + EM G
Sbjct: 150 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 209
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C PN +T ++ GLC +GR+DEA L+ M+ GF +V + +++ G C G D+
Sbjct: 210 CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 269
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
++ ++ +V +Y +++G C++G+ EA ++L M G+ P V ++ + L
Sbjct: 270 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 329
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
++G A+ LL M + P+ V+YN ++ GLC +G + D ++ MI G D
Sbjct: 330 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC-KEGLVIDAFKILRMMIEKGKKAD 388
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ L+KG C++G V+ +++ + M
Sbjct: 389 VVTYNTLMKGLCDKGKVDEALKLFNSM 415
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 165/309 (53%), Gaps = 9/309 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ ++ +E F +++ + + +V TY+ ++ G C++G + A V + M
Sbjct: 252 YGTLISGFCNNGNLDRGKELFDEMLGKGI-SANVVTYSCLVHGLCRLGQWKEANTVLNAM 310
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ Y +I+G CK G A +N M+ +G P+ +TYN ++ GLC G V
Sbjct: 311 AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 370
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM--EANMNPDVKSYE 335
+A ++ M G K +V T+ +++KGLC GK D+A+ ++ E + P+V ++
Sbjct: 371 IDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFN 430
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++I G CK G+ +A+ + ++M +G + ++N + ++ G++ A+ L KQ+ +
Sbjct: 431 MLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL 490
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDV-EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+PN +Y+ +I G C K RM ++ + L M G N Y+ L+ C+EG++E
Sbjct: 491 GFVPNSFTYSILIDGFC--KMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLE 548
Query: 455 NVMQIAHEM 463
+ EM
Sbjct: 549 QAKSLFQEM 557
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 159/314 (50%), Gaps = 7/314 (2%)
Query: 152 IENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK-ENVVPPDVSTYTTMIRGYCKMG 208
IE G A + +YN+L+ L + A + F+ + EN + P+V T+ +I G CK G
Sbjct: 381 IEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 440
Query: 209 MIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+ A K+ M K NL+ YN ++ G K G+++EA + ++++ G PN TY+
Sbjct: 441 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 500
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+I G C ++ AK L +MR +G + + +++ LC G +QA + + A
Sbjct: 501 ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 560
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
N PD+ S+ +I+G K G L +M GL+P +F+ + L + GELD A
Sbjct: 561 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 620
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L++M P+ + Y++++ GL +KG ++ +L+ +M G LD + S +L
Sbjct: 621 KSALERMVASGFTPDALVYDSLLKGLS-SKGDTTEIINLLHQMAAKGTVLDRKIVSTILT 679
Query: 446 GYCEEGNVENVMQI 459
C +VM++
Sbjct: 680 CLCHSIQEVDVMEL 693
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 154/335 (45%), Gaps = 19/335 (5%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ FH A + N L+ L R + LA + ++ +V+P + + +I
Sbjct: 58 AVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLP-SFGSLSALI 116
Query: 202 R----------GYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
G+ +G++ K+ F V N+ N ++ G C+ G + EA + E
Sbjct: 117 ECFADAQKPQLGFGVVGLV--LKRGFTV-----NVFIMNIVLKGLCRNGGVFEAMGLIRE 169
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M + P+ ++YN +I GLC ++ EA L+ +M G N T +++ GLC G+
Sbjct: 170 MGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGR 229
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+A+ L + + + DV Y +I+GFC G D L EM +G+ V +++
Sbjct: 230 MDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSC 289
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L G+ A +L M + P+ V+Y +I GLC GR DL++ M+
Sbjct: 290 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLC-KDGRATHAMDLLNLMVEK 348
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G Y+ LL G C+EG V + +I M+ K
Sbjct: 349 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 383
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 126/284 (44%), Gaps = 45/284 (15%)
Query: 113 SLLKNSNKLSD--FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVL 168
S+ N N L F + LI G + A+ H+ K ++ G+C L +YN LLG
Sbjct: 414 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV-KIHR-KMVKKGSCGNLVTYNMLLGGC 471
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM--------------------- 207
++ IK A E + Q++ VP TY+ +I G+CKM
Sbjct: 472 LKAGKIKEAMELWKQVLDLGFVPNSF-TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPA 530
Query: 208 --------------GMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
G +E AK +F M +P+++++NTMI+G K G+ + K+
Sbjct: 531 LFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQM 590
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
+M+ G RP+ LT++ +I L G +DEAK + +M +GF + + S+LKGL G
Sbjct: 591 KMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKG 650
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+ + L + D K ++ C + + + LL
Sbjct: 651 DTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 694
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 146/264 (55%), Gaps = 10/264 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ V+ + AE+ + +++K ++ PD+ TY+++I G+C ++ AK +F++
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ YNT+I GFCK +EE + EM RG N +TYN +I GL G
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+ + KM +G ++ T+ +L GLC GK ++A+ + ++ M PD+ +Y +
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK GK ++ L + +G+KP V + + G + A L ++M +
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 397 CLPNFVSYNTIICGLCMAKGRMQD 420
LPN +YNT+I + R++D
Sbjct: 566 TLPNSGTYNTLI------RARLRD 583
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 172/346 (49%), Gaps = 40/346 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LYSYN L+ R + + LA +++K PD+ T ++++ GYC I A +
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGY-EPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 218 D---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D VM +PN + +NT+I+G + EA ++ M+ RGC+P+ TY ++ GLC
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 275 GRVDEAKMLMAKMR---------------------------LN--------GFKDNVSTH 299
G +D A L+ KM LN G + NV T+
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S+++ LC G++ A L +++E +NP+V ++ +I+ F K GK EA L EM
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
R + P +F+++++ + LD A + + M DC PN V+YNT+I G C AK R++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK-RVE 412
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ +L M + G + Y+ L++G + G+ + +I +MV+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 194/406 (47%), Gaps = 14/406 (3%)
Query: 70 HALFFFNWASNPNPNPNKY--HHTTP---CYTAITDVLLSHSLISIAASLLKNSNK---L 121
H LF N AS ++ P Y + + L I +A SLLK K
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 122 SDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
+D I + +I A + NV A+ F + + +YNSL+ L A
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFC 237
++ E + P+V T++ +I + K G + A+K++D M ++ P++ Y+++INGFC
Sbjct: 313 LSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
L+EAK M+++ C PN +TYN +I G C RV+E L +M G N
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++++GL G D A + ++ + PD+ +Y ++++G CK GK ++A+ + + +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ ++P ++++N + + + G+++ L + PN + Y T+I G C KG
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC-RKGL 550
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ + L M G + Y+ L++ +G+ ++ EM
Sbjct: 551 KEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 166/329 (50%), Gaps = 7/329 (2%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTM 200
A+ F + Q + +N LL + ++N L ++ +N+ + D+ +Y +
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM--QNLRISYDLYSYNIL 121
Query: 201 IRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I +C+ + A V M +P+++ ++++NG+C + EA +++M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
+PN +T+N +I+GL ++ + EA L+ +M G + ++ T+ +++ GLC G D A+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L+ + + + DV Y +I+ C ++A++L EM +G++P V ++N++ R L
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
G A LL M + PN V+++ +I + +G++ + E L D MI+ + D
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAF-VKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
YS L+ G+C ++ + M++K
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISK 389
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 5/231 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + ++ E F ++ + +V V TY T+I+G + G + A+K+F
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+++ Y+ +++G CK G+LE+A + P+ TYN MI G+C G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L + L G K NV + +M+ G C G ++A R + E P+ +Y
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L+KEMR+ G + + V +L +G L+++ L
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSYL 625
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 117/244 (47%), Gaps = 1/244 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ +N +++ K + + M N + +YN +I C ++ A +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ KM G++ ++ T S+L G C + +AV + + P+ ++ +I+G
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
K+ EA++L+ M ARG +P +F++ V L + G++D A+ LLK+M + + V
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y TII LC K + D +L M G + Y+ L++ C G + ++ +M
Sbjct: 258 YTTIIDALCNYKN-VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 464 VTKK 467
+ +K
Sbjct: 317 IERK 320
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L++A EM+ P+ + +N ++ + + D L +M+ ++ ++
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ C + A+ L +M+ PD+ + ++NG+C + EA++L+ +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+P +FN + L + + A+ L+ +M C P+ +Y T++ GLC +G +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC-KRGDIDL 238
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
L+ +M + D +Y+ ++ C NV + + + EM K R
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 171/346 (49%), Gaps = 15/346 (4%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+ N L+ +N + A I+K P +T+TT+IRG C G I A ++FD
Sbjct: 90 YTLNILINSFCHLNRLGFAFSVLGDILKLGY-QPSTATFTTLIRGLCVEGKIGEALQLFD 148
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
MT +P++L Y T+ING CK G A + + M R CRP + Y+ +I LC +
Sbjct: 149 KMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDR 208
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++ EA L + M G N T+ S++ GLC++G + +A+ ++ + PD ++
Sbjct: 209 QLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFN 268
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++ CK G +A ++ M LKP V ++N++ E+ + + + M +
Sbjct: 269 TLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C+P+ +SY T+I G C + M L + M + G D Y+ L+ G C G + +
Sbjct: 329 GCVPSVISYTTLINGYCKIQ-IMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRD 387
Query: 456 VMQIAHEMVTKKGRLLKLKNFLT---------RVVDALLLMWIVTG 492
+ + HEMV G++ L + R+ +A++L+ ++ G
Sbjct: 388 AIALFHEMVV-YGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEG 432
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 198/401 (49%), Gaps = 6/401 (1%)
Query: 67 NPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFI 126
N A+ F N P ++T + D L+ +L S+ + +L ++F
Sbjct: 174 NTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL-SLFSDMLAKGISPNNFTY 232
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI G+ K AI F+ + ++N+L+ L + + A +++
Sbjct: 233 SSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQ 292
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
++ PDV TY +++ G+C + VFD M K P++++Y T+ING+CK ++
Sbjct: 293 SDL-KPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMD 351
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A EM +G P+ +TYN +I+GLC GR+ +A L +M + G ++ T++ +
Sbjct: 352 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILF 411
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC + +A+ L+ + N++PD+ Y +V++G C+ G+ + A L ++ ++GL
Sbjct: 412 DYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLH 471
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++ + L + G L A L +M + C PN +YN I G ++ ++
Sbjct: 472 PDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQ- 530
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L M+ G ++D + + L++ ++G ++V QI E V
Sbjct: 531 LFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFV 571
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 151/299 (50%), Gaps = 5/299 (1%)
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM---GMIENAKKVFDVMTVKPNLL 227
VN+I A F+++++ PP + ++ ++ +M + + K D + N
Sbjct: 32 VNTIDDALSLFNRMLRMRP-PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
N +IN FC L A + +++ G +P+ T+ +I GLC+ G++ EA L KM
Sbjct: 91 TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
GF+ +V T+ +++ GLC VG A+ +LR++ + N P V Y +I+ CK +
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQL 210
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
EA+SL +M A+G+ P F+++++ L G AI L M +P+ +++NT+
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ LC +G + +VD MI+S D Y+ L+ G+C + + + MV K
Sbjct: 271 VDALC-KEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 157/311 (50%), Gaps = 5/311 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y+SL+ L + K A F+ ++ ++P D T+ T++ CK GM+ A V D
Sbjct: 230 FTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMP-DQLTFNTLVDALCKEGMVVKAHYVVD 288
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
VM +KP+++ YN++++G C + E+ + + M+ +GC P+ ++Y +I G C
Sbjct: 289 VMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQ 348
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+D+A L +M G + T+ +++ GLC VG+ A+ ++ PD+ +Y
Sbjct: 349 IMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYR 408
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++ + CK + EA+ LLK + L P + ++ V + GEL+ A L ++
Sbjct: 409 ILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSK 468
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ +Y +I GLC +G + + L M +G + + Y+ + +G+
Sbjct: 469 GLHPDVRTYTIMINGLC-QQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLR 527
Query: 456 VMQIAHEMVTK 466
+Q+ EM+++
Sbjct: 528 AIQLFQEMLSR 538
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 161/310 (51%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM---GMIENAKKV 216
S+N+ + N++ A F++++ + PP ++ +T ++ KM + +
Sbjct: 35 SHNTFHSKSLNFNTLDDALSSFNRMLHMHP-PPSIADFTKLLISITKMKHYSTVLSLSHQ 93
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
D + PN+ N +IN FC L A + +++ G +PN T+N +I GLC+ G+
Sbjct: 94 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 153
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ E L KM GF+ NV T+ +++ GLC VG A+ LR++ + N PDV Y
Sbjct: 154 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 213
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ CK + +A +L EM +G+ P++F++N++ L E LL +M
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 273
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+PN V ++T++ LC +G++ + D+VD MI+ G + Y+ L+ G+C ++
Sbjct: 274 IMPNVVIFSTVVDALC-KEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEA 332
Query: 457 MQIAHEMVTK 466
+++ MV K
Sbjct: 333 VKVFDTMVCK 342
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 173/344 (50%), Gaps = 11/344 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI G+ AAI + +E G C + Y S++ L + + A F +++
Sbjct: 179 LINGLCKVGSTSAAIRLL---RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 235
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ + P + TY ++I C + ++ + + M + PN++ ++T+++ CK+G++
Sbjct: 236 HQGI-SPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKV 294
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA ++ M+ RG PN +TYNA++ G C+ +DEA + M GF +V ++ ++
Sbjct: 295 MEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTL 354
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G C + + ++A+ + + P+ +Y +++G C +G+ +AI+L EM RG
Sbjct: 355 INGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQ 414
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P S+ + L +N LD AI LLK + + P+ Y +I G+C A G ++
Sbjct: 415 IPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA-GELEAAR 473
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
DL + G + + Y+ ++ G C++G + ++ EM K
Sbjct: 474 DLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK 517
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 172/349 (49%), Gaps = 7/349 (2%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
++DF +KL+ + + + HQ +Y+ N L+ + + A
Sbjct: 68 IADF--TKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+I+K P+++T+ T+IRG C G I +FD M +PN++ Y T+ING C
Sbjct: 126 LAKILKLGH-QPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLC 184
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G A + + M C+P+ + Y ++I LC + +V +A L ++M G ++
Sbjct: 185 KVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIF 244
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ S++ LC + ++ L ++ + + P+V + V++ CK GK EA ++ M
Sbjct: 245 TYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 304
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
RG++P V ++NA+ E+D A+ + M P+ VSY+T+I G C + R
Sbjct: 305 IKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQ-R 363
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ L + M R + YS L+ G C G +++ + + HEMVT+
Sbjct: 364 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTR 412
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 165/307 (53%), Gaps = 5/307 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+++++ L + + A + ++K V P+V TY ++ G+C ++ A KVFD M
Sbjct: 281 FSTVVDALCKEGKVMEAHDVVDMMIKRGV-EPNVVTYNALMDGHCLRSEMDEAVKVFDTM 339
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K P++++Y+T+ING+CK +E+A EM + PN +TY+ +++GLC GR+
Sbjct: 340 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 399
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A L +M G + ++ +L LC + D+A+ L+ + +NM+PD++ Y +V
Sbjct: 400 QDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 459
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G C+ G+ + A L + ++GL P V+++ + L + G L A L +M +
Sbjct: 460 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 519
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +YN I G ++ ++ L+ M+ G + D + + L++ ++G ++V
Sbjct: 520 SPNGCTYNLITRGFLRNNETLRGIQ-LLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVK 578
Query: 458 QIAHEMV 464
QI E +
Sbjct: 579 QILSEFL 585
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 159/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YNSL+ L + K +++V ++P +V ++T++ CK G + A V
Sbjct: 243 IFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP-NVVIFSTVVDALCKEGKVMEAHDVV 301
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D+M V+PN++ YN +++G C + E++EA K + M+ +G P+ ++Y+ +I G C
Sbjct: 302 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 361
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+++A L +M N T+ +++ GLC VG+ A+ ++ PD SY
Sbjct: 362 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 421
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++ CK + DEAI+LLK + + P + + V + GEL+ A L +
Sbjct: 422 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 481
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN +Y +I GLC +G + + L M R G++ + Y+ + +G+
Sbjct: 482 KGLHPNVWTYTIMINGLC-QQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETL 540
Query: 455 NVMQIAHEMVTK 466
+Q+ EM+ +
Sbjct: 541 RGIQLLQEMLAR 552
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A+ ++ + P + + ++ K+ +SL +M + G+ P +++ N
Sbjct: 49 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L A +L ++ ++ PN ++NT+I GLC+ +G++ +V L D+MI
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCV-EGKIGEVLHLFDKMIGE 167
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
G + Y L+ G C+ G+ +++ M ++G T ++D+L
Sbjct: 168 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM--EQGNCQPDVVVYTSIIDSL 218
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 146/264 (55%), Gaps = 10/264 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ V+ + AE+ + +++K ++ PD+ TY+++I G+C ++ AK +F++
Sbjct: 311 TFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFEL 369
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ YNT+I GFCK +EE + EM RG N +TYN +I GL G
Sbjct: 370 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 429
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+ + KM +G ++ T+ +L GLC GK ++A+ + ++ M PD+ +Y +
Sbjct: 430 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 489
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK GK ++ L + +G+KP V + + G + A L ++M +
Sbjct: 490 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 549
Query: 397 CLPNFVSYNTIICGLCMAKGRMQD 420
LPN +YNT+I + R++D
Sbjct: 550 TLPNSGTYNTLI------RARLRD 567
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 172/346 (49%), Gaps = 40/346 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LYSYN L+ R + + LA +++K PD+ T ++++ GYC I A +
Sbjct: 99 LYSYNILINCFCRRSQLPLALAVLGKMMKLGY-EPDIVTLSSLLNGYCHGKRISEAVALV 157
Query: 218 D---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D VM +PN + +NT+I+G + EA ++ M+ RGC+P+ TY ++ GLC
Sbjct: 158 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 217
Query: 275 GRVDEAKMLMAKMR---------------------------LN--------GFKDNVSTH 299
G +D A L+ KM LN G + NV T+
Sbjct: 218 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 277
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S+++ LC G++ A L +++E +NP+V ++ +I+ F K GK EA L EM
Sbjct: 278 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 337
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
R + P +F+++++ + LD A + + M DC PN V+YNT+I G C AK R++
Sbjct: 338 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK-RVE 396
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ +L M + G + Y+ L++G + G+ + +I +MV+
Sbjct: 397 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 442
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 194/406 (47%), Gaps = 14/406 (3%)
Query: 70 HALFFFNWASNPNPNPNKY--HHTTP---CYTAITDVLLSHSLISIAASLLKNSNK---L 121
H LF N AS ++ P Y + + L I +A SLLK K
Sbjct: 177 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 236
Query: 122 SDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
+D I + +I A + NV A+ F + + +YNSL+ L A
Sbjct: 237 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 296
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFC 237
++ E + P+V T++ +I + K G + A+K++D M ++ P++ Y+++INGFC
Sbjct: 297 LSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 355
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
L+EAK M+++ C PN +TYN +I G C RV+E L +M G N
Sbjct: 356 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 415
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++++GL G D A + ++ + PD+ +Y ++++G CK GK ++A+ + + +
Sbjct: 416 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 475
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ ++P ++++N + + + G+++ L + PN + Y T+I G C KG
Sbjct: 476 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC-RKGL 534
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ + L M G + Y+ L++ +G+ ++ EM
Sbjct: 535 KEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 580
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 166/329 (50%), Gaps = 7/329 (2%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTM 200
A+ F + Q + +N LL + ++N L ++ +N+ + D+ +Y +
Sbjct: 48 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM--QNLRISYDLYSYNIL 105
Query: 201 IRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I +C+ + A V M +P+++ ++++NG+C + EA +++M
Sbjct: 106 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 165
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
+PN +T+N +I+GL ++ + EA L+ +M G + ++ T+ +++ GLC G D A+
Sbjct: 166 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 225
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L+ + + + DV Y +I+ C ++A++L EM +G++P V ++N++ R L
Sbjct: 226 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 285
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
G A LL M + PN V+++ +I + +G++ + E L D MI+ + D
Sbjct: 286 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAF-VKEGKLVEAEKLYDEMIKRSIDPDI 344
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
YS L+ G+C ++ + M++K
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISK 373
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 5/231 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + ++ E F ++ + +V V TY T+I+G + G + A+K+F
Sbjct: 381 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYNTLIQGLFQAGDCDMAQKIFKK 439
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+++ Y+ +++G CK G+LE+A + P+ TYN MI G+C G+
Sbjct: 440 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 499
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L + L G K NV + +M+ G C G ++A R + E P+ +Y
Sbjct: 500 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 559
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L+KEMR+ G + + V +L +G L+++ L
Sbjct: 560 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSYL 609
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 117/244 (47%), Gaps = 1/244 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ +N +++ K + + M N + +YN +I C ++ A +
Sbjct: 62 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 121
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ KM G++ ++ T S+L G C + +AV + + P+ ++ +I+G
Sbjct: 122 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 181
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
K+ EA++L+ M ARG +P +F++ V L + G++D A+ LLK+M + + V
Sbjct: 182 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 241
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y TII LC K + D +L M G + Y+ L++ C G + ++ +M
Sbjct: 242 YTTIIDALCNYKN-VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 300
Query: 464 VTKK 467
+ +K
Sbjct: 301 IERK 304
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L++A EM+ P+ + +N ++ + + D L +M+ ++ ++
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ C + A+ L +M+ PD+ + ++NG+C + EA++L+ +M
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+P +FN + L + + A+ L+ +M C P+ +Y T++ GLC +G +
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC-KRGDIDL 222
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
L+ +M + D +Y+ ++ C NV + + + EM K R
Sbjct: 223 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 271
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 159/285 (55%), Gaps = 6/285 (2%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCM 249
D + Y T+I G CK +A ++ VM +++ Y T+I+G CK G+L+ A+ +
Sbjct: 9 DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M + GC PN +TY A+I GLC R +A + +M +G + ++ T+ S++ GLC+
Sbjct: 69 QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128
Query: 310 GKFDQAVGYLRNVM-EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+ D A L+ +M E+ PDV +Y I+G CK GK D+ + +L+EM G+ P V +
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
F ++ L + +D A + K M + C+P+ ++Y+ ++ L A R+ VE++++ M
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRAN-RLDTVEEVLEHM 247
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKL 473
++SGH Y+ L+ G++E+ A+E + G ++++
Sbjct: 248 VKSGHYALSATYAPLIHALIRAGDIESA-SWAYEQAMEAGCVMEV 291
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 168/343 (48%), Gaps = 41/343 (11%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ L + + A E H ++ N V TYTT+I G CK G ++ A+ + M
Sbjct: 13 YNTLIAGLCKARKPRHALELLH-VMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKM 71
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
PN++ Y +I+G CK +A + + M+ GC P+ +TYN++I+GLC+ R+
Sbjct: 72 ADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRM 131
Query: 278 DEAKMLMAKMRL-NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D+A +++ ++ + +G +V T+ + + GLC GK D+ + L + ++PDV ++
Sbjct: 132 DDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCS 191
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN-------------------------- 370
+I+G CK + D+A + K M RG P +++
Sbjct: 192 IISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSG 251
Query: 371 ---------AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ L+ G+++ A +Q + C+ ++N I LC + G+
Sbjct: 252 HYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRS-GKFPLA 310
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
++++ MI SG + Y+ ++ G C+ GNV++ +++ +M+
Sbjct: 311 KNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 353
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 191/422 (45%), Gaps = 25/422 (5%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
N + + + P HAL + + N Y + YT + D L + A +LL
Sbjct: 14 NTLIAGLCKARKPRHALELLHVMA-----ANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68
Query: 116 KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQA----KQIENGAC---LYSYNSLLGVL 168
+ K++D + + Y + H A K++ C L +YNSL+ L
Sbjct: 69 Q---KMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGL 125
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPN 225
N + A +++ E+ PDV TY T I G CK G ++ ++ + M + P+
Sbjct: 126 CMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPD 185
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++ + ++I+G CK +++A + M+ RGC P+ LTY+ M+ L R+D + ++
Sbjct: 186 VVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLE 245
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
M +G +T+ ++ L G + A MEA +V ++ I C+ G
Sbjct: 246 HMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSG 305
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL-PNFVSY 404
K A ++L M G P + S+N V L ++G +D A L ++M C P+ + +
Sbjct: 306 KFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFF 365
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNL---DFTMYSCLLKGYCEEGNVENVMQIAH 461
NT+I G C A GR+ + L+ M N+ D Y+ ++ G + G+++ +
Sbjct: 366 NTLISGFCKA-GRLSQAQQLLKEM--KAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLE 422
Query: 462 EM 463
EM
Sbjct: 423 EM 424
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 160/345 (46%), Gaps = 7/345 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI G++ AA + + +Y +L+ L + A + ++++
Sbjct: 49 TTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLR 108
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMINGFCKKGEL 242
PD+ TY ++I G C +++A V + ++ P+++ YNT I+G CK G+L
Sbjct: 109 SGC-EPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKL 167
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++ + + EM G P+ +T+ ++I GLC R+D+A + M G + T+ M
Sbjct: 168 DKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIM 227
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
L L + D L +++++ +Y +I+ + G + A ++ G
Sbjct: 228 LDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGC 287
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
V++ NA L +G+ A +L M + LPN +SYN +I GLC + G + D
Sbjct: 288 VMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKS-GNVDDAW 346
Query: 423 DLVDRMIRSG-HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L +M+ SG D ++ L+ G+C+ G + Q+ EM K
Sbjct: 347 KLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAK 391
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 115/216 (53%), Gaps = 2/216 (0%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M +R R + YN +I GLC + A L+ M NG+ +V T+ +++ GLC G
Sbjct: 1 MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A L+ + +A P+V +Y +I+G CK + +AI +K M G +P + ++N+
Sbjct: 61 LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120
Query: 372 VFRILVENGELDRAILLLKQ-MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ L +D A L+L++ M + +P+ V+YNT I GLC A G++ ++++ M R
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKA-GKLDKGLEMLEEMDR 179
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G + D + ++ G C+ +++ Q+ M+ +
Sbjct: 180 GGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLER 215
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 33/265 (12%)
Query: 106 SLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
+ SI + L K +N++ D F ++ K +RG V ++ +Y+ +L
Sbjct: 188 TFCSIISGLCK-ANRIDDAF--QVFKGMLERGCVPDSL----------------TYSIML 228
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD------- 218
L R N + EE +VK +TY +I + G IE+A ++
Sbjct: 229 DNLSRANRLDTVEEVLEHMVKSGHYALS-ATYAPLIHALIRAGDIESASWAYEQAMEAGC 287
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
VM V +N I C+ G+ AK + M+ G PN L+YN +I GLC +G VD
Sbjct: 288 VMEV----YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVD 343
Query: 279 EAKMLMAKMRLNGF-KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN-PDVKSYEV 336
+A L KM +G K +V +++ G C G+ QA L+ + N+ PDV +Y
Sbjct: 344 DAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNT 403
Query: 337 VINGFCKIGKSDEAISLLKEMRARG 361
+I+G K G +A LL+EM+A G
Sbjct: 404 MIDGQSKFGSLKQAKLLLEEMQAVG 428
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 171/350 (48%), Gaps = 40/350 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+ + ++ R + LA +I+K PD T++T+I G C G + A ++
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGY-EPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 218 DVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY---------- 264
D M KP L+ N ++NG C G++ +A ++ M+ G +PNE+TY
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 265 -------------------------NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+ +I GLC +G +D A L +M + GFK ++ +
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++++G C G++D LR++++ + PDV ++ +I+ F K GK EA L KEM
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RG+ P ++ ++ + +LD+A +L M C PN ++N +I G C A +
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN-LID 404
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
D +L +M G D Y+ L++G+CE G +E ++ EMV+++ R
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 163/318 (51%), Gaps = 25/318 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ V+ ++ AEE ++++ + PD TYT++I G+CK ++ A + D+
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGI-SPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN+ +N +ING+CK +++ + +M RG + +TYN +I G C G+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ AK L +M + ++ ++K +L GLC G+ ++A+ + ++ M D+ Y +
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C K D+A L + +G+KP V ++N + L + G L A LL ++M +
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 397 CLPNFVSYNTII---------------------CGLCMAKGRMQDVEDLVDRMIRSGHNL 435
PN +YN +I CG + ++ + RM+++GH
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEP 617
Query: 436 DFTMYSCLLKGYCEEGNV 453
D ++ LL+ +C E N
Sbjct: 618 DVFTFTTLLRPFCLEENA 635
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 167/329 (50%), Gaps = 7/329 (2%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ F + + L ++ L V+ R L + Q+ + + ++ T + MI
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-NLYTLSIMI 114
Query: 202 RGYC---KMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
C K+ + +A + +P+ + ++T+ING C +G + EA + ++ M+ G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P +T NA++ GLC+NG+V +A +L+ +M GF+ N T+ +LK +C G+ A+
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
LR + E + D Y ++I+G CK G D A +L EM +G K + + + R
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-GRMQDVEDLVDRMIRSGHNLDF 437
G D LL+ M + P+ V+++ +I C K G++++ E+L MI+ G + D
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALI--DCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+ G+C+E ++ + MV+K
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 183/376 (48%), Gaps = 9/376 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y + V+ ++A LL+ KL S +I G++ A F++ +
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
A + Y +L+ + ++K + P DV ++ +I + K G +
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP-DVVAFSALIDCFVKEGKL 333
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A+++ M + P+ + Y ++I+GFCK+ +L++A ++ M+++GC PN T+N +
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C +D+ L KM L G + T+ ++++G C +GK + A + ++ +
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD+ SY+++++G C G+ ++A+ + +++ ++ + +N + + ++D A
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L +P P+ +YN +I GLC KG + + + L +M GH+ + Y+ L++ +
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLC-KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 448 CEEGNVENVMQIAHEM 463
EG+ ++ E+
Sbjct: 573 LGEGDATKSAKLIEEI 588
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 157/323 (48%), Gaps = 29/323 (8%)
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
G + ++N L+ + N I E F ++ VV D TY T+I+G+C++G +E AK
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGKLEVAK 442
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++F M V+P++++Y +++G C GE E+A + ++ + YN +I+G+
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +VD+A L + L G K +V T+ M+ GLC G +A R + E +P+
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMR------------------ARGLK----PTVFSF 369
+Y ++I G + ++ L++E++ AR LK P VF+F
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTF 622
Query: 370 NAVFR--ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+ R L EN + A L K M M PN V+YNT+I GL + + V ++D+
Sbjct: 623 TTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGL-LNGNMISQVPGVLDQ 681
Query: 428 MIRSGHNLDFTMYSCLLKGYCEE 450
M G + S + G C++
Sbjct: 682 MFERGCQPNAVTKSTFISGLCKQ 704
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 129/260 (49%), Gaps = 4/260 (1%)
Query: 211 ENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
++A +F MT +P L+ ++ + + + + + +M +G N T + M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I C ++ A M K+ G++ + T +++ GLC+ G+ +A+ + ++E
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P + + ++NG C GK +A+ L+ M G +P ++ V +++ ++G+ A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LL++M + + V Y+ II GLC G + + +L + M G D +Y+ L++G+
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLC-KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 448 CEEGNVENVMQIAHEMVTKK 467
C G ++ ++ +M+ +K
Sbjct: 293 CYAGRWDDGAKLLRDMIKRK 312
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 28/256 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ D G + A+ F + ++ + + YN ++ + + + A + F + +
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGE---- 241
V PDV TY MI G CK G + A +F M PN YN +I +G+
Sbjct: 523 V-KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 242 ---LEEAKKC---------------MNEMMNRGCRPNELTYNAMIYGLCI--NGRVDEAK 281
+EE K+C + M+ G P+ T+ ++ C+ N V +A
Sbjct: 582 AKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAP 641
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L M+ G+K NV T+ +++KGL Q G L + E P+ + I+G
Sbjct: 642 TLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGL 701
Query: 342 CKIGKSDEAISLLKEM 357
CK AI LL++M
Sbjct: 702 CKQDLHGSAILLLRKM 717
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 16/147 (10%)
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV--- 222
G V ++++ A +++K PDV T+TT++R +C +E V+D T+
Sbjct: 592 GFSVDASTLRFALSTLARMLKAGH-EPDVFTFTTLLRPFC----LEENASVYDAPTLFKN 646
Query: 223 ------KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
KPN++ YNT+I G + + +++M RGC+PN +T + I GLC
Sbjct: 647 MKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDL 706
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSML 303
A +L+ KM + ++V+T K +L
Sbjct: 707 HGSAILLLRKMEND--NEDVTTKKKIL 731
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+ ++IN C+ K A S + ++ G +P +F+ + L G + A+ L+ +M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+M P ++ N ++ GLC+ G++ D L+DRM+ +G + Y +LK C+ G
Sbjct: 169 VEMGHKPTLITLNALVNGLCL-NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 453 VENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
M++ +M +K +L +K + ++D L
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSI--IIDGL 257
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 83/172 (48%), Gaps = 2/172 (1%)
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
K VS + + G+ + K D AV + + + P + + + + + + D +
Sbjct: 35 KGKVSYRERLRSGIVDI-KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLD 93
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
L K+M +G+ +++ + + +L A + ++ ++ P+ V+++T+I GLC
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ +GR+ + +LVDRM+ GH + L+ G C G V + + + MV
Sbjct: 154 L-EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 30/206 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG-------MIEN 212
+YN ++G L + S+ A+ F ++ +E+ P+ TY +IR + G +IE
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKM-EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 213 AKKV---FDVMTVK---------------PNLLAYNTMINGFC--KKGELEEAKKCMNEM 252
K+ D T++ P++ + T++ FC + + +A M
Sbjct: 588 IKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNM 647
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
G +PN +TYN +I GL + + ++ +M G + N T + + GLC
Sbjct: 648 KAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLH 707
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVI 338
A+ LR + N N DV + + ++
Sbjct: 708 GSAILLLRKM--ENDNEDVTTKKKIL 731
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 145/280 (51%), Gaps = 5/280 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ + + LA E + + E V PDV TY +++ GY + A+K+FDV
Sbjct: 187 TFNVLVDTFCKEGKV-LAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDV 245
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P++ +Y+ +ING+CK ++EAK+ NEM+++G PN ++YN +I+GLC GR
Sbjct: 246 MITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGR 305
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA+ L M NG N+ T+ +L G C G +A R + + P++ Y +
Sbjct: 306 LREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNI 365
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++N CK G +A L E+ GL+P V + + L + G LD A+ + M
Sbjct: 366 LVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDG 425
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
C P+ SYN II G K + V L+ M G D
Sbjct: 426 CPPDEFSYNVIIRGFLQHKDESRAVH-LIGEMRDRGFITD 464
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 169/348 (48%), Gaps = 11/348 (3%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAE 178
D+ + +I G A F K++E C + +Y++L+ L + + A
Sbjct: 79 DDYTYTTIINGLCKIGETALAAGLF---KKMEEAGCQLNVVTYSTLIHSLCKYRRVNEAL 135
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING 235
+ F + K + P + TYT++I+G C + A + + MT + PN++ +N +++
Sbjct: 136 DIFSYM-KAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDT 194
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
FCK+G++ A+ + M G P+ +TYN+++YG + V EA+ L M G K +
Sbjct: 195 FCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPD 254
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V ++ ++ G C + D+A ++ P+ SY +I+G C++G+ EA L K
Sbjct: 255 VFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFK 314
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
M G P ++++ + + G L +A L + M PN V YN ++ +C +
Sbjct: 315 NMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKS- 373
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G ++D +L + G + +Y+ ++ G C+EG ++ ++ M
Sbjct: 374 GNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNM 421
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 144/278 (51%), Gaps = 4/278 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELEEAK 246
+ P+ T +I +C++ ++ V + ++P ++ + T+ING K G+ +A
Sbjct: 6 LSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAV 65
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ ++M+ RGC+P++ TY +I GLC G A L KM G + NV T+ +++ L
Sbjct: 66 ELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSL 125
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C + ++A+ + +++P + +Y +I G C + EA +LL EM + + P V
Sbjct: 126 CKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNV 185
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+FN + + G++ A +LK M +M P+ V+YN+++ G M + + L D
Sbjct: 186 VTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWT-EVVEARKLFD 244
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
MI G D YS L+ GYC+ ++ Q+ +EM+
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMI 282
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 155/337 (45%), Gaps = 15/337 (4%)
Query: 63 YEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLS 122
Y + N +F + A + +P T YT++ L + S A++LL L+
Sbjct: 128 YRRVNEALDIFSYMKAKDISP-------TIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 123 DF----FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAE 178
+ L+ + G V AA ++ + +YNSL+ + A
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMING 235
+ F ++ + PDV +Y+ +I GYCK I+ AK++F+ M + PN ++YNT+I+G
Sbjct: 241 KLFDVMITKGC-KPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHG 299
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
C+ G L EA+ M G PN TY ++ G C G + +A L M+ K N
Sbjct: 300 LCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 359
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
+ + ++ +C G A + + P+V+ Y +ING CK G DEA+ +
Sbjct: 360 LVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFR 419
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
M G P FS+N + R +++ + RA+ L+ +M
Sbjct: 420 NMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEM 456
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++SY+ L+ + I A++ F++++ + P +VS Y T+I G C++G + A+ +F
Sbjct: 255 VFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVS-YNTLIHGLCQLGRLREAQDLF 313
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M PNL Y +++GFCK+G L +A + M + +PN + YN ++ +C +
Sbjct: 314 KNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKS 373
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + +A+ L +++ + G + NV + +++ GLC G D+A+ RN+ + PD SY
Sbjct: 374 GNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSY 433
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGL 362
V+I GF + A+ L+ EMR RG
Sbjct: 434 NVIIRGFLQHKDESRAVHLIGEMRDRGF 461
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 123/249 (49%), Gaps = 1/249 (0%)
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
++ + PN N +IN FC+ ++ + + + G +P +T+ +I GL G+
Sbjct: 2 ELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKF 61
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A L M G + + T+ +++ GLC +G+ A G + + EA +V +Y +
Sbjct: 62 AQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTL 121
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ CK + +EA+ + M+A+ + PT+F++ ++ + L A LL +M ++
Sbjct: 122 IHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNI 181
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+PN V++N ++ C +G++ E ++ M G D Y+ L+ GY V
Sbjct: 182 MPNVVTFNVLVDTFC-KEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240
Query: 458 QIAHEMVTK 466
++ M+TK
Sbjct: 241 KLFDVMITK 249
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G ++ A F N LY+Y LL + + A F + +
Sbjct: 296 LIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAM-QST 354
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
+ P++ Y ++ CK G +++A+++F V+ ++PN+ Y T+ING CK+G L+EA
Sbjct: 355 YLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEA 414
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ M + GC P+E +YN +I G + A L+ +MR GF + T
Sbjct: 415 LEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 1/179 (0%)
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M L G N T ++ C + + D L ++ + P + ++ +ING K+GK
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
+A+ L +M ARG +P +++ + L + GE A L K+M + C N V+Y+T
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+I LC + R+ + D+ M + Y+ L++G C + + +EM +
Sbjct: 121 LIHSLCKYR-RVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 174/335 (51%), Gaps = 10/335 (2%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+++ F + L+ + V AI+ F + +++ +++N L+ L RV + A E
Sbjct: 140 RINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFE 199
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMING 235
F + +P DV TY T+I G CK ++ ++F + + P+++ Y ++I+G
Sbjct: 200 VFKDMESFGCLP-DVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISG 258
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
FCK G+++EA EMM G +PN +T+N +I G G + EA+ + KM +
Sbjct: 259 FCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSAD 318
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V T S++ G C G+ + + + + N++P V +Y V+IN CK + +EA L
Sbjct: 319 VVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLG 378
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+++ + P F +N V + G +D ++LK+M + C P+ V++ +I G C+ K
Sbjct: 379 QIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCV-K 437
Query: 416 GRMQDVEDLVDRMIRSGHNLD----FTMYSCLLKG 446
GRM + ++ +RM+ + D ++ SCLLK
Sbjct: 438 GRMFEAINIFNRMLATRCAPDNITVNSLISCLLKA 472
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 154/318 (48%), Gaps = 11/318 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI+ G V A F K +E+ CL +YN+L+ L + N ++ E F +I
Sbjct: 184 LIRGLCRVGGVDRA---FEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQ 240
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ PD+ TYT++I G+CK G ++ A +F+ M ++PN++ +N +I+GF K G +
Sbjct: 241 SRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNI 300
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA+ +M C + +T+ ++I G C G+V+ M+ V T+ +
Sbjct: 301 AEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVL 360
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ LC + ++A +L + +++ P Y VI+GFCK G DE +LKEM +
Sbjct: 361 INALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRC 420
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P +F + G + AI + +M C P+ ++ N++I C+ K M +
Sbjct: 421 DPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLIS--CLLKAGMPNEA 478
Query: 423 DLVDRMIRSGHNLDFTMY 440
+ +M NL + +
Sbjct: 479 YRIRKMALEDRNLGLSSF 496
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 177/417 (42%), Gaps = 45/417 (10%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
I +VI NP F + S N N N + T + H L++I +
Sbjct: 42 IAFEVIKRFNNPKVGFKFLEF-SRLNLNVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMG 100
Query: 117 NSNKLSD-----FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ L D F ++ + +A D VK + Q K++ + + YN+LL VLV+
Sbjct: 101 SDGHLPDSKLLGFLVTWMAQA-SDFDMVKKLLAEV-QGKEVRINS--FVYNNLLSVLVKQ 156
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNT 231
N + A F K + VM P+ +N
Sbjct: 157 NQVHEAIYLF---------------------------------KEYLVMQSPPDTWTFNI 183
Query: 232 MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR-LN 290
+I G C+ G ++ A + +M + GC P+ +TYN +I GLC V L +++ +
Sbjct: 184 LIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRS 243
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
++ T+ S++ G C GK +A +M + + P+V ++ V+I+GF KIG EA
Sbjct: 244 DCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEA 303
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
++ ++M V +F ++ G+++ + M + P +Y +I
Sbjct: 304 EAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINA 363
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
LC + R+ + D + ++ S MY+ ++ G+C+ GNV+ I EM K+
Sbjct: 364 LC-KENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKR 419
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 164/341 (48%), Gaps = 38/341 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++L+ L + + A V PD+ TY+T+I G CK G + +A +F+
Sbjct: 221 TYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 280
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M+ P + YN++I G+C+ G+++EA + + +M++ C P+ +TY ++ C GR+D+
Sbjct: 281 MSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDD 340
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L +M N +V T S++ GLC G+ + A+ L + P + +Y V++
Sbjct: 341 AYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVD 400
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFN----------------------------- 370
G+CK + +A L+ + R+RG P ++N
Sbjct: 401 GYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPC 460
Query: 371 ----AVFRILVE----NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
A++ I+++ +G D A+ ++M Q +P ++ T++ LC A + Q
Sbjct: 461 PTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAH-QPQQAH 519
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+L++ MI+ GH ++ YC G ++ ++A E+
Sbjct: 520 ELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 183/375 (48%), Gaps = 21/375 (5%)
Query: 117 NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQ---AKQIENGACLYSYNSLLGVLVRVN 172
N DF +KL+ G ++ A+ + A+ + + L L + RV+
Sbjct: 142 NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVD 201
Query: 173 SIK-LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PNLL 227
+ L EE H+ + N + TY+ ++ G CK ++ A + + P+++
Sbjct: 202 DARELVEEMLHRGMAANAI-----TYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIV 256
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
Y+T+I+G CK G L +A EM C P +TYN++I G C G +DEA L+ KM
Sbjct: 257 TYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 313
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+ +V T+ +++ C +G+ D A + ++ ++PDV ++ +++G C G+
Sbjct: 314 VDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 373
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
++A+ LL+E+ RG PT++++N V ++ ++ +A L+ +PN V+YN +
Sbjct: 374 EDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNIL 433
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHN--LDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ G C A GR +D++ G MY+ +L C +G ++ +Q EM+
Sbjct: 434 VAGCCRA-GRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI- 491
Query: 466 KKGRLLKLKNFLTRV 480
++G + F T V
Sbjct: 492 QRGYVPAAATFATVV 506
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 173/344 (50%), Gaps = 15/344 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFF-----ISKLIKAYGDRGNVKAAIFWFHQA 149
Y+A+ D L + A +LL F S +I G ++ A+ F
Sbjct: 222 YSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF--- 278
Query: 150 KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
+++ +YNSL+G R + A ++V +N P DV TYTT++ +CKMG
Sbjct: 279 EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAP-DVITYTTLMSAFCKMGR 337
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+++A ++F M + P+++ + ++++G C +G +E+A + + E+ RGC P TYN
Sbjct: 338 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 397
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV-MEA 325
++ G C + +V +A+ L+A R GF N T+ ++ G C G+ DQA+ YL + E
Sbjct: 398 VVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 457
Query: 326 NMNP-DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
P V Y ++++ C+ G++D+A+ +EM RG P +F V L + + +
Sbjct: 458 GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQ 517
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
A LL++M + P + + ++ C A G +Q ++L +
Sbjct: 518 AHELLEEMIKYGHTPGPGTCDAVVSAYCRA-GMIQKADELASEL 560
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 148/280 (52%), Gaps = 8/280 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM--TVKPNLLAYNTMINGFCKKGELEEAKKCM 249
P + +I G C+ G + +A V+ M P+ L Y +++G K G L +A + +
Sbjct: 113 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVL 172
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
EM++ P+ T ++ LC+ RVD+A+ L+ +M G N T+ +++ GLC
Sbjct: 173 QEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKC 232
Query: 310 GKFDQAVG-YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+ D+AV L V PD+ +Y VI+G CK G+ +A+ + +EM PT +
Sbjct: 233 ERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSC---APTAIT 289
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N++ G++D AI LL +M +C P+ ++Y T++ C GR+ D +L +M
Sbjct: 290 YNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFC-KMGRLDDAYELFQQM 348
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ + + D ++ L+ G C EG +E+ +++ E +T++G
Sbjct: 349 VANKLSPDVVTFTSLVDGLCGEGRMEDALELLEE-ITRRG 387
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 168/344 (48%), Gaps = 39/344 (11%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N ++G L R ++ A + Q+ + PPD TYT ++ G K G + +A +V M
Sbjct: 118 HNVVIGGLCRAGRLRHALGVYRQM--NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEM 175
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
P+ ++ C +++A++ + EM++RG N +TY+A++ GLC R+
Sbjct: 176 VSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERL 235
Query: 278 DEA-KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF------------------------ 312
DEA +L+ ++ GF ++ T+ +++ GLC G+
Sbjct: 236 DEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIG 295
Query: 313 --------DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
D+A+ L +++ N PDV +Y +++ FCK+G+ D+A L ++M A L P
Sbjct: 296 GYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 355
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
V +F ++ L G ++ A+ LL+++ + C P +YN ++ G C + +++ E+L
Sbjct: 356 DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSN-QVRKAEEL 414
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
V G + Y+ L+ G C G + +Q ++ ++ G
Sbjct: 415 VADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGG 458
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 142/283 (50%), Gaps = 8/283 (2%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV--KPNLLAYNTMINGFCKKGEL 242
+++ + PD T++ C A +FD M N Y +I+ CK L
Sbjct: 37 IRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLL 96
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+EA + +M +RG P L +N +I GLC GR+ A + +M + + T+ +
Sbjct: 97 DEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKL 155
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GL G+ AV L+ ++ A PD + VV+ C + D+A L++EM RG+
Sbjct: 156 VHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGM 215
Query: 363 KPTVFSFNAVFRILVENGELDRAI-LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+++A+ L + LD A+ LLL ++ + P+ V+Y+T+I GLC A GR++D
Sbjct: 216 AANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKA-GRLRDA 274
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D+ + M + + Y+ L+ GYC G+++ +++ +MV
Sbjct: 275 VDIFEEMSCAPTAI---TYNSLIGGYCRAGDMDEAIRLLGKMV 314
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 41/271 (15%)
Query: 128 KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
LI Y G++ AI + + +Y +L+ ++ + A E F Q+V
Sbjct: 292 SLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVA- 350
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEE 244
N + PDV T+T+++ G C G +E+A ++ + +T + P + YN +++G+CK ++ +
Sbjct: 351 NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRK 410
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYG---------------------------------- 270
A++ + + +RG PN +TYN ++ G
Sbjct: 411 AEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAII 470
Query: 271 ---LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
LC +GR D+A +M G+ +T +++ LC + QA L +++
Sbjct: 471 LDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGH 530
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
P + + V++ +C+ G +A L E+R
Sbjct: 531 TPGPGTCDAVVSAYCRAGMIQKADELASELR 561
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 113/236 (47%), Gaps = 4/236 (1%)
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++E+ +RG P+ + N ++ LC A L KM G N +T+ +++ LC
Sbjct: 34 LDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAV-NHTTYYNLIHPLCK 92
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
D+A+G L ++ MNP + VVI G C+ G+ A+ + ++M P +
Sbjct: 93 ARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLT 151
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ + L + G L A+ +L++M +P+ + ++ LC+ R+ D +LV+ M
Sbjct: 152 YTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGD-RVDDARELVEEM 210
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
+ G + YS L+ G C+ ++ + + VT++G + + T V+D L
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYST-VIDGL 265
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKEN-VVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+YN L+ R A ++ Q+ E P V+ Y ++ C+ G ++A + ++
Sbjct: 429 TYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYE 488
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + P + T++ CK + ++A + + EM+ G P T +A++ C G
Sbjct: 489 EMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAG 548
Query: 276 RVDEAKMLMAKMRLNGFKDNVST 298
+ +A L +++RL + D S+
Sbjct: 549 MIQKADELASELRL--YTDKSSS 569
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 80/200 (40%), Gaps = 39/200 (19%)
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDE-AISLLKEMRARGLKPTVFSFN---------- 370
+++A D ++ VV+ G K LL E+R RGL P N
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60
Query: 371 ------AVFRILVENGE------------------LDRAILLLKQMPQMDCLPNFVSYNT 406
A+F + E G LD A+ LL M P + +N
Sbjct: 61 DTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNV 120
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+I GLC A GR++ V R + H DF Y+ L+ G + G + + +Q+ EMV+
Sbjct: 121 VIGGLCRA-GRLRHALG-VYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVS- 177
Query: 467 KGRLLKLKNFLTRVVDALLL 486
R + LT VV +L L
Sbjct: 178 -ARHVPDNTTLTVVVQSLCL 196
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 160/305 (52%), Gaps = 5/305 (1%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD--- 218
N L+ ++ I A F +I+K P+ T+TT+I+G C G I A D
Sbjct: 126 NILINCFCQLGLIPFAFSVFAKILKMGY-NPNTITFTTLIKGLCLKGQIHQALNFHDKLV 184
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ + N ++Y T+I+G CK GE A + + + +PN + Y+ +I G+C + V+
Sbjct: 185 ALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVN 244
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A L ++M G NV T+ +++ G VGK AV ++ N+ PDV ++ +++
Sbjct: 245 DAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILV 304
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
+ FCK GK A+ L+ EM RG P + +++++ L + +D+A+ LL ++
Sbjct: 305 DVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIR 364
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
PN +Y +I GLC + G+++D ++ + ++ G+++ Y + G+C++G +
Sbjct: 365 PNMHTYTILIDGLCTS-GKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASA 423
Query: 459 IAHEM 463
+ +M
Sbjct: 424 LLSKM 428
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 194/410 (47%), Gaps = 24/410 (5%)
Query: 21 VTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWA-- 78
V S+ L QNP+P P +F+ LGS + +K YH + + +
Sbjct: 68 VDDAVSLFNCLLRQNPTP------PAIEFNKILGSLVKSK-------HYHTVLYLSKKME 114
Query: 79 -SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRG 137
PN + C+ + + + S+ + + N N ++ + LIK +G
Sbjct: 115 FRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTIT---FTTLIKGLCLKG 171
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
+ A+ + + + SY +L+ L +V + A + + V +V P+V Y
Sbjct: 172 QIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRR-VDGKLVQPNVVMY 230
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+T+I G CK + +A ++ M K PN++ Y+ +I+GF G+L++A N+M++
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+P+ T+N ++ C +G++ A L+ +M G N+ T+ S+L LC + D+
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDK 350
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
AV L + + + P++ +Y ++I+G C GK ++A ++ +++ +G TV ++ +F
Sbjct: 351 AVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFY 410
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ G D A LL +M + C+P+ +Y I L KG E L
Sbjct: 411 GFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSL-FKKGENDMAEKL 459
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 113/200 (56%), Gaps = 4/200 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++L+ V +K A + F++++ EN+ PDV T+ ++ +CK G I A K+ D
Sbjct: 264 TYSALISGFFTVGKLKDAVDLFNKMISENI-KPDVYTFNILVDVFCKSGKISYALKLVDE 322
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + PN++ Y+++++ CK +++A + ++ ++G RPN TY +I GLC +G+
Sbjct: 323 MHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGK 382
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+++A+ + + + G+ V T+ M G C G FD+A L + E PD K+YE+
Sbjct: 383 LEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYEL 442
Query: 337 VINGFCKIGKSDEAISLLKE 356
+ K G++D A L +E
Sbjct: 443 IKLSLFKKGENDMAEKLHRE 462
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 114/244 (46%), Gaps = 1/244 (0%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
K NL+ Y++ F ++++A N ++ + P + +N ++ L +
Sbjct: 49 KINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLY 108
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L KM G K N+ ++ C +G A +++ NP+ ++ +I G C
Sbjct: 109 LSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLC 168
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
G+ +A++ ++ A G + S+ + L + GE A+ LL+++ PN V
Sbjct: 169 LKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVV 228
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
Y+TII G+C K + D DL M+ G + + YS L+ G+ G +++ + + ++
Sbjct: 229 MYSTIIDGMCKDK-HVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNK 287
Query: 463 MVTK 466
M+++
Sbjct: 288 MISE 291
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 201/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + ++ L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ +CK G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + + M G +P+ T++ +I GLC ++D+A L +M NG N
Sbjct: 182 IKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ R ++ ++ PD+ +Y +I G CK G + L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + +Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 154/284 (54%), Gaps = 6/284 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G ++ A F + + S+N+L+ +++ L E F
Sbjct: 137 YFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGD--LDEGFRLK 194
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKK 239
+++ + V PDV T++ +I G CK +++A ++FD M + PN + + T+I+G CK
Sbjct: 195 SVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKN 254
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + + L+ +M + G K + T+
Sbjct: 255 GRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITY 314
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G + A Y + +++ N+ D +Y +I+G C+ G+S +A +L+EM +
Sbjct: 315 TTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLS 374
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GLKP + ++ + + G++ LLK+M + PN V+
Sbjct: 375 VGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXVT 418
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 160/316 (50%), Gaps = 5/316 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI+ + K A ++ + + + ++N L+ + + + A+ +
Sbjct: 274 FTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVL-K 332
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+ E V PDV TY++++ GY + A+K+FD M K P++ +YN +ING+CK
Sbjct: 333 TMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVK 392
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++EAK+ NEM+++G PN ++YN +I+GLC G + EA+ L M NG N+ T+
Sbjct: 393 RIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYS 452
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+L G C G F +A R + P++ Y ++I+ CK G +A L E+ +
Sbjct: 453 ILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK 512
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GL+P + + L + G LD A+ + M + C P+ +SYN II G K +
Sbjct: 513 GLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRA 572
Query: 421 VEDLVDRMIRSGHNLD 436
V+ L+ M G D
Sbjct: 573 VQ-LIGEMRDKGFIAD 587
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 161/311 (51%), Gaps = 5/311 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ + L+ + + LA +I+K + P + T+TT+I CK+G A ++F
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGL-QPTIVTFTTLINWLCKVGKFAQAMELF 191
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M + P++ Y T+ING CK GE A + +M GC+PN +TY+ +I +
Sbjct: 192 DDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKD 251
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
RV+EA + + M++ G ++ T+ S+++GLC ++ +A L + N+ PD+ ++
Sbjct: 252 RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTF 311
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+++ CK GK EA +LK M G++P V +++++ E+ A L M
Sbjct: 312 NVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMIT 371
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C P+ SYN +I G C K R+ + + L + MI G + Y+ L+ G C+ G++
Sbjct: 372 KGCKPDVFSYNILINGYCKVK-RIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLR 430
Query: 455 NVMQIAHEMVT 465
+ M T
Sbjct: 431 EARNLFKNMHT 441
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 156/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y +++ L ++ A ++ +E P+V TY+T+I + K + A +F
Sbjct: 203 VYTYTTIINGLCKIGETAAAAGLLKKM-EEAGCQPNVVTYSTIIDSHRKDRRVNEALDIF 261
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M VK P++ YN++I G C + +EA +NEM + P+ +T+N ++ +C
Sbjct: 262 SYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKE 321
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+V EA+ ++ M G + +V T+ S++ G + + +A ++ PDV SY
Sbjct: 322 GKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSY 381
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++ING+CK+ + DEA L EM +GL P S+N + L + G L A L K M
Sbjct: 382 NILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHT 441
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
LPN +Y+ ++ G C +G L M + + MY+ L+ C+ GN+
Sbjct: 442 NGNLPNLFTYSILLDGFC-KQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLR 500
Query: 455 NVMQIAHEMVTK 466
+ ++ E+ K
Sbjct: 501 DARKLFSELFVK 512
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 160/320 (50%), Gaps = 8/320 (2%)
Query: 150 KQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
K++E C + +Y++++ + + A + F +K + PD+ TY ++I+G C
Sbjct: 227 KKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIF-SYMKVKGISPDIFTYNSLIQGLCN 285
Query: 207 MGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+ A + + M + P+++ +N +++ CK+G++ EA+ + M G P+ +T
Sbjct: 286 FSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVT 345
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y++++YG + V EA+ L M G K +V ++ ++ G C V + D+A ++
Sbjct: 346 YSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMI 405
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ P+ SY +I+G C++G EA +L K M G P +F+++ + + G
Sbjct: 406 HQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFG 465
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+A L + M PN V YN +I +C + G ++D L + G + +Y+ +
Sbjct: 466 KAFRLFRAMQSTYSKPNLVMYNILIDAMCKS-GNLRDARKLFSELFVKGLQPNAQIYTTI 524
Query: 444 LKGYCEEGNVENVMQIAHEM 463
+ G C+EG ++ ++ M
Sbjct: 525 INGLCKEGLLDEALEAFRNM 544
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 140/279 (50%), Gaps = 5/279 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK 247
P + +T ++ KMG + K ++ + PN+ + +IN F ++ A
Sbjct: 95 PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ +++ G +P +T+ +I LC G+ +A L M G + +V T+ +++ GLC
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
+G+ A G L+ + EA P+V +Y +I+ K + +EA+ + M+ +G+ P +F
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIF 274
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++N++ + L + A LL +M ++ +P+ V++N ++ +C +G++ + + ++
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTIC-KEGKVSEAQGVLKT 333
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M G D YS L+ GY V ++ M+TK
Sbjct: 334 MTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G+++ A F N L++Y+ LL + A F + ++
Sbjct: 419 LIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLF-RAMQST 477
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P++ Y +I CK G + +A+K+F + VK PN Y T+ING CK+G L+EA
Sbjct: 478 YSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEA 537
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ M GC P+E++YN +I G + A L+ +MR GF +V T
Sbjct: 538 LEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 187/410 (45%), Gaps = 37/410 (9%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLIS---------IAASLLKNSNKLSDF 124
FF WA + Y+H T Y + +VL +AA + N+ +
Sbjct: 3 FFQWAGSQV----HYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYG-Y 57
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENG----AC---LYSYNSLLGVLVRVNSIKLA 177
+ L +A F +A+ + G C ++SY+ L+ L R + A
Sbjct: 58 LLRSLCQAQ-----------RFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEA 106
Query: 178 EEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMIN 234
E ++++ + P+V TY +++ G CKMG ++ A +F M + P+ + YN +I+
Sbjct: 107 AELLNEMI-DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLID 165
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
GF KKG++ EA + EM+ +GC P TYN+++ G G + L M G
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N+ T ++L G C +G +A + PDV SY +I G C GK EA LL
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLL 285
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
+EM G+ P + S+N + ++G LD AI L ++P+ P+ SY+TII LC A
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G++ + MI +G D + L+ G C + ++ MV
Sbjct: 346 -GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 161/324 (49%), Gaps = 40/324 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y SLL L ++ +K A + F ++V PPD Y +I G+ K G + A ++F+
Sbjct: 124 TYGSLLSGLCKMGKLKEAVDLFSRMVYRGC-PPDGVVYNVLIDGFSKKGDMGEAYRLFEE 182
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P + YN++++GF +KGE + +M+ +GC PN T+N ++ G C G
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L +MR G +V ++ ++++G+C GK +A LR ++ + + PD+ SY +
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA----------------VFRILVENG 380
+I+G+ K G D AI L E+ GL+P FS++ VF+ ++ NG
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Query: 381 EL-DRAIL------------------LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
D A++ L + M + +C+P YN ++ LC AK R DV
Sbjct: 363 SAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAK-RSDDV 421
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLK 445
++ + G + D + +L+
Sbjct: 422 CEIFHELTERGFSPDVEISKVILE 445
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 4/231 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++N+LL ++ + A F ++ + PPDV +Y T+IRG C G A+++
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEM-RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLL 285
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V P++++YN +I+G+ K G L+ A K E+ G P+ +Y+ +I LC
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+V A ++ M NG + + ++ GLC + ++ + +++ P + Y
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+++ CK +SD+ + E+ RG P V + L + + D A
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAA 456
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
++ +L+ L G+ D G +++ A P+ +Y ++ C+ + +EA S+ + M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
A+G P VFS++ + L ++D A LL +M PN V+Y +++ GLC G+
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC-KMGK 137
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+++ DL RM+ G D +Y+ L+ G+ ++G++ ++ EM+ K
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 159/306 (51%), Gaps = 4/306 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN LL L + + A + ++ + P DVS YTT+I CK+G ++ A+++
Sbjct: 179 VFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVS-YTTVISSMCKLGDVDKAREL- 236
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
M +P + YN +I+G CK+ +EA MNEM++RG PN ++Y+ +I L G V
Sbjct: 237 -AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNV 295
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+ + + +M + G + NV T S++KG V G+ AVG ++ ++P+V +Y +
Sbjct: 296 ELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTL 355
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G C G DEAIS+ +M ++P V +++ + ++G+L A +M C
Sbjct: 356 IHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGC 415
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN V Y ++ LC DL+D MI G ++ +KG C G VE M
Sbjct: 416 RPNVVVYTCMVDVLCQM-SMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAM 474
Query: 458 QIAHEM 463
+ +M
Sbjct: 475 NVLDQM 480
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 159/313 (50%), Gaps = 5/313 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ + + K A + +++V V P+V +Y+T+I MG +E + VF M
Sbjct: 247 YNALIHGVCKECRFKEAFDLMNEMVDRGV-DPNVISYSTVISCLSDMGNVELSLAVFGRM 305
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V+ PN+ + ++I GF +G + +A N M+ G PN + YN +I+GLC +G +
Sbjct: 306 FVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNM 365
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DEA + +M + + NV+T+ +++ G G A ++ P+V Y +
Sbjct: 366 DEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCM 425
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++ C++ D+A L+ M + G PTV +FN + L G ++ A+ +L QM + +C
Sbjct: 426 VDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYEC 485
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
LPN +YN ++ GL A ++ L+ + D Y+ ++ G+ G + V+
Sbjct: 486 LPNIRTYNELLDGLFRANA-FREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVL 544
Query: 458 QIAHEMVTKKGRL 470
Q+ +M+ +L
Sbjct: 545 QLLGKMLVNGIKL 557
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 181/387 (46%), Gaps = 54/387 (13%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLL-GVLVRVNSIKLAEEFFHQIV 185
S +I D GNV+ ++ F + + ++ SL+ G VR + A ++ ++
Sbjct: 283 STVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVR-GRVGDAVGLWNLMI 341
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGEL 242
+E V P+V Y T+I G C G ++ A V++ M +++PN+ Y+T+I GF K G+L
Sbjct: 342 REGV-SPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDL 400
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
A + N+M+N GCRPN + Y M+ LC D+A L+ M +G V T +
Sbjct: 401 VSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNF 460
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+KGLC G+ + A+ L + + P++++Y +++G + EA L++E+ R +
Sbjct: 461 IKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKV 520
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+ DC V+YNTI+ G G Q V
Sbjct: 521 -------------------------------EFDC----VTYNTIMYGFSF-NGMHQQVL 544
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVD 482
L+ +M+ +G LD + + YC+ G V+ +++ + + K F ++
Sbjct: 545 QLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAE-------KEFRADIIT 597
Query: 483 ALLLMWIVTGGSWISR---FVFVHQVV 506
+++W + +W+ V++H+++
Sbjct: 598 HTIILWGIC--NWLGTEEAVVYLHEML 622
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 170/384 (44%), Gaps = 43/384 (11%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKA 141
+PN Y C + + +V LS +++ + + + + LIK + RG V
Sbjct: 276 DPNVISYSTVISCLSDMGNVELS---LAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGD 332
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ ++ + + +YN+L+ L ++ A ++Q+ K+++ P+V+TY+T+I
Sbjct: 333 AVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSI-RPNVTTYSTII 391
Query: 202 RGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
G+ K G + +A + ++ M +PN++ Y M++ C+ ++A ++ M++ GC
Sbjct: 392 YGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCP 451
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P +T+N I GLC GRV+ A ++ +M N+ T+ +L GL F +A G
Sbjct: 452 PTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGL 511
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+R + E + D +Y ++ GF G + + LL +M G+K + N +
Sbjct: 512 IRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCK 571
Query: 379 NGEL------------------------------------DRAILLLKQMPQMDCLPNFV 402
G++ + A++ L +M + PN
Sbjct: 572 LGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIA 631
Query: 403 SYNTIICGLCMAKGRMQDVEDLVD 426
++N ++ G G M + L D
Sbjct: 632 TWNVLVRGFFSKLGHMGPIRILDD 655
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 14/312 (4%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLI 130
A+ +N +PN + T + +D + + IS+ + K+S + + S +I
Sbjct: 333 AVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEA-ISVWNQMEKDSIRPNVTTYSTII 391
Query: 131 KAYGDRGN-VKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ G+ V A W ++ N C + Y ++ VL +++ A + ++
Sbjct: 392 YGFAKSGDLVSACETW----NKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMIS 447
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ PP V T+ I+G C+ G +E A V D M PN+ YN +++G +
Sbjct: 448 DGC-PPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFR 506
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + E+ R + +TYN ++YG NG + L+ KM +NG K + T + +
Sbjct: 507 EACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTV 566
Query: 304 KGLCVVGKFDQAVGYLRNV-MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
C +GK A+ L N+ E D+ ++ +++ G C ++EA+ L EM RG+
Sbjct: 567 NAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGI 626
Query: 363 KPTVFSFNAVFR 374
P + ++N + R
Sbjct: 627 FPNIATWNVLVR 638
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 141/340 (41%), Gaps = 34/340 (10%)
Query: 157 CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
C S + ++ VL + + I + E+F + TY TMI + ++ +
Sbjct: 37 CPVSESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYL 96
Query: 217 FDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
M V + + +I + + E+ K + GC P+ YN ++ L
Sbjct: 97 LQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLS 156
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
L M+ G + NV T+ +LK LC GK D A L + +PD S
Sbjct: 157 QNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVS 216
Query: 334 YEVVINGFCKIGKSD------------------------------EAISLLKEMRARGLK 363
Y VI+ CK+G D EA L+ EM RG+
Sbjct: 217 YTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVD 276
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V S++ V L + G ++ ++ + +M C PN ++ ++I G +GR+ D
Sbjct: 277 PNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGF-FVRGRVGDAVG 335
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L + MIR G + + Y+ L+ G C +GN++ + + ++M
Sbjct: 336 LWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQM 375
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 6/209 (2%)
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
+ LTY MI L N +D L+ +M+L + + ++K +Q +
Sbjct: 71 KHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLK 130
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
+ E P VK Y +V++ +L M++ GL+P VF++N + + L
Sbjct: 131 MFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALC 190
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+NG++D A LL +M C P+ VSY T+I +C ++ DV+ R +
Sbjct: 191 QNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMC----KLGDVDKA--RELAMKFEPVV 244
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+Y+ L+ G C+E + + +EMV +
Sbjct: 245 PVYNALIHGVCKECRFKEAFDLMNEMVDR 273
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 171/331 (51%), Gaps = 30/331 (9%)
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT------VKPNL 226
S+ A +FF +++ + ++ ++ G K IE+ +VF + + P+L
Sbjct: 76 SVTQAHQFFDLMMR------SIFSFNRLLAGLAK---IEHYSQVFSLYKQMHLAGLWPDL 126
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
L N +IN C + E M +M RG P+ +T+ +I GLC+ R+ EA L +
Sbjct: 127 LTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMR 186
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA------NMNPDVKSYEVVING 340
M+ G NV T+ +++KGLC +G + A+ + + ++ N P+V SY ++I+G
Sbjct: 187 MQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDG 246
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CK+G +EAI L EM +G++P V +F+ + +L + G++ +A LL+ M Q+ +PN
Sbjct: 247 LCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPN 306
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+Y ++I G C+ G + ++L M G+ D Y+ L+ GYC+ VE M++
Sbjct: 307 LFTYTSLIKGFCLV-GDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLF 365
Query: 461 HEM--------VTKKGRLLKLKNFLTRVVDA 483
+EM V G LLK +V DA
Sbjct: 366 NEMLHVGMWPDVKTSGVLLKALFLAGKVDDA 396
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 183/346 (52%), Gaps = 5/346 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I GN + AI F++ + +++ L+ +L + + A++ +++
Sbjct: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQ 300
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+VP ++ TYT++I+G+C +G + +AK++F M K P++++YN +ING+CK ++E
Sbjct: 301 IGIVP-NLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVE 359
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA K NEM++ G P+ T ++ L + G+VD+AK L ++ ++ L
Sbjct: 360 EAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFL 419
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GLC G +A+ + NM D++++ +I+G CK GK + A L +++ G++
Sbjct: 420 DGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQ 479
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +++++ + G++D+A +L ++M + C P+ ++Y+ ++ G +++ V
Sbjct: 480 PDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGF-YESNKLEKVVQ 538
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
L+ RMI D +Y+ + C++ + + + +K R
Sbjct: 539 LLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQKHR 584
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 161/318 (50%), Gaps = 21/318 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD- 218
++ +L+ L + I A + F ++ K P +V TY T+I+G C +G I A K
Sbjct: 163 TFTTLIKGLCVEHRIIEATKLFMRMQKLGCTP-NVVTYGTLIKGLCALGNINIALKWHQE 221
Query: 219 --------VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
V +PN+++Y+ +I+G CK G EEA NEM+++G +PN +T++ +I
Sbjct: 222 MLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDM 281
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC G+V +AK L+ M G N+ T+ S++KG C+VG + A ++ PD
Sbjct: 282 LCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPD 341
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V SY ++ING+CK K +EA+ L EM G+ P V + + + L G++D A L +
Sbjct: 342 VISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFR 401
Query: 391 QMPQMDCLPNFVSYNTIIC-----GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ P + + IC GLC G + + L + + LD + CL+
Sbjct: 402 VIK-----PYAMPKDLCICCIFLDGLC-KNGYIFEAMKLFNELESYNMKLDIETFGCLID 455
Query: 446 GYCEEGNVENVMQIAHEM 463
G C+ G +E ++ ++
Sbjct: 456 GLCKAGKLETAWELFEKL 473
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 147/266 (55%), Gaps = 10/266 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++++L+ V+ + AE+ + ++VK ++ P + TY+++I G+C ++ AK++F
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K P+++ YNT+I GFCK +EE + EM RG N +TYN +I GL
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A+ + +M +G N+ T+ ++L GLC GK ++A+ + + M P + +Y
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I G CK GK ++ L + +G+KP V ++N + G + A L K+M +
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQD 420
LPN YNT+I + R++D
Sbjct: 565 DGTLPNSGCYNTLI------RARLRD 584
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 169/341 (49%), Gaps = 5/341 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
SKL+ A I Q + + Y+Y+ L+ R + + LA +++
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGEL 242
K P++ T ++++ GYC I A + D M V +PN + +NT+I+G +
Sbjct: 144 KLGY-EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA ++ M+ +GC+P+ +TY ++ GLC G D A L+ KM + V + ++
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC D A+ + + + P+V +Y +I+ C G+ +A LL +M R +
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P VF+F+A+ V+ G+L A L +M + P+ V+Y+++I G CM R+ + +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM-HDRLDEAK 381
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ + M+ D Y+ L+KG+C+ VE M++ EM
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 162/307 (52%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L A ++ E + PDV T++ +I + K G + A+K++D
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ P+++ Y+++INGFC L+EAK+ M+++ C P+ +TYN +I G C R
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+E + +M G N T+ +++GL G D A + ++ + P++ +Y
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G CK GK ++A+ + + ++ ++PT++++N + + + G+++ L +
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+YNT+I G C KG ++ + L M G + Y+ L++ +G+ E
Sbjct: 532 VKPDVVAYNTMISGFC-RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 457 MQIAHEM 463
++ EM
Sbjct: 591 AELIKEM 597
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 144/277 (51%), Gaps = 4/277 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
P+ T+ T+I G A + D M K P+L+ Y ++NG CK+G+ + A
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+N+M P L YN +I GLC +D+A L +M G + NV T+ S++ LC
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G++ A L +++E +NPDV ++ +I+ F K GK EA L EM R + P++ +
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++++ + LD A + + M C P+ V+YNT+I G C K R+++ ++ M
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREM 422
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ G + Y+ L++G + G+ + +I EMV+
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 160/310 (51%), Gaps = 7/310 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ LL + ++N + Q+ +N+ +P + TY+ +I +C+ + A V
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQM--QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +PN++ ++++NG+C + EA +++M G +PN +T+N +I+GL ++ +
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
EA L+ +M G + ++ T+ ++ GLC G D A L + + + P V Y
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G CK D+A++L KEM +G++P V +++++ L G A LL M +
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ +++ +I + +G++ + E L D M++ + YS L+ G+C ++
Sbjct: 322 INPDVFTFSALIDAF-VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 457 MQIAHEMVTK 466
Q+ MV+K
Sbjct: 381 KQMFEFMVSK 390
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 158/301 (52%), Gaps = 5/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y ++ L + LA +++ ++ + P V Y T+I G CK +++A +F
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++PN++ Y+++I+ C G +A + +++M+ R P+ T++A+I
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++ EA+ L +M ++ T+ S++ G C+ + D+A ++ + PDV +Y
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I GFCK + +E + + +EM RGL ++N + + L + G+ D A + K+M
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN ++YNT++ GLC G+++ + + + RS Y+ +++G C+ G VE
Sbjct: 460 DGVPPNIMTYNTLLDGLC-KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 455 N 455
+
Sbjct: 519 D 519
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 166/341 (48%), Gaps = 17/341 (4%)
Query: 136 RGNVKA-----AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKL--AEEFFHQIVKEN 188
RGN + FW ++ +G Y Y L ++ +KL A F ++VK
Sbjct: 22 RGNAATVSPSFSFFW----RRAFSGKTSYDYREKLS-RNGLSELKLDDAVALFGEMVKSR 76
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P + ++ ++ KM + + + M + N Y+ +IN FC++ +L A
Sbjct: 77 PFPS-IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLA 135
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +MM G PN +T ++++ G C + R+ EA L+ +M + G++ N T +++ G
Sbjct: 136 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L + K +A+ + ++ PD+ +Y VV+NG CK G +D A +LL +M L+P
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 255
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V +N + L + +D A+ L K+M PN V+Y+++I LC GR D L+
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-NYGRWSDASRLL 314
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI N D +S L+ + +EG + ++ EMV +
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 148/335 (44%), Gaps = 44/335 (13%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSD--FFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+++ L ++ S A+ LL + K++ F S LI A+ G + A + +
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +Y+SL+ + + A++ F +V ++ P DV TY T+I+G+CK +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP-DVVTYNTLIKGFCKYKRV 412
Query: 211 ENAKKVFDVMT--------------------------------------VKPNLLAYNTM 232
E +VF M+ V PN++ YNT+
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
++G CK G+LE+A + P TYN MI G+C G+V++ L + L G
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
K +V + +M+ G C G ++A + + E P+ Y +I + G + +
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 592
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
L+KEMR+ G + V +L +G LD++ L
Sbjct: 593 LIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSFL 626
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 144/279 (51%), Gaps = 4/279 (1%)
Query: 191 PPDVSTYTTMIRGYCKM---GMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK 247
PP +T ++ KM + + D + P++ N +IN FC L A
Sbjct: 109 PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFS 168
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ +++ GC+P+ T+N +I GLC+ G++ EA L K GF+ +V T+ +++ GLC
Sbjct: 169 VLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLC 228
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
VG A+ LR++++ N P+V +Y +I+ CK + EA +L EM +G+ P +F
Sbjct: 229 KVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIF 288
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++N++ L E LL +M +PN V ++T++ LC +G + D+VD
Sbjct: 289 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC-KEGMIAIAHDVVDM 347
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI+ G D Y+ L+ G+C ++ +++ MV K
Sbjct: 348 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 386
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 156/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ N L+ + + A +++K PD +T+ T+IRG C G I A +F
Sbjct: 147 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGC-QPDNTTFNTLIRGLCVEGKIGEALHLF 205
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D +P+++ Y T++NG CK G A + + M+ + CRPN + YN +I LC +
Sbjct: 206 DKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 265
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+V EA L ++M G ++ T+ S++ LC + ++ L ++ + + P+V +
Sbjct: 266 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 325
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V++ CK G A ++ M RG++P V ++ A+ E+D A+ + M
Sbjct: 326 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 385
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C+PN SYN +I G C + RM L+++M G D Y+ L+ G C G ++
Sbjct: 386 KGCVPNVRSYNILINGYCQIQ-RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 444
Query: 455 NVMQIAHEMVTK 466
+ + + HEMV
Sbjct: 445 HAIALFHEMVAS 456
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 149/299 (49%), Gaps = 5/299 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
GN AAI Q + +YN+++ L + + A F +++ + + PD+ T
Sbjct: 231 GNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGI-SPDIFT 289
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y ++I C + ++ + + M + PN++ ++T+++ CK+G + A ++ M+
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG P+ +TY A++ G C+ +DEA + M G NV ++ ++ G C + + D
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 409
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+G L + + D +Y +I+G C +G+ AI+L EM A G P + ++ +
Sbjct: 410 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 469
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L +N L A++LLK + + + + YN I G+C A G ++ DL + G
Sbjct: 470 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA-GELEAARDLFSNLSCQG 527
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A+ ++ + P + ++ K+ +SL +M + G+ P V++ N
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L A +L ++ ++ C P+ ++NT+I GLC+ +G++ + L D+ I
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCV-EGKIGEALHLFDKTIGE 211
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
G D Y L+ G C+ GN +++ MV K R
Sbjct: 212 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCR 249
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 8/205 (3%)
Query: 95 YTAITDVLLSHSLISIAAS----LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
++ + D L +I+IA ++K + + L+ + R + A+ F
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 384
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ SYN L+ ++ + A Q+ + ++ D TY T+I G C +G +
Sbjct: 385 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIA-DTVTYNTLIHGLCHVGRL 443
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
++A +F M P+L+ Y +++ CK L EA + + + L YN
Sbjct: 444 QHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIA 503
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGF 292
I G+C G ++ A+ L + + GF
Sbjct: 504 IDGMCRAGELEAARDLFSNLSCQGF 528
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 159/310 (51%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN LL K A F ++ ++ V PDV TY T++ CK G A+KVFD
Sbjct: 243 TYNCLLHGYCSSGKPKEAIGIFRKMCRDGV-EPDVVTYNTLMVYLCKNGRSMEARKVFDS 301
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+ Y T+++G+ +G L + + ++ M+ G +P+ +N +I +G
Sbjct: 302 MVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGM 361
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA + +KMR G N+ T+ +++ LC VGK D A+ ++ + P+ +
Sbjct: 362 VDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRT 421
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C K D+A L EM RG+ P FN + L + G + RA + M ++D
Sbjct: 422 LIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD 481
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+ ++Y T+I G C+ G++ + L++ M+ G + Y+ ++ GYC+ G +E+
Sbjct: 482 VQCDVITYTTLIDGYCL-DGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDA 540
Query: 457 MQIAHEMVTK 466
+ +M +K
Sbjct: 541 CSLFRQMASK 550
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 151/312 (48%), Gaps = 7/312 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENV---VPPDVSTYTTMIRGYCKMGMIENAKK 215
+SYN LL L N + A H ++ ++ PPDV +YTT+I G + G ++ A
Sbjct: 168 FSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYC 227
Query: 216 VFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+FD M + PN + YN +++G+C G+ +EA +M G P+ +TYN ++ LC
Sbjct: 228 LFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLC 287
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
NGR EA+ + M G K + S + ++L G G Q L ++ PD
Sbjct: 288 KNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHY 347
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+ ++I + K G DEA+ +MR +GL P + ++ V L G++D A+ ++
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
PN V + T+I GLC A + E+L MI G + ++ LL C+EG
Sbjct: 408 ISEGLTPNGVVFRTLIHGLC-ACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGM 466
Query: 453 VENVMQIAHEMV 464
V I MV
Sbjct: 467 VTRAKNIFDLMV 478
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 171/373 (45%), Gaps = 40/373 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G K AI F + + + +YN+L+ L + A + F +VK+
Sbjct: 247 LLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKG 306
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
PD S Y T++ GY G + ++ DVM +P+ +N +I + K G ++EA
Sbjct: 307 H-KPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEA 365
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++M +G PN +TY ++ LC G+VD+A ++ G N ++++ G
Sbjct: 366 MLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHG 425
Query: 306 LCVVGKFDQA-------------------------------VGYLRNVME----ANMNPD 330
LC K+D+A V +N+ + ++ D
Sbjct: 426 LCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCD 485
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V +Y +I+G+C GK DEA LL+ M G+KP ++N + +NG ++ A L +
Sbjct: 486 VITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFR 545
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
QM P V Y+TI+ GL + R+ ++L MI+ G L Y+ +L+G C+
Sbjct: 546 QMASKGVNPGIVIYSTILHGLFQTR-RIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQN 604
Query: 451 GNVENVMQIAHEM 463
++ +++ H +
Sbjct: 605 NCTDDALRMFHNL 617
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 169/350 (48%), Gaps = 8/350 (2%)
Query: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL 164
H L+ + +++N + + + LI AY G V A+ F + +Q + +Y ++
Sbjct: 331 HQLLDV---MVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTV 387
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK- 223
+ L RV + A F +++ E + P V + T+I G C + A+++ M +
Sbjct: 388 MDALCRVGKVDDAMSQFDRLISEGLTPNGV-VFRTLIHGLCACDKWDKAEELAVEMIGRG 446
Query: 224 --PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
PN + +NT++N CK+G + AK + M+ + + +TY +I G C++G+VDEA
Sbjct: 447 ICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEAT 506
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L+ M L+G K N T+ +++ G C G+ + A R + +NP + Y +++G
Sbjct: 507 KLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGL 566
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
+ + A L M G+K + ++N + + L +N D A+ + + +D
Sbjct: 567 FQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQN 626
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
++N +I L + GR + +DL ++ G + Y ++K E+G
Sbjct: 627 RTFNIMIDAL-LKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 675
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 143/282 (50%), Gaps = 8/282 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK-------PNLLAYNTMINGFCKKGELEE 244
P+ +Y +++G C + A + M P++++Y T+ING ++G+L++
Sbjct: 165 PNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDK 224
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A +EM+++G PN +TYN +++G C +G+ EA + KM +G + +V T+ +++
Sbjct: 225 AYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMV 284
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
LC G+ +A ++++ PD Y +++G+ G + LL M G +P
Sbjct: 285 YLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQP 344
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ FN + ++G +D A+L +M Q PN V+Y T++ LC G++ D
Sbjct: 345 DHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRV-GKVDDAMSQ 403
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
DR+I G + ++ L+ G C + ++A EM+ +
Sbjct: 404 FDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGR 445
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 158/335 (47%), Gaps = 17/335 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++ NS L + R S +A F+++ + D+ TY+ +I + G ++ A
Sbjct: 66 IFDLNSALSAVAR-ESPAVALSLFNRMPR-----ADLCTYSIVIGCCSRAGHLDLAFAAL 119
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKK-CMNEMMNRGCRPNELTYNAMIYGLCI 273
+ + ++ ++ G C +A + M GC PN +YN ++ GLC
Sbjct: 120 GRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCD 179
Query: 274 NGRVDEA----KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
R +A +MA G +V ++ +++ GL G+ D+A +++ M+P
Sbjct: 180 ENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSP 239
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+ +Y +++G+C GK EAI + ++M G++P V ++N + L +NG A +
Sbjct: 240 NCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVF 299
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
M + P+ Y T++ G +G + + L+D M+R+G D +++ L+ Y +
Sbjct: 300 DSMVKKGHKPDSSIYGTLLHGYA-TEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAK 358
Query: 450 EGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
G V+ M +A + ++G + + T V+DAL
Sbjct: 359 HGMVDEAM-LAFSKMRQQGLHPNIVTYGT-VMDAL 391
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 132/300 (44%), Gaps = 18/300 (6%)
Query: 95 YTAITDVLLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQ-- 148
YT + D + A LL+ + K ++ + +I Y G ++ A F Q
Sbjct: 489 YTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMA 548
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
+K + G +YS ++L L + I A+E + ++K + P + TY +++G C+
Sbjct: 549 SKGVNPGIVIYS--TILHGLFQTRRIAAAKELYLWMIKCGIKLP-IGTYNIILQGLCQNN 605
Query: 209 MIENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
++A ++F + + L +N MI+ K G +EAK ++ RG PN +TY
Sbjct: 606 CTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYW 665
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
M+ L G ++E L + NG + +++ L G+ +A YL + E
Sbjct: 666 LMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDEN 725
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
N + + + E ++ GK D+ I+ + E +PT S AVF G D A
Sbjct: 726 NFSLEASTAESLVF-LVSSGKYDQHINSIPEK----YRPTAKS-RAVFSQKKNPGLFDAA 779
>gi|255660872|gb|ACU25605.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 484
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 215/432 (49%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSNTXEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELXVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVZEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I CK G
Sbjct: 248 GXGIKPNAITYSTLLPGLCNAEKMSEARVJLKEMMDKYLAPTDNSIFMRLIXSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHXGXLIENFCKVGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++ + G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q+ K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKXAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 225/485 (46%), Gaps = 58/485 (11%)
Query: 3 TPRRSLTNISQIPD-------QSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGS 55
TPR L N +I D T + + I+ L PQ
Sbjct: 78 TPRGKLRNPEKIEDIICRMMANRAWTTRLQNSIRSLVPQ------------------FDH 119
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
++V V++ N HAL FF W + H + I ++L S ++ A +L
Sbjct: 120 SLVWNVLHGSRNSDHALQFFRWVERAGL----FRHDRDTHLKIIEILGRASKLNHARCIL 175
Query: 116 KNSNKLS-----DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVR 170
+ K D F+ LI +YG G V+ ++ F + K++ + SY++L V++R
Sbjct: 176 LDMPKKGVEWDEDLFVL-LIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILR 234
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLL 227
+A+ +F+ ++ E V+P TY MI G+ +E A + F+ M + P+++
Sbjct: 235 RGRYMMAKRYFNAMLNEGVMPT-CHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVV 293
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YNTMING+ + ++EEA+K EM R P ++Y MI G GRVD+ L +M
Sbjct: 294 TYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEM 353
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGK 346
+ G K N T+ ++L GLC K +A ++ ++E + P D + +I CK G+
Sbjct: 354 KSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQ 413
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQM--------PQ 394
D A +LK M ++ ++ + + +L+EN G DRA+ LL ++ PQ
Sbjct: 414 LDAAADVLKAM----IRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQ 469
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
YN II LC + G+ E L ++++ G D ++ L++G+ +EG E
Sbjct: 470 NSLEMESSGYNLIIEYLCNS-GQTSKAETLFRQLMKKGVQ-DPIAFNNLIRGHSKEGAPE 527
Query: 455 NVMQI 459
+ +I
Sbjct: 528 SAFEI 532
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 44/278 (15%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D + +I Y K G+++ + KVF M V+ + +Y+ + ++G AK+
Sbjct: 186 DEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYF 245
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
N M+N G P TYN MI+G ++ +V+ A +M+
Sbjct: 246 NAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMK--------------------- 284
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
E ++PDV +Y +ING+ +I K +EA EM+ R ++PTV S+
Sbjct: 285 --------------ERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISY 330
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD---VEDLVD 426
+ + V G +D + L ++M PN V+Y+T++ GLC + ++ V+++V+
Sbjct: 331 TTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVE 390
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
R I N +++ L+ C+ G ++ + M+
Sbjct: 391 RYIAPKDN---SIFMRLITCQCKAGQLDAAADVLKAMI 425
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 10/273 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ L AE F Q++K+ V P + +IRG+ K G E+A ++ +M
Sbjct: 479 YNLIIEYLCNSGQTSKAETLFRQLMKKGVQDP--IAFNNLIRGHSKEGAPESAFEILKIM 536
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V AY +I F KKGE +AK ++ M+ G P+ + +++ L +GR+
Sbjct: 537 GRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRI 596
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A +M M G K+N+ +L+ L + G ++A+G + +M PD ++ +
Sbjct: 597 QTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPD---FDGL 653
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++ C GK+ A+ LL R + S+ V L+ G+ A +L ++ Q
Sbjct: 654 LSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAYSILCKIMQKGG 713
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
++ S +I L Q D++ RMI+
Sbjct: 714 ATDWSSCKDLIRSLNEEGNTKQ--ADILSRMIK 744
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 159/388 (40%), Gaps = 51/388 (13%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +IK Y G V + F + K +Y++LL L + A+ ++V+
Sbjct: 331 TTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVE 390
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ P D S + +I CK G ++ A V M ++ Y +I FCK G +
Sbjct: 391 RYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYD 450
Query: 244 EAKKCMNEMMNRGC--RP-NELT-----YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
A K +++++ + RP N L YN +I LC +G+ +A+ L ++ G +D
Sbjct: 451 RAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDP 510
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
++ + ++++G G + A L+ + + + +Y ++I F K G+ +A + L
Sbjct: 511 IAFN-NLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALD 569
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ------MD------------- 396
M G P F +V L E+G + A ++ M + MD
Sbjct: 570 GMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRG 629
Query: 397 ----------------CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
C P+F +++C AKG+ L+D + +N+ F+ Y
Sbjct: 630 HVEEALGRIDLLMNNGCEPDFDGLLSVLC----AKGKTIAALKLLDFGLERDYNISFSSY 685
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+L G N I +++ K G
Sbjct: 686 ENVLDALLTAGKTLNAYSILCKIMQKGG 713
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 205/416 (49%), Gaps = 27/416 (6%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----KNSN---KLSD 123
AL FFNWA Y HT Y ++ ++L + ++ A + L K S KL
Sbjct: 95 ALQFFNWAQEMG-----YTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEA 149
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + L++ + G + +I F K + ++NSLL +L++ +A++ + +
Sbjct: 150 RFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDE 209
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
++ V PD T+ +IRG+C GM+++ ++F+ ++ +P+++ YNT+++G C+ G
Sbjct: 210 MLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAG 269
Query: 241 ELEEAKKCMNEMMNRGC--RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
++ A + M + PN +TY +I G C +++A + +M G K N T
Sbjct: 270 KVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNIT 329
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVM-EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
+ +++KGLC KF++ L + +PD ++ +++ C G D+A+ + + M
Sbjct: 330 YNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERM 389
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD-------CLPNFVSYNTIICG 410
++P +++A+ R L + G ++A LL ++ + C P +YN I
Sbjct: 390 SELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKY 449
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC G+ + E +++R G D Y L+ G+C+EG E+ ++ M+ K
Sbjct: 450 LC-ETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRK 503
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 179/350 (51%), Gaps = 10/350 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +++ G + A+ +F+ A+++ SY S+L +L R + A F I K
Sbjct: 80 TTVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEK 139
Query: 187 EN--VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
+ +V + + +++R + + G+ + + KVF +M V P+++ +N+++ K+G
Sbjct: 140 RSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGR 199
Query: 242 LEEAKKCMNEMMNR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
AKK +EM++ G P+ T+N +I G C+NG VD+ + + G + +V T+
Sbjct: 200 TNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYN 259
Query: 301 SMLKGLCVVGKFDQAVGYLRNV--MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+++ GLC GK A ++ + ++NP+V +Y +I G+C + ++A+++ +EM
Sbjct: 260 TLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMV 319
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL-PNFVSYNTIICGLCMAKGR 417
+GLK ++N + + L E + ++ +L+ P+ ++NT++ C A G
Sbjct: 320 NQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHA-GN 378
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ D + +RM D YS L++ C+ G+ E + +++ +K
Sbjct: 379 LDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERK 428
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 111/243 (45%), Gaps = 12/243 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + GN+ A+ F + +++ +Y++L+ L + + AE+ ++++
Sbjct: 369 LMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERK 428
Query: 189 VV------PPDVSTYTTMIRGYCKMGMIENAKKVFDVM----TVKPNLLAYNTMINGFCK 238
++ P V+ Y + + C+ G + A+K F + T P +Y T+I G CK
Sbjct: 429 ILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPP--SYKTLIMGHCK 486
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+G E + + M+ + P+ TY ++I GL + A + KM + + N ST
Sbjct: 487 EGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSST 546
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
S+L L G+ ++ ++ +++ N+ ++ + G +D+A L+ +
Sbjct: 547 FHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLY 606
Query: 359 ARG 361
+G
Sbjct: 607 GKG 609
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 163/309 (52%), Gaps = 5/309 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN+++ +I+ A ++ + PD TY ++I G CK G +E A +FD
Sbjct: 210 SYNTIIHGYSSRGNIEGARRIL-DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDK 268
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + PN + YNT+I+G+C KG+LE A +EM+ +G P+ TYN +++ L + GR
Sbjct: 269 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 328
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA ++ +MR G + T+ ++ G G +A ++ + P +Y
Sbjct: 329 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTS 388
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I + + EA L +++ +G+ P V FNA+ NG ++RA +LLK+M +
Sbjct: 389 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKS 448
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V++NT++ G C +G++++ L+D M G D Y+ L+ GY G++++
Sbjct: 449 VPPDEVTFNTLMQGRC-REGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDA 507
Query: 457 MQIAHEMVT 465
+ EM++
Sbjct: 508 FXVRDEMLS 516
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 169/346 (48%), Gaps = 15/346 (4%)
Query: 129 LIKAYGDRGNVKAA--IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+I Y RGN++ A I + K IE + Y+Y SL+ + + ++ A F ++V+
Sbjct: 214 IIHGYSSRGNIEGARRILDAMRVKGIEPDS--YTYGSLISGMCKEGRLEEASGLFDKMVE 271
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+VP V TY T+I GYC G +E A D M K P++ YN +++ +G +
Sbjct: 272 IGLVPNAV-TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 330
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + EM +G P+ +TYN +I G G A L +M G + T+ S++
Sbjct: 331 EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLI 390
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
L + +A +++ ++PDV + +I+G C G + A LLKEM + +
Sbjct: 391 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVP 450
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +FN + + G+++ A +LL +M P+ +SYNT+I G GR D++D
Sbjct: 451 PDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGY----GRRGDIKD 506
Query: 424 ---LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ D M+ G N Y+ L+K C+ + ++ EMV K
Sbjct: 507 AFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 552
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 200/409 (48%), Gaps = 27/409 (6%)
Query: 75 FNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN-SNKLSDFFISKLIKAY 133
F+++ N N N +TP IT+ ++S S++S ++ S L+ IS ++
Sbjct: 49 FHFSFNRNFNSLASSESTP---PITZEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNL 105
Query: 134 GDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV--LVRVNSIKLAEEFFHQIVKENVVP 191
+ + + F H CL + + L V L R+ S KLA + Q+++ +
Sbjct: 106 CSKPQL-VSDFIHHLHPH-----CLDTKSYCLAVVLLARLPSPKLALQLLKQVMETRIAT 159
Query: 192 -PDVSTYTTMIRGYCKM----------GMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
++ T+ R + G ++ A++ M KPN+++YNT+I+G+
Sbjct: 160 NRELFDELTLSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 219
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+G +E A++ ++ M +G P+ TY ++I G+C GR++EA L KM G N
Sbjct: 220 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 279
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ G C G ++A Y +++ + P V +Y ++++ G+ EA ++KEM
Sbjct: 280 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 339
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
R +G+ P ++N + G RA L +M P V+Y ++I L + R
Sbjct: 340 RKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLS-RRNR 398
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M++ +DL ++++ G + D M++ ++ G+C GNVE + EM K
Sbjct: 399 MKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRK 447
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 171/350 (48%), Gaps = 40/350 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+ + ++ R + LA +I+K PD T++T+I G C G + A ++
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGY-EPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 218 DVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY---------- 264
D M KP L+ N ++NG C G++ +A ++ M+ G +PNE+TY
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 265 -------------------------NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+ +I GLC +G +D A L +M + GFK ++ +
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++++G C G++D LR++++ + PDV ++ +I+ F K GK EA L KEM
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RG+ P ++ ++ + +LD+A +L M C PN ++N +I G C A +
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN-LID 404
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
D +L +M G D Y+ L++G+CE G +E ++ EMV+++ R
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 167/329 (50%), Gaps = 7/329 (2%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ F + + L ++ L V+ R L + Q+ + + ++ T + MI
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-NLYTLSIMI 114
Query: 202 RGYC---KMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
C K+ + +A + +P+ + ++T+ING C +G + EA + ++ M+ G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P +T NA++ GLC+NG+V +A +L+ +M GF+ N T+ +LK +C G+ A+
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
LR + E + D Y ++I+G CK G D A +L EM +G K + + + R
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-GRMQDVEDLVDRMIRSGHNLDF 437
G D LL+ M + P+ V+++ +I C K G++++ E+L MI+ G + D
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALI--DCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+ G+C+E ++ + MV+K
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 183/376 (48%), Gaps = 9/376 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y + V+ ++A LL+ KL S +I G++ A F++ +
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
A + Y +L+ + ++K + P DV ++ +I + K G +
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP-DVVAFSALIDCFVKEGKL 333
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A+++ M + P+ + Y ++I+GFCK+ +L++A ++ M+++GC PN T+N +
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C +D+ L KM L G + T+ ++++G C +GK + A + ++ +
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD+ SY+++++G C G+ ++A+ + +++ ++ + +N + + ++D A
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L +P P+ +YN +I GLC KG + + + L +M GH+ + Y+ L++ +
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLC-KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 448 CEEGNVENVMQIAHEM 463
EG+ ++ E+
Sbjct: 573 LGEGDATKSAKLIEEI 588
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 121/236 (51%), Gaps = 5/236 (2%)
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
G + ++N L+ + N I E F ++ VV D TY T+I+G+C++G +E AK
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGKLEVAK 442
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++F M V+P++++Y +++G C GE E+A + ++ + YN +I+G+
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +VD+A L + L G K +V T+ M+ GLC G +A R + E +P+
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+Y ++I G + ++ L++E++ G + V +L +G L ++ L
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSFL 617
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 129/260 (49%), Gaps = 4/260 (1%)
Query: 211 ENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
++A +F MT +P L+ ++ + + + + + +M +G N T + M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I C ++ A M K+ G++ + T +++ GLC+ G+ +A+ + ++E
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P + + ++NG C GK +A+ L+ M G +P ++ V +++ ++G+ A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LL++M + + V Y+ II GLC G + + +L + M G D +Y+ L++G+
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLC-KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 448 CEEGNVENVMQIAHEMVTKK 467
C G ++ ++ +M+ +K
Sbjct: 293 CYAGRWDDGAKLLRDMIKRK 312
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 110/239 (46%), Gaps = 15/239 (6%)
Query: 115 LKNSNKLSDFFISK-----------LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNS 163
L +N + D +SK LI Y + + F + A +YN+
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-- 221
L+ + +++A+E F ++V V PD+ +Y ++ G C G E A ++F+ +
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRV-RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 222 -VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
++ ++ YN +I+G C ++++A + +G +P+ TYN MI GLC G + EA
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
+L KM +G N T+ +++ G ++ + + + D + ++V++
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+ ++IN C+ K A S + ++ G +P +F+ + L G + A+ L+ +M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+M P ++ N ++ GLC+ G++ D L+DRM+ +G + Y +LK C+ G
Sbjct: 169 VEMGHKPTLITLNALVNGLCL-NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 453 VENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
M++ +M +K +L +K + ++D L
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSI--IIDGL 257
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 83/172 (48%), Gaps = 2/172 (1%)
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
K VS + + G+ + K D AV + + + P + + + + + + D +
Sbjct: 35 KGKVSYRERLRSGIVDI-KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLD 93
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
L K+M +G+ +++ + + +L A + ++ ++ P+ V+++T+I GLC
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ +GR+ + +LVDRM+ GH + L+ G C G V + + + MV
Sbjct: 154 L-EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 166/306 (54%), Gaps = 4/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+ L+ V+ + A F + + +N PDV T+ T+I G CK G++ +A + + M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PNL+ Y T+++GFCKK +LEEA +NEM +G N + YN ++ LC NG+V
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A ++ +M G K ++ T +++ GLC V + + A+ R+++ + + +Y +
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ F + G EA+ L+ +M RG ++N + + + G ++A+ L +M + D
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDL 586
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ +S N +I GLC G++ + +L+ MI G D Y+ L+ G C+ GN+
Sbjct: 587 VPSNISCNLLINGLCRV-GKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAF 645
Query: 458 QIAHEM 463
+ +++
Sbjct: 646 NLFNKL 651
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 185/362 (51%), Gaps = 10/362 (2%)
Query: 111 AASLLKNSNKL----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLG 166
A SLL++ K + LI A R V A+ + + + ++N ++
Sbjct: 227 ACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIY 286
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNL 226
L R+N I + +++ P D+ TY ++ G C++G ++ A+ + + + PN
Sbjct: 287 GLCRLNRIHEGAKLVDRMLFRGFTPNDI-TYGVLMNGLCRVGKVDEAQVLLNKVPT-PND 344
Query: 227 LAYNTMINGFCKKGELEEAKKCM-NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+ + +ING+ K G L+EA + ++M+ GCRP+ T+N +I+GLC G + A ++
Sbjct: 345 VHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVN 404
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPDVKSYEVVINGFCKI 344
M NG N+ T+ ++L G C + ++A GY+ N M A ++ Y V++ CK
Sbjct: 405 DMSANGCTPNLITYTTLLDGFCKKNQLEEA-GYVLNEMSAKGFELNIMGYNVLLRALCKN 463
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
GK +A+ +L EM +G KP +F+FN + L + + A+ L + M + N V+Y
Sbjct: 464 GKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTY 523
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
NT+I + G +Q+ LV+ M+ G LD Y+ L+K +C+ G E + + EMV
Sbjct: 524 NTLIHAF-LRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMV 582
Query: 465 TK 466
K
Sbjct: 583 RK 584
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 182/385 (47%), Gaps = 43/385 (11%)
Query: 111 AASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGA--CLYSYNSLLGVL 168
A LL +D + LI Y G + A + + K I+NG ++++N+L+ L
Sbjct: 332 AQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYD-KMIKNGCRPDVFTFNTLIHGL 390
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---N 225
+ + A + + + N P++ TYTT++ G+CK +E A V + M+ K N
Sbjct: 391 CKKGLMGSAVDMVNDM-SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELN 449
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++ YN ++ CK G++ +A + EM ++GC+P+ T+N +I+GLC R ++A L
Sbjct: 450 IMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYR 509
Query: 286 KMRLNGFKDNVSTHKSML-----------------------------------KGLCVVG 310
M L+G N T+ +++ K C +G
Sbjct: 510 DMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLG 569
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
++A+G ++ ++ P S ++ING C++GK A+ LL++M RGL P V ++N
Sbjct: 570 ATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYN 629
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
++ L + G + A L ++ P+ ++YNT+IC C A G D L+ R +
Sbjct: 630 SLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRA-GMFDDAYLLLLRGVE 688
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVEN 455
+ + + L+ + +E EN
Sbjct: 689 NAFIPNDVTWYILVSNFIKEIGKEN 713
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 171/398 (42%), Gaps = 48/398 (12%)
Query: 75 FNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKL---IK 131
F WA + Y HT Y + D L + + LL + F L I
Sbjct: 89 FQWAGSQK----GYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIM 144
Query: 132 AYGDRGNV--KAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
Y R N+ +A SYN +L +LV N +A F++++ + V
Sbjct: 145 KYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGV 204
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
+P V T+ +++ C M+N E++ A +
Sbjct: 205 IPT-VYTFGVVMKALC--------------------------MVN------EVDNACSLL 231
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M GC PN + Y +I+ L RV+EA L+ +M L G +V T ++ GLC +
Sbjct: 232 RDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRL 291
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ + + ++ P+ +Y V++NG C++GK DEA LL ++ P F
Sbjct: 292 NRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHF 347
Query: 370 NAVFRILVENGELDRA-ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ V++G LD A L +M + C P+ ++NT+I GLC KG M D+V+ M
Sbjct: 348 TILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLC-KKGLMGSAVDMVNDM 406
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+G + Y+ LL G+C++ +E + +EM K
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAK 444
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 5/212 (2%)
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C P +YN ++ L A + +M G V T ++K LC+V + D A
Sbjct: 169 CEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNAC 228
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
LR++ + P+ Y+ +I+ K + +EA+ LL+EM G P V +FN V L
Sbjct: 229 SLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGL 288
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ L+ +M PN ++Y ++ GLC G++ + + L+++ + + +++
Sbjct: 289 CRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRV-GKVDEAQVLLNK-VPTPNDVH 346
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
FT+ L+ GY + G ++ ++ + K G
Sbjct: 347 FTI---LINGYVKSGRLDEANAFLYDKMIKNG 375
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 147/266 (55%), Gaps = 10/266 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++++L+ V+ + AE+ + ++VK ++ P + TY+++I G+C ++ AK++F
Sbjct: 940 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMF 998
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K P+++ YNT+I GFCK +EE + EM RG N +TYN +I GL
Sbjct: 999 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 1058
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A+ + +M +G N+ T+ ++L GLC GK ++A+ + + M P + +Y
Sbjct: 1059 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 1118
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I G CK GK ++ L + +G+KP V ++N + G + A L K+M +
Sbjct: 1119 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 1178
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQD 420
LPN YNT+I + R++D
Sbjct: 1179 DGTLPNSGCYNTLI------RARLRD 1198
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+SI +LK + I L+ + R V A+ + +I + +YN+++
Sbjct: 243 LSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 302
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---P 224
L + + A +FF +I ++ + P+V TYT ++ G C +A ++ M K P
Sbjct: 303 LCKTKRVNDAFDFFKEIERKG-IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 361
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N++ Y+ +++ F K G++ EAK+ EM+ P+ +TY+++I GLC++ R+DEA +
Sbjct: 362 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 421
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G +V ++ +++ G C + + + R + + + + +Y +I GF +
Sbjct: 422 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 481
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G D+A +M G+ P ++++N + L +NGEL++A+++ + M + + + V+Y
Sbjct: 482 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 541
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
T+I G+C G++++ L + G D Y+ ++ G C +G + V + +M
Sbjct: 542 TTVIRGMCKT-GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 599
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 169/340 (49%), Gaps = 5/340 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
SKL+ A I Q + + Y+Y+ L+ R + + LA +++K
Sbjct: 699 SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 758
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELE 243
P++ T ++++ GYC I A + D M V +PN + +NT+I+G +
Sbjct: 759 LGY-EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 817
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA ++ M+ +GC+P+ +TY ++ GLC G D A L+ KM + V + +++
Sbjct: 818 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 877
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GLC D A+ + + + P+V +Y +I+ C G+ +A LL +M R +
Sbjct: 878 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 937
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P VF+F+A+ V+ G+L A L +M + P+ V+Y+++I G CM R+ + +
Sbjct: 938 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM-HDRLDEAKQ 996
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ + M+ D Y+ L+KG+C+ VE M++ EM
Sbjct: 997 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 1036
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 148/277 (53%), Gaps = 13/277 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++LL V+ + A+E F ++V+ ++ PD+ TY+++I G C I+ A ++FD+
Sbjct: 365 TYSALLDAFVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLINGLCLHDRIDEANQMFDL 423
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K ++++YNT+INGFCK +E+ K EM RG N +TYN +I G G
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 483
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A+ ++M G ++ T+ +L GLC G+ ++A+ ++ + M+ D+ +Y
Sbjct: 484 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 543
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI G CK GK +EA SL + +GLKP + ++ + L G L L +M Q
Sbjct: 544 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+ N + ++ G + +L+ +M+ G+
Sbjct: 604 LMKNDCT---------LSDGDITLSAELIKKMLSCGY 631
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 162/307 (52%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L A ++ E + PDV T++ +I + K G + A+K++D
Sbjct: 907 TYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 965
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ P+++ Y+++INGFC L+EAK+ M+++ C P+ +TYN +I G C R
Sbjct: 966 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 1025
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+E + +M G N T+ +++GL G D A + ++ + P++ +Y
Sbjct: 1026 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 1085
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G CK GK ++A+ + + ++ ++PT++++N + + + G+++ L +
Sbjct: 1086 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 1145
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+YNT+I G C KG ++ + L M G + Y+ L++ +G+ E
Sbjct: 1146 VKPDVVAYNTMISGFC-RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 1204
Query: 457 MQIAHEM 463
++ EM
Sbjct: 1205 AELIKEM 1211
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 144/277 (51%), Gaps = 4/277 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
P+ T+ T+I G A + D M K P+L+ Y ++NG CK+G+ + A
Sbjct: 798 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 857
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+N+M P L YN +I GLC +D+A L +M G + NV T+ S++ LC
Sbjct: 858 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 917
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G++ A L +++E +NPDV ++ +I+ F K GK EA L EM R + P++ +
Sbjct: 918 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 977
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++++ + LD A + + M C P+ V+YNT+I G C K R+++ ++ M
Sbjct: 978 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREM 1036
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ G + Y+ L++G + G+ + +I EMV+
Sbjct: 1037 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 1073
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 179/361 (49%), Gaps = 8/361 (2%)
Query: 111 AASLLKN-SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV 169
A SLL+ S K S + KL + + A+ F + + + ++ LL +
Sbjct: 647 ALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIA 706
Query: 170 RVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPN 225
++N + Q+ +N+ +P + TY+ +I +C+ + A V M +PN
Sbjct: 707 KMNKFDVVISLGEQM--QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPN 764
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++ ++++NG+C + EA +++M G +PN +T+N +I+GL ++ + EA L+
Sbjct: 765 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALID 824
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M G + ++ T+ ++ GLC G D A L + + + P V Y +I+G CK
Sbjct: 825 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 884
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
D+A++L KEM +G++P V +++++ L G A LL M + P+ +++
Sbjct: 885 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 944
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+I + +G++ + E L D M++ + YS L+ G+C ++ Q+ MV+
Sbjct: 945 ALIDAF-VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 1003
Query: 466 K 466
K
Sbjct: 1004 K 1004
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 158/301 (52%), Gaps = 5/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y ++ L + LA +++ ++ + P V Y T+I G CK +++A +F
Sbjct: 835 LVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 893
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++PN++ Y+++I+ C G +A + +++M+ R P+ T++A+I
Sbjct: 894 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 953
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++ EA+ L +M ++ T+ S++ G C+ + D+A ++ + PDV +Y
Sbjct: 954 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 1013
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I GFCK + +E + + +EM RGL ++N + + L + G+ D A + K+M
Sbjct: 1014 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 1073
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN ++YNT++ GLC G+++ + + + RS Y+ +++G C+ G VE
Sbjct: 1074 DGVPPNIMTYNTLLDGLC-KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 1132
Query: 455 N 455
+
Sbjct: 1133 D 1133
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 155/299 (51%), Gaps = 5/299 (1%)
Query: 169 VRVNSIKL--AEEFFHQIVKENVVPP--DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP 224
R+ IKL A + F +VK P D + + I K ++ + K +V+ ++
Sbjct: 162 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 221
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+L +N +IN FC ++ A + +M+ G P+ +T +++ G C RV +A L+
Sbjct: 222 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 281
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
KM G+K ++ + +++ LC + + A + + + + P+V +Y ++NG C
Sbjct: 282 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 341
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
+ +A LL +M + + P V +++A+ V+NG++ A L ++M +M P+ V+Y
Sbjct: 342 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 401
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+++I GLC+ R+ + + D M+ G D Y+ L+ G+C+ VE+ M++ EM
Sbjct: 402 SSLINGLCL-HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 459
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 144/274 (52%), Gaps = 4/274 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCM 249
D+ T+ +I +C + A + M +P+ + +++NGFC++ + +A +
Sbjct: 222 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 281
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++M+ G +P+ + YNA+I LC RV++A ++ G + NV T+ +++ GLC
Sbjct: 282 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 341
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
++ A L ++++ + P+V +Y +++ F K GK EA L +EM + P + ++
Sbjct: 342 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 401
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+++ L + +D A + M CL + VSYNT+I G C AK R++D L M
Sbjct: 402 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK-RVEDGMKLFREMS 460
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G + Y+ L++G+ + G+V+ + +M
Sbjct: 461 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 148/335 (44%), Gaps = 44/335 (13%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSD--FFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+++ L ++ S A+ LL + K++ F S LI A+ G + A + +
Sbjct: 908 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +Y+SL+ + + A++ F +V ++ P DV TY T+I+G+CK +
Sbjct: 968 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP-DVVTYNTLIKGFCKYKRV 1026
Query: 211 ENAKKVFDVMT--------------------------------------VKPNLLAYNTM 232
E +VF M+ V PN++ YNT+
Sbjct: 1027 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 1086
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
++G CK G+LE+A + P TYN MI G+C G+V++ L + L G
Sbjct: 1087 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 1146
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
K +V + +M+ G C G ++A + + E P+ Y +I + G + +
Sbjct: 1147 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 1206
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
L+KEMR+ G + V +L +G LD++ L
Sbjct: 1207 LIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSFL 1240
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L + + K+D + + + + D+ ++ +VIN FC + A+S+L +M G
Sbjct: 194 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 253
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+P + ++ + A+ L+ +M ++ P+ V+YN II LC K R+ D
Sbjct: 254 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK-RVNDA 312
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D + R G + Y+ L+ G C + ++ +M+ KK
Sbjct: 313 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 358
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 225/485 (46%), Gaps = 58/485 (11%)
Query: 3 TPRRSLTNISQIPD-------QSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGS 55
TPR L N +I D T + + I+ L PQ
Sbjct: 78 TPRGKLRNPEKIEDIICRMMANRAWTTRLQNSIRSLVPQ------------------FDH 119
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
++V V++ N HAL FF W + H + I ++L S ++ A +L
Sbjct: 120 SLVWNVLHGSRNSDHALQFFRWVERAGL----FRHDRDTHLKIIEILGRASKLNHARCIL 175
Query: 116 KNSNKLS-----DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVR 170
+ K D F+ LI +YG G V+ ++ F + K++ + SY++L V++R
Sbjct: 176 LDMPKKGVEWDEDLFVL-LIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILR 234
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLL 227
+A+ +F+ ++ E V+P TY MI G+ +E A + F+ M + P+++
Sbjct: 235 RGRYMMAKRYFNAMLNEGVMPT-CHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVV 293
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YNTMING+ + ++EEA+K EM R P ++Y MI G GRVD+ L +M
Sbjct: 294 TYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEM 353
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGK 346
+ G K N T+ ++L GLC K +A ++ ++E + P D + +I CK G+
Sbjct: 354 KSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQ 413
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQM--------PQ 394
D A +LK M ++ ++ + + +L+EN G DRA+ LL ++ PQ
Sbjct: 414 LDAAADVLKAM----IRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQ 469
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
YN II LC + G+ E L ++++ G D ++ L++G+ +EG E
Sbjct: 470 NSLEMESSGYNLIIEYLCNS-GQTSKAETLFRQLMKKGVQ-DPIAFNNLIRGHSKEGAPE 527
Query: 455 NVMQI 459
+ +I
Sbjct: 528 SAFEI 532
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 44/278 (15%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D + +I Y K G+++ + KVF M V+ + +Y+ + ++G AK+
Sbjct: 186 DEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYF 245
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
N M+N G P TYN MI+G ++ +V+ A +M+
Sbjct: 246 NAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMK--------------------- 284
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
E ++PDV +Y +ING+ +I K +EA EM+ R ++PTV S+
Sbjct: 285 --------------ERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISY 330
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD---VEDLVD 426
+ + V G +D + L ++M PN V+Y+T++ GLC + ++ V+++V+
Sbjct: 331 TTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVE 390
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
R I N +++ L+ C+ G ++ + M+
Sbjct: 391 RYIAPKDN---SIFMRLITCQCKAGQLDAAADVLKAMI 425
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 10/273 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ L AE F Q++K+ V P + +IRG+ K G E+A ++ +M
Sbjct: 479 YNLIIEYLCNSGQTSKAETLFRQLMKKGVQDP--IAFNNLIRGHSKEGAPESAFEILKIM 536
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V AY +I F KKGE +AK ++ M+ G P+ + +++ L +GR+
Sbjct: 537 GRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRI 596
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A +M M G K+N+ +L+ L + G ++A+G + +M PD ++ +
Sbjct: 597 QTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPD---FDGL 653
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++ C GK+ A+ LL R + S+ V L+ G+ A +L ++ Q
Sbjct: 654 LSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAYSILCKIMQKGG 713
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
++ S +I L Q D++ RMI+
Sbjct: 714 ATDWSSCKDLIRSLNEEGNTKQ--ADILSRMIK 744
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 159/388 (40%), Gaps = 51/388 (13%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +IK Y G V + F + K +Y++LL L + A+ ++V+
Sbjct: 331 TTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVE 390
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ P D S + +I CK G ++ A V M ++ Y +I FCK G +
Sbjct: 391 RYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYD 450
Query: 244 EAKKCMNEMMNRGC--RP-NELT-----YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
A K +++++ + RP N L YN +I LC +G+ +A+ L ++ G +D
Sbjct: 451 RAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDP 510
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
++ + ++++G G + A L+ + + + +Y ++I F K G+ +A + L
Sbjct: 511 IAFN-NLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALD 569
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ------MD------------- 396
M G P F +V L E+G + A ++ M + MD
Sbjct: 570 GMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRG 629
Query: 397 ----------------CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
C P+F +++C AKG+ L+D + +N+ F+ Y
Sbjct: 630 HVEEALGRIDLLMNNGCEPDFDGLLSVLC----AKGKTIAALKLLDFGLERDYNISFSSY 685
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+L G N I +++ K G
Sbjct: 686 ENVLDALLTAGKTLNAYSILCKIMQKGG 713
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 170/322 (52%), Gaps = 11/322 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG---MIENAK 214
++++N ++ L + + A + + K P+V +Y T+I GYCK+G + A
Sbjct: 223 VFTFNVVINALCKTGKMNKARDVMEDM-KVYGYSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
V M V PNL +N +I+GF K L + K EM+++ PN +TYN++I GL
Sbjct: 282 AVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGL 341
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G+++EA + KM G + N+ T+ S++ G C G +A+ +V P
Sbjct: 342 CNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTT 401
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+ Y ++I+ +CK+GK D+ +L +EM G+ P V ++N + L NG ++ A L Q
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ LP+ V+++ ++ G C ++G + L+ M + G Y+ ++KGYC+EG
Sbjct: 462 LTN-KGLPDLVTFHILMEGYC-SRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEG 519
Query: 452 NVENVMQIAHEMVTKKGRLLKL 473
N++ + +M +K R L++
Sbjct: 520 NLKAATNMRTQM--EKERRLRM 539
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 159/311 (51%), Gaps = 10/311 (3%)
Query: 129 LIKAY---GDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI Y G G + A + + E L ++N L+ + +++ + + F +++
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEML 323
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
++V+P +V TY ++I G C G I A + D M V+PNL+ Y+++INGFCK G +
Sbjct: 324 DQDVIP-NVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMM 382
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+EA + + +G RP YN +I C G++D+ L +M G +V T+ +
Sbjct: 383 KEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC G + A + + PD+ ++ +++ G+C G+S +A LLKEM GL
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGL 501
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP-NFVSYNTIICGLCMAKGRMQDV 421
KP ++N + + + G L A + QM + L N SYN ++ G KG+++D
Sbjct: 502 KPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS-QKGKLEDA 560
Query: 422 EDLVDRMIRSG 432
L++ M+ G
Sbjct: 561 NMLLNEMLEKG 571
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 132/250 (52%), Gaps = 11/250 (4%)
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ KP ++A K+ + + EM+ R +PN T+N +I LC G+
Sbjct: 186 LSAMSCKPLMVA-------LLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGK 238
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV---GKFDQAVGYLRNVMEANMNPDVKS 333
+++A+ +M M++ G+ NV ++ +++ G C + GK +A L+ ++E ++P++ +
Sbjct: 239 MNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTT 298
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+ ++I+GF K ++ + KEM + + P V ++N++ L G+++ AI + +M
Sbjct: 299 FNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMV 358
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
PN ++Y+++I G C G M++ D+ D + G MY+ L+ YC+ G +
Sbjct: 359 SAGVQPNLITYHSLINGFC-KNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKI 417
Query: 454 ENVMQIAHEM 463
++ + EM
Sbjct: 418 DDGFALKEEM 427
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 4/212 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G +K A+ F K YN L+ ++ I ++ +E
Sbjct: 372 LINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFCKKGELEEAK 246
+V PDV TY +I G C+ G IE AKK+FD +T K P+L+ ++ ++ G+C +GE +A
Sbjct: 432 IV-PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAA 490
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKG 305
+ EM G +P LTYN M+ G C G + A + +M + + NV+++ +L+G
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
GK + A L ++E + P+ +YE+V
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K +S + L KEM R ++P VF+FN V L + G++++A +++ M PN V
Sbjct: 200 KQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVV 259
Query: 403 SYNTIICGLCM--AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
SYNT+I G C G+M + ++ M+ + + + T ++ L+ G+ ++ N+ +++
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVF 319
Query: 461 HEMVTK 466
EM+ +
Sbjct: 320 KEMLDQ 325
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 162/302 (53%), Gaps = 3/302 (0%)
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELE 243
I++E+ D ++Y +I YCK G IE A +V D +V PN Y+ ++ C +G+L+
Sbjct: 129 ILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLK 188
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + ++ + C P+ +T +I C V +A L +MR G K +V T+ ++
Sbjct: 189 QAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLI 248
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
KG C G+ D+A+ +L+ + DV S+ +++ C G+ +A+ LL M +G
Sbjct: 249 KGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCF 308
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P+V +FN + L + G L +A+ +L+ MP+ PN S+N +I G C KG + +E
Sbjct: 309 PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEH 368
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDA 483
L + M+ G D Y+ LL C++G V++ + I ++ + KG L ++ T V+D
Sbjct: 369 L-EIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQL-SSKGCSPSLISYNT-VIDG 425
Query: 484 LL 485
LL
Sbjct: 426 LL 427
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 170/370 (45%), Gaps = 40/370 (10%)
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
DRG +K A+ + Q + + + L+ + + + A + F+++ + PDV
Sbjct: 183 DRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEM-RGKGCKPDV 241
Query: 195 STYTTMIRGYCKMGMIE-----------------------------------NAKKVFDV 219
TY +I+G+CK G ++ +A K+
Sbjct: 242 VTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLAT 301
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ +N +IN C+KG L +A + M G PN ++N +I G C
Sbjct: 302 MLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKG 361
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A + M G ++ T+ +L LC GK D AV L + +P + SY
Sbjct: 362 IDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 421
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G K+GK++ A+ LL+EM +GLKP + + +V L G++ AI +
Sbjct: 422 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFG 481
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN YN+I+ GLC A+ ++ LVD M+ +G Y+ L+KG EG E
Sbjct: 482 IKPNAFIYNSIMMGLCKAQQTSLAIDFLVD-MVANGCKPTEASYTTLIKGITYEGLAEEA 540
Query: 457 MQIAHEMVTK 466
++++E+ ++
Sbjct: 541 SKLSNELYSR 550
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 137/272 (50%), Gaps = 8/272 (2%)
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G +E + + MT K P+++A +I FCK G + A + M + G + +Y
Sbjct: 83 GELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSY 142
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I C +G ++EA ++ + N +T+ ++L LC GK QA+ L ++
Sbjct: 143 NVLINAYCKSGEIEEALRVLDHTSV---APNAATYDAVLCSLCDRGKLKQAMQVLDRQLQ 199
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ PDV + V+I+ CK +A+ L EMR +G KP V ++N + + + G LD
Sbjct: 200 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDE 259
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
AI+ LK++P C + +S+N I+ LC + GR D L+ M+R G ++ L+
Sbjct: 260 AIIFLKKLPSYGCQSDVISHNMILRSLC-SGGRWMDAMKLLATMLRKGCFPSVVTFNILI 318
Query: 445 KGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
C++G + + + EM+ K G ++F
Sbjct: 319 NFLCQKGLLGKALNVL-EMMPKHGHTPNSRSF 349
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 17/226 (7%)
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
NG ++E + M G +V ++++ C +G+ A + + E+ D S
Sbjct: 82 NGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANS 141
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y V+IN +CK G+ +EA+ +L + P +++AV L + G+L +A+ +L +
Sbjct: 142 YNVLINAYCKSGEIEEALRVLDHTS---VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQL 198
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
Q C P+ V+ +I C G Q ++ L + M G D Y+ L+KG+C+EG +
Sbjct: 199 QSKCYPDVVTCTVLIDATCKESGVGQAMK-LFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257
Query: 454 ENVMQIAHEMVTKKGRLLKLKNFLTR---VVDALLLMWIVTGGSWI 496
+ + L KL ++ + + ++L + +GG W+
Sbjct: 258 DEAIIF----------LKKLPSYGCQSDVISHNMILRSLCSGGRWM 293
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI+ + +R + AI H + G + +YN LL L + + A Q+
Sbjct: 352 LIQGFCNRKGIDRAIE--HLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS 409
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ P +S Y T+I G K+G E A ++ + M +KP+L+ +++ G ++G++
Sbjct: 410 KGCSPSLIS-YNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVH 468
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA K + + G +PN YN+++ GLC + A + M NG K +++ +++
Sbjct: 469 EAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLI 528
Query: 304 KGLCVVGKFDQA 315
KG+ G ++A
Sbjct: 529 KGITYEGLAEEA 540
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 5/126 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLKN----SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y + D LL +A LL+ K + ++ G V AI +FH K
Sbjct: 419 YNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLK 478
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ YNS++ L + LA +F +V P + S YTT+I+G G+
Sbjct: 479 GFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEAS-YTTLIKGITYEGLA 537
Query: 211 ENAKKV 216
E A K+
Sbjct: 538 EEASKL 543
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 200/429 (46%), Gaps = 35/429 (8%)
Query: 58 VTKVIYEQT-NPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAAS--L 114
+ +++Q +P L FF WAS + N D + SL+ + A +
Sbjct: 63 IAHFVFDQIHDPRLGLNFFEWASKQSTLSNSL-----------DGFVCSSLLKLLARFRV 111
Query: 115 LKNSNKLSDFFISK-----------LIKAYGDRGNVKAAIFWFHQAKQIENGAC-LYSYN 162
K L + SK +I AY G VK A+ ++ + N +++ N
Sbjct: 112 FKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACN 171
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI--RGYCKMGMIENAKKVFDVM 220
SLL +LV +++A + + ++V N DV YT I +G CK G +E + + +
Sbjct: 172 SLLNLLVHHGKVEIARKVYDEMVDRN---GDVDNYTVCIVTKGLCKEGKVEEGRHLIEKR 228
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K PN++ YNT+I+G+CK G++E A E+ +G P TY AMI C G+
Sbjct: 229 WGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKF 288
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+ L+ +M+ G ++ ++ G +A +R ++E+ PD+ +Y +
Sbjct: 289 EAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTL 348
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
ING C GK EA LL+ RGL P FS+ + +NGE RA LL +M +
Sbjct: 349 INGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGH 408
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ ++Y ++ GL +A G + + D+M+ G D +Y+ L+ G C++G
Sbjct: 409 TLDLIAYGALVHGLVVA-GEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAK 467
Query: 458 QIAHEMVTK 466
Q+ EM+ +
Sbjct: 468 QLLVEMLDQ 476
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 148/344 (43%), Gaps = 40/344 (11%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ + I+ A F ++ + +P V TY MI +CK G E K+ M
Sbjct: 240 YNTLIDGYCKNGDIERANLLFKELKVKGFLPT-VKTYGAMINAFCKKGKFEAVDKLLVEM 298
Query: 221 T--------------------------------------VKPNLLAYNTMINGFCKKGEL 242
+P++ YNT+ING C KG++
Sbjct: 299 KERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKV 358
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA++ + + RG PN+ +Y +I+ NG A L+ +M G ++ + ++
Sbjct: 359 REAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGAL 418
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GL V G+ D A+ +ME + PD Y V+++G CK G+ A LL EM + +
Sbjct: 419 VHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNV 478
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P F + + +G LD A L + + + V N +I G C G M D
Sbjct: 479 TPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYC-KYGMMNDAL 537
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
RM H+ D YS ++ GY ++ ++ +++ M+ K
Sbjct: 538 LCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKK 581
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 143/319 (44%), Gaps = 39/319 (12%)
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E+ PD++TY T+I G C G + A+++ + + PN +Y +I+ F K GE
Sbjct: 335 ESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYV 394
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + + EM RG + + Y A+++GL + G VD A + KM G + + + ++
Sbjct: 395 RASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLM 454
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GLC G+F A L +++ N+ PD +++GF + G DEA L + RG+
Sbjct: 455 SGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGID 514
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQM--------------------PQMD------- 396
+V NA+ + + G ++ A+L K+M Q D
Sbjct: 515 TSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRM 574
Query: 397 --------CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
C PN V++ ++I G C G + E + + M G + Y+ L+ +C
Sbjct: 575 FGLMLKKTCKPNVVTFTSLINGFC-RNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFC 633
Query: 449 EEGNVENVMQIAHEMVTKK 467
+EG + +M+ K
Sbjct: 634 KEGKLTKACFFFEQMLINK 652
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 163/356 (45%), Gaps = 14/356 (3%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI A+ G A + + + L +Y +L+ LV + +A +
Sbjct: 378 FSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDK 437
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKG 240
+++ ++P D + Y ++ G CK G AK++ M V P+ T+++GF + G
Sbjct: 438 MMERGILP-DANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHG 496
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
L+EAKK + RG + + NAMI G C G +++A + +M + T+
Sbjct: 497 NLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYS 556
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G A+ +++ P+V ++ +INGFC+ G + A + +EMR+
Sbjct: 557 TIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSF 616
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG---- 416
G +P V ++ + + G+L +A +QM C+PN ++N ++ GL G
Sbjct: 617 GFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAIS 676
Query: 417 --RMQDVEDLV----DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R +L MI G + Y+ +L C+ V+ +Q+ +M++K
Sbjct: 677 SKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSK 732
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 119/282 (42%), Gaps = 58/282 (20%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IK Y G + A+ F + + ++Y++++ V+ N ++ A F ++K+
Sbjct: 523 MIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKK- 581
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P+V T+T++I G+C+ G + A+KVF+ M +PN++ Y +I FCK+G+L +A
Sbjct: 582 TCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKA 641
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGL---------------------------------- 271
+M+ C PN+ T+N ++ GL
Sbjct: 642 CFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDW 701
Query: 272 ------------CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
C + V A L KM GF + + ++L GLC+ G+
Sbjct: 702 RIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQD----W 757
Query: 320 RNVMEANMNPD----VKSYEVVINGFCKIGKSDEAISLLKEM 357
NV+ N N Y ++ F G + +A LL+ +
Sbjct: 758 NNVIPCNFNERQLQIAVKYSEKLDQFLSEGLTSDASLLLQTL 799
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 87/207 (42%), Gaps = 50/207 (24%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
+F S +I Y + +++ A+ F + + ++ SL+ R + AE+ F
Sbjct: 551 DEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVF 610
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV------------------- 222
++ + P+V TYT +I +CK G + A F+ M +
Sbjct: 611 EEM-RSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTN 669
Query: 223 -------------KPNLL-----------------AYNTMINGFCKKGELEEAKKCMNEM 252
+PNL AYN+++ C+ ++ A + ++M
Sbjct: 670 NNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKM 729
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDE 279
M++G P+ +++ A+++GLC+ GR+ +
Sbjct: 730 MSKGFPPDPVSFIALLHGLCLEGRLQD 756
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 169/343 (49%), Gaps = 13/343 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK-- 186
++ A ++G V + + + SYN++L L EE ++V+
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVH 243
Query: 187 -------ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
E+ PD+ Y T+I G CK G E A + M +KPN++ YNT++ G
Sbjct: 244 EALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGL 303
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C EEA+ + EM C +++T+N ++ C NG VD L+ +M +G +V
Sbjct: 304 CSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDV 363
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ +++ G C G D+AV L+N+ P+ SY +V+ G C+ + +A L+
Sbjct: 364 ITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISH 423
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +G P +FN + + + G ++AI LLKQM C P+ +SY+T+I GL A G
Sbjct: 424 MIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA-G 482
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ ++ +L++ MI G + +YS + EG + ++Q+
Sbjct: 483 KTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQM 525
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 157/311 (50%), Gaps = 5/311 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN++L L + AE+ ++ +E+ P D T+ ++ +C+ G+++ ++ + M
Sbjct: 296 YNTVLKGLCSAERWEEAEDLLAEMFQEDC-PLDDVTFNILVDFFCQNGLVDRVIELLEQM 354
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
P+++ Y T+INGFCK+G ++EA + M GC+PN ++Y ++ GLC R
Sbjct: 355 LEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERW 414
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A+ L++ M G N T +++ +C G +QA+ L+ ++ +PD+ SY V
Sbjct: 415 VDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTV 474
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G K GK++EA+ LL M +G+ P ++++ L G D+ I + +
Sbjct: 475 IDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATV 534
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ YN +I LC + D M+ +G + + Y+ L++G EG V
Sbjct: 535 RSDAALYNAVISSLC-KRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ 593
Query: 458 QIAHEMVTKKG 468
+ E+ +++
Sbjct: 594 DLLSELCSRRA 604
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 170/371 (45%), Gaps = 25/371 (6%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+S++A+ + +S LI++ G A A + A + +YN+++
Sbjct: 29 VSVSAAATAPLDAGGSGRLSALIRSLCAAGRTADAARALDTAG---DAAGVVAYNAMIAG 85
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---- 223
R + A + VPP+ TY ++R C G+I +A V D M ++
Sbjct: 86 YCRAGQVAAARRLAAAVP----VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAA 141
Query: 224 -PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P + + ++ C+ G A + + + +GC + N ++ +C G VDE
Sbjct: 142 TPPMC--HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVE 199
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY----------LRNVMEANMNPDVK 332
L+ K+ G + ++ ++ ++LKGLC+ ++D L + E PD++
Sbjct: 200 LLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLR 259
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
Y +I+G CK G + A +L M + GLKP V +N V + L + A LL +M
Sbjct: 260 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 319
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
Q DC + V++N ++ C G + V +L+++M+ G D Y+ ++ G+C+EG
Sbjct: 320 FQEDCPLDDVTFNILVDFFCQ-NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 378
Query: 453 VENVMQIAHEM 463
V+ + + M
Sbjct: 379 VDEAVMLLKNM 389
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 181/364 (49%), Gaps = 28/364 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++ + G ++ A F + K EN SYN L LVR+ + A+ ++V
Sbjct: 206 MLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMG 265
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P+V +Y ++ G CK G++ +A+ + +MT V P+ + Y T+++G+C G++ EA
Sbjct: 266 -MEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEA 324
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ EMM GC PN T N ++Y L GR+ EA+ L+ KM G+ + T ++ G
Sbjct: 325 NNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDG 384
Query: 306 LCVVGKFDQAV-------------------GYLRNVMEANMN----PDVKSYEVVINGFC 342
LC GK D+A+ Y+ V +++ PD+ SY +I+G C
Sbjct: 385 LCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLC 444
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K G+ EA EM + L+P ++ + G++ A +LK M + C
Sbjct: 445 KAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQ 504
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YN++I GL +K ++ ++ L+D M G + D ++Y+ +L CE G V++ + E
Sbjct: 505 TYNSLIMGL-GSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDE 563
Query: 463 MVTK 466
M+ K
Sbjct: 564 MLQK 567
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 172/348 (49%), Gaps = 42/348 (12%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++N L+G+L + A E F ++ ++ P + S + ++RGYC+ G ++
Sbjct: 57 YTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYS-FGILVRGYCRAGFTSKGLELLG 115
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M PN + YNT+I+ FCK+G+ ++A+K ++EM G P+ +T+NA I LC +G
Sbjct: 116 EMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSG 175
Query: 276 RVDEAKMLMAKMRLNGF----KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
+V EA + M+++ + N+ T+ ML G C G ++A + + +
Sbjct: 176 KVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNR 235
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+SY + + G +IGK EA +LKEM G++P V+S+N V L +NG L A +L++
Sbjct: 236 ESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRL 295
Query: 392 MPQMDCLPNFVSYNTIICGLCMA----------------------------------KGR 417
M LP+ V+Y T++ G C +GR
Sbjct: 296 MTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGR 355
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ + E+L+ +M G+ +D + ++ G C G ++ ++I + M T
Sbjct: 356 ISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWT 403
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 168/373 (45%), Gaps = 68/373 (18%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ + AE+ ++ K+ + PDV T+ I C G + A ++F M
Sbjct: 129 YNTLISSFCKEGKTDDAEKLVDEMRKDGL-SPDVVTFNARISALCSSGKVLEASRIFRDM 187
Query: 221 TV-------KPNLLAYNTMINGFCKKGELEEAKK-------------------------- 247
+ +PN++ YN M+ GFCK+G LEEA+
Sbjct: 188 QIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVR 247
Query: 248 ---------CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ EM++ G PN +YN ++ GLC NG + +A+MLM M +G + T
Sbjct: 248 IGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVT 307
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ ++L G C GK +A LR +M +P+ + +++ K G+ EA LL++M
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQM-----------------------PQM 395
+G + N V L NG+LD+AI ++ M +
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C+P+ +SY+TII GLC A GR+ + + M+ D +Y + +C+EG + +
Sbjct: 428 KCMPDLISYSTIISGLCKA-GRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISS 486
Query: 456 VMQIAHEMVTKKG 468
++ +M KKG
Sbjct: 487 AFRVLKDM-EKKG 498
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 140/316 (44%), Gaps = 43/316 (13%)
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKK 247
PP + Y ++R K G ++ + M V P +N +I C G L++A++
Sbjct: 18 PPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARE 77
Query: 248 CMNEMMNRGCRPNE-----------------------------------LTYNAMIYGLC 272
++M +GC PNE + YN +I C
Sbjct: 78 LFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFC 137
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM----N 328
G+ D+A+ L+ +MR +G +V T + + LC GK +A R++ +
Sbjct: 138 KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P++ +Y +++ GFCK G +EA +L ++M+ S+N LV G+L A L+
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
LK+M M PN SYN ++ GLC G + D L+ M SG D Y+ LL GYC
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDGLC-KNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYC 316
Query: 449 EEGNVENVMQIAHEMV 464
G V + EM+
Sbjct: 317 HTGKVSEANNVLREMM 332
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 143/280 (51%), Gaps = 13/280 (4%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKC 248
PD+ +Y+T+I G CK G + AKK F M ++P+ Y+ I+ FCK+G++ A +
Sbjct: 431 PDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRV 490
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +M +GC TYN++I GL ++ E L+ +MR G +VS + ++L LC
Sbjct: 491 LKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCE 550
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK---IGKSDEAISLLKEMRARGLKPT 365
G+ A L +++ ++P++ S+ ++I FCK DE + + G K
Sbjct: 551 GGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEI--ALNVCGHKEA 608
Query: 366 VFSFNAVFRILVENGELDRAILLLK-QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++S F L+ GE+ +A L + + + + NF+ Y +I LC + ++ D +
Sbjct: 609 LYSL--TFNELLVGGEVVKAKELFETALDRSFDVGNFL-YKDLIDHLCKDE-KLDDASGI 664
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ ++I G+ D + ++ G + GN ++A +M+
Sbjct: 665 LHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMM 704
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 154/380 (40%), Gaps = 101/380 (26%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+YSYN ++ L + N + +++ + V PD TYTT++ GYC G + A V
Sbjct: 270 VYSYNIVMDGLCK-NGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVL 328
Query: 218 DVM---TVKPN-----LLAY------------------------------NTMINGFCKK 239
M PN +L Y N +I+G C
Sbjct: 329 REMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNN 388
Query: 240 GELEEAKKCMNEMMNRG-----------------------CRPNELTYNAMIYGLCINGR 276
G+L++A + +N M G C P+ ++Y+ +I GLC GR
Sbjct: 389 GKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGR 448
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V EAK +M M N+ PD Y+V
Sbjct: 449 VGEAKKKFIEM-----------------------------------MGKNLQPDSAIYDV 473
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
I+ FCK GK A +LK+M +G T+ ++N++ L ++ L+ +M +
Sbjct: 474 FIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERG 533
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN---V 453
P+ YN ++ LC GR++D ++D M++ G + + + +S L+K +C+ + V
Sbjct: 534 VSPDVSIYNNVLSSLCEG-GRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAV 592
Query: 454 ENVMQIAHEMVTKKGRLLKL 473
+ + +IA + K L L
Sbjct: 593 DEIFEIALNVCGHKEALYSL 612
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 162/356 (45%), Gaps = 39/356 (10%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+ N LL L + I AEE ++ ++ V D T +I G C G ++ A ++ +
Sbjct: 341 YTCNILLYSLWKEGRISEAEELLQKMNEKGYVI-DTVTCNIVIDGLCNNGKLDKAIEIVN 399
Query: 219 VMTVK--------------------------PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
M P+L++Y+T+I+G CK G + EAKK EM
Sbjct: 400 GMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEM 459
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
M + +P+ Y+ I+ C G++ A ++ M G + T+ S++ GL +
Sbjct: 460 MGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQI 519
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+ G + + E ++PDV Y V++ C+ G+ +A S+L EM +G+ P + SF+ +
Sbjct: 520 FEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSIL 579
Query: 373 FRILVENGELDRAI----LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ + + + L + L + +++N ++ G + K + + E +DR
Sbjct: 580 IKAFCKACDFSAVDEIFEIALNVCGHKEALYS-LTFNELLVGGEVVKAK-ELFETALDRS 637
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
G+ L Y L+ C++ +++ I H+++ KG +F+ V+D L
Sbjct: 638 FDVGNFL----YKDLIDHLCKDEKLDDASGILHKLID-KGYWFDPASFMP-VIDGL 687
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 38/275 (13%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L SY++++ L + + A++ F +++ +N+ PD + Y I +CK G I +A +V
Sbjct: 433 LISYSTIISGLCKAGRVGEAKKKFIEMMGKNL-QPDSAIYDVFIHSFCKEGKISSAFRVL 491
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K L YN++I G K ++ E ++EM RG P+ YN ++ LC
Sbjct: 492 KDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEG 551
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC--------------------------- 307
GRV +A ++ +M G N+S+ ++K C
Sbjct: 552 GRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYS 611
Query: 308 -------VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
V G+ +A ++ + + Y+ +I+ CK K D+A +L ++ +
Sbjct: 612 LTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDK 671
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
G SF V L + G A L ++M +M
Sbjct: 672 GYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEM 706
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 53/280 (18%)
Query: 107 LISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNS 163
I + L+ + + D FI K G + +A F K +E C L +YNS
Sbjct: 456 FIEMMGKNLQPDSAIYDVFIHSFCK----EGKISSA---FRVLKDMEKKGCNKTLQTYNS 508
Query: 164 LLGVLVRVNSIKLAEEFFHQI--VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
L+ L N I E + I ++E V PDVS Y ++ C+ G +++A V D M
Sbjct: 509 LIMGLGSKNQIF---EIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEML 565
Query: 221 --TVKPNLLAYNTMINGFCKK----------------------------------GELEE 244
+ PN+ +++ +I FCK GE+ +
Sbjct: 566 QKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVK 625
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
AK+ ++R Y +I LC + ++D+A ++ K+ G+ + ++ ++
Sbjct: 626 AKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVID 685
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
GL G +A +ME VK+ +V N C I
Sbjct: 686 GLGKRGNKHEADELAEKMMEMASEGKVKN-KVHQNASCSI 724
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 173/341 (50%), Gaps = 5/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IKA G V AI F + +Y+Y +L+ L + + I A ++ +
Sbjct: 205 VIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDG 264
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P V T+ +I G CK G + A K+ D M +K PN + YNT+I+G C KG+LE+A
Sbjct: 265 CFPSPV-TFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKA 323
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ M++ C PN +TY +I GL GR + ++A M G+ N + +++ G
Sbjct: 324 ISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISG 383
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L GK +A+ + + + Y VI+G C+ GK D+A+ +L EM +G P
Sbjct: 384 LFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPN 443
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++ +++ + E G RA+ + K M + + N V Y+ +I GLC G++++ +
Sbjct: 444 AYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLC-KDGKVKEAMMVW 502
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+M+ G D YS ++ G G VE+ MQ+ +EM+ +
Sbjct: 503 TQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQ 543
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 164/340 (48%), Gaps = 34/340 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQ-AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
+ KAYG + A+ F + A + E S+NS+L V+++ A EF++ ++
Sbjct: 131 IFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVI-- 188
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK 247
AK V ++ PN+L +N +I CK G +++A +
Sbjct: 189 ------------------------GAKGV----SISPNVLTFNLVIKAMCKVGLVDDAIQ 220
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+M R C P+ TY ++ GLC R+DEA L+ +M+++G + T ++ GLC
Sbjct: 221 VFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLC 280
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G +A + N+ P+ +Y +I+G C GK ++AISLL M + P V
Sbjct: 281 KKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVV 340
Query: 368 SFNAVFRILVENGE-LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++ + LV+ G LD A +L + C+ +V Y+T+I GL +G+ Q+ L
Sbjct: 341 TYGTIINGLVKQGRALDGACVLALMEERGYCVNEYV-YSTLISGL-FKEGKSQEAMHLFK 398
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M G+ L+ +YS ++ G C +G ++ +++ EM K
Sbjct: 399 EMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNK 438
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 5/238 (2%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y+T+I G K G + A +F MTVK N + Y+ +I+G C+ G+ ++A + ++EM
Sbjct: 377 YSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMT 436
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
N+GC PN T ++++ G G A + M + F N + ++ GLC GK
Sbjct: 437 NKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 496
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG--LKPTVFSFNA 371
+A+ ++ PDV +Y +ING G ++A+ L EM +G +P V ++N
Sbjct: 497 EAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNI 556
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ L + + RAI LL M C P+ V+ + L QD + +D ++
Sbjct: 557 LLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDELV 614
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 88/161 (54%), Gaps = 4/161 (2%)
Query: 310 GKFDQAVGYLRNVMEA---NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
G F +A+ + +V+ A +++P+V ++ +VI CK+G D+AI + ++M R +P V
Sbjct: 175 GLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDV 234
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+++ + L + +D A+ LL +M C P+ V++N +I GLC KG + LVD
Sbjct: 235 YTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLC-KKGDLSRAAKLVD 293
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
M G + Y+ L+ G C +G +E + + MV+ K
Sbjct: 294 NMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK 334
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 198/433 (45%), Gaps = 17/433 (3%)
Query: 37 SPKNISSQPLDQFSLC--LGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPC 94
SP SS ++ C + +I + +P HAL FN ++H
Sbjct: 39 SPTETSSTLVETGRKCKFISHESAINLIKREKDPQHALEIFNMVGEQK----GFNHNHAT 94
Query: 95 YTAITDVLLS----HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ + L H++ ++ + + K + L+K + + + F+ +
Sbjct: 95 YSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMKHFYKSSLHERVLEMFYAIQ 154
Query: 151 QI-ENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
I L + ++ L +LV I LA++ + + V P+ + +++ +CK G
Sbjct: 155 PIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGD 214
Query: 210 IENAKKVFDVMTVK----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPNELTY 264
+E+A +V M PN++ Y+T+I+G C G L+EA + EM+++ P+ LTY
Sbjct: 215 LESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTY 274
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+ +I G C G+ D A+ +M MR NG NV + ++ G C G+ ++A +
Sbjct: 275 SVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKS 334
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ + PD Y +IN FC +G+ DEA+ LLKEM K +FN + + L G D
Sbjct: 335 SGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDE 394
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A+ +L+ + N SY ++ LC KG ++ L+ M+ G + + LL
Sbjct: 395 ALRMLENLAYEGVYLNKGSYRIVLNFLCQ-KGELEKSCALLGLMLSRGFVPHYATSNELL 453
Query: 445 KGYCEEGNVENVM 457
CE G V+N +
Sbjct: 454 VCLCEAGMVDNAV 466
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 173/333 (51%), Gaps = 7/333 (2%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
+ + + ++ ++ C++ N L+ + ++ A E H++ K P+V TY+
Sbjct: 182 AQKCLLYVNEHLKVRPNTCIF--NILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYS 239
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T+I G C G ++ A ++F+ M K P+ L Y+ +I GFC G+ + A+K M M +
Sbjct: 240 TLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRS 299
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
GC PN Y+ ++ G C GR++EAK + +M+ +G K + + +++ C VG+ D+
Sbjct: 300 NGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDE 359
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+ L+ + E D ++ V++ G C+ G+ DEA+ +L+ + G+ S+ V
Sbjct: 360 AMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLN 419
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L + GEL+++ LL M +P++ + N ++ LC A G + + + + + G
Sbjct: 420 FLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEA-GMVDNAVTALFGLTQMGFT 478
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ ++ L++ C E + V ++ E+V K+
Sbjct: 479 PEPKSWAHLIEYICRERKLLFVFELVDELVEKE 511
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 186/357 (52%), Gaps = 6/357 (1%)
Query: 111 AASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV 169
AA L + SD ++ S LI AY + G ++ AI + ++ + + +L L+
Sbjct: 34 AAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLM 93
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNL 226
++ KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P+
Sbjct: 94 KLKYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSA 152
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
++YNT++NG+ + G L+E + + M+ G +P+ TY+ +I GLC ++D+A L +
Sbjct: 153 VSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDE 212
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M + G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 213 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 272
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
+A L+ +M +GLKP ++ + + G L A K++ Q + + V Y
Sbjct: 273 LKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTA 332
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I GLC +GR D E ++ M+ G N D Y+ ++ +C++G+V ++ EM
Sbjct: 333 LISGLCQ-EGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEM 388
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 155/291 (53%), Gaps = 6/291 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G+++ A F + SYN+L+ +R+ L E F
Sbjct: 118 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGV--LDEGFRLK 175
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK +++A ++FD M VK PN + + T+I+G CK
Sbjct: 176 SAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKN 235
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + +A L+ M G K + T+
Sbjct: 236 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITY 295
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G A + + +++ N+ D Y +I+G C+ G+S +A +L+EM +
Sbjct: 296 TTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLS 355
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
GL P ++ + + G++ + LLK+M + +P+ V+YN ++ G
Sbjct: 356 VGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 406
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 171/341 (50%), Gaps = 5/341 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S + A+ G V+ A+ F Q + ++Y L+ + + A ++V+
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR 356
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ V P +V TYT ++ G CK + A+ V +M V+ N L Y T+I+G E
Sbjct: 357 QGV-PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A ++EM N+G + Y A+I GLC ++DEAK L+ KM +G + N + +M+
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GK +A+ L+ ++++ P+V +Y +I+G CK G DEAIS +MR GL
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++ A+ L +NG L+ A+ L +M + V Y ++ G + +G + D
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY-LKQGNLHDAFA 594
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L +MI SG LD Y+C + G+C + ++ EM+
Sbjct: 595 LKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMI 635
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 192/391 (49%), Gaps = 14/391 (3%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFF-ISKLIKAYGDRGN 138
P PN + + + D L ++ A SL +K L D + LI YG G
Sbjct: 184 PAPNVFT-----FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGE 238
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
+ + ++ A + +YN+L+ + ++ A +F + +E V+ +V T++
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA-NVVTFS 297
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
T + +CK G++ A K+F M V+ N Y +I+G CK G L++A ++EM+ +
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQ 357
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G N +TY ++ GLC +V EA+ ++ M G + N + +++ G + ++A
Sbjct: 358 GVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKA 417
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+G L + + D+ Y +I G C + K DEA SLL +M GL+P + +
Sbjct: 418 LGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDA 477
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
++G++ AI +L+++ PN ++Y +I GLC A G + + ++M G +
Sbjct: 478 CFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKA-GSIDEAISHFNKMRDLGLDP 536
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ Y+ L+ G C+ G + +Q+ +EMV K
Sbjct: 537 NVQAYTALVDGLCKNGCLNEAVQLFNEMVHK 567
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 149/282 (52%), Gaps = 2/282 (0%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEE 244
V+E VPP+ T ++ + +++F+ + PN+ +N +I+ CK+GEL E
Sbjct: 148 VRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-PNVFTFNIVIDFLCKEGELAE 206
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A+ + M GC P+ +T+N++I G G +DE + L+ +MR +G K +V T+ +++
Sbjct: 207 ARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALIN 266
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
C G+ + A GY + + +V ++ ++ FCK G EA+ L +MR RG+
Sbjct: 267 CFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMAL 326
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
F++ + + G LD AI+LL +M + N V+Y ++ GLC + ++ + ED+
Sbjct: 327 NEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKER-KVAEAEDV 385
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M ++G + +Y+ L+ G+ N E + + EM K
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 39/274 (14%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
D+S Y +I+G C + ++ AK + D ++PN + Y TM++ K G++ EA +
Sbjct: 432 DISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAML 491
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++++ G +PN +TY A+I GLC G +DEA KMR G NV + +++ GLC
Sbjct: 492 QKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKN 551
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G ++AV ++ M+ D Y +++G+ K G +A +L +M GL+ +F
Sbjct: 552 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLF-- 609
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
C F+S C L M M + ++ MI
Sbjct: 610 ---------------------------CYTCFISG---FCNLNM----MPEAREVFSEMI 635
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G D +Y+CL+ Y + GN+E + + EM
Sbjct: 636 GHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 12/320 (3%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT + D L ++ A +L K + ++ + LI + N + A+ + K
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ Y +L+ L V+ + A+ ++ E+ + P+ YTTM+ K G +
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM-DESGLEPNYIIYTTMMDACFKSGKV 484
Query: 211 ENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
A +K+ D +PN++ Y +I+G CK G ++EA N+M + G PN Y A
Sbjct: 485 PEAIAMLQKILDS-GFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTA 543
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
++ GLC NG ++EA L +M G + + ++L G G A ++++
Sbjct: 544 LVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG 603
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ D+ Y I+GFC + EA + EM G+ P +N + + G L+ AI
Sbjct: 604 LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663
Query: 387 LLLKQMPQMDCLPNFVSYNT 406
L +M ++ LP+ +T
Sbjct: 664 SLQDEMERV--LPSCTDSDT 681
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+SI +LK + I L+ + R V A+ + +I + +YN+++
Sbjct: 140 LSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---P 224
L + + A +FF +I ++ + P+V TYT ++ G C +A ++ M K P
Sbjct: 200 LCKTKRVNDAFDFFKEIERKG-IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N++ Y+ +++ F K G++ EAK+ EM+ P+ +TY+++I GLC++ R+DEA +
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G +V ++ +++ G C + + + R + + + + +Y +I GF +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G D+A +M G+ P ++++N + L +NGEL++A+++ + M + + + V+Y
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
T+I G+C G++++ L + G D Y+ ++ G C +G + V + +M
Sbjct: 439 TTVIRGMCKT-GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 148/277 (53%), Gaps = 13/277 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++LL V+ + A+E F ++V+ ++ PD+ TY+++I G C I+ A ++FD+
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K ++++YNT+INGFCK +E+ K EM RG N +TYN +I G G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A+ ++M G ++ T+ +L GLC G+ ++A+ ++ + M+ D+ +Y
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI G CK GK +EA SL + +GLKP + ++ + L G L L +M Q
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+ N + ++ G + +L+ +M+ G+
Sbjct: 501 LMKNDCT---------LSDGDITLSAELIKKMLSCGY 528
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 155/298 (52%), Gaps = 5/298 (1%)
Query: 170 RVNSIKL--AEEFFHQIVKENVVPP--DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPN 225
R+ IKL A + F +VK P D + + I K ++ + K +V+ ++ +
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
L +N +IN FC ++ A + +M+ G P+ +T +++ G C RV +A L+
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
KM G+K ++ + +++ LC + + A + + + + P+V +Y ++NG C
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ +A LL +M + + P V +++A+ V+NG++ A L ++M +M P+ V+Y+
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++I GLC+ R+ + + D M+ G D Y+ L+ G+C+ VE+ M++ EM
Sbjct: 300 SLINGLCL-HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 144/274 (52%), Gaps = 4/274 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D+ T+ +I +C + A + M +P+ + +++NGFC++ + +A +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++M+ G +P+ + YNA+I LC RV++A ++ G + NV T+ +++ GLC
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
++ A L ++++ + P+V +Y +++ F K GK EA L +EM + P + ++
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+++ L + +D A + M CL + VSYNT+I G C AK R++D L M
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK-RVEDGMKLFREMS 357
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G + Y+ L++G+ + G+V+ + +M
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L + + K+D + + + + D+ ++ +VIN FC + A+S+L +M G
Sbjct: 91 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 150
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+P + ++ + A+ L+ +M ++ P+ V+YN II LC K R+ D
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK-RVNDA 209
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D + R G + Y+ L+ G C + ++ +M+ KK
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 180/354 (50%), Gaps = 25/354 (7%)
Query: 119 NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIK 175
NKL D FI G V+ A+ F I+ G ++S+N ++ + +V ++
Sbjct: 202 NKLMDLFIG--------HGRVQDAVALFE--GWIQGGVYSPDVWSFNVVIKGVCKVGDVQ 251
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM----TVKPNLLAYNT 231
A E ++ E PD T+ ++ G C+ + ++V + PN++ Y +
Sbjct: 252 KALELVERM-DEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTS 310
Query: 232 MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG 291
+I+G+CK G +E+A N+M+ G PN +TYN +I G G + A + +M L
Sbjct: 311 VISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRR 370
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
+V T S++ G C G+ D A+ + + ++ P+ ++ ++I+ FCK +S EA+
Sbjct: 371 CLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEAL 430
Query: 352 SLLKEMRAR-GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
LK+M R + P F +N V +L + G++D A ++L +M + C P+ +Y +I G
Sbjct: 431 HFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIG 490
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDF----TMYSCLLKGYCEEGNVENVMQIA 460
CM KGR+ + +M+ +G + D + SCLLK G V+++M+IA
Sbjct: 491 HCM-KGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSG-MPGEVDHIMRIA 542
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 140/324 (43%), Gaps = 42/324 (12%)
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PN----------- 225
H + +PP +Y +I C+ G +A ++FD MT + PN
Sbjct: 114 LHSPHSQLAMPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSC 173
Query: 226 ------------------------LLAYNTMINGFCKKGELEEAKKCMNEMMNRGC-RPN 260
AYN +++ F G +++A + G P+
Sbjct: 174 AAAGLLDAAAALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPD 233
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
++N +I G+C G V +A L+ +M G + TH ++ GLC + + LR
Sbjct: 234 VWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLR 293
Query: 321 NVMEANMN-PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ + P+V +Y VI+G+CK G+ ++A+++ +M A G P V ++N + +
Sbjct: 294 RLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKA 353
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
G + A+ + +QM CLP+ V+++++I G C G++ D + M + +
Sbjct: 354 GNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRC-GQLDDAMKIWTEMAQYHIQPNAHT 412
Query: 440 YSCLLKGYCEEGNVENVMQIAHEM 463
+ ++ +C++ + +M
Sbjct: 413 FCIIIHTFCKQNRSGEALHFLKKM 436
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 180/380 (47%), Gaps = 43/380 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+K D G V A+ F +A + + +Y +L+ L + A+ ++V
Sbjct: 96 TTLMKGLCDAGRVVEALEHF-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVA 154
Query: 187 ENVVPPDVSTYTTMIRGYCKMGM------------------------------------I 210
+ P D T++T+I G CK G +
Sbjct: 155 QGCAP-DTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSV 213
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
E A KV V+ K P +L +N +INGFCK +L+ A K + M+ +GC PN T+ +
Sbjct: 214 ELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTIL 273
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC RV EA+ L+ KM + G NV T+ +++ GLC G+ D A + + N
Sbjct: 274 ITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNC 333
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P+V ++ ++I+G CK + +EA L MR G P + ++N++ L ++ ++D A
Sbjct: 334 PPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQ 393
Query: 388 LLKQMPQMD-CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L + +P+ N V+Y+T+ G A GRM D + ++ G + D Y+ L+
Sbjct: 394 LFQTIPESGVSAANAVTYSTLFHGY-AALGRMADACRIFSMLVDKGFSPDLATYTSLILE 452
Query: 447 YCEEGNVENVMQIAHEMVTK 466
YC+ V+++ EM +K
Sbjct: 453 YCKTSRAVEVVELVEEMASK 472
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 150/294 (51%), Gaps = 9/294 (3%)
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--VKPNLLAYN 230
+I+L EE + N V +TT+++G C G + A + F M P+++ Y
Sbjct: 76 AIQLLEEMKSSGFEGNAV-----VHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYT 130
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+++ CK G+ +EA+ + EM+ +GC P+ +T++ +I GLC G ++A ++ +
Sbjct: 131 ALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQR 190
Query: 291 GFKDNVSTHKSMLKGLC-VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G ++ + +++++ LC + A L V+ P V + +VINGFCK D
Sbjct: 191 GMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDS 250
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A LL+ M +G P VF+F + L + + A LL++M C PN V+Y+T+I
Sbjct: 251 AYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVIN 310
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC +G++ D +L M R + ++ L+ G C+ +E Q+ H M
Sbjct: 311 GLC-KQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 363
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 38/276 (13%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN Y +I GF G+L+ A + + EM + G N + + ++ GLC GRV EA
Sbjct: 55 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEH 114
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M + D V T+ +++ LC GKFD+A G LR ++ PD ++ +I+G CK
Sbjct: 115 FRAMAKDCAPD-VMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCK 173
Query: 344 IGKSDEAISLLKE------------------------------------MRARGLKPTVF 367
G ++A +L++ + A+G PTV
Sbjct: 174 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 233
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
FN V + +LD A LL+ M + C+PN ++ +I GLC A R+ + + L+++
Sbjct: 234 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKAN-RVGEAQQLLEK 292
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M+ G + + YS ++ G C++G V++ ++ M
Sbjct: 293 MVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLM 328
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 164/380 (43%), Gaps = 44/380 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I +G V A F ++ + ++N L+ L + I+ A + +H++ +
Sbjct: 306 STVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM-R 364
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM----TVKPNLLAYNTMINGFCKKGEL 242
E PD+ TY ++I G CK ++ A ++F + N + Y+T+ +G+ G +
Sbjct: 365 ETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRM 424
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+A + + ++++G P+ TY ++I C R E L+ +M GF V+T ++
Sbjct: 425 ADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAV 484
Query: 303 LKGL--------------------CV---------------VGKFDQAVGYLRNVMEA-- 325
L GL C K D+A+ L V++
Sbjct: 485 LGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRD 544
Query: 326 -NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
NP + + ++ C++GK+D+A LL +M RG V S+N + L D
Sbjct: 545 RKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDE 604
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A + + M P + N +I LC A ++ D +LV RM + G D + L+
Sbjct: 605 ATQVFEAMVSAGPAPEISTVNVVISWLCSA-AKVDDAYELVQRMSKLGCCPDIETCNTLI 663
Query: 445 KGYCEEGNVENVMQIAHEMV 464
GYC+ G + ++ EM
Sbjct: 664 GGYCKSGRADLARKLLEEMT 683
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 126/245 (51%), Gaps = 1/245 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
V N+ + N ++ C+ +EA M R C PN+ TY +I G G +D A
Sbjct: 18 VGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAI 77
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L+ +M+ +GF+ N H +++KGLC G+ +A+ + R M + PDV +Y +++
Sbjct: 78 QLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFR-AMAKDCAPDVMTYTALVHAL 136
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK GK DEA +L+EM A+G P +F+ + L + G ++A +L+ + Q +
Sbjct: 137 CKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSD 196
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
++ TII LC ++ ++ +I G M++ ++ G+C+ ++++ ++
Sbjct: 197 AAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLE 256
Query: 462 EMVTK 466
M+ K
Sbjct: 257 VMIEK 261
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 42/345 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI ++ A +H+ ++ + +YNSL+ L + + A + F I +
Sbjct: 343 LIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESG 402
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK------- 238
V + TY+T+ GY +G + +A ++F ++ K P+L Y ++I +CK
Sbjct: 403 VSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEV 462
Query: 239 ---------KG-------------------ELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
KG E A + + M RGC + L YN ++ G
Sbjct: 463 VELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEG 522
Query: 271 LCINGRVDEAKMLMAKM---RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ + D+A ++ ++ R F + S ++++ LC VGK D A L + E
Sbjct: 523 MARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGF 582
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
V SY +++G ++ + DEA + + M + G P + + N V L ++D A
Sbjct: 583 AAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYE 642
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L+++M ++ C P+ + NT+I G C + GR L++ M +G
Sbjct: 643 LVQRMSKLGCCPDIETCNTLIGGYCKS-GRADLARKLLEEMTEAG 686
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 219/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ N HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHGAKNSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SY++L V++R
Sbjct: 70 DMPKKGLEWDEDMWVL-MIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRFMMAKRYFNKMLSXG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVIT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM + P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +++ + P D + +I+ CK G
Sbjct: 248 GYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSQCKAGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKSM----IRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN I+ LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHMEPSAYNPIVEYLC-NNGQTSKAEALVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 156/322 (48%), Gaps = 15/322 (4%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHGAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +Y+A
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ + ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD----VEDLVDRMIRSGHNLDFTMYSC 442
L+++M PN ++Y+T++ GLC A+ +M + ++++VD+ I N +++
Sbjct: 241 RLVEEMKGYGIKPNAITYSTLLPGLCNAE-KMSEARSILKEMVDKYIAPTDN---SIFMR 296
Query: 443 LLKGYCEEGNVENVMQIAHEMV 464
L+ C+ GN++ + M+
Sbjct: 297 LISSQCKAGNLDAAADVLKSMI 318
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPIVEYLCNNGQTSKAEALVRQLMKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AY++++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVGSEKSAYDSLVQSYLKKSEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|255660920|gb|ACU25629.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 484
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHGSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SY++L V++R
Sbjct: 70 DMPKKGLEWDEDMWVL-MIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P + MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRFMMAKRYFNKMLSEG-IEPTRHXFNVMIWGFFLSGKVETANRFFEDMKSREISPDVIT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + +++EA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +++ M P D + +I+ CK G
Sbjct: 248 GYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYMAPTDNSIFXRLISSQCKTGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGVLIENFCKAGQHDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHMEPSAYNPMIEYLC-NNGQTAKAEALVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQTAKAEALVRQLLKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AY++++ + KK E +AK ++ M+ P+ + ++ L
Sbjct: 429 MLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVXESL 483
>gi|255660878|gb|ACU25608.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 484
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 216/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+ L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGXLIENFCKAGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++ + G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 150/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D +
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN++ + M+
Sbjct: 301 HCKSGNLDAAADVLKAMI 318
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 180/347 (51%), Gaps = 5/347 (1%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+S+ +LK + I L+ + R V A+ + +I + +YN+++
Sbjct: 140 LSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDS 199
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKP 224
L + + A +FF +I ++ + P+V TYT ++ G C G +A ++ M + P
Sbjct: 200 LCKTRRVNDALDFFKEIGRKG-IRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITP 258
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N++ Y+ +++ F K G++ EAK+ EM+ P+ +TY+++I GLC++ R+DEA +
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G +V ++ +++ G C + + + R + + + + +Y +I GF ++
Sbjct: 319 DLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQV 378
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G D+A +M + G+ P ++++N + L +NG L++A+++ + M + + + V+Y
Sbjct: 379 GDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTY 438
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
T+I G+C G+++D L + G D Y+ ++ G C +G
Sbjct: 439 TTVIQGMC-KTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 152/299 (50%), Gaps = 5/299 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+ SL+ R N + A ++V E PD+ Y +I CK + +A F
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMV-EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKE 215
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ ++PN++ Y ++NG C G +A + + +M+ R PN +TY+A++ NG+
Sbjct: 216 IGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGK 275
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V EAK + +M ++ T+ S++ GLC+ + D+A ++ PDV SY
Sbjct: 276 VLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNT 335
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+INGFCK + ++ + L ++M RGL ++N + + + G++D+A QM
Sbjct: 336 LINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFG 395
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ +YN ++ GLC G ++ + + M +S +LD Y+ +++G C+ G VE+
Sbjct: 396 VSPDIWTYNILLGGLC-DNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVED 453
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 150/277 (54%), Gaps = 11/277 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++LL V+ + A+E F ++V+ ++ PD+ TY+++I G C I+ A ++FD+
Sbjct: 262 TYSALLDAFVKNGKVLEAKEIFEEMVRMSI-DPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P++++YNT+INGFCK +E+ K +M RG N +TYN +I G G
Sbjct: 321 MVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGD 380
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A+ ++M G ++ T+ +L GLC G ++A+ ++ ++ M+ D+ +Y
Sbjct: 381 VDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTT 440
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI G CK GK ++A L + +GLKP + ++ + L G L +M Q
Sbjct: 441 VIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEG 500
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+ N +++ LC+ G + +L+ +M+ G+
Sbjct: 501 LMKN----DSM---LCLGDGDITISAELIKKMLSCGY 530
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 166/325 (51%), Gaps = 5/325 (1%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
AI F + + + +N LL +V++ + ++ + D+ T+ +I
Sbjct: 69 AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGI-RNDLYTFNIVI 127
Query: 202 RGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
+C + A V M +P+ + +++NGFC++ + +A +++M+ G R
Sbjct: 128 NCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYR 187
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P+ + YNA+I LC RV++A ++ G + NV T+ +++ GLC G+++ A
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARL 247
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
LR++++ + P+V +Y +++ F K GK EA + +EM + P + +++++ L
Sbjct: 248 LRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
+ +D A + M C P+ VSYNT+I G C AK R++D L +M + G +
Sbjct: 308 HDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAK-RVEDGMKLFRKMSQRGLVNNTV 366
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ L++G+ + G+V+ + +M
Sbjct: 367 TYNTLIQGFFQVGDVDKAQEFFSQM 391
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 121/243 (49%), Gaps = 1/243 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ +N +++ K + + +M G R + T+N +I C +V A +
Sbjct: 83 PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ KM G++ + T S++ G C + AV + ++E PD+ +Y +I+ CK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCK 202
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+ ++A+ KE+ +G++P V ++ A+ L +G + A LL+ M + PN ++
Sbjct: 203 TRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVIT 262
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ ++ + G++ + +++ + M+R + D YS L+ G C ++ Q+ M
Sbjct: 263 YSALLDAF-VKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 464 VTK 466
V+K
Sbjct: 322 VSK 324
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 1/224 (0%)
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L +A EM+ P+ + +N ++ + + D L KM + G ++++ T
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ C + A+ L +++ PD + ++NGFC+ + +A+SL+ +M
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G +P + ++NA+ L + ++ A+ K++ + PN V+Y ++ GLC + GR D
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNS-GRWND 243
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L+ MI+ + YS LL + + G V +I EMV
Sbjct: 244 AARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMV 287
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 173/347 (49%), Gaps = 13/347 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN----SIKLAEEFFH 182
S I A+ G ++ AI +F +++ ++Y SL+ + ++KL EE
Sbjct: 364 STFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQ 423
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
+K NVV TYT ++ G C+ G ++ A++VF M V PN Y +++GF K
Sbjct: 424 AGIKLNVV-----TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKA 478
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
E+E AK + EM + +P+ L Y +++GLC R++EAK+L+ +++ +G N +
Sbjct: 479 KEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIY 538
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G+ +A+ L +++ + +Y +I+G CK G EA+ M
Sbjct: 539 TTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSE 598
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
GL+P V + A+ L +N + A L +M +P+ ++Y +I G M G +Q
Sbjct: 599 IGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDG-NMKHGNLQ 657
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +L DRMI G LD Y+ L+ G G V+ + EM+ K
Sbjct: 658 EALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGK 704
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 171/361 (47%), Gaps = 42/361 (11%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG++ F A I+ +++YN ++ L + +++A F Q+ KE PD+
Sbjct: 235 RGDLSRKFFKDMGAAGIKRS--VFTYNIMIDYLCKEGDLEMARSLFTQM-KEAGFTPDIV 291
Query: 196 TYTTMIRGYCKMGMIENAKKVF----------DVMT------------------------ 221
TY ++I G+ K+G+++ +F DV+T
Sbjct: 292 TYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEM 351
Query: 222 ----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+KPN++ Y+T I+ FCK+G L+EA K +M PNE TY ++I C G +
Sbjct: 352 KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNL 411
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L+ ++ G K NV T+ ++L GLC G+ +A R ++ A + P+ ++Y +
Sbjct: 412 AEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTAL 471
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++GF K + + A +LKEM+ + +KP + + + L L+ A LL+ ++ +
Sbjct: 472 VHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGI 531
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
N V Y T++ G+ + L++ M+ G Y L+ G C+ G V+ M
Sbjct: 532 NTNAVIYTTLMDAY-FKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAM 590
Query: 458 Q 458
Sbjct: 591 H 591
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 141/280 (50%), Gaps = 4/280 (1%)
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEE 244
NV P + + ++GM+E A + F M V P + N +++ K G +
Sbjct: 179 NVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDL 238
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
++K +M G + + TYN MI LC G ++ A+ L +M+ GF ++ T+ S++
Sbjct: 239 SRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLID 298
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G +G D+ + + +A+ +PDV +Y +IN FCK + +A L EM+A GLKP
Sbjct: 299 GHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKP 358
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
V +++ + G L AI M ++ PN +Y ++I C A G + + L
Sbjct: 359 NVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKA-GNLAEALKL 417
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
V+ ++++G L+ Y+ LL G CEEG ++ ++ M+
Sbjct: 418 VEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 457
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 44/380 (11%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLS----DFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ D ++ A + +++ +F + LI A GN+ A+ +
Sbjct: 363 YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEIL 422
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
Q + +Y +LL L +K AEE F ++ V P + TYT ++ G+ K +
Sbjct: 423 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP-NQETYTALVHGFIKAKEM 481
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK--------------------- 246
E AK + M +KP+LL Y T++ G C + LEEAK
Sbjct: 482 EYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTL 541
Query: 247 --------------KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
+ EM++ G E+TY A+I GLC +G V EA +M G
Sbjct: 542 MDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGL 601
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ NV+ + +++ GLC F+ A +++ M PD +Y +I+G K G EA++
Sbjct: 602 QPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALN 661
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
L M G++ + ++ A+ L +G++ +A LL +M LP+ V Y +I
Sbjct: 662 LRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKY- 720
Query: 413 MAKGRMQDVEDLVDRMIRSG 432
A G++ + +L + M + G
Sbjct: 721 YALGKVDEALELQNEMAKRG 740
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 105/205 (51%), Gaps = 4/205 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ + A +++ ++ +V TY +I G CK G+++ A F M
Sbjct: 538 YTTLMDAYFKSGQATEALTLLEEMLDLGLIATEV-TYCALIDGLCKSGLVQEAMHHFGRM 596
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ ++PN+ Y +++G CK E AKK +EM+++G P+++ Y A+I G +G +
Sbjct: 597 SEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNL 656
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L +M G + ++ + +++ GL G+ +A L ++ + PD Y +
Sbjct: 657 QEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCL 716
Query: 338 INGFCKIGKSDEAISLLKEMRARGL 362
I + +GK DEA+ L EM RG+
Sbjct: 717 IKKYYALGKVDEALELQNEMAKRGM 741
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 171/341 (50%), Gaps = 5/341 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S + A+ G V+ A+ F Q + ++Y L+ + + A ++V+
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR 356
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ V P +V TYT ++ G CK + A+ V +M V+ N L Y T+I+G E
Sbjct: 357 QGV-PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A ++EM N+G + Y A+I GLC ++DEAK L+ KM +G + N + +M+
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GK +A+ L+ ++++ P+V +Y +I+G CK G DEAIS +MR GL
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++ A+ L +NG L+ A+ L +M + V Y ++ G + +G + D
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY-LKQGNLHDAFA 594
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L +MI SG LD Y+C + G+C + ++ EM+
Sbjct: 595 LKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMI 635
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 192/391 (49%), Gaps = 14/391 (3%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFF-ISKLIKAYGDRGN 138
P PN + + + D L ++ A SL +K L D + LI YG G
Sbjct: 184 PAPNVF-----TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGE 238
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
+ + ++ A + +YN+L+ + ++ A +F + +E V+ +V T++
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA-NVVTFS 297
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
T + +CK G++ A K+F M V+ N Y +I+G CK G L++A ++EM+ +
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQ 357
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G N +TY ++ GLC +V EA+ ++ M G + N + +++ G + ++A
Sbjct: 358 GVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKA 417
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+G L + + D+ Y +I G C + K DEA SLL +M GL+P + +
Sbjct: 418 LGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDA 477
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
++G++ AI +L+++ PN ++Y +I GLC A G + + ++M G +
Sbjct: 478 CFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKA-GSIDEAISHFNKMRDLGLDP 536
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ Y+ L+ G C+ G + +Q+ +EMV K
Sbjct: 537 NVQAYTALVDGLCKNGCLNEAVQLFNEMVHK 567
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 149/282 (52%), Gaps = 2/282 (0%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEE 244
V+E VPP+ T ++ + +++F+ + PN+ +N +I+ CK+GEL E
Sbjct: 148 VRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-PNVFTFNIVIDFLCKEGELAE 206
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A+ + M GC P+ +T+N++I G G +DE + L+ +MR +G K +V T+ +++
Sbjct: 207 ARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALIN 266
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
C G+ + A GY + + +V ++ ++ FCK G EA+ L +MR RG+
Sbjct: 267 CFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMAL 326
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
F++ + + G LD AI+LL +M + N V+Y ++ GLC + ++ + ED+
Sbjct: 327 NEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKER-KVAEAEDV 385
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M ++G + +Y+ L+ G+ N E + + EM K
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 146/324 (45%), Gaps = 12/324 (3%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT + D L ++ A +L K + ++ + LI + N + A+ + K
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ Y +L+ L V+ + A+ ++ E+ + P+ YTTM+ K G +
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM-DESGLEPNYIIYTTMMDACFKSGKV 484
Query: 211 ENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
A +K+ D +PN++ Y +I+G CK G ++EA N+M + G PN Y A
Sbjct: 485 PEAIAMLQKILDS-GFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTA 543
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
++ GLC NG ++EA L +M G + + ++L G G A ++++
Sbjct: 544 LVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG 603
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ D+ Y I+GFC + EA + EM G+ P +N + + G L+ AI
Sbjct: 604 LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663
Query: 387 LLLKQMPQMDCLPNFVSYNTIICG 410
L +M ++ LP+ +T G
Sbjct: 664 SLQDEMERV--LPSCTDSDTATDG 685
>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 481
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 216/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG +G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETXNRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGVLIENFCKVGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN I LC G+ E LV ++ + G D T + L++G +EG+ ++
Sbjct: 364 TLHLEPSAYNPXIEYLC-NNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGXSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 150/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETXNRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN++ + M+
Sbjct: 301 HCKSGNLDAAADVLKAMI 318
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN + L AE Q+ K V P + T+IRG + G ++A ++ +
Sbjct: 371 AYNPXIEYLCNNGQAXKAETLVRQLXKLGVQDP--TALNTLIRGXSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
M V AYN+++ + KK E +AK ++ M+ P+ + +++
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSXLFRSVM 480
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 183/379 (48%), Gaps = 42/379 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQ-AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
+ KAYG + A+ F + A + E + S+NS+L V+++ A EF++ ++
Sbjct: 101 IFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGA 160
Query: 188 ---NVVP----------------------------------PDVSTYTTMIRGYCKMGMI 210
N+ P PDV TY T++ G CK I
Sbjct: 161 KGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRI 220
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A + D M + P+ + +N +ING CKKG+L K ++ M +GC PNE+TYN +
Sbjct: 221 DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTL 280
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I+GLC+ G++++A L+ +M + NV T+ +++ GL G+ L + E
Sbjct: 281 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGY 340
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ + Y +I+G K GKS EA+ L KEM + + ++AV L +G+ D A+
Sbjct: 341 HVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALE 400
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+L +M C PN +Y++++ G A + +E D M + + YS L+ G
Sbjct: 401 VLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKD-MAKHNFTQNEVCYSVLIHGL 459
Query: 448 CEEGNVENVMQIAHEMVTK 466
C++G V+ M + +M+ K
Sbjct: 460 CKDGKVKEAMMVWAQMLGK 478
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 148/283 (52%), Gaps = 7/283 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ L ++ A ++V VP +V TY T+I G K G + +V +
Sbjct: 276 TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVP-NVVTYGTIINGLVKQGRALDGARVLAL 334
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + N Y+ +I+G K+G+ +EA + EM + C N + Y+A+I GLC +G+
Sbjct: 335 MEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGK 394
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
DEA ++++M N K N T+ S++KG G +A+ +++ + N + Y V
Sbjct: 395 PDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSV 454
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM--PQ 394
+I+G CK GK EA+ + +M +G KP V ++ ++ L G ++ A+ L +M +
Sbjct: 455 LIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQE 514
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
D P+ V+YN ++ LC + + DL++ M+ G + D
Sbjct: 515 PDSQPDVVTYNILLNALC-KQSSISRAIDLLNSMLDRGCDPDL 556
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 170/351 (48%), Gaps = 24/351 (6%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
K+ K+ G+ K F+ I+N A L + SL VL R+ K ++V
Sbjct: 44 DKIFKSGPKMGSYKLGDSTFYSL--IDNYANLGDFKSLEKVLDRMRCEK-------RVVV 94
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGEL 242
E + + + Y K + E A +FD M K + ++N+++N ++G
Sbjct: 95 EK-------CFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLF 147
Query: 243 EEAKKCMNEMMN-RGC--RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
A + N ++ +G PN LT+N +I +C G VD+A + M ++ + +V T+
Sbjct: 148 YRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTY 207
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ GLC + D+AV L + P ++ V+ING CK G L+ M
Sbjct: 208 CTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFL 267
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G P ++N + L G+L++AI LL +M C+PN V+Y TII GL + +GR
Sbjct: 268 KGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGL-VKQGRAL 326
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
D ++ M G++++ +YS L+ G +EG + MQ+ EM K+ L
Sbjct: 327 DGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECEL 377
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 8/226 (3%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQI-VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
Y Y++L+ L + + A + F ++ VKE + + Y+ +I G C+ G + A +V
Sbjct: 345 YVYSALISGLFKEGKSQEAMQLFKEMTVKECEL--NTIVYSAVIDGLCRDGKPDEALEVL 402
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
MT KPN Y++++ GF + G +A + +M NE+ Y+ +I+GLC +
Sbjct: 403 SEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKD 462
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM--EANMNPDVK 332
G+V EA M+ A+M G K +V + SM+ GL G + A+ ++ E + PDV
Sbjct: 463 GKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVV 522
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+Y +++N CK AI LL M RG P + + R L E
Sbjct: 523 TYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLRE 568
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 178/375 (47%), Gaps = 38/375 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A+ K + +YN+L+ ++ + A++ +I N
Sbjct: 23 LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+ P+V TYTT+I YCK +E+A ++D MTVK P+++ Y ++NG CK G++EEA
Sbjct: 83 L-EPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K EM G PN +Y +I L G V EA +L +M + G +V + +++ G
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L G + A + ++E ++ P+ +Y +I+G CK+G ++ LL+EM + + P
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA----------- 414
V ++++ + G L+ A+ ++++M Q + LPN Y T+I G A
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321
Query: 415 -----------------------KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
GRM++ ++L M+ G D Y+ ++ G+ + G
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381
Query: 452 NVENVMQIAHEMVTK 466
+ IA EM K
Sbjct: 382 KESDAFNIAQEMTEK 396
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 166/376 (44%), Gaps = 74/376 (19%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ + ++ A + ++ +++VP DV TYT ++ G CK G +E AK VF
Sbjct: 89 TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVP-DVVTYTCIMNGLCKSGKVEEAKSVFRE 147
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR------------------ 258
M V PN +Y T+I+ K+G + EA M+ RG
Sbjct: 148 MEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGM 207
Query: 259 -----------------PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
PN +TY+A+I G C G V++ ++L+ +M NV + S
Sbjct: 208 ANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS 267
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G G ++A+ +R +++ N+ P+V Y +I+G+ K + A+ L KEM++RG
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+ F ++ L +G ++ A L K M LP+ V+Y +++ G A G+ D
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA-GKESDA 386
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKG----------------------------------Y 447
++ M D Y+ L+ G Y
Sbjct: 387 FNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAY 446
Query: 448 CEEGNVENVMQIAHEM 463
C+EGN+ N +++ +EM
Sbjct: 447 CKEGNLGNALKLLNEM 462
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 189/415 (45%), Gaps = 47/415 (11%)
Query: 95 YTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAY--GDRGNVKAAIFWFHQ 148
Y++I D L++ A +++ N L + F+ LI Y D+ + +F +
Sbjct: 265 YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMK 324
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
++ +E + +S + L R ++ A+E F ++ ++P V+ YT+M+ G+ K G
Sbjct: 325 SRGLEENN--FVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN-YTSMMDGFFKAG 381
Query: 209 MIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+A + MT K +++AYN +ING K G+ E ++ M G P+ T+N
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFN 440
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
MI C G + A L+ +M+ G K N T +++ LC G+ ++ + L +++
Sbjct: 441 TMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM 500
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+P +++ V++ K ++D + + ++ G+K + ++N + G + RA
Sbjct: 501 GFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRA 560
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCM-------------------------------- 413
L+ K M L + ++YN +I G C+
Sbjct: 561 TLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620
Query: 414 --AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
A +++ LV++M G + T Y L+ G+ + GN++ +++ EM+TK
Sbjct: 621 LSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK 675
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 119/238 (50%), Gaps = 1/238 (0%)
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
+N +I+G+C+ GE+ A + + M G P+ +TYN ++ G C G + AK LM ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
L + NV T+ +++ C + A+ + ++ PDV +Y ++NG CK GK +
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
EA S+ +EM G+ P FS+ + L + G + A +L +M + V Y ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GL A G + ED+ ++ + YS L+ G+C+ G+V + EM K
Sbjct: 200 DGLFKA-GMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 102/191 (53%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M VK +L YNT+I+ FC+ G + A +MM +G + +TYNA+I+G CI+ + +
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A + ++M G NV T+ +L GL +A G + + E + P+ +Y+++++
Sbjct: 595 AFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G KIG E + L EM +G P ++N + + ++ +A L+++M P
Sbjct: 655 GHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPP 714
Query: 400 NFVSYNTIICG 410
N +Y+ +ICG
Sbjct: 715 NSSTYDILICG 725
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
+L + V+ + V+I+G+C+ G+ A+ LL+ M+ G P + ++N +
Sbjct: 4 HLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFC 63
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G+L A L+ ++ ++ PN ++Y T+I C ++ ++D + D M D
Sbjct: 64 KIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQC-LEDALYMYDEMTVKSLVPDV 122
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+C++ G C+ G VE + EM
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREM 148
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 173/330 (52%), Gaps = 24/330 (7%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLA----YNTMINGFCKKGELEEAKKC 248
D TY ++R +C G ++ A + M +P + YN ++ CK G++ EA +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M + C+P+ +T+N +I GLC GR+DEA+ ++ +M +GF N+ T+ +++ GL
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR-GLKPTVF 367
G+ +AV ++ + PD ++Y +I+GFCK G+ D A L+EM+ R G P F
Sbjct: 137 AGRSGEAVLVMQGM---TTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193
Query: 368 SFNAVFRILVENGELDRAILLLKQM-PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+++ + L ++ L +A LL++M + DC + V++NT++ G C A+ + +L+
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQD-LDRARELLS 252
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLL 486
M+ G D YS ++ G C G+V+ + +MV++ + D +
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCK-----------PDVVTY 301
Query: 487 MWIVTGGSWISRFVFVHQVVVIMERTVEDG 516
+VTG + V + +++R +EDG
Sbjct: 302 TVLVTGLCKAGKMV---EACRLVKRMLEDG 328
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 168/329 (51%), Gaps = 18/329 (5%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEE 179
+FF+ L K+ G V A+ K +++GAC + ++N+L+ L + + A++
Sbjct: 58 NFFVHALCKS----GKVPEAM---EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQ 110
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKK 239
++ + ++ TY T+I G G A V MT P+ YN +I+GFCK
Sbjct: 111 VLDEMERSGFAA-NLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKS 169
Query: 240 GELEEAKKCMNEMMNR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD---N 295
GE++ A + EM R GC P+ TY+ +I GLC + + +A L+ +M G KD +
Sbjct: 170 GEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMI--GRKDCCAS 227
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V +++ G C D+A L +++E PDV +Y +I+G C+ G D+ +LL+
Sbjct: 228 VVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLE 287
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+M +RG KP V ++ + L + G++ A L+K+M + C PN V+Y+ + GLC
Sbjct: 288 KMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKID 347
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
++ DL+ + G D + LL
Sbjct: 348 -KLDMANDLLTSIRDKGRVTDVVAFETLL 375
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 176/359 (49%), Gaps = 18/359 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYS-YNSLLGVLVRVNSIKLAEEFFHQIVKE 187
L++A+ G ++AA+ + +Q A S YN + L + + A E + K+
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM-KD 82
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEE 244
PDV T+ T+I G CK G ++ A++V D M NL+ YNT+ING G E
Sbjct: 83 GACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGE 142
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN-GFKDNVSTHKSML 303
A M M P+ TYNA+I+G C +G +D A + +M+ G + T+ ++
Sbjct: 143 AVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILI 199
Query: 304 KGLCVVGKFDQAVGYLRNVM-EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
GLC +A L+ ++ + V ++ +++G+CK D A LL M G
Sbjct: 200 NGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGC 259
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P V +++ + L G++D+ LL++M C P+ V+Y ++ GLC A G+M +
Sbjct: 260 APDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA-GKMVEAC 318
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK---KGRLLKLKNFLT 478
LV RM+ G + YS + G C+ + + +A++++T KGR+ + F T
Sbjct: 319 RLVKRMLEDGCTPNAVTYSLVFDGLCK----IDKLDMANDLLTSIRDKGRVTDVVAFET 373
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 125/230 (54%), Gaps = 5/230 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ + I A F ++ + PD TY+ +I G CK + A ++
Sbjct: 158 TYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQE 217
Query: 220 MTVKPN----LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + + ++A+NT+++G+CK +L+ A++ ++ M+ GC P+ +TY+ +I GLC G
Sbjct: 218 MIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCG 277
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
VD+ L+ KM G K +V T+ ++ GLC GK +A ++ ++E P+ +Y
Sbjct: 278 DVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYS 337
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+V +G CKI K D A LL +R +G V +F + + V+ LDRA
Sbjct: 338 LVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL-LSVKKRLLDRA 386
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 159/300 (53%), Gaps = 5/300 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L V+ + LA E ++ + N+ D Y+ +I G CK G ++NA +F+
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNI-KLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +K +++ YNT+I GFC G ++ K + +M+ R PN +T++ +I G+
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L+ +M G N T+ S++ G C + ++A+ + ++ +PD+ ++ +
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING+CK + D+ + L +EM RG+ ++N + + ++G+L+ A L ++M
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ VSY ++ GLC G ++ ++ ++ +S LD +Y ++ G C V++
Sbjct: 469 VRPDIVSYKILLDGLC-DNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 167/312 (53%), Gaps = 5/312 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N+LL L + A E ++V E P + T T++ G C G + +A + D M
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMV-EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+PN + Y ++N CK G+ A + + +M R + + + Y+ +I GLC +G +
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A L +M + GFK ++ T+ +++ G C G++D LR++++ ++P+V ++ V+
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ F K GK EA LLKEM RG+ P ++N++ + L+ AI ++ M C
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ +++N +I G C A R+ D +L M G + Y+ L++G+C+ G +E
Sbjct: 400 DPDIMTFNILINGYCKAN-RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 458 QIAHEMVTKKGR 469
++ EMV+++ R
Sbjct: 459 KLFQEMVSRRVR 470
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 162/320 (50%), Gaps = 8/320 (2%)
Query: 150 KQIENGA---CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
KQ+E+ +Y+ + ++ R + A +I+K PD + T++ G C
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGY-EPDTVIFNTLLNGLCL 170
Query: 207 MGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+ A ++ D M KP L+ NT++NG C G++ +A ++ M+ G +PNE+T
Sbjct: 171 ECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVT 230
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y ++ +C +G+ A L+ KM K + + ++ GLC G D A +
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
D+ +Y +I GFC G+ D+ LL++M R + P V +F+ + V+ G+L
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A LLK+M Q PN ++YN++I G C + R+++ +VD MI G + D ++ L
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFC-KENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 444 LKGYCEEGNVENVMQIAHEM 463
+ GYC+ +++ +++ EM
Sbjct: 410 INGYCKANRIDDGLELFREM 429
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 181/376 (48%), Gaps = 9/376 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y + +V+ ++A LL+ KL S +I G++ A F++ +
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
A + +YN+L+G + ++K + P+V T++ +I + K G +
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI-SPNVVTFSVLIDSFVKEGKL 349
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A ++ M + PN + YN++I+GFCK+ LEEA + ++ M+++GC P+ +T+N +
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C R+D+ L +M L G N T+ ++++G C GK + A + ++ +
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD+ SY+++++G C G+ ++A+ + ++ ++ + + + + ++D A
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L +P + +YN +I LC K + + L +M GH D Y+ L++ +
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISELC-RKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Query: 448 CEEGNVENVMQIAHEM 463
+ + ++ EM
Sbjct: 589 LGDDDATTAAELIEEM 604
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 127/245 (51%), Gaps = 1/245 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
+ ++ + MIN FC+ +L A M ++M G P+ + +N ++ GLC+ RV EA
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L+ +M G K + T +++ GLC+ GK AV + ++E P+ +Y V+N
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK G++ A+ LL++M R +K ++ + L ++G LD A L +M +
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
++YNT+I G C A GR D L+ MI+ + + +S L+ + +EG + Q+
Sbjct: 299 ITYNTLIGGFCNA-GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 462 EMVTK 466
EM+ +
Sbjct: 358 EMMQR 362
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 40/299 (13%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI ++ G ++ A + Q +YNSL+ + N ++ A + ++
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ PD+ T+ +I GYCK I++ ++F M+++ N + YNT++ GFC+ G+LE
Sbjct: 397 KGC-DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 244 EAKKCMNEMMNRGCRPNELTYNAM-----------------------------------I 268
AKK EM++R RP+ ++Y + I
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
+G+C +VD+A L + L G K + + M+ LC +A R + E
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD +Y ++I + A L++EM++ G V + V +L +GELD++ L
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELDKSFL 633
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 118/244 (48%), Gaps = 1/244 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P ++ +N + + K + E +M ++G + T + MI C ++ A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M K+ G++ + ++L GLC+ + +A+ + ++E P + + ++NG C
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GK +A+ L+ M G +P ++ V ++ ++G+ A+ LL++M + + + V
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ II GLC G + + +L + M G D Y+ L+ G+C G ++ ++ +M
Sbjct: 266 YSIIIDGLC-KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 464 VTKK 467
+ +K
Sbjct: 325 IKRK 328
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 1/224 (0%)
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A +M+ P + +N + + + + L +M G ++ T M
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ C K A + +M+ PD + ++NG C + EA+ L+ M G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KPT+ + N + L NG++ A++L+ +M + PN V+Y ++ +C + G+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS-GQTALAM 248
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L+ +M LD YS ++ G C++G+++N + +EM K
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
F D +++ L V K D AV R+++++ P V + + + K + + +
Sbjct: 49 FSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVL 108
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+L K+M ++G+ ++++ + + +L A + ++ ++ P+ V +NT++ GL
Sbjct: 109 ALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL 168
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
C+ + R+ + +LVDRM+ GH + L+ G C G V + + + MV
Sbjct: 169 CL-ECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ + ++IN FC+ K A S + ++ G +P FN + L + A+ L+
Sbjct: 123 IYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD 182
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M +M P ++ NT++ GLC+ G++ D L+DRM+ +G + Y +L C+
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCL-NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 451 GNVENVMQIAHEMVTKKGRLLKLK 474
G M++ +M + +L +K
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVK 265
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+SI +LK + I L+ + R V A+ + +I + +YN+++
Sbjct: 140 LSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---P 224
L + + A +FF +I ++ + P+V TYT ++ G C +A ++ M K P
Sbjct: 200 LCKTKRVNDAFDFFKEIERKG-IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N++ Y+ +++ F K G++ EAK+ EM+ P+ +TY++++ GLC++ R+DEA +
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMF 318
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G +V ++ +++ G C + + + R + + + + +Y +I GF +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G D+A +M G+ P ++++N + L +NGEL++A+++ + M + + + V+Y
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
T+I G+C G++++ L + G D Y+ ++ G C +G + V + +M
Sbjct: 439 TTVIRGMC-KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 148/277 (53%), Gaps = 13/277 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++LL V+ + A+E F ++V+ ++ PD+ TY++++ G C I+ A ++FD+
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLVNGLCLHDRIDEANQMFDL 320
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K ++++YNT+INGFCK +E+ K EM RG N +TYN +I G G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A+ ++M G ++ T+ +L GLC G+ ++A+ ++ + M+ D+ +Y
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI G CK GK +EA SL + +GLKP + ++ + L G L L +M Q
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+ N + ++ G + +L+ +M+ G+
Sbjct: 501 LMKNDCT---------LSDGDITLSAELIKKMLSCGY 528
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 155/298 (52%), Gaps = 5/298 (1%)
Query: 170 RVNSIKL--AEEFFHQIVKENVVPP--DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPN 225
R+ IKL A + F +VK P D + + I K ++ + K +V+ ++ +
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
L +N +IN FC ++ A + +M+ G P+ +T +++ G C RV +A L+
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
KM G+K ++ + +++ LC + + A + + + + P+V +Y ++NG C
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ +A LL +M + + P V +++A+ V+NG++ A L ++M +M P+ V+Y+
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+++ GLC+ R+ + + D M+ G D Y+ L+ G+C+ VE+ M++ EM
Sbjct: 300 SLVNGLCL-HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 144/274 (52%), Gaps = 4/274 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D+ T+ +I +C + A + M +P+ + +++NGFC++ + +A +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++M+ G +P+ + YNA+I LC RV++A ++ G + NV T+ +++ GLC
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
++ A L ++++ + P+V +Y +++ F K GK EA L +EM + P + ++
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+++ L + +D A + M CL + VSYNT+I G C AK R++D L M
Sbjct: 299 SSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK-RVEDGMKLFREMS 357
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G + Y+ L++G+ + G+V+ + +M
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L + + K+D + + + + D+ ++ +VIN FC + A+S+L +M G
Sbjct: 91 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 150
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+P + ++ + A+ L+ +M ++ P+ V+YN II LC K R+ D
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK-RVNDA 209
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D + R G + Y+ L+ G C + ++ +M+ KK
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 143/271 (52%), Gaps = 4/271 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
P V TYT ++ CK A V D M K PN++ YN +ING C++G +++AK+
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 244
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+N + + G +P+ ++Y ++ GLC R D+ K+L A+M N T +++ C
Sbjct: 245 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCR 304
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G ++A+ L+ + + P+ +VIN CK G+ D+A L M G P S
Sbjct: 305 GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTIS 364
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ V R L G + A LL +M + +C PN V++NT IC LC KG ++ L++ M
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQ-KGLIEQAIKLIELM 423
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
G ++ Y+ L+ G+C +G V++ +++
Sbjct: 424 PEYGCSVGIVTYNALVHGFCVQGRVDSALEL 454
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 157/308 (50%), Gaps = 36/308 (11%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
P++ TY +I G C+ G +++AK++ + ++ +P++++Y T++ G C ++ K
Sbjct: 220 PNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVL 279
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
EM+++ C PNE+T++ ++ C G V+ A ++ +M +G N + ++ +C
Sbjct: 280 FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICK 339
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G+ D A +L N+ NPD SY V+ G C+ G+ + A LL EM + P +
Sbjct: 340 QGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVT 399
Query: 369 FNAVFRILVENGELDRAILLLKQMPQ--------------------------------MD 396
FN IL + G +++AI L++ MP+ +
Sbjct: 400 FNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP 459
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C PN ++Y T++ GLC A+ R+ +L+ MI+ L+ ++ L+ +C++G VE
Sbjct: 460 CEPNTITYTTLLTGLCHAE-RLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEA 518
Query: 457 MQIAHEMV 464
M++ ++M+
Sbjct: 519 MELVNQMM 526
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 1/233 (0%)
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G E + + M+ RGC+P+ +TY ++ +C + EA ++ +MR G
Sbjct: 160 SGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCT 219
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
N+ T+ ++ G+C G+ D A L + PD+ SY V+ G C + D+ L
Sbjct: 220 PNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVL 279
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
EM + P +F+ + R G ++RAI +L+QM Q C PN N +I +C
Sbjct: 280 FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAIC- 338
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+GR+ D D ++ M G N D Y+ +L+G C G E+ ++ EMV K
Sbjct: 339 KQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRK 391
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 153/310 (49%), Gaps = 8/310 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SY ++L L R + A+E ++V++N PP+ T+ T I C+ G+IE A K+ ++
Sbjct: 364 SYTTVLRGLCRAGRWEHAKELLPEMVRKNC-PPNEVTFNTFICILCQKGLIEQAIKLIEL 422
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ YN +++GFC +G ++ A + N N C PN +TY ++ GLC R
Sbjct: 423 MPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN---NLPCEPNTITYTTLLTGLCHAER 479
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A L+A+M N T ++ C G ++A+ + +ME P++ ++
Sbjct: 480 LDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNT 539
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G K S+EA+ LL + ++G+ ++++V +L + AI +L + M
Sbjct: 540 LLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMG 599
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P YN I+ LC Q + D M+ +G + + Y L++G EG ++
Sbjct: 600 MRPKVGMYNKILFALCKRCETDQAI-DFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 658
Query: 457 MQIAHEMVTK 466
+ E+ K
Sbjct: 659 RYVLSELYAK 668
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 119/237 (50%), Gaps = 7/237 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + +G V +A+ F+ N +Y +LL L + A E ++++++
Sbjct: 438 LVHGFCVQGRVDSALELFNNLPCEPN---TITYTTLLTGLCHAERLDAAAELLAEMIQKD 494
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P + T+ ++ +C+ G +E A ++ + M PNL+ +NT+++G K EEA
Sbjct: 495 C-PLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 553
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ ++++G + +TY++++ L R +EA ++ ++ G + V + +L
Sbjct: 554 LELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 613
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
LC + DQA+ + ++ P+ +Y ++I G G EA +L E+ A+G+
Sbjct: 614 LCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 670
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M RG +P+V ++ + + ++ A+ +L +M C PN V+YN II G+C +G
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR-EG 236
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
R+ D +++++R+ G D Y+ +LKG C ++V + EMV KK
Sbjct: 237 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 287
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 223/514 (43%), Gaps = 97/514 (18%)
Query: 65 QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLL--------------------S 104
+ P A+ FF+WA + Y H Y + D+L+ S
Sbjct: 4 SSRPDLAIQFFDWAGEQD----GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCS 59
Query: 105 HSLISI------------AASLLKNSNKLSDFFISK-------LIKAYGDRGNVKAAIFW 145
+L++ A L+ L +F ++ LI GN A+
Sbjct: 60 PNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKL 119
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN-VVPPDVSTYTTMIR-G 203
F + +++YN+++ L + +++ A E ++++ PD+ TY T+I G
Sbjct: 120 FENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAG 179
Query: 204 YCKMGMIENAKKVFD-----------------------------------VMTVKPNLLA 228
CK G +E A ++ D M+ P+L+
Sbjct: 180 ICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVT 239
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
+NT+++GFCK G L A + + EM P+ +TY ++ GLC G+V A L+ ++
Sbjct: 240 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 299
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR---------NVMEANMNPDVKSYEVVIN 339
G+ +V + S++ GLC G+ ++A ++ ++ NM P + +Y +V+
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLG 359
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G K G +A+SL+ ++ ARG P V ++N + L + + A L +M + C P
Sbjct: 360 GLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFP 419
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
N V+ +++ GLC GR+ D LV M R H + +Y+ L+ G C+ +++ +
Sbjct: 420 NDVTLGSVVFGLCRV-GRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVV 478
Query: 460 AHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGG 493
M +G+ + L +F R L++ ++ GG
Sbjct: 479 LDAM---RGQGVALDDFAYRK----LIVSMIHGG 505
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 13/260 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y L+ L RV +++A +IV++ +P DV YT+++ G CK G IE A K+
Sbjct: 274 TYTILVNGLCRVGQVQVAFYLLEEIVRQGYIP-DVIAYTSLVDGLCKSGEIEEAHKLVKE 332
Query: 220 MTVK------------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
M+ + P L YN ++ G K G + +A +++++ RG P+ +TYN +
Sbjct: 333 MSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTL 392
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC RV EA L +M G N T S++ GLC VG+ D A + +
Sbjct: 393 IDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH 452
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P+V Y +I+G CK + D+A +L MR +G+ F++ + ++ G + A+
Sbjct: 453 APNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMA 512
Query: 388 LLKQMPQMDCLPNFVSYNTI 407
+ +M LP+ + T+
Sbjct: 513 MYDEMVARGFLPDGSTSKTL 532
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 169/346 (48%), Gaps = 40/346 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y L+ L + A + + +V++ P +V TY ++ G CK G++ +A K+ +
Sbjct: 175 TYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV-TYNVLLSGLCKEGLVIDAFKILRM 233
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM-NRGC-RPNELTYNAMIYGLCIN 274
M K +++ YNT++ G C KG+++EA K N M N C PN T+N +I GLC
Sbjct: 234 MIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE 293
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+ +A + KM G N+ T+ +L G GK +A+ + V++ P+ +Y
Sbjct: 294 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTY 353
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I+GFCK+ + A L EMR GL P +F +N + L + G L++A L ++M
Sbjct: 354 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 413
Query: 395 MDCLPNFVSYNTIICGLCMAK----------------------------------GRMQD 420
+C P+ +S+NT+I G A G + +
Sbjct: 414 ANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDE 473
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ ++RM+ SG D +Y LLKG +G+ ++ + H+M K
Sbjct: 474 AKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 519
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 148/267 (55%), Gaps = 4/267 (1%)
Query: 200 MIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
+++G C+ G + A + M +V P++++YNT+ING CK +L+EA + EM G
Sbjct: 4 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C PN +T ++ GLC +GR+DEA L+ M+ GF +V + +++ G C G D+
Sbjct: 64 CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
++ ++ +V +Y +++G C++G+ EA ++L M G+ P V ++ + L
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
++G A+ LL M + P+ V+YN ++ GLC +G + D ++ MI G D
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC-KEGLVIDAFKILRMMIEKGKKAD 242
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ L+KG C++G V+ +++ + M
Sbjct: 243 VVTYNTLMKGLCDKGKVDEALKLFNSM 269
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 153/283 (54%), Gaps = 8/283 (2%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
V PD+ +Y T+I G CK ++ A + M PN + T+++G CK G ++EA
Sbjct: 29 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 88
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + M +G + + Y +I G C NG +D K L +M G NV T+ ++ GL
Sbjct: 89 ELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 148
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C +G++ +A L + E ++PDV +Y +I+G CK G++ A+ LL M +G +P+
Sbjct: 149 CRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSN 208
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++N + L + G + A +L+ M + + V+YNT++ GLC KG++ + L +
Sbjct: 209 VTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLC-DKGKVDEALKLFN 267
Query: 427 RMIRSGHNLD---FTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M + + L+ FT ++ L+ G C+EG + ++I +MV K
Sbjct: 268 SMFDNENCLEPNVFT-FNMLIGGLCKEGRLTKAVKIHRKMVKK 309
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 144/272 (52%), Gaps = 6/272 (2%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKK 239
+ +K+ DV Y T+I G+C G ++ K++FD M + N++ Y+ +++G C+
Sbjct: 92 EAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRL 151
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G+ +EA +N M G P+ +TY +I GLC +GR A L+ M G + + T+
Sbjct: 152 GQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY 211
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM-- 357
+L GLC G A LR ++E DV +Y ++ G C GK DEA+ L M
Sbjct: 212 NVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFD 271
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
L+P VF+FN + L + G L +A+ + ++M + N V+YN ++ G C+ G+
Sbjct: 272 NENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGG-CLKAGK 330
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+++ +L +++ G + YS L+ G+C+
Sbjct: 331 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 362
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 166/310 (53%), Gaps = 11/310 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ ++ +E F +++ + + +V TY+ ++ G C++G + A V + M
Sbjct: 106 YGTLISGFCNNGNLDRGKELFDEMLGKGI-SANVVTYSCLVHGLCRLGQWKEANTVLNAM 164
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ Y +I+G CK G A +N M+ +G P+ +TYN ++ GLC G V
Sbjct: 165 AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 224
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN---PDVKSY 334
+A ++ M G K +V T+ +++KGLC GK D+A+ L N M N N P+V ++
Sbjct: 225 IDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL-KLFNSMFDNENCLEPNVFTF 283
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I G CK G+ +A+ + ++M +G + ++N + ++ G++ A+ L KQ+
Sbjct: 284 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 343
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDV-EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ +PN +Y+ +I G C K RM ++ + L M G N Y+ L+ C+EG++
Sbjct: 344 LGFVPNSFTYSILIDGFC--KMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 401
Query: 454 ENVMQIAHEM 463
E + EM
Sbjct: 402 EQAKSLFQEM 411
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 189/423 (44%), Gaps = 13/423 (3%)
Query: 49 FSLCLGSNIVTKVIYEQTNPYHALFFFNW-ASNPNPNPNKYHHTTP---CYTAITDVLLS 104
F LG I V+ + W +N N H P YT + D L
Sbjct: 126 FDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCK 185
Query: 105 HSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS 160
+ A LL + + S+ + L+ G V A + A + +
Sbjct: 186 DGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVT 245
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVK-ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
YN+L+ L + A + F+ + EN + P+V T+ +I G CK G + A K+
Sbjct: 246 YNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRK 305
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K NL+ YN ++ G K G+++EA + ++++ G PN TY+ +I G C
Sbjct: 306 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 365
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ AK L +MR +G + + +++ LC G +QA + + AN PD+ S+
Sbjct: 366 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 425
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G K G L +M GL+P +F+ + L + GELD A L++M
Sbjct: 426 MIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 485
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ + Y++++ GL +KG ++ +L+ +M G LD + S +L C +V
Sbjct: 486 FTPDALVYDSLLKGLS-SKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDV 544
Query: 457 MQI 459
M++
Sbjct: 545 MEL 547
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 117/237 (49%), Gaps = 1/237 (0%)
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N ++ G C+ G + EA + EM + P+ ++YN +I GLC ++ EA L+ +M
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G N T +++ GLC G+ D+A+ L + + + DV Y +I+GFC G D
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
L EM +G+ V +++ + L G+ A +L M + P+ V+Y +I
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GLC GR DL++ M+ G Y+ LL G C+EG V + +I M+ K
Sbjct: 182 GLC-KDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 237
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 216/431 (50%), Gaps = 31/431 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL- 115
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSAKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 116 ---KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
K + + +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DIPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAY 229
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++ Y
Sbjct: 130 RYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTY 188
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
NT+ING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 189 NTIINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG 248
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKSD 348
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ C G D
Sbjct: 249 FGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLD 308
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNFV 402
A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 309 AAADVLKAM----IRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQST 364
Query: 403 ------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 365 LHLEPSAYNPMIEYLC-NNGQAAKAEALVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSA 422
Query: 457 MQIAHEMVTKK 467
++ M+ +K
Sbjct: 423 FELLKIMLRRK 433
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 150/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVSSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + ++ + L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCI--LLDIPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
C GN++ + M+
Sbjct: 301 QCNSGNLDAAADVLKAMI 318
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AY++++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 201/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L + ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++D+A +L +M G N
Sbjct: 182 IKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GL P ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 150/300 (50%), Gaps = 39/300 (13%)
Query: 143 IFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP--------- 191
+ W + +E G A LY +N L+ V+ I+LA+ F I K ++ P
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLM 178
Query: 192 -------------------------PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
PDV TY+ +I G CK +++A +FD M K
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLV 238
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN + + T+I+G CK G ++ A + +M+++ P+ +TYN +IYGLC G + +A+ L
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +M + G + T+ +++ G C G + A Y + +++ N+ D +Y +I+G C+
Sbjct: 299 IDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQ 358
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+S +A +L+EM GLKP + ++ + + G++ LLK+M + +P+ V+
Sbjct: 359 EGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 176/342 (51%), Gaps = 6/342 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+KLIK + N+ A+ ++ +++YN+L+ ++N I A ++
Sbjct: 128 TKLIKGFFTLRNIPKAVRVMEILEKFGQPD-VFAYNALINGFCKMNRIDDATRVLDRMRS 186
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
++ PD TY MI C G ++ A KV + + +P ++ Y +I +G ++
Sbjct: 187 KDF-SPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVD 245
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA K M+EM++RG +P+ TYN +I G+C G VD A ++ + L G + +V ++ +L
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILL 305
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+ L GK+++ + + +P+V +Y ++I C+ GK +EA++LLK M+ +GL
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +S++ + G LD AI L+ M CLP+ V+YNT++ LC G+ +
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC-KNGKADQALE 424
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ ++ G + + + Y+ + G+ + + EM++
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS 466
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 161/295 (54%), Gaps = 9/295 (3%)
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAY 229
++KL +E + +K PD+ TY T+IRG CK GM++ A ++ + +K P++++Y
Sbjct: 247 ALKLMDEMLSRGLK-----PDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISY 301
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N ++ +G+ EE +K M +M + C PN +TY+ +I LC +G+++EA L+ M+
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G + ++ ++ C G+ D A+ +L ++ PD+ +Y V+ CK GK+D+
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A+ + ++ G P S+N +F L +G+ RA+ ++ +M P+ ++YN++I
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
LC +G + + +L+ M + Y+ +L G+C+ +E+ + + MV
Sbjct: 482 CLC-REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 150/276 (54%), Gaps = 3/276 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTV--KPNLLAYNTMINGFCKKGELEEAKKCM 249
PDV T +I+G+ + I A +V +++ +P++ AYN +INGFCK +++A + +
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVL 181
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+ M ++ P+ +TYN MI LC G++D A ++ ++ + + V T+ +++ +
Sbjct: 182 DRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLE 241
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G D+A+ + ++ + PD+ +Y +I G CK G D A +++ + +G +P V S+
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISY 301
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + R L+ G+ + L+ +M C PN V+Y+ +I LC G++++ +L+ M
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC-RDGKIEEAMNLLKLMK 360
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
G D Y L+ +C EG ++ ++ M++
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 142/274 (51%), Gaps = 5/274 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL L+ + E+ ++ E P+V TY+ +I C+ G IE A + +
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKC-DPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+ +Y+ +I FC++G L+ A + + M++ GC P+ + YN ++ LC NG+
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D+A + K+ G N S++ +M L G +A+ + +M ++PD +Y
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ C+ G DEA LL +MR+ P+V ++N V + ++ AI +L+ M
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
C PN +Y +I G+ A R + +E L + ++R
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAME-LANDLVR 571
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 4/245 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+ L+ L R I+ A +++KE + PD +Y +I +C+ G ++ A + +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLL-KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P+++ YNT++ CK G+ ++A + ++ GC PN +YN M L +G
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
A ++ +M NG + T+ SM+ LC G D+A L ++ +P V +Y +
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
V+ GFCK + ++AI++L+ M G +P ++ + + G A+ L + ++D
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573
Query: 397 CLPNF 401
+ +
Sbjct: 574 AISEY 578
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 11/225 (4%)
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +G E+ L+ M G+ +V ++KG + +AV + ++E PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDV 158
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +INGFCK+ + D+A +L MR++ P ++N + L G+LD A+ +L Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ +C P ++Y TI+ M +G + + L+D M+ G D Y+ +++G C+EG
Sbjct: 219 LLSDNCQPTVITY-TILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 452 NVENVMQIAHEMVTKKGRLLKLKNFLTRVVDA-LLLMWIVTGGSW 495
V+ A EMV R L+LK V+ +LL ++ G W
Sbjct: 278 MVDR----AFEMV----RNLELKGSEPDVISYNILLRALLNQGKW 314
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 191/412 (46%), Gaps = 44/412 (10%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ + D+ + A S L KLS + + LI + G++ AA + +
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMI 464
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +Y SL+G I A +H++ + + P + T+TT++ G + G+I
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS-IYTFTTLLSGLFRAGLI 523
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+A K+F+ M VKPN + YN MI G+C++G++ +A + + EM +G P+ +Y +
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I+GLC+ G+ EAK+ + + + N + +L G C GK ++A+ + +++ +
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ D+ Y V+I+G K LLKEM RGLKP + ++ + G+ A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM---------IRSGHNLDF- 437
+ M C+PN V+Y +I GLC A G + + E L +M + G LD
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKA-GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL 762
Query: 438 -------------------------TMYSCLLKGYCEEGNVENVMQIAHEMV 464
Y+ L++G+C +G +E ++ M+
Sbjct: 763 TKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 166/346 (47%), Gaps = 42/346 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
+Y +L+ L +V ++ E +++ P + + ++++ G K G IE A K+
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV-SSLVEGLRKRGKIEEALNLVKR 357
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
V D V PNL YN +I+ CK + EA+ + M G RPN++TY+ +I C G
Sbjct: 358 VVD-FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++D A + +M G K +V + S++ G C G A G++ ++ + P V +Y
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF----NAVFRI---------------- 375
++ G+C GK ++A+ L EM +G+ P++++F + +FR
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 376 ---------------LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
E G++ +A LK+M + +P+ SY +I GLC+ G+ +
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT-GQASE 595
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ VD + + L+ Y+ LL G+C EG +E + + EMV +
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 42/343 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I+ Y + G++ A + + + YSY L+ L A+ F + K N
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------------------- 221
++ YT ++ G+C+ G +E A V M
Sbjct: 608 CELNEIC-YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLF 666
Query: 222 -----------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+KP+ + Y +MI+ K G+ +EA + M+N GC PNE+TY A+I G
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD-QAVGYLRNVMEANMNP 329
LC G V+EA++L +KM+ N T+ L L G+ D Q L N + +
Sbjct: 727 LCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGEVDMQKAVELHNAILKGLLA 785
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+ +Y ++I GFC+ G+ +EA L+ M G+ P ++ + L ++ +AI L
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
M + P+ V+YNT+I G C+A G M +L + M+R G
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVA-GEMGKATELRNEMLRQG 887
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 175/415 (42%), Gaps = 79/415 (19%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+ Y +G + A+ +H+ +Y++ +LL L R I+ A + F+++ +
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
NV P V TY MI GYC+ G + A + MT K P+ +Y +I+G C G+
Sbjct: 536 WNVKPNRV-TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA----------------------- 280
EAK ++ + C NE+ Y +++G C G+++EA
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 281 ---------KM---LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
K+ L+ +M G K + + SM+ G F +A G ++
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD--RAI 386
P+ +Y VING CK G +EA L +M+ P ++ IL + GE+D +A+
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAV 773
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC---- 442
L + + L N +YN +I G C +GR+++ +L+ RMI G + D Y+
Sbjct: 774 ELHNAILK-GLLANTATYNMLIRGFC-RQGRIEEASELITRMIGDGVSPDCITYTTMINE 831
Query: 443 -------------------------------LLKGYCEEGNVENVMQIAHEMVTK 466
L+ G C G + ++ +EM+ +
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 145/290 (50%), Gaps = 4/290 (1%)
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
F ++ + + P+V T + ++ G K A ++F+ M ++P++ Y +I C
Sbjct: 179 FKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLC 238
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+ +L AK+ + M GC N + YN +I GLC +V EA + + K +V
Sbjct: 239 ELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ GLC V +F+ + + ++ +P + ++ G K GK +EA++L+K +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
G+ P +F +NA+ L + + A LL +M ++ PN V+Y+ +I C +G+
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFC-RRGK 417
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ + M+ +G L Y+ L+ G+C+ G++ EM+ KK
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 159/342 (46%), Gaps = 40/342 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+ ++LL LV+ LA E F+ +V + PDV YT +IR C++ + AK++
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGI-RPDVYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI--- 273
M N++ YN +I+G CKK ++ EA ++ + +P+ +TY ++YGLC
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 274 --------------------------------NGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
G+++EA L+ ++ G N+ + +
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ LC KF +A + + + P+ +Y ++I+ FC+ GK D A+S L EM G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
LK +V+ +N++ + G++ A + +M P V+Y +++ G C +KG++
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC-SKGKINKA 491
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L M G ++ LL G G + + +++ +EM
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y S++ + K A + ++ E VP +V TYT +I G CK G + A+ + M
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV-TYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKC-MNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ PN + Y ++ KGE++ K ++ + +G N TYN +I G C GR
Sbjct: 744 QPVSSVPNQVTYGCFLD-ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EA L+ +M +G + T+ +M+ LC +A+ ++ E + PD +Y
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKP 364
+I+G C G+ +A L EM +GL P
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 160 SYNSLLGVLVRVN-SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+Y L +L + ++ A E + I+K + + +TY +IRG+C+ G IE A ++
Sbjct: 754 TYGCFLDILTKGEVDMQKAVELHNAILKG--LLANTATYNMLIRGFCRQGRIEEASELIT 811
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M V P+ + Y TMIN C++ ++++A + N M +G RP+ + YN +I+G C+ G
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ +A L +M G N T ++
Sbjct: 872 EMGKATELRNEMLRQGLIPNNKTSRT 897
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 176/343 (51%), Gaps = 5/343 (1%)
Query: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL 164
H +S+ + + K + + LI + G +K A+ F++ + ++ L
Sbjct: 138 HFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTIL 197
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK- 223
+ VL + + A F + + E V P++ TY ++ GYC + +A KVF++M K
Sbjct: 198 VDVLCKKGMVSEARCVF-ETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKG 256
Query: 224 --PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
P++ +Y+ +ING+CK ++EAK + +M + PN +TYN ++ GLC + EA+
Sbjct: 257 CAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQ 316
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L KM +G N+ T+ +L GLC G ++A+ L ++ E + PD+ Y ++I G
Sbjct: 317 ELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGM 376
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
GK + A L ++ A G++P+V ++N + + L++ G D A L ++M LP+
Sbjct: 377 FIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDS 436
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
SYN II G + ++ L+D M+ + D + + LL
Sbjct: 437 CSYNVIIQGFLQNQDPSTAIQ-LIDEMVGRRFSADSSTFKMLL 478
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
D+ V N N +IN C+ + A +++M G +P+ +T+ +I GLC GR+
Sbjct: 113 DLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRI 172
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L +M N T ++ LC G +A + E + P++ +Y +
Sbjct: 173 KEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNAL 232
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+NG+C + ++A + + M +G P+V S++ + ++ +D A LL QM + +
Sbjct: 233 MNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKEL 292
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+PN V+YNT++ GLC A ++ ++L +M SG + YS LL G C+ G++E +
Sbjct: 293 IPNTVTYNTLMQGLCHASSLLE-AQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEAL 351
Query: 458 QIAHEMVTKK 467
++ M +K
Sbjct: 352 KLLTSMQERK 361
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 224/514 (43%), Gaps = 67/514 (13%)
Query: 4 PRRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLD---QFSLCLGSNIVTK 60
PRR + I + P S+ ++ +R + + SS L +++ L +V
Sbjct: 3 PRRRIIVIDRPPSASLQSNRALTLEERRDVRQLLQIVESSSRLGFSMKWNGQLSQRLVGV 62
Query: 61 VIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---- 116
+++ N A+ FF WA + HT Y + L+ A L K
Sbjct: 63 ILHMVKNGESAMVFFGWAGTRQ----DFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWP 118
Query: 117 ------------------NSNKLS---------------------DFFISKLIKAYGDRG 137
N KL F ++ L K+ G
Sbjct: 119 QELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKS----G 174
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
N++ A+ +F + I C ++ L+ L R + A +F ++ ++ P+ TY
Sbjct: 175 NLELALRYFEKMSSI---PCAATWTILIDGLFRAIRVDEACYYFEEM--KHTAIPNNWTY 229
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
T +I G K G + A++V M V P L Y ++I G CK G++ +A + +M +G
Sbjct: 230 TVVINGLVKAGKVAEAERVLQEMPV-PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGY 288
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA-- 315
+ + LTYN +I+G C +D A L+ +M+ N F ++ T+ ++ GLC + +A
Sbjct: 289 QGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARD 348
Query: 316 -VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
+G LRN E + P+V SY +I+GF K + ++A L EM G P V +++ + R
Sbjct: 349 LLGTLRN--EDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIR 406
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L G A L++M LP Y+++I GLC A G + + D M+ +G
Sbjct: 407 GLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRA-GELDAASTVFDSMVANGCQ 465
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ +Y+ L+ G C+ G + + EM T++G
Sbjct: 466 PNLAVYNSLIYGLCKTGRLCDAKLRVKEM-TERG 498
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 146/290 (50%), Gaps = 10/290 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y S++G + + A + K D TY T+I G+C++ I+ A ++
Sbjct: 257 LANYTSVIGGHCKAGDMGKAYHLLEDM-KRKGYQGDNLTYNTLIHGHCRLQEIDRAYELL 315
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLCI 273
+ M P++ Y+ +I G C+ L EA+ + + N C PN ++YN +I G
Sbjct: 316 EEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSK 375
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
RV++A L +M G +V T+ ++++GLC G+ +A YL ++ + P V
Sbjct: 376 AARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPV 435
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y VI+G C+ G+ D A ++ M A G +P + +N++ L + G L A L +K+M
Sbjct: 436 YSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMT 495
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS-GHNLDFTMYSC 442
+ C P+ V+Y T+I GLC R ++ D +RS ++ + SC
Sbjct: 496 ERGCSPDGVTYGTLIVGLC----RWSRTDEACDLYVRSLEQGIEISETSC 541
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 147/310 (47%), Gaps = 7/310 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y+ L+ L R + A + + E+ P+V +Y T+I G+ K + +A ++F
Sbjct: 327 IFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLF 386
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M P+++ Y+T+I G C G EA + EM+ + P Y+++I GLC
Sbjct: 387 LEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRA 446
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D A + M NG + N++ + S++ GLC G+ A ++ + E +PD +Y
Sbjct: 447 GELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTY 506
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G C+ ++DEA L +G++ + S N V L L++A +L+ +
Sbjct: 507 GTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASL---RCLEQAQRVLRVVLA 563
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P Y T+I LC + + + L++ MI +G D + L+ C +
Sbjct: 564 TGNSPTAFFYATVIESLC-KENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAV 622
Query: 455 NVMQIAHEMV 464
M EMV
Sbjct: 623 VAMAFLEEMV 632
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 11/310 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ R+ I A E ++ K N PD+ TY +I G C+ + A+ +
Sbjct: 294 TYNTLIHGHCRLQEIDRAYELLEEM-KSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGT 352
Query: 220 M----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ PN+++YNT+I+GF K + +A + EM+ G P+ +TY+ +I GLC G
Sbjct: 353 LRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAG 412
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R EA + +M V + S++ GLC G+ D A +++ P++ Y
Sbjct: 413 RASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYN 472
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I G CK G+ +A +KEM RG P ++ + L D A L + +
Sbjct: 473 SLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQ 532
Query: 396 DCLPNFVSYNTIICGL-CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ S N +I L C ++ + ++ ++ +G++ Y+ +++ C+E N+
Sbjct: 533 GIEISETSCNVVIASLRC-----LEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLA 587
Query: 455 NVMQIAHEMV 464
Q+ +M+
Sbjct: 588 EARQLLEDMI 597
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 149/339 (43%), Gaps = 38/339 (11%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y+S++ L R + A F +V N P+++ Y ++I G CK G + +AK M
Sbjct: 436 YSSVISGLCRAGELDAASTVFDSMVA-NGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEM 494
Query: 221 TVK---PNLLAYNTMINGFCKKGE--------------------------------LEEA 245
T + P+ + Y T+I G C+ LE+A
Sbjct: 495 TERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQA 554
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ + ++ G P Y +I LC + EA+ L+ M G K + ST +++
Sbjct: 555 QRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGA 614
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR-GLKP 364
+C K A+ +L ++ P V +Y ++N K GK EA +L+ + + P
Sbjct: 615 MCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFP 674
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ + +++ A +L+++ + + V+YNT++ GL + +Q V +L
Sbjct: 675 DELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRN-LQMVYEL 733
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ M R+ ++ ++ L++G+C G + +++ EM
Sbjct: 734 LREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM 772
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 113/236 (47%), Gaps = 12/236 (5%)
Query: 154 NGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
N + Y +++ L + N++ A + ++ + PD ST ++ C+ A
Sbjct: 566 NSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGI-KPDGSTVDALVGAMCRQDKAVVA 624
Query: 214 KKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR-GCRPNELTYNAMIY 269
+ M KP++ Y+T++N K G+ EA + +++ C P+EL Y +I
Sbjct: 625 MAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIA 684
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
+V+EA+ ++ +++ ++ + ++LKGL LR +
Sbjct: 685 AYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVV 744
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ ++ ++I GFC++G++D A+ +L EM+ + L P+ A+ + LV+ EL RA
Sbjct: 745 NEATFNILIQGFCRLGQTDRAVRVLSEMK-KVLTPSA----AIIKFLVD--ELARA 793
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 143/343 (41%), Gaps = 74/343 (21%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK----------- 206
L YNSL+ L + + A+ ++ E PD TY T+I G C+
Sbjct: 468 LAVYNSLIYGLCKTGRLCDAKLRVKEMT-ERGCSPDGVTYGTLIVGLCRWSRTDEACDLY 526
Query: 207 ---------------------MGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGEL 242
+ +E A++V V+ P Y T+I CK+ L
Sbjct: 527 VRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNL 586
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA++ + +M+ G +P+ T +A++ +C + A + +M G K +V T+ ++
Sbjct: 587 AEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTL 646
Query: 303 LKGLCVVGKFDQAVGYLRNVM-EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
L L GK +A LR ++ + PD Y +I + + +EA ++L+E++++
Sbjct: 647 LNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKW 706
Query: 362 LKPTVFSFN-------------------------------AVFRILVEN----GELDRAI 386
++ ++N A F IL++ G+ DRA+
Sbjct: 707 GIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAV 766
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+L +M ++ P+ ++ L A+ R Q+ +DLV R +
Sbjct: 767 RVLSEMKKV-LTPSAAIIKFLVDELARAE-REQESKDLVKRPV 807
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
+ + LI AY ++ V+ A + K + +YN+LL L R ++++ E
Sbjct: 676 ELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLR 735
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM--TVKPNLLAYNTMINGFCKKG 240
++ K N + +T+ +I+G+C++G + A +V M + P+ +++ +
Sbjct: 736 EM-KRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKKVLTPSAAIIKFLVDELARAE 794
Query: 241 ELEEAK 246
+E+K
Sbjct: 795 REQESK 800
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHGSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ SY++L V++R
Sbjct: 70 DMPKKGLEWDEDMWVL-MIDSYGKAGIVQESVKLFQKMEELGVERTTKSYDTLFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + FD M + P+++
Sbjct: 129 GRFMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSREISPDVIT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + +++EA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +++ + P D + +I+G CK G
Sbjct: 248 GYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLISGQCKTGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN + D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGVLIENFCKADQHDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHMEPSAYNPMIEYLC-NNGQTAKAEALVRQLLKLGVQ-DPTALNTLVRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T++RG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQTAKAEALVRQLLKLGVQDP--TALNTLVRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AY++++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYDSLVQSYLKKNEPADAKXALDSMIENDHLPDSSLFRSVMESL 483
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 173/330 (52%), Gaps = 24/330 (7%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLA----YNTMINGFCKKGELEEAKKC 248
D TY ++R +C G ++ A + M +P + YN ++ CK G++ EA +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M + C+P+ +T+N +I GLC GR+DEA+ ++ +M +GF N+ T+ +++ GL
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR-GLKPTVF 367
G+ +AV ++ + PD ++Y +I+GFCK G+ D A L+EM+ R G P F
Sbjct: 137 AGRSGEAVLVMQGM---TTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193
Query: 368 SFNAVFRILVENGELDRAILLLKQM-PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+++ + L ++ L +A LL++M + DC + V++NT++ G C A+ + +L+
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQD-LDRARELLS 252
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLL 486
M+ G D YS ++ G C G+V+ + +MV++ + D +
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCK-----------PDVVTY 301
Query: 487 MWIVTGGSWISRFVFVHQVVVIMERTVEDG 516
+VTG + V + +++R +EDG
Sbjct: 302 TVLVTGLCKAGKMV---EACRLVKRMLEDG 328
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 168/329 (51%), Gaps = 18/329 (5%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEE 179
+FF+ L K+ G V A+ K +++GAC + ++N+L+ L + + A++
Sbjct: 58 NFFVHALCKS----GKVPEAM---EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQ 110
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKK 239
++ + ++ TY T+I G G A V MT P+ YN +I+GFCK
Sbjct: 111 VLDEMERSGFAA-NLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKS 169
Query: 240 GELEEAKKCMNEMMNR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD---N 295
GE++ A + EM R GC P+ TY+ +I GLC + + +A L+ +M G KD +
Sbjct: 170 GEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMI--GRKDCCAS 227
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V +++ G C D+A L +++E PDV +Y +I+G C+ G D+ +LL+
Sbjct: 228 VVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLE 287
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+M +RG KP V ++ + L + G++ A L+K+M + C PN V+Y+ + GLC
Sbjct: 288 KMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKID 347
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
++ DL+ + G D + LL
Sbjct: 348 -KLDMANDLLTSIRDKGRITDVVAFEALL 375
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 180/367 (49%), Gaps = 23/367 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYS-YNSLLGVLVRVNSIKLAEEFFHQIVKE 187
L++A+ G ++AA+ + +Q A S YN + L + + A E + K+
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM-KD 82
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEE 244
PDV T+ T+I G CK G ++ A++V D M NL+ YNT+ING G E
Sbjct: 83 GACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGE 142
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN-GFKDNVSTHKSML 303
A M M P+ TYNA+I+G C +G +D A + +M+ G + T+ ++
Sbjct: 143 AVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILI 199
Query: 304 KGLCVVGKFDQAVGYLRNVM-EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
GLC +A L+ ++ + V ++ +++G+CK D A LL M G
Sbjct: 200 NGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGC 259
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P V +++ + L G++D+ LL++M C P+ V+Y ++ GLC A G+M +
Sbjct: 260 APDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA-GKMVEAC 318
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK---KGRLLKLKNFLTR 479
LV RM+ G + YS + G C+ + + +A++++T KGR+ + F
Sbjct: 319 RLVKRMLEDGCTPNAVTYSLVFDGLCK----IDKLDMANDLLTSIRDKGRITDVVAF--- 371
Query: 480 VVDALLL 486
+ALLL
Sbjct: 372 --EALLL 376
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 126/230 (54%), Gaps = 5/230 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ + I A F ++ + PD TY+ +I G CK + A ++
Sbjct: 158 TYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQE 217
Query: 220 MTVKPN----LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + + ++A+NT+++G+CK +L+ A++ ++ M+ GC P+ +TY+ +I GLC G
Sbjct: 218 MIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCG 277
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
VD+ L+ KM G K +V T+ ++ GLC GK +A ++ ++E P+ +Y
Sbjct: 278 DVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYS 337
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+V +G CKI K D A LL +R +G V +F A+ + V+ LDRA
Sbjct: 338 LVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL-LSVKKRLLDRA 386
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 178/375 (47%), Gaps = 38/375 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A+ K + +YN+L+ ++ + A++ +I N
Sbjct: 23 LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+ P+V TYTT+I YCK +E+A ++D MTVK P+++ Y ++NG CK G++EEA
Sbjct: 83 L-EPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K EM G PN +Y +I L G V EA +L +M + G +V + +++ G
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L G + A + ++E ++ P+ +Y +I+G CK+G ++ LL+EM + + P
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA----------- 414
V ++++ + G L+ A+ ++++M Q + LPN Y T+I G A
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321
Query: 415 -----------------------KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
GRM++ ++L M+ G D Y+ ++ G+ + G
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381
Query: 452 NVENVMQIAHEMVTK 466
+ IA EM K
Sbjct: 382 KESDAFNIAQEMTEK 396
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 166/376 (44%), Gaps = 74/376 (19%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ + ++ A + ++ +++VP DV TYT ++ G CK G +E AK VF
Sbjct: 89 TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVP-DVVTYTCIMNGLCKSGKVEEAKSVFRE 147
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR------------------ 258
M V PN +Y T+I+ K+G + EA M+ RG
Sbjct: 148 MEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGM 207
Query: 259 -----------------PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
PN +TY+A+I G C G V++ ++L+ +M NV + S
Sbjct: 208 ANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS 267
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G G ++A+ +R +++ N+ P+V Y +I+G+ K + A+ L KEM++RG
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+ F ++ L +G ++ A L K M LP+ V+Y +++ G A G+ D
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA-GKESDA 386
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKG----------------------------------Y 447
++ M D Y+ L+ G Y
Sbjct: 387 FNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAY 446
Query: 448 CEEGNVENVMQIAHEM 463
C+EGN+ N +++ +EM
Sbjct: 447 CKEGNLGNALKLLNEM 462
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 119/238 (50%), Gaps = 1/238 (0%)
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
+N +I+G+C+ GE+ A + + M G P+ +TYN ++ G C G + AK LM ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
L + NV T+ +++ C + A+ + ++ PDV +Y ++NG CK GK +
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
EA S+ +EM G+ P FS+ + L + G + A +L +M + V Y ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GL A G + ED+ ++ + YS L+ G+C+ G+V + EM K
Sbjct: 200 DGLFKA-GMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 188/415 (45%), Gaps = 47/415 (11%)
Query: 95 YTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAY--GDRGNVKAAIFWFHQ 148
Y++I D L++ A +++ N L + F+ LI Y D+ + +F +
Sbjct: 265 YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMK 324
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
++ +E + +S + L R ++ A+E F ++ ++P V+ YT+M+ G+ K G
Sbjct: 325 SRGLEENN--FVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN-YTSMMDGFFKAG 381
Query: 209 MIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+A + MT K +++AYN +ING K G+ E ++ M G P+ T+N
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFN 440
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
MI C G + A L+ +M+ G K N T +++ LC G+ ++ + L +++
Sbjct: 441 TMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM 500
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+P +++ V++ K ++D + ++ G+K + ++N + G + RA
Sbjct: 501 GFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRA 560
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCM-------------------------------- 413
L+ K M L + ++YN +I G C+
Sbjct: 561 TLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620
Query: 414 --AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
A +++ LV++M G + T Y L+ G+ + GN++ +++ EM+TK
Sbjct: 621 LSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK 675
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 102/191 (53%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M VK +L YNT+I+ FC+ G + A +MM +G + +TYNA+I+G CI+ + +
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A + ++M G NV T+ +L GL +A G + + E + P+ +Y+++++
Sbjct: 595 AFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G KIG E + L EM +G P ++N + + ++ +A L+++M P
Sbjct: 655 GHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPP 714
Query: 400 NFVSYNTIICG 410
N +Y+ +ICG
Sbjct: 715 NSSTYDILICG 725
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 154/360 (42%), Gaps = 43/360 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ ++ + G A + + +G + +YN L+ L ++ K E FH ++
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG--KYESESFHTGMR 428
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + PD +T+ TMI YCK G + NA K+ + M +KPN + N ++ C GE+E
Sbjct: 429 QLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE 488
Query: 244 EAKKCMNEMMNRGCRPNELT-----------------------------------YNAMI 268
+ +N+M+ G P T YN +I
Sbjct: 489 KTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLI 548
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
C G + A ++ M G ++ T+ +++ G C+ +A ++ ++
Sbjct: 549 STFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVS 608
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P+V++Y +++ G EA L+ +M+ RGL P +++ + + G + + L
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKG-RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+M +P +YN +I C AKG +M ++L+ M G + + Y L+ G+
Sbjct: 669 YCEMITKGFVPKTRTYNVLIS--CFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
+L + V+ + V+I+G+C+ G+ A+ LL+ M+ G P + ++N +
Sbjct: 4 HLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFC 63
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G+L A L+ ++ ++ PN ++Y T+I C ++ ++D + D M D
Sbjct: 64 KIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQC-LEDALYMYDEMTVKSLVPDV 122
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+C++ G C+ G VE + EM
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREM 148
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 180/383 (46%), Gaps = 64/383 (16%)
Query: 145 WFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
W + K ++ +++YN L L + N+ +LA E F Q+ + PPD TY+ ++RG
Sbjct: 27 WLGRQKGYQHS--VFTYNCFLDALAKANAGQLAYEKFQQMQRRGY-PPDDFTYSIVLRGL 83
Query: 205 CKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM-MNRGCRPN 260
CK G ++ AK++ + VK N++ Y+ +I+G CK +++A + M GC P+
Sbjct: 84 CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPD 143
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+T+N+++ GLC R+ EA +L M G + NV ++ ++L GLC G+ D+A
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
++E + PD+ +Y + G CK + EA ++M +G K +F+ V IL + G
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263
Query: 381 ELDRA----------------------------------------------------ILL 388
+ A +LL
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323
Query: 389 LKQMPQMD---CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
++M M C PN +YN ++ LC AK ++ + ++LV+ M G + D YS L+
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAK-QLDEAQELVNEMANYGLSPDVVTYSALVD 382
Query: 446 GYCEEGNVENVMQIAHEMVTKKG 468
G C+ G ++ + EM +K+G
Sbjct: 383 GLCKLGKLDRACDLLEEM-SKEG 404
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 158/312 (50%), Gaps = 13/312 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+ N ++ L R + A + F +++ N PP + T+I CK + + +F
Sbjct: 268 AQNQMIEHLCRSGMLDEACKTFEEMISRNH-PPSAELFNTLIHAVCKSKRLPDGVLLFQR 326
Query: 220 MT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
M PNL YN M++ CK +L+EA++ +NEM N G P+ +TY+A++ GLC
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G++D A L+ +M G + T S+L L GK D A+ +L + PD+ +
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +++G CK G+ DEAI+ L +M A P VFS+ + L +G+ A + ++M
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMV 506
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG-HNLDFTMYSCLLKGYCEEGN 452
+ LP+ V Y++++ GL +EDL ++++ DF M+ ++ G C+ G
Sbjct: 507 KRGVLPDTVLYHSLLDGL-----ARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGK 561
Query: 453 VENVMQIAHEMV 464
E+ ++ M
Sbjct: 562 AEDACEVVERMA 573
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 139/307 (45%), Gaps = 45/307 (14%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI A + + F + K ++ C L +YN ++ L + + A+E +++
Sbjct: 307 LIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMA 366
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---------------------- 223
+ PDV TY+ ++ G CK+G ++ A + + M+ +
Sbjct: 367 NYGL-SPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKV 425
Query: 224 ----------------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
P+L+ YNT+++G CK G ++EA + +M+ C P+ +Y +
Sbjct: 426 DYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTII 485
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I LC +G+ A + +M G + + S+L GL G D A+ L+ +
Sbjct: 486 ITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---C 542
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD +++V++G CK GK+++A +++ M G F++ V R L + G++D+A
Sbjct: 543 KPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQ 602
Query: 388 LLKQMPQ 394
L+ +
Sbjct: 603 LVDDASE 609
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 118/253 (46%), Gaps = 11/253 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLS----DFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+A+ D L + A LL+ +K F + ++ A G V A+ K
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ L +YN+LL L + I A F ++V P DV +YT +I C+ G
Sbjct: 437 ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTP-DVFSYTIIITALCRSGQA 495
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A +F M V P+ + Y+++++G + G + A + + + C+P+ + + +
Sbjct: 496 AGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMV 552
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ GLC G+ ++A ++ +M GF + T+ ++++GL +GK D+A + + E +
Sbjct: 553 VDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETHT 612
Query: 328 NPDVKSYEVVING 340
+ + S E G
Sbjct: 613 SVERLSMEKAEAG 625
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 188/391 (48%), Gaps = 9/391 (2%)
Query: 78 ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRG 137
+S PN Y C+ + L H + +LK +++ IS+L+K D
Sbjct: 83 SSKVAPNACTYSILIGCFCRMGR--LEHGFAAFGL-ILKTGWRVNVIVISQLLKGLCDAK 139
Query: 138 NVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
V A + + + +YN+++ R ++ A F +++ + + PP+V T
Sbjct: 140 RVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGI-PPNVVT 198
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
YTT+I G CK +++ AK VF M VKP+ YN +I+G+ G+ +E + + EM
Sbjct: 199 YTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMS 258
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G P+ +TY ++ LC NGR EA++ M G K +V+ + +L G G
Sbjct: 259 THGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALS 318
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ +L ++ ++P+ + + ++ + K +EA+ + +MR +GL P V SF A+
Sbjct: 319 EMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALI 378
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L + G +D A+L QM PN +++++ GLC G+ + E+L ++ G
Sbjct: 379 DALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTV-GKWEKAEELFFEVLDQGI 437
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+D ++ L+ C EG V ++ M+
Sbjct: 438 CVDAVFFNTLMCNLCNEGRVMEAQRLIDLMI 468
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 171/330 (51%), Gaps = 9/330 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI A G V A+ F+Q I G ++ ++SL+ L V + AEE F +++
Sbjct: 377 LIDALCKLGRVDDAVLQFNQ--MINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLD 434
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + D + T++ C G + A+++ D+M V+PN+++YNT++ G C G ++
Sbjct: 435 QGICV-DAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRID 493
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA K ++ M++ G +PNE TY ++ G C RVD+A L +M + G V+T+ ++L
Sbjct: 494 EAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTIL 553
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GL G+F +A N++ + D+ +Y +++NG CK DEA + + + ++ +
Sbjct: 554 HGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQ 613
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+FN + L++ G + A+ L + +P+ V+Y I L + +G + + +
Sbjct: 614 LDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENL-IEEGSLGEFDG 672
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
L M +SG + M + L++ G++
Sbjct: 673 LFSAMEKSGTAPNSHMLNALVRRLLHRGDI 702
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 169/355 (47%), Gaps = 23/355 (6%)
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
F ++ N V P+ + M Y K MIE A +F+ M + P+++++ +I+ C
Sbjct: 323 FLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALC 382
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G +++A N+M+N G PN +++++YGLC G+ ++A+ L ++ G +
Sbjct: 383 KLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAV 442
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
+++ LC G+ +A + ++ + P+V SY ++ G C G+ DEA LL M
Sbjct: 443 FFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVM 502
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ GLKP F++ + R + +D A L ++M P +YNTI+ GL GR
Sbjct: 503 VSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGL-FQTGR 561
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFL 477
+ +L MI S D Y+ +L G C+ V+ ++ + +K + L
Sbjct: 562 FSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQ-------L 614
Query: 478 TRVVDALLLMWIVTGG---------SWISRFVFVHQVV---VIMERTVEDGKRSE 520
V +++ ++ GG + IS + V VV +I E +E+G E
Sbjct: 615 DSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGE 669
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 10/232 (4%)
Query: 242 LEEAKKCMNEMMNRGCRPNEL-TYNAMIYGLCING------RVDEAKMLMAKMRLNGFKD 294
L+EA K +E+++ RP + +N ++ + G RV MA+ +
Sbjct: 30 LDEALKLFDELLH-CARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAP 88
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS-L 353
N T+ ++ C +G+ + +++ +V ++ G C + DEA L
Sbjct: 89 NACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDIL 148
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
L M G P V ++N V G++++A L +M PN V+Y T+I GLC
Sbjct: 149 LLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCK 208
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
A+ + + + +MI G D Y+CL+ GY G + V+Q+ EM T
Sbjct: 209 AQ-VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMST 259
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 105/248 (42%), Gaps = 4/248 (1%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
++ N K ++F + L++ Y V A F + + +YN++L L +
Sbjct: 502 MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK-PNL--LAYN 230
A E + ++ D+ TY ++ G CK ++ A K+F + K P L + +N
Sbjct: 562 FSEANELYLNMINSRT-KCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFN 620
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
MI K G E+A + G P+ +TY + L G + E L + M +
Sbjct: 621 IMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKS 680
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G N ++++ L G +A YL + E N + + + ++I+ + + A
Sbjct: 681 GTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHA 740
Query: 351 ISLLKEMR 358
SL ++ R
Sbjct: 741 KSLPEKYR 748
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 195/392 (49%), Gaps = 20/392 (5%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASL--LKNSNKLSDFF-ISKLIKAYGDRGNV 139
P+ +H P T + + S S SI L LK+S + + + LI+++ + +
Sbjct: 47 PSSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEI 106
Query: 140 KAAIFWFHQAKQIENGACLYS----YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
+ + K +EN YN L LV N +KL E ++V E +V DVS
Sbjct: 107 ENLL------KILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVL-DVS 159
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
T+ +I+ CK + A + + M +KP+ + + T++ GF ++G+L A K +M
Sbjct: 160 TFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQM 219
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ GC ++ ++ G C GRV+EA + ++ GF + T S++ G C +G
Sbjct: 220 LGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNV 279
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+ A+ + ++E +PDV +Y +I+G CK+G+ ++AI +L++M R P ++N +
Sbjct: 280 NDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTL 339
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE-DLVDRMIRS 431
L + E++ A L + + LP+ ++NT+I GLC++K QD+ ++ + M
Sbjct: 340 ISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKN--QDIAMEMFEEMKNK 397
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G D YS L+ C E ++ + + EM
Sbjct: 398 GCKPDEFTYSILIDSLCYERRLKEALMLLKEM 429
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 172/339 (50%), Gaps = 5/339 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIKA ++ AI + ++ +L+ + + A + Q++
Sbjct: 164 LIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYG 223
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKK-VFDVMT--VKPNLLAYNTMINGFCKKGELEEA 245
+ +VS ++ G+CK G +E A + V +V P+ + +N+++NGFC+ G + +A
Sbjct: 224 CLLTNVSV-KVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDA 282
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ M+ +G P+ TYN++I G+C G ++A ++ +M L N T+ +++
Sbjct: 283 LDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISA 342
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + + A R ++ + PDV ++ +I G C D A+ + +EM+ +G KP
Sbjct: 343 LCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPD 402
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
F+++ + L L A++LLK+M C N V YNT+I GLC ++ R++D E++
Sbjct: 403 EFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSR-RIEDAEEIF 461
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D+M G + Y+ L+ G C+ VE Q+ +M+
Sbjct: 462 DQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMI 500
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 193/414 (46%), Gaps = 45/414 (10%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
N++ K + + A+ +N P++ TT I + L+ +L + +L
Sbjct: 162 NVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGAL-KMKKQML 220
Query: 116 KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK 175
L++ + L+ + G V+ A+ + + + ++NSL+ R+ ++
Sbjct: 221 GYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVN 280
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTM 232
A + ++ E PDV TY ++I G CK+G E A ++ M ++ PN + YNT+
Sbjct: 281 DALDIVDFMI-EKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTL 339
Query: 233 INGFCKKGELEEAKK------------------------CMN-----------EMMNRGC 257
I+ CK+ E+E A C++ EM N+GC
Sbjct: 340 ISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGC 399
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
+P+E TY+ +I LC R+ EA ML+ +M +G N + +++ GLC + + A
Sbjct: 400 KPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEE 459
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
+ ++ +Y +I+G CK + +EA L+ +M GLKP F++N++
Sbjct: 460 IFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFC 519
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
G++++A +++ M C P+ +Y T+I GLC A GR+ D+ +++RS
Sbjct: 520 RVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRA-GRV----DVASKLLRS 568
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 180/389 (46%), Gaps = 40/389 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G + AI Q E +YN+L+ L + N I+ A + +V +
Sbjct: 304 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG 363
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP--------------------- 224
++P DV T+ T+I+G C + A ++F+ M KP
Sbjct: 364 LLP-DVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 422
Query: 225 --------------NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
N + YNT+I+G CK +E+A++ ++M G + +TYN +I G
Sbjct: 423 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDG 482
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC N RV+EA LM +M + G K + T+ S+L C VG ++A ++ + PD
Sbjct: 483 LCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ +Y +I G C+ G+ D A LL+ ++ +G+ T ++N V + L + L +
Sbjct: 543 IFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFR 602
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M + P+ +++ + GLC G +Q+ D M+ G +F + L +G C
Sbjct: 603 EMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSL 662
Query: 451 GNVENVMQIAHEMVTKKGRLLKLKNFLTR 479
+ ++++ + MV +K ++ + + + R
Sbjct: 663 SMEDTLIELIN-MVMEKAQMSERETSMIR 690
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 119/245 (48%), Gaps = 5/245 (2%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCM-NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
PN + T+I F E+E K + NE+ G +P+ YN + L + ++ +M
Sbjct: 88 PNATTFATLIQSFTNFHEIENLLKILENEL---GFKPDTNFYNIALNALVEDNKLKLVEM 144
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +KM G +VST ++K LC + A+ L + + PD ++ ++ GF
Sbjct: 145 LHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFI 204
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ G + A+ + K+M G T S + + G ++ A+ + ++ + P+ V
Sbjct: 205 EEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQV 264
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++N+++ G C G + D D+VD MI G + D Y+ L+ G C+ G E ++I +
Sbjct: 265 TFNSLVNGFCRI-GNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQ 323
Query: 463 MVTKK 467
M+ ++
Sbjct: 324 MILRE 328
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 38/197 (19%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y +L+G L R + +A + + + +V
Sbjct: 543 IFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIV--------------------------- 575
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC-INGR 276
+ P+ AYN +I + +E + EMM + P+ LT+ + GLC G
Sbjct: 576 ----LTPH--AYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGP 629
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME-ANMNPDVKSYE 335
+ EA +M G + + +GLC + D + + VME A M+ S
Sbjct: 630 IQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERETS-- 687
Query: 336 VVINGFCKIGKSDEAIS 352
+I GF KI K ++A++
Sbjct: 688 -MIRGFLKIRKFNDALA 703
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 181/383 (47%), Gaps = 64/383 (16%)
Query: 145 WFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
W + K ++ +++YN L L + N+ +LA E F Q+ + PPD TY+ ++RG
Sbjct: 27 WLGRQKGYQHS--VFTYNCFLDALAKANAGQLAYEKFQQMQRRGY-PPDDFTYSIVLRGL 83
Query: 205 CKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPN 260
CK G ++ AK++ + VK N++ Y+ +I+G CK +++A + M + G C P+
Sbjct: 84 CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPD 143
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+T+N+++ GLC R+ EA +L M G + NV ++ ++L GLC G+ D+A
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
++E + PD+ +Y + G CK + EA ++M +G K +F+ V IL + G
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263
Query: 381 ELDRA----------------------------------------------------ILL 388
+ A +LL
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323
Query: 389 LKQMPQMD---CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
++M M C PN +YN ++ LC AK ++ + ++LV+ M G + D YS L+
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAK-QLDEAQELVNEMANYGLSPDVVTYSALVD 382
Query: 446 GYCEEGNVENVMQIAHEMVTKKG 468
G C+ G ++ + EM +K+G
Sbjct: 383 GLCKLGKLDRACDLLEEM-SKEG 404
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 158/312 (50%), Gaps = 13/312 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+ N ++ L R + A + F +++ N PP + T+I CK + + +F
Sbjct: 268 AQNQMIEHLCRSGMLDEACKTFEEMISRNH-PPSAELFNTLIHAVCKSKRLPDGVLLFQR 326
Query: 220 MT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
M PNL YN M++ CK +L+EA++ +NEM N G P+ +TY+A++ GLC
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G++D A L+ +M G + T S+L L GK D A+ +L + PD+ +
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +++G CK G+ DEAI+ L +M A P VFS+ + L +G+ A + ++M
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMV 506
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG-HNLDFTMYSCLLKGYCEEGN 452
+ LP+ V Y++++ GL +EDL ++++ DF M+ +L G C+ G
Sbjct: 507 KRGVLPDTVLYHSLLDGL-----ARNGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGK 561
Query: 453 VENVMQIAHEMV 464
E+ ++ M
Sbjct: 562 AEDACEVVERMA 573
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 139/307 (45%), Gaps = 45/307 (14%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI A + + F + K ++ C L +YN ++ L + + A+E +++
Sbjct: 307 LIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMA 366
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---------------------- 223
+ PDV TY+ ++ G CK+G ++ A + + M+ +
Sbjct: 367 NYGL-SPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKV 425
Query: 224 ----------------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
P+L+ YNT+++G CK G ++EA + +M+ C P+ +Y +
Sbjct: 426 DYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTII 485
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I LC +G+ A + +M G + + S+L GL G D A+ L+ +
Sbjct: 486 ITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---C 542
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD +++V++G CK GK+++A +++ M G F++ +V L + G++D+A
Sbjct: 543 KPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQ 602
Query: 388 LLKQMPQ 394
L+ +
Sbjct: 603 LVDDASE 609
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 11/253 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLS----DFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+A+ D L + A LL+ +K F + ++ A G V A+ K
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ L +YN+LL L + I A F ++V P DV +YT +I C+ G
Sbjct: 437 ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTP-DVFSYTIIITALCRSGQA 495
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A +F M V P+ + Y+++++G + G + A + + + C+P+ + + +
Sbjct: 496 AGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMV 552
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ GLC G+ ++A ++ +M GF + T+ S++ GL +GK D+A + + E +
Sbjct: 553 LDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASETHT 612
Query: 328 NPDVKSYEVVING 340
+ + S E G
Sbjct: 613 SVERLSMEKAEAG 625
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 188/402 (46%), Gaps = 32/402 (7%)
Query: 95 YTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y + D L + +A SL +K + D + LI +G G + I F Q K
Sbjct: 59 YNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 118
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +YN+L+ + + A EF H++ K N + P+V TY+T I +CK GM+
Sbjct: 119 DADCDPDVITYNALINCFCKFERMPKAFEFLHEM-KANGLKPNVVTYSTFIDAFCKEGML 177
Query: 211 ENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A K F M + PN Y ++I+ CK G L EA K + E++ G + N +TY A+
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 237
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ GLC GR+ EA+ + M G N T+ +++ G + + A L+ + E +
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 297
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD+ Y ++ G C + +EA L+ E++ G+ + + ++G+ A+
Sbjct: 298 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALT 357
Query: 388 LLKQMPQM-------DC----------------LPNFVSYNTIICGLCMAKGRMQDVEDL 424
LL++M + +C +P+ ++Y +I G M G +Q+ +L
Sbjct: 358 LLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDG-NMKHGNLQEALNL 416
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
DRMI G LD Y+ L+ G G V+ + EM+ K
Sbjct: 417 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGK 458
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 133/259 (51%), Gaps = 4/259 (1%)
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
M+E A + F M V P + N +++ K G + ++K +M G + + TYN
Sbjct: 1 MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
MI LC G ++ A+ L +M+ GF ++ T+ S++ G +G D+ + + +A
Sbjct: 61 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ +PDV +Y +IN FCK + +A L EM+A GLKP V +++ + G L A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
I M ++ PN +Y ++I C A G + + LV+ ++++G L+ Y+ LL
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKA-GNLAEALKLVEEILQAGIKLNVVTYTALLD 239
Query: 446 GYCEEGNVENVMQIAHEMV 464
G CEEG ++ ++ M+
Sbjct: 240 GLCEEGRMKEAEEVFRAML 258
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 139/319 (43%), Gaps = 28/319 (8%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKL 129
A+ FF PN++ +T+ L+ +L + +L+ KL+ + L
Sbjct: 179 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEAL-KLVEEILQAGIKLNVVTYTAL 237
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
+ + G +K A F +Y +L+ ++ ++ A++ ++ KE
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM-KEKC 296
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTM-------------- 232
+ PD+ Y T++ G C +E AK + + + N + Y T+
Sbjct: 297 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 356
Query: 233 ---------INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
++G CK E AKK +EM+++G P+++ Y A+I G +G + EA L
Sbjct: 357 TLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNL 416
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+M G + ++ + +++ GL G+ +A L ++ + PD Y +I +
Sbjct: 417 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYA 476
Query: 344 IGKSDEAISLLKEMRARGL 362
+GK DEA+ L EM RG+
Sbjct: 477 LGKVDEALELQNEMAKRGM 495
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 178/375 (47%), Gaps = 38/375 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G + A+ K + +YN+L+ ++ + A++ +I N
Sbjct: 23 LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+ P+V TYTT+I YCK +E+A ++D MTVK P+++ Y ++NG CK G++EEA
Sbjct: 83 L-EPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K EM G PN +Y +I L G V EA +L +M + G +V + +++ G
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L G + A + ++E ++ P+ +Y +I+G CK+G ++ LL+EM + + P
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA----------- 414
V ++++ + G L+ A+ ++++M Q + LPN Y T+I G A
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321
Query: 415 -----------------------KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
GRM++ ++L M+ G D Y+ ++ G+ + G
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381
Query: 452 NVENVMQIAHEMVTK 466
+ IA EM K
Sbjct: 382 KESDAFNIAQEMTEK 396
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 192/415 (46%), Gaps = 47/415 (11%)
Query: 95 YTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAY--GDRGNVKAAIFWFHQ 148
Y++I D L++ A +++ N L + F+ LI Y D+ + +F +
Sbjct: 265 YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMK 324
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
++ +E + +S + L R ++ A+E F ++ ++P V+ YT+M+ G+ K G
Sbjct: 325 SRGLEENN--FVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN-YTSMMDGFFKAG 381
Query: 209 MIENAKKVFDVMTVK-------------------------------------PNLLAYNT 231
+A + MT K P+ +NT
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNT 441
Query: 232 MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG 291
MIN +CK+G L A K +NEM + G +PN +T N ++ LC G +++ L+ M + G
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
F +THK++L + D + ++ + D+ +Y +I+ FC++G A
Sbjct: 502 FHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRAT 561
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+ K+M +G+ + ++NA+ + L +A + QM PN +YN ++ GL
Sbjct: 562 LVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
A+ +++ LV++M G + T Y L+ G+ + GN++ +++ EM+TK
Sbjct: 622 SAAR-LIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK 675
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 166/376 (44%), Gaps = 74/376 (19%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ + ++ A + ++ +++VP DV TYT ++ G CK G +E AK VF
Sbjct: 89 TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVP-DVVTYTCIMNGLCKSGKVEEAKSVFRE 147
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR------------------ 258
M V PN +Y T+I+ K+G + EA M+ RG
Sbjct: 148 MEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGM 207
Query: 259 -----------------PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
PN +TY+A+I G C G V++ ++L+ +M NV + S
Sbjct: 208 ANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS 267
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G G ++A+ +R +++ N+ P+V Y +I+G+ K + A+ L KEM++RG
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+ F ++ L +G ++ A L K M LP+ V+Y +++ G A G+ D
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA-GKESDA 386
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKG----------------------------------Y 447
++ M D Y+ L+ G Y
Sbjct: 387 FNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAY 446
Query: 448 CEEGNVENVMQIAHEM 463
C+EGN+ N +++ +EM
Sbjct: 447 CKEGNLGNALKLLNEM 462
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 119/238 (50%), Gaps = 1/238 (0%)
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
+N +I+G+C+ GE+ A + + M G P+ +TYN ++ G C G + AK LM ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
L + NV T+ +++ C + A+ + ++ PDV +Y ++NG CK GK +
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
EA S+ +EM G+ P FS+ + L + G + A +L +M + V Y ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GL A G + ED+ ++ + YS L+ G+C+ G+V + EM K
Sbjct: 200 DGLFKA-GMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 102/191 (53%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M VK +L YNT+I+ FC+ G + A +MM +G + +TYNA+I+G CI+ + +
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A + ++M G NV T+ +L GL +A G + + E + P+ +Y+++++
Sbjct: 595 AFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G KIG E + L EM +G P ++N + + ++ +A L+++M P
Sbjct: 655 GHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPP 714
Query: 400 NFVSYNTIICG 410
N +Y+ +ICG
Sbjct: 715 NSSTYDILICG 725
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 154/360 (42%), Gaps = 43/360 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ ++ + G A + + +G + +YN L+ L ++ K E FH ++
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG--KYESESFHTGMR 428
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + PD +T+ TMI YCK G + NA K+ + M +KPN + N ++ C GE+E
Sbjct: 429 QLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE 488
Query: 244 EAKKCMNEMMNRGCRPNELT-----------------------------------YNAMI 268
+ +N+M+ G P T YN +I
Sbjct: 489 KTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLI 548
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
C G + A ++ M G ++ T+ +++ G C+ +A ++ ++
Sbjct: 549 STFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVS 608
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P+V++Y +++ G EA L+ +M+ RGL P +++ + + G + + L
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKG-RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+M +P +YN +I C AKG +M ++L+ M G + + Y L+ G+
Sbjct: 669 YCEMITKGFVPKTRTYNVLIS--CFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGW 726
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 16/222 (7%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN+L+ R+ I+ A F ++ + ++ D+ TY +I GYC ++ A V
Sbjct: 541 LSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA-DIITYNALIHGYCISSHLKKAFAVH 599
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V PN+ YN ++ G ++EA +N+M RG PN TY+ ++ G
Sbjct: 600 SQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKI 659
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + E L +M GF T+ ++ K QA ++ + + P+ +Y
Sbjct: 660 GNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTY 719
Query: 335 EVVINGFCKIGK------------SDEAISLLKEMRARGLKP 364
+++I G+ K+ K EA L +EM +G P
Sbjct: 720 DILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
+L + V+ + V+I+G+C+ G+ A+ LL+ M+ G P + ++N +
Sbjct: 4 HLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFC 63
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G+L A L+ ++ ++ PN ++Y T+I C ++ ++D + D M D
Sbjct: 64 KIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQC-LEDALYMYDEMTVKSLVPDV 122
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+C++ G C+ G VE + EM
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREM 148
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 186/358 (51%), Gaps = 6/358 (1%)
Query: 110 IAASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
AA L + SD ++ S LI Y + G ++ AI + ++ + L +L L
Sbjct: 39 FAAILETKGTQRSDIYVFSGLITXYLESGFLRDAIECYRLTREHKFWVPLDXCRKVLEHL 98
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPN 225
+++ KL F+ +I+ E P + + ++ +CK G I A+ VFD +T ++P+
Sbjct: 99 MKLKYFKLVWGFYKEIL-ECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPS 157
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++++NT++NG+ + G+L+E + N M G +P+ TY+ +I GLC ++D+A L
Sbjct: 158 VVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 217
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M G N T +++ G C G+ D A+ + ++ +++PD+ +Y + G CK G
Sbjct: 218 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKG 277
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+A L+ EM +GLKP ++ + + G+++ A K+M Q + + V Y
Sbjct: 278 DLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYT 337
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I GLC +GR D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 338 ALISGLC-QEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEM 394
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 123/209 (58%), Gaps = 14/209 (6%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y+ L+ L + + + A E F +++ + +VP V T+TT+I G+CK G ++ A +++
Sbjct: 193 VYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIY 251
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++ P+L+ YNT+ G CKKG+L++A ++EM +G +P+++TY +I G C
Sbjct: 252 KQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKE 311
Query: 275 GRVDEA-----KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G ++ A +M+ +RL D+V + +++ GLC G+ A LR ++ + P
Sbjct: 312 GDMETAFEHQKRMIQENIRL----DDV-VYTALISGLCQEGRSVDAEKMLREMLSVGLKP 366
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +Y ++IN FCK G LLKEM+
Sbjct: 367 NXGTYTMIINEFCKKGDVWTGSKLLKEMQ 395
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 115/257 (44%), Gaps = 19/257 (7%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGC------------------RPNELTYNAMIY 269
+Y TMI+ C L EAK + +++R R + ++ +I
Sbjct: 2 SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 61
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
+G + +A R + F + + +L+ L + F G+ + ++E
Sbjct: 62 XYLESGFLRDAIECYRLTREHKFWVPLDXCRKVLEHLMKLKYFKLVWGFYKEILECGYPA 121
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+ + ++++ FCK G A S+ + GL+P+V SFN + + G+LD L
Sbjct: 122 SLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 181
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
M P+ +Y+ +I GLC + +M D +L D M+ G + ++ L+ G+C+
Sbjct: 182 NAMHASGVQPDVYTYSVLINGLC-KESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCK 240
Query: 450 EGNVENVMQIAHEMVTK 466
G V+ M+I +M+++
Sbjct: 241 NGRVDLAMEIYKQMLSQ 257
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 170/348 (48%), Gaps = 40/348 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+ + ++ R + LA +I+K P+ T++T+I G C G + A ++
Sbjct: 123 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGY-EPNTITFSTLINGLCLEGRVSEALELV 181
Query: 218 DVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT----------- 263
D M KP+L+ NT++NG C G+ EA +++M+ GC+PN +T
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 264 ------------------------YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
Y+ +I GLC +G +D A L +M + G N+ T+
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ G C G++D LR++++ +NP+V ++ V+I+ F K GK EA L KEM
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RG+ P ++ ++ + LD+A ++ M C PN ++N +I G C A R+
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN-RID 420
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D +L +M G D Y+ L++G+CE G + ++ EMV++K
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 149/280 (53%), Gaps = 5/280 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+++ L+ V+ ++ AEE +++ + P D TYT++I G+CK ++ A ++ D+
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAP-DTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN+ +N +ING+CK +++ + +M RG + +TYN +I G C G+
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ AK L +M N+ T+K +L GLC G+ ++A+ + ++ M D+ Y +
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C K D+A L + +G+KP V ++N + L + G L A LL ++M +
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
P+ +YN +I + G L++ + R G ++D
Sbjct: 574 HAPDGWTYNILIRAH-LGDGDATKSVKLIEELKRCGFSVD 612
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 155/330 (46%), Gaps = 40/330 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L V+ + LA E ++ + N+ D Y+ +I G CK G ++NA +F+
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNI-KLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 220 MTVK---PNLLAYNTMINGFC-----------------------------------KKGE 241
M +K N++ YN +I GFC K+G+
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L EA++ EM++RG P+ +TY ++I G C +D+A ++ M G N+ T
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C + D + R + + D +Y +I GFC++GK + A L +EM +R
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P + ++ + L +NGE ++A+ + +++ + + YN II G+C A ++ D
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA-SKVDDA 527
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
DL + G Y+ ++ G C++G
Sbjct: 528 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 147/292 (50%), Gaps = 3/292 (1%)
Query: 177 AEEFFHQIVKENVVPP--DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMIN 234
A + F ++ +P D S + I + ++ K ++ + NL + MIN
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
FC+ +L A M +++ G PN +T++ +I GLC+ GRV EA L+ +M G K
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
++ T +++ GLC+ GK +A+ + ++E P+ +Y V+N CK G++ A+ LL
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
++M R +K ++ + L ++G LD A L +M N ++YN +I G C A
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GR D L+ MI+ N + +S L+ + +EG + ++ EM+ +
Sbjct: 312 -GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 5/233 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N L+ + N I E F ++ VV D TY T+I+G+C++G + AK++F
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGKLNVAKELF 461
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V PN++ Y +++G C GE E+A + ++ + YN +I+G+C
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+VD+A L + L G K V T+ M+ GLC G +A R + E PD +Y
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
++I G + +++ L++E++ G + V +L +G L ++ L
Sbjct: 582 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKSFL 633
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 121/244 (49%), Gaps = 1/244 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P ++ ++ + + K + + +M +G N T + MI C ++ A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M K+ G++ N T +++ GLC+ G+ +A+ + ++E PD+ + ++NG C
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GK EA+ L+ +M G +P ++ V ++ ++G+ A+ LL++M + + + V
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ II GLC G + + +L + M G + Y+ L+ G+C G ++ ++ +M
Sbjct: 266 YSIIIDGLC-KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 464 VTKK 467
+ +K
Sbjct: 325 IKRK 328
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 1/224 (0%)
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A +M++ P + ++ + + + D L +M L G N+ T M
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ C K A + +++ P+ ++ +ING C G+ EA+ L+ M G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KP + + N + L +G+ A+LL+ +M + C PN V+Y ++ +C + G+
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS-GQTALAM 248
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L+ +M LD YS ++ G C+ G+++N + +EM K
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ F D +++ L+ V K D A+ R+++ + P V + + + K + D
Sbjct: 46 FSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYD 105
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
++L K+M +G+ +++ + + +L A + ++ ++ PN ++++T+I
Sbjct: 106 LVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLI 165
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
GLC+ +GR+ + +LVDRM+ GH D + L+ G C G M + +MV
Sbjct: 166 NGLCL-EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 204/424 (48%), Gaps = 19/424 (4%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
+ +V+ + +P A FF WA N P H+ C + + + A LL
Sbjct: 44 EVAGRVLQQVEDPDVAWTFFQWAGN---KPGFQHNAYTC-AVLLNAFVKAKRHEEAHRLL 99
Query: 116 KNSNKL----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
K + ++ + +I + G V A + K+ + +++L+ L R
Sbjct: 100 KEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRK 159
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------VK 223
I A E F + +E P+V TY T++ G CK I+ A ++FD M +
Sbjct: 160 GRIDEALEQFKSMGEE--CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCE 217
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P++++Y+T+I+ CK +++A + M GC PN +TY+++I GLC R E L
Sbjct: 218 PDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLEL 277
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ M+ GF N+ +ML L + ++A + ++++ P+V +Y V ++G CK
Sbjct: 278 LLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCK 337
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+ DEA +L EM + P V +++++ + G +D+A + +M +C+P+ V+
Sbjct: 338 AGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVT 397
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ T++ G K + ++ + + M+ +G Y+ L+ C +VE+ ++I H+M
Sbjct: 398 FMTLLHGFSEHK-KSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKM 456
Query: 464 VTKK 467
KK
Sbjct: 457 KRKK 460
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 151/319 (47%), Gaps = 10/319 (3%)
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
G + +N++L L + + + A +FF +++K P+V TY + G CK G ++ A
Sbjct: 287 GINIIDFNAMLHALWKNDEQEKACQFFERLLKSGK-KPNVVTYNVAVHGLCKAGRVDEAY 345
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++ M V P+++ Y+++I+GFCK G +++A MM C P+ +T+ +++G
Sbjct: 346 RILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGF 405
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
+ + EA + M GF + T+ ++ +C + A+ + PD
Sbjct: 406 SEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDC 465
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I C+ + DEA L M A + P +A+ +L + GE+D A +L
Sbjct: 466 NTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDN 525
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS-GHNLDFTMYSCLLKGYCEE 450
+ ++ C P ++ ++ L + K + +++RS G D YS + C+
Sbjct: 526 VVEVGCQPLGETFKILVEELYLRKKW-----EAASKLLRSPGFVADAATYSLCVAEICKA 580
Query: 451 GNVENVMQIAHEMVTKKGR 469
G + +++ +MV K R
Sbjct: 581 GKPDEAVEVIEQMVLKGVR 599
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 140/341 (41%), Gaps = 79/341 (23%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN + L + + A ++V E+ V PDV TY+++I G+CK G ++ A VF
Sbjct: 327 TYNVAVHGLCKAGRVDEAYRILLEMV-ESKVTPDVITYSSIIDGFCKAGRMDKADDVFTR 385
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM--------- 267
M V P+ + + T+++GF + + EA + +M+N G P TYN +
Sbjct: 386 MMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADS 445
Query: 268 --------------------------IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
I LC RVDEAK + M + N + +
Sbjct: 446 VESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHA 505
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNP-------------------------------- 329
+++ LC G+ D+A L NV+E P
Sbjct: 506 LVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVA 565
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
D +Y + + CK GK DEA+ ++++M +G++P ++ AV R L ++ AI
Sbjct: 566 DAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEF 625
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
++M C P V+Y +I C A D+ D R
Sbjct: 626 EKMASRGCAPGLVTYTLLIGEACSA--------DMADEAFR 658
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 128/267 (47%), Gaps = 9/267 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN L+ + +S++ A E +H++ K PD +TY +I+ C+ ++ AK+
Sbjct: 430 LQTYNVLMDCVCGADSVESALEIYHKM-KRKKRQPDCNTYAPLIQCLCRARRVDEAKEFL 488
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
DVM V PN + ++ CK+GE++EA ++ ++ GC+P T+ ++ L +
Sbjct: 489 DVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLR 548
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+ + A L+ R GF + +T+ + +C GK D+AV + ++ + PD +Y
Sbjct: 549 KKWEAASKLL---RSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTY 605
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+ C + + + AI+ ++M +RG P + ++ + D A + + M
Sbjct: 606 VAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVA 665
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDV 421
P + T+ C+ QD+
Sbjct: 666 AGFTPQAQTMRTL--SSCLRDAGYQDL 690
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 186/407 (45%), Gaps = 16/407 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
Y A+ + I A L + + + + L+K D G + + + K++
Sbjct: 202 YAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGW 261
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
+Y +L+ + R + AE+ +++ ++P V T T ++ YC+ G + A
Sbjct: 262 RPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPC-VVTCTIVVNAYCREGRMSGAV 320
Query: 215 KVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+VF+ M K PN+ YN ++ GFC G++ +A +++M G P+ +TYN +I G
Sbjct: 321 RVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQ 380
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
CI+G + A L+ M NG + T+ ++ LC GK D+A + + P+
Sbjct: 381 CIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNS 440
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
++ VING CK GK D A + L+ M + G P ++++ L + + + +
Sbjct: 441 VTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDE 500
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M Q D P+ V+Y TI+ + + +M+ G + D Y+ ++ YC EG
Sbjct: 501 MLQKDVKPSTVNY-TIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEG 559
Query: 452 NVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISR 498
++ + EM KK R +VDA+ ++ G + I +
Sbjct: 560 RLDEAENVVTEM--KKCR---------TIVDAMAYNTLIDGHTSIGQ 595
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 152/306 (49%), Gaps = 8/306 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+ SLL R L F + + P +TY +IR C+ + +A++ +M
Sbjct: 96 FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+P+ +N++I G+C+ +LE A +M RG + ++Y A+I G C GR+
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRI 215
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DEA L +M + ++ TH +++KGLC G+ ++ + L+ + E P ++Y +
Sbjct: 216 DEALELFREMT----QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAAL 271
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++ +C+ K++EA +L EM GL P V + V G + A+ + + M C
Sbjct: 272 VDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC 331
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +YN I+ G C A G++ L+D+M G D Y+ L++G C +G++ +
Sbjct: 332 EPNVWTYNAIVQGFCNA-GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAF 390
Query: 458 QIAHEM 463
++ M
Sbjct: 391 RLLRLM 396
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 129/282 (45%), Gaps = 10/282 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK--LAEEF-FHQIV 185
+++ + + G V A+ Q ++ + +YN +L+R I + F +++
Sbjct: 341 IVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYN----LLIRGQCIDGHIGSAFRLLRLM 396
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ N + D TY +I CK G ++ A +FD + ++PN + +NT+ING CK G+
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKF 456
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ A + M++ G P+ TY+ I LC E + +M K + + +
Sbjct: 457 DVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIV 516
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ L + A ++ +PDV +Y + +C G+ DEA +++ EM+
Sbjct: 517 INRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRT 576
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
++N + G+ DRA+ +LK M + +PN ++
Sbjct: 577 IVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTF 618
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 131/320 (40%), Gaps = 25/320 (7%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
FI L K G + +F+ + Q + +Y ++ L + LA + Q+
Sbjct: 481 FIENLCKTKGS----QEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQM 536
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
V + PDV TYTT +R YC G ++ A+ V M + +AYNT+I+G G+
Sbjct: 537 VSQGC-SPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQ 595
Query: 242 LEEAKKCMNEMMNRGCRPNELTY--------------NAMIYGLCINGRVDEAKM--LMA 285
+ A + M PN T+ + + + ++ A + L
Sbjct: 596 TDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFE 655
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
M+ N + T+ S+L+G + D+ + + E N+ + Y ++N FCK+
Sbjct: 656 LMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLR 715
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+A +LL M G P + + + L G+ DRA + + + + + +
Sbjct: 716 MYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWK 775
Query: 406 TIICGLCMAKGRMQDVEDLV 425
II G + KG D++
Sbjct: 776 VIIDGF-IRKGHADMCHDMI 794
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 215 KVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++F++M +V + Y +++ GF ++ L+E ++ M NE YNA++
Sbjct: 652 ELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCF 711
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +A L+ M +GF N+ ++ +L GL G+ D+A R+ N D
Sbjct: 712 CKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDE 771
Query: 332 KSYEVVINGFCKIGKSD---EAISLLKEMRAR 360
++V+I+GF + G +D + IS+L++M+ +
Sbjct: 772 IVWKVIIDGFIRKGHADMCHDMISMLEQMKCK 803
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Query: 173 SIKLAEEF-FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+I+LA+ F +++K+N VP TY +++ G+ + ++ + +M + N
Sbjct: 644 TIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDI 703
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YN ++N FCK +A + M+ G PN + Y ++ GL G+ D AK + R
Sbjct: 704 YNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSR 763
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+ + K ++ G G D + + + P ++Y ++
Sbjct: 764 WKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAML 812
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 156/305 (51%), Gaps = 11/305 (3%)
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV--- 222
G+L++ +S LA+E N D+ TYTT++ K I+ A + + +T
Sbjct: 13 GMLIQAHS--LAQE-----TTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGC 65
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P + YN ++NG CK G LEEA + ++++ GC P+ +TY ++I GL R EA
Sbjct: 66 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYK 125
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M G + + ++++GL GK QA + + PDV + +I+G C
Sbjct: 126 LFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLC 185
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K G+ A+ + K M ARGL P ++A+ L + ++D A+ +L QM + C P+ +
Sbjct: 186 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 245
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YN +I GLC + G + D M+ +G D Y+ L+ G+C+ GN + + +
Sbjct: 246 TYNILIDGLCKS-GDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304
Query: 463 MVTKK 467
M + +
Sbjct: 305 MSSSR 309
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 155/335 (46%), Gaps = 18/335 (5%)
Query: 145 WFHQAKQIENGACLY-------------SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP 191
W + K+I+ L +YN+LL L ++ ++ A + +IV +N
Sbjct: 43 WLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV-DNGCT 101
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKC 248
PDV TYT++I G K A K+F M + + + Y +I G + G++ +A
Sbjct: 102 PDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSV 161
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M ++GC P+ +T + MI GLC GR+ A + M G N + +++ GLC
Sbjct: 162 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 221
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
K D A+ L + +A PD +Y ++I+G CK G A + EM G KP V++
Sbjct: 222 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYT 281
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + + G D A + M C PN V+Y T+I GLC + ++ M
Sbjct: 282 YNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRR-QLTKASLYYQHM 340
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G D +YS L+ G C+ G +E + EM
Sbjct: 341 KERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM 375
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 173/347 (49%), Gaps = 13/347 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLK--NSNKLSDFFIS--KLIKAYGDRGNVKAAIFWFHQAK 150
YT I D L + I A +L++ +N + + L+ G ++ AI K
Sbjct: 37 YTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR--K 94
Query: 151 QIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
++NG + +Y SL+ L + A + F ++ + D YT +IRG + G
Sbjct: 95 IVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLAL-DTVCYTALIRGLLQAG 153
Query: 209 MIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
I A V+ MT + P+++ +TMI+G CK G + A + M RG PNE+ Y+
Sbjct: 154 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYS 213
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
A+I+GLC ++D A ++A+M+ + T+ ++ GLC G A + ++EA
Sbjct: 214 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEA 273
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
PDV +Y ++I+GFCK G +D A + +M + P V ++ + L + +L +A
Sbjct: 274 GCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKA 333
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L + M + C P+ Y++++ GLC + G+++ L D M RSG
Sbjct: 334 SLYYQHMKERGCPPDSFVYSSLVDGLCKS-GKLEGGCMLFDEMERSG 379
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 1/235 (0%)
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
++ +ING K G L +A E GC + TY ++ L N ++ EA LM K+
Sbjct: 2 FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
NG ++T+ ++L GLC +G+ ++A+ LR +++ PDV +Y +I+G K +S
Sbjct: 62 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
EA L KEM +RGL + A+ R L++ G++ +A + K M C+P+ V+ +T+I
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GLC A GR+ + M G + +YS L+ G C+ ++ +++ +M
Sbjct: 182 DGLCKA-GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 235
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 153/310 (49%), Gaps = 14/310 (4%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLKNSNK---LSDFF-ISKLIKAYGDRGNVKAA--IFW 145
T CYTA+ LL I A+S+ K + D +S +I G + AA IF
Sbjct: 139 TVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFK 198
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+A+ + +YS +L+ L + + A E Q+ K+ PD TY +I G C
Sbjct: 199 SMEARGLAPNEVVYS--ALIHGLCKARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLC 255
Query: 206 KMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
K G + A+ FD M KP++ YN +I+GFCK G + A ++M + C PN +
Sbjct: 256 KSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVV 315
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
TY +I GLC ++ +A + M+ G + + S++ GLC GK + L +
Sbjct: 316 TYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGC-MLFDE 374
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
ME + + ++ +I CK + DEA+SL +R G+ P +++N++ L+++G++
Sbjct: 375 MERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKV 433
Query: 383 DRAILLLKQM 392
+ + ++M
Sbjct: 434 NEGQAVYQEM 443
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 136/306 (44%), Gaps = 42/306 (13%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ L++ I A + + + VP DV T +TMI G CK G I A ++F M
Sbjct: 142 YTALIRGLLQAGKIPQASSVYKTMTSQGCVP-DVVTLSTMIDGLCKAGRIGAAVRIFKSM 200
Query: 221 TVK--------------------------------------PNLLAYNTMINGFCKKGEL 242
+ P+ + YN +I+G CK G++
Sbjct: 201 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 260
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
A+ +EM+ GC+P+ TYN +I G C G D A + M + NV T+ ++
Sbjct: 261 AAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTL 320
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC + +A Y +++ E PD Y +++G CK GK + L EM G+
Sbjct: 321 ISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 380
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+ +F + N +D A+ L + + + +P+ +YN+II L + G++ + +
Sbjct: 381 ANSQTRTRLIFHLCKAN-RVDEAVSLFNAI-RKEGMPHPYAYNSIISAL-IKSGKVNEGQ 437
Query: 423 DLVDRM 428
+ M
Sbjct: 438 AVYQEM 443
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 171/346 (49%), Gaps = 18/346 (5%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y I D L L+S A +L + + S +I + G + A+ + ++
Sbjct: 206 YNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMV 265
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+Y YN+L+ L + +K A+ IVK + P+V TY T+I GY
Sbjct: 266 LKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVK-TCLKPNVITYNTLIDGY------ 318
Query: 211 ENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
AK VF+ +M V P++ +YN MIN CK +EEA EM + PN +TYN++
Sbjct: 319 --AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSL 376
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC +GR+ A L+ +M G NV T+ S++ GLC G+ D+A+ + + + +
Sbjct: 377 IDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGI 436
Query: 328 NPDVKSYEVVINGF-CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
PD+ + ++++G CK + A L +++ +G P V+++N + + G LD A
Sbjct: 437 QPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAY 496
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L +M C PN +++ IIC L + KG E L+ MI G
Sbjct: 497 ALQSKMEDSGCSPNAITFKIIICAL-LEKGETDKAEKLLCEMIARG 541
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 198/402 (49%), Gaps = 38/402 (9%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE 153
C+ + + L+ S++S +LK + ++ LIK +G VK A+ FH K +
Sbjct: 107 CFCHLGQINLAFSVLS---KILKWGYQPDTVTLTTLIKGLCLKGQVKKALH-FHD-KLLA 161
Query: 154 NGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
G L SY +L+ + ++ + A + +I + P+V Y T+I CK ++
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRI-DGRLTEPNVVMYNTIIDCLCKRKLVS 220
Query: 212 NAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
A +F M+VK N++ Y+ +I+GFC G+L EA +NEM+ + P+ YN ++
Sbjct: 221 EACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLV 280
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG----------------------- 305
L G+V EAK ++A + K NV T+ +++ G
Sbjct: 281 DALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNI 340
Query: 306 ----LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
LC + + ++A+ + + + NM P+ +Y +I+G CK G+ A L+ EM RG
Sbjct: 341 MINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRG 400
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
V ++N++ L +NG+LD+AI L+ +M P+ + N ++ GL R+++
Sbjct: 401 HHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNA 460
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ L ++ G++ + Y+ ++ G+C+EG ++ + +M
Sbjct: 461 QGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKM 502
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 121/209 (57%), Gaps = 5/209 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++SYN ++ L ++ ++ A + ++ ++N+VP V TY ++I G CK G I A +
Sbjct: 335 VWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTV-TYNSLIDGLCKSGRISYAWDLI 393
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL-CI 273
D M + N++ YN++ING CK G+L++A +N+M ++G +P+ T N +++GL C
Sbjct: 394 DEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCK 453
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
R+ A+ L + G+ NV T+ ++ G C G D+A + ++ +P+ +
Sbjct: 454 GKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAIT 513
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGL 362
++++I + G++D+A LL EM ARGL
Sbjct: 514 FKIIICALLEKGETDKAEKLLCEMIARGL 542
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 139/273 (50%), Gaps = 5/273 (1%)
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMG---MIENAKKVFDVMTVKPNLLAYNTMINGFC 237
FH+++ PP + + ++ + KM + + + ++ ++P+ N +IN FC
Sbjct: 51 FHRMLCMRHTPP-IIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFC 109
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G++ A +++++ G +P+ +T +I GLC+ G+V +A K+ GF+ +
Sbjct: 110 HLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQV 169
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
++ +++ G+C +G+ A+ LR + P+V Y +I+ CK EA +L EM
Sbjct: 170 SYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEM 229
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+G+ V +++A+ G+L A+ L +M P+ YNT++ L +G+
Sbjct: 230 SVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL-HKEGK 288
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+++ ++++ ++++ + Y+ L+ GY +
Sbjct: 289 VKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKH 321
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D A+ ++ P + + +++ F K+ +SL + + + ++P F+ N +
Sbjct: 45 DDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNIL 104
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
G+++ A +L ++ + P+ V+ T+I GLC+ KG+++ D+++ G
Sbjct: 105 INCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCL-KGQVKKALHFHDKLLAQG 163
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
LD Y L+ G C+ G +Q+ + GRL
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRI---DGRL 198
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 86/225 (38%), Gaps = 36/225 (16%)
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A +M + +L + + V R + + PD + +
Sbjct: 44 VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR------------ 384
+IN FC +G+ + A S+L ++ G +P + + + L G++ +
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163
Query: 385 -----------------------AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
AI LL+++ PN V YNTII LC K + +
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRK-LVSEA 222
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L M G + + YS ++ G+C G + + +EMV K
Sbjct: 223 CNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLK 267
>gi|255660944|gb|ACU25641.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 481
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 206/428 (48%), Gaps = 25/428 (5%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ N HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHGAKNSEHALQFFRWVERSNL----FXHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SY++L V++R
Sbjct: 70 DMPKKGLEWDEDLWVL-MIDSYGKAGIVQESVKMFQKMEELGVXRTIKSYDALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E + + F M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETSNRFFXDMXSREITPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EE +K EM R P +TY +I G RVD+A L +M+
Sbjct: 188 YNTMINGYYRVBKMEEXEKYFVEMKGRNIEPTVVTYTTLIKGYXSVDRVDBALXLXEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ ++ P D + +I+G CK+G
Sbjct: 248 XFGIKPNAITYSTLLPGLCDAEKMSEARSILKEMVXKYXAPTDNSIFMRLISGQCKVGDL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM--------PQMDCLP 399
D A +JK M + + + + G+ D+A+ LL ++ PQ
Sbjct: 308 DAAADVJKAMIRLSIPTEAGHYGVLIEXYCKAGQYDKAVKLLDKVIEKDIISRPQNTLXM 367
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+YN +I LC G+ E LV +++ G D T + L++G+ EG+ ++ ++
Sbjct: 368 EPSAYNXLIEYLC-NNGQTAKAETLVRZLMKLGVQ-DPTALNTLIRGHSXEGSPDSAFEL 425
Query: 460 AHEMVTKK 467
M+ +K
Sbjct: 426 LKIMLRRK 433
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 148/319 (46%), Gaps = 9/319 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHGAKNSEHALQFFRWVERSNLFXHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K G ++E+ K +M G +Y+A
Sbjct: 63 HARCILLDMPKKG--LEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVXRTIKSYDA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + + + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETSNRFFXDMXSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PDV +Y +ING+ ++ K +E EM+ R ++PTV ++ + + +D A+
Sbjct: 181 ITPDVVTYNTMINGYYRVBKMEEXEKYFVEMKGRNIEPTVVTYTTLIKGYXSVDRVDBAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI-RSGHNLDFTMYSCLLK 445
L ++M PN ++Y+T++ GLC A+ +M + ++ M+ + D +++ L+
Sbjct: 241 XLXEEMKXFGIKPNAITYSTLLPGLCDAE-KMSEARSILKEMVXKYXAPTDNSIFMRLIS 299
Query: 446 GYCEEGNVENVMQIAHEMV 464
G C+ G+++ + M+
Sbjct: 300 GQCKVGDLDAAADVJKAMI 318
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 150/279 (53%), Gaps = 6/279 (2%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
V PDV TY T+IRG C ++ A ++ + M ++PN++ Y+ +++G+CK G E
Sbjct: 125 VRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVG 184
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
K EM RG P+ + Y A+I LC +G+V +A +M M G + NV T+ ++ +
Sbjct: 185 KVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSM 244
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR--ARGLKP 364
C G +A+ +N+ E + PDV +Y +I G + + DEA++LL+EM ++P
Sbjct: 245 CKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRP 304
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ +FN+V L + G + +A+ + M + C N V++N +I GL +++ +L
Sbjct: 305 DLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVH-KVKKAMEL 363
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+D M SG D YS L+ G+C+ VE EM
Sbjct: 364 MDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEM 402
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 164/309 (53%), Gaps = 7/309 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+ L + A E +++ E+ + P+V Y+ ++ GYCK G E+ KVF+
Sbjct: 131 TYGTLIRGLCDAADVDTAVELLNEMC-ESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEE 189
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ ++P+++ Y +I+ C+ G++++A + M+ M RG PN +TYN +I +C G
Sbjct: 190 MSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGS 249
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM--EANMNPDVKSY 334
V EA L M G + +V T+ +++ GL V + D+A+ L +M E + PD+ ++
Sbjct: 250 VREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTF 309
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
VI+G CKIG +A+ + M G + + +FN + L+ ++ +A+ L+ +M
Sbjct: 310 NSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMAS 369
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ +Y+ +I G C + +++ E + M G + Y LLK C++G +
Sbjct: 370 SGLQPDSFTYSILINGFCKMR-QVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMG 428
Query: 455 NVMQIAHEM 463
+ +EM
Sbjct: 429 QARDLFNEM 437
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 216/517 (41%), Gaps = 88/517 (17%)
Query: 30 RLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNP---NPNPN 86
RL P SP +S+ P + N V + Q ALF S+ PN
Sbjct: 36 RLLPLPESPALLSALP--SVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPN 93
Query: 87 KYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWF 146
+TT D + + + + S+ + LI+ D +V A+
Sbjct: 94 AISYTTLMRALCADRRAAQA-VGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELL 152
Query: 147 HQ--AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
++ IE +YS LL + + + F ++ + PDV YT +I
Sbjct: 153 NEMCESGIEPNVVVYS--CLLHGYCKTGRWESVGKVFEEMSGRGI-EPDVVMYTALIDSL 209
Query: 205 CKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
C+ G ++ A +V D+MT ++PN++ YN +IN CK+G + EA M +G +P+
Sbjct: 210 CRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDV 269
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNG---FKDNVSTHKSMLKGLCVVGKFDQAV-- 316
+TYN +I GL +DEA L+ +M + G + ++ T S++ GLC +G QA+
Sbjct: 270 VTYNTLITGLSSVLEMDEAMALLEEM-MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQV 328
Query: 317 ---------------------GYLR-----NVME-------ANMNPDVKSYEVVINGFCK 343
G LR ME + + PD +Y ++INGFCK
Sbjct: 329 RAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCK 388
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG----------ELDR--------- 384
+ + + A S L EMR +G++P + + + + + G E+DR
Sbjct: 389 MRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAY 448
Query: 385 ---------------AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
A LK M +P+ V+Y+ I + G + E ++ +M
Sbjct: 449 STMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPI-NMFAKSGDLAAAERVLKQMT 507
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
SG D ++ L++GY +G+ E ++++ EM K
Sbjct: 508 ASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAK 544
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 164/359 (45%), Gaps = 42/359 (11%)
Query: 95 YTAITDVLLSHSLISIAASLLK--NSNKLSDFFISK--LIKAYGDRGNVKAAIFWFHQAK 150
YTA+ D L H + AA ++ L ++ LI + G+V+ A+
Sbjct: 202 YTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMS 261
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK-ENVVPPDVSTYTTMIRGYCKMGM 209
+ + +YN+L+ L V + A ++++ E V PD+ T+ ++I G CK+G
Sbjct: 262 EKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGW 321
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+ A +V +M + NL+A+N +I G + ++++A + M+EM + G +P+ TY+
Sbjct: 322 MRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSI 381
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG--------- 317
+I G C +V+ A+ +++MR G + + +LK +C G QA
Sbjct: 382 LINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNC 441
Query: 318 -------------------------YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+L+++++ + PD +Y + IN F K G A
Sbjct: 442 KLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAER 501
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+LK+M A G P V F+++ + G+ ++ + L ++M D + +TI+ L
Sbjct: 502 VLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL 560
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 48/259 (18%)
Query: 143 IFWFHQAKQI-----ENGA-C-LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
I W QA Q+ ENG C L ++N L+G L+RV+ +K A E ++ + PD
Sbjct: 319 IGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGL-QPDSF 377
Query: 196 TYTTMIRGYCKM-----------------------------------GMIENAKKVFDVM 220
TY+ +I G+CKM GM+ A+ +F+ M
Sbjct: 378 TYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM 437
Query: 221 --TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
K + AY+TMI+G K GE + A++ + +M++ G P+ +TY+ I +G +
Sbjct: 438 DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLA 497
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
A+ ++ +M +GF +V+ S+++G G ++ + R + ++ D K ++
Sbjct: 498 AAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIV 557
Query: 339 NGFCKIGKSDEAISLLKEM 357
+G S E LL+ +
Sbjct: 558 T---SLGASIEGQKLLQSL 573
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 166/350 (47%), Gaps = 42/350 (12%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N LL VR + A + F + + PD TY+T+I G+CK + A ++ D M
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLC-GLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ P+ YNT+I G C G ++ A +M R C P+ +TY ++ LC + R+
Sbjct: 61 KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARIS 119
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A +++ M G NV T+ +++ G C +G D+AV ++E + +PDV +Y ++I
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179
Query: 339 NGFCKIGKSDEAISLLKEMRA-----------------------------------RGLK 363
+G+CK + + LL+EM R K
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P+ F+FN + + + G+LD A L + M CLP+ +YN +I G C A R+ D
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN-RIDDARQ 298
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKL 473
L++RM +G D Y+ ++ G C+ V+ ++ +E++ G L +
Sbjct: 299 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV-YEVLRNGGYFLDV 347
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 172/341 (50%), Gaps = 6/341 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IK D G V +A+ + Q + +Y L+ L + I A ++ E
Sbjct: 74 IIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMI-EA 131
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
P+V TY T+I G+CK+G ++ A +F+ M + P++ YN +I+G+CK+ ++
Sbjct: 132 GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDG 191
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + EM+ GC PN +TYN ++ L +G+ +A L M K + T M+
Sbjct: 192 AKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDM 251
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C VG+ D A + + + PD+ +Y ++I+G C+ + D+A LL+ M G P
Sbjct: 252 FCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPD 311
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V ++N++ L + ++D A + + + + V+ +T+I GLC ++ R+ D E L+
Sbjct: 312 VVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR-RLDDAEKLL 370
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M R+G D Y+ L+ G+C+ ++ + EM+ K
Sbjct: 371 REMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 411
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 171/357 (47%), Gaps = 18/357 (5%)
Query: 89 HHTTP---CYTAITDVLLSHSLISIAASLLKN-------SNKLSDFFISKLIKAYGDRGN 138
H P YT + D L + IS A+ +L++ N ++ + LI + GN
Sbjct: 96 RHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVT---YNTLINGFCKLGN 152
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
+ A+ F+Q + +++YN L+ + + + ++VK P+ TY
Sbjct: 153 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC-EPNFITYN 211
Query: 199 TMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
T++ K G +A + +M KP+ +N MI+ FCK G+L+ A + M +R
Sbjct: 212 TLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR 271
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
GC P+ TYN MI G C R+D+A+ L+ +M G +V T+ S++ GLC + D+A
Sbjct: 272 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 331
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ DV + +I+G CK + D+A LL+EM G P V ++ +
Sbjct: 332 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 391
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ +LD+++ +M C+P ++Y+ +I LC + R++D L+ M+ G
Sbjct: 392 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKS-ARVRDGCMLLKTMLERG 447
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 117/207 (56%), Gaps = 4/207 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+++N ++ + +V + LA E F Q++ + PD+ TY MI G C+ I++A+++ +
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELF-QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 301
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
MT P+++ YN++++G CK +++EA + + N G + +T + +I GLC +
Sbjct: 302 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 361
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R+D+A+ L+ +M NG +V + ++ G C + D+++ + +++ P V +Y
Sbjct: 362 RLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYS 421
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGL 362
+VI+ CK + + LLK M RG+
Sbjct: 422 IVIDKLCKSARVRDGCMLLKTMLERGV 448
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 168/333 (50%), Gaps = 8/333 (2%)
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
D G V+ I + + IE A + +Y L+ L I E F+++ NVV DV
Sbjct: 227 DDGRVQE-ILEIMENEGIE--ATVGTYTILVDSLSTARDISKVEALFNEMKANNVVG-DV 282
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
YT +I YC+ G + A KV D V+PN Y +INGFCK G++E A+ + +
Sbjct: 283 YLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLAD 342
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M +G N++ +N MI G C G VD+A + A M G + ++ T+ ++ GLC V +
Sbjct: 343 MQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNR 402
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+A L ++E + P+ +Y +I+ CK G EA L +EM +G P+V ++N
Sbjct: 403 LDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNV 462
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ + G + A K+M + +P+ +Y +++ G C+ G++ L + M +
Sbjct: 463 MIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCV-NGKVDVALKLFEEMKQR 521
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G + Y+ L+ G +EG E Q+ +M+
Sbjct: 522 GTEPNVVAYTALISGLAKEGRSEAAFQLYDDML 554
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 163/330 (49%), Gaps = 12/330 (3%)
Query: 91 TTPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWF 146
T YT + D L + IS +L +K +N + D ++ + +I AY GN++ A
Sbjct: 246 TVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVL 305
Query: 147 HQAKQIENGA--CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
+ + NG +Y L+ ++ ++ AE + + V + + TMI GY
Sbjct: 306 DEC--VGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQI-IFNTMIDGY 362
Query: 205 CKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
C+ GM+++A K+ + M V+ ++ YNT+ G C+ L+EAK ++ M+ G PN
Sbjct: 363 CRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNY 422
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+TY +I C +G + EA+ L +M G +V T+ M+ G G +A + +
Sbjct: 423 VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKE 482
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ + PDV +Y +++G C GK D A+ L +EM+ RG +P V ++ A+ L + G
Sbjct: 483 MEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGR 542
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+ A L M + +P+ Y+ ++ L
Sbjct: 543 SEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 127/235 (54%), Gaps = 4/235 (1%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
L+ + +I Y +G V A+ +++ +Y+YN+L L RVN + A+
Sbjct: 350 LNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTL 409
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFC 237
H +++ VVP V TYTT+I +CK G + A+++F M K P+++ YN MI+G+
Sbjct: 410 LHIMIEMGVVPNYV-TYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYT 468
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
KKG + EA++ EM +G P+ TY ++++G C+NG+VD A L +M+ G + NV
Sbjct: 469 KKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVV 528
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ +++ GL G+ + A ++++A + PD Y ++ + D +S
Sbjct: 529 AYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDVKVS 583
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 136/272 (50%), Gaps = 4/272 (1%)
Query: 198 TTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+ ++ G CK G +++A+++ D M V N L YN++++ + ++ + ++ + M N
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
G TY ++ L + + + L +M+ N +V + +++ C G +
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A L + + P+ ++Y V+INGFCKIG+ + A LL +M+ +G+ FN +
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 360
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
G +D A+ + M +M + +YNT+ CGLC R+ + + L+ MI G
Sbjct: 361 GYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVN-RLDEAKTLLHIMIEMGVV 419
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ Y+ L+ +C++G++ ++ EM K
Sbjct: 420 PNYVTYTTLISIHCKDGDMVEARRLFREMAEK 451
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 147/266 (55%), Gaps = 10/266 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++++L+ V+ + AE+ + ++VK ++ P + TY+++I G+C ++ AK++F
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMF 179
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K P+++ YNT+I GFCK +EE + EM RG N +TYN +I GL
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A+ + +M +G N+ T+ ++L GLC GK ++A+ + + M P + +Y
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I G CK GK ++ L + +G+KP V ++N + G + A L K+M +
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQD 420
LPN YNT+I + R++D
Sbjct: 360 DGTLPNSGCYNTLI------RARLRD 379
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 162/307 (52%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L A ++ E + PDV T++ +I + K G + A+K++D
Sbjct: 88 TYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 146
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ P+++ Y+++INGFC L+EAK+ M+++ C P+ +TYN +I G C R
Sbjct: 147 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 206
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+E + +M G N T+ +++GL G D A + ++ + P++ +Y
Sbjct: 207 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 266
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G CK GK ++A+ + + ++ ++PT++++N + + + G+++ L +
Sbjct: 267 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 326
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+YNT+I G C KG ++ + L M G + Y+ L++ +G+ E
Sbjct: 327 VKPDVVAYNTMISGFC-RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 385
Query: 457 MQIAHEM 463
++ EM
Sbjct: 386 AELIKEM 392
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 158/301 (52%), Gaps = 5/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y ++ L + LA +++ ++ + P V Y T+I G CK +++A +F
Sbjct: 16 LVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 74
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++PN++ Y+++I+ C G +A + +++M+ R P+ T++A+I
Sbjct: 75 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 134
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++ EA+ L +M ++ T+ S++ G C+ + D+A ++ + PDV +Y
Sbjct: 135 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 194
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I GFCK + +E + + +EM RGL ++N + + L + G+ D A + K+M
Sbjct: 195 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 254
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN ++YNT++ GLC G+++ + + + RS Y+ +++G C+ G VE
Sbjct: 255 DGVPPNIMTYNTLLDGLC-KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313
Query: 455 N 455
+
Sbjct: 314 D 314
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 132/243 (54%), Gaps = 1/243 (0%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P+L+ Y ++NG CK+G+ + A +N+M P L YN +I GLC +D+A
Sbjct: 13 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 72
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M G + NV T+ S++ LC G++ A L +++E +NPDV ++ +I+ F
Sbjct: 73 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 132
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K GK EA L EM R + P++ +++++ + LD A + + M C P+ V
Sbjct: 133 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 192
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YNT+I G C K R+++ ++ M + G + Y+ L++G + G+ + +I E
Sbjct: 193 TYNTLIKGFCKYK-RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 251
Query: 463 MVT 465
MV+
Sbjct: 252 MVS 254
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 114/215 (53%), Gaps = 1/215 (0%)
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ M+ +GC+P+ +TY ++ GLC G D A L+ KM + V + +++ GLC
Sbjct: 4 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 63
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
D A+ + + + P+V +Y +I+ C G+ +A LL +M R + P VF+
Sbjct: 64 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 123
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
F+A+ V+ G+L A L +M + P+ V+Y+++I G CM R+ + + + + M
Sbjct: 124 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD-RLDEAKQMFEFM 182
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ D Y+ L+KG+C+ VE M++ EM
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 217
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 148/335 (44%), Gaps = 44/335 (13%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSD--FFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+++ L ++ S A+ LL + K++ F S LI A+ G + A + +
Sbjct: 89 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 148
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +Y+SL+ + + A++ F +V ++ P DV TY T+I+G+CK +
Sbjct: 149 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP-DVVTYNTLIKGFCKYKRV 207
Query: 211 ENAKKVFDVMT--------------------------------------VKPNLLAYNTM 232
E +VF M+ V PN++ YNT+
Sbjct: 208 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 267
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
++G CK G+LE+A + P TYN MI G+C G+V++ L + L G
Sbjct: 268 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 327
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
K +V + +M+ G C G ++A + + E P+ Y +I + G + +
Sbjct: 328 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 387
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
L+KEMR+ G + V +L +G LD++ L
Sbjct: 388 LIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSFL 421
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L+ +M G + ++ T+ ++ GLC G D A L + + + P V Y +I+G C
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K D+A++L KEM +G++P V +++++ L G A LL M + P+
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+++ +I + +G++ + E L D M++ + YS L+ G+C ++ Q+
Sbjct: 123 TFSALIDAF-VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181
Query: 463 MVTK 466
MV+K
Sbjct: 182 MVSK 185
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
++L+ M A+G +P + ++ V L + G+ D A LL +M Q P + YNTII G
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
LC K M D +L M G + YS L+ C G + ++ +M+ +K
Sbjct: 61 LCKYK-HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 116
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 156/309 (50%), Gaps = 18/309 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+YN ++ L + A F Q+ K VP +V Y+T+I GYC G ++ A+ VF
Sbjct: 167 VYTYNVIINSLSKSGKANEALGFLKQMEKVGCVP-NVVNYSTLIDGYCLRGQMDEARSVF 225
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D+M K PN+ Y +++NG+CK +EEA + ++E + +G P+ +T+ +I GLC
Sbjct: 226 DLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRA 285
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR A+ L + +G N+ T+ +L GLC G ++A + + + + P++ Y
Sbjct: 286 GRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIY 345
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I+ CK GK + L + GLKP V+++ A+ L + G + A L ++M +
Sbjct: 346 TILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEE 405
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL----------- 443
C P+ +YN II G K LV+ M+ G + D + L
Sbjct: 406 DGCTPDKCAYNVIIQGFLQHKDPSM-ARQLVEEMVNRGFSADAATRALLNDFPTNDIPAL 464
Query: 444 --LKGYCEE 450
L G+CE+
Sbjct: 465 KTLIGFCED 473
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 171/340 (50%), Gaps = 5/340 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
SKL + G+ + ++ + + + ++S + L+ ++ + +I+K
Sbjct: 66 SKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILK 125
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ P + T+TT++ G C G ++ ++D M V+ PN+ YN +IN K G+
Sbjct: 126 LGL-EPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKAN 184
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +M GC PN + Y+ +I G C+ G++DEA+ + M G NV T+ S++
Sbjct: 185 EALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLM 244
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C + + ++AV L + + PD+ ++ +I+G C+ G+ A L + + A G
Sbjct: 245 NGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHT 304
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + ++ + L ++G L+ A L ++M + PN V Y +I LC G+++D ++
Sbjct: 305 PNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKC-GKIKDGKE 363
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L R+I G + Y+ L+ C+EG + ++ +M
Sbjct: 364 LFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 131/261 (50%), Gaps = 3/261 (1%)
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A M+ R P + ++ + + G + L ++ G + ++ + +
Sbjct: 44 DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ C + + D + L +++ + P + ++ ++NG C GK D+ + L +M RGL
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+P V+++N + L ++G+ + A+ LKQM ++ C+PN V+Y+T+I G C+ +G+M +
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCL-RGQMDEAR 222
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVD 482
+ D M+ G + Y+ L+ GYC+ +E +Q+ E + +KG + + F T ++
Sbjct: 223 SVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETL-RKGLVPDIVTF-TTIIS 280
Query: 483 ALLLMWIVTGGSWISRFVFVH 503
L + R++ H
Sbjct: 281 GLCRAGRPLAAQQLFRYICAH 301
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 132/291 (45%), Gaps = 39/291 (13%)
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
++A F +M ++ P ++ ++ + + + G E E+ G + + + +
Sbjct: 44 DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I C RVD +++K+ G + ++ T ++L GLC+ GK DQ + +++ +
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN----------------A 371
P+V +Y V+IN K GK++EA+ LK+M G P V +++ +
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223
Query: 372 VFRILVENG-------------------ELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
VF ++V G ++ A+ LL + + +P+ V++ TII GLC
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
A GR + L + GH + Y LL G C+ GN+E + EM
Sbjct: 284 RA-GRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEM 333
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 150/277 (54%), Gaps = 6/277 (2%)
Query: 137 GNVKAAIFWFHQAKQI--ENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
G AA+ +F + + + E +Y++L+G L+ N++ +A E FH+ + E PD
Sbjct: 295 GRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH-SPDA 353
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
Y TMI G + G +E+A + M K + AYN +I GFC+K L EA + + E
Sbjct: 354 IMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQE 413
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M G RP+ TYN ++ G C G L+ KM +G + +V T +++ G C VGK
Sbjct: 414 MKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGK 473
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+A+ LR++ E+ ++P+ Y +I+ CK G D AI L EM+ + + V +FNA
Sbjct: 474 IDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNA 533
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+ + L + ++A L+ QM + C P++V+ + ++
Sbjct: 534 LLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLM 570
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 162/350 (46%), Gaps = 45/350 (12%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++NS+L L RV + + + V PDV TY ++ G CK G + +A +V
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 218 DVMT-----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN--RGCRPNELTYNAMIYG 270
D M+ ++P+++ NT+++G CK G ++EA + + M+ GC PN +TYN +I
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR---------- 320
C G + A L+ KM G N+ T +++ GLC G+ A+ + R
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGK 315
Query: 321 -----------------NV----------MEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
NV M +PD Y +I+G + G+ ++A S+
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSM 375
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
M+ G K ++N + L A LL++M ++ P+ +YNT++ G C
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK 435
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
A G V++L+ +MI G + L+ GYC+ G ++ ++I M
Sbjct: 436 A-GDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSM 484
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 163/338 (48%), Gaps = 9/338 (2%)
Query: 137 GNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
G V+ A+ + Q +G +YN L+ RV +I +A E ++ E V P ++
Sbjct: 223 GRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGV-PQNI 281
Query: 195 STYTTMIRGYCKMGMIENAKKVF-DVMTVKP----NLLAYNTMINGFCKKGELEEAKKCM 249
T T++ G C+ G A + F + TV P N + Y+T++ + A +
Sbjct: 282 VTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELF 341
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+E M+ G P+ + Y MI GL GR+++A + + M+ GFK + + ++ G C
Sbjct: 342 HEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK 401
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ +A L+ + E + PDV +Y +++G CK G LL +M G +P+V +F
Sbjct: 402 KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF 461
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ + G++D A+ +L+ M + PN V YNT+I LC +G + +L D M
Sbjct: 462 GTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLC-KRGDVDLAIELFDEMK 520
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ T ++ LLKG ++ E ++ +M ++
Sbjct: 521 EKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREER 558
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 144/292 (49%), Gaps = 14/292 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI A+ GN+ A + +++EN + + N+++G L R A EFF +
Sbjct: 252 LIDAFCRVGNISMA---YELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE-- 306
Query: 186 KENVVPP---DVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
K V P + TY+T++ + A ++F + P+ + Y TMI+G +
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G LE+A + M G + + YN +I G C R+ EA L+ +M+ G + +V T+
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++L G C G F L +++ P V ++ +++G+CK+GK DEA+ +L+ M
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
G+ P +N + L + G++D AI L +M + N ++N ++ GL
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 165/312 (52%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y + L+ L + + A E F ++V P++ T T ++ GYC G ++ A+++F
Sbjct: 255 VYVFTVLIDGLCKNGMLVEAREMFDEMVNRGY-EPNIVTCTALMGGYCLKGNVDMARELF 313
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D + K ++ YN I+G+CK G + +A + +EM G PN +TYN++I LC
Sbjct: 314 DAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKA 373
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G V A ++ M +G ++ T +L GLC + DQA+ ++E+ + PDV SY
Sbjct: 374 GEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSY 433
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I+G C + EA++LL++M + L P + +++ + L +G + A LL +M
Sbjct: 434 TILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHV 493
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
LP+ ++Y+ ++ L K + + L ++MI+ G D Y+ ++ GYC+ ++
Sbjct: 494 KGPLPDTITYSILLDAL-WKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERID 552
Query: 455 NVMQIAHEMVTK 466
+ + EM K
Sbjct: 553 EAINLFREMHMK 564
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 156/309 (50%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y+ ++ L R + EF+++++ V P + TY ++IRG C +G + D M
Sbjct: 188 YSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEF-TYGSLIRGLCGVGKFLEGFGLVDEM 246
Query: 221 TVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ ++ + +I+G CK G L EA++ +EM+NRG PN +T A++ G C+ G V
Sbjct: 247 IRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNV 306
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A+ L + GFK +V T+ + G C VG+ AV + + P++ +Y +
Sbjct: 307 DMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSL 366
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ CK G+ A ++K M GL P + + + L ++ LD+AILL Q+ +
Sbjct: 367 IDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGL 426
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ SY +I G C ++ RM + +L+ M YSCL+ G C G + N
Sbjct: 427 TPDVWSYTILIHGCCTSR-RMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAW 485
Query: 458 QIAHEMVTK 466
++ +EM K
Sbjct: 486 RLLNEMHVK 494
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 146/316 (46%), Gaps = 13/316 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
+ N++L L + A EF +IV +VS Y +I G C+ G + A +
Sbjct: 109 ALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVS-YGILINGLCENGRVNEAVNLLRM 167
Query: 218 ---------DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
D VK N++ Y+ +I+ C+ G ++E + NEMM G PNE TY ++I
Sbjct: 168 IEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLI 227
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
GLC G+ E L+ +M G +V ++ GLC G +A ++
Sbjct: 228 RGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYE 287
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P++ + ++ G+C G D A L + G K V+++N + G + A+ +
Sbjct: 288 PNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRV 347
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+M + +PN V+YN++I LC A G + ++V M RSG D LL G C
Sbjct: 348 FDEMCREGVVPNIVTYNSLIDCLCKA-GEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLC 406
Query: 449 EEGNVENVMQIAHEMV 464
+ ++ + + +++V
Sbjct: 407 KSKRLDQAILLFNQLV 422
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 145/321 (45%), Gaps = 39/321 (12%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+ Y +GNV A F + +++YN + +V ++ A F ++ +
Sbjct: 294 TALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCR 353
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
E VVP ++ TY ++I CK G + A ++ M + P+++ +++G CK L+
Sbjct: 354 EGVVP-NIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLD 412
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A N+++ G P+ +Y +I+G C + R+ EA L+ M L ++ T+ ++
Sbjct: 413 QAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLI 472
Query: 304 KGLCVVGK-----------------------------------FDQAVGYLRNVMEANMN 328
GLC G+ D+AV +++ +
Sbjct: 473 DGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLE 532
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PDV Y ++I+G+CK + DEAI+L +EM + L P + ++ +F + ++G
Sbjct: 533 PDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKF 592
Query: 389 LKQMPQMDCLPNFVSYNTIIC 409
+ + ++ P + Y +C
Sbjct: 593 VNVIRDINPPPRVLKYLAALC 613
>gi|255660936|gb|ACU25637.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 484
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 214/432 (49%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHGSKKSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SY+ L V++R
Sbjct: 70 DMPKKGLEWDEDLWVL-MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDVLFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSRXITPDVIT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +T +I G RVD+A L +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLIKGYVSVDRVDDALRLXEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +++ + P D + +I+G CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQM--------PQM 395
D A +L+ M ++ +V + + +L+EN G+ D+AI LL ++ PQ
Sbjct: 308 DAAADVLQAM----IRLSVPTEAGHYGVLIENYCKAGQYDKAINLLDKLIEKDIILRPQS 363
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
++YN +I LC GR E LV ++++ G D + L+ G+ +EG+ ++
Sbjct: 364 TLHMEXIAYNPLIEYLC-NNGRTAKAETLVRQLMKLGVQ-DSIALNTLILGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ L AE Q++K V D T+I G+ + G ++A ++ +
Sbjct: 371 AYNPLIEYLCNNGRTAKAETLVRQLMKLGV--QDSIALNTLILGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M + AY++++ + KK E +AK ++ M+ G P+ + +++ L
Sbjct: 429 MLRRKIDSAKSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVMESL 483
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 170/326 (52%), Gaps = 14/326 (4%)
Query: 150 KQIENGAC--LYSYNSLL------GVLVRVNS-IKLAEEFFHQIVKENVVPPDVSTYTTM 200
K ++NG C L+++N + GVL NS + AE + H++V + + P D TY T+
Sbjct: 241 KVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDF-TYNTI 299
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I GY K+G I++A ++ K P+ Y ++I G C+ G+++ A E + +G
Sbjct: 300 IYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGL 359
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
+P+ + YN +I GL G V +A LM M G ++ T+ ++ GLC +G A
Sbjct: 360 KPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANN 419
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L + PD+ ++ +I+G+CK K D AI +L M + G+ P V ++N++ L
Sbjct: 420 LLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLC 479
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ + + + K + + CLPN ++YN +I LC A+ ++ + DL++ + G D
Sbjct: 480 KAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKAR-KVTEALDLLEEIRNRGLIPDP 538
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
+ ++ G+C G+++ Q+ M
Sbjct: 539 VSFGTVISGFCNNGDLDEAYQLFRRM 564
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 205/456 (44%), Gaps = 56/456 (12%)
Query: 58 VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN 117
V V+ Q +P AL FN + + HT Y + + L H +L
Sbjct: 10 VAAVLKYQKDPLKALSIFNSVKKED----GFKHTFLTYKRMIEKLGFHGEFDAMERVLME 65
Query: 118 -----SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
N L + ++ YG +G V+ A+ F + ++SYN+++ +LV
Sbjct: 66 MRLNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYG 125
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM------------------------- 207
A + + ++ E + PDV T+T I+ +C+
Sbjct: 126 YFNQAHKVYLRMKHEGIA-PDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVY 184
Query: 208 -----GMIE-----NAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
G E A ++F+ M + P++ +N +++ CKKG L+E +K +N+++
Sbjct: 185 CTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLK 244
Query: 255 RGCRPNELTYNAMIYGLC-------INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
G PN T+N I GLC N +V EA+ + KM G + + T+ +++ G
Sbjct: 245 NGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYS 304
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
VGK A L++ PD +Y +I G C+ G D A++L +E +GLKP++
Sbjct: 305 KVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIV 364
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+N + + L + G + +A+ L+ M + P+ +YN +I GLC G + D +L++
Sbjct: 365 LYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLC-KMGCVSDANNLLNA 423
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
I G+ D ++ L+ GYC+ ++N + I M
Sbjct: 424 AIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSM 459
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 171/314 (54%), Gaps = 12/314 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA-KKVFD 218
++N L+ +L + ++ E+ ++++K N V P++ T+ I+G C+ G++E A KV +
Sbjct: 218 TFNKLMHILCKKGHLQEGEKLLNKVLK-NGVCPNLFTFNIFIQGLCRKGVLEGANSKVVE 276
Query: 219 VMT---------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
++P+ YNT+I G+ K G++++A + + + +G P+E TY ++I
Sbjct: 277 AENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLII 336
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G+C +G +D A L + G K ++ + +++KGL G +A+ + ++ + M+P
Sbjct: 337 GVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSP 396
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
D+ +Y +VING CK+G +A +LL A+G P +F+FN + + ++D AI +L
Sbjct: 397 DIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGIL 456
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
M P+ ++YN+I+ GLC A + +DV + ++ G + Y+ L++ C+
Sbjct: 457 DSMWSHGVTPDVITYNSILNGLCKA-AKPEDVMETFKMIMEKGCLPNIITYNILIESLCK 515
Query: 450 EGNVENVMQIAHEM 463
V + + E+
Sbjct: 516 ARKVTEALDLLEEI 529
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 163/335 (48%), Gaps = 4/335 (1%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
DF + +I Y G ++ A AK ++Y SL+ + + I A F
Sbjct: 292 DDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALF 351
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCK 238
+ + + + P + Y T+I+G + G++ A ++ + M+ + P++ YN +ING CK
Sbjct: 352 EEALGKGL-KPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCK 410
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G + +A +N + +G P+ T+N +I G C ++D A ++ M +G +V T
Sbjct: 411 MGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVIT 470
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ S+L GLC K + + + +ME P++ +Y ++I CK K EA+ LL+E+R
Sbjct: 471 YNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIR 530
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
RGL P SF V NG+LD A L ++M Q + + V+ I+ K M
Sbjct: 531 NRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDM 590
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ L M G + D Y ++ G+C+ GNV
Sbjct: 591 DMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNV 625
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 170/352 (48%), Gaps = 7/352 (1%)
Query: 85 PNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIF 144
P+++ + + D + H+L +L K K S + LIK +G V A+
Sbjct: 326 PDEFTYCSLIIGVCQDGDIDHALALFEEALGKGL-KPSIVLYNTLIKGLSQQGLVLKALQ 384
Query: 145 WFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
+ + +++YN ++ L ++ + A + + + + PD+ T+ T+I GY
Sbjct: 385 LMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYL-PDIFTFNTLIDGY 443
Query: 205 CKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
CK ++NA + D M V P+++ YN+++NG CK + E+ + +M +GC PN
Sbjct: 444 CKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNI 503
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+TYN +I LC +V EA L+ ++R G + + +++ G C G D+A R
Sbjct: 504 ITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRR 563
Query: 322 V-MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ + + V +Y ++IN F + D A L EM +G P +++ + + G
Sbjct: 564 MEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVG 623
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
++ L + ++ +P+ ++ +I LC+ + R+ + +V M+R+G
Sbjct: 624 NVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCV-QHRVHEAVGIVHLMVRTG 674
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 8/188 (4%)
Query: 150 KQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
K I CL +YN L+ L + + A + +I ++P VS + T+I G+C
Sbjct: 492 KMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVS-FGTVISGFCN 550
Query: 207 MGMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
G ++ A ++F M + + YN MIN F +K +++ A+K +EM ++GC P+
Sbjct: 551 NGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSY 610
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
TY MI G C G V+ + K GF +++T ++ LCV + +AVG + +
Sbjct: 611 TYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLM 670
Query: 323 MEANMNPD 330
+ + P+
Sbjct: 671 VRTGVVPE 678
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 198/403 (49%), Gaps = 22/403 (5%)
Query: 67 NPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFI 126
+P L FF W+S P P + P A +H +S+ A L N L++ +
Sbjct: 100 HPKLLLDFFYWSS-PQLAP-----SAPAPDA-----FAHLAMSLCAGSLFN---LANGLL 145
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
K+I+AY V A+I H+A + L+ + ++ A E +++
Sbjct: 146 IKMIRAYPSPPVVLASI---HRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVV-LMMR 201
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + P + +++ + + KV + M + P++ Y+T+I +CK E +
Sbjct: 202 DRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFD 261
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
AKK + EM RGC N +TYN +I GLC +G V+EA M G + T+ +++
Sbjct: 262 TAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALI 321
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GLC + ++A L + A + P+V Y +I+GF + G +DEA ++KEM A G++
Sbjct: 322 NGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 381
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +++ + R L + G++DRA LLLKQM + P+ ++YN II G + +D
Sbjct: 382 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSK-KDAFR 440
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+ M +G + + YS ++ G C+ G E + EM TK
Sbjct: 441 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 483
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 198/399 (49%), Gaps = 18/399 (4%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI Y GNV A F + ++ LY YNSL+ L +V ++ + ++F Q
Sbjct: 490 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 549
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKG 240
+ + ++P + TY+ +I GY K G +E+A+++ M +KPN + Y ++ + K
Sbjct: 550 MQERGLLPNEF-TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSD 608
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++E+ M+++G + Y +I+ L +G ++ A +++ + NG +V +
Sbjct: 609 DIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYS 668
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S++ GLC ++A G L + + ++P++ Y +I+G CK G A ++ + A+
Sbjct: 669 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 728
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GL P ++ ++ + G++ A L +M P+ Y+ + G C + G ++
Sbjct: 729 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG-CSSAGDLEQ 787
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRV 480
L++ M GH + ++ L+ G+C+ G ++ +++ H ++ GR L V
Sbjct: 788 AMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKMQETLKLLHVIM---GRGL--------V 835
Query: 481 VDALLLMWIVTGGSWISRFVFVHQVVV-IMERTVEDGKR 518
+AL + I++G S + VH + V + ++T E R
Sbjct: 836 PNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 874
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 146/289 (50%), Gaps = 8/289 (2%)
Query: 177 AEEFFHQIVKENV---VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYN 230
A+E F +++KE V V P+ TY ++RG CKMG ++ A + M + +P+ + YN
Sbjct: 365 ADEAF-KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 423
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+I G + ++A + ++EM N G PN TY+ MI+GLC +G ++A L+ +M
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 483
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G K N + ++ G C G A + + N+ PD+ Y +I G K+G+ +E+
Sbjct: 484 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 543
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+M+ RGL P F+++ + ++NG+L+ A L+++M PN V Y ++
Sbjct: 544 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 603
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
++ V M+ G LD +Y L+ GN+E ++
Sbjct: 604 Y-FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRV 651
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 160/344 (46%), Gaps = 30/344 (8%)
Query: 113 SLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE-NGAC--LYSYNSLLGVLV 169
S+L L + LI GN++AA F IE NG+ ++ Y+SL+ L
Sbjct: 619 SMLDQGVMLDNRIYGILIHNLSSSGNMEAA---FRVLSGIEKNGSVPDVHVYSSLISGLC 675
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNL 226
+ + A ++ K+ V P++ Y +I G CK G I A+ VF+ + K PN
Sbjct: 676 KTADREKAFGILDEMSKKGV-DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 734
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
+ Y ++I+G CK G++ A NEM+ G P+ Y+ + G G +++A L+ +
Sbjct: 735 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 794
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M L G ++S+ +++ G C GK + + L +M + P+ + E +I+G + GK
Sbjct: 795 MFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGK 853
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE------------------LDRAILL 388
E ++ E++ + + F+++F ++ G+ LD+A++L
Sbjct: 854 LSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALML 913
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ SY I+ LC KG++ + +L+ M + G
Sbjct: 914 RDVIVAKSAPMGCSSYLAIVDNLCR-KGKLSEALNLLKEMDKRG 956
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 58/261 (22%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ L + I A F+ I+ + +VP + TYT++I G CK+G I NA +++ M
Sbjct: 702 YNALIDGLCKSGDISYARNVFNSILAKGLVP-NCVTYTSLIDGSCKVGDISNAFYLYNEM 760
Query: 221 ---TVKPNLLAY----------------------------------NTMINGFCKKGELE 243
+ P+ Y N +++GFCK+G+++
Sbjct: 761 LATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQ 820
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR--------------- 288
E K ++ +M RG PN LT +I GL G++ E + +++
Sbjct: 821 ETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLF 880
Query: 289 ---LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKI 344
+N K + M++ C G D+A+ LR+V+ A P SY +++ C+
Sbjct: 881 MDMINQGKIPLDVVDDMIRDHCKEGNLDKAL-MLRDVIVAKSAPMGCSSYLAIVDNLCRK 939
Query: 345 GKSDEAISLLKEMRARGLKPT 365
GK EA++LLKEM RG+ P+
Sbjct: 940 GKLSEALNLLKEMDKRGICPS 960
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 9/244 (3%)
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+ +++ + K G +++A + + M +RG P+ NA++ L R D A L+ K+R
Sbjct: 178 DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLL---RAD-AMALLWKVRE 233
Query: 290 ----NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
G +V T+ ++++ C V +FD A L + E + +Y V+I G C+ G
Sbjct: 234 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 293
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+EA K+M GL P F++ A+ L ++ + A LL +M + PN V Y
Sbjct: 294 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 353
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+I G M +G + ++ M+ +G + Y L++G C+ G ++ + +MV
Sbjct: 354 NLIDGF-MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVR 412
Query: 466 KKGR 469
R
Sbjct: 413 DSHR 416
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 200/407 (49%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L + ++ A +L++ +
Sbjct: 3 SPTNSTFRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQ 62
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + K+ + + +L L+++ KL
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ + + E P + + ++ + K G I A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYEESL-ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+L+E + N M G +P+ TY+ +I GLC ++D+A L +M G N
Sbjct: 182 IKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GL P ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC-QEG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R D E ++ M+ G + Y+ ++ +C++G+V ++ EM
Sbjct: 361 RSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 150/300 (50%), Gaps = 39/300 (13%)
Query: 143 IFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP--------- 191
+ W + +E G A LY +N L+ V+ I+LA+ F I K ++ P
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLM 178
Query: 192 -------------------------PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
PDV TY+ +I G CK +++A +FD M K
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLV 238
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN + + T+I+G CK G ++ A + +M+++ P+ +TYN +IYGLC G + +A+ L
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +M + G + T+ +++ G C G + A Y + +++ N+ D +Y +I+G C+
Sbjct: 299 IDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQ 358
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+S +A +L+EM GLKP + ++ + + G++ LLK+M + +P+ V+
Sbjct: 359 EGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 135/240 (56%), Gaps = 1/240 (0%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+ + P++++YNT+ING CK+ LE+A + EM C PN TY ++ GLC GRV+E
Sbjct: 4 INILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEE 63
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L+ +M+ G + +V + +++ G C G D+ ++E ++P+V Y +IN
Sbjct: 64 AMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLIN 123
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
GFCK G EA ++L M RG++P V+++ + L ++G +A+ L M + P
Sbjct: 124 GFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEP 183
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ V+YN +I GLC +G + D + + M+ G L+ Y+ L+ G C G ++ M++
Sbjct: 184 STVTYNVLINGLC-KEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKL 242
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 146/282 (51%), Gaps = 6/282 (2%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAK 246
+ PD+ +Y T+I G CK +E A + M + +PN Y +++G CK+G +EEA
Sbjct: 6 ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + EM +G + + Y+ +I G C G +D K L +M G NV + ++ G
Sbjct: 66 RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGF 125
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G + +A L + E + PDV +Y +I G CK G++ +A+ L M +G +P+
Sbjct: 126 CKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPST 185
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++N + L + G + A + + M + VSYNT+I GLC G++ + L
Sbjct: 186 VTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLC-NNGKLDEAMKLFS 244
Query: 427 RMIRSGHNL--DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ G+ + D ++ +++G C+EG ++ ++I M+ +
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIER 286
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 158/307 (51%), Gaps = 7/307 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ SYN+++ L + ++ A + ++ + + P+ TY ++ G CK G +E A ++
Sbjct: 10 IVSYNTIINGLCKEKRLEKAVDLLVEM-EGSSCEPNSFTYCILMDGLCKEGRVEEAMRLL 68
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K +++ Y+T+I+GFC KG L+ K +EM+ +G PN + Y+ +I G C
Sbjct: 69 GEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKK 128
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G EA ++ M G + +V T+ M+ GLC G+ +A+ + E P +Y
Sbjct: 129 GLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTY 188
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+ING CK G +A + + M +G + V S+N + L NG+LD A+ L + +
Sbjct: 189 NVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLE 248
Query: 395 MD--CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
P+ +++NT+I GLC +GR+ ++ D MI G + L+ Y + G
Sbjct: 249 DGNYVEPDVITFNTVIQGLC-KEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307
Query: 453 VENVMQI 459
++ M++
Sbjct: 308 IDKAMEL 314
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 179/379 (47%), Gaps = 21/379 (5%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G + A+ F + +YN L+ L + I A + F ++ E +V +
Sbjct: 164 GRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETML-EKGKRLEVVS 222
Query: 197 YTTMIRGYCKMGMIENAKKVF-----DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
Y T+I G C G ++ A K+F D V+P+++ +NT+I G CK+G L++A + +
Sbjct: 223 YNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDT 282
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ RG N T + +I +G +D+A L ++ G + +T+ M+ G C +
Sbjct: 283 MIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHM 342
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
+ A G + + ++P + Y ++ CK ++A L +EM+ +P SFN
Sbjct: 343 LNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNI 402
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ ++ G++ A LL M QM P+ +Y++ I L G+M++ + D MI S
Sbjct: 403 MIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKL-GQMEEAKGAFDSMIAS 461
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLK------NFLTRVVDALL 485
G D +Y L+KG+ +E V+ + +M G +L L+ FL + L
Sbjct: 462 GITPDNHVYDSLIKGFGLNDEIEEVINLLRQMA-DMGVILDLEITNSILTFLCNSAEHLH 520
Query: 486 LMWIV-------TGGSWIS 497
+M ++ +GG+ IS
Sbjct: 521 VMELLPNFSSESSGGTSIS 539
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
N+ PD+ SY +ING CK + ++A+ LL EM +P F++ + L + G ++ A
Sbjct: 5 NILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEA 64
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ LL +M + + V Y+T+I G C +KG + + L D M+ G + + +YSCL+
Sbjct: 65 MRLLGEMKRKGLEVDVVVYSTLISGFC-SKGCLDRGKALFDEMLEKGISPNVVVYSCLIN 123
Query: 446 GYCEEGNVENVMQIAHEMVTKKG 468
G+C++G + H M T++G
Sbjct: 124 GFCKKGLWREATAVLHTM-TERG 145
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M+ + P + S+N + L + L++A+ LL +M C PN +Y ++ GLC +G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLC-KEG 59
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R+++ L+ M R G +D +YS L+ G+C +G ++ + EM+ K
Sbjct: 60 RVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEK 109
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 214/429 (49%), Gaps = 33/429 (7%)
Query: 65 QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDF 124
+ P AL FF WA + + Y+ I D+L + L+ A +++
Sbjct: 58 RNRPVVALRFFRWAERQT----GFKRSEISYSVILDILARNGLMRSAYCVME-------- 105
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
K++ + G + + ++ + + LL + V+ + ++ F+++
Sbjct: 106 ---KVVSVKMENGVIDVV-----SSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKM 157
Query: 185 VKENVVPPDVSTYTTMIRGYC-KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
V + ++P DV ++R + I+ A++V++VM + P ++ YNTM++ FCKKG
Sbjct: 158 VSKGLLP-DVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKG 216
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++EA + + +M GC PN++TYN ++ GL +G +++AK L+ M G + +V T+
Sbjct: 217 MVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYD 276
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++G C G+ ++A ++ P V +Y ++ G CK G+ +A LL M +
Sbjct: 277 PLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNK 336
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
L P + S+N + G + A LL ++ P+ V+YNT+I GLC R+ D
Sbjct: 337 NLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLC----RLGD 392
Query: 421 VE---DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFL 477
++ L D MI+ G + D ++ ++G+C+ GN+ ++ EM+ + + + ++
Sbjct: 393 LDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFA-YI 451
Query: 478 TRVVDALLL 486
TR+V L L
Sbjct: 452 TRIVGELKL 460
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 169/371 (45%), Gaps = 9/371 (2%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLKNSNKL----SDFFISKLIKAYGDRGNVKAAIFWF 146
T Y + D ++ A LL + +D + L+ G ++ A
Sbjct: 201 TVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELI 260
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
++ +Y+Y+ L+ I+ A +++ VP V TY T++ G CK
Sbjct: 261 QDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPT-VVTYNTIMYGLCK 319
Query: 207 MGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G + +A+K+ DVM K P+L++YNT+I G+ + G + EA E+ R P+ +T
Sbjct: 320 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVT 379
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YN +I GLC G +D A L +M +G +V T + ++G C +G A ++
Sbjct: 380 YNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEML 439
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ PD +Y I G K+G +A + +EM ARG P + ++N L + G L
Sbjct: 440 NRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLK 499
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A L+K+M +P+ V+Y +II MA G ++ L M+ G Y+ L
Sbjct: 500 EASELVKKMLYNGLVPDHVTYTSIIHAHLMA-GHLRKARALFLEMLSKGIFPSVVTYTVL 558
Query: 444 LKGYCEEGNVE 454
+ Y G ++
Sbjct: 559 IHSYAVRGRLK 569
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 164/360 (45%), Gaps = 43/360 (11%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLK---NSNKLSDFF-ISKLIKAYGDRGNVKAAIFWF 146
T Y I L +S A LL N N + D + LI Y GN+ A F
Sbjct: 306 TVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLF 365
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ + + +YN+L+ L R+ + +A +++K PDV T+TT +RG+CK
Sbjct: 366 AELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGP-DPDVFTFTTFVRGFCK 424
Query: 207 MGMIENAKKVFDVMTVK--------------------------------------PNLLA 228
MG + AK++FD M + P+L+
Sbjct: 425 MGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT 484
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YN I+G K G L+EA + + +M+ G P+ +TY ++I+ + G + +A+ L +M
Sbjct: 485 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEML 544
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G +V T+ ++ V G+ A+ + + E ++P+V +Y +ING CK+ K D
Sbjct: 545 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 604
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A + EM+A+G+ P +++ + G A+ L K M + P+ ++ +++
Sbjct: 605 QAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLL 664
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 155/313 (49%), Gaps = 5/313 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L SYN+L+ R+ +I A F ++ + + P V TY T+I G C++G ++ A ++
Sbjct: 342 LVSYNTLIYGYTRLGNIGEAFLLFAEL-RYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLK 400
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M P++ + T + GFCK G L AK+ +EM+NRG +P+ Y I G
Sbjct: 401 DEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 460
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +A + +M GF ++ T+ + GL +G +A ++ ++ + PD +Y
Sbjct: 461 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 520
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+ G +A +L EM ++G+ P+V ++ + G L AIL +M +
Sbjct: 521 TSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 580
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN ++YN +I GLC + +M + M G + + Y+ L+ C G+ +
Sbjct: 581 KGVHPNVITYNALINGLCKVR-KMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQ 639
Query: 455 NVMQIAHEMVTKK 467
+++ +M+ ++
Sbjct: 640 EALRLYKDMLDRE 652
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 19/177 (10%)
Query: 88 YHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISK-----------LIKAYGDR 136
Y+ P + T ++ +H + A L+ + L +SK LI +Y R
Sbjct: 510 YNGLVPDHVTYTSIIHAH----LMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVR 565
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G +K AI F + + + +YN+L+ L +V + A FF ++ + + P+ T
Sbjct: 566 GRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKG-ISPNKYT 624
Query: 197 YTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
YT +I C +G + A +++ M ++P+ + +++ K +L + N
Sbjct: 625 YTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHLEN 681
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 209/454 (46%), Gaps = 38/454 (8%)
Query: 21 VTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASN 80
V + S R+ NP+P I +F L S + K + ++ L F +
Sbjct: 52 VDDLVSSFHRMLLLNPAPSVI------EFGKILSSLVKLKHYPTVISLFYQLEF----NG 101
Query: 81 PNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVK 140
PN CY + + + SI A +LK + ++ L+K + VK
Sbjct: 102 IKPNIVSLSILINCYCHLGQMRFA---FSIFAKILKMGYHPNTITLTTLVKGFCLNHKVK 158
Query: 141 AAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
A+ + + SY +L+ L ++ + A + QI + +V DV Y+T+
Sbjct: 159 EALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQI-EGKLVSTDVVMYSTI 217
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I G CK ++ +A +++ M K P ++ N++I G+C G+ +EA + EM+ +
Sbjct: 218 IDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNI 277
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF----- 312
P+ T+N ++ LC G++ EAK +A M G +V T+ S++ G C+V +
Sbjct: 278 NPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKH 337
Query: 313 ---------------DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
D+A+ + + PD +Y +I+G CK G+ A L+ EM
Sbjct: 338 VYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEM 397
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
R G + ++N++ L +N +D+AI L+K++ + +YN +I GLC +GR
Sbjct: 398 RDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLC-KQGR 456
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
++D + + ++ G+NL Y+ ++ G C EG
Sbjct: 457 LKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEG 490
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 171/342 (50%), Gaps = 18/342 (5%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSDFFIS--KLIKAYGDRGNVKAAIFWFHQAK 150
Y+ I D L L++ A L + ++S ++ LI Y G K A +
Sbjct: 214 YSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMV 273
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+Y++N L+ L + IK A+ ++KE V+P DV TY++++ GYC + +
Sbjct: 274 LKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMP-DVVTYSSLMDGYCLVNEV 332
Query: 211 ENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
AK V Y+ +INGFCK +++A EM R P+ +TYN++I G
Sbjct: 333 NKAKHV------------YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDG 380
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC +GR+ A L+ +MR +G ++ T+ S++ LC D+A+ ++ + + + D
Sbjct: 381 LCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLD 440
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ +Y ++I+G CK G+ +A + +++ +G TV+++ + L G L+ A LL
Sbjct: 441 MYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLS 500
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+M C+P+ V+ TII L + + E L+ MI G
Sbjct: 501 KMEDNGCVPDAVTCETIIRAL-FENDKNERAEKLLREMIARG 541
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 174/377 (46%), Gaps = 62/377 (16%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
FH+ + + + +L LV++ F+Q+ + N + P++ + + +I YC
Sbjct: 59 FHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQL-EFNGIKPNIVSLSILINCYC 117
Query: 206 KMGMIENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
+G + A +F M PN + T++ GFC +++EA + ++ G N++
Sbjct: 118 HLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQV 177
Query: 263 TYNAMIYGLC--------------INGR---------------------VDEAKMLMAKM 287
+Y +I GLC I G+ V++A L ++M
Sbjct: 178 SYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEM 237
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
V T S++ G C+VG+F +A G LR ++ N+NPDV ++ ++++ CK GK
Sbjct: 238 ITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKI 297
Query: 348 DEAISLLKEMRARGLKPTVFSFNA----------------VFRILVENG-----ELDRAI 386
EA S + M G+ P V ++++ V+ I++ NG +D+A+
Sbjct: 298 KEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVI-NGFCKIKMVDKAL 356
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L +M P+ V+YN++I GLC + GR+ +LVD M SG D Y+ L+
Sbjct: 357 SLFYEMRCRRIAPDTVTYNSLIDGLCKS-GRISYAWELVDEMRDSGQPADIITYNSLIDA 415
Query: 447 YCEEGNVENVMQIAHEM 463
C+ +V+ + + ++
Sbjct: 416 LCKNHHVDKAIALVKKI 432
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 36/243 (14%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ + +++ K ++ G +PN ++ + +I C G++ A +
Sbjct: 69 PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
AK+ G+ N T +++KG C+ K +A+ + +V+ + + SY +ING CK
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
IG++ A+ +L+++ + + V V
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDV-----------------------------------VM 213
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+TII GLC K + D +L MI + + L+ GYC G + + EM
Sbjct: 214 YSTIIDGLCKDK-LVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREM 272
Query: 464 VTK 466
V K
Sbjct: 273 VLK 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P++ S ++IN +C +G+ A S+ ++ G P + + + N ++ A+
Sbjct: 102 IKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEAL 161
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCM---AKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+ + N VSY T+I GLC + +Q + + +++ + D MYS +
Sbjct: 162 HFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVST----DVVMYSTI 217
Query: 444 LKGYCEEGNVENVMQIAHEMVTKK 467
+ G C++ V + ++ EM+TK+
Sbjct: 218 IDGLCKDKLVNDAYELYSEMITKR 241
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D V ++ N P V + +++ K+ ISL ++ G+KP + S + +
Sbjct: 53 DDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSIL 112
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
G++ A + ++ +M PN ++ T++ G C+ ++++ D ++ G
Sbjct: 113 INCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCL-NHKVKEALHFHDHVLALG 171
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + Y L+ G C+ G +Q+ ++ K
Sbjct: 172 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGK 205
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 188/398 (47%), Gaps = 14/398 (3%)
Query: 95 YTAITDVLLSHSLISIAAS----LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT + D L L A ++ N K ++ + LI Y G K + +
Sbjct: 210 YTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMS 269
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
Y+Y SLL L ++ + F ++ EN + PD + Y K GMI
Sbjct: 270 ARGLKPDCYTYGSLLNYLCALSEM----HSFLDLMVENGLSPDHHIFNIFFSAYAKCGMI 325
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A +F+ M + PN++ Y +I+ CK G +++A+ N+M+N G PN + +N++
Sbjct: 326 DKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSL 385
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+YGLC + + A+ L+ +M G N +++ LC VG+ + + + +
Sbjct: 386 VYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGV 445
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD SY +I+G+C G++DEA + M + GL PT ++N + +D A
Sbjct: 446 RPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYC 505
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L ++M + P V+YNTI+ GL K R + ++L MI SG D Y+ +L G
Sbjct: 506 LFREMLRKGVTPGVVTYNTILHGLFQTK-RFSEAKELYLNMINSGTKCDIYTYNIILNGL 564
Query: 448 CEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALL 485
C+ V+ ++ + + KG L + F T ++ ALL
Sbjct: 565 CKSNCVDEAFKMFQSLCS-KGLQLNIITF-TIMIGALL 600
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 184/372 (49%), Gaps = 17/372 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI A G V A F+Q I G + +NSL+ L V+ + AEE ++++
Sbjct: 350 LIDALCKLGRVDDAEVKFNQ--MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLD 407
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + P V + T+I C +G + +++ D+M V+P+ +Y +I+G+C G +
Sbjct: 408 QGICPNAV-FFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTD 466
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+K + M++ G P E+TYN +++G C R+D+A L +M G V T+ ++L
Sbjct: 467 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 526
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GL +F +A N++ + D+ +Y +++NG CK DEA + + + ++GL+
Sbjct: 527 HGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQ 586
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+ +F + L++ G + A+ L +P +PN V+Y + L + +G +++ +
Sbjct: 587 LNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENL-IEEGSLEEFDS 645
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDA 483
L M ++G + M + L++ G++ A ++K L +NF
Sbjct: 646 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISR----AGAYLSK----LDERNFSVEASTT 697
Query: 484 LLLMWIVTGGSW 495
LL+ I T +
Sbjct: 698 SLLISIFTSDEY 709
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 155/342 (45%), Gaps = 39/342 (11%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
N LL L + A + Q + E PD +Y+ +++G+C E A ++ +M
Sbjct: 137 NQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMA 196
Query: 221 -----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ PN++ Y T+I+G CK + A+ +M++ G +PN TYN +I+G G
Sbjct: 197 NDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIG 256
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV-------------------------- 309
+ E ++ KM G K + T+ S+L LC +
Sbjct: 257 KWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFF 316
Query: 310 ------GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G D+A+ + + ++P+V +Y +I+ CK+G+ D+A +M G+
Sbjct: 317 SAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT 376
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P + FN++ L + +RA L+ +M PN V +NT+IC LC GR+ +
Sbjct: 377 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNV-GRVMEGRR 435
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
L+D M G D Y+ L+ GYC G + ++ MV+
Sbjct: 436 LIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVS 477
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 162/332 (48%), Gaps = 42/332 (12%)
Query: 176 LAEEFFHQIVKENV--VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYN 230
L F+++V+E V P+ TY+ +I C+MG ++++ F ++ + N + N
Sbjct: 78 LVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVIN 137
Query: 231 TMINGFCKKGELEEAKKCMNEMMNR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
++ G C + EA + + M GC P+ ++Y+ ++ G C R +EA L+ M
Sbjct: 138 QLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAN 197
Query: 290 NGFKD---NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
+ + NV T+ +++ GLC FD+A G + +++ + P+ +Y +I+G+ IGK
Sbjct: 198 DHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGK 257
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFR-------------ILVEN-------------- 379
E + +L++M ARGLKP +++ ++ ++VEN
Sbjct: 258 WKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFS 317
Query: 380 -----GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
G +D+A+ + +M Q PN V+Y +I LC GR+ D E ++MI G
Sbjct: 318 AYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKL-GRVDDAEVKFNQMINEGVT 376
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +++ L+ G C E ++ +EM+ +
Sbjct: 377 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ 408
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%)
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P +++ + L G L + + + N + N ++ GLC K + +
Sbjct: 94 VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+ L+ RM G D YS LLKG+C E E +++ M GR
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGR 201
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 163/315 (51%), Gaps = 8/315 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+ ++ L + + A E F + E+ VP V TY +I C G A +F
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLV-TYNVLINSRCNAGEFGKALDLFQS 70
Query: 220 MT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M V+P+ YNT+I+G C G E A+K ++EM ++ N TY+++I L
Sbjct: 71 MKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEA 130
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ +E+ ++ +M G +V +++G ++A ++++E+ PD SY
Sbjct: 131 KPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYH 190
Query: 336 VVINGFCKIGKSDEAISLLKE--MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
++I+G KIGK DE++ +L E MRA G P V +F+ + L GEL++A+ + M
Sbjct: 191 ILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 250
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ C PN +Y T+I GLC A+ +Q +L ++M ++ D Y+ L+ GYC+ G++
Sbjct: 251 EAGCKPNKYTYTTLIAGLCRAEKVIQ-ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSM 309
Query: 454 ENVMQIAHEMVTKKG 468
+ ++ EM G
Sbjct: 310 DEAEKLYREMSGGAG 324
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 175/352 (49%), Gaps = 15/352 (4%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
DF + L KA G + A+ F K L +YN L+ A + F
Sbjct: 14 DFVVQSLAKA----GMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQ 69
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKK 239
+ +E V PD TY T+I G C G E A+K+ M + N+ Y+++I K+
Sbjct: 70 SMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKE 129
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK-DNVST 298
+ EE+ K + EMM GC P+ +N ++ G + +++A+ + M +G+K DNVS
Sbjct: 130 AKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSY 189
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVM--EANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
H ++ GL +GK D+++ L + A P+V ++ +I+G C+ G+ ++A+ +
Sbjct: 190 H-ILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGS 248
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M G KP +++ + L ++ +A L ++M Q P+ V+YN++I G C +G
Sbjct: 249 MLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYC-KRG 307
Query: 417 RMQDVEDLVDRMIRSGHNLDFTM--YSCLLKGYCEEGNVENVMQIAHEMVTK 466
M + E L R + G L T+ ++ L+ G+C+ G + ++ EM TK
Sbjct: 308 SMDEAEKLY-REMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 358
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 158/308 (51%), Gaps = 8/308 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++N ++ R N+++ A E + +V+ P +VS Y +I G K+G ++ + K+
Sbjct: 151 VFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVS-YHILIHGLAKIGKLDESLKIL 209
Query: 218 DVMTVK-----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
M ++ PN++ ++T+I+G C+ GELE+A + M+ GC+PN+ TY +I GLC
Sbjct: 210 SEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLC 269
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME-ANMNPDV 331
+V +A+ L KM + + S++ G C G D+A R + A + P +
Sbjct: 270 RAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTI 329
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
++ +I+GFCK+GK A L+ EM +GL ++ + L +LD A+ + KQ
Sbjct: 330 VTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQ 389
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + L + VS + + GLC G + + + +SG + + L + + G
Sbjct: 390 MREKKFLLDPVSCVSFVGGLCKT-GNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 448
Query: 452 NVENVMQI 459
VE+ ++
Sbjct: 449 RVEDAQKL 456
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 127/241 (52%), Gaps = 5/241 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ L R ++ A E F ++ E P+ TYTT+I G C+ + A+++F+
Sbjct: 225 TFSTLIHGLCRTGELEKALEVFGSML-EAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN-RGCRPNELTYNAMIYGLCING 275
MT + P+ +AYN++I G+CK+G ++EA+K EM G +P +T+N +I G C G
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 343
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++ A L+A+M G + T++ ++ GL K D+A+ + + E D S
Sbjct: 344 KLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 403
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+ G CK G D+A ++ + R G P +F + L++ G ++ A L++
Sbjct: 404 SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 463
Query: 396 D 396
D
Sbjct: 464 D 464
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 112/206 (54%), Gaps = 5/206 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+Y +L+ L R + A E F ++ + +PPD Y ++I GYCK G ++ A+K++
Sbjct: 259 YTYTTLIAGLCRAEKVIQARELFEKMT-QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYR 317
Query: 219 VMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M+ ++P ++ +NT+I+GFCK G+L A + + EM +G + TY +I GL
Sbjct: 318 EMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRA 377
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
++DEA + +MR F + + S + GLC G DQA ++ P+ +++
Sbjct: 378 TKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETF 437
Query: 335 EVVINGFCKIGKSDEAISLLKEMRAR 360
++ K+G+ ++A L++ +AR
Sbjct: 438 RILSESLIKLGRVEDAQKLMEPAKAR 463
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 186/409 (45%), Gaps = 43/409 (10%)
Query: 96 TAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG 155
+ ++ V + +SL+S ++ N + + D I ++A R +A + +
Sbjct: 133 SGVSRVEIVNSLVSTYSNCGSN-DSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSID 191
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQI------------------------------- 184
AC N+L+G LVR+ ++LA + +I
Sbjct: 192 AC----NALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTF 247
Query: 185 ---VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
V+E V PD+ TY T+I Y G++E A ++ M K P + YNT+ING CK
Sbjct: 248 LSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCK 307
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G+ E AK+ EM+ G P+ TY +++ C G E + + + MR ++
Sbjct: 308 HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVC 367
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
SM+ G D+A+ Y +V EA + PD Y ++I G+C+ G EA++L EM
Sbjct: 368 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEML 427
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+G V ++N + L + L A L +M + P+ + +I G C G +
Sbjct: 428 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKL-GNL 486
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
Q+ +L +M LD Y+ LL G+ + G+++ +I +MV+K+
Sbjct: 487 QNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 166/349 (47%), Gaps = 42/349 (12%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++S++ + R ++ A +F+ VKE + PD YT +I+GYC+ GMI A +
Sbjct: 365 LVCFSSMMSLFTRSGNLDKALMYFNS-VKEAGLIPDNVIYTILIQGYCRKGMISEAMNLR 423
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + +++ YNT+++G CK+ L EA K NEM RG P+ T +I G C
Sbjct: 424 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKL 483
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + A L KM+ K +V T+ ++L G VG D A +++ + P S+
Sbjct: 484 GNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISF 543
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTV---------------------------- 366
+++N C G EA + EM ++ +KPTV
Sbjct: 544 SILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMIS 603
Query: 367 -------FSFNAVFRILVENGELDRAILLLKQMP--QMDCLPNFVSYNTIICGLCMAKGR 417
S+N + V+ + +A L+K+M Q +P+ +YN+I+ G C + +
Sbjct: 604 EGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFC-RENQ 662
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M++ E ++ +MI G N D + Y+ L+ G+ + N+ + EM+ +
Sbjct: 663 MKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQR 711
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 173/381 (45%), Gaps = 40/381 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY +G ++ A H +Y+YN+++ L + + A+E F ++++
Sbjct: 266 LISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 325
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTM------------- 232
+ PD +TY +++ CK G + +F M V P+L+ +++M
Sbjct: 326 L-SPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 384
Query: 233 ----------------------INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
I G+C+KG + EA NEM+ +GC + +TYN +++G
Sbjct: 385 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHG 444
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC + EA L +M G + T ++ G C +G A+ + + E + D
Sbjct: 445 LCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLD 504
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V +Y +++GF K+G D A + +M ++ + PT SF+ + L G L A +
Sbjct: 505 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWD 564
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M P + N++I G C + G D E +++MI G D Y+ L+ G+ +E
Sbjct: 565 EMISKSIKPTVMICNSMIKGYCRS-GNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKE 623
Query: 451 GNVENVMQIAHEMVTKKGRLL 471
N+ + +M K+G L+
Sbjct: 624 ENMSKAFGLVKKMEEKQGGLV 644
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 128/246 (52%), Gaps = 6/246 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ ++ LI + GN++ A+ F + K+ + +YN+LL +V I A+E +
Sbjct: 471 YTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWAD 530
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKG 240
+V + ++P +S ++ ++ C G + A +V+D M ++KP ++ N+MI G+C+ G
Sbjct: 531 MVSKEILPTPIS-FSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSG 589
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM--RLNGFKDNVST 298
+ + + +M++ G P+ ++YN +IYG + +A L+ KM + G +V T
Sbjct: 590 NASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFT 649
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ S+L G C + +A LR ++E +NPD +Y +INGF EA EM
Sbjct: 650 YNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEML 709
Query: 359 ARGLKP 364
RG P
Sbjct: 710 QRGFSP 715
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 130/247 (52%), Gaps = 6/247 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+ L+ ++ +++ A E F ++ KE + DV TY T++ G+ K+G I+ AK+++
Sbjct: 471 YTLTILIDGHCKLGNLQNAMELFKKM-KEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWA 529
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P ++++ ++N C KG L EA + +EM+++ +P + N+MI G C +G
Sbjct: 530 DMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSG 589
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME--ANMNPDVKS 333
+ ++ + KM GF + ++ +++ G +A G ++ + E + PDV +
Sbjct: 590 NASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFT 649
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +++GFC+ + EA ++L++M RG+ P ++ ++ V L A +M
Sbjct: 650 YNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEML 709
Query: 394 QMDCLPN 400
Q P+
Sbjct: 710 QRGFSPD 716
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 150/277 (54%), Gaps = 6/277 (2%)
Query: 137 GNVKAAIFWFHQAKQI--ENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
G AA+ +F + + + E +Y++L+G L+ N++ +A E FH+ + E PD
Sbjct: 295 GRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH-SPDA 353
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
Y TMI G + G +E+A + M K + AYN +I GFC+K L EA + + E
Sbjct: 354 IMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQE 413
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M G RP+ TYN ++ G C G L+ KM +G + +V T +++ G C VGK
Sbjct: 414 MKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGK 473
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+A+ LR++ E+ ++P+ Y +I+ CK G D AI L EM+ + + V +FNA
Sbjct: 474 IDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNA 533
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+ + L + ++A L+ QM + C P++V+ + ++
Sbjct: 534 LLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLM 570
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 162/350 (46%), Gaps = 45/350 (12%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++NS+L L RV + + + V PDV TY ++ G CK G + +A +V
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 218 DVMT-----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN--RGCRPNELTYNAMIYG 270
D M+ ++P+++ NT+++G CK G ++EA + + M+ GC PN +TYN +I
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR---------- 320
C G + A L+ KM G N+ T +++ GLC G+ A+ + R
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGK 315
Query: 321 -----------------NV----------MEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
NV M +PD Y +I+G + G+ ++A S+
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSM 375
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
M+ G K ++N + L A LL++M ++ P+ +YNT++ G C
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK 435
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
A G V++L+ +MI G + L+ GYC+ G ++ ++I M
Sbjct: 436 A-GDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSM 484
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 163/338 (48%), Gaps = 9/338 (2%)
Query: 137 GNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
G V+ A+ + Q +G +YN L+ RV +I +A E ++ E V P ++
Sbjct: 223 GRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGV-PQNI 281
Query: 195 STYTTMIRGYCKMGMIENAKKVF-DVMTVKP----NLLAYNTMINGFCKKGELEEAKKCM 249
T T++ G C+ G A + F + TV P N + Y+T++ + A +
Sbjct: 282 VTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELF 341
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+E M+ G P+ + Y MI GL GR+++A + + M+ GFK + + ++ G C
Sbjct: 342 HEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK 401
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ +A L+ + E + PDV +Y +++G CK G LL +M G +P+V +F
Sbjct: 402 KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF 461
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ + G++D A+ +L+ M + PN V YNT+I LC +G + +L D M
Sbjct: 462 GTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLC-KRGDVDLAIELFDEMK 520
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ T ++ LLKG ++ E ++ +M ++
Sbjct: 521 EKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREER 558
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 144/292 (49%), Gaps = 14/292 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI A+ GN+ A + +++EN + + N+++G L R A EFF +
Sbjct: 252 LIDAFCRVGNISMA---YELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE-- 306
Query: 186 KENVVPP---DVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
K V P + TY+T++ + A ++F + P+ + Y TMI+G +
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G LE+A + M G + + YN +I G C R+ EA L+ +M+ G + +V T+
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++L G C G F L +++ P V ++ +++G+CK+GK DEA+ +L+ M
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
G+ P +N + L + G++D AI L +M + N ++N ++ GL
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 147/277 (53%), Gaps = 4/277 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCM 249
DV + T++ G C+ G + A+ + D M +PN + Y T++NG CK G+ + A +
Sbjct: 9 DVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLL 68
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M + + + Y A+I LC +G +A+ L +M G NV T+ M+ G C
Sbjct: 69 RKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSY 128
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
GK+ A LR+++E+N++PDV ++ +IN F K GK EA L +EM R + P ++
Sbjct: 129 GKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITY 188
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N++ ++ LD A + M PN ++ NT+I G C AK R+ D L+ M+
Sbjct: 189 NSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAK-RVDDGIKLLHEML 247
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R G D Y+ L+ G+C+ G++ + EM+++
Sbjct: 248 RRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 122/219 (55%), Gaps = 5/219 (2%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ +GC+ + + +N ++ GLC GRV EA+ L+ +M NG + N T+ +++ G+C +G
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D A+ LR + E+++ DV Y +I+ CK G +A +L EM +G+ P V ++N
Sbjct: 61 TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ G+ A LL+ M + + P+ V++N +I + +G++ + E+L M+
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAF-VKEGKISEAEELYREML-- 177
Query: 432 GHNL--DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
G N+ D Y+ L+ G+C+ +++ I MV+K G
Sbjct: 178 GRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGG 216
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+L+ V+ I AEE + +++ N+ P D TY ++I G+CK +++AK +FD+
Sbjct: 152 TFNALINAFVKEGKISEAEELYREMLGRNIFP-DTITYNSLIDGFCKHSRLDDAKHIFDL 210
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ NT+I G C+ +++ K ++EM+ RG P+ ++YN +I+G C G
Sbjct: 211 MVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGD 270
Query: 277 VDEAKMLMAKM 287
++ A+ L +M
Sbjct: 271 LNAAQDLFQEM 281
>gi|255660950|gb|ACU25644.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 481
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 219/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHGAKKTEHALQFFRWVERSNL----FQHDRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG +G V+ ++ F + +++ + SY++L V++R
Sbjct: 70 DMPKKGLEWDEDLWVL-MIDSYGKKGIVQESVKLFQKMEELGVERTIKSYDALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A F+ M + P+++
Sbjct: 129 GRFMMAKRYFNKMLNEG-IEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRDITPDVIT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT+ING+ + ++EEA++ EM R P +TY +I G RVD+A LM +M+
Sbjct: 188 YNTLINGYYRVKKMEEAERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDALSLMEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +++ + P D + +I+G CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPTDNSIFLKLISGQCKAGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN + D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGVLIENYCKAEKYDKAVNLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G + T + L++G+ +EG+ ++
Sbjct: 364 TLHMEPSAYNPMIEYLC-DNGQTAKAETLVRQLMKLGVQ-EPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 154/322 (47%), Gaps = 15/322 (4%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + A +FF + + N+ D T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHGAKKTEHALQFFRWVERSNLFQHDRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + KKG ++E+ K +M G +Y+A
Sbjct: 63 HARCILLDMPKKG--LEWDEDLWVLMIDSYGKKGIVQESVKLFQKMEELGVERTIKSYDA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++ +
Sbjct: 121 LFKVILRRGRFMMAKRYFNKMLNEGIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRD 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V +D A+
Sbjct: 181 ITPDVITYNTLINGYYRVKKMEEAERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE----DLVDRMIRSGHNLDFTMYSC 442
L+++M PN ++Y+T++ GLC A+ +M + + ++VD+ I N +++
Sbjct: 241 SLMEEMKGFGIKPNAITYSTLLPGLCNAE-KMSEAQSILKEMVDKYIAPTDN---SIFLK 296
Query: 443 LLKGYCEEGNVENVMQIAHEMV 464
L+ G C+ GN++ + M+
Sbjct: 297 LISGQCKAGNLDAAADVLKAMI 318
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCDNGQTAKAETLVRQLMKLGVQEP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
M V AY++++ + KK E +AK ++ M+ G P+ + +++
Sbjct: 429 MLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVM 480
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 162/309 (52%), Gaps = 5/309 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YNSL+ L A ++ E + P+V T+ ++I + K G + A+K+F
Sbjct: 291 VFTYNSLISCLCNYGRWSDASRLLSDMI-ERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 349
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M ++ PN++ YN++INGFC L+EA++ M+++ C P+ +TYN +I G C
Sbjct: 350 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKA 409
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
RV+E L +M G N T+ ++++GL G D A + ++ + PD+ +Y
Sbjct: 410 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 469
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++G CK GK ++A+ + + ++ ++P ++++N + + + G+++ L +
Sbjct: 470 SILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN + Y T+I G C KG ++ + L M G D Y+ L++ +G+
Sbjct: 530 KGVKPNVIIYTTMISGFC-RKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKA 588
Query: 455 NVMQIAHEM 463
++ EM
Sbjct: 589 ASAELIKEM 597
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 176/377 (46%), Gaps = 40/377 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
SKL+ A I Q + + Y+Y+ LL R + + LA +++K
Sbjct: 85 SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMK 144
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
PD+ T ++++ GYC I A + D M KP+ + +NT+I+G +
Sbjct: 145 LGY-EPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 203
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA-----KM---------------- 282
EA ++ M+ RGC+P+ TY ++ GLC G +D A KM
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTII 263
Query: 283 --------------LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
L KM G K +V T+ S++ LC G++ A L +++E +N
Sbjct: 264 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P+V ++ +I+ F K GK EA L EM R + P + ++N++ + LD A +
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
M DCLP+ V+YNT+I G C AK R+++ +L M + G + Y+ L++G
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAK-RVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 442
Query: 449 EEGNVENVMQIAHEMVT 465
+ G+ + +I +MV+
Sbjct: 443 QAGDCDMAQKIFKKMVS 459
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 164/310 (52%), Gaps = 7/310 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ LL + ++N + Q+ +N+ +P + TY+ ++ +C+ + A V
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQM--QNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGK 141
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +P+++ ++++NG+C + EA +++M+ G +P+ +T+N +I+GL ++ +
Sbjct: 142 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 201
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
EA L+ +M G + ++ T+ +++ GLC G D A+ L+ + + + +V Y
Sbjct: 202 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNT 261
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G CK D+A L +M +G+KP VF++N++ L G A LL M +
Sbjct: 262 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V++N++I +G++ + E L D MI+ + + Y+ L+ G+C ++
Sbjct: 322 INPNVVTFNSLIDAFA-KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 380
Query: 457 MQIAHEMVTK 466
QI MV+K
Sbjct: 381 QQIFTLMVSK 390
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 124/244 (50%), Gaps = 1/244 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ ++ +++ K + + +M N G N TY+ ++ C ++ A +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAV 138
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ KM G++ ++ T S+L G C + +AV + ++E PD ++ +I+G
Sbjct: 139 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFL 198
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
K+ EA++L+ M ARG +P +F++ V L + G++D A+ LLK+M + N V
Sbjct: 199 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVI 258
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YNTII GLC K M D DL ++M G D Y+ L+ C G + ++ +M
Sbjct: 259 YNTIIDGLCKYK-HMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDM 317
Query: 464 VTKK 467
+ +K
Sbjct: 318 IERK 321
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 132/297 (44%), Gaps = 40/297 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A+ G + A F + Q + +YNSL+ + + A++ F +V ++
Sbjct: 332 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 391
Query: 189 VVPPDVSTYTTMIRGYCKMGMIEN-----------------------------------A 213
+P DV TY T+I+G+CK +E A
Sbjct: 392 CLP-DVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 450
Query: 214 KKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+K+F M V P+++ Y+ +++G CK G+LE+A + PN TYN MI G
Sbjct: 451 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEG 510
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
+C G+V++ L + L G K NV + +M+ G C G ++A R + E PD
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPD 570
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
Y +I + G + L+KEMR+ G + + V +L +G L+++ L
Sbjct: 571 SGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSYL 626
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L++A EM+ P+ + ++ ++ + + D L +M+ G N T+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+L C + A+ L +M+ PD+ + ++NG+C + EA++L+ +M
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G KP +FN + L + + A+ L+ +M C P+ +Y T++ GLC +G +
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC-KRGDIDL 239
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+ +M + + +Y+ ++ G C+ ++++ + ++M TK
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 285
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 202/433 (46%), Gaps = 18/433 (4%)
Query: 40 NISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAIT 99
++S+ L +F L ++V +V+ + + A+ FF+W + P H C +
Sbjct: 84 ELASRRLCEFGGYLVPSVVGRVLQQLDDLDKAVKFFDWCTG---QPGYKHSKFTC-NCLL 139
Query: 100 DVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG 155
+ A L KN S LI + + + A + ++E
Sbjct: 140 SAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA---YRLLDEMEKR 196
Query: 156 ACLYSYNSLLGVLVR--VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
+ +N++ +++ ++ ++ H + P V TYT ++ CK I +A
Sbjct: 197 G-IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDA 255
Query: 214 KKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+ + M PN++ YNT+INGFCK G ++EA N+M+ C P+ TYN +I G
Sbjct: 256 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 315
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C R + L+ +M G + N T+ +++ L GK+ A + ++ + P
Sbjct: 316 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 375
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
++ ++I+ FCK+G+ D A L + M RG P ++++N + +D A LL+
Sbjct: 376 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 435
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M + C P+ V+YN+I+ GLC A ++ + ++ + + G+ LD S L+ G C+
Sbjct: 436 RMTEAGCPPDVVTYNSIVSGLCKA-SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 494
Query: 451 GNVENVMQIAHEM 463
+++ ++ EM
Sbjct: 495 RRLDDAEKLLREM 507
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 164/311 (52%), Gaps = 13/311 (4%)
Query: 160 SYNSLLGVLVR----VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
+YN+L+ LV+ +++ LA+ + K P T+ MI +CK+G ++ A +
Sbjct: 343 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK-----PSHFTFNLMIDMFCKVGQLDLAYE 397
Query: 216 VFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+F +MT + P++ YN MI+G C+ +++A++ + M GC P+ +TYN+++ GLC
Sbjct: 398 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+VDEA + +R G+ +V T +++ GLC + D A LR + PDV
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 517
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y ++I+GFCK + D++++ EM +G PTV +++ V L ++ + +LLK M
Sbjct: 518 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 577
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ P+ + Y ++I GLC + + E L M ++G Y+ L+ C+
Sbjct: 578 LERGVTPDAIVYTSVIDGLCKSDSYDEAYE-LYKLMKQTGCAPTVVTYNVLVDKLCKVSR 636
Query: 453 VENVMQIAHEM 463
++ + + M
Sbjct: 637 LDEAIHLLEVM 647
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 160/338 (47%), Gaps = 40/338 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ ++ ++ A F+Q++ EN PDV TY +I GYCK ++ K+
Sbjct: 273 TYNTLINGFCKLGNMDEAVVLFNQML-ENSCSPDVFTYNILIDGYCKQERPQDGAKLLQE 331
Query: 220 MT---VKPNLLAYNT-----------------------------------MINGFCKKGE 241
M +PN + YNT MI+ FCK G+
Sbjct: 332 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ 391
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L+ A + M +RGC P+ TYN MI G C R+D+A+ L+ +M G +V T+ S
Sbjct: 392 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 451
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GLC + D+A + DV + +I+G CK + D+A LL+EM G
Sbjct: 452 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 511
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P V ++ + + +LD+++ +M C+P ++Y+ +I LC + R++D
Sbjct: 512 SAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKS-ARVRDG 570
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
L+ M+ G D +Y+ ++ G C+ + + ++
Sbjct: 571 CMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYEL 608
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 175/370 (47%), Gaps = 46/370 (12%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSL 164
++A +L+ K S F + +I + G + A F + + + CL Y+YN +
Sbjct: 361 FNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF---QLMTDRGCLPDIYTYNIM 417
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--- 221
+ R N I A + ++ E PPDV TY +++ G CK ++ A +V++V+
Sbjct: 418 ISGACRANRIDDARQLLERMT-EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 476
Query: 222 -----------------------------------VKPNLLAYNTMINGFCKKGELEEAK 246
P+++AY +I+GFCK +L+++
Sbjct: 477 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSL 536
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+EM+++GC P +TY+ +I LC + RV + ML+ M G + + S++ GL
Sbjct: 537 AFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGL 596
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C +D+A + + + P V +Y V+++ CK+ + DEAI LL+ M + G P
Sbjct: 597 CKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDT 656
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++N+VF ++ E D+A L + M C P Y+ ++ L +A+ +M ++ +
Sbjct: 657 VTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKL-VAEEKMDQAMEIWE 715
Query: 427 RMIRSGHNLD 436
+ +G ++D
Sbjct: 716 EALEAGADVD 725
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G+K + T +L K +A +N +PD +Y +INGFCK +A
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
LL EM RG+ P +N + + L +NG +D A++ + M Q +C P+ ++Y ++
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDA 245
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
LC + R+ D +++ MI +G + Y+ L+ G+C+ GN++ + + ++M+
Sbjct: 246 LCKS-ARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQML 298
>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 484
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 215/431 (49%), Gaps = 31/431 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL- 115
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSAKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 116 ---KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
K + + +I +YG +G V+ ++ F + +++ + SY++L V++R
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRG 129
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAY 229
+A+ +F++++ E + P T+ +I G+ G +E A + F+ M + P+++ Y
Sbjct: 130 RYMMAKRYFNKMLSEG-IEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSREISPDVVTY 188
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
NTMING+ + + EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 189 NTMINGYYRVKKXEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG 248
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKSD 348
G K N + ++L GLC K +A L+ +M+ + P D + +I CK G D
Sbjct: 249 FGIKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGNLD 308
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNFV 402
A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 309 AASDVLKAM----IRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQST 364
Query: 403 ------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 365 LHLEPSAYNPMIEYLC-NNGQAAKAETLVRQLLKWGVQ-DPTALNTLIRGHSQEGSPDSA 422
Query: 457 MQIAHEMVTKK 467
++ M+ +K
Sbjct: 423 FELLKIMLRRK 433
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 149/318 (46%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLXPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +Y+A
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T ++ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKXEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN + Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
C+ GN++ + M+
Sbjct: 301 QCKSGNLDAASDVLKAMI 318
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAAKAETLVRQLLKWGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AY++++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 173/353 (49%), Gaps = 5/353 (1%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+L +LS LI G +AAI + ++ + Y+ ++ L +
Sbjct: 154 VLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTL 213
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYN 230
+ A + + ++V + + PDV TY+ ++ G+C +G + A + + M + P++ Y
Sbjct: 214 VDEAYDLYTEMVGKGI-SPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYT 272
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+++ CK+G+++EA+ + M+ + + Y+ ++ G C+ V+ AK + M
Sbjct: 273 ILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQM 332
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G +V + M+ GLC + + D+A+ + + NM PD +Y +I+ CK G+
Sbjct: 333 GVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYV 392
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
L EM RG P V ++N + L +NG LDRAI L +M PN ++ ++ G
Sbjct: 393 WDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDG 452
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
LC GR+++ + ++ G+ L+ Y+ ++ G C+EG ++ + + M
Sbjct: 453 LCKV-GRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRM 504
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 192/388 (49%), Gaps = 13/388 (3%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE 153
C+ V+L+ S +S L N ++ ++ L+K G VK A+ FH K +
Sbjct: 102 CFCHFGQVVLAFSGVSKILKLGYQPNTIT---LNTLMKGLCLEGKVKEAL-RFHD-KVLA 156
Query: 154 NGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
G L SY L+ + ++ + A +I + ++ P+V Y+ +I CK +++
Sbjct: 157 QGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSI-RPNVVIYSMIIDRLCKDTLVD 215
Query: 212 NAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
A ++ M + P+++ Y+ +++GFC G+L A +NEM+ P+ TY ++
Sbjct: 216 EAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILV 275
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
LC G+V EA+ ++A M +V + +++ G C+V + + A + + +
Sbjct: 276 DALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVT 335
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PDV Y ++ING CKI + DEA++L +E+ + + P ++ ++ L ++G + L
Sbjct: 336 PDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDL 395
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+M P+ ++YN +I LC G + L ++M + ++ LL G C
Sbjct: 396 FDEMLDRGQPPDVITYNNLIDALC-KNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLC 454
Query: 449 EEGNVENVMQIAHEMVTKKGRLLKLKNF 476
+ G ++N ++ +++T KG L ++ +
Sbjct: 455 KVGRLKNALEFFQDLLT-KGYCLNVRTY 481
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 126/235 (53%), Gaps = 4/235 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y++L+ VN + A+ F+ + + V P DV Y+ MI G CK+ ++ A +F+ +
Sbjct: 306 YSTLMDGYCLVNEVNNAKRVFYTMTQMGVTP-DVHCYSIMINGLCKIKRVDEALNLFEEI 364
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K P+ + Y ++I+ CK G + +EM++RG P+ +TYN +I LC NG +
Sbjct: 365 HQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHL 424
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A L KM+ + NV T +L GLC VG+ A+ + ++++ +V++Y V+
Sbjct: 425 DRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVM 484
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
ING CK G DEA++L M G +F + R + E D+A L+++M
Sbjct: 485 INGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREM 539
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 146/271 (53%), Gaps = 11/271 (4%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
+V Y T I Y +M + E V+P+ N +IN FC G++ A ++++
Sbjct: 70 NVKRYPTAISLYKQMELSE----------VEPDYFTLNIIINCFCHFGQVVLAFSGVSKI 119
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ G +PN +T N ++ GLC+ G+V EA K+ GF+ + ++ ++ G+C +G+
Sbjct: 120 LKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGET 179
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
A+ LR + ++ P+V Y ++I+ CK DEA L EM +G+ P V +++ +
Sbjct: 180 RAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSIL 239
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
G+L+RAI LL +M + P+ +Y ++ LC +G++++ E+++ M+++
Sbjct: 240 VSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALC-KEGKVKEAENVLAVMVKAC 298
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
NLD +YS L+ GYC V N ++ + M
Sbjct: 299 VNLDVVVYSTLMDGYCLVNEVNNAKRVFYTM 329
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 141/278 (50%), Gaps = 5/278 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y L+ L + +K AE +VK V DV Y+T++ GYC + + NAK+VF
Sbjct: 268 IYTYTILVDALCKEGKVKEAENVLAVMVKA-CVNLDVVVYSTLMDGYCLVNEVNNAKRVF 326
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
MT V P++ Y+ MING CK ++EA E+ + P+ +TY ++I LC +
Sbjct: 327 YTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKS 386
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+ L +M G +V T+ +++ LC G D+A+ + + + P+V ++
Sbjct: 387 GRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTF 446
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++G CK+G+ A+ +++ +G V ++ + L + G LD A+ L +M
Sbjct: 447 TILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMED 506
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
C+ + V++ +I K E LV MI G
Sbjct: 507 NGCISDAVTFEIMIRAF-FDKDENDKAEKLVREMIARG 543
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 15/289 (5%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLI----SIAASLLKNSNKLSDFFISKLIKAYGDRG 137
N NP+ Y YT + D L + ++ A ++K L S L+ Y
Sbjct: 263 NINPDIY-----TYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVN 317
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
V A F+ Q+ ++ Y+ ++ L ++ + A F +I ++N+VP D TY
Sbjct: 318 EVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVP-DTVTY 376
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T++I CK G I +FD M + P+++ YN +I+ CK G L+ A N+M +
Sbjct: 377 TSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKD 436
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+ RPN T+ ++ GLC GR+ A + G+ NV T+ M+ GLC G D+
Sbjct: 437 QAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDE 496
Query: 315 AVGYLRNVMEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
A+ L++ ME N D ++E++I F ++D+A L++EM ARGL
Sbjct: 497 ALA-LQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 116/239 (48%), Gaps = 4/239 (1%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+ +N ++ A +M P+ T N +I C G+V A
Sbjct: 56 PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSG 115
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
++K+ G++ N T +++KGLC+ GK +A+ + V+ SY ++ING CK
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
IG++ AI LL+ + ++P V ++ + L ++ +D A L +M P+ V+
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV---ENVMQI 459
Y+ ++ G C+ G++ DL++ M+ N D Y+ L+ C+EG V ENV+ +
Sbjct: 236 YSILVSGFCIV-GQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAV 293
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 19/281 (6%)
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A N M + P+ +N ++ L R A L +M L+ + + T +
Sbjct: 40 DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ C G+ A + +++ P+ + ++ G C GK EA+ ++ A+G
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+ + S+ + + + GE AI LL+++ + PN V Y+ II LC + +
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLC-KDTLVDEAY 218
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV------------------ 464
DL M+ G + D YS L+ G+C G + + + +EMV
Sbjct: 219 DLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDAL 278
Query: 465 TKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQV 505
K+G++ + +N L +V A + + +V + + + V++V
Sbjct: 279 CKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEV 319
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
+D+A+S M P F FN + LV AI L KQM + P++ + N
Sbjct: 39 ADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNI 98
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
II C G++ V ++++ G+ + + L+KG C EG V+ ++ +++ +
Sbjct: 99 IINCFCHF-GQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQ 157
Query: 467 KGRL 470
RL
Sbjct: 158 GFRL 161
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 195/433 (45%), Gaps = 46/433 (10%)
Query: 95 YTAITDVLLSHSLISIAAS----LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT + D L L A ++ N K +++ + LI Y G K + +
Sbjct: 237 YTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMS 296
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC----- 205
Y+Y SLL L + + A FF ++++ + P VSTY +I GY
Sbjct: 297 ARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGI-KPKVSTYGILIHGYATKGAL 355
Query: 206 ------------------------------KMGMIENAKKVFDVMT---VKPNLLAYNTM 232
K GMI+ A +F+ M + PN++ Y +
Sbjct: 356 SEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGAL 415
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
I+ CK G +++A+ N+M+N G PN + +N+++YGLC + + A+ L+ +M G
Sbjct: 416 IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGI 475
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
N +++ LC VG+ + + + + PD SY +I+G+C G++DEA
Sbjct: 476 CPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEK 535
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+ M + GL PT ++N + +D A L ++M + P V+YNTI+ GL
Sbjct: 536 VFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLF 595
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLK 472
K R + ++L MI SG D Y+ +L G C+ V+ ++ + + KG L
Sbjct: 596 QTK-RFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCS-KGLQLN 653
Query: 473 LKNFLTRVVDALL 485
+ F T ++ ALL
Sbjct: 654 IITF-TIMIGALL 665
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 137/267 (51%), Gaps = 4/267 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+PPDV TYTT+I G CK + + A+ VF M KPN YN +I+G+ G+ +E
Sbjct: 230 IPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVV 289
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + EM RG +P+ TY +++ LC NGR EA+ M G K VST+ ++ G
Sbjct: 290 QMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGY 349
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
G + +L ++E ++PD + + + + K G D+A+ + +MR GL P V
Sbjct: 350 ATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNV 409
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++ A+ L + G +D A + QM PN V +N+++ GLC + + E+LV
Sbjct: 410 VNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVD-KWERAEELVY 468
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNV 453
M+ G + ++ L+ C G V
Sbjct: 469 EMLDQGICPNAVFFNTLICNLCNVGRV 495
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 184/372 (49%), Gaps = 17/372 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI A G V A F+Q I G + +NSL+ L V+ + AEE ++++
Sbjct: 415 LIDALCKLGRVDDAEVKFNQ--MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLD 472
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + P V + T+I C +G + +++ D+M V+P+ +Y +I+G+C G +
Sbjct: 473 QGICPNAV-FFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTD 531
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+K + M++ G P E+TYN +++G C R+D+A L +M G V T+ ++L
Sbjct: 532 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 591
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GL +F +A N++ + D+ +Y +++NG CK DEA + + + ++GL+
Sbjct: 592 HGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQ 651
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+ +F + L++ G + A+ L +P +PN V+Y + L + +G +++ +
Sbjct: 652 LNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENL-IEEGSLEEFDS 710
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDA 483
L M ++G + M + L++ G++ A ++K L +NF
Sbjct: 711 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISR----AGAYLSK----LDERNFSVEASTT 762
Query: 484 LLLMWIVTGGSW 495
LLM I T +
Sbjct: 763 SLLMSIFTSDEY 774
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 183/393 (46%), Gaps = 60/393 (15%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRV---NSIKLAEEFFHQIVKE--NVVPPDVSTYTTM 200
H A+ A + ++N LL + R ++ +LA F+++V+E + V P++ TY+ +
Sbjct: 41 LHHARP----ASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCTYSIL 96
Query: 201 IRGYCKMGMIE-----------------------------NAKKVFDVMTV--------- 222
I +C+MG +E + K+V + M V
Sbjct: 97 IGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELG 156
Query: 223 -KPNLLAYNTMINGFCKKGELEEAKKCMNEMMN---RGCRPNELTYNAMIYGLCINGRVD 278
P+ ++Y ++ G C + EEA + ++ M + R C PN ++Y+ +I G G+VD
Sbjct: 157 CMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVD 216
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+ L +M G +V T+ +++ GLC FD+A G + +++ P+ +Y +I
Sbjct: 217 KPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLI 276
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
+G+ IGK E + +L+EM ARGLKP +++ ++ L +NG A M +
Sbjct: 277 HGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIK 336
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P +Y +I G KG + ++ +D M+ +G + D +++ Y + G ++ M
Sbjct: 337 PKVSTYGILIHGYA-TKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMD 395
Query: 459 IAHEM--------VTKKGRLLKLKNFLTRVVDA 483
I ++M V G L+ L RV DA
Sbjct: 396 IFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 428
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 164/307 (53%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+G + LA Q++K+N P V TYT +I G I+ A K+ D
Sbjct: 183 TYNILIGNFCGRGRLDLALRVMDQLLKDNC-KPTVITYTILIEATITQGGIDEAMKLLDE 241
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++P+ YN ++NG CK+G L+ A + ++ + GC TYN ++ L G+
Sbjct: 242 MLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGK 301
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ + LM+ M + G + N T+ +++ LC GK D+A L+ + E + PD SY+
Sbjct: 302 WEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDP 361
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ C+ GK D AI L +M + G P + S+N++ L +NG D A+ + +++ ++
Sbjct: 362 LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVG 421
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C PN SYNT+ L + +++ + ++ M+ +G + D Y+ L+ C +G V+
Sbjct: 422 CPPNAGSYNTLFGALWSSGDKIRAL-GMILEMLSNGIDPDEITYNSLISCLCRDGLVDQA 480
Query: 457 MQIAHEM 463
+++ +M
Sbjct: 481 IELLVDM 487
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 147/288 (51%), Gaps = 3/288 (1%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV--KPNLLAYNTMINGFC 237
+F Q + PDV T +I+G+ M IE A +V +++ KP++ AYN +I+GFC
Sbjct: 98 YFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFC 157
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K ++ A K ++ M RG P+ +TYN +I C GR+D A +M ++ + K V
Sbjct: 158 KADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVI 217
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ G D+A+ L ++ + PD +Y VV+NG CK G D A L +
Sbjct: 218 TYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRI 277
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
G V ++N + R L+ G+ + L+ M C PN ++Y+T+I LC G+
Sbjct: 278 SKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALC-RDGK 336
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ + ++++ M D Y L+ C EG V+ ++ +M++
Sbjct: 337 IDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMIS 384
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 143/271 (52%), Gaps = 5/271 (1%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
A + +YN LL L+ + E+ ++ + P + TY+T+I C+ G I+ AK
Sbjct: 284 AGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPI-TYSTLITALCRDGKIDEAKN 342
Query: 216 VFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
V VM K P+ +Y+ +I+ C++G+++ A + +++M++ G P+ L+YN+++ LC
Sbjct: 343 VLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLC 402
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
NG DEA + K+ G N ++ ++ L G +A+G + ++ ++PD
Sbjct: 403 KNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEI 462
Query: 333 SYEVVINGFCKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I+ C+ G D+AI LL +M + +PTV S+N V L + + AI +L
Sbjct: 463 TYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAA 522
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
M CLPN +Y +I G+ A R +E
Sbjct: 523 MVNEGCLPNETTYTLLIQGIGFAGWRYDAME 553
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 127/267 (47%), Gaps = 38/267 (14%)
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNEL------------------------------ 262
+N CK + +E+ + M+NRG +P+ +
Sbjct: 84 LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGK 143
Query: 263 ----TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
YNA+I G C RVD A ++ +M+ GF+ +V T+ ++ C G+ D A+
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+ +++ N P V +Y ++I G DEA+ LL EM +RGL+P +++N V + +
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
G LDRA L ++ + C+ +YN ++ L + +G+ + E L+ M+ G +
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDL-LNEGKWEYGEKLMSDMLVKGCEPNPI 322
Query: 439 MYSCLLKGYCEEGNVE---NVMQIAHE 462
YS L+ C +G ++ NV+++ E
Sbjct: 323 TYSTLITALCRDGKIDEAKNVLKVMKE 349
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 100/223 (44%), Gaps = 42/223 (18%)
Query: 307 CVVGKFDQAVGYLRN----------------------------------VMEANMNPDVK 332
C K+D+++ +L++ ++E + PDV
Sbjct: 88 CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGKPDVF 147
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y VI+GFCK + D A +L M+ RG +P V ++N + G LD A+ ++ Q+
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL 207
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ +C P ++Y TI+ + +G + + L+D M+ G D Y+ ++ G C+EG
Sbjct: 208 LKDNCKPTVITY-TILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266
Query: 453 VENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSW 495
++ + ++K G + + + +LL ++ G W
Sbjct: 267 LDRAFEFLSR-ISKNGCVAGVSTY------NILLRDLLNEGKW 302
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 160/283 (56%), Gaps = 11/283 (3%)
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
I+ A++V++VM ++P ++ YNTM++ FCK+G+++EA + + +M GC PN++TYN
Sbjct: 171 IDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNV 230
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
++ GL +G +++AK L+ +M G + + T+ +++G C G+ D+A ++
Sbjct: 231 LVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRG 290
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
P + +Y ++ G CK G+ +A LL M + L P + S+N + G + A
Sbjct: 291 AVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAF 350
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE---DLVDRMIRSGHNLDFTMYSCL 443
LL ++ +P+ V+YNT+I GLC RM D++ L D MI+ G + D ++ L
Sbjct: 351 LLFAELRFRGLVPSVVTYNTLIDGLC----RMGDLDVAMRLKDEMIKHGPDPDVFTFTIL 406
Query: 444 LKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLL 486
++G+C+ GN+ ++ EM+ +G ++TR+V L L
Sbjct: 407 VRGFCKLGNLPMAKELFDEMLN-RGLQPDRFAYITRIVGELKL 448
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 169/371 (45%), Gaps = 9/371 (2%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLKNSNKL----SDFFISKLIKAYGDRGNVKAAIFWF 146
T Y + D + A LL K+ +D + L+ G ++ A
Sbjct: 189 TVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELI 248
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ ++ Y+Y+ L+ + A +++ VP V TY T++ G CK
Sbjct: 249 QEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLV-TYNTIMYGLCK 307
Query: 207 MGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G + +A+K+ DVM K P+L++YNT+I G+ + G + EA E+ RG P+ +T
Sbjct: 308 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVT 367
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YN +I GLC G +D A L +M +G +V T +++G C +G A ++
Sbjct: 368 YNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEML 427
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ PD +Y I G K+G +A + +EM ARG P + ++N L + G L
Sbjct: 428 NRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLK 487
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A L+K+M +P+ V+Y +II MA G ++ + M+ G Y+ L
Sbjct: 488 EASELVKKMLYNGLVPDHVTYTSIIHAHLMA-GHLRKARAVFLEMLSKGIFPSVVTYTVL 546
Query: 444 LKGYCEEGNVE 454
+ Y G ++
Sbjct: 547 IHSYAVRGRLK 557
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 154/313 (49%), Gaps = 5/313 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L SYN+L+ R+ +I A F ++ +VP V TY T+I G C+MG ++ A ++
Sbjct: 330 LVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVP-SVVTYNTLIDGLCRMGDLDVAMRLK 388
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M P++ + ++ GFCK G L AK+ +EM+NRG +P+ Y I G
Sbjct: 389 DEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 448
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +A + +M GF ++ T+ + GL +G +A ++ ++ + PD +Y
Sbjct: 449 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 508
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+ G +A ++ EM ++G+ P+V ++ + G L AIL +M +
Sbjct: 509 TSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 568
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN ++YN +I GLC + +M M G + + Y+ L+ C G+ +
Sbjct: 569 KGVHPNVITYNALINGLCKVR-KMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQ 627
Query: 455 NVMQIAHEMVTKK 467
+++ +M+ ++
Sbjct: 628 EALRLYKDMLDRE 640
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 163/360 (45%), Gaps = 43/360 (11%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLK---NSNKLSDFF-ISKLIKAYGDRGNVKAAIFWF 146
T Y I L +S A LL N N + D + LI Y GN+ A F
Sbjct: 294 TLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLF 353
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ + + +YN+L+ L R+ + +A +++K PDV T+T ++RG+CK
Sbjct: 354 AELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGP-DPDVFTFTILVRGFCK 412
Query: 207 MGMIENAKKVFDVMTVK--------------------------------------PNLLA 228
+G + AK++FD M + P+L+
Sbjct: 413 LGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT 472
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YN I+G K G L+EA + + +M+ G P+ +TY ++I+ + G + +A+ + +M
Sbjct: 473 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEML 532
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G +V T+ ++ V G+ A+ + + E ++P+V +Y +ING CK+ K D
Sbjct: 533 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 592
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A EM+A+G+ P +++ + G A+ L K M + P+ +++ ++
Sbjct: 593 QAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALL 652
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 101/189 (53%), Gaps = 3/189 (1%)
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKK 247
PPD+ TY I G K+G ++ A ++ M + P+ + Y ++I+ G L +A+
Sbjct: 467 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARA 526
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
EM+++G P+ +TY +I+ + GR+ A + +M G NV T+ +++ GLC
Sbjct: 527 VFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLC 586
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
V K DQA + + ++P+ +Y ++IN C +G EA+ L K+M R ++P
Sbjct: 587 KVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSC 646
Query: 368 SFNAVFRIL 376
+ +A+ + L
Sbjct: 647 THSALLKHL 655
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 101/193 (52%), Gaps = 4/193 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN + L ++ ++K A E +++ +VP V TYT++I + G + A+ VF
Sbjct: 470 LITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHV-TYTSIIHAHLMAGHLRKARAVF 528
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P+++ Y +I+ + +G L+ A EM +G PN +TYNA+I GLC
Sbjct: 529 LEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKV 588
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
++D+A +M+ G N T+ ++ C +G + +A+ +++++ + PD ++
Sbjct: 589 RKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTH 648
Query: 335 EVVINGFCKIGKS 347
++ K KS
Sbjct: 649 SALLKHLNKDYKS 661
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI +Y RG +K AI F + + + +YN+L+ L +V + A +FF ++ +
Sbjct: 546 LIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKG 605
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCK 238
+ P+ TYT +I C +G + A +++ M ++P+ ++ ++ K
Sbjct: 606 -ISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 159/328 (48%), Gaps = 39/328 (11%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
AE +I K + D + + +I GYC+MG +E+A ++ + M ++ NL YN MI
Sbjct: 332 AEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMI 391
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
NG+CK G + EA ++EM G RP+ +YN+++ G C G +++A M NGF
Sbjct: 392 NGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFA 451
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
T+ ++LKG C +G D A+ +++ + P+ S +++GF K GK+++A++L
Sbjct: 452 ATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNL 511
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC- 412
KE ARGL +FN V L + + A L+ +M Q C P+ ++Y T+ G C
Sbjct: 512 WKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCK 571
Query: 413 ----------------------------------MAKGRMQDVEDLVDRMIRSGHNLDFT 438
+AK + V D++ M G + +
Sbjct: 572 IGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAK-QHGKVNDILFEMSNRGLSPNTV 630
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y L+ G+C+EG++ + EM+ K
Sbjct: 631 AYGALIAGWCKEGDLHTAYNLYLEMIEK 658
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 194/447 (43%), Gaps = 70/447 (15%)
Query: 86 NKYHHTTPCYTAITDVLLSHSLISIAASL----LKNSNKLSDFFISKLIKAYGDRGNVKA 141
N + TT Y A+ S I A L LK ++ S L+ + G +
Sbjct: 448 NGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEK 507
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ + + ++N+++ L ++ + AEE ++ K+ PPD+ TY T+
Sbjct: 508 ALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKM-KQWRCPPDIITYRTLF 566
Query: 202 RGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
GYCK+G ++ A ++ + + P + +N++I G + + + EM NRG
Sbjct: 567 SGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLS 626
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
PN + Y A+I G C G + A L +M G N+ S++ GKFD+A
Sbjct: 627 PNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLV 686
Query: 319 LRNVMEANMNPDVKS--------------------------YEVVINGFCKIGKSDEAIS 352
L+N++ +M PD+ + + +VI G CK+G+ ++A +
Sbjct: 687 LQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKN 746
Query: 353 LLKEMRARG-----------------------------------LKPTVFSFNAVFRILV 377
LL +++ +G L P + ++N++ L
Sbjct: 747 LLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLC 806
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
++GEL RA+ L K++ PN ++YNT+I C G + + L RMI G +
Sbjct: 807 KSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHC-KDGYITEAFKLKQRMIEEGIHPTV 865
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMV 464
YS L+ G C +G +E +++ +M+
Sbjct: 866 FTYSILINGLCTQGYMEEAIKLLDQMI 892
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 145/293 (49%), Gaps = 32/293 (10%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
P+ Y +I G+CK G + A ++ M K PNL +++++ F +KG+ +EA
Sbjct: 627 PNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLV 686
Query: 249 MNEMMNRGCRPN--------------------------ELTYNAMIYGLCINGRVDEAKM 282
+ ++ P+ ++ +N +I+GLC GR+++AK
Sbjct: 687 LQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKN 746
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L+A ++ GF + T+ S++ G G D A ++ + P++ +Y +I G C
Sbjct: 747 LLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLC 806
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K G+ A+SL K++ +G+ P ++N + ++G + A L ++M + P
Sbjct: 807 KSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVF 866
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY--CEEGNV 453
+Y+ +I GLC +G M++ L+D+MI + + ++ Y L++GY CE +V
Sbjct: 867 TYSILINGLC-TQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDV 918
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 180/406 (44%), Gaps = 66/406 (16%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + +I Y G + A H+ + YSYNSL+ + + A E ++
Sbjct: 385 FVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNT 444
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKG 240
+++ N TY +++G+C +G I++A +++ +M + PN ++ +T+++GF K G
Sbjct: 445 MLR-NGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSG 503
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ E+A E + RG N T+N +I GLC R+ EA+ L+ KM+ ++ T++
Sbjct: 504 KTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYR 563
Query: 301 SMLKGLCVVGKFDQA---------VGY--------------------------LRNVMEA 325
++ G C +G D+A +G+ L +
Sbjct: 564 TLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNR 623
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
++P+ +Y +I G+CK G A +L EM +GL P +F +++ G+ D A
Sbjct: 624 GLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEA 683
Query: 386 ILLLKQMPQMDCLP-------------NFVS-------------YNTIICGLCMAKGRMQ 419
L+L+ + D +P NF+ +N +I GLC GR++
Sbjct: 684 NLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKL-GRIE 742
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
D ++L+ + G D YS L+ G G V+ + M++
Sbjct: 743 DAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLS 788
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 128/264 (48%), Gaps = 20/264 (7%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ +I G CK+G IE+AK + + K + Y+++I+G G ++ A + M+
Sbjct: 728 WNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTML 787
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+ G PN +TYN++IYGLC +G + A L K+ G N T+ +++ C G
Sbjct: 788 SVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYIT 847
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A + ++E ++P V +Y ++ING C G +EAI LL +M + P ++ +
Sbjct: 848 EAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLI 907
Query: 374 R-------ILVENGELDRAILLLKQMPQMDC-LPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ + V LD++ +++K P+ P VS + A GR
Sbjct: 908 QGYVRCESVDVPIMPLDQSTIVVKASPRRAVRRPGSVSRPARLTPAPKASGR-------- 959
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCE 449
D ++ ++ F Y+CL+ +CE
Sbjct: 960 DYVLNMQVSITFQQYNCLIV-FCE 982
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 117/238 (49%), Gaps = 2/238 (0%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+++ ++ G+L+ A + +EM GCR + + N+++ L G + + +M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+ G + T M K C V A+ ++ + + + ++ +Y V+NG+C++G++
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ-MDCLPNFVSYNT 406
++A +L + RG P + ++ + + ++ A +++++ + + + +
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGA 354
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+I G C GRM+D L++ M+ S ++ +Y+ ++ GYC+ G + I HEM
Sbjct: 355 VINGYCQM-GRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 4/207 (1%)
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
+++ ++ L G++D A + +MR G + ++ + S+L L G V +
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
A PD + ++ +CK+ A+ ++EM G++ + +++AV E G+
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL--DFTMY 440
+ A +L +P PN V+Y ++ G C K M++ E +V IR L D ++
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEK-NMEEAEGVVQE-IRKNKQLVVDEAVF 352
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTKK 467
++ GYC+ G +E+ ++ +EMV +
Sbjct: 353 GAVINGYCQMGRMEDAARLLNEMVDSR 379
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
F + ++ +L+ L G+ D A+ + ++S ++N + G +
Sbjct: 169 FSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATV 228
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
++ ++M+ G P F+ + + + + A+ +++M +M N V+Y+ ++ G
Sbjct: 229 AVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGY 288
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
C G+ D ++D + G + + Y+ L+KGYC E N+E + E+ K
Sbjct: 289 CEV-GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNK 343
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 209/428 (48%), Gaps = 25/428 (5%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ N HAL FF W N H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHGAKNAEHALQFFRWVERSNL----LEHNREIHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SY++L V+ R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVISRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+++ +F+++V E + P T+ +I G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMSKRYFNKMVNEG-IEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREITPDVIT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G RVD+A L+ +M+
Sbjct: 188 YNTMINGYNRVKKMEEAEKYFLEMKERKIDPTVVTYTTLIKGYASVDRVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +++ + P D + +I+ CK G
Sbjct: 248 GLGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYVAPTDNSIFMRLISSQCKAGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM--------PQMDCLP 399
D A +LK M + + + + G+ D+A+ LL ++ PQ
Sbjct: 308 DAAADVLKAMIRLSVPTEAGHYGVLIEYYCKAGQYDKAVKLLDKLIEKDIILRPQSTLHM 367
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++ ++
Sbjct: 368 ELSAYNPLIEYLC-NNGQTAKAETLVRQLMKLGVQ-DPTSLNTLIRGHSQEGSPDSAFEL 425
Query: 460 AHEMVTKK 467
M+ +K
Sbjct: 426 LKIMLRRK 433
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN L+ L AE Q++K V P ++ T+IRG+ + G ++A ++
Sbjct: 369 LSAYNPLIEYLCNNGQTAKAETLVRQLMKLGVQDP--TSLNTLIRGHSQEGSPDSAFELL 426
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+M V AY++++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 427 KIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 217/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HA FF W N + H + I ++L S ++ A +L
Sbjct: 6 LVYNVLHSSKTSEHAFHFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 61
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 62 DMPKKGLEWDEDMWVM-MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 120
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+ + +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 121 GRYMMGKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVT 179
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 180 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 239
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ CK G
Sbjct: 240 GFGTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNL 299
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 300 DAAADVLKAM----IRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIMLRPQS 355
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
++N +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 356 TLHLEPSAHNPMIEYLC-NNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDS 413
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 414 AFELLKIMLRRK 425
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 148/311 (47%), Gaps = 7/311 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+ + + VL + + A FF + + N+ + T+ +I + + +A+ +
Sbjct: 2 FDHELVYNVLHSSKTSEHAFHFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILL 61
Query: 219 VMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
M K L ++ MI+ + K+G ++E+ K +M G +YNA+ +
Sbjct: 62 DMPKKG--LEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILR 119
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
GR K KM G + T M+ G + GK + A+ + ++ ++PDV +
Sbjct: 120 RGRYMMGKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVT 179
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+ L+++M
Sbjct: 180 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 239
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
PN ++Y+T++ GLC A+ + L + M + D +++ L+ +C+ GN+
Sbjct: 240 GFGTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNL 299
Query: 454 ENVMQIAHEMV 464
+ + M+
Sbjct: 300 DAAADVLKAMI 310
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 363 AHNPMIEYLCNNGQASKAETLVRQLMKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 420
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 421 MLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 475
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 163/301 (54%), Gaps = 8/301 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y +L+ R ++ A + F+++ ++ V P+ +TT+I +CK G + ++
Sbjct: 255 VYTYGALIKGFCRTGRMENAVKMFNEM-RDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLY 313
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V+ P+L+AYN ++NG C+ L+ A+ + EM N G +P+++TY +I G C +
Sbjct: 314 QDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKD 373
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++D A + KM + T+ +++ GL G+ A LR +MEA + PD +Y
Sbjct: 374 GKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTY 433
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+VI+ FC+ G LLKEM+ +G KP V ++N + L + G++ A +LL M
Sbjct: 434 TMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLN 493
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ P+ ++YN ++ G C G++ + E+L G DF +Y+ L+ ++ +
Sbjct: 494 IGVSPDDITYNILLDGQC-KHGKVANSEELES---SKGMVPDFAVYTSLISELAKKKPAK 549
Query: 455 N 455
N
Sbjct: 550 N 550
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 176/348 (50%), Gaps = 15/348 (4%)
Query: 125 FISKLIKAYGDRGNVKAA----IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
+S+L AY D G + A + + + C G++ R+ S A F
Sbjct: 121 LVSELAAAYADEGLLPDACSLVLLALRRGISLPAPVCS-------GLMSRLPSTPEAYTF 173
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM--TVKPNLLAYNTMINGFCK 238
+ Q++ + P + + ++R + ++G + +A+KVFD M +V+P ++ +NT+I+G C+
Sbjct: 174 YLQLLDAGMAP-ETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLISGMCR 232
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+L+ EM + G +P+ TY A+I G C GR++ A + +MR G N
Sbjct: 233 ARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVV 292
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+++ C G + + +++ + PD+ +Y ++NG C+ A S+++EM+
Sbjct: 293 FTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMK 352
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
GLKP ++ + ++G+LD A+ + ++M + + + V+Y +I GL A GR
Sbjct: 353 NAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKA-GRP 411
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D E ++ M+ + D T Y+ ++ +C +G+V+ ++ EM K
Sbjct: 412 VDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNK 459
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I A+ +G+VK + + + +YN ++ L ++ +K A+ H ++
Sbjct: 436 VIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIG 495
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKK 239
V P D+ TY ++ G CK G + N++++ + P+ Y ++I+ KK
Sbjct: 496 VSPDDI-TYNILLDGQCKHGKVANSEELESSKGMVPDFAVYTSLISELAKK 545
>gi|255661014|gb|ACU25676.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 376
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 153/288 (53%), Gaps = 4/288 (1%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKK 239
+++KE+ D TY ++ G+CK G + + V ++ K +L AY+ MING CK+
Sbjct: 83 ELMKESGYVEDSITYGILVHGFCKNGYLNKSLHVLEIAERKGGVLDAFAYSAMINGLCKE 142
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+L++A +N M+ GC+PN YNA+I GL + ++A ++ +M F V T+
Sbjct: 143 AKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKFEDAIRVLREMGTTHFSPTVVTY 202
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ GLC +F +A ++ +++ +NP V +Y ++I G C K ++A L ++ +
Sbjct: 203 STLINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSLLIKGLCLDCKVEKAFQLWNQVIS 262
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G KP V N + L G++ A+ L M + DC PN V++NT++ G G +
Sbjct: 263 KGFKPDVQMHNIMIHGLCSVGKMQLALSLYFNMNRWDCAPNLVTHNTLMEGF-YKDGDFR 321
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ + R++R+G D Y+ LKG C + + H+ V KK
Sbjct: 322 NALVIWARIMRNGLQPDIISYNITLKGLCSCNRISGAILFLHDAVCKK 369
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 147/296 (49%), Gaps = 4/296 (1%)
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPN--LL 227
+ I A+ + +IV E+ V PD Y M+ G+ ++ I++ K++++M + + +
Sbjct: 2 EIGDIDGAKRVYKEIV-ESKVSPDAVVYNAMLNGFFRVRRIKDCFKLWELMGREGSRSVS 60
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
++N M+ G +++E M G + +TY +++G C NG ++++ ++
Sbjct: 61 SFNIMMRGLFDNAKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSLHVLEIA 120
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
G + + +M+ GLC K D+AV L ++++ P+ Y +ING K
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKF 180
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
++AI +L+EM PTV +++ + L + A L+K+M P+ ++Y+ +
Sbjct: 181 EDAIRVLREMGTTHFSPTVVTYSTLINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSLL 240
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
I GLC+ +++ L +++I G D M++ ++ G C G ++ + + M
Sbjct: 241 IKGLCL-DCKVEKAFQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLALSLYFNM 295
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 35/264 (13%)
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMI---------------------------- 268
C+ G+++ AK+ E++ P+ + YNAM+
Sbjct: 1 CEIGDIDGAKRVYKEIVESKVSPDAVVYNAMLNGFFRVRRIKDCFKLWELMGREGSRSVS 60
Query: 269 ------YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
GL N +VDE + M+ +G+ ++ T+ ++ G C G ++++ L
Sbjct: 61 SFNIMMRGLFDNAKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSLHVLEIA 120
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
D +Y +ING CK K D+A+S+L M G KP +NA+ LV +
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKF 180
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
+ AI +L++M P V+Y+T+I GLC + R + DLV M+ G N YS
Sbjct: 181 EDAIRVLREMGTTHFSPTVVTYSTLINGLCKGE-RFGEAYDLVKEMLDKGLNPSVITYSL 239
Query: 443 LLKGYCEEGNVENVMQIAHEMVTK 466
L+KG C + VE Q+ +++++K
Sbjct: 240 LIKGLCLDCKVEKAFQLWNQVISK 263
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 4/213 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+ YN+L+ LV + + A ++ + P V TY+T+I G CK A +
Sbjct: 165 HVYNALINGLVGASKFEDAIRVLREMGTTHF-SPTVVTYSTLINGLCKGERFGEAYDLVK 223
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P+++ Y+ +I G C ++E+A + N+++++G +P+ +N MI+GLC G
Sbjct: 224 EMLDKGLNPSVITYSLLIKGLCLDCKVEKAFQLWNQVISKGFKPDVQMHNIMIHGLCSVG 283
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++ A L M N+ TH ++++G G F A+ +M + PD+ SY
Sbjct: 284 KMQLALSLYFNMNRWDCAPNLVTHNTLMEGFYKDGDFRNALVIWARIMRNGLQPDIISYN 343
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+ + G C + AI L + + + TV +
Sbjct: 344 ITLKGLCSCNRISGAILFLHDAVCKKIVLTVIT 376
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 174/381 (45%), Gaps = 40/381 (10%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
+D S LI ++ RG + AI + + +Y YNSL+ ++ ++ A FF
Sbjct: 400 NDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFF 459
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK------------------ 223
+++ + + P V +YT++I GYC G + A +++ MT K
Sbjct: 460 DEMIDKGL-KPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFR 518
Query: 224 --------------------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
PN + YN MI G CK+G +A + +N+M+ +G P+ T
Sbjct: 519 ANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYT 578
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y +I LC GRV EAK + + FK N + ++L G C G+ A+G R ++
Sbjct: 579 YRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMV 638
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ ++ D+ Y V+I+G K + LLK M + L+P + ++ + G +
Sbjct: 639 KRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVK 698
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+A + M C PN V+Y T+I LC A G M E L M+ S + Y C
Sbjct: 699 KAFGIWDIMIDEGCTPNIVTYTTLINELCKA-GLMDKAELLWKEMLVSNSTPNHVTYCCF 757
Query: 444 LKGYCEEGNVENVMQIAHEMV 464
L EG++E +Q+ ++M+
Sbjct: 758 LDHLAREGSMEKAVQLHNDML 778
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 170/366 (46%), Gaps = 51/366 (13%)
Query: 148 QAKQIENG-------ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
+A +I+NG A +Y +L+ L +V ++ ++++ VP + + +++
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTE-AALSSL 337
Query: 201 IRGYCKMGMIENAKKVFDVMT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+ G + G + +A FD++ P+L YN +IN CK G+ +EA+ EM
Sbjct: 338 VEGLRRKGKVVDA---FDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGE 394
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+G N++TY+ +I C G++D A + KM + G K V + S++ G C +G
Sbjct: 395 KGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSA 454
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
AV + +++ + P V SY +I+G+C GK EA L EM +G+ P ++F +
Sbjct: 455 AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLIS 514
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC---------------------- 412
L + A L +M + + +PN V+YN +I G C
Sbjct: 515 ALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVP 574
Query: 413 ------------MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+ GR+ + + +D + R L+ YS LL GYC+EG + + + +
Sbjct: 575 DTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVC 634
Query: 461 HEMVTK 466
EMV +
Sbjct: 635 REMVKR 640
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 169/347 (48%), Gaps = 5/347 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+S L++ +G V A ++ K++ L+ YN+L+ L + AE F ++
Sbjct: 334 LSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMG 393
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
++ + DV TY+ +I +C+ G ++ A M +K + YN++ING CK G L
Sbjct: 394 EKGLCANDV-TYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNL 452
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
A +EM+++G +P ++Y ++I G C G++ EA L +M G N T ++
Sbjct: 453 SAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTL 512
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ L + A ++E NM P+ +Y V+I G CK G + +A LL +M +GL
Sbjct: 513 ISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGL 572
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P +++ + L G + A + + + N + Y+ ++ G C +GR++D
Sbjct: 573 VPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYC-KEGRLRDAL 631
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+ M++ G ++D Y+ L+ G +E + V + M ++ R
Sbjct: 632 GVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLR 678
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 170/377 (45%), Gaps = 39/377 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y ++G + A +H+ Y++ +L+ L R N + A F ++++
Sbjct: 475 TSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLE 534
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+N++P +V TY MI G+CK G A ++ + M K P+ Y +I+ C G +
Sbjct: 535 QNMMPNEV-TYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVC 593
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EAKK ++++ + NE+ Y+A+++G C GR+ +A + +M G ++ + ++
Sbjct: 594 EAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLI 653
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G G L+N+ + + PD Y +I+G+ K G +A + M G
Sbjct: 654 DGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCT 713
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV--------------------- 402
P + ++ + L + G +D+A LL K+M + PN V
Sbjct: 714 PNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQL 773
Query: 403 -------------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
SYN ++ G C GR+++ L+D MI + D YS ++ C
Sbjct: 774 HNDMLKGLLANTVSYNILVRGFCKL-GRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCR 832
Query: 450 EGNVENVMQIAHEMVTK 466
GN++ ++ M+ K
Sbjct: 833 RGNLDGAIEFWDTMLNK 849
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 182/419 (43%), Gaps = 29/419 (6%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN------------- 117
AL FFN+ ++H+T + + L++ +L A+SLL+
Sbjct: 88 ALRFFNFLGLHK----NFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVF 143
Query: 118 ---------SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
+ +S LI++Y + ++ F +Q E + + +L L
Sbjct: 144 EALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGL 203
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM-TVKPNLL 227
++ + + F +I+ + PD+ Y +IR +C++ AK++ M + N++
Sbjct: 204 AKIRRVDMVLVLFGEILSMGI-RPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVV 262
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YN +I+G CK + EA + N ++ +G +E+TY ++ GLC + +M +M
Sbjct: 263 VYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEM 322
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
GF + S+++GL GK A + V + P + Y +IN CK GK
Sbjct: 323 IELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKF 382
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
DEA L KEM +GL +++ + G+LD AI L +M YN++
Sbjct: 383 DEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSL 442
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
I G C G + D MI G Y+ L+ GYC +G + ++ HEM K
Sbjct: 443 INGHCKL-GNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGK 500
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 155/342 (45%), Gaps = 41/342 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I+ + GN A +Q Q Y+Y L+ L + A++F + +E+
Sbjct: 547 MIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH 606
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENA--------------------------------KKV 216
++ Y+ ++ GYCK G + +A V
Sbjct: 607 FKLNEMC-YSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAV 665
Query: 217 FDVMT------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
F ++ ++P+ + Y +MI+G+ K G +++A + M++ GC PN +TY +I
Sbjct: 666 FGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINE 725
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC G +D+A++L +M ++ N T+ L L G ++AV L N M + +
Sbjct: 726 LCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAV-QLHNDMLKGLLAN 784
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
SY +++ GFCK+G+ +EA LL EM + P +++ + G LD AI
Sbjct: 785 TVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWD 844
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
M P+ ++YN +I G C+A G + +L D MIR G
Sbjct: 845 TMLNKGLKPDTLAYNFLIYGCCIA-GELGKAFELRDDMIRRG 885
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 111/222 (50%), Gaps = 4/222 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PD YT+MI GY K G ++ A ++D+M PN++ Y T+IN CK G +++A+
Sbjct: 679 PDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELL 738
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
EM+ PN +TY + L G +++A L M L G N ++ +++G C
Sbjct: 739 WKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCK 797
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+G+ ++A L +++ + PD +Y +I C+ G D AI M +GLKP +
Sbjct: 798 LGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLA 857
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+N + GEL +A L M + PN ++ ++ G
Sbjct: 858 YNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 109/207 (52%), Gaps = 5/207 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y S++ + S+K A + ++ E P ++ TYTT+I CK G+++ A+ ++ M
Sbjct: 684 YTSMIDGYSKAGSVKKAFGIWDIMIDEGCTP-NIVTYTTLINELCKAGLMDKAELLWKEM 742
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V PN + Y ++ ++G +E+A + N+M+ +G N ++YN ++ G C GRV
Sbjct: 743 LVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRV 801
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA L+ +M N + T+ +++ C G D A+ + ++ + PD +Y +
Sbjct: 802 EEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFL 861
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKP 364
I G C G+ +A L +M RG+KP
Sbjct: 862 IYGCCIAGELGKAFELRDDMIRRGVKP 888
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 119/256 (46%), Gaps = 13/256 (5%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAI-FWFHQ 148
CY + D + S LLKN + + + +I Y G+VK A W
Sbjct: 648 CYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIW--- 704
Query: 149 AKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
I+ G + +Y +L+ L + + AE + +++ N P V TY + +
Sbjct: 705 DIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHV-TYCCFLDHLAR 763
Query: 207 MGMIENAKKVFDVMT--VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G +E A ++ + M + N ++YN ++ GFCK G +EEA K ++EM++ P+ +TY
Sbjct: 764 EGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITY 823
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+ +IY C G +D A M G K + + ++ G C+ G+ +A +++
Sbjct: 824 STIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIR 883
Query: 325 ANMNPDVKSYEVVING 340
+ P+ +++ + +G
Sbjct: 884 RGVKPNQATHKSLSHG 899
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 155/280 (55%), Gaps = 5/280 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ V V+ + A+E +++++ + P D TY ++I G+CK + A ++FD+
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNEMITRGIAP-DTITYNSLIDGFCKENCLHEANQMFDL 404
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ Y+ +IN +CK +++ + E+ ++G PN +TYN ++ G C +G+
Sbjct: 405 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 464
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ AK L +M G +V T+ +L GLC G+ ++A+ + ++ M + Y +
Sbjct: 465 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 524
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C K D+A SL + +G+KP V ++N + L + G L A +L ++M +
Sbjct: 525 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 584
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
C P+ +YN +I G + VE L++ M G + D
Sbjct: 585 CTPDDFTYNILIRAHLGGSGLISSVE-LIEEMKVCGFSAD 623
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 169/331 (51%), Gaps = 5/331 (1%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V AI F Q +N L + R L F + + N + D+ T T
Sbjct: 80 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGM-ELNGIEHDMYTMT 138
Query: 199 TMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
MI YC+ + A V + +P+ + ++T++NGFC +G + EA ++ M+
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
RP+ +T + +I GLC+ GRV EA +L+ +M GF+ + T+ +L LC G A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ R + E N+ V Y +VI+ CK G D+A+SL EM +G+K V +++++
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L +G+ D +L++M + +P+ V+++ +I + + +G++ + ++L + MI G
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI-DVFVKEGKLLEAKELYNEMITRGIAP 377
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ L+ G+C+E + Q+ MV+K
Sbjct: 378 DTITYNSLIDGFCKENCLHEANQMFDLMVSK 408
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 169/330 (51%), Gaps = 5/330 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
GN A+ F + ++ A + Y+ ++ L + S A F+++ + + DV T
Sbjct: 253 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI-KADVVT 311
Query: 197 YTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y+++I G C G ++ K+ M + P+++ ++ +I+ F K+G+L EAK+ NEM+
Sbjct: 312 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 371
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG P+ +TYN++I G C + EA + M G + ++ T+ ++ C + D
Sbjct: 372 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 431
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ R + + P+ +Y ++ GFC+ GK + A L +EM +RG+ P+V ++ +
Sbjct: 432 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 491
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L +NGEL++A+ + ++M + YN II G+C A ++ D L + G
Sbjct: 492 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS-KVDDAWSLFCSLSDKGV 550
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D Y+ ++ G C++G++ + +M
Sbjct: 551 KPDVVTYNVMIGGLCKKGSLSEADMLFRKM 580
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 159/352 (45%), Gaps = 76/352 (21%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PD T++T++ G+C G + A + D M +P+L+ +T+ING C KG + EA
Sbjct: 167 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 226
Query: 249 MNEMMNRGCRPNELTY-----------------------------------NAMIYGLCI 273
++ M+ G +P+E+TY + +I LC
Sbjct: 227 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 286
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+G D+A L +M + G K +V T+ S++ GLC GK+D LR ++ N+ PDV +
Sbjct: 287 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 346
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV----------------FRILV 377
+ +I+ F K GK EA L EM RG+ P ++N++ F ++V
Sbjct: 347 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 406
Query: 378 ENG-------------------ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
G +D + L +++ +PN ++YNT++ G C + G++
Sbjct: 407 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS-GKL 465
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
++L M+ G Y LL G C+ G + ++I +M +K R+
Sbjct: 466 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM--QKSRM 515
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 40/266 (15%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ + N + A + F +V + PD+ TY+ +I YCK +++ ++F
Sbjct: 381 TYNSLIDGFCKENCLHEANQMFDLMVSKGC-EPDIVTYSILINSYCKAKRVDDGMRLFRE 439
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY------------ 264
++ K PN + YNT++ GFC+ G+L AK+ EM++RG P+ +TY
Sbjct: 440 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 499
Query: 265 -----------------------NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
N +I+G+C +VD+A L + G K +V T+
Sbjct: 500 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 559
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
M+ GLC G +A R + E PD +Y ++I ++ L++EM+ G
Sbjct: 560 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 619
Query: 362 LKPTVFSFNAVFRILVENGELDRAIL 387
+ V +L + LD++ L
Sbjct: 620 FSADSSTIKMVIDMLSDR-RLDKSFL 644
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 115 LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLY-------------SY 161
L +N++ D +SK + D I + +AK++++G L+ +Y
Sbjct: 395 LHEANQMFDLMVSKGCEP--DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 452
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N+L+ + + A+E F ++V V PP V TY ++ G C G + A ++F+ M
Sbjct: 453 NTLVLGFCQSGKLNAAKELFQEMVSRGV-PPSVVTYGILLDGLCDNGELNKALEIFEKMQ 511
Query: 222 VKPNLLA---YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
L YN +I+G C ++++A + ++G +P+ +TYN MI GLC G +
Sbjct: 512 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 571
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKG 305
EA ML KM+ +G + T+ +++
Sbjct: 572 EADMLFRKMKEDGCTPDDFTYNILIRA 598
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 165/311 (53%), Gaps = 5/311 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN L+ L ++ A ++ P DV TY ++ CK A ++ D
Sbjct: 153 YAYNPLMHALCVRGQVRDALVLLDNMLYRGCAP-DVVTYNILLEAACKGRGYRQAMELID 211
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+M V+ P + YN +++G C++G+++ A++ +N + + GC PN + YN ++ GL G
Sbjct: 212 LMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAG 271
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R ++ + L+A+M + +T ++ LC G F +A+ L + + + ++ +Y
Sbjct: 272 RWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYN 331
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
V++G C+ G D A+ LL M+ G KP +F++N + + L + A L+ +M Q
Sbjct: 332 AVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQT 391
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
DCLP+ +++NTII LC MQ VE + +M G + YS +++G + G +E
Sbjct: 392 DCLPDILTFNTIIGFLCQKGLTMQAVE-VFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQ 450
Query: 456 VMQIAHEMVTK 466
+++ +EM +K
Sbjct: 451 SLELLNEMGSK 461
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 160/309 (51%), Gaps = 6/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN++L L + EE ++ EN PP +T + +I C+ G+ + A ++ + M
Sbjct: 260 YNTVLKGLRTAGRWEDVEELIAEMFSENC-PPSEATLSVVISSLCQEGLFQRAIRLLEKM 318
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ N++ YN +++G C++G ++ A ++ M GC+PN TYN ++ GLC R
Sbjct: 319 SKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERW 378
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
++A+ LMAKM ++ T +++ LC G QAV + + E P+ +Y V
Sbjct: 379 EDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSV 438
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I G K GK ++++ LL EM ++G P + +++ + L E +L AI ++ ++
Sbjct: 439 IEGLAKTGKMEQSLELLNEMGSKGFNPEI-NYHLLAECLNEEDKLVEAIQMVHKLQDTGI 497
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P V YNTI+ GLC G+ D++ M+ G D + YS L++G EG ++
Sbjct: 498 SPQAVLYNTILLGLCR-NGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEAR 556
Query: 458 QIAHEMVTK 466
++ + ++
Sbjct: 557 ELLSTLSSR 565
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 143/283 (50%), Gaps = 5/283 (1%)
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
TY+ + GYC++G ++ A++V D M V P+ AYN +++ C +G++ +A ++ M+ R
Sbjct: 122 TYSALADGYCRVGRLDEARRVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYR 181
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
GC P+ +TYN ++ C +A L+ MR+ G T+ ++ G+C G D A
Sbjct: 182 GCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYA 241
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
L ++ P+ +Y V+ G G+ ++ L+ EM + P+ + + V
Sbjct: 242 RELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISS 301
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L + G RAI LL++M + DC N V+YN ++ GLC +G + L+ M G
Sbjct: 302 LCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLC-EQGHVDGALYLLSNMQTDGCKP 360
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLT 478
+ Y+ L+KG C E+ A +++ K + L + LT
Sbjct: 361 NIFTYNILVKGLCNAERWED----AEDLMAKMSQTDCLPDILT 399
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 142/283 (50%), Gaps = 4/283 (1%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGEL 242
++V+ ++ PPDV+ ++R C+ G +A +V + + Y+ + +G+C+ G L
Sbjct: 77 RVVESSLCPPDVALANRLVRDLCRRGRPADAARVVEACGSAATAVTYSALADGYCRVGRL 136
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+EA++ ++ M P+ YN +++ LC+ G+V +A +L+ M G +V T+ +
Sbjct: 137 DEARRVVDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNIL 193
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
L+ C + QA+ + + P +Y V+++G C+ G D A LL + + G
Sbjct: 194 LEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGC 253
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P ++N V + L G + L+ +M +C P+ + + +I LC +G Q
Sbjct: 254 TPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQ-EGLFQRAI 312
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
L+++M + + Y+ ++ G CE+G+V+ + + M T
Sbjct: 313 RLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQT 355
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 137/278 (49%), Gaps = 5/278 (1%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
S+ +S +I + G + AI + + + A + +YN+++ L + A
Sbjct: 291 SEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLL 350
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
+ + + P++ TY +++G C E+A+ + M+ P++L +NT+I C+
Sbjct: 351 SNM-QTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQ 409
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
KG +A + +M +GC PN +TY+++I GL G+++++ L+ +M GF ++
Sbjct: 410 KGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINY 469
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
H + + L K +A+ + + + ++P Y ++ G C+ GK+D+AI +L M
Sbjct: 470 HL-LAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMV 528
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ G P +++ + + L G + A LL + D
Sbjct: 529 SDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRD 566
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 161/311 (51%), Gaps = 5/311 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++YN L+ L + I+ A + ++ E V P + TY +++ YC G ++ A K++
Sbjct: 387 FTYNILIHWLCQRRKIREALNLWEKM-NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYT 445
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K PN++ Y T++ G K ++A + EM G N+ TYN +I GLC+ G
Sbjct: 446 EMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVG 505
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
RV E ++ + GF T+ S++ G G A + + + P++ +Y
Sbjct: 506 RVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYT 565
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
I+G+CK D A+ +L ++R +GL+P + ++N++ + G + A+ +L M +
Sbjct: 566 SFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKD 625
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
LPN YN+ I G K M++ L ++MI+ G +LD Y+ L+ G+ ++GNV
Sbjct: 626 GLLPNISVYNSFITGYKNLK-MMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTF 684
Query: 456 VMQIAHEMVTK 466
+++ EMV K
Sbjct: 685 ALKLYSEMVAK 695
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 5/321 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+K + ++ A + KQ Y+YN+L+ L V + E +
Sbjct: 460 TTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFET 519
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E VP + TY ++I G+ K GM+ +A V+ M K PN++ Y + I+G+CK +
Sbjct: 520 EGFVPTAM-TYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCD 578
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A K +N++ +G RP+ YN++I+G C G + A ++ M +G N+S + S +
Sbjct: 579 LALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G + ++A+ +++ ++ D +Y +I+GF K G A+ L EM A+G
Sbjct: 639 TGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNI 698
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +F A+ L NG++D A LL +M ++D PN + YN +I G + G++Q+
Sbjct: 699 PDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGY-LRNGKLQEAFR 757
Query: 424 LVDRMIRSGHNLDFTMYSCLL 444
L D M+ D T Y L+
Sbjct: 758 LHDEMLERKIMPDDTTYDILV 778
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 174/375 (46%), Gaps = 16/375 (4%)
Query: 95 YTAITDVLLS----HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
+ ++ DVL+ + I LL K+S + L+ Y + V+ A+ F +
Sbjct: 250 FNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETL 309
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ +Y L+ + A E Q+ +++ + P + + +I+G +
Sbjct: 310 RDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM-RDHGLLPSTNEFNMVIKGLLNDKLW 368
Query: 211 ENAKKVFDVMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
++A +F M P+ YN +I+ C++ ++ EA +M G +P +TY++++
Sbjct: 369 KDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLL 428
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
C+NG +DEA L +M GF NV T+ +++KG FD+A L + + ++
Sbjct: 429 LCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVS 488
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
+ +Y +ING C +G+ E +LK G PT ++N++ ++ G + A +
Sbjct: 489 CNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAV 548
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS----GHNLDFTMYSCLL 444
+QM PN V+Y + I G C DL +M+ G D Y+ L+
Sbjct: 549 YQQMCAKGIPPNIVTYTSFIDGYCKTS-----CCDLALKMLNDVRCKGLRPDIAAYNSLI 603
Query: 445 KGYCEEGNVENVMQI 459
G+C+EGN+ + +Q+
Sbjct: 604 FGFCQEGNMSHALQV 618
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 5/279 (1%)
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKK 247
P D + ++R K GM ++A ++FD M ++P+ + I CK + A
Sbjct: 174 PLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALL 233
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ +M + G P + T+N+++ L GR++EA + ++ G K +V +++ G C
Sbjct: 234 VLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYC 293
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
+ + +A+ + + P +Y V+I G + G ++A L ++MR GL P+
Sbjct: 294 LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
FN V + L+ + A+ L K+M +P+ +YN +I LC + ++++ +L ++
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMAD-SGIPDAFTYNILIHWLCQRR-KIREALNLWEK 411
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M +G Y LL YC G ++ +++ EM K
Sbjct: 412 MNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGK 450
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 155/280 (55%), Gaps = 5/280 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ V V+ + A+E +++++ + P D TY ++I G+CK + A ++FD+
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAP-DTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ Y+ +IN +CK +++ + E+ ++G PN +TYN ++ G C +G+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ AK L +M G +V T+ +L GLC G+ ++A+ + ++ M + Y +
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C K D+A SL + +G+KP V ++N + L + G L A +L ++M +
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
C P+ +YN +I G + VE L++ M G + D
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVE-LIEEMKVCGFSAD 594
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 169/331 (51%), Gaps = 5/331 (1%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V AI F Q +N L + R L F + + N + D+ T T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGM-ELNGIEHDMYTMT 109
Query: 199 TMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
MI YC+ + A V + +P+ + ++T++NGFC +G + EA ++ M+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
RP+ +T + +I GLC+ GRV EA +L+ +M GF+ + T+ +L LC G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ R + E N+ V Y +VI+ CK G D+A+SL EM +G+K V +++++
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L +G+ D +L++M + +P+ V+++ +I + + +G++ + ++L + MI G
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI-DVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ L+ G+C+E + Q+ MV+K
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 169/330 (51%), Gaps = 5/330 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
GN A+ F + ++ A + Y+ ++ L + S A F+++ + + DV T
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI-KADVVT 282
Query: 197 YTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y+++I G C G ++ K+ M + P+++ ++ +I+ F K+G+L EAK+ NEM+
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG P+ +TYN++I G C + EA + M G + ++ T+ ++ C + D
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ R + + P+ +Y ++ GFC+ GK + A L +EM +RG+ P+V ++ +
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L +NGEL++A+ + ++M + YN II G+C A ++ D L + G
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS-KVDDAWSLFCSLSDKGV 521
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D Y+ ++ G C++G++ + +M
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 159/352 (45%), Gaps = 76/352 (21%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PD T++T++ G+C G + A + D M +P+L+ +T+ING C KG + EA
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 249 MNEMMNRGCRPNELTY-----------------------------------NAMIYGLCI 273
++ M+ G +P+E+TY + +I LC
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+G D+A L +M + G K +V T+ S++ GLC GK+D LR ++ N+ PDV +
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV----------------FRILV 377
+ +I+ F K GK EA L EM RG+ P ++N++ F ++V
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 378 ENG-------------------ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
G +D + L +++ +PN ++YNT++ G C + G++
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS-GKL 436
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
++L M+ G Y LL G C+ G + ++I +M +K R+
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM--QKSRM 486
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 40/266 (15%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ + N + A + F +V + PD+ TY+ +I YCK +++ ++F
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGC-EPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY------------ 264
++ K PN + YNT++ GFC+ G+L AK+ EM++RG P+ +TY
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 265 -----------------------NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
N +I+G+C +VD+A L + G K +V T+
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
M+ GLC G +A R + E PD +Y ++I ++ L++EM+ G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 362 LKPTVFSFNAVFRILVENGELDRAIL 387
+ V +L + LD++ L
Sbjct: 591 FSADSSTIKMVIDMLSDR-RLDKSFL 615
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 115 LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLY-------------SY 161
L +N++ D +SK + D I + +AK++++G L+ +Y
Sbjct: 366 LHEANQMFDLMVSKGCEP--DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N+L+ + + A+E F ++V V PP V TY ++ G C G + A ++F+ M
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGV-PPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 222 VKPNLLA---YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
L YN +I+G C ++++A + ++G +P+ +TYN MI GLC G +
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKG 305
EA ML KM+ +G + T+ +++
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRA 569
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 178/380 (46%), Gaps = 43/380 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+K D G V A+ F +A + + +Y +L+ L + A+ +++
Sbjct: 48 TTLMKGLCDAGRVVEALEHF-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIA 106
Query: 187 ENVVPPDVSTYTTMIRGYCKMGM------------------------------------I 210
P D T++T+I G CK G +
Sbjct: 107 RGCAP-DTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSV 165
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
E A KV V+ K P +L +N +INGFCK +L+ A K + M+ +GC PN T+ +
Sbjct: 166 ELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTIL 225
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC RV EA+ L+ KM G NV T+ +++ GLC G+ D A + + N
Sbjct: 226 ITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNC 285
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P+V ++ ++I+G CK + +EA L MR G P + ++N++ L ++ ++D A
Sbjct: 286 PPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQ 345
Query: 388 LLKQMPQMD-CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L + +P+ N V+Y+T+ G A GRM D + ++ G + D Y+ L+
Sbjct: 346 LFQTIPESGVSAANAVTYSTLFHGY-AALGRMADACRIFSMLVDKGFSPDLATYTSLILE 404
Query: 447 YCEEGNVENVMQIAHEMVTK 466
YC+ V+++ EM +K
Sbjct: 405 YCKTSRAVEVVELVEEMASK 424
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 169/321 (52%), Gaps = 11/321 (3%)
Query: 152 IENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
IE G ++++ L+ L + N + A++ ++V P+V TY+T+I G CK G
Sbjct: 211 IEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGC-SPNVVTYSTVINGLCKQGQ 269
Query: 210 IENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+++A ++F +M + PN++ +N +I+G CK +EEA++ + M GC P+ +TYN+
Sbjct: 270 VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 329
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKD-NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+I GLC + +VDEA L + +G N T+ ++ G +G+ A +++
Sbjct: 330 LIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK 389
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+PD+ +Y +I +CK ++ E + L++EM ++G P V + +AV L E +RA
Sbjct: 390 GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERA 449
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR---MQDVEDLVDRMIRSGHNLDFTMYSC 442
I L M C + + YN ++ G+ A + +E ++D+ R N +
Sbjct: 450 IQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRK-FNPSSSAVDA 508
Query: 443 LLKGYCEEGNVENVMQIAHEM 463
L++ C+ G ++ Q+ H+M
Sbjct: 509 LVESLCQVGRTDDAKQLLHKM 529
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 155/308 (50%), Gaps = 5/308 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y L+ + +A + ++ K N + +TT+++G C G + A + F
Sbjct: 10 FTYGILIRGFSSAGDLDIAIQLLEEM-KSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFR 68
Query: 219 VMT--VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P+++ Y +++ CK G+ +EA+ + EM+ RGC P+ +T++ +I GLC G
Sbjct: 69 AMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGS 128
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC-VVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++A ++ + G ++ + +++++ LC + A L V+ P V +
Sbjct: 129 EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFN 188
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+VINGFCK D A LL+ M +G P VF+F + L + + A LL++M
Sbjct: 189 LVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTG 248
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C PN V+Y+T+I GLC +G++ D +L M R + ++ L+ G C+ +E
Sbjct: 249 GCSPNVVTYSTVINGLC-KQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 307
Query: 456 VMQIAHEM 463
Q+ H M
Sbjct: 308 ARQLYHRM 315
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 130/272 (47%), Gaps = 38/272 (13%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN Y +I GF G+L+ A + + EM + G N + + ++ GLC GRV EA
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M + D V T+ +++ LC GKFD+A G LR ++ PD ++ +I+G CK
Sbjct: 67 FRAMAKDCAPD-VMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 344 IGKSDEAISLLKE------------------------------------MRARGLKPTVF 367
G ++A +L++ + A+G PTV
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
FN V + +LD A LL+ M + C+PN ++ +I GLC A R+ + + L+++
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKAN-RVGEAQQLLEK 244
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
M+ G + + YS ++ G C++G V++ ++
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYEL 276
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 155/332 (46%), Gaps = 7/332 (2%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
++ A +H+ ++ + +YNSL+ L + + A + F I + V + TY+
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 364
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
T+ GY +G + +A ++F ++ K P+L Y ++I +CK E + + EM ++
Sbjct: 365 TLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASK 424
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G P T +A++ GL + A L M G D+ + +++G+ K ++A
Sbjct: 425 GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKA 484
Query: 316 VGYLRNVMEA---NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+ L V++ NP + + ++ C++G++D+A LL +M RG V S+N +
Sbjct: 485 LAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGL 544
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L D A + + M P + N +I LC A ++ D +LV RM + G
Sbjct: 545 LSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSA-AKVDDAYELVQRMSKLG 603
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D + L+ GYC+ G + ++ EM
Sbjct: 604 CCPDIETCNTLIGGYCKSGRADLARKLLEEMT 635
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 114/214 (53%), Gaps = 1/214 (0%)
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
M R C PN+ TY +I G G +D A L+ +M+ NGF+ N H +++KGLC G+
Sbjct: 1 MARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRV 60
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+A+ + R M + PDV +Y +++ CK GK DEA +L+EM ARG P +F+ +
Sbjct: 61 VEALEHFR-AMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L + G ++A +L+ + Q + ++ TII LC ++ ++ +I G
Sbjct: 120 IDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG 179
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M++ ++ G+C+ ++++ ++ M+ K
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEK 213
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 163/332 (49%), Gaps = 27/332 (8%)
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
D G V+ I + + IE A + +Y L+ L I E F+++ NVV DV
Sbjct: 181 DDGRVQE-ILEIMENEGIE--ATVGTYTILVDSLSTARDISKVEALFNEMKANNVVG-DV 236
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
YT +I YC+ G + A KV D V+PN Y +I GFCK G++E A+ + +
Sbjct: 237 YLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLAD 296
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M +G N++ +N MI G C G VD+A + A M G + N+ T+ ++ GLC +G
Sbjct: 297 MQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGV 356
Query: 312 FDQAVGY-------------------LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
V Y R + E P V +Y V+I+G+ K G+ EA
Sbjct: 357 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAER 416
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
KEM +G P V+++ ++ NG++D A+ L ++M Q PN V+Y +I GL
Sbjct: 417 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLA 476
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
+GR + L D M+++G D ++YS L+
Sbjct: 477 -KEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 507
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 148/310 (47%), Gaps = 31/310 (10%)
Query: 91 TTPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWF 146
T YT + D L + IS +L +K +N + D ++ + +I AY GN++ A
Sbjct: 200 TVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVL 259
Query: 147 HQAKQIENGA--CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
+ + NG +Y L+ ++ ++ AE + + V + + TMI GY
Sbjct: 260 DEC--VGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQI-IFNTMIDGY 316
Query: 205 CKMGMIENAKKVFDVMT----------------------VKPNLLAYNTMINGFCKKGEL 242
C+ GM+++A K+ M V PN + Y T+I+ CK G++
Sbjct: 317 CRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDM 376
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA++ EM +G P+ LTY+ MI+G GR+ EA+ +M GF +V T+ S+
Sbjct: 377 VEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASL 436
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G CV GK D A+ + + P+V +Y +I+G K G+S+ A L +M GL
Sbjct: 437 VHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGL 496
Query: 363 KPTVFSFNAV 372
P ++A+
Sbjct: 497 IPDDSLYSAL 506
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 137/276 (49%), Gaps = 23/276 (8%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y Y +++ R +++ A + + V N V P+ TY +I+G+CK+G +E A+ +
Sbjct: 236 VYLYTAVINAYCRAGNMRRAAKVLDECVG-NGVEPNERTYGVLIKGFCKIGQMEAAEMLL 294
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG---------------CR- 258
M V N + +NTMI+G+C+KG +++A K M G CR
Sbjct: 295 ADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRM 354
Query: 259 ---PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
PN +TY +I C +G + EA+ L +M G +V T+ M+ G G+ +A
Sbjct: 355 GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREA 414
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ + + + PDV +Y +++G C GK D A+ L +EM+ RG +P V ++ A+
Sbjct: 415 ERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISG 474
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L + G + A L M + +P+ Y+ ++ L
Sbjct: 475 LAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 510
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 134/301 (44%), Gaps = 24/301 (7%)
Query: 191 PPDVSTY--TTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
P VS + + ++ G CK G +++A+++ D M V N L YN++++ + ++ +
Sbjct: 126 PGSVSPFAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRV 185
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ + M N G TY ++ L + + + L +M+ N +V + +++
Sbjct: 186 QEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINA 245
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G +A L + + P+ ++Y V+I GFCKIG+ + A LL +M+ +G+
Sbjct: 246 YCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLN 305
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM------------ 413
FN + G +D A+ + M ++ N +YNT+ CGLC
Sbjct: 306 QIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTT 365
Query: 414 ------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G M + L M G YS ++ GY ++G + + EM KK
Sbjct: 366 LISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEM-EKK 424
Query: 468 G 468
G
Sbjct: 425 G 425
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 118/235 (50%), Gaps = 20/235 (8%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
L+ + +I Y +G V A+ ++I +Y+YN+L L R+
Sbjct: 304 LNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMG-------- 355
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFC 237
V P+ TYTT+I +CK G + A+++F M K P++L Y+ MI+G+
Sbjct: 356 ---------VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYA 406
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
KKG + EA++ EM +G P+ TY ++++G C+NG+VD A L +M+ G + NV
Sbjct: 407 KKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVV 466
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ +++ GL G+ + A ++++A + PD Y ++ + D +S
Sbjct: 467 AYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDVKVS 521
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS---Y 404
D A+S L + R L ++ S R+ G L+RA + P VS
Sbjct: 84 DAAVSRLGSLDPRSLTFSLLSLRRAGRLADAAGLLERA---------LGSCPGSVSPFAA 134
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC---EEGNVENVMQI 459
+ ++ GLC + GR+ D L+D M R G +L+ Y+ LL Y ++G V+ +++I
Sbjct: 135 SVVVDGLCKS-GRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 191
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 150/277 (54%), Gaps = 6/277 (2%)
Query: 137 GNVKAAIFWFHQAKQI--ENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
G AA+ +F + + + E +Y++L+G L+ N++ +A E FH+ + E P D
Sbjct: 295 GRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSP-DA 353
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
Y TMI G + G +E+A + M K + AYN +I GFC+K L EA + + E
Sbjct: 354 IMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQE 413
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M G RP+ TYN ++ G C G L+ KM +G + +V T +++ G C VGK
Sbjct: 414 MKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGK 473
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
D+A+ LR++ E+ ++P+ Y +I+ CK G D AI L EM+ + + V +FNA
Sbjct: 474 IDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNA 533
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+ + L + ++A L+ QM + C P++V+ + ++
Sbjct: 534 LLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLM 570
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 162/350 (46%), Gaps = 45/350 (12%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++NS+L L RV + + + V PDV TY ++ G CK G + +A +V
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 218 DVMT-----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN--RGCRPNELTYNAMIYG 270
D M+ ++P+++ NT+++G CK G ++EA + + M+ GC PN +TYN +I
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR---------- 320
C G + A L+ KM G N+ T +++ GLC G+ A+ + R
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGK 315
Query: 321 -----------------NV----------MEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
NV M +PD Y +I+G + G+ ++A S+
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSM 375
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
M+ G K ++N + L A LL++M ++ P+ +YNT++ G C
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK 435
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
A G V++L+ +MI G + L+ GYC+ G ++ ++I M
Sbjct: 436 A-GDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSM 484
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 163/338 (48%), Gaps = 9/338 (2%)
Query: 137 GNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
G V+ A+ + Q +G +YN L+ RV +I +A E ++ E V P ++
Sbjct: 223 GRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGV-PQNI 281
Query: 195 STYTTMIRGYCKMGMIENAKKVF-DVMTVKP----NLLAYNTMINGFCKKGELEEAKKCM 249
T T++ G C+ G A + F + TV P N + Y+T++ + A +
Sbjct: 282 VTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELF 341
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+E M+ G P+ + Y MI GL GR+++A + + M+ GFK + + ++ G C
Sbjct: 342 HEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK 401
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ +A L+ + E + PDV +Y +++G CK G LL +M G +P+V +F
Sbjct: 402 KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF 461
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ + G++D A+ +L+ M + PN V YNT+I LC +G + +L D M
Sbjct: 462 GTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLC-KRGDVDLAIELFDEMK 520
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ T ++ LLKG ++ E ++ +M ++
Sbjct: 521 EKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREER 558
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 152/309 (49%), Gaps = 15/309 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI A+ GN+ A + +++EN + + N+++G L R A EFF +
Sbjct: 252 LIDAFCRVGNISMA---YELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE-- 306
Query: 186 KENVVPP---DVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
K V P + TY+T++ + A ++F + P+ + Y TMI+G +
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G LE+A + M G + + YN +I G C R+ EA L+ +M+ G + +V T+
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++L G C G F L +++ P V ++ +++G+CK+GK DEA+ +L+ M
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G+ P +N + L + G++D AI L +M + N ++N ++ GL K +
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL-RDKNMPE 545
Query: 420 DVEDLVDRM 428
+L+D+M
Sbjct: 546 KAFELMDQM 554
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 180/369 (48%), Gaps = 5/369 (1%)
Query: 98 ITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC 157
++D++ + + ++K+ S +KL+ A + I Q + +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+Y+ + R + + LA +++K PD+ T ++++ GYC I +A +
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M KP+ + T+I+G + EA +++M+ RGC+P+ +TY ++ GLC
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D A L+ KM + +V + +++ GLC D A+ + + PDV +Y
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+ C G+ +A LL +M R + P V +F+A+ V+ G+L A L +M +
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ +Y+++I G CM R+ + + + + MI + YS L+KG+C+ VE
Sbjct: 357 RSIDPDIFTYSSLINGFCM-HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 455 NVMQIAHEM 463
M++ EM
Sbjct: 416 EGMELFREM 424
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 144/264 (54%), Gaps = 10/264 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ V+ + AE+ + +++K ++ PD+ TY+++I G+C ++ AK +F++
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ Y+T+I GFCK +EE + EM RG N +TY +I+G
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+M+ +M G N+ T+ +L GLC GK +A+ + + M PD+ +Y +
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK GK ++ L + +G+ P V ++N + G + A LLK+M +
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 397 CLPNFVSYNTIICGLCMAKGRMQD 420
LPN +YNT+I + R++D
Sbjct: 569 PLPNSGTYNTLI------RARLRD 586
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 179/331 (54%), Gaps = 5/331 (1%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG++ A+ + ++ + A + YN+++ L + + A F ++ + + PDV
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI-RPDVF 294
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY+++I C G +A ++ M + PN++ ++ +I+ F K+G+L EA+K +EM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ R P+ TY+++I G C++ R+DEAK + M NV T+ +++KG C +
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
++ + R + + + + +Y +I+GF + D A + K+M + G+ P + ++N +
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L +NG+L +A+++ + + + P+ +YN +I G+C A G+++D +L + G
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA-GKVEDGWELFCNLSLKG 533
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ + Y+ ++ G+C +G+ E + +M
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 161/309 (52%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N LL + ++N +L Q+ + + D+ TY+ I +C+ + A V M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQM-QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+P+++ ++++NG+C + +A +++M+ G +P+ T+ +I+GL ++ +
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L+ +M G + ++ T+ +++ GLC G D A+ L+ + + + DV Y +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G CK D+A++L EM +G++P VF+++++ L G A LL M +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN V+++ +I + +G++ + E L D MI+ + D YS L+ G+C ++
Sbjct: 325 NPNVVTFSALIDAF-VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 458 QIAHEMVTK 466
+ M++K
Sbjct: 384 HMFELMISK 392
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 173/332 (52%), Gaps = 19/332 (5%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK-------NSNKLSD 123
AL F N P+ + Y+++ L ++ S A+ LL N N ++
Sbjct: 277 ALNLFTEMDNKGIRPDVF-----TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT- 330
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
S LI A+ G + A + + + +++Y+SL+ + + A+ F
Sbjct: 331 --FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKG 240
++ ++ P +V TY+T+I+G+CK +E ++F M+ + N + Y T+I+GF +
Sbjct: 389 MISKDCFP-NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ + A+ +M++ G PN LTYN ++ GLC NG++ +A ++ ++ + + ++ T+
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
M++G+C GK + N+ ++P+V +Y +I+GFC+ G +EA SLLK+M+
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
G P ++N + R + +G+ + + L+K+M
Sbjct: 568 GPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 5/231 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++L+ + ++ E F ++ + +V V TYTT+I G+ + +NA+ VF
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V PN+L YN +++G CK G+L +A + P+ TYN MI G+C G+
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L + L G NV + +M+ G C G ++A L+ + E P+ +Y
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + + L+KEMR+ G + V +L +G LD++ L
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSFL 628
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
E++ N I K D+A+ L +M P++ FN + + + + + I L +QM
Sbjct: 52 EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ + +Y+ I C + ++ ++ +M++ G+ D S LL GYC +
Sbjct: 112 LGISHDLYTYSIFINCFC-RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 455 NVMQIAHEMV 464
+ + + +MV
Sbjct: 171 DAVALVDQMV 180
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 181/409 (44%), Gaps = 40/409 (9%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
Y + + L I A L ++ + L+K + + + + K++
Sbjct: 226 YATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGW 285
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
+Y +++ R K AEE ++ ++ + P V T T +I YCK G + +A
Sbjct: 286 RPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPC-VVTCTAVINAYCKEGRMSDAL 344
Query: 215 KVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN----------- 260
+V ++M + KPN+ YN ++ GFC +G++ +A +N+M G P+
Sbjct: 345 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 404
Query: 261 ------------------------ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ TYNA+I LC +GR D+A L + G K N
Sbjct: 405 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 464
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T S++ GLC GK D A +L ++ A PD +Y I CK+ S E +S + E
Sbjct: 465 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 524
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M + +KP+ ++ V L++ +M C P+ V+Y T + C+ +G
Sbjct: 525 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI-EG 583
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
R+ + E+++ M ++G +D Y+ L+ G+ G ++ + I +M +
Sbjct: 584 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS 632
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 156/306 (50%), Gaps = 8/306 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+ SLL L R LA F + + P TY +IR C+ + A + +M
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+P+ +N++I G+C+ +++ A+ ++M RG + ++Y +I GLC GR+
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 239
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DEA L +M + ++ + +++KGLC + ++ + LR + E P ++Y V
Sbjct: 240 DEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 295
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++ C+ K+ EA +L+EM +GL P V + AV + G + A+ +L+ M C
Sbjct: 296 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 355
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +YN ++ G C +G++ L+++M G N D Y+ L++G C +G++E+
Sbjct: 356 KPNVWTYNALVQGFC-NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 414
Query: 458 QIAHEM 463
++ M
Sbjct: 415 RLLRLM 420
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 163/343 (47%), Gaps = 38/343 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++NSL+ R N + +A + F ++ DV +Y T+I G C+ G I+ A ++F
Sbjct: 189 YTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQ-DVVSYATLIEGLCEAGRIDEAVELFG 247
Query: 219 VMTVKPNLLAYNTMINGFC--KKGE---------------------------------LE 243
M +P++ Y ++ G C ++GE +
Sbjct: 248 EMD-QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAK 306
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA++ + EM +G P +T A+I C GR+ +A ++ M+L G K NV T+ +++
Sbjct: 307 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 366
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+G C GK +A+ L + +NPD +Y ++I G C G + A LL+ M GL
Sbjct: 367 QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 426
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+++NA+ L ++G D+A L + PN V++N++I GLC + G+
Sbjct: 427 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKS-GKADIAWK 485
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+++M+ +G D YS ++ C+ + + EM+ K
Sbjct: 486 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 528
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 169/395 (42%), Gaps = 63/395 (15%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I AY G + A+ K +++YN+L+ + A +++ +
Sbjct: 328 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM-R 386
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
V PD TY +IRG C G IE+A ++ +M + + YN +IN CK G +
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + + RG +PN +T+N++I GLC +G+ D A + KM G + T+ S +
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506
Query: 304 KGLCVVGKFDQAVGYLRNVMEANM-----------------------------------N 328
+ LC + + + ++ +++ ++ N
Sbjct: 507 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 566
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PDV +Y + +C G+ +EA ++L EM G+ ++N + G+ D A+ +
Sbjct: 567 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 626
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED--------------------LVDRM 428
LKQM + +PN +Y ++ L RM+ VED L D M
Sbjct: 627 LKQMTSVASVPNQFTYFILLRHLV----RMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM 682
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ + YS +L+G+ E+G E + M
Sbjct: 683 KKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLM 717
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 165/376 (43%), Gaps = 57/376 (15%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L++ + + G V A+ ++ + +YN L+ I+ A + +
Sbjct: 365 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 424
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
++ D TY +I CK G + A +FD + +KPN + +N++ING CK G+ + A
Sbjct: 425 LIA-DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIA 483
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLC------------------------INGRVDEAK 281
K + +M++ GC P+ TY++ I LC +N + K
Sbjct: 484 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 543
Query: 282 ML-----------MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
+L +M +G +V T+ + ++ C+ G+ ++A L + + + D
Sbjct: 544 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 603
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV------------- 377
+Y +++G IG++D A+S+LK+M + P F++ + R LV
Sbjct: 604 TMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTP 663
Query: 378 ----ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+ EL L M + + LPN +Y++I+ G GR ++ LV M
Sbjct: 664 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS-EDGRTEEATSLVSLMKEDSI 722
Query: 434 NLDFTMYSCLLKGYCE 449
+L+ +Y+ L+ +C+
Sbjct: 723 SLNEDIYTALVTCFCK 738
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 134/328 (40%), Gaps = 56/328 (17%)
Query: 140 KAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP------ 191
KA I W K + G Y+Y+S + L ++ + F ++++++V P
Sbjct: 479 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYT 538
Query: 192 ----------------------------PDVSTYTTMIRGYCKMGMIENAKKVFDVMT-- 221
PDV TYTT +R YC G + A+ V M+
Sbjct: 539 IVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN 598
Query: 222 -VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
V + +AYNT+++G G+ + A + +M + PN+ TY ++ L V++
Sbjct: 599 GVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDV 658
Query: 281 KMLMAK-----------------MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
L M+ N F N T+ S+L+G G+ ++A + +
Sbjct: 659 LPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK 718
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
E +++ + Y ++ FCK + +A L+ M G P + S+ + L+ G+ D
Sbjct: 719 EDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTD 778
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGL 411
+A + D P+ + + II GL
Sbjct: 779 KAKEIFMNSRWKDYSPDEIVWKVIIDGL 806
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 24/224 (10%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV--- 216
+YN+L+ + A Q+ VP + TY ++R +M ++E+ +
Sbjct: 606 AYNTLMDGHASIGQTDHAVSILKQMTSVASVP-NQFTYFILLRHLVRMRLVEDVLPLTPA 664
Query: 217 --------------FDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
FDVM PN Y++++ GF + G EEA ++ M
Sbjct: 665 GVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISL 724
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
NE Y A++ C + R +A +L+ M +GF + +++ +L GL G+ D+A
Sbjct: 725 NEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF 784
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSD---EAISLLKEMRAR 360
N + +PD ++V+I+G K G SD E I +L+ M R
Sbjct: 785 MNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCR 828
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 187/389 (48%), Gaps = 60/389 (15%)
Query: 156 ACLYSYNSLLGVLVRVNSIK-------LAEEFFHQIVKENV--VPPDVSTYTTMIRGYCK 206
A + ++N LL + RV+ + L F+++++E V PD+ TY+ +I +C+
Sbjct: 47 ASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCR 106
Query: 207 MGMIE-----------------------------NAKKVFDVMTV----------KPNLL 227
MG +E +AK++ + M + P+++
Sbjct: 107 MGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVV 166
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMN---RGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+YNT++ GFC + EEA + ++ M + R C PN ++Y +I G G+VD+A L
Sbjct: 167 SYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLF 226
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M G + NV T+ +++ GLC D+A G + +++ + PD +Y +I+G+ I
Sbjct: 227 LEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSI 286
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
GK E + +L+EM A GLKP +++ ++ L NG A M + PN Y
Sbjct: 287 GKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIY 346
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM- 463
+I G KG + ++ DL++ M+ +G + D +++ + Y ++ ++ M I ++M
Sbjct: 347 GILIHGYA-TKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMK 405
Query: 464 -------VTKKGRLLKLKNFLTRVVDALL 485
V G L+ L RV DA+L
Sbjct: 406 QQGLSPDVVNFGALIDALCKLGRVDDAVL 434
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 172/328 (52%), Gaps = 5/328 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A G V A+ F+Q ++ +NSL+ L V+ + A+EF+ +++ +
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ PDV + T++ C G + A+++ D+M +P++++Y T+I G C G ++EA
Sbjct: 479 I-RPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEA 537
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K ++ M++ G +P+E TYN +++G C GR+D+A + +M NG V T+ ++L G
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L +F +A N++ + ++ Y +++NG K DEA L + + ++ +
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +FN + L ++G + A+ L + +P+ +Y I L + +G +++ +DL
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENL-IEEGYLEEFDDLF 716
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
M +SG + M + L++ G++
Sbjct: 717 SAMEKSGTTPNSRMLNALVRRLLHRGDI 744
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 167/371 (45%), Gaps = 43/371 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
L+K + + + A+ H + +C + SY +++ + A F +++
Sbjct: 171 LLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMM 230
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ P+V TYTT+I G CK +++ A+ VF M VKP+ YN +I+G+ G+
Sbjct: 231 DRGI-QPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW 289
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+E + + EM G +P+ TY +++ LC NGR EA+ M G K NV+ + +
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGIL 349
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G G + L ++E ++PD + ++ + K DEA+ + +M+ +GL
Sbjct: 350 IHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGL 409
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF--------------------- 401
P V +F A+ L + G +D A+L QM PN
Sbjct: 410 SPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKE 469
Query: 402 --------------VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
V +NTI+C LC KG++ + L+D M R G D Y+ L+ G+
Sbjct: 470 FYFEMLNQGIRPDVVFFNTILCNLC-TKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGH 528
Query: 448 CEEGNVENVMQ 458
C G ++ +
Sbjct: 529 CLVGRIDEAAK 539
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 166/342 (48%), Gaps = 15/342 (4%)
Query: 137 GNVKAAIFWFHQA--KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK---ENVVP 191
G + A F+F K I+ +Y G+L+ + K A H ++ EN +
Sbjct: 322 GRCREARFFFDSMIRKGIKPNVAIY------GILIHGYATKGALSEMHDLLNLMVENGLS 375
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PD + + Y K MI+ A +F+ M + P+++ + +I+ CK G +++A
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLK 435
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
N+MMN G PN +N+++YGLC + ++AK +M G + +V ++L LC
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G+ +A + + PDV SY +I G C +G+ DEA L M + GLKP ++
Sbjct: 496 KGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWT 555
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + G +D A + ++M + P V+Y+TI+ GL + R + ++L M
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTR-RFSEAKELYLNM 614
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
I SG + +Y+ +L G + V+ ++ + +K +L
Sbjct: 615 ITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQL 656
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 182/389 (46%), Gaps = 10/389 (2%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLS--HSLISIAASLLKNSNKLSDFFISK 128
A FFF+ PN + + T LS H L+++ +++N +
Sbjct: 327 ARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNL---MVENGLSPDHHIFNI 383
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+ AY + + A+ F++ KQ + ++ +L+ L ++ + A F+Q++ E
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEG 443
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
V P ++ + +++ G C + E AK+ + M ++P+++ +NT++ C KG++ +A
Sbjct: 444 VAP-NIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKA 502
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ ++ M G RP+ ++Y +I G C+ GR+DEA + M G K + T+ ++L G
Sbjct: 503 QRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHG 562
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G+ D A G R ++ + P V +Y +++G + EA L M G +
Sbjct: 563 YCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWN 622
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++ +N + L +N +D A L + + D ++N +I G GR +D L
Sbjct: 623 IWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMI-GALFKSGRNEDAMHLF 681
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ G D Y + + EEG +E
Sbjct: 682 ATISSYGLVPDVFTYCLIAENLIEEGYLE 710
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 155/349 (44%), Gaps = 42/349 (12%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
N LL L ++ A + + + E PDV +Y T+++G+C E A ++ +M
Sbjct: 133 NQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192
Query: 221 -----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ PN+++Y T+INGF +G++++A EMM+RG +PN +TY +I GLC
Sbjct: 193 DSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
VD A+ + +M G K + T+ ++ G +GK+ + V L + + PD +Y
Sbjct: 253 VVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYG 312
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTV----------------------------- 366
++N C G+ EA M +G+KP V
Sbjct: 313 SLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN 372
Query: 367 ------FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
FN +F + +D A+ + +M Q P+ V++ +I LC GR+ D
Sbjct: 373 GLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKL-GRVDD 431
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
++M+ G + +++ L+ G C E + EM+ + R
Sbjct: 432 AVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 113/280 (40%), Gaps = 15/280 (5%)
Query: 91 TTPCYTAITDVLLSHSLIS----IAASL---LKNSNKLSDFFISKLIKAYGDRGNVKAAI 143
T P + T ++ H L+ A SL L K ++ + L+ Y G + A
Sbjct: 514 TRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY 573
Query: 144 FWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
F + + NG + +Y+++L L A+E + ++ ++ Y ++
Sbjct: 574 GVFRE--MLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK-QWNIWIYNIIL 630
Query: 202 RGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
G K ++ A K+F + K + +N MI K G E+A + + G
Sbjct: 631 NGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLV 690
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P+ TY + L G ++E L + M +G N ++++ L G +A Y
Sbjct: 691 PDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAY 750
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
L + E N + + + ++I+ + A SL ++ R
Sbjct: 751 LSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYR 790
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 173/336 (51%), Gaps = 8/336 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + L+K D + A+ H G + SY +++ + A
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+H+++ ++P DV TY ++I CK ++ A +V + M V P+ + YN++++G+C
Sbjct: 219 YHEMLDRGILP-DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G+ +EA + +M + G P+ +TY+ ++ LC NGR EA+ + M G K ++
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++L+G G + G L ++ ++PD + ++I + K GK D+A+ + +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
R +GL P ++ AV IL ++G ++ A+L +QM P + YN++I GLC +
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN-K 456
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ E+L+ M+ G L+ ++ ++ +C+EG V
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 158/307 (51%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS+L K A F ++ + + V PDV TY+ ++ CK G A+K+FD
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT +KP + Y T++ G+ KG L E ++ M+ G P+ ++ +I G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A ++ +KMR G N T+ +++ LC G+ + A+ Y +++ ++P Y
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C K + A L+ EM RG+ FN++ + G + + L + M ++
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN ++YNT+I G C+A G+M + L+ M+ G + YS L+ GYC+ +E+
Sbjct: 507 VKPNVITYNTLINGYCLA-GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 457 MQIAHEM 463
+ + EM
Sbjct: 566 LVLFKEM 572
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 164/314 (52%), Gaps = 6/314 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKE--NVVPPDVSTYTTMIRGYCKMGMIENAKK 215
++SYN LL L N + A E H + + PPDV +YTT+I G+ K G + A
Sbjct: 158 VFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 216 VFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ M + P+++ YN++I CK +++A + +N M+ G P+ +TYN++++G C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+G+ EA + KMR +G + +V T+ ++ LC G+ +A ++ + + P++
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y ++ G+ G E LL M G+ P + F+ + + G++D+A+L+ +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
Q PN V+Y +I LC + GR++D ++MI G + +Y+ L+ G C
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKS-GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 453 VENVMQIAHEMVTK 466
E ++ EM+ +
Sbjct: 457 WERAEELILEMLDR 470
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 215/463 (46%), Gaps = 57/463 (12%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P Y Y ++ H L+ + +++N + S LI AY +G V A
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + +Q +Y +++G+L + ++ A +F Q++ E + P ++ Y ++I
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI-VYNSLIH 449
Query: 203 G-----------------------------------YCKMGMIENAKKVFDVMT---VKP 224
G +CK G + ++K+F++M VKP
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N++ YNT+ING+C G+++EA K ++ M++ G +PN +TY+ +I G C R+++A +L
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M +G ++ T+ +L+GL + A + E+ ++ +Y ++++G CK
Sbjct: 570 KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
+D+A+ + + + LK +FN + L++ G D A L +PN+ +Y
Sbjct: 630 KLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ + + +G +++++ L M +G +D M + +++ + G +
Sbjct: 690 RLMAENI-IGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE-----------I 737
Query: 465 TKKGRLLKL---KNFLTRVVDALLLMWIVTGGSWISRFVFVHQ 504
T+ G L + K+F A L + +++GG + + F+ +
Sbjct: 738 TRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFLPE 780
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 163/367 (44%), Gaps = 56/367 (15%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRG 203
F + + GA +Y N L + R +S A ++++ + V PD+ TY +I
Sbjct: 38 FDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIGC 96
Query: 204 YCKMGMIENA--------KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK-CMNEMMN 254
C+ G ++ KK F V + +A+ ++ G C +A + M
Sbjct: 97 CCRAGRLDLGFAALGNVIKKGFRV-----DAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR-----------------LNGFKD--- 294
GC PN +YN ++ GLC R EA L+ M +NGF
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 295 ------------------NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+V T+ S++ LC D+A+ L +++ + PD +Y
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G+C G+ EAI LK+MR+ G++P V +++ + L +NG A + M +
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P +Y T++ G KG + ++ L+D M+R+G + D ++S L+ Y ++G V+
Sbjct: 332 LKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 457 MQIAHEM 463
M + +M
Sbjct: 391 MLVFSKM 397
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 37/143 (25%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PD+ +Y ++I C+ G+ D + L + +G + +F + +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK------------ 130
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV-DRMIRSGHNLDFTMYSCLLK 445
GLC K R D D+V RM G + Y+ LLK
Sbjct: 131 -----------------------GLCADK-RTSDAMDIVLRRMTELGCIPNVFSYNILLK 166
Query: 446 GYCEEGNVENVMQIAHEMVTKKG 468
G C+E + +++ H M +G
Sbjct: 167 GLCDENRSQEALELLHMMADDRG 189
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 163/319 (51%), Gaps = 5/319 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + + G ++ A F + ++ A +Y Y S++ R ++K A F ++ +
Sbjct: 301 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 360
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEA 245
++P TY +I G CK G +E A+ + + M K N + +NT+I+G+C+ G ++EA
Sbjct: 361 LIPS-AHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEA 419
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M +G + YN++ GLC R DEAK L+ M G N + +++
Sbjct: 420 LRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDI 479
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G F +A R + E P++ +Y V+I+G+ K G EA L E+ RGL P
Sbjct: 480 YCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPD 539
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V++ ++ +G++D A+ L +MPQ +PN V+Y +I GL GR ++ L
Sbjct: 540 VYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLS-KDGRSEEAFKLY 598
Query: 426 DRMIRSGHNLDFTMYSCLL 444
D M +G D T+YS L+
Sbjct: 599 DEMKETGLTPDDTVYSSLV 617
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 169/359 (47%), Gaps = 17/359 (4%)
Query: 117 NSNKLSDFFISKLIKAYGDRGNVKAAIFWF-HQAKQ---IENGACLYSYNSLLGVLVRVN 172
N K + F L + Y D A+ F H K+ I+ +CL L L R
Sbjct: 149 NRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLV----YLLALRRGG 204
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTY--TTMIRGYCKMGMIENAKKVFDVMT---VKPNLL 227
+ FF ++V +V +V+ Y T ++ G CK G +E +K+ D + VK N++
Sbjct: 205 QVDSCLRFFRRMVNLDV---EVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVV 261
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YN I G+ K+ +L + + M G N +TY +I+G G+++EA+ L +M
Sbjct: 262 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 321
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
R G + +V + S++ C G +A+ + + + P +Y +I+G CK G+
Sbjct: 322 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQM 381
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
+ A L+ EM+ +G+ FN + E+G +D A+ L M + + +YN+I
Sbjct: 382 EAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSI 441
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GLC R + + L+ M+ G + + ++ L+ YC+EGN ++ EM K
Sbjct: 442 ASGLCKLN-RKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEK 499
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 4/282 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
GNVK A+ F + ++Y +L+ + + ++ A+ +++ + + V
Sbjct: 344 GNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPV-I 402
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ T+I GYC+ GM++ A ++ VM K ++ AYN++ +G CK +EAK + M+
Sbjct: 403 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 462
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG PN +++ +I C G EAK + +M G N+ T+ ++ G G
Sbjct: 463 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 522
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A + + PDV + +I+G C GK D A+ L EM RGL P V ++ A+
Sbjct: 523 EAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMI 582
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
L ++G + A L +M + P+ Y++++ L A+
Sbjct: 583 SGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSAE 624
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 163/387 (42%), Gaps = 81/387 (20%)
Query: 158 LYSYNSLLGVLVRVNSIKLAE---EFFHQIVKENVVPPDVSTYTTMI------------- 201
L S NS L+ N I AE +FFH +++N PD+ Y T+I
Sbjct: 49 LSSLNSQTVHLILSNHILTAESCLDFFH-FIRKNYYKPDLRAYITLIFKLYRSRKSDKLH 107
Query: 202 --RGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAK------------- 246
+ + ++ + N V D + V ++A ++++ C + + AK
Sbjct: 108 KSQKFAEIRHLFNCAAVDDGLRVPVTVIA--SLVDDACNESKCNRAKFKEKFFDLLFRVY 165
Query: 247 ----------KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ M +G +E + + L G+VD +M + V
Sbjct: 166 ADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTV 225
Query: 297 STHKSMLKGLCVVGKFD---------QAVGYLRNVMEAN--------------------- 326
+ +L GLC G + A G NV+ N
Sbjct: 226 YSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL 285
Query: 327 -----MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ +V +Y ++I+GF IGK +EA L +EMR +G++ V+ + ++ +G
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 345
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+ RA++L +M +P+ +Y +I G+C A G+M+ + LV+ M G +L+ +++
Sbjct: 346 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA-GQMEAAQMLVNEMQGKGIDLNPVIFN 404
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKG 468
L+ GYCE G V+ +++ ++ KKG
Sbjct: 405 TLIDGYCESGMVDEALRL-QVVMEKKG 430
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 159/299 (53%), Gaps = 8/299 (2%)
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYN 230
I LA F I+K PD T T+I+G C G I+ D + + + ++Y
Sbjct: 109 ITLAFSVFANILKRGF-HPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYG 167
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
T+ING CK GE + + + ++ +P+ + YN +I LC N + +A + ++M +
Sbjct: 168 TLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVK 227
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS--- 347
G +V T+ +++ G C++GK +A L + N+NPDV ++ V+I+ K GK
Sbjct: 228 GISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMV 287
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
DEA+SL +EM+ + + P + ++N++ L +N L+RAI LLK+M + P+ SY +
Sbjct: 288 DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTIL 347
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ GLC GR++ ++ ++ G +L+ Y+ ++ G C+ G M + +M K
Sbjct: 348 LDGLCKG-GRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGK 405
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 166/332 (50%), Gaps = 12/332 (3%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
S+ A++LK ++ LIK RG +K +++ Q + G L SY +L+
Sbjct: 114 SVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQV--VAQGFQLDQVSYGTLIN 171
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
L + K ++ + + V PDV Y T+I CK ++ +A V+ M VK
Sbjct: 172 GLCKAGETKAVARLLRKL-EGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGIS 230
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR---VDEA 280
P+++ Y T+I+GFC G+++EA +NEM + P+ T++ +I L G+ VDEA
Sbjct: 231 PDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEA 290
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
L +M+ ++ T+ S++ GLC ++A+ L+ + E + PDV SY ++++G
Sbjct: 291 MSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDG 350
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CK G+ + A + + +G V+ +N + L + G A+ L +M C+PN
Sbjct: 351 LCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPN 410
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+++ TIIC L K E ++ MI G
Sbjct: 411 AITFRTIICALS-EKDENDKAEKILREMIARG 441
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 160/318 (50%), Gaps = 8/318 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+ +N++L LV+ F Q + N + PD+ T + +I +C I A VF
Sbjct: 59 FLFNNILSSLVKNKRYPTVISLFKQF-EPNGITPDLCTLSILINCFCHQAHITLAFSVFA 117
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ + P+ + NT+I G C +GE+++ ++++ +G + ++++Y +I GLC G
Sbjct: 118 NILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAG 177
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
L+ K+ + K +V + +++ LC A ++ ++PDV +Y
Sbjct: 178 ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYT 237
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE---LDRAILLLKQM 392
+I+GFC +GK EA SLL EM+ + + P V++F+ + L + G+ +D A+ L ++M
Sbjct: 238 TLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEM 297
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ +P+ V+YN++I GLC ++ L+ M G D Y+ LL G C+ G
Sbjct: 298 KHKNMIPDIVTYNSLIDGLC-KNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGR 356
Query: 453 VENVMQIAHEMVTKKGRL 470
+E + ++ K L
Sbjct: 357 LEIAKEFFQHLLVKGCHL 374
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 128/296 (43%), Gaps = 11/296 (3%)
Query: 181 FHQIVKENVVPP----DVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMI 233
F + ++ ++ PP + T T + + + +A F++M + P +N ++
Sbjct: 6 FLRTLRLSLFPPYPPIAIPTATLHYQSHSQPHYHHHAVASFNLMLLMRPPPPTFLFNNIL 65
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+ K + G P+ T + +I C + A + A + GF
Sbjct: 66 SSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFH 125
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ T +++KGLC G+ + + + V+ D SY +ING CK G++ L
Sbjct: 126 PDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARL 185
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
L+++ +KP V +N + L +N L A + +M P+ V+Y T+I G C+
Sbjct: 186 LRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCI 245
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN---VENVMQIAHEMVTK 466
G+M++ L++ M N D +S L+ +EG V+ M + EM K
Sbjct: 246 M-GKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHK 300
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 169/339 (49%), Gaps = 6/339 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + + G ++ A F + ++ A +Y Y S++ R ++K A F ++ +
Sbjct: 305 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 364
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEA 245
++P TY +I G CK G +E A+ + + M K N + +NT+I+G+C+ G ++EA
Sbjct: 365 LIPS-AHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEA 423
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M +G + YN++ GLC R DEAK L+ M G N + +++
Sbjct: 424 LRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDI 483
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G F +A R + E P++ +Y V+I+G+ K G EA L E+ RGL P
Sbjct: 484 YCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPD 543
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V++ ++ +G++D A+ L +MPQ +PN V+Y +I GL GR ++ L
Sbjct: 544 VYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLS-KDGRSEEAFKLY 602
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D M +G D T+YS L+ G + MQI V
Sbjct: 603 DEMKETGLTPDDTVYSSLV-GSLHSADESISMQIQGSQV 640
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 169/359 (47%), Gaps = 17/359 (4%)
Query: 117 NSNKLSDFFISKLIKAYGDRGNVKAAIFWF-HQAKQ---IENGACLYSYNSLLGVLVRVN 172
N K + F L + Y D A+ F H K+ I+ +CL L L R
Sbjct: 153 NRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLV----YLLALRRGG 208
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTY--TTMIRGYCKMGMIENAKKVFDVMT---VKPNLL 227
+ FF ++V +V +V+ Y T ++ G CK G +E +K+ D + VK N++
Sbjct: 209 QVDSCLRFFRRMVNLDV---EVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVV 265
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YN I G+ K+ +L + + M G N +TY +I+G G+++EA+ L +M
Sbjct: 266 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 325
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
R G + +V + S++ C G +A+ + + + P +Y +I+G CK G+
Sbjct: 326 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQM 385
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
+ A L+ EM+ +G+ FN + E+G +D A+ L M + + +YN+I
Sbjct: 386 EAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSI 445
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GLC R + + L+ M+ G + + ++ L+ YC+EGN ++ EM K
Sbjct: 446 ASGLCKLN-RKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEK 503
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 163/387 (42%), Gaps = 81/387 (20%)
Query: 158 LYSYNSLLGVLVRVNSIKLAE---EFFHQIVKENVVPPDVSTYTTMI------------- 201
L S NS L+ N I AE +FFH +++N PD+ Y T+I
Sbjct: 53 LSSLNSQTVHLILSNHILTAESCLDFFH-FIRKNYYKPDLRAYITLIFKLYRSRKSDKLH 111
Query: 202 --RGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAK------------- 246
+ + ++ + N V D + V ++A ++++ C + + AK
Sbjct: 112 KSQKFAEIRHLFNCAAVDDGLRVPVTVIA--SLVDDACNESKCNRAKFKEKFFDLLFRVY 169
Query: 247 ----------KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ M +G +E + + L G+VD +M + V
Sbjct: 170 ADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTV 229
Query: 297 STHKSMLKGLCVVGKFD---------QAVGYLRNVMEAN--------------------- 326
+ +L GLC G + A G NV+ N
Sbjct: 230 YSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL 289
Query: 327 -----MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ +V +Y ++I+GF IGK +EA L +EMR +G++ V+ + ++ +G
Sbjct: 290 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 349
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+ RA++L +M +P+ +Y +I G+C A G+M+ + LV+ M G +L+ +++
Sbjct: 350 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA-GQMEAAQMLVNEMQGKGIDLNPVIFN 408
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKG 468
L+ GYCE G V+ +++ ++ KKG
Sbjct: 409 TLIDGYCESGMVDEALRL-QVVMEKKG 434
>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 481
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSAKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG +G V+ ++ F + +++ + SY++L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKQGIVQESVKLFDRMEELGVERTIKSYDALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ +I G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++ EA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMXEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGHL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAASDVLKAM----IRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKVIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
M V AY++++ + KK E +AK ++ M+ P+ + +++
Sbjct: 429 MLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSALFRSVM 480
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 196/402 (48%), Gaps = 13/402 (3%)
Query: 68 PYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL---KNSNKLSDF 124
P ALF+FN P + + + +L+ + A + K + KL +
Sbjct: 111 PEQALFYFNQMIGRGLVPG-----SNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVY 165
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+IK + G + Q +++ + Y +L+ + I+ ++ F+++
Sbjct: 166 SFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKM 225
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
+ +VV + TYT +I G+ KMG+ ++ ++++ M + PN+ YN+MI C G+
Sbjct: 226 GELDVVA-NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGK 284
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L A + +EM RG N +TYN +I GLC RV EA+ LM +M+ +G N+ ++ +
Sbjct: 285 LNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNT 344
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C +G D+A + + +P + +Y ++I GF + S +++EM ARG
Sbjct: 345 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 404
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L P+ ++ + LV + +++A + M + + + Y +I GLC+ G M++
Sbjct: 405 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVV-GDMKEA 463
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L + + +Y+ ++ GYC+EG+ +++ EM
Sbjct: 464 SKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEM 505
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 147/288 (51%), Gaps = 10/288 (3%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G + A F + ++ + +YN+L+G L + + AE ++ K + + P++ +
Sbjct: 283 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRM-KRDGLSPNLIS 341
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y T+I GYC +G ++ A +F+ M P+L YN +I GF + + EM
Sbjct: 342 YNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREME 401
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG P+++TY ++ L + +++A + + M G ++ + ++ GLCVVG
Sbjct: 402 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMK 461
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A +++ E ++ P+ Y +I G+CK G S A+ LLKEM G+ P V S+N+
Sbjct: 462 EASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 521
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+IL ++ + A +LLK M ++ P+ +N I +K R +V
Sbjct: 522 QILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI------SKARFDNV 563
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 146/307 (47%), Gaps = 5/307 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G K I + + K +Y+YNS++ + A E F ++ +E
Sbjct: 240 LINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM-RER 298
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V +V TY T+I G C+ + A+++ M + PNL++YNT+I+G+C G L++A
Sbjct: 299 GVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKA 358
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
N+M + G P+ TYN +I G ++ +M G + T+ ++
Sbjct: 359 SSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDA 418
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L ++A ++ +A + D+ Y V+I+G C +G EA L K + LKP
Sbjct: 419 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPN 478
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+N + + G RA+ LLK+M + +PN SYN+ I LC + + + E L+
Sbjct: 479 DVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDE-KWTEAEVLL 537
Query: 426 DRMIRSG 432
MI G
Sbjct: 538 KDMIELG 544
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 164/349 (46%), Gaps = 13/349 (3%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
SD +S L+ RG++ AA+ + + + A N L+ L R AE
Sbjct: 74 SDRRLSALVH----RGDLDAALRLVESSPRPPDAAL---ANRLVRDLCRRGRPDDAE--- 123
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGE 241
++V V Y + GYC+ G + +A++V M V+PN YN +I+ C++G+
Sbjct: 124 -RVVGACGPAATVVAYGALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQ 182
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ +A +++M+ RGC P+ +TYN ++ C +A L+ MR G N T+
Sbjct: 183 VRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNV 242
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G+C G D A+ LRN+ P +Y V+ G C + +A L+ EM
Sbjct: 243 LMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLREN 302
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P +FN V L G L +AI LL++M + C N V+YN II GLC + +
Sbjct: 303 CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQR-NVDGA 361
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
L+ +M G D Y+ LLKG C + ++ M T+ G L
Sbjct: 362 MGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNM-TQNGCL 409
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 162/343 (47%), Gaps = 6/343 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + LI +RG V+ A+ + +YN LL + + A E
Sbjct: 168 YTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDL 227
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ E P +V TY ++ G C G +++A ++ + KP+ + YNT++ G C
Sbjct: 228 MRAEGCTPNNV-TYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAE 286
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+A + + EM+ C PNE T+N +IY LC G + +A L+ KM +G N+ T+
Sbjct: 287 RWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYN 346
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ GLC D A+G L + PD+ +Y ++ G C + +A L+ M
Sbjct: 347 AIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQN 406
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G P +FN + L + G + AI + KQMP C PN ++Y+TII GL A Q
Sbjct: 407 GCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQA 466
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+E L + M G N D +Y L + ++ +E +Q ++
Sbjct: 467 LE-LFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKL 507
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 147/304 (48%), Gaps = 41/304 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L L A+E ++++EN PP+ +T+ +I C+ G+++ A ++ +
Sbjct: 274 NYNTVLKGLCSAERWGDADELVTEMLRENC-PPNEATFNVVIYSLCRKGLLQQAIQLLEK 332
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ N++ YN +ING C++ ++ A +++M + GC+P+ +TYN ++ GLC +
Sbjct: 333 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQ 392
Query: 277 VDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+A+ LM M NG DNV T +++ LC G A+ + + + P+ +Y
Sbjct: 393 WVDAEELMDNMTQNGCLPDNV-TFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYS 451
Query: 336 VVINGFCKIGKSDEAISLLKEM----------------------------------RARG 361
+I+G K K D+A+ L EM + G
Sbjct: 452 TIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSG 511
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P +NA+ L NG+ + AI ++ M C+P+ ++Y +I GL +G + +
Sbjct: 512 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAY-EGYLNEA 570
Query: 422 EDLV 425
+L+
Sbjct: 571 RELL 574
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 135/268 (50%), Gaps = 5/268 (1%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
+G ++ AI + + A + +YN+++ L ++ A ++ K PD+
Sbjct: 320 KGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM-KSYGCKPDIV 378
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY T+++G C +A+++ D MT P+ + +NT+I C+KG + +A + +M
Sbjct: 379 TYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQM 438
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
++GC PN +TY+ +I GL ++D+A L +M GF + ++ + + L
Sbjct: 439 PDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTI 497
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
++A+ +R + ++ ++P Y ++ G C+ GK++ AI ++ M + G P ++ +
Sbjct: 498 EEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVIL 557
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPN 400
L G L+ A LL ++ D L N
Sbjct: 558 IEGLAYEGYLNEARELLIKLCSRDVLVN 585
>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g13630
Length = 826
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y++++ L R ++ A F + + + P V ++ +++ GYCK+G ++ AK F
Sbjct: 230 HTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 288
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ + P++ ++N +ING C G + EA + ++M G P+ +TYN + G + G
Sbjct: 289 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 348
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD-VKSY 334
+ A ++ M G +V T+ +L G C +G D + L++++ + +
Sbjct: 349 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 408
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+++G CK G+ DEA+SL +M+A GL P + +++ V L + G+ D A+ L +M
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
LPN ++ ++ GLC KG + + L+D +I SG LD +Y+ ++ GY + G +E
Sbjct: 469 KRILPNSRTHGALLLGLC-QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 527
Query: 455 NVMQI 459
+++
Sbjct: 528 EALEL 532
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 136/282 (48%), Gaps = 5/282 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP----NLLAYNTMINGFCKKGELEEA 245
+ PDV TYT ++ G C++G I+ + M + +++ + M++G CK G ++EA
Sbjct: 365 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 424
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
N+M G P+ + Y+ +I+GLC G+ D A L +M N TH ++L G
Sbjct: 425 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 484
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G +A L +++ + D+ Y +VI+G+ K G +EA+ L K + G+ P+
Sbjct: 485 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 544
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V +FN++ + + A +L + P+ VSY T++ G + +++L
Sbjct: 545 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC-GNTKSIDELR 603
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
M G YS + KG C EN + E + +K
Sbjct: 604 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 645
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 168/346 (48%), Gaps = 19/346 (5%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G + A+ F+Q K L +Y+ ++ L ++ +A + ++ + ++P + T
Sbjct: 419 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP-NSRT 477
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ ++ G C+ GM+ A+ + D + +++ YN +I+G+ K G +EEA + ++
Sbjct: 478 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 537
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G P+ T+N++IYG C + EA+ ++ ++L G +V ++ +++ G
Sbjct: 538 ETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN-T 596
Query: 314 QAVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKE------------MRAR 360
+++ LR M+A + P +Y V+ G C+ K + +L+E M +
Sbjct: 597 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 656
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+ P ++N + + L L A + L+ M + + +YN +I LC+ G ++
Sbjct: 657 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY-GYIRK 715
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + + +L Y+ L+K +C +G+ E +++ H+++ +
Sbjct: 716 ADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 761
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 144/314 (45%), Gaps = 32/314 (10%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ + I+ A E F ++V E + P V+T+ ++I GYCK I A+K+ DV+
Sbjct: 513 YNIVIDGYAKSGCIEEALELF-KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 571
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC----- 272
+ P++++Y T+++ + G + + EM G P +TY+ + GLC
Sbjct: 572 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 631
Query: 273 ------INGRV-DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+ R+ ++ K + M G + T+ ++++ LC V A +L +
Sbjct: 632 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 691
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
N++ +Y ++I+ C G +A S + ++ + + + F++ + + G+ + A
Sbjct: 692 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 751
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLC---------------MAKGRMQDVEDLVDRMIR 430
+ L Q+ + Y+ +I LC +++G D+ D+ + MI+
Sbjct: 752 VKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL-DICEVMIK 810
Query: 431 SGHNLDFTMYSCLL 444
S L +T+ LL
Sbjct: 811 SDELLSWTIKWGLL 824
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 116/237 (48%), Gaps = 9/237 (3%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+YN+++ F + ++ + K + + NE TY+ ++ GLC ++++A + +
Sbjct: 203 SYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTS 255
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+V + S++ G C +G D A + V++ + P V S+ ++ING C +G
Sbjct: 256 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 315
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
EA+ L +M G++P ++N + + G + A +++ M P+ ++Y +
Sbjct: 316 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 375
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM-YSCLLKGYCEEGNVENVMQIAHEM 463
+CG C G + L+ M+ G L+ + S +L G C+ G ++ + + ++M
Sbjct: 376 LCGQCQL-GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 431
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N T+ +++ GLC K + AV +LR ++ P V S+ +++G+CK+G D A S
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 287
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG---L 411
+ GL P+V+S N + L G + A+ L M + P+ V+YN + G L
Sbjct: 288 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 347
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M G + + D++D+ G + D Y+ LL G C+ GN++ + + +M+++
Sbjct: 348 GMISGAWEVIRDMLDK----GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 398
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 20/238 (8%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
SY +L+ + K +E ++ E + P +V TY+ + +G C+ EN V
Sbjct: 582 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV-TYSVIFKGLCRGWKHENCNHVLRE 640
Query: 218 -------------DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
+ + P+ + YNT+I C+ L A + M +R + TY
Sbjct: 641 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 700
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I LC+ G + +A + ++ + + +++K CV G + AV ++
Sbjct: 701 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 760
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
N ++ Y VIN C+ +E+ M ++G+ P + + +++++ EL
Sbjct: 761 RGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL----DICEVMIKSDEL 814
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 173/338 (51%), Gaps = 5/338 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y +G KAA G + +YN + L R +S + ++ N
Sbjct: 216 LLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCR-DSRSAKGYLLLKRMRRN 274
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEA 245
+V P+ TY T+I G+ + G IE A KVFD M++ PN + YNT+I G C G + EA
Sbjct: 275 MVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEA 334
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M+ M++ G RPNE+TY A++ GL N ++ +MR+ G + + ++ +M+ G
Sbjct: 335 LRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDG 394
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G ++AV L ++++ ++NPDV ++ V+INGF ++GK + A ++ +M GL P
Sbjct: 395 LCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPN 454
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++ + + G L A+ M + + + N ++ C G++++ E +
Sbjct: 455 GILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFC-RYGKLEEAEYFM 513
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ M R G + + + C++ GY G+ + +M
Sbjct: 514 NHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKM 551
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 155/309 (50%), Gaps = 5/309 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ N +LG LV+ + + FF ++ + + P DV+T+ ++ C+ G +NA +
Sbjct: 140 VYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICP-DVATFNILLNALCERGKFKNAGFLL 198
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V P + YNT++N +CKKG + A + ++ M ++G + TYN I LC +
Sbjct: 199 RKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRD 258
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R + +L+ +MR N N T+ +++ G GK + A + N+ P+ +Y
Sbjct: 259 SRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITY 318
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G C G EA+ L+ M + GL+P ++ A+ L +N E +L++M
Sbjct: 319 NTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRM 378
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ +SY +I GLC G +++ L+D M++ N D +S L+ G+ G +
Sbjct: 379 GGVRVSHISYTAMIDGLC-KNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKIN 437
Query: 455 NVMQIAHEM 463
N +I +M
Sbjct: 438 NAKEIMCKM 446
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 158/344 (45%), Gaps = 40/344 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ VR I++A + F ++ N++P + TY T+I G+C G I A ++ DV
Sbjct: 282 TYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSI-TYNTLIAGHCTTGNIGEALRLMDV 340
Query: 220 MT---VKPN-----------------------------------LLAYNTMINGFCKKGE 241
M ++PN ++Y MI+G CK G
Sbjct: 341 MVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGM 400
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
LEEA + +++M+ P+ +T++ +I G G+++ AK +M KM G N + +
Sbjct: 401 LEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYST 460
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ C +G +A+ + + D + V++ FC+ GK +EA + M G
Sbjct: 461 LIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMG 520
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L P +F+ + +G+ +A + +M P+ +Y ++ GLC+ G + +
Sbjct: 521 LDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIG-GHINEA 579
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
R+ + +D +++ L C GN+ + + + +EMVT
Sbjct: 580 LKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVT 623
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 156/348 (44%), Gaps = 6/348 (1%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
S F L+K G++ A+ +FH+ + I N +N+ L R ++ A
Sbjct: 559 SLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALI 618
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFC 237
+++V + +P D TYT +I G CK G I A K + + PN Y ++++G
Sbjct: 619 NEMVTNDFLP-DNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLL 677
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G A EM+N+ P+ + +N +I G+ + +++ M+ N++
Sbjct: 678 KHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLA 737
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +L G + ++++ PD S+ +I G+C+ D AI +L+ +
Sbjct: 738 TYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWI 797
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
G F+FN + E E+ +A L+KQM Q +PN +YN + GL +
Sbjct: 798 TLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGL-IRTSD 856
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
++ ++ SG Y L+ G C GN++ M++ EM T
Sbjct: 857 FHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKT 904
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 203/470 (43%), Gaps = 56/470 (11%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y A+ + L ++ + +S+L+ ++S + +I G ++ A+
Sbjct: 353 YGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDML 412
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
++ + +++ L+ RV I A+E ++ K +VP + Y+T+I YCKMG +
Sbjct: 413 KVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGI-LYSTLIYNYCKMGYL 471
Query: 211 ENAKKVFDVMTVKPNLLAY---NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A + VM ++ + N ++ FC+ G+LEEA+ MN M G PN +T++ +
Sbjct: 472 KEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCI 531
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY---LRNVME 324
I G +G +A + KM G ++ T+ +LKGLC+ G ++A+ + LR +
Sbjct: 532 INGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPN 591
Query: 325 ANMN--------------------------------PDVKSYEVVINGFCKIGKSDEAIS 352
A N PD +Y +I G CK GK A+
Sbjct: 592 AVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALL 651
Query: 353 LLKEMRARG-LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L + +G L P + ++ L+++G A+ + ++M D P+ V++N II
Sbjct: 652 LSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQY 711
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL- 470
KG+ V D++ M + Y+ LL GY + + + +M+ + G L
Sbjct: 712 S-RKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMI-RHGFLP 769
Query: 471 -------LKLKNFLTRVVDAL--LLMWIVTGGSWISRFVFVHQVVVIMER 511
L L ++ D +L WI G I RF F + ER
Sbjct: 770 DKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCER 819
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 170/399 (42%), Gaps = 49/399 (12%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS-----YN 162
I++ ++ N +F + LI +G + AA+ K IE G L S Y
Sbjct: 615 IALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLL--SGKAIEKG--LLSPNPAVYT 670
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV 222
SL+ L++ + A F +++ ++V PD + +I Y + G + M
Sbjct: 671 SLVDGLLKHGHARAALYIFEEMLNKDV-EPDTVAFNVIIDQYSRKGKTSKVNDILSTMKS 729
Query: 223 KP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
K NL YN +++G+ K+ + +M+ G P++ +++++I G C + D
Sbjct: 730 KNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDV 789
Query: 280 A-------------------KMLMAKM--------------RLNGFK--DNVSTHKSMLK 304
A ML+ K ++N F NV T+ ++
Sbjct: 790 AIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFN 849
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GL F +A L+ ++E+ P K Y +ING C++G A+ L EM+ G+
Sbjct: 850 GLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISS 909
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ +A+ R L + +++ AI +L M +M +P ++ T++ C + +E L
Sbjct: 910 HNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALE-L 968
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M LD Y+ L+ G C G++E ++ EM
Sbjct: 969 RSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEM 1007
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 153/312 (49%), Gaps = 10/312 (3%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y +L+ L + I A + +++ ++ P+ + YT+++ G K G A +F+
Sbjct: 631 FTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFE 690
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M V+P+ +A+N +I+ + +KG+ + ++ M ++ N TYN +++G
Sbjct: 691 EMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRH 750
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ ML M +GF + + S++ G C FD A+ LR + D ++
Sbjct: 751 AMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFN 810
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++I FC+ + +A L+K+M + P V ++NA+F L+ + +A +L+ + +
Sbjct: 811 MLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLES 870
Query: 396 DCLPNFVSYNTIICGLCMA---KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+P Y T+I G+C KG M+ ++D + + S HN+ S +++G
Sbjct: 871 GSVPTNKQYITLINGMCRVGNIKGAMK-LQDEMKTLGISSHNVAM---SAIVRGLANSKK 926
Query: 453 VENVMQIAHEMV 464
+EN + + M+
Sbjct: 927 IENAIWVLDLML 938
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 127/270 (47%), Gaps = 7/270 (2%)
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNE 251
+ + +IR + M+ +A + F +M + P++ N ++ K+ +++
Sbjct: 106 AVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKG 165
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ +G P+ T+N ++ LC G+ A L+ KM +G T+ ++L C G+
Sbjct: 166 MLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGR 225
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
+ A + + + DV +Y V I+ C+ +S + LLK MR + P ++N
Sbjct: 226 YKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNT 285
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ V G+++ A + +M + LPN ++YNT+I G C G + + L+D M+
Sbjct: 286 LISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHC-TTGNIGEALRLMDVMVSH 344
Query: 432 GHNLDFTMYSCLLKGY---CEEGNVENVMQ 458
G + Y LL G E G V ++++
Sbjct: 345 GLRPNEVTYGALLNGLYKNAEFGMVSSILE 374
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 127/275 (46%), Gaps = 7/275 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+S++SL+ + S +A + I E V D T+ +I +C+ ++ A ++
Sbjct: 772 FSWHSLILGYCQSKSFDVAIKILRWITLEGHVI-DRFTFNMLITKFCERNEMKKAFELVK 830
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M V PN+ YN + NG + + +A + + ++ G P Y +I G+C G
Sbjct: 831 QMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVG 890
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ A L +M+ G + ++++GL K + A+ L ++E + P V ++
Sbjct: 891 NIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFT 950
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++ +CK +A+ L M +K V ++N + L NG+++ A L ++M Q
Sbjct: 951 TLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQR 1010
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQD---VEDLVDR 427
D PN Y +I C +++ + D+ DR
Sbjct: 1011 DLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDR 1045
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 4/242 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI + +R +K A Q Q + +YN+L L+R + A
Sbjct: 807 FTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQV 866
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+++ VP + Y T+I G C++G I+ A K+ D M + + +A + ++ G
Sbjct: 867 LLESGSVPTN-KQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSK 925
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++E A ++ M+ P T+ +++ C V +A L + M K +V +
Sbjct: 926 KIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYN 985
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ GLC G + A + + ++ P+ Y V+I+ FC E+ LL++++ R
Sbjct: 986 VLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDR 1045
Query: 361 GL 362
L
Sbjct: 1046 EL 1047
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 9/211 (4%)
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
C N ++ +I N V +A M G +V T +L L K D
Sbjct: 101 CNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFW 160
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+ + ++ + PDV ++ +++N C+ GK A LL++M G+ PT ++N +
Sbjct: 161 SFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWY 220
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM----AKGRMQDVEDLVDRMIRSG 432
+ G A L+ M + +YN I LC AKG + L+ RM R+
Sbjct: 221 CKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYL-----LLKRMRRNM 275
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ Y+ L+ G+ EG +E ++ EM
Sbjct: 276 VYPNEITYNTLISGFVREGKIEVATKVFDEM 306
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 142/257 (55%), Gaps = 4/257 (1%)
Query: 205 CKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
CK + A K+ D M K P+++ YN ++NG C++G +++A + + + + GC PN
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
++YN ++ GLC R ++A+ LM +M G NV T ++ LC G + A+ L
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ + P+ SY +++ FCK K D+A++ L M +RG P + S+N + L +GE
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+D A+ LL Q+ C P +SYNT+I GL A G+ ++ +L++ M+ G D YS
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA-GKTKEALELLNEMVSKGLQPDIITYS 241
Query: 442 CLLKGYCEEGNVENVMQ 458
+ G C E +E+ ++
Sbjct: 242 TIAAGLCREDRIEDAIR 258
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 159/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YN ++ + + + A EF + P VS Y +++G C E+A+++
Sbjct: 27 IVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS-YNIVLKGLCTAERWEDAEELM 85
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K PN++ +N +I+ C+KG +E A + + ++ GC PN L+YN +++ C
Sbjct: 86 GEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQ 145
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
++D+A + M G ++ ++ ++L LC G+ D AV L + + P + SY
Sbjct: 146 KKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISY 205
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
VI+G K GK+ EA+ LL EM ++GL+P + +++ + L ++ AI ++
Sbjct: 206 NTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQD 265
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
M PN V YN II GLC + DL MI +G + + Y+ L++G EG ++
Sbjct: 266 MGIRPNTVLYNAIILGLCKRR-ETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIK 324
Query: 455 NVMQIAHEMVTK 466
+ E+ ++
Sbjct: 325 EARDLLDELCSR 336
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 143/276 (51%), Gaps = 4/276 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PD+ TY ++ G C+ G +++A + + +PN ++YN ++ G C E+A++
Sbjct: 25 PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 84
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M EM +GC PN +T+N +I LC G V+ A ++ ++ G N ++ +L C
Sbjct: 85 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCK 144
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
K D+A+ +L ++ PD+ SY ++ C+ G+ D A+ LL +++ +G P + S
Sbjct: 145 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 204
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N V L + G+ A+ LL +M P+ ++Y+TI GLC + R++D ++
Sbjct: 205 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC-REDRIEDAIRAFGKV 263
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G + +Y+ ++ G C+ + + + M+
Sbjct: 264 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMI 299
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 4/244 (1%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
+G V+ A+ Q + SYN LL + + A F +V P D+
Sbjct: 110 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP-DIV 168
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
+Y T++ C+ G ++ A ++ + K P L++YNT+I+G K G+ +EA + +NEM
Sbjct: 169 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 228
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+++G +P+ +TY+ + GLC R+++A K++ G + N + +++ GLC +
Sbjct: 229 VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 288
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
A+ ++ P+ +Y ++I G G EA LL E+ +RG+
Sbjct: 289 HSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGA 348
Query: 373 FRIL 376
R+L
Sbjct: 349 IRLL 352
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ A G V A+ HQ K L SYN+++ L + K A E +++V +
Sbjct: 173 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 232
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ PD+ TY+T+ G C+ IE+A + F M ++PN + YN +I G CK+ E A
Sbjct: 233 -LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 291
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
M+ GC PNE TY +I GL G + EA+ L+ ++
Sbjct: 292 IDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 333
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 159/309 (51%), Gaps = 5/309 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS+L K A F ++ + + V PDV TY +++ CK G A+K+FD
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKM-RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDS 326
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT ++P++ Y T++ G+ KG L E ++ M+ G P+ +N +I +
Sbjct: 327 MTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEK 386
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA ++ +KMR +G NV T+ +++ LC G D A+ Y +++ + P++ Y
Sbjct: 387 VDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 446
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ C K D+A L+ EM RG+ FN++ + G + + L M ++
Sbjct: 447 LIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN ++Y+T+I G C+A G+M + L+ M G D Y+ L+ GYC +++
Sbjct: 507 VKPNVITYSTLIDGYCLA-GKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565
Query: 457 MQIAHEMVT 465
+ + EMV+
Sbjct: 566 LALFKEMVS 574
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 177/382 (46%), Gaps = 41/382 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + L+K D + A+ H G + SY +++ + A
Sbjct: 159 FSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+H+++ + PDV TY+++I CK ++ A +V M V PN + YN++++G+C
Sbjct: 219 YHEMLDRRI-SPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC 277
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+ +EA + +M + G P+ +TYN+++ LC NGR EA+ + M G + +++
Sbjct: 278 SSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIA 337
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++L+G G + L ++ ++PD + ++I + K K DEA+ + +M
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM---- 413
R GL P V ++ AV IL ++G +D A+L +QM PN + Y ++I LC+
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKW 457
Query: 414 ------------------------------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+GR+ + E L D M+R G + YS L
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517
Query: 444 LKGYCEEGNVENVMQIAHEMVT 465
+ GYC G ++ ++ M +
Sbjct: 518 IDGYCLAGKMDEATKLLSSMFS 539
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 196/408 (48%), Gaps = 54/408 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY + V A+ F + +Q + +Y +++G+L + S+ A +F Q++ E
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436
Query: 189 VVPPDVSTYTTMI---------------------RG--------------YCKMGMIENA 213
+ P ++ YT++I RG +CK G + +
Sbjct: 437 LTP-NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495
Query: 214 KKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+K+FD+M VKPN++ Y+T+I+G+C G+++EA K ++ M + G +P+ +TYN +I G
Sbjct: 496 EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLING 555
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C R+D+A L +M +G N+ T+ +L+GL + A + ++ +
Sbjct: 556 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLE 615
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ +Y ++++G CK +DEA+ + + + L+ +FN + L++ G D A L
Sbjct: 616 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFV 675
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+PN+ +Y + + + +G +++++ L M +G +D M + +++ +
Sbjct: 676 AFSSNGLVPNYWTYRLMAENI-IGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQR 734
Query: 451 GNVENVMQIAHEMVTKKGRLLKL---KNFLTRVVDALLLMWIVTGGSW 495
G +T+ G L + K+F A L + +++GG +
Sbjct: 735 GE-----------ITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 145/282 (51%), Gaps = 9/282 (3%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT------VKPNLLAYNTMINGFCKKGELEEA 245
PDV + T +++G C + A ++ +M P++++Y T+INGF K+G+ ++A
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+EM++R P+ +TY+++I LC +D+A ++ M NG N T+ S+L G
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C + +A+G+L+ + + PDV +Y +++ CK G+S EA + M RGL+P
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ ++ + + G L LL M + P+ +N +IC AK D LV
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY--AKQEKVDEAMLV 393
Query: 426 -DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+M + G N + Y ++ C+ G+V++ M +M+ +
Sbjct: 394 FSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 12/248 (4%)
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC---RPNELTY 264
E+A+ VFD + + ++ N + + + N M G P TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 90
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG-YLRNVM 323
+I C GR+D + + GF+ T +LKGLC + A+ LR +
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM---RARGLKPTVFSFNAVFRILVENG 380
E + PDV S +++ G C +S EA+ LL M R G P V S+ V + G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+ D+A +M P+ V+Y++II LC + M +++ M+++G + Y
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQA-MDKAMEVLTTMVKNGVMPNCMTY 269
Query: 441 SCLLKGYC 448
+ +L GYC
Sbjct: 270 NSILHGYC 277
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P V +Y ++I C+ G+ D + L + +G + +F + + L +
Sbjct: 81 GKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSD 140
Query: 385 AI-LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR---SGHNLDFTMY 440
A+ ++L++M ++ C+P+ S ++ GLC + R Q+ +L+ M G D Y
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLC-DENRSQEALELLHMMADDRGGGSAPDVVSY 199
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ ++ G+ +EG+ + HEM+ ++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRR 226
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 202/413 (48%), Gaps = 31/413 (7%)
Query: 85 PNKYHHTTPCYTAITDVL---------LSHSLISIAASLLKNSNKLSDFFISKLIKAYGD 135
P + H +PC + L L++S++++ L + + + A
Sbjct: 82 PARAHAVSPCTIDLALDLSARLRHPRQLTNSILALFPRLRLPFTPRTFPILFERFAASQR 141
Query: 136 RGNVKAAIFW-FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
R ++ +F H++ ++ L+ NSLL L + A + E PPDV
Sbjct: 142 RPDIAVRLFLSLHRSHRVVQDLPLF--NSLLDALGKSRHASKAASLVRAL--ERRFPPDV 197
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
TY T+ G+C+ A + M V P YN ++ GF + G+++ A +
Sbjct: 198 VTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQ 257
Query: 252 MMNRG-----CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
M RG C+P+ ++Y +I+GL + G++D+A+ L +M G +V+T+ ++++ +
Sbjct: 258 MKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVI 317
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G + AV +++ + P+V +Y V+I G C +GK D A+ L++ M+ G +P V
Sbjct: 318 CKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVV 377
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQ-MDCLPNFVSYNTIICGLCMAKGRMQDVED-- 423
++N + R E GE+++A+ L ++M + DCLPN +YN II + + K R +D+
Sbjct: 378 QTYNVLIRYSFEEGEIEKALCLFERMSKGEDCLPNQDTYNIIISAMFVRK-RAEDMATAA 436
Query: 424 -LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKN 475
+V M+ G+ M + +L G GN QI+ +++ + + +L+
Sbjct: 437 RMVMEMVERGYLPRRFMLNRVLNGLMLTGN----QQISRDLLRMQEKYRRLRR 485
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 188/378 (49%), Gaps = 42/378 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI+ + D G + F + + + C +YN+L+ ++ +K A E F ++
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI- 309
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E V P+V TYT +I G C +G + A ++ ++M K PN + YN +IN CK G +
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA-KMLMAKMRLNGFKD-NVSTHKS 301
+A + + M R RP+ +TYN ++ GLC G +DEA K+L ++ + + D +V ++ +
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 302 MLKGLC-----------------------------------VVGKFDQAVGYLRNVMEAN 326
++ GLC G ++A+ + + ++
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ + +Y +I+GFCK G + A LL +MR L+P+VF +N + L + G LD+A
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L ++M + + P+ VS+N +I G + G ++ E L+ M R+G + D YS L+
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDG-SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 447 YCEEGNVENVMQIAHEMV 464
+ + G ++ + +MV
Sbjct: 609 FLKLGYLDEAISFFDKMV 626
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 180/364 (49%), Gaps = 41/364 (11%)
Query: 139 VKAAIFWFHQAKQIENGACL-YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS-- 195
+K A+ F QA +++G+ L ++ N+L+ LVR + +LA F+ ++++ + VS
Sbjct: 54 LKNAVSVFQQA--VDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 196 --------------------------------TYTTMIRGYCKMGMIENAKKVFDVM--- 220
+ +++G C+ A + M
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
++ P++ +YNT+I GFC+ ELE+A + NEM GC + +T+ +I C G++DEA
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+ +M+ G + ++ + S+++G C G+ D+ V+E +P +Y +I G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
FCK+G+ EA + + M RG++P V+++ + L G+ A+ LL M + D PN
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+YN II LC G + D ++V+ M + D Y+ LL G C +G+++ ++
Sbjct: 352 AVTYNIIINKLC-KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 461 HEMV 464
+ M+
Sbjct: 411 YLML 414
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 166/316 (52%), Gaps = 7/316 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N LL L R A ++ + N + PDV +Y T+IRG+C+ +E A ++
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREM-RRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +L+ + +I+ FCK G+++EA + EM G + + Y ++I G C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D K L ++ G T+ ++++G C +G+ +A ++E + P+V +Y
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G C +GK+ EA+ LL M + +P ++N + L ++G + A+ +++ M +
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR--SGHNLDFTMYSCLLKGYCEEGN 452
P+ ++YN ++ GLC AKG + + L+ M++ S + D Y+ L+ G C+E
Sbjct: 381 RRTRPDNITYNILLGGLC-AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Query: 453 VENVMQIAHEMVTKKG 468
+ + I +V K G
Sbjct: 440 LHQALDIYDLLVEKLG 455
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 175/343 (51%), Gaps = 13/343 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A+ G + A+ + + K + A L Y SL+ + + F ++++
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P + TY T+IRG+CK+G ++ A ++F+ M V+PN+ Y +I+G C G+ +EA
Sbjct: 278 DSPCAI-TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +N M+ + PN +TYN +I LC +G V +A ++ M+ + + T+ +L G
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 306 LCVVGKFDQAVGYLRNVMEAN--MNPDVKSYEVVINGFCKIGKSDEAI---SLLKEMRAR 360
LC G D+A L +++ + +PDV SY +I+G CK + +A+ LL E
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G + T N + ++ G++++A+ L KQ+ + N +Y +I G C G +
Sbjct: 457 GDRVTT---NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT-GMLNV 512
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ L+ +M S Y+CLL C+EG+++ ++ EM
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 138/311 (44%), Gaps = 45/311 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKEN-VVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+YN LLG L + A + + ++K++ PDV +Y +I G CK + A ++D
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 219 VMT--------VKPNLL------------------------------AYNTMINGFCKKG 240
++ V N+L Y MI+GFCK G
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTH 299
L AK + +M +P+ YN ++ LC G +D+A L +M R N F D VS +
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
M+ G G A L + A ++PD+ +Y +IN F K+G DEAIS +M
Sbjct: 569 -IMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G +P ++V + + GE D+ L+K++ D + + T++ +C + M
Sbjct: 628 SGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANM- 686
Query: 420 DVEDLVDRMIR 430
DL R++R
Sbjct: 687 ---DLAKRLLR 694
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 42/317 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L + + A E +++K+ PD TY ++ G C G ++ A K+ +
Sbjct: 354 TYNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 220 MT-----VKPNLLAYNTMINGFCKKGELEEA---------------KKCMNEMMNRGCRP 259
M P++++YN +I+G CK+ L +A + N ++N +
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 260 NEL--------------------TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
++ TY AMI G C G ++ AK L+ KMR++ + +V +
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+L LC G DQA + N PDV S+ ++I+G K G A SLL M
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
GL P +F+++ + ++ G LD AI +M P+ ++++ C+++G
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL-KYCISQGETD 651
Query: 420 DVEDLVDRMIRSGHNLD 436
+ +LV +++ LD
Sbjct: 652 KLTELVKKLVDKDIVLD 668
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 36/219 (16%)
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING-- 340
++A M GF NV H +LKGLC + +AV LR + ++ PDV SY VI G
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188
Query: 341 ---------------------------------FCKIGKSDEAISLLKEMRARGLKPTVF 367
FCK GK DEA+ LKEM+ GL+ +
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+ ++ R + GELDR L ++ + P ++YNT+I G C G++++ ++ +
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL-GQLKEASEIFEF 307
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI G + Y+ L+ G C G + +Q+ + M+ K
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 178/345 (51%), Gaps = 9/345 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+KL+ +G V+ + + K ++ G C L+++N + L R + A +
Sbjct: 220 NKLLHTLCKKGEVQESERLLN--KVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSV 277
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
++E + P DV TY T+I G CK + A+K + ++P+ YNT+I+G+CK G
Sbjct: 278 IREGLTP-DVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGM 336
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L+ A+K + + +G P+E TY ++I GLC N +D A L G K V +
Sbjct: 337 LQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNM 396
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++KGLC G QA+ + + E + D+ +Y +VING CK+G +A +L+ + A+G
Sbjct: 397 LIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKG 456
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P VF+FN + + +++ I +L +M P+ ++YN+++ GL A + +D+
Sbjct: 457 YVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAV-KNEDL 515
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + M+ G + Y+ L + C+ G V + + E++ K
Sbjct: 516 METFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNK 560
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 216/484 (44%), Gaps = 84/484 (17%)
Query: 58 VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN 117
V V+ +Q +P AL FN + + H+ Y I L H ++L
Sbjct: 10 VAAVLKQQKDPLKALEMFNKVKREDG----FKHSLLTYKCIIQKLGFHGNFVAMENVLAE 65
Query: 118 S-----NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+ N L + +K+YG +G V+ A+ F + + SYN+++ +LV
Sbjct: 66 TRMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESG 125
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAY 229
K A + F ++ +VP DV T+T I+ +C+ +A ++ + M + N +AY
Sbjct: 126 YFKQAHKVFLRMKNVGIVP-DVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAY 184
Query: 230 NTMINGF-----------------------------------CKKGELEEAKKCMNEMMN 254
T++ GF CKKGE++E+++ +N+++
Sbjct: 185 CTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLK 244
Query: 255 RG---------------CR--------------------PNELTYNAMIYGLCINGRVDE 279
+G CR P+ +TYN +I GLC N V E
Sbjct: 245 KGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVE 304
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A+ + K+ G + + T+ +++ G C +G A L+ + PD +Y +IN
Sbjct: 305 AEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLIN 364
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G C+ + D A++L +GLKPTV +N + + L + G + +A+ ++ +M + C
Sbjct: 365 GLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSS 424
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ +YN +I GLC G + D +L++ I G+ D ++ L+ GYC++ +E +QI
Sbjct: 425 DIWTYNLVINGLC-KMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQI 483
Query: 460 AHEM 463
++M
Sbjct: 484 LNKM 487
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 192/422 (45%), Gaps = 79/422 (18%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ L + +++ AE++ H++V + PD TY T+I GYCKMGM++NA+K+
Sbjct: 288 TYNTLICGLCKNSNVVEAEKYLHKLVNGGL-EPDGFTYNTLIDGYCKMGMLQNAEKILQG 346
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
K P+ Y ++ING C+ E++ A N + +G +P + YN +I GLC G
Sbjct: 347 AICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGL 406
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ +A +M +M NG ++ T+ ++ GLC +G A + + + PDV ++
Sbjct: 407 ILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNT 466
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV------------------------ 372
+I+G+CK K + I +L +M + G+ P V ++N+V
Sbjct: 467 LIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKG 526
Query: 373 -------FRILVEN----GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ IL E+ G+++ A+ L+ ++ P+ VS+ TII G G ++
Sbjct: 527 CVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFA-NNGDLKGA 585
Query: 422 EDLVDRM-------------------------IRSGHNL-----------DFTMYSCLLK 445
L RM + G L D Y ++
Sbjct: 586 YQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMID 645
Query: 446 GYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQV 505
G+C GN ++ + EM+ +KG + L F RV++ L + V I F+ VH
Sbjct: 646 GFCITGNTDSGYKFLLEMI-EKGFIPSLTTF-GRVINCLCVQHRVHEAVDIIHFM-VHNG 702
Query: 506 VV 507
+V
Sbjct: 703 IV 704
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 146/308 (47%), Gaps = 6/308 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIK G + A+ ++ + + +++YN ++ L ++ + A + + +
Sbjct: 397 LIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKG 456
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
VP DV T+ T+I GYCK +E ++ + M V P+++ YN+++NG K + E+
Sbjct: 457 YVP-DVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDL 515
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M+ +GC PN++TYN + LC G+V+EA L+ ++ G + + +++ G
Sbjct: 516 METFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISG 575
Query: 306 LCVVGKFDQAVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G A R + E ++ +Y ++IN F + L EM A G P
Sbjct: 576 FANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAP 635
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+++ + G D L +M + +P+ ++ +I LC+ + R+ + D+
Sbjct: 636 DTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCV-QHRVHEAVDI 694
Query: 425 VDRMIRSG 432
+ M+ +G
Sbjct: 695 IHFMVHNG 702
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L L + + A + +I+ + + P VS + T+I G+ G ++ A ++F
Sbjct: 533 TYNILTESLCKAGKVNEALDLVDEILNKGITPDTVS-FATIISGFANNGDLKGAYQLFRR 591
Query: 220 M----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M V YN MIN F +K +L +K EM GC P+ TY MI G CI G
Sbjct: 592 MGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITG 651
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
D + +M GF +++T ++ LCV + +AV + ++ + P+V
Sbjct: 652 NTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEV 707
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 153/292 (52%), Gaps = 6/292 (2%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
+F Q ++ + D+ ++T +I +C+ + A V M +P+++ + ++++GF
Sbjct: 92 YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGF 151
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C + +A + M+ G PN + YN +I GLC NG ++ A L+ +M G +V
Sbjct: 152 CLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV 211
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ ++L GLC G++ A LR++M+ ++NPDV ++ +I+ F K G DEA L KE
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M + P ++N++ L +G L A M C PN V+YNT+I G C K
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC--KF 329
Query: 417 RMQDVE-DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
RM D L RM G N D Y+ L+ GYC+ G + + I MV+++
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 158/294 (53%), Gaps = 5/294 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-DV 219
YN+L+ L + + +A E +++ K+ + DV TY T++ G C G +A ++ D+
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGL-GADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 220 M--TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
M ++ P+++ + +I+ F K+G L+EA++ EM+ PN +TYN++I GLC++GR+
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+AK M G NV T+ +++ G C D+ + + + N D+ +Y +
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G+C++GK A+ + M +R + P + + + L NGE++ A++ M + +
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
V+YN +I GLC A +++ +L R+ G D Y+ ++ G C+ G
Sbjct: 418 YIGIVAYNIMIHGLCKAD-KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 167/323 (51%), Gaps = 8/323 (2%)
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+F+ + K I A +YN+L+ L A +VK + P+V +T +I
Sbjct: 731 VFYCMEKKGIRADAV--TYNTLISGLSNSGRWTDAARLLRDMVKRKI-DPNVIFFTALID 787
Query: 203 GYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
+ K G + A+ ++ M +V PN+ YN++INGFC G L +AK + M+++GC P
Sbjct: 788 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 847
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TYN +I G C + RV++ L +M G + T+ +++ G C GK + A
Sbjct: 848 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 907
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+++ ++PD+ +Y ++++ C GK ++A+ ++++++ + + ++N + + L
Sbjct: 908 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 967
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
+L A L + + + P+ ++Y T+I GLC KG ++ + L RM G +
Sbjct: 968 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC-RKGLQREADKLCRRMKEDGFMPSERI 1026
Query: 440 YSCLLKGYCEEGNVENVMQIAHE 462
Y L+ + + E +++ AHE
Sbjct: 1027 YDETLRDHYTSLSAE-LIKAAHE 1048
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 159/309 (51%), Gaps = 7/309 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+ +L V+ ++N + +H++ EN+ + D+ ++T +I +C+ + A +
Sbjct: 606 DFTRVLTVIAKMNKFDIVIYLYHKM--ENLGISHDLYSFTILIHCFCRCSRLSLALALLG 663
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M +P+++ +++NGFC+ +EA ++ M G PN + YN +I GLC N
Sbjct: 664 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 723
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++ A + M G + + T+ +++ GL G++ A LR++++ ++P+V +
Sbjct: 724 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 783
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+ F K G EA +L KEM R + P VF++N++ +G L A + M
Sbjct: 784 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 843
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C P+ V+YNT+I G C +K R++D L M G D Y+ L+ GYC+ G +
Sbjct: 844 GCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 902
Query: 456 VMQIAHEMV 464
++ + MV
Sbjct: 903 AQKVFNRMV 911
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 129/238 (54%), Gaps = 4/238 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +L+ V V+ ++ A+E + ++++ +V P +V TY ++I G C G + +AKK FD+
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV-TYNSIINGLCMHGRLYDAKKTFDL 306
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ YNT+I+GFCK ++E K M G + TYN +I+G C G+
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ A + M ++ TH +L GLCV G+ + A+ ++ E+ + +Y +
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G CK K ++A L + G+KP ++ + L +NG A L+++M +
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 156/324 (48%), Gaps = 5/324 (1%)
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
I+ +H+ + + LYS+ L+ R + + LA +++K P + T +++
Sbjct: 624 IYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG-FRPSIVTLGSLLN 682
Query: 203 GYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
G+C+ + A + D M PN++ YNT+ING CK +L A + M +G R
Sbjct: 683 GFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRA 742
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TYN +I GL +GR +A L+ M NV +++ G +A
Sbjct: 743 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 802
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ ++ ++ P+V +Y +INGFC G +A + M ++G P V ++N + ++
Sbjct: 803 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 862
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
++ + L +M + + +YNT+I G C A G++ + + +RM+ G + D
Sbjct: 863 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA-GKLNVAQKVFNRMVDCGVSPDIVT 921
Query: 440 YSCLLKGYCEEGNVENVMQIAHEM 463
Y+ LL C G +E + + ++
Sbjct: 922 YNILLDCLCNNGKIEKALVMVEDL 945
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 122/239 (51%), Gaps = 4/239 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI + +GN+ A + + Q +YNS++ L + A++ F +
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ P +V TY T+I G+CK M++ K+F M+ + ++ YNT+I+G+C+ G+L
Sbjct: 310 KGCFP-NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A M++R P+ +T+ +++GLC+NG ++ A + MR + + + M+
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI 428
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
GLC K ++A + + PD ++Y ++I G CK G EA L++ M+ G+
Sbjct: 429 HGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 124/280 (44%), Gaps = 49/280 (17%)
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
++T NL Y T+I F +K EL G + ++ +I+ C R+
Sbjct: 77 LLTATANLRRYETVIY-FSQKMEL------------YGISHDLYSFTILIHCFCRCSRLS 123
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV---------GYLRNVMEAN--- 326
A ++ KM G++ ++ T S+L G C+V + A GY NV+ N
Sbjct: 124 FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI 183
Query: 327 -----------------------MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+ DV +Y ++ G C G+ +A +L++M R +
Sbjct: 184 DGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V +F A+ + V+ G LD A L K+M Q PN V+YN+II GLCM GR+ D +
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM-HGRLYDAKK 302
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D M G + Y+ L+ G+C+ V+ M++ M
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 111/230 (48%), Gaps = 1/230 (0%)
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
GF E+A EM++ P+ + + ++ R + KM L G
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
++ + ++ C + A+ L +M+ P + ++ +++GFC + + +A SL+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
M G +P V +N + L +NGEL+ A+ LL +M + + V+YNT++ GLC +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
GR D ++ M++ N D ++ L+ + ++GN++ ++ EM+
Sbjct: 225 -GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 36/275 (13%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ + ++ K + + ++M N G + ++ +I+ C R+ A L
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ KM GF+ ++ T S+L G C +F +AV + ++ P+V Y VING CK
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721
Query: 344 -----------------------------------IGKSDEAISLLKEMRARGLKPTVFS 368
G+ +A LL++M R + P V
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
F A+ V+ G L A L K+M + +PN +YN++I G C+ G + D + + D M
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI-HGCLGDAKYMFDLM 840
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G D Y+ L+ G+C+ VE+ M++ EM
Sbjct: 841 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 875
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 104/226 (46%), Gaps = 1/226 (0%)
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ ++A EM+ P+ + + ++ + + D L KM G ++ +
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ C + A+ L +M+ P + + ++NGFC+ + EA+SL+ M
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G P V +N V L +N +L+ A+ + M + + V+YNT+I GL + GR D
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS-GRWTD 762
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+ M++ + + ++ L+ + +EGN+ + EM+ +
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 808
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 160/319 (50%), Gaps = 8/319 (2%)
Query: 152 IENG---ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
+ENG A + +Y L+ L I E ++ +NV DV YT +I YC+ G
Sbjct: 193 MENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAG-DVYLYTAVINAYCRAG 251
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+ A +VFD ++PN Y +INGFCK G++E A+ + +M RG N++ +N
Sbjct: 252 NVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFN 311
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
MI G C G VD A + A M G + +V T+ ++ GLC V + +A L ++E
Sbjct: 312 TMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEK 371
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ P+ +Y +I+ CK G EA L +EM +G P+V ++N + ++ G + A
Sbjct: 372 GVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREA 431
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
K+M + +P+ +Y +++ G C+ G++ L + M G + Y+ L+
Sbjct: 432 ERFRKEMEKKGLVPDVYTYASLVHGHCV-NGKVDVALKLFEEMKHRGTEPNVVAYTALIS 490
Query: 446 GYCEEGNVENVMQIAHEMV 464
G +EG E Q+ +M+
Sbjct: 491 GLAKEGRSEEAFQLYDDML 509
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 161/314 (51%), Gaps = 8/314 (2%)
Query: 134 GDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
GD V+A + +AK + +Y Y +++ R +++ A E F + V N + P+
Sbjct: 216 GDISKVEAVVDEM-KAKNVAGD--VYLYTAVINAYCRAGNVRRASEVFDECVG-NGIEPN 271
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMN 250
TY +I G+CK+G +E A+ + M V N + +NTMI+G+C++G ++ A K
Sbjct: 272 ERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKA 331
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M G + TYN + GLC R+ EAK L+ M G N T+ +++ C G
Sbjct: 332 AMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEG 391
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+A R + P V +Y V+++G+ K G EA KEM +GL P V+++
Sbjct: 392 DMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYA 451
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
++ NG++D A+ L ++M PN V+Y +I GL +GR ++ L D M++
Sbjct: 452 SLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLA-KEGRSEEAFQLYDDMLK 510
Query: 431 SGHNLDFTMYSCLL 444
+G D ++YS L+
Sbjct: 511 AGLTPDDSLYSALV 524
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 160/330 (48%), Gaps = 12/330 (3%)
Query: 91 TTPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWF 146
T YT + D L + IS ++ +K N D ++ + +I AY GNV+ A F
Sbjct: 201 TVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVF 260
Query: 147 HQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
+ + NG +Y L+ ++ ++ AE + V + + TMI GY
Sbjct: 261 DEC--VGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQI-IFNTMIDGY 317
Query: 205 CKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
C+ GM++NA KV + M ++ ++ YNT+ G C+ + EAK ++ M+ +G PN
Sbjct: 318 CRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNY 377
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+TY +I C G + EA+ L +M G +V T+ M+ G G +A + +
Sbjct: 378 VTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKE 437
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ + + PDV +Y +++G C GK D A+ L +EM+ RG +P V ++ A+ L + G
Sbjct: 438 MEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGR 497
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+ A L M + P+ Y+ ++ L
Sbjct: 498 SEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+YN+L L RVN + A+ H I+ E VPP+ TYTT+I +CK G + A+++F
Sbjct: 342 VYTYNTLACGLCRVNRMAEAKTLLH-IMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLF 400
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P+++ YN M++G+ KKG + EA++ EM +G P+ TY ++++G C+N
Sbjct: 401 REMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVN 460
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+VD A L +M+ G + NV + +++ GL G+ ++A ++++A + PD Y
Sbjct: 461 GKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLY 520
Query: 335 EVVINGFCKIGKSD 348
++ + D
Sbjct: 521 SALVGSLHTDNRKD 534
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 137/272 (50%), Gaps = 4/272 (1%)
Query: 198 TTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+ ++ G+CK G +++A+ + D M V+ N L YN++++ + ++ + ++ + M N
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
G TY ++ L G + + + ++ +M+ +V + +++ C G +
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A + + P+ ++Y V+INGFCKIG+ + A LL +M+ RG+ FN +
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMID 315
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
G +D A+ + M +M + +YNT+ CGLC RM + + L+ MI G
Sbjct: 316 GYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVN-RMAEAKTLLHIMIEKGVP 374
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ Y+ L+ +C+EG++ ++ EM K
Sbjct: 375 PNYVTYTTLISIHCKEGDMVEARRLFREMAGK 406
>gi|255660900|gb|ACU25619.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 481
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 208/428 (48%), Gaps = 25/428 (5%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNT ING+ + ++EEA+K EM R P +TY +I G +VD A L+ +M+
Sbjct: 188 YNTXINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDXALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +M+ + P D + +I+ C G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCXSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL--PNFV--- 402
D A +LK M + + + + G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHL 367
Query: 403 ---SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+YN I LC G+ E LV ++++ G D T + L++G+ +EG+ ++ ++
Sbjct: 368 EPSAYNPXIEYLC-NNGQAXKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAFEL 425
Query: 460 AHEMVTKK 467
M+ +K
Sbjct: 426 LKIMLRRK 433
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 148/317 (46%), Gaps = 7/317 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+G ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTXINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDXAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEM 463
+C GN++ + M
Sbjct: 301 HCXSGNLDAAADVLKAM 317
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN + L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPXIEYLCNNGQAXKAETLVRQLMKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
M V AYN+++ + KK E +AK ++ M+ P+ + +++
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSSLFRSVM 480
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 217/495 (43%), Gaps = 46/495 (9%)
Query: 6 RSLTNISQIPDQSILVTSITSVIQRLNPQNPSPK---------NISSQPLDQFSLCLGSN 56
RSL N S S+ ++RL P + SP + S +PL L L
Sbjct: 176 RSLAN-----SPSPSAASVLGFLRRL-PTDASPHLFPHLIAALSRSPRPLLALRLFLRPP 229
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLI--SIAASL 114
+ + N AL F P+ P + H+ +T + LLS +L+ + +SL
Sbjct: 230 TSAAITHHSFN--SALLRFPLP--PHLLPAFFSHSLRRFTRLAPTLLSFNLLLKCVCSSL 285
Query: 115 LKNSNKL--------------------SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
+ +++L F S ++ A D G V A+ H+ ++
Sbjct: 286 VPRNHQLYLELALRVVHRSIPAWKLVPDKFTYSTVVSALADAGRVDDAVALVHE-MVVDG 344
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
++N +LG ++R + A + F ++ P +TY ++ G G + A
Sbjct: 345 VVAAEAFNPVLGAMLRTGDVTGAAKLF-SFMQLKGCAPSAATYNVLLHGLLLCGRAKAAM 403
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
V M V P ++ Y +++G + G LE+A K + EM ++G PNE ++ +I G
Sbjct: 404 GVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGF 463
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G VD A + M G K NV + +M+ GL GK +A R ++EA P++
Sbjct: 464 CKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNI 523
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y ++ G+ +IG S +A+S ++M G P +++ + L G A+++ K
Sbjct: 524 MTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKH 583
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M C+P+ ++Y ++I G C++ + D + R + D Y+ LL G
Sbjct: 584 MLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAK 643
Query: 452 NVENVMQIAHEMVTK 466
++ M + ++M+ +
Sbjct: 644 DLPRAMDLLNQMLDQ 658
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 155/302 (51%), Gaps = 5/302 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G KAA+ + ++ E + +Y +++ LVR ++ A + ++ + +VP +
Sbjct: 397 GRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEF-V 455
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
++ +I G+CK+G ++ A +V+D M +KPN++ Y+ MI+G + G++ EA+ EM+
Sbjct: 456 FSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMI 515
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
C PN +TY++M+ G G +A M G N T+ ++ GLC VG+
Sbjct: 516 EAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSK 575
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG-LKPTVFSFNAV 372
A+ ++++ PD +Y +I GFC G D + L +M ARG P V +N +
Sbjct: 576 DAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVL 635
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L+ +L RA+ LL QM C P+ V+ NT + + + + + +E LV R+
Sbjct: 636 LDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFLREIEVGQKGQEFLEGLVVRLCNRK 695
Query: 433 HN 434
N
Sbjct: 696 RN 697
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 112/254 (44%), Gaps = 10/254 (3%)
Query: 222 VKPNLLAYNTMINGFCK-------KGELEEAKKCMNEMMNR-GCRPNELTYNAMIYGLCI 273
+ P LL++N ++ C + LE A + ++ + P++ TY+ ++ L
Sbjct: 267 LAPTLLSFNLLLKCVCSSLVPRNHQLYLELALRVVHRSIPAWKLVPDKFTYSTVVSALAD 326
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
GRVD+A L+ +M ++G +L + G A + P +
Sbjct: 327 AGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAAT 385
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y V+++G G++ A+ +++ M + P V ++ AV LV G L+ A ++++M
Sbjct: 386 YNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMR 445
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+PN ++ +I G C G + + D M+ +G + +YS ++ G G +
Sbjct: 446 SKGLVPNEFVFSPVITGFCKL-GEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKM 504
Query: 454 ENVMQIAHEMVTKK 467
+ EM+ K
Sbjct: 505 TEAELLFREMIEAK 518
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +++ Y G+ A+ ++ +I +Y+ L+ L V K A + ++
Sbjct: 527 SSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLG 586
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMINGFCKKGEL 242
VP D YT+MI+G+C GM++ ++F M + P+++ YN +++G + +L
Sbjct: 587 RGCVP-DTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDL 645
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
A +N+M+++ C P+ +T N + + + + E
Sbjct: 646 PRAMDLLNQMLDQACDPDTVTCNTFLREIEVGQKGQE----------------------F 683
Query: 303 LKGLCVV---GKFDQAVGYLRNVMEAN-MNPDVKSYEVVINGFCK 343
L+GL V K ++A G + VM A + P+ E+V+ G C+
Sbjct: 684 LEGLVVRLCNRKRNKAAGEVLMVMLAKYIVPEAAVLEMVVRGVCR 728
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 173/335 (51%), Gaps = 8/335 (2%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
++ LI Y G +K A + ++ I G +++YN L+ L + S+ A + ++
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNET-MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKG 240
+ + P+V TY ++ G CK G++E A V M+ + N + YN +I C+K
Sbjct: 416 MSRRGC-EPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKE 474
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++ A ++EM +GC+P+ TYN++IYGLC R+DEA L M L+G N T+
Sbjct: 475 KVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYN 534
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ L G F +A+ + +++ D +Y +I FCK+G ++ + L ++M
Sbjct: 535 TLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMD 594
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GL S N + L + G++D A L+ +P+ V+YN+++ GLC GR+++
Sbjct: 595 GLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV-GRIKE 653
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+L DR+ G D Y+ + C+EG V +
Sbjct: 654 ALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVND 688
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 174/343 (50%), Gaps = 11/343 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLY-SYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
++K YG G AI + + + SY+ +L +LV N ++A F+ ++ +
Sbjct: 153 IMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSK 212
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEE 244
V P V T+ +++ C +++A + MT PN + Y T+I+ +K ++ E
Sbjct: 213 G-VSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSE 271
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A K + EM GC P+ T+N +I+GLC ++ +A L+ +M L GF + T+ +L
Sbjct: 272 ALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLH 331
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE-MRARGLK 363
GLC +GK ++A R ++ P+ +ING+ G+ EA S L E M G +
Sbjct: 332 GLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQ 387
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +F++N + L + G L A L+ +M + C PN ++Y ++ GLC A G +++
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKA-GLLEEAGL 446
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ M G ++ +Y+CL+ C + V + + EM TK
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTK 489
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 149/312 (47%), Gaps = 12/312 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP-PDVSTYTTMIRGYCKMGMIENAKKVFD 218
+Y LL L R+ + A + +I P P+ + T+I GY G ++ A+ +
Sbjct: 325 TYGFLLHGLCRIGKLNEARKILIKI------PCPNNAILNTLINGYVMSGQLKEAQSFLN 378
Query: 219 VMTV----KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ +P++ YN +++G CK+G L A+ +NEM RGC PN +TY ++ GLC
Sbjct: 379 ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKA 438
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G ++EA +++ +M G N + ++ LC K A+ L + PD+ +Y
Sbjct: 439 GLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTY 498
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G CK+ + DEA L M G ++N + L+ G +A+ L+ M
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C + ++YN +I C G ++ +L ++MI G D + ++ G C+ G V+
Sbjct: 559 RGCTLDKITYNGLIKAFCKV-GNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617
Query: 455 NVMQIAHEMVTK 466
N + + + +
Sbjct: 618 NAFEFLRDAINR 629
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 135/251 (53%), Gaps = 4/251 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN L+ L R + +A ++ + PD+ TY ++I G CK+ I+ A ++F M
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGC-KPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ N + YNT+I+ ++G ++A +N+M+ RGC +++TYN +I C G +
Sbjct: 522 LLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNI 581
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
++ L +M ++G + + M+ GLC VGK D A +LR+ + PD+ +Y V
Sbjct: 582 EKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSV 641
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+NG CK+G+ EA++L ++ G++P F++N + G ++ A + +
Sbjct: 642 LNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGF 701
Query: 398 LPNFVSYNTII 408
+P+ +++N ++
Sbjct: 702 VPSNLTWNVLV 712
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 4/238 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L++YNSL+ L +V+ I A FH ++ + V +V TY T+I + G + A +
Sbjct: 495 LFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV-TYNTLIHALLRRGAFQKALTLV 553
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + + + YN +I FCK G +E+ + +M+ G + ++ N MI GLC
Sbjct: 554 NDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKV 613
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+VD A + GF ++ T+ S+L GLC VG+ +A+ + + PD +Y
Sbjct: 614 GKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTY 673
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
I+ CK G ++A S G P+ ++N + L++ + +L ++
Sbjct: 674 NTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 147/313 (46%), Gaps = 12/313 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF--- 217
Y + L + KL ++ Q+ +E +V + S + +++ Y K G A ++
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRE-SIFMIIMKHYGKAGQPGQAIRLLLDM 173
Query: 218 -DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
V +P +Y+ ++ + A +M+++G P T+ ++ LC+
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNE 233
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD A L+ M +G N +++++ L + +A+ L + PDV+++
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G CK+ K +A L+ M RG P ++ + L G+L+ A +L ++P
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP--- 350
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDR-MIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
PN NT+I G M+ G++++ + ++ MI G D Y+ L+ G C+EG++
Sbjct: 351 -CPNNAILNTLINGYVMS-GQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSF 408
Query: 456 VMQIAHEMVTKKG 468
+ +EM +++G
Sbjct: 409 ARDLVNEM-SRRG 420
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIKA+ GN++ + + Q GA S N ++ L +V + A EF +
Sbjct: 571 LIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
V PD+ TY +++ G CK+G I+ A +FD V V+P+ YNT I+ CK+G + +A
Sbjct: 631 FV-PDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDA 689
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGL 271
+ G P+ LT+N ++Y L
Sbjct: 690 CSFFYRGIENGFVPSNLTWNVLVYTL 715
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 172/339 (50%), Gaps = 21/339 (6%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISK------LIKAYGDRGNVKAAIFWFHQ 148
Y + ++L+ +L+ A L + L +F+ LI+ G + A +F
Sbjct: 182 YNNLLNMLVKQNLVDEAVLLFRE--HLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQN 239
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV----VPPDVSTYTTMIRGY 204
+ SYN+L+ RVN I H ++KE++ V PDV TYT++I GY
Sbjct: 240 MGNFGCFPDIVSYNTLINGFCRVNEISKG----HDLLKEDMLIKGVSPDVITYTSIISGY 295
Query: 205 CKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
CK+G ++ A ++FD M +KPN +N +I+GF K G + A +M+ GC P+
Sbjct: 296 CKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+T+ ++I G C G V++ L +M++ NV T+ ++ LC + +A +LR+
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRH 415
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ + + P Y VI+GFCK GK DEA ++ EM+ + +P +F + G
Sbjct: 416 LKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGR 475
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+ AI +M +++C+P+ ++ N++I C+ K M +
Sbjct: 476 MVEAISTFYKMIEINCVPDEITINSLIS--CLLKAGMPN 512
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 172/335 (51%), Gaps = 10/335 (2%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
K+S F + L+ + V A+ F + + +YS+N L+ L R+ I A E
Sbjct: 176 KVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD----VMTVKPNLLAYNTMING 235
FF + P D+ +Y T+I G+C++ I + + V P+++ Y ++I+G
Sbjct: 236 FFQNMGNFGCFP-DIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISG 294
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
+CK G+++ A + +EM++ G +PN+ T+N +I G G + A ++ KM L G +
Sbjct: 295 YCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPD 354
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V T S++ G C G+ +Q + + N++P+V +Y V+IN CK + EA + L+
Sbjct: 355 VVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLR 414
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+++ + P F +N V + G++D A ++ +M + C P+ +++ +I G CM K
Sbjct: 415 HLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCM-K 473
Query: 416 GRMQDVEDLVDRMIRSGHNLDF----TMYSCLLKG 446
GRM + +MI D ++ SCLLK
Sbjct: 474 GRMVEAISTFYKMIEINCVPDEITINSLISCLLKA 508
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 151/301 (50%), Gaps = 5/301 (1%)
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VK 223
V+ R + L +FF + +TY ++R CK+G+ ++AK VFD M +
Sbjct: 82 VIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGIL 141
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+ +++ + + G+L+ AK +NE+ G + + YN ++ L VDEA +L
Sbjct: 142 PDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLL 201
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ F +V + +++GLC +G+ D+A + +N+ PD+ SY +INGFC+
Sbjct: 202 FREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCR 261
Query: 344 IGKSDEAISLLKE-MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ + + LLKE M +G+ P V ++ ++ + G++ A L +M PN
Sbjct: 262 VNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDF 321
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++N +I G G M+ + ++M+ G D ++ L+ GYC EG V +++ E
Sbjct: 322 TFNVLIDGFGKV-GNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEE 380
Query: 463 M 463
M
Sbjct: 381 M 381
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 115/227 (50%), Gaps = 4/227 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I Y G++KAA F + +++N L+ +V +++ A + +++
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+P DV T+T++I GYC+ G + K+++ M V+ PN+ Y +IN CK+ +
Sbjct: 349 LGCLP-DVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIR 407
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ + + + P YN +I G C G+VDEA ++A+M+ + + T ++
Sbjct: 408 EARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G C+ G+ +A+ ++E N PD + +I+ K G +EA
Sbjct: 468 IGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEA 514
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%)
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
TY+ ++ LC G D AK++ MR +G + S + ++ +GK D A +L V
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ Y ++N K DEA+ L +E P V+SFN + R L GE+
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
D+A + M C P+ VSYNT+I G C + + L + M+ G + D Y+
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290
Query: 443 LLKGYCEEGNVENVMQIAHEMVT 465
++ GYC+ G+++ ++ EMV+
Sbjct: 291 IISGYCKLGDMKAASELFDEMVS 313
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y G V + + + K +Y+Y L+ L + N I+ A F +
Sbjct: 359 TSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKS 418
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
VVP Y +I G+CK G ++ A + M K P+ + + +I G C KG +
Sbjct: 419 SEVVPKPF-IYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMV 477
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
EA +M+ C P+E+T N++I L G +EA +
Sbjct: 478 EAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 173/335 (51%), Gaps = 8/335 (2%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
++ LI Y G +K A + ++ I G +++YN L+ L + S+ A + ++
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNET-MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKG 240
+ + P+V TY ++ G CK G++E A V M+ + N + YN +I C+K
Sbjct: 416 MSRRGC-EPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKE 474
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++ A ++EM +GC+P+ TYN++IYGLC R+DEA L M L+G N T+
Sbjct: 475 KVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYN 534
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ L G F +A+ + +++ D +Y +I FCK+G ++ + L ++M
Sbjct: 535 TLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMD 594
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GL S N + L + G++D A L+ +P+ V+YN+++ GLC GR+++
Sbjct: 595 GLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV-GRIKE 653
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+L DR+ G D Y+ + C+EG V +
Sbjct: 654 ALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVND 688
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 174/343 (50%), Gaps = 11/343 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLY-SYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
++K YG G AI + + + SY+ +L +LV N ++A F+ ++ +
Sbjct: 153 IMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSK 212
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEE 244
V P V T+ +++ C +++A + MT PN + Y T+I+ +K ++ E
Sbjct: 213 G-VSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSE 271
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A K + EM GC P+ T+N +I+GLC ++ +A L+ +M L GF + T+ +L
Sbjct: 272 ALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLH 331
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE-MRARGLK 363
GLC +GK ++A R ++ P+ +ING+ G+ EA S L E M G +
Sbjct: 332 GLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQ 387
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +F++N + L + G L A L+ +M + C PN ++Y ++ GLC A G +++
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKA-GLLEEAGL 446
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ M G ++ +Y+CL+ C + V + + EM TK
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTK 489
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 136/251 (54%), Gaps = 4/251 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN L+ L R + +A ++ + PD+ TY ++I G CK+ I+ A ++F M
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGC-KPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ N + YNT+I+ ++G ++A +N+M+ RGC +++TYN +I C G +
Sbjct: 522 LLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNI 581
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
++ L +M ++G + + M+ GLC VGK D A +LR+ + PD+ +Y V
Sbjct: 582 EKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSV 641
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+NG CK+G+ EA++L ++ G++P F++N + G ++ A L + +
Sbjct: 642 LNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGF 701
Query: 398 LPNFVSYNTII 408
+P+ +++N ++
Sbjct: 702 VPSNLTWNVLV 712
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 149/312 (47%), Gaps = 12/312 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP-PDVSTYTTMIRGYCKMGMIENAKKVFD 218
+Y LL L R+ + A + +I P P+ + T+I GY G ++ A+ +
Sbjct: 325 TYGFLLHGLCRIGKLNEARKILIKI------PCPNNAILNTLINGYVMSGQLKEAQSFLN 378
Query: 219 VMTV----KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ +P++ YN +++G CK+G L A+ +NEM RGC PN +TY ++ GLC
Sbjct: 379 ETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKA 438
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G ++EA +++ +M G N + ++ LC K A+ L + PD+ +Y
Sbjct: 439 GLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTY 498
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G CK+ + DEA L M G ++N + L+ G +A+ L+ M
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C + ++YN +I C G ++ +L ++MI G D + ++ G C+ G V+
Sbjct: 559 RGCTLDKITYNGLIKAFCKV-GNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617
Query: 455 NVMQIAHEMVTK 466
N + + + +
Sbjct: 618 NAFEFLRDAINR 629
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L++YNSL+ L +V+ I A FH ++ + V +V TY T+I + G + A +
Sbjct: 495 LFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV-TYNTLIHALLRRGAFQKALTLV 553
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + + + YN +I FCK G +E+ + +M+ G + ++ N MI GLC
Sbjct: 554 NDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKV 613
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+VD A + GF ++ T+ S+L GLC VG+ +A+ + + PD +Y
Sbjct: 614 GKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTY 673
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
I+ CK G ++A G P+ ++N + L++ + +L ++
Sbjct: 674 NTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 147/313 (46%), Gaps = 12/313 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF--- 217
Y + L + KL ++ Q+ +E +V + S + +++ Y K G A ++
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRE-SIFMIIMKHYGKAGQPGQAIRLLLDM 173
Query: 218 -DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
V +P +Y+ ++ + A +M+++G P T+ ++ LC+
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNE 233
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD A L+ M +G N +++++ L + +A+ L + PDV+++
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G CK+ K +A L+ M RG P ++ + L G+L+ A +L ++P
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP--- 350
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDR-MIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
PN NT+I G M+ G++++ + ++ MI G D Y+ L+ G C+EG++
Sbjct: 351 -CPNNAILNTLINGYVMS-GQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSF 408
Query: 456 VMQIAHEMVTKKG 468
+ +EM +++G
Sbjct: 409 ARDLVNEM-SRRG 420
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIKA+ GN++ + + Q GA S N ++ L +V + A EF +
Sbjct: 571 LIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
V PD+ TY +++ G CK+G I+ A +FD V V+P+ YNT I+ CK+G + +A
Sbjct: 631 FV-PDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDA 689
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGL 271
+ G P+ LT+N ++Y L
Sbjct: 690 CLFFYRGIENGFVPSNLTWNVLVYTL 715
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 149/280 (53%), Gaps = 8/280 (2%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAK 246
V DV TY T+IRG C ++ A ++ M ++PN++ Y++++ G+CK G E+
Sbjct: 146 VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVG 205
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
K EM +G P+ + Y +I LC G+ +A +M M G + NV T+ ++ +
Sbjct: 206 KVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCM 265
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG---LK 363
C G +A+G L+ + E + PDV +Y +I G + + DEA+ LL+EM RG +K
Sbjct: 266 CKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM-VRGKNIVK 324
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V +FN+V + L + G + +A + M + C+ N V+YN +I GL +++ +
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH-KVRKAME 383
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L+D M G D YS L+KG+C+ V+ + M
Sbjct: 384 LMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM 423
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 199/452 (44%), Gaps = 84/452 (18%)
Query: 95 YTAITDVLLSHSLISIAASLLKN---SNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQ-- 148
YT + L + L A LL++ + +D LI+ D V A+ +
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
IE +YS SLL + + + F ++ E + PDV YT +I CK+G
Sbjct: 178 ESGIEPNVVVYS--SLLQGYCKSGRWEDVGKVFVEM-SEKGIEPDVVMYTGLIDSLCKVG 234
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+ A V D+M ++PN++ YN +IN CK+G ++EA + +M +G P+ +TYN
Sbjct: 235 KAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYN 294
Query: 266 AMIYGLCINGRVDEAKMLMAKM--RLNGFKDNVSTHKSMLKGLCVVGKFDQA-------- 315
+I GL +DEA L+ +M N K NV T S+++GLC +G+ QA
Sbjct: 295 TLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354
Query: 316 --------------------VGYLRNVMEA-------NMNPDVKSYEVVINGFCKIGKSD 348
V +R ME + PD +Y ++I GFCK+ + D
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
A LL MR RG++P +F + + + E G ++RA L +M L + V+Y+T+I
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-DVVAYSTMI 473
Query: 409 CGLCMA----------------------------------KGRMQDVEDLVDRMIRSGHN 434
G C A G M+ ++ +M SG
Sbjct: 474 HGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFL 533
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D ++ L++GY +G + V+++ EM+TK
Sbjct: 534 PDVAVFDSLIQGYSTKGEINKVLELIREMITK 565
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 151/293 (51%), Gaps = 12/293 (4%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTV------KPNLLAYNTMINGFCKKGELEEAK 246
D +Y T++ C+ G + A + M++ +PN ++Y ++ C ++A
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ M + G R + +TY +I GLC VD+A LM +M +G + NV + S+L+G
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+++ + E + PDV Y +I+ CK+GK+ +A ++ M RGL+P V
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++N + + + G + AI +LK+M + P+ V+YNT+I GL M + L++
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVL-EMDEAMWLLE 314
Query: 427 RMIRSGHNL---DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
M+R G N+ + ++ +++G C+ G + Q+ M+ + G ++ L +
Sbjct: 315 EMVR-GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV-RAMMEETGCMVNLVTY 365
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 163/319 (51%), Gaps = 6/319 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK-E 187
LI G+VK AI + + + +YN+L+ L V + A ++V+ +
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGK 320
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEE 244
N+V P+V T+ ++I+G C +G + A +V +M NL+ YN +I G + ++ +
Sbjct: 321 NIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRK 380
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + M+EM + G P+ TY+ +I G C +VD A+ L++ MR G + + + +L
Sbjct: 381 AMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLV 440
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
+C G ++A L N M+ N DV +Y +I+G CK G A LLK + GL P
Sbjct: 441 AMCEQGMMERARN-LFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTP 499
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+++ V + ++G+++ A +LKQM LP+ ++++I G KG + V +L
Sbjct: 500 DAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS-TKGEINKVLEL 558
Query: 425 VDRMIRSGHNLDFTMYSCL 443
+ MI LD + S L
Sbjct: 559 IREMITKNIALDSKIISTL 577
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 151/303 (49%), Gaps = 13/303 (4%)
Query: 213 AKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM---NRGCRPNELTYNAMIY 269
A + D + + ++YNT++ C++G + A + M + CRPN ++Y ++
Sbjct: 64 ATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMR 123
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
LC + D+A L+ MR G + +V T+ ++++GLC + D+AV + + E+ + P
Sbjct: 124 ALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEP 183
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+V Y ++ G+CK G+ ++ + EM +G++P V + + L + G+ +A ++
Sbjct: 184 NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 243
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
M + PN V+YN +I +C +G +++ ++ +M G D Y+ L+KG +
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMC-KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSD 302
Query: 450 EGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVVIM 509
++ M + EMV +G+ + N +T ++ G I R QV +M
Sbjct: 303 VLEMDEAMWLLEEMV--RGKNIVKPNVVT-------FNSVIQGLCDIGRMRQAFQVRAMM 353
Query: 510 ERT 512
E T
Sbjct: 354 EET 356
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 134/278 (48%), Gaps = 46/278 (16%)
Query: 97 AITDVLLSHSLISIAASLLKNSNKLSDFFIS--KLIKAYGDRGNVKAAIFWFHQAKQIEN 154
++DVL + + +++ N + ++ +I+ D G ++ A F +E
Sbjct: 299 GLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQA---FQVRAMMEE 355
Query: 155 GAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM---- 207
C L +YN L+G L+RV+ ++ A E ++ + PD TY+ +I+G+CKM
Sbjct: 356 TGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGL-EPDSFTYSILIKGFCKMWQVD 414
Query: 208 -------------------------------GMIENAKKVFDVM--TVKPNLLAYNTMIN 234
GM+E A+ +F+ M +++AY+TMI+
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIH 474
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
G CK G+L+ AK+ + +++ G P+ +TY+ +I +G ++ A ++ +M +GF
Sbjct: 475 GACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLP 534
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+V+ S+++G G+ ++ + +R ++ N+ D K
Sbjct: 535 DVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSK 572
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 188/375 (50%), Gaps = 29/375 (7%)
Query: 49 FSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLI 108
S+C G V + P+ +L F+ + + +P++ Y + +L+ + +
Sbjct: 90 LSICRGYGRVHR-------PFDSLRVFHKMKDFDCDPSQ-----KAYVTVLAILVEENQL 137
Query: 109 SIAASLLKNSNKL----SDFFISKLIKAY-GDRGNVKAAIFWFHQAKQIENGACLYSYNS 163
++A KN ++ + ++ LIKA + G V A + FH+ + Y+Y +
Sbjct: 138 NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGT 197
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-- 221
L+ L R I A++ F ++V+++ P V TYT++I G C ++ A + + M
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPT-VVTYTSLINGLCGSKNVDEAMRYVEEMKGK 256
Query: 222 -VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
++PN+ Y+++++G CK G +A + MM RGCRPN +TY +I GLC ++ EA
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD-------VKS 333
L+ +M L G K + + ++ G C V KF +A +L ++ + P+ VK+
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKT 376
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
V+ G C S A +L MR+RG+ V + +++ + L + GE +A+ L+ ++
Sbjct: 377 SNEVVRGLCTNYPS-RAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIV 435
Query: 394 QMDCLPNFVSYNTII 408
C+PN ++ +I
Sbjct: 436 TDGCIPNKGTWKLLI 450
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 198/424 (46%), Gaps = 22/424 (5%)
Query: 58 VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASL--- 114
V K++ + + ++ F+ A+ N Y H + + L+S + A +
Sbjct: 19 VIKLMRAEKDVEKSIAVFDSATAEYAN--GYLHDQSSFGYMVSRLVSANKFKAAEDIVAR 76
Query: 115 --LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
++N D +S + + YG ++ FH+ K + +Y ++L +LV N
Sbjct: 77 MKIENCVVSEDILLS-ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEEN 135
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM-GMIENAKKVFDVMTVK---PNLLA 228
+ LA +F+ + +E +PP V++ +I+ C+ G ++ K+F M + P+
Sbjct: 136 QLNLAFKFYKNM-REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYT 194
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y T+I+G C+ G ++EAKK EM+ + C P +TY ++I GLC + VDEA + +M+
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMK 254
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G + NV T+ S++ GLC G+ QA+ +M P++ +Y +I G CK K
Sbjct: 255 GKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY---- 404
EA+ LL M +GLKP + V + A L +M PN +++
Sbjct: 315 EAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHV 374
Query: 405 ---NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
N ++ GLC L M G +++ L+K C++G + +Q+
Sbjct: 375 KTSNEVVRGLCT--NYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVD 432
Query: 462 EMVT 465
E+VT
Sbjct: 433 EIVT 436
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 10/212 (4%)
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV-VGKFDQAVGY 318
++ ++ M+ L + A+ ++A+M++ +N + +L +C G+ +
Sbjct: 50 DQSSFGYMVSRLVSANKFKAAEDIVARMKI----ENCVVSEDILLSICRGYGRVHRPFDS 105
Query: 319 LR---NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
LR + + + +P K+Y V+ + + + A K MR GL PTV S N + +
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 376 LVEN-GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L N G +D + + +MP+ C P+ +Y T+I GLC GR+ + + L M+
Sbjct: 166 LCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRF-GRIDEAKKLFTEMVEKDCA 224
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+ G C NV+ M+ EM K
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYVEEMKGK 256
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%)
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
NG+ + S+ M+ L KF A + + N + G+ ++ + +
Sbjct: 45 NGYLHDQSSFGYMVSRLVSANKFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFD 104
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
++ + +M+ P+ ++ V ILVE +L+ A K M ++ P S N +I
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC G + + M + G + D Y L+ G C G ++ ++ EMV K
Sbjct: 165 ALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 45/167 (26%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +Y +L+ L + I+ A E ++ + + PD Y +I G+C + A
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGL-KPDAGLYGKVISGFCAVSKFREAANFL 355
Query: 218 DVMT---VKPNLLAYN-----------------------------------------TMI 233
D M + PN L +N +++
Sbjct: 356 DEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLV 415
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
CKKGE ++A + ++E++ GC PN+ T+ +I N V EA
Sbjct: 416 KCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNTIVGEA 462
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 175/362 (48%), Gaps = 6/362 (1%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
++ A++ + L + +++A+ +G + F + ++ N + +Y + + L
Sbjct: 202 ALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGL 261
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF----DVMTVKP 224
+ +K A ++V + + P+V T+T++I G CK+G E A ++F + KP
Sbjct: 262 CKRGYVKQAFHVLEEMVGKGL-KPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKP 320
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N+ Y MI G+CK+G+L A+ + M+ +G PN TY +I G C G D A LM
Sbjct: 321 NVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELM 380
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
KM+L GF N+ T+ +++ G C GK QA LR + PD +Y ++I CK
Sbjct: 381 NKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQ 440
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G A+ L +M P + ++ + + + +++++ L + + +P +Y
Sbjct: 441 GHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTY 500
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
++I G C G+ + +RM++ G D Y L+ G C+E +E + M+
Sbjct: 501 TSMIAGYCRV-GKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETML 559
Query: 465 TK 466
K
Sbjct: 560 DK 561
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 148/317 (46%), Gaps = 38/317 (11%)
Query: 185 VKENVVPPDVSTYTTMIR-GYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELE 243
++ + +P V T ++R G + +A++ FD M V+P+ ++ ++ G C++G E
Sbjct: 139 LRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGMGVRPDARSFRALVLGCCQEGRFE 198
Query: 244 EAKKCMNEMMNRG---------------CR--------------------PNELTYNAMI 268
EA + M G CR PN + Y A +
Sbjct: 199 EADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWV 258
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG-YLRNVMEANM 327
GLC G V +A ++ +M G K NV TH S++ GLC +G ++A +L+ V ++
Sbjct: 259 DGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSY 318
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P+V +Y V+I G+CK GK A LL M +GL P ++ + G DRA
Sbjct: 319 KPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFE 378
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L+ +M LPN +YN II G C KG++Q ++ G D Y+ L+ +
Sbjct: 379 LMNKMKLEGFLPNIYTYNAIIGGFC-KKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEH 437
Query: 448 CEEGNVENVMQIAHEMV 464
C++G++ + + ++M
Sbjct: 438 CKQGHITYALDLFNQMA 454
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 122/244 (50%), Gaps = 13/244 (5%)
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
G ++ A++ + M G RP+ ++ A++ G C GR +EA L+A M GF
Sbjct: 158 GLRQRHHFAHARQAFDGM---GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSL 214
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+ +T +++ C G+F G ++E P+V +Y ++G CK G +A +L
Sbjct: 215 DSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVL 274
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAI-LLLKQMPQMDCLPNFVSYNTIICGLCM 413
+EM +GLKP V++ ++ L + G +RA L LK + PN +Y +I G C
Sbjct: 275 EEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYC- 333
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKL 473
+G++ E L+ RM+ G + Y+ L+ G+C G+ + ++ ++M KL
Sbjct: 334 KEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKM--------KL 385
Query: 474 KNFL 477
+ FL
Sbjct: 386 EGFL 389
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y ++G + + AE ++V++ + P + +TYTT+I G+C+ G + A ++
Sbjct: 322 VHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP-NTNTYTTLIDGHCRGGSFDRAFELM 380
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M ++ PN+ YN +I GFCKKG++++A K + ++G P+++TY +I C
Sbjct: 381 NKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQ 440
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + A L +M N ++ T+ +++ C + +Q+ + + P ++Y
Sbjct: 441 GHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTY 500
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G+C++GKS A+ + + M G P ++ A+ L + L+ A L + M
Sbjct: 501 TSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLD 560
Query: 395 MDCLPNFVSYNTIICGLC 412
+P V+ T+ C
Sbjct: 561 KHMVPCDVTCVTLAYEYC 578
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 124/254 (48%), Gaps = 7/254 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+YN+++G + I+ A + + + P D TYT +I +CK G I A +F
Sbjct: 392 IYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCP-DKVTYTMLITEHCKQGHITYALDLF 450
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + P++ Y T+I +C++ ++E++++ ++ ++ G P + TY +MI G C
Sbjct: 451 NQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRV 510
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+ A + +M +G + T+ +++ GLC + ++A +++ +M P +
Sbjct: 511 GKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTC 570
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ +C+ K+ A+S L + R + +A+ R L LD A L LK +
Sbjct: 571 VTLAYEYCRRDKTTIAVSFLDGLDKR---QQAHAADALVRKLSAVDNLDAASLFLKNVLD 627
Query: 395 MDCLPNFVSYNTII 408
+ +Y + I
Sbjct: 628 KHYAVDHATYTSFI 641
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 174/345 (50%), Gaps = 5/345 (1%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
F + LI Y +G V++A F + K L ++ SL+ ++ + + ++
Sbjct: 245 FYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEM 304
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
K+ + +V Y +I K+G AK M+ +P+L+ YNT+IN FC +GE
Sbjct: 305 -KDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGE 363
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+EEA+K + + + RG PN+LTY +++G C G +A + +M +G + ++ ++ +
Sbjct: 364 VEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGA 423
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GL V G+ D A+ +M + PD Y V++NG K GK A +L EM +
Sbjct: 424 LIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQN 483
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P F + + + +G LD A L + + + P V YN +I G + G M +
Sbjct: 484 IAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKS-GMMDNA 542
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+D+M R+ H D +S ++ GY ++ N+ V++I MV +
Sbjct: 543 ILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQ 587
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 178/348 (51%), Gaps = 8/348 (2%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENG-ACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+S ++ AY D G V A+ +H ++ N Y+ NSLL +LV+ I+ A + + ++
Sbjct: 136 LSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEM 195
Query: 185 V-KENVVPPDVSTYTT--MIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
+ ++N V YTT M++G C G IE+ K+ + K PN++ YNT+I+G+CK
Sbjct: 196 IDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCK 255
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
KGE+E A K ++ +G P T+ +++ G C G + +L+ +M+ G NV
Sbjct: 256 KGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQM 315
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +++ +G +A L+ + E PD+ +Y +IN FC G+ +EA LL++
Sbjct: 316 YNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTI 375
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
RGL P ++ + + GE +A L +M + +SY +I GL +A G +
Sbjct: 376 RRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVA-GEV 434
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ DRM+ G D +Y+ L+ G ++G + + EM+ +
Sbjct: 435 DTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQ 482
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 155/324 (47%), Gaps = 8/324 (2%)
Query: 150 KQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
K++ C L +YN+L+ ++ AE+ Q ++ + P + TYT ++ GYCK
Sbjct: 337 KEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKL-TYTPLVHGYCK 395
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G A M+ ++ ++++Y +I+G GE++ A + MMNRG P+
Sbjct: 396 QGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANI 455
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YN ++ GL G++ AK+++ +M + + +++ G G D+A + ++
Sbjct: 456 YNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLII 515
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
E ++P V Y V+I GF K G D AI + +MR P +F+F+ + V+ ++
Sbjct: 516 EKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMN 575
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+ + M + +C PN V+Y ++I G C KG + E L M G YS L
Sbjct: 576 AVLKIFGLMVKQNCKPNVVTYTSLINGYC-RKGETKMAEKLFSMMRSHGLKPSVVTYSIL 634
Query: 444 LKGYCEEGNVENVMQIAHEMVTKK 467
+ +C+E + + M+ K
Sbjct: 635 IGSFCKEAKLGKAVSYFELMLINK 658
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 175/394 (44%), Gaps = 27/394 (6%)
Query: 95 YTAITDVLLSHSLISIAASLLKNS-------NKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
Y + + S + A LL+ + NKL+ + L+ Y +G A +
Sbjct: 351 YNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLT---YTPLVHGYCKQGEYTKATDYLI 407
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ + SY +L+ LV + A +++ ++P D + Y ++ G K
Sbjct: 408 EMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILP-DANIYNVLMNGLFKK 466
Query: 208 GMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G + AK + M + P+ Y T+++GF + G L+EAKK ++ +G P + Y
Sbjct: 467 GKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGY 526
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N MI G +G +D A + + KMR ++ T +++ G + + +++
Sbjct: 527 NVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVK 586
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
N P+V +Y +ING+C+ G++ A L MR+ GLKP+V +++ + + +L +
Sbjct: 587 QNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGK 646
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD-------------VEDLVDRMIRS 431
A+ + M C PN +++ ++ G K ED RMI
Sbjct: 647 AVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGD 706
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
G Y+C+L C++ V+ +Q+ ++M+
Sbjct: 707 GWTQKAAAYNCILICLCQQRMVKTALQLRNKMLA 740
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 133/290 (45%), Gaps = 20/290 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IK + G + AI + ++ + ++++++++ V+ +++ + F +VK+N
Sbjct: 529 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 588
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P+V TYT++I GYC+ G + A+K+F +M +KP+++ Y+ +I FCK+ +L +A
Sbjct: 589 C-KPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKA 647
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM--------------LMAKMRLNG 291
M+ C PN+ ++ ++ G ++ ++M +G
Sbjct: 648 VSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDG 707
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEA 350
+ + + +L LC A+ LRN M A + D S+ +I+G C G S E
Sbjct: 708 WTQKAAAYNCILICLCQQRMVKTAL-QLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEW 766
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
+++ G ++ + G + A +L+ M + PN
Sbjct: 767 RNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 81/155 (52%), Gaps = 16/155 (10%)
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAIL 387
P ++ V+ + +G D+A+ + + + P+ ++ N++ +LV++ ++ A
Sbjct: 131 PTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQ 190
Query: 388 LLKQMPQMD-----CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
L +M D C+ N+ + + ++ GLC+ KGR++D L++ G + Y+
Sbjct: 191 LYDEMIDRDNGDDICVDNYTT-SIMVKGLCL-KGRIEDGIKLIESRWGKGCVPNIVFYNT 248
Query: 443 LLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFL 477
L+ GYC++G VE+ A+++ K LK+K F+
Sbjct: 249 LIDGYCKKGEVES----AYKLFKK----LKMKGFI 275
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 114/270 (42%), Gaps = 56/270 (20%)
Query: 115 LKNSNKLSDFF-ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
++ ++ + D F S +I Y + N+ A + F + + +Y SL+ R
Sbjct: 549 MRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGE 608
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYN 230
K+AE+ F +++ + + P V TY+ +I +CK + A F++M + PN A++
Sbjct: 609 TKMAEKLF-SMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFH 667
Query: 231 TMINGF-------------------------------------------------CKKGE 241
++NGF C++
Sbjct: 668 YLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRM 727
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++ A + N+M+ G + +++ A+I+G+C+ G E + +++ LN + ++ S
Sbjct: 728 VKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMIS-CDLNEGELQIALKYS 786
Query: 302 M-LKGLCVVGKFDQAVGYLRNVMEANMNPD 330
+ L G +A G L+ +++ ++P+
Sbjct: 787 LELDKFIPEGGISEASGILQAMIKGYVSPN 816
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 209/424 (49%), Gaps = 38/424 (8%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLS----HSLISIAASLLKNSNKLSDFFI 126
A+ FN NP P + + I L+ H+++S++ + K + F
Sbjct: 70 AVSLFNRLLRQNPTPPAFE-----FNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNC 124
Query: 127 SKLIKAYGDRGNVKAAI---FWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFF 181
+ LI + G + I F FH K + G L SY +L+ L +V + A +
Sbjct: 125 NILIYCFCQLGLIPCQIHQAFLFHD-KLVALGFHLDQVSYGTLIHGLCKVGETRAALDLL 183
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
Q V +V + Y T+I G CK + +A ++ M K PN++ Y+ +I+GF
Sbjct: 184 -QRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 242
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G+L++A N+++ +P+ T+N ++ G C + ++ E K + A M G +V T
Sbjct: 243 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 302
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ S++ G C+V + + A + + +NPD++SY ++INGFCKI K D+A++L EM
Sbjct: 303 YNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 362
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL------- 411
+ + P V ++N++ L ++G + A+ L+ QM PN ++YN+II L
Sbjct: 363 CKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVD 422
Query: 412 ----CMAKGRMQDVED-------LVDRMIR-SGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ K + Q ++ L+D + + G+++ Y+ ++ G+C++G + + +
Sbjct: 423 KAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSL 482
Query: 460 AHEM 463
+M
Sbjct: 483 LSKM 486
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 150/301 (49%), Gaps = 24/301 (7%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + G +K AI F++ Y++N L+ + +K + F ++K
Sbjct: 234 SALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMK 293
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ ++P DV TY +++ GYC + + AK +F+ M V P++ +YN +INGFCK +++
Sbjct: 294 QGIIP-DVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVD 352
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A NEM + PN +TYN++I GL +GR+ A L+ +M G N+ T+ S++
Sbjct: 353 KAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSII 412
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPD--------------------VKSYEVVINGFCK 343
L + D+A+ + + + P V +Y V+I+GFCK
Sbjct: 413 DALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCK 472
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G DEA+SLL +M+ P ++ R L++N E D+A L ++M L S
Sbjct: 473 KGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSAS 532
Query: 404 Y 404
Y
Sbjct: 533 Y 533
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 172/371 (46%), Gaps = 27/371 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS---TYTTMIRGYCKMGMIENAKKV 216
SY+S N + A F++++++N PP ++++ ++ ++K+
Sbjct: 53 SYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKM 112
Query: 217 FDVMTVKPNLLAYNTMINGFCKKG----ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ +KPNL N +I FC+ G ++ +A ++++ G ++++Y +I+GLC
Sbjct: 113 -EFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLC 171
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G A L+ ++ + N + +++ G+C + A ++ ++P+V
Sbjct: 172 KVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVV 231
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y +I+GF +GK +AI L ++ +KP ++FN + ++ ++ + M
Sbjct: 232 TYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMM 291
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ +P+ V+YN+++ G C+ K + + + + M + G N D Y+ L+ G+C+
Sbjct: 292 MKQGIIPDVVTYNSLMDGYCLVK-EVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKK 350
Query: 453 VENVMQIAHEM------------------VTKKGRLLKLKNFLTRVVDALLLMWIVTGGS 494
V+ M + +EM ++K GR+ + ++ D + I+T S
Sbjct: 351 VDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNS 410
Query: 495 WISRFVFVHQV 505
I HQV
Sbjct: 411 IIDALFKTHQV 421
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 153/292 (52%), Gaps = 6/292 (2%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
+F Q ++ + D+ ++T +I +C+ + A V M +P+++ + ++++GF
Sbjct: 92 YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGF 151
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C + +A + M+ G PN + YN +I GLC NG ++ A L+ +M G +V
Sbjct: 152 CLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV 211
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ ++L GLC G++ A LR++M+ ++NPDV ++ +I+ F K G DEA L KE
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M + P ++N++ L +G L A M C PN V+YNT+I G C K
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC--KF 329
Query: 417 RMQDVE-DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
RM D L RM G N D Y+ L+ GYC+ G + + I MV+++
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 158/294 (53%), Gaps = 5/294 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-DV 219
YN+L+ L + + +A E +++ K+ + DV TY T++ G C G +A ++ D+
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGL-GADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 220 M--TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
M ++ P+++ + +I+ F K+G L+EA++ EM+ PN +TYN++I GLC++GR+
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+AK M G NV T+ +++ G C D+ + + + N D+ +Y +
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G+C++GK A+ + M +R + P + + + L NGE++ A++ M + +
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
V+YN +I GLC A +++ +L R+ G D Y+ ++ G C+ G
Sbjct: 418 YIGIVAYNIMIHGLCKAD-KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 129/238 (54%), Gaps = 4/238 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +L+ V V+ ++ A+E + ++++ +V P +V TY ++I G C G + +AKK FD+
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV-TYNSIINGLCMHGRLYDAKKTFDL 306
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ YNT+I+GFCK ++E K M G + TYN +I+G C G+
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ A + M ++ TH +L GLCV G+ + A+ ++ E+ + +Y +
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G CK K ++A L + G+KP ++ + L +NG A L+++M +
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 122/239 (51%), Gaps = 4/239 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI + +GN+ A + + Q +YNS++ L + A++ F +
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ P +V TY T+I G+CK M++ K+F M+ + ++ YNT+I+G+C+ G+L
Sbjct: 310 KGCFP-NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A M++R P+ +T+ +++GLC+NG ++ A + MR + + + M+
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI 428
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
GLC K ++A + + PD ++Y ++I G CK G EA L++ M+ G+
Sbjct: 429 HGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 124/280 (44%), Gaps = 49/280 (17%)
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
++T NL Y T+I F +K EL G + ++ +I+ C R+
Sbjct: 77 LLTATANLRRYETVIY-FSQKMEL------------YGISHDLYSFTILIHCFCRCSRLS 123
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV---------GYLRNVMEAN--- 326
A ++ KM G++ ++ T S+L G C+V + A GY NV+ N
Sbjct: 124 FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI 183
Query: 327 -----------------------MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+ DV +Y ++ G C G+ +A +L++M R +
Sbjct: 184 DGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V +F A+ + V+ G LD A L K+M Q PN V+YN+II GLCM GR+ D +
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM-HGRLYDAKK 302
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D M G + Y+ L+ G+C+ V+ M++ M
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
GF E+A EM++ P+ + + ++ R + KM L G
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
++ + ++ C + A+ L +M+ P + ++ +++GFC + + +A SL
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
+ M G +P V +N + L +NGEL+ A+ LL +M + + V+YNT++ GLC
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ GR D ++ M++ N D ++ L+ + ++GN++ ++ EM+
Sbjct: 224 S-GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 160/305 (52%), Gaps = 9/305 (2%)
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYT--TMIRGYCKMGMIENAKKVFDVMT---VKP 224
R LAEE + ++ + +V+ YT M+ YCK + A V M V P
Sbjct: 134 RAGWPHLAEEAYRLVLSSD---SEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFP 190
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+++ +N +I+ + G+++ A ++ M N+G +P +T+N+++ GLC + R D+AK +
Sbjct: 191 DVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF 250
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M +V + ++ G C VG+ ++A+ + + + + + PDV S+ +I F
Sbjct: 251 RAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTR 310
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
GK D A + L+EM+ GL P + V G + A+ + +M + CLP+ V+Y
Sbjct: 311 GKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTY 370
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
NT++ GLC + R+ D E+L++ M G D ++ L+ GYC +GN E +Q+ ++
Sbjct: 371 NTLLNGLC-KQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL 429
Query: 465 TKKGR 469
++ R
Sbjct: 430 HQRLR 434
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 165/317 (52%), Gaps = 5/317 (1%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
F Q + S+N L+G RV ++ A +F+ ++ + V P DV +++ +I +
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTP-DVVSFSCLIGLFS 308
Query: 206 KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
G +++A M + P+ + Y +I GFC+ G + EA + +EM+ GC P+ +
Sbjct: 309 TRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVV 368
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
TYN ++ GLC R+ +A+ L+ +M+ G ++ T +++ G C G F++A+ +
Sbjct: 369 TYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTL 428
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ + PDV +Y +I+G C+ G +A L +M AR + P +++ + E G++
Sbjct: 429 LHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQV 488
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
+ A L +M LPN ++YN+II G C + G ++ + + +M++ D ++
Sbjct: 489 EEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRS-GNVKKGQQFLQKMMQDNILPDLITFNT 547
Query: 443 LLKGYCEEGNVENVMQI 459
L+ GY +E N+ +
Sbjct: 548 LIHGYIKEENMHGAFNV 564
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 174/339 (51%), Gaps = 5/339 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A G+V AAI + ++NS+L L + A+E F + + +
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF-RAMDQC 256
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V PDV ++ +I G+C++G +E A K + M V P++++++ +I F +G+++ A
Sbjct: 257 SVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHA 316
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ EM G P+ + Y +I G C G + EA + +M G +V T+ ++L G
Sbjct: 317 AAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNG 376
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + A L + E + PD+ ++ +I+G+C+ G ++A+ L + + L+P
Sbjct: 377 LCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPD 436
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V ++N++ + G+L +A L M + PN V+Y+ +I C KG++++ +
Sbjct: 437 VVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHC-EKGQVEEAFGFL 495
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D M+ G+ + Y+ ++KGYC GNV+ Q +M+
Sbjct: 496 DEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMM 534
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 155/310 (50%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ R + A + + + P + T+ ++++G CK + AK+VF
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGL-KPGIVTFNSVLKGLCKHRRFDKAKEVFRA 252
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +V P++ ++N +I GFC+ GE+EEA K EM RG P+ ++++ +I G+
Sbjct: 253 MDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGK 312
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A + +M+ G + + ++ G C G +A+ ++ PDV +Y
Sbjct: 313 MDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNT 372
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++NG CK + +A LL EM+ RG+ P + +F + +G ++A+ L +
Sbjct: 373 LLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR 432
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+YN++I G+C KG + +L D M + YS L+ +CE+G VE
Sbjct: 433 LRPDVVAYNSLIDGMC-RKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEA 491
Query: 457 MQIAHEMVTK 466
EMV+K
Sbjct: 492 FGFLDEMVSK 501
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 155/280 (55%), Gaps = 5/280 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+LL L + + + AEE +++ KE V PD+ T+TT+I GYC+ G E A ++FD
Sbjct: 369 TYNTLLNGLCKQHRLLDAEELLNEM-KERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDT 427
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ ++P+++AYN++I+G C+KG+L +A + ++M R PN +TY+ +I C G+
Sbjct: 428 LLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQ 487
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+EA + +M G N+ T+ S++KG C G + +L+ +M+ N+ PD+ ++
Sbjct: 488 VEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNT 547
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+ K A ++ M ++P ++N + E G ++ A + K+M
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASG 607
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
P+ +Y ++I G A G ++ L D M+ G D
Sbjct: 608 IEPDRYTYMSLINGHVTA-GNSKEAFQLHDEMMHRGFAPD 646
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 177/375 (47%), Gaps = 38/375 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G V+ A+ ++ + +Q + S++ L+G+ + A + ++
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+VP D YT +I G+C+ G + A +V D M P+++ YNT++NG CK+ L +A
Sbjct: 328 LVP-DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDA 386
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ +NEM RG P+ T+ +I+G C +G ++A L + + +V + S++ G
Sbjct: 387 EELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDG 446
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+C G +A ++ + P+ +Y ++I+ C+ G+ +EA L EM ++G P
Sbjct: 447 MCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPN 506
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA----------- 414
+ ++N++ + +G + + L++M Q + LP+ +++NT+I G
Sbjct: 507 IMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFN 566
Query: 415 -----------------------KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+G M++ + +M SG D Y L+ G+ G
Sbjct: 567 IMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAG 626
Query: 452 NVENVMQIAHEMVTK 466
N + Q+ EM+ +
Sbjct: 627 NSKEAFQLHDEMMHR 641
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 93/169 (55%), Gaps = 4/169 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI ++ ++G V+ A + + N + +YNS++ R ++K ++F ++++
Sbjct: 476 SILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQ 535
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+N++ PD+ T+ T+I GY K + A VF++M V+P+ + YN +INGF ++G +E
Sbjct: 536 DNIL-PDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNME 594
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
EA + +M G P+ TY ++I G G EA L +M GF
Sbjct: 595 EAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGF 643
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 100/244 (40%), Gaps = 37/244 (15%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ LI Y GN + A+ F + +YNSL+ + R + A E + +
Sbjct: 405 FTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMH 464
Query: 186 KENVVP----------------------------------PDVSTYTTMIRGYCKMGMIE 211
+ P P++ TY ++I+GYC+ G ++
Sbjct: 465 AREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVK 524
Query: 212 NAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
++ M + P+L+ +NT+I+G+ K+ + A N M +P+ +TYN +I
Sbjct: 525 KGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMII 584
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
G G ++EA + KM +G + + T+ S++ G G +A +M
Sbjct: 585 NGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFA 644
Query: 329 PDVK 332
PD K
Sbjct: 645 PDDK 648
>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
contains a PPR repeat domain PF|01535 [Arabidopsis
thaliana]
Length = 797
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y++++ L R ++ A F + + + P V ++ +++ GYCK+G ++ AK F
Sbjct: 201 HTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 259
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ + P++ ++N +ING C G + EA + ++M G P+ +TYN + G + G
Sbjct: 260 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 319
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD-VKSY 334
+ A ++ M G +V T+ +L G C +G D + L++++ + +
Sbjct: 320 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 379
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+++G CK G+ DEA+SL +M+A GL P + +++ V L + G+ D A+ L +M
Sbjct: 380 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 439
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
LPN ++ ++ GLC KG + + L+D +I SG LD +Y+ ++ GY + G +E
Sbjct: 440 KRILPNSRTHGALLLGLC-QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 498
Query: 455 NVMQI 459
+++
Sbjct: 499 EALEL 503
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 136/282 (48%), Gaps = 5/282 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP----NLLAYNTMINGFCKKGELEEA 245
+ PDV TYT ++ G C++G I+ + M + +++ + M++G CK G ++EA
Sbjct: 336 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 395
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
N+M G P+ + Y+ +I+GLC G+ D A L +M N TH ++L G
Sbjct: 396 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 455
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G +A L +++ + D+ Y +VI+G+ K G +EA+ L K + G+ P+
Sbjct: 456 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 515
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V +FN++ + + A +L + P+ VSY T++ G + +++L
Sbjct: 516 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC-GNTKSIDELR 574
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
M G YS + KG C EN + E + +K
Sbjct: 575 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 616
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 168/346 (48%), Gaps = 19/346 (5%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G + A+ F+Q K L +Y+ ++ L ++ +A + ++ + ++P + T
Sbjct: 390 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP-NSRT 448
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ ++ G C+ GM+ A+ + D + +++ YN +I+G+ K G +EEA + ++
Sbjct: 449 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 508
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G P+ T+N++IYG C + EA+ ++ ++L G +V ++ +++ G
Sbjct: 509 ETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN-T 567
Query: 314 QAVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKE------------MRAR 360
+++ LR M+A + P +Y V+ G C+ K + +L+E M +
Sbjct: 568 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 627
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+ P ++N + + L L A + L+ M + + +YN +I LC+ G ++
Sbjct: 628 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY-GYIRK 686
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + + +L Y+ L+K +C +G+ E +++ H+++ +
Sbjct: 687 ADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 732
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 144/314 (45%), Gaps = 32/314 (10%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ + I+ A E F ++V E + P V+T+ ++I GYCK I A+K+ DV+
Sbjct: 484 YNIVIDGYAKSGCIEEALELF-KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 542
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC----- 272
+ P++++Y T+++ + G + + EM G P +TY+ + GLC
Sbjct: 543 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 602
Query: 273 ------INGRV-DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+ R+ ++ K + M G + T+ ++++ LC V A +L +
Sbjct: 603 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 662
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
N++ +Y ++I+ C G +A S + ++ + + + F++ + + G+ + A
Sbjct: 663 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 722
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLC---------------MAKGRMQDVEDLVDRMIR 430
+ L Q+ + Y+ +I LC +++G D+ D+ + MI+
Sbjct: 723 VKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL-DICEVMIK 781
Query: 431 SGHNLDFTMYSCLL 444
S L +T+ LL
Sbjct: 782 SDELLSWTIKWGLL 795
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 116/237 (48%), Gaps = 9/237 (3%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+YN+++ F + ++ + K + + NE TY+ ++ GLC ++++A + +
Sbjct: 174 SYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTS 226
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+V + S++ G C +G D A + V++ + P V S+ ++ING C +G
Sbjct: 227 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 286
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
EA+ L +M G++P ++N + + G + A +++ M P+ ++Y +
Sbjct: 287 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 346
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM-YSCLLKGYCEEGNVENVMQIAHEM 463
+CG C G + L+ M+ G L+ + S +L G C+ G ++ + + ++M
Sbjct: 347 LCGQCQL-GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 402
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N T+ +++ GLC K + AV +LR ++ P V S+ +++G+CK+G D A S
Sbjct: 199 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 258
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG---L 411
+ GL P+V+S N + L G + A+ L M + P+ V+YN + G L
Sbjct: 259 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 318
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M G + + D++D+ G + D Y+ LL G C+ GN++ + + +M+++
Sbjct: 319 GMISGAWEVIRDMLDK----GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 369
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 20/238 (8%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
SY +L+ + K +E ++ E + P +V TY+ + +G C+ EN V
Sbjct: 553 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV-TYSVIFKGLCRGWKHENCNHVLRE 611
Query: 218 -------------DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
+ + P+ + YNT+I C+ L A + M +R + TY
Sbjct: 612 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 671
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I LC+ G + +A + ++ + + +++K CV G + AV ++
Sbjct: 672 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 731
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
N ++ Y VIN C+ +E+ M ++G+ P + + +++++ EL
Sbjct: 732 RGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL----DICEVMIKSDEL 785
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 192/408 (47%), Gaps = 40/408 (9%)
Query: 98 ITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC 157
++D++ + + ++K+ S +KL+ A + I Q + +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+Y+ + R + + LA +++K PD+ T ++++ GYC I +A +
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGY-EPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M KP+ + T+I+G + EA +++M+ RGC+P+ +TY ++ GLC
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 275 GRVDEA-----KMLMAKMRLN------------------------------GFKDNVSTH 299
G +D A KM A+++ N G + NV T+
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S++ LC G++ A L N++E +NP+V ++ +I+ F K GK EA L +EM
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
R + P ++N + + LD A + K M DCLPN +YNT+I G C K R++
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK-RVE 415
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D +L M + G + Y+ +++G+ + G+ ++ + +MV+ +
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 170/334 (50%), Gaps = 12/334 (3%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG++ A+ ++ + A + +N+++ L + +++A + F ++ + + P+V
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI-RPNVV 294
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY ++I C G +A ++ M + PN++ +N +I+ F K+G+L EA+K EM
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ R P+ +TYN +I G C++ R+DEAK + M N+ T+ +++ G C +
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+ V R + + + + +Y +I GF + G D A + K+M + + + +++ +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L G+LD A+++ K + + + N YNT+I G+C A G++ + DL +
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA-GKVGEAWDLFCSL---S 530
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ ++ G C + ++Q A ++ K
Sbjct: 531 IKPDVVTYNTMISGLCS----KRLLQEADDLFRK 560
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 130/252 (51%), Gaps = 7/252 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+L+ + + AE+ ++++ ++ PD TY +I G+C ++ AK++F
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSI-DPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN+ YNT+INGFCK +E+ + EM RG N +TY +I G G
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+M+ +M N ++ T+ +L GLC GK D A+ + + ++ M ++ Y
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK GK EA L + +KP V ++N + L L A L ++M +
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 397 CLPNFVSYNTII 408
LPN +YNT+I
Sbjct: 566 TLPNSGTYNTLI 577
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I+ + G+ +A F Q + +Y+ LL L + A F + K
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAK 246
+ ++ Y TMI G CK G + A +F +++KP+++ YNTMI+G C K L+EA
Sbjct: 497 SEM-ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+M G PN TYN +I + + L+ +MR +GF + ST S++ +
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST-ISLVTNM 614
Query: 307 CVVGKFDQA 315
G+ D++
Sbjct: 615 LHDGRLDKS 623
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
E++ N I K D+A+ L +M P++ FN + + + + + I L +QM
Sbjct: 52 EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ + +Y+ I C + ++ ++ +M++ G+ D S LL GYC +
Sbjct: 112 LGISHDLYTYSIFINCFC-RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 455 NVMQIAHEMV 464
+ + + +MV
Sbjct: 171 DAVALVDQMV 180
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 172/339 (50%), Gaps = 21/339 (6%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISK------LIKAYGDRGNVKAAIFWFHQ 148
Y + ++L+ +L+ A L + L +F+ LI+ G + A +F
Sbjct: 182 YNNLLNMLVKQNLVDEAVLLFRE--HLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQN 239
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV----VPPDVSTYTTMIRGY 204
+ SYN+L+ RVN I H ++KE++ V PDV TYT++I GY
Sbjct: 240 MGNFGCFPDIVSYNTLINGFCRVNEISKG----HDLLKEDMLIKGVSPDVITYTSIISGY 295
Query: 205 CKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
CK+G ++ A ++FD M +KPN +N +I+GF K G + A +M+ GC P+
Sbjct: 296 CKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+T+ ++I G C G V++ L +M++ NV T+ ++ LC + +A +LR+
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRH 415
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ + + P Y VI+GFCK GK DEA ++ EM+ + +P +F + G
Sbjct: 416 LKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGR 475
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+ AI +M +++C+P+ ++ N++I C+ K M +
Sbjct: 476 MVEAISTFYKMIEINCVPDEITINSLIS--CLLKAGMPN 512
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 172/335 (51%), Gaps = 10/335 (2%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
K+S F + L+ + V A+ F + + +YS+N L+ L R+ I A E
Sbjct: 176 KVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD----VMTVKPNLLAYNTMING 235
FF + P D+ +Y T+I G+C++ I + + V P+++ Y ++I+G
Sbjct: 236 FFQNMGNFGCFP-DIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISG 294
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
+CK G+++ A + +EM++ G +PN+ T+N +I G G + A ++ KM L G +
Sbjct: 295 YCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPD 354
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V T S++ G C G+ +Q + + N++P+V +Y V+IN CK + EA + L+
Sbjct: 355 VVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLR 414
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+++ + P F +N V + G++D A ++ +M + C P+ +++ +I G CM K
Sbjct: 415 HLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCM-K 473
Query: 416 GRMQDVEDLVDRMIRSGHNLDF----TMYSCLLKG 446
GRM + +MI D ++ SCLLK
Sbjct: 474 GRMVEAISTFYKMIEINCVPDEITINSLISCLLKA 508
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 151/301 (50%), Gaps = 5/301 (1%)
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VK 223
V+ R + L +FF + +TY ++R CK+G+ ++AK VFD M +
Sbjct: 82 VIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGIL 141
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+ +++ + + G+L+ AK +NE+ G + + YN ++ L VDEA +L
Sbjct: 142 PDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLL 201
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ F +V + +++GLC +G+ D+A + +N+ PD+ SY +INGFC+
Sbjct: 202 FREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCR 261
Query: 344 IGKSDEAISLLKE-MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ + + LLKE M +G+ P V ++ ++ + G++ A L +M PN
Sbjct: 262 VNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDF 321
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++N +I G G M+ + ++M+ G D ++ L+ GYC EG V +++ E
Sbjct: 322 TFNVLIDGFGKV-GNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEE 380
Query: 463 M 463
M
Sbjct: 381 M 381
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 115/227 (50%), Gaps = 4/227 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I Y G++KAA F + +++N L+ +V +++ A + +++
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+P DV T+T++I GYC+ G + K+++ M V+ PN+ Y +IN CK+ +
Sbjct: 349 LGCLP-DVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIR 407
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA+ + + + P YN +I G C G+VDEA ++A+M+ + + T ++
Sbjct: 408 EARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G C+ G+ +A+ ++E N PD + +I+ K G +EA
Sbjct: 468 IGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEA 514
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%)
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
TY+ ++ LC G D AK++ MR +G + S + ++ +GK D A +L V
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ Y ++N K DEA+ L +E P V+SFN + R L GE+
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
D+A + M C P+ VSYNT+I G C + + L + M+ G + D Y+
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290
Query: 443 LLKGYCEEGNVENVMQIAHEMVT 465
++ GYC+ G+++ ++ EMV+
Sbjct: 291 IISGYCKLGDMKAASELFDEMVS 313
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y G V + + + K +Y+Y L+ L + N I+ A F +
Sbjct: 359 TSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKS 418
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
VVP Y +I G+CK G ++ A + M K P+ + + +I G C KG +
Sbjct: 419 SEVVPKPF-IYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMV 477
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
EA +M+ C P+E+T N++I L G +EA +
Sbjct: 478 EAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 162/336 (48%), Gaps = 11/336 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++ Y GN+ AA + ++YN L+ L + A F ++
Sbjct: 134 MVNGYCRAGNIDAARRMIDSVPFAPD---TFTYNPLIRALCVRGCVLDALAVFDDMLHRG 190
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P V TY+ ++ CK + A + D M K P+++ YN +IN C +G++ EA
Sbjct: 191 C-SPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEA 249
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K +N + + GC+P+ +TY ++ LC + R +EA L+ KM N + T +++
Sbjct: 250 LKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITS 309
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK-- 363
LC G +A L + E PD+ +Y +++G CK + DEAI LLKE+ A +
Sbjct: 310 LCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKN 369
Query: 364 --PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P +FN + L + G DRAI ++ +M + C+P+ +YN I+ G + ++
Sbjct: 370 CIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEA 429
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
DL++ M+ +G D T Y L G E +E +
Sbjct: 430 LDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAI 465
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 159/333 (47%), Gaps = 11/333 (3%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG + A+ H + N L+ L + AE + +
Sbjct: 74 RGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPSATI----I 129
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
TY TM+ GYC+ G I+ A+++ D + P+ YN +I C +G + +A ++M++R
Sbjct: 130 TYNTMVNGYCRAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHR 189
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
GC P+ +TY+ ++ C +A +L+ +MR G + ++ T+ ++ +C G +A
Sbjct: 190 GCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEA 249
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ L ++ PD +Y V+ C + +EA LL +M + P +FNAV
Sbjct: 250 LKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITS 309
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD-----VEDLVDRMIR 430
L + G + RA +L QM + C P+ ++Y++I+ GLC K R D +++L+ M+
Sbjct: 310 LCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLC--KERRVDEAIKLLKELLAEMVS 367
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D ++ ++ C++G + +++ EM
Sbjct: 368 KNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEM 400
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 166/342 (48%), Gaps = 12/342 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ A K A+ + + + +YN L+ + + A + + +
Sbjct: 199 SILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPS 258
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
PD TYT +++ C E A K+ M P+ + +N +I C+KG +
Sbjct: 259 YGC-KPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVG 317
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA----KMLMAKM-RLNGFKDNVST 298
A K + +M GC P+ +TY++++ GLC RVDEA K L+A+M N D V T
Sbjct: 318 RATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQV-T 376
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF-CKIGKSDEAISLLKEM 357
+++ LC G FD+A+ + + E PD+ +Y +++GF CK K++EA+ LL M
Sbjct: 377 FNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLM 436
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ GL P ++ ++ L E++RAI + +++ M P+ + YN I+ GLC K R
Sbjct: 437 VSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLC-KKWR 495
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
D M+ +G D + Y L++G EG +E ++
Sbjct: 496 TDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKEL 537
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 122/241 (50%), Gaps = 9/241 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+++ L + + A + Q+ E+ PD+ TY++++ G CK ++ A K+
Sbjct: 302 TFNAVITSLCQKGFVGRATKVLAQM-SEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKE 360
Query: 220 MTVK-------PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG-L 271
+ + P+ + +NT+I C+KG + A K ++EM GC P+ TYN ++ G L
Sbjct: 361 LLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFL 420
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C + + +EA L+ M NG + +T+KS+ GL + ++A+G R V ++PD
Sbjct: 421 CKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDK 480
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
Y ++ G CK ++D AI M + G P ++ + + G L+ A LL
Sbjct: 481 MLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGN 540
Query: 392 M 392
+
Sbjct: 541 L 541
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 141/311 (45%), Gaps = 18/311 (5%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
N++ + Q + AL N + P+ YT + L S A LL
Sbjct: 234 NVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVT-----YTPVLKSLCSSERWEEADKLL 288
Query: 116 ----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV-- 169
N + + +I + +G V A Q + + +Y+S++ L
Sbjct: 289 TKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKE 348
Query: 170 -RVN-SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---P 224
RV+ +IKL +E ++V +N +P D T+ T+I C+ G+ + A KV D M+ P
Sbjct: 349 RRVDEAIKLLKELLAEMVSKNCIP-DQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIP 407
Query: 225 NLLAYNTMINGF-CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
++ YN +++GF CK + EEA +N M++ G P+ TY ++ +GL ++ A +
Sbjct: 408 DITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGM 467
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+++ G + + ++L GLC + D A+ + ++ PD +Y +++ G
Sbjct: 468 FRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAY 527
Query: 344 IGKSDEAISLL 354
G +EA LL
Sbjct: 528 EGFLEEAKELL 538
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 213/473 (45%), Gaps = 22/473 (4%)
Query: 1 MATPRRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTK 60
M PR + T + L ++ + +Q+ + P+ I P F L S
Sbjct: 1 MFLPRVNGTRFRPLIASRRLFSASAASLQQYCTEKPT---IKPWPQRLFPKRLVS----- 52
Query: 61 VIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASL---LKN 117
+I +Q N AL F +A +P + H Y +I L SL L+N
Sbjct: 53 MITQQQNIDLALQIFLYAGKSHPG---FTHNYDTYHSILFKLSRARAFDPVESLMADLRN 109
Query: 118 SN---KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSI 174
S K + L++ YG G ++++ F + + S N+LL VL++
Sbjct: 110 SYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF 169
Query: 175 KLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNT 231
L F + + P++ T +++ CK IE+A KV D M + PNL+ Y T
Sbjct: 170 DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTT 229
Query: 232 MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG 291
++ G+ +G++E AK+ + EM++RG P+ +TY ++ G C GR EA +M M N
Sbjct: 230 ILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNE 289
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
+ N T+ M++ LC K +A +++ + PD VI+ C+ K DEA
Sbjct: 290 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEAC 349
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
L ++M P + + L + G + A L + + +P+ ++YNT+I G+
Sbjct: 350 GLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDK-GSIPSLLTYNTLIAGM 408
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
C KG + + L D M + Y+ L++G + GNV+ +++ EM+
Sbjct: 409 C-EKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEML 460
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 104/180 (57%), Gaps = 6/180 (3%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFC 237
+ +++K N +P D + +T+I CK G + A+K+FD P+LL YNT+I G C
Sbjct: 351 LWRKMLKNNCMP-DNALLSTLIHWLCKEGRVSEARKLFDEFDKGSIPSLLTYNTLIAGMC 409
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+KGEL EA + ++M R C+PN TYN +I GL NG V E ++ +M +G N +
Sbjct: 410 EKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKT 469
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T + +GL +GK + A+ + ++ N D +S+E+ +N F +G+ D+ + LKE+
Sbjct: 470 TFLILFEGLQKLGKEEDAIKIV-SMAVMNGKVDKESWELFLNKF--VGELDKGVLALKEL 526
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 153/371 (41%), Gaps = 77/371 (20%)
Query: 97 AITDVLLSHSLISIAASLLKNSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQ 151
+ +VL+ + + ++ KNS + + F + L+KA + ++++A +
Sbjct: 158 TLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPA 217
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
+ L +Y ++LG V ++ A+ +++ P D TYT ++ GYCK+G
Sbjct: 218 MGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYP-DAITYTVLMDGYCKLGRFS 276
Query: 212 NAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG------------ 256
A V D M ++PN + Y MI CK+ + EA+ +EM++R
Sbjct: 277 EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVI 336
Query: 257 -----------------------CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
C P+ + +I+ LC GRV EA+ L + G
Sbjct: 337 DALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFD-KGSI 395
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
++ T+ +++ G+C G+ +A ++ E P+ +Y V+I G K G E + +
Sbjct: 396 PSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRV 455
Query: 354 LKEMRARGLKPTVFSFNAVFRIL----------------VENG----------------E 381
L+EM G P +F +F L V NG E
Sbjct: 456 LEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNGKVDKESWELFLNKFVGE 515
Query: 382 LDRAILLLKQM 392
LD+ +L LK++
Sbjct: 516 LDKGVLALKEL 526
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 160/311 (51%), Gaps = 5/311 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++YN L+ L + I+ A + ++ E V P + TY +++ YC G ++ A K++
Sbjct: 387 FTYNILIHWLCQRRKIREALNLWEKM-NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYT 445
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K PN++ Y T++ G K ++A + EM G N+ TYN +I GLC+ G
Sbjct: 446 EMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVG 505
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
RV E ++ + GF T+ S++ G G A + + + P++ +Y
Sbjct: 506 RVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYT 565
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
I+G+CK D A+ +L ++R +GL+P + ++N++ + G + A+ +L M +
Sbjct: 566 SFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKD 625
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
LPN YN+ I G K M++ ++MI+ G +LD Y+ L+ G+ ++GNV
Sbjct: 626 GLLPNISVYNSFITGYKNLK-MMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTF 684
Query: 456 VMQIAHEMVTK 466
+++ EMV K
Sbjct: 685 ALKLYSEMVAK 695
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 162/321 (50%), Gaps = 5/321 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+K + ++ A + KQ Y+YN+L+ L V + E +
Sbjct: 460 TTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFET 519
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E VP + TY ++I G+ K GM+ +A V+ M K PN++ Y + I+G+CK +
Sbjct: 520 EGFVPTAM-TYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCD 578
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A K +N++ +G RP+ YN++IYG C G + A ++ M +G N+S + S +
Sbjct: 579 LALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G + ++A+ + +++ ++ D +Y +I+GF K G A+ L EM A+G
Sbjct: 639 TGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNI 698
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +F A+ L NG++D A LL +M ++D PN + YN +I G + G++Q+
Sbjct: 699 PDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGY-LRNGKLQEAFR 757
Query: 424 LVDRMIRSGHNLDFTMYSCLL 444
L D M+ D T Y L+
Sbjct: 758 LHDEMLERKIMPDDTTYDILV 778
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 174/375 (46%), Gaps = 16/375 (4%)
Query: 95 YTAITDVLLS----HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
+ ++ DVL+ + I LL K+S + L+ Y + V+ A+ F +
Sbjct: 250 FNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETL 309
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ +Y L+ + A E Q+ +++ + P + + +I+G +
Sbjct: 310 RDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM-RDHGLLPSTNEFNMVIKGLLNDKLW 368
Query: 211 ENAKKVFDVMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
++A +F M P+ YN +I+ C++ ++ EA +M G +P +TY++++
Sbjct: 369 KDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLL 428
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
C+NG +DEA L +M GF NV T+ +++KG FD+A L + + ++
Sbjct: 429 LCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVS 488
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
+ +Y +ING C +G+ E +LK G PT ++N++ ++ G + A +
Sbjct: 489 CNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAV 548
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS----GHNLDFTMYSCLL 444
+QM PN V+Y + I G C DL +M+ G D Y+ L+
Sbjct: 549 YQQMCAKGIPPNIVTYTSFIDGYCKTS-----CCDLALKMLNDVRCKGLRPDIAAYNSLI 603
Query: 445 KGYCEEGNVENVMQI 459
G+C+EGN+ + +Q+
Sbjct: 604 YGFCQEGNMSHALQV 618
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 5/279 (1%)
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKK 247
P D + ++R K GM ++A ++FD M ++P+ + I CK + A
Sbjct: 174 PLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALL 233
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ +M + G P + T+N+++ L GR++EA + ++ G K +V +++ G C
Sbjct: 234 VLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYC 293
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
+ + +A+ + + P +Y V+I G + G ++A L ++MR GL P+
Sbjct: 294 LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
FN V + L+ + A+ L K+M +P+ +YN +I LC + ++++ +L ++
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMAD-SGIPDAFTYNILIHWLCQRR-KIREALNLWEK 411
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M +G Y LL YC G ++ +++ EM K
Sbjct: 412 MNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGK 450
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 161/276 (58%), Gaps = 5/276 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N L+ L + + A++ +++ +VP D+ TY ++I G+C +G + +A+++F
Sbjct: 260 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVP-DLVTYNSLIEGFCMVGDLNSARELF 318
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P++++YN +ING+ K ++EEA K NEM+ G RPN +TY++++ G+ +
Sbjct: 319 VSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLA 378
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+VD+AK L + M+ +G +N T+ L GLC +A+ + +N ++++
Sbjct: 379 GKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENL 438
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G CK GK + A L +++ G +P V ++ + G++D+A +L+++M
Sbjct: 439 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEA 498
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
C P+ ++YNT++ G ++++V L+ RM +
Sbjct: 499 NGCTPDIITYNTLMRGF-YESNKLEEVVQLLHRMAQ 533
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 206/463 (44%), Gaps = 87/463 (18%)
Query: 70 HALFFFNWA--SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFIS 127
HAL FF+ S P P+ + ++H L+S A + S S +
Sbjct: 52 HALHFFHLMMRSTPTPSLSSFNH----------------LLSGLAKIKHYSQVFSLYNQM 95
Query: 128 KLIKAYGDRGNVKAAIFWFHQAKQIENGACLY-------------SYNSLLGVLVRVNSI 174
+L DR + + ++ G + +YN+L+ L + I
Sbjct: 96 RLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRI 155
Query: 175 KLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---------TVKPN 225
A F ++ K P DV TY T+I+G C G I A K+ M KPN
Sbjct: 156 SEATRLFLRMQKLGCTP-DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214
Query: 226 LLAYNTMINGFCKKGELEEAKKCM----------NEMMNRGCRPNELTYNAMIYGLCING 275
++ YN +++G CK G +EAK+ NEM+++G +P+ +T+N +I LC G
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG 274
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+V EAK L+ M +G ++ T+ S+++G C+VG + A ++ PDV SY
Sbjct: 275 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 334
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP-- 393
V+ING+ K K +EA+ L EM G +P V +++++ + + G++D A L M
Sbjct: 335 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 394
Query: 394 -----------------QMDCL------------PNF----VSYNTIICGLCMAKGRMQD 420
+ DCL NF + N +I GLC A G+++
Sbjct: 395 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKA-GKLET 453
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+L +++ GH + Y+ ++ G+C EG V+ + +M
Sbjct: 454 AWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 496
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 194/417 (46%), Gaps = 24/417 (5%)
Query: 73 FFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKA 132
F + ++ P+PNP C T +V +H+L +++++ S + L+
Sbjct: 22 LFTHSSAIPSPNPQIAFFLRHCKTG--NVTATHAL-HFFHLMMRSTPTPSLSSFNHLLSG 78
Query: 133 YGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPP 192
+ ++Q + + + N LL L VN ++ F I++ P
Sbjct: 79 LAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGY-SP 137
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
++ TY T+I+G C I A ++F M P+++ Y T+I G C G + A K
Sbjct: 138 NIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLH 197
Query: 250 NEMMNR------GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL----------NGFK 293
EM+N C+PN +TYN ++ GLC GR DEAK L +M+ G +
Sbjct: 198 QEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQ 257
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
++ T ++ LC GK +A L ++E+ + PD+ +Y +I GFC +G + A L
Sbjct: 258 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 317
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
M ++G +P V S+N + + +++ A+ L +M + PN ++Y++++ G+ +
Sbjct: 318 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFL 377
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
A G++ D + L M G + Y L G C+ + M++ E+ + +L
Sbjct: 378 A-GKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKL 433
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 36/284 (12%)
Query: 237 CKKGELE--EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
CK G + A + MM P+ ++N ++ GL + L +MRL+G
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+ T +L LC V + + ++ +P++ +Y +I G C + EA L
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP------QMDCLPNFVSYNTII 408
M+ G P V ++ + + L G ++ A+ L ++M +++C PN ++YN I+
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222
Query: 409 CGLCMAKGRMQDVEDLVDRM----------IRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
GLC GR + + L + M + G D ++ L+ C+EG
Sbjct: 223 DGLCKV-GREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG------- 274
Query: 459 IAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFV 502
++++ K L ++++ ++ +VT S I F V
Sbjct: 275 ----------KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMV 308
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 165/294 (56%), Gaps = 6/294 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+SY SL+ L + + A + Q ++E++V P++ TY+T+I G CK +I +A ++F
Sbjct: 161 FSYGSLINGLCKNGQTRDALQLL-QKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFS 219
Query: 219 VMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
++T + +++AYN++I+G C G+ EA + + M+ P++ T+N ++ LC G
Sbjct: 220 LVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEG 279
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R+ EA+ + A M G K ++ T+ ++++G C+ +A +++ + PDV +Y
Sbjct: 280 RIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYN 339
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
V+ING+CKI DEA+ L KE+R + L P + ++N++ L + G + L+ +M
Sbjct: 340 VLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDR 399
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
P+ V+YN + C +K + + + R I G DF MY +++ +C+
Sbjct: 400 GQSPDIVTYNIFLDAFCKSKPYEKAIS--LFRQIVQGIWPDFYMYDVIVENFCK 451
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 186/414 (44%), Gaps = 46/414 (11%)
Query: 89 HHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQ 148
H P + + D LLS + +L+ F KL+ A G+ AI F Q
Sbjct: 27 HLHPPKFHTVDDTLLSFN------RMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQ 80
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
+ + L+ + A I+K P++ T+ T+I G+C G
Sbjct: 81 LHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGF-QPNMVTFNTLINGFCING 139
Query: 209 MIENAKKV-FDVMTVKPNL--LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
M+ A D+M L +Y ++ING CK G+ +A + + +M RPN +TY+
Sbjct: 140 MVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYS 199
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+I GLC + + +A L + + G +V + S++ G C VG++ +A L ++
Sbjct: 200 TVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRG 259
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV------------- 372
N+NPD ++ ++++ CK G+ EA + M RG KP + ++NA+
Sbjct: 260 NINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEA 319
Query: 373 ---FRILVENG-------------------ELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
F +V+ G +D A++L K++ + +PN +YN++I G
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDG 379
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
LC GRM V++LVD M G + D Y+ L +C+ E + + ++V
Sbjct: 380 LC-KLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV 432
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 142/311 (45%), Gaps = 41/311 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ V + A +V+ N+ P D T+ ++ CK G I A+ VF V
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDY-TFNILVDALCKEGRIVEAQGVFAV 290
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M KP+++ YN ++ GFC + EA++ N M+ RG P+ L YN +I G C
Sbjct: 291 MMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDM 350
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK------------------------- 311
VDEA +L ++R N++T+ S++ GLC +G+
Sbjct: 351 VDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNI 410
Query: 312 ----------FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+++A+ R +++ + PD Y+V++ FCK K A L+ + G
Sbjct: 411 FLDAFCKSKPYEKAISLFRQIVQG-IWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHG 469
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P V ++ + L ++ D A+ LL +M DC P+ V++ TII G +
Sbjct: 470 CCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETII-GALQERNETDKA 528
Query: 422 EDLVDRMIRSG 432
E L MI G
Sbjct: 529 EKLRLEMIERG 539
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 38/278 (13%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
D+ + L+ A G + A F + + +YN+L+ N++ A E F
Sbjct: 264 DDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELF 323
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCK 238
+++VK + PDV Y +I GYCK+ M++ A +F + K PNL YN++I+G CK
Sbjct: 324 NRMVKRGL-EPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCK 382
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML--------------- 283
G + ++ ++EM +RG P+ +TYN + C + ++A L
Sbjct: 383 LGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMY 442
Query: 284 -------------------MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+ + ++G NV T+ M+ LC FD+A+ L + +
Sbjct: 443 DVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDD 502
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ PD ++E +I + ++D+A L EM RGL
Sbjct: 503 NDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 147/271 (54%), Gaps = 4/271 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
PD+ TY T+I G CK G + +A+++ + M +K PN++ Y +I+ FCK+G LEEA+
Sbjct: 12 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++EM +G N + YN +I LC + +V +A + M G K ++ T S++ GLC
Sbjct: 72 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
V KF++A+G ++++ + + +Y +I+ F + G EA+ L+ +M RG +
Sbjct: 132 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 191
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + + L G +++ + L + M PN +S N +I GLC G +Q + + M
Sbjct: 192 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT-GNIQHALEFLRDM 250
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
I G D Y+ L+ G C+ G + + +
Sbjct: 251 IHRGLTPDIVTYNSLINGLCKTGRAQEALNL 281
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 135/252 (53%), Gaps = 4/252 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
YN L+ L + ++ A F + + PD+ T+ ++I G CK+ E A ++
Sbjct: 86 GYNCLISALCKDEKVQDALNMFGDMSSKGC-KPDIFTFNSLIFGLCKVNKFEEALGLYQD 144
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ N + YNT+I+ F ++G ++EA K +N+M+ RGC +++TYN +I LC G
Sbjct: 145 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 204
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+++ L M G N + ++ GLC G A+ +LR+++ + PD+ +Y
Sbjct: 205 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 264
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING CK G++ EA++L +++ G+ P ++N + + G D A LLL +
Sbjct: 265 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 324
Query: 397 CLPNFVSYNTII 408
+PN V++ ++
Sbjct: 325 FIPNEVTWYILV 336
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 162/338 (47%), Gaps = 40/338 (11%)
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
G +++YN+L+ L + + A E +++ + P+V TYT +I +CK G +E A+
Sbjct: 11 GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGC-EPNVITYTILIDRFCKEGRLEEAR 69
Query: 215 KVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
V D M+ K N + YN +I+ CK ++++A +M ++GC+P+ T+N++I+GL
Sbjct: 70 NVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 129
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSML---------------------------- 303
C + +EA L M L G N T+ +++
Sbjct: 130 CKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 189
Query: 304 -------KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
K LC G ++ + ++M +NP+ S ++ING C+ G A+ L++
Sbjct: 190 ITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 249
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M RGL P + ++N++ L + G A+ L ++ P+ ++YNT+I C +G
Sbjct: 250 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHC-KEG 308
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
D L+ R + SG + + L+ + +EG+ E
Sbjct: 309 MFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 126/243 (51%), Gaps = 1/243 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P++ YNT+I G CKKG L A++ MNEM +GC PN +TY +I C GR++EA+ +
Sbjct: 12 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +M G N + ++ LC K A+ ++ PD+ ++ +I G CK
Sbjct: 72 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+ K +EA+ L ++M G+ ++N + + G + A+ L+ M C + ++
Sbjct: 132 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 191
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YN +I LC A G ++ L + M+ G N + + L+ G C GN+++ ++ +M
Sbjct: 192 YNGLIKALCRA-GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 250
Query: 464 VTK 466
+ +
Sbjct: 251 IHR 253
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 118/215 (54%), Gaps = 1/215 (0%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M++ GC P+ TYN +I GLC G + A+ LM +M++ G + NV T+ ++ C G+
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
++A L + + + Y +I+ CK K +A+++ +M ++G KP +F+FN+
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L + + + A+ L + M + N ++YNT+I + +G MQ+ LV+ M+
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF-LRRGAMQEALKLVNDMLFR 183
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G LD Y+ L+K C GN+E + + +M++K
Sbjct: 184 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 218
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+++ PD+ +Y +I G CK G A L+ EM+ +G +P V ++ + +
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
G L+ A +L +M N V YN +I LC + ++QD ++ M G D
Sbjct: 63 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE-KVQDALNMFGDMSSKGCKPDIFT 121
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMV 464
++ L+ G C+ E + + +M+
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDML 146
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
+ M + G P +F++N + L + G L A L+ +M C PN ++Y +I C
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC-K 61
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+GR+++ +++D M G L+ Y+CL+ C++ V++ + + +M +K
Sbjct: 62 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 113
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 223/458 (48%), Gaps = 25/458 (5%)
Query: 24 ITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNP 83
+ +++ L+ N +N+ ++ + S L S++ V+ + L FF+W S
Sbjct: 31 VKDILEVLHTHNQWEENLQTRFSE--SEVLASDVAHLVLDRIRDVELGLKFFDWVS---- 84
Query: 84 NPNKYHHTTP----CYTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGD 135
+ ++ P Y+++ +L + S +L+N + +S +I+AY D
Sbjct: 85 ---RGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSD 141
Query: 136 RGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK-ENVVPPD 193
G V+ A+ ++ K + + NSLL +LV++ I++A + + ++++ +
Sbjct: 142 SGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRC 201
Query: 194 VSTYTT--MIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
V Y+T M++G CK G +E +K+ + + PN++ YNT+I+G+CKKG++E A
Sbjct: 202 VDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGL 261
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
E+ +G P TY A+I G C G L+ +M G NV + +++
Sbjct: 262 FIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYK 321
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G +AV + ++E PD+ +Y +I+G C+ GK EA LL++ +GL P FS
Sbjct: 322 HGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFS 381
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ + + G DRA L +M + P+ V+Y ++ GL +A G + + ++M
Sbjct: 382 YTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVA-GEVDVALTIREKM 440
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ G D +Y+ L+ G C++ + + EM+ +
Sbjct: 441 LERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQ 478
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 152/311 (48%), Gaps = 5/311 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ R + A++ Q + + ++P S YT +I YCK G + A
Sbjct: 346 TYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFS-YTPLIHAYCKQGGYDRASNWLIE 404
Query: 220 MTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT KP+L+ Y +++G GE++ A +M+ RG P+ YN ++ GLC +
Sbjct: 405 MTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFK 464
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ AK+L+A+M + + +++ G G D+A +E MNP + Y
Sbjct: 465 LPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNA 524
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G+CK G +A++ + M+ R L P F+++ V V+ +LD A + ++M +M
Sbjct: 525 MIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMK 584
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C PN V+Y ++I G C KG + + M G + YS L+ +C+E + +
Sbjct: 585 CKPNVVTYTSLINGFC-RKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDA 643
Query: 457 MQIAHEMVTKK 467
EM+ K
Sbjct: 644 ASFFEEMLMNK 654
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 166/346 (47%), Gaps = 5/346 (1%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
F + LI Y +G+++ A F + K + +Y +++ + K + ++
Sbjct: 241 FYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEM 300
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
+ +V Y T+I K G I A + + M KP+++ YNT+I+G C+ G+
Sbjct: 301 NSRGLTV-NVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGK 359
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ EA + + + + +G PN+ +Y +I+ C G D A + +M G K ++ T+ +
Sbjct: 360 VSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGA 419
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GL V G+ D A+ ++E + PD Y ++++G CK K A LL EM +
Sbjct: 420 LVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQS 479
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P F + + + NG LD A L + + P V YN +I G C G M+D
Sbjct: 480 VLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKF-GMMKDA 538
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
++RM + D YS ++ GY ++ +++ ++ EMV K
Sbjct: 539 MACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMK 584
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 164/359 (45%), Gaps = 17/359 (4%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI AY +G A W + + + L +Y +L+ LV + +A +
Sbjct: 380 FSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREK 439
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKG 240
+++ V P D Y ++ G CK + AK + M +V P+ Y T+++GF + G
Sbjct: 440 MLERGVFP-DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNG 498
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
L+EA+K + +G P + YNAMI G C G + +A + +M+ + T+
Sbjct: 499 NLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYS 558
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G D A R +++ P+V +Y +INGFC+ G ++ + +EM+A
Sbjct: 559 TVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQAC 618
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
GL P V +++ + + +L A ++M C+PN V++N ++ G R
Sbjct: 619 GLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAIS 678
Query: 421 VE-------------DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + RMI G Y+ +L C+ G +Q++++M +K
Sbjct: 679 EKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSK 737
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 150/313 (47%), Gaps = 19/313 (6%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+ Y +L+ +R ++ A + F ++ E + P + Y MI+GYCK GM+++A +
Sbjct: 485 FVYATLVDGFIRNGNLDEARKLF-ELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACIN 543
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + P+ Y+T+I+G+ K+ +L+ A+K EM+ C+PN +TY ++I G C G
Sbjct: 544 RMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKG 603
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ + + +M+ G NV T+ ++ C K A + ++ P+ ++
Sbjct: 604 DLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFN 663
Query: 336 VVINGFCKIG--------------KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
++NGF K G K ++ M + G P ++N++ L + G
Sbjct: 664 YLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGM 723
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
A+ L +M C+P+ VS+ ++ G+C+ +GR ++ +++V + YS
Sbjct: 724 FRTALQLSNKMTSKGCIPDSVSFVALLHGVCL-EGRSKEWKNIVSCNLNERELQIAVNYS 782
Query: 442 CLLKGYCEEGNVE 454
+L Y +G E
Sbjct: 783 SILDQYLPQGTSE 795
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI + +G++ ++ F + + + +Y+ L+G + + A FF +++
Sbjct: 593 TSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLM 652
Query: 187 ENVVPPDVSTYTTMIRGYCKMG----------MIENAKKVFDVMTVK-------PNLLAY 229
VP DV T+ ++ G+ K G EN + +F + P AY
Sbjct: 653 NKCVPNDV-TFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAY 711
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
N+++ C+ G A + N+M ++GC P+ +++ A+++G+C+ GR E K +++
Sbjct: 712 NSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVS 767
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 170/342 (49%), Gaps = 6/342 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+++A+ +G + F + ++ + +Y++ + L +K A ++V +
Sbjct: 222 VVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKG 281
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF----DVMTVKPNLLAYNTMINGFCKKGELEE 244
+ P+V T+T++I G CK+G +E A ++F + KPN+ Y MI G+CK+G+L
Sbjct: 282 L-KPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLAR 340
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A+ + M+ +G PN TY +I+G C G D A LM KM+L GF N+ T+ +++
Sbjct: 341 AEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIG 400
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C GK +A LR ++ D +Y ++I CK G A+ L K+M + P
Sbjct: 401 GFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHP 460
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ ++ + + + +++++ L + + +P +Y ++I G C G++ +
Sbjct: 461 DIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRL-GKLTSALKV 519
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+RM++ G D Y L+ C+E +E + M+ K
Sbjct: 520 FERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDK 561
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 154/324 (47%), Gaps = 43/324 (13%)
Query: 185 VKENVVPPDVSTYTTMIR-GYCKMGMIENAKKVFDVMT-----VKPNLLAYNTMINGFCK 238
++ + +P V T ++R G G +A++ FD M V+P+ ++ ++ G C+
Sbjct: 134 LRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALVLGCCR 193
Query: 239 KGELEEAKKCMNEMMNRG---------------CR--------------------PNELT 263
+G EEA + M +G CR PN +
Sbjct: 194 EGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVN 253
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG-YLRNV 322
Y+A I GLC G V +A ++ +M G K NV TH S++ GLC +G ++A +L+ V
Sbjct: 254 YSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLV 313
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
++ P+V +Y V+I G+CK GK A LL M +GL P ++ + + G
Sbjct: 314 KSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSF 373
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
DRA L+ +M LPN +YN II G C KG++Q+ ++ G +LD Y+
Sbjct: 374 DRAFELMNKMKLEGFLPNIYTYNAIIGGFC-KKGKIQEAYKVLRMATSQGLHLDKVTYTI 432
Query: 443 LLKGYCEEGNVENVMQIAHEMVTK 466
L+ +C++G++ + + +M K
Sbjct: 433 LITEHCKQGHITCALDLFKQMAEK 456
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 122/246 (49%), Gaps = 12/246 (4%)
Query: 235 GFCKKGELEEAKKCMNEMMNR--GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
G G A++ + M G RP+ ++ A++ G C GR +EA L+A M GF
Sbjct: 153 GLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGF 212
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ +T +++ C G+F R + E P++ +Y I+G C+ G +A
Sbjct: 213 CLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFH 272
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAI-LLLKQMPQMDCLPNFVSYNTIICGL 411
+L+EM +GLKP V++ ++ L + G ++RA L LK + PN +Y +I G
Sbjct: 273 VLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGY 332
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLL 471
C +G++ E L+ RM+ G + Y+ L+ G+C+ G+ + ++ ++M
Sbjct: 333 C-KEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKM-------- 383
Query: 472 KLKNFL 477
KL+ FL
Sbjct: 384 KLEGFL 389
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 129/258 (50%), Gaps = 4/258 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y ++G + + AE ++V++ + P + +TYTT+I G+CK G + A ++
Sbjct: 322 VHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP-NTNTYTTLIHGHCKGGSFDRAFELM 380
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M ++ PN+ YN +I GFCKKG+++EA K + ++G +++TY +I C
Sbjct: 381 NKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQ 440
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + A L +M ++ T+ +++ C + +Q+ + + P ++Y
Sbjct: 441 GHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTY 500
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G+C++GK A+ + + M G P ++ A+ L + L+ A L + M
Sbjct: 501 TSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLD 560
Query: 395 MDCLPNFVSYNTIICGLC 412
+P V+ T+ C
Sbjct: 561 KHLVPCDVTRVTLAYEYC 578
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 122/254 (48%), Gaps = 7/254 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+YN+++G + I+ A + + + D TYT +I +CK G I A +F
Sbjct: 392 IYTYNAIIGGFCKKGKIQEAYKVLRMATSQGL-HLDKVTYTILITEHCKQGHITCALDLF 450
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P++ Y T+I +C++ ++E++++ ++ ++ G P + TY +MI G C
Sbjct: 451 KQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRL 510
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++ A + +M +G + T+ +++ LC + ++A +++ ++ P +
Sbjct: 511 GKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTR 570
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+ +C+ K A+S L + R T +A+ R L G LD A L LK +
Sbjct: 571 VTLAYEYCRRDKITIAVSFLDRLDKRQQAHTA---DALVRKLSTVGNLDAASLFLKNVLD 627
Query: 395 MDCLPNFVSYNTII 408
+ +Y + I
Sbjct: 628 KHYAVDHATYTSFI 641
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 160/312 (51%), Gaps = 8/312 (2%)
Query: 95 YTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y I D L L++ A + +K + L + LI + G K A ++ K
Sbjct: 234 YNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMK 293
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
L +++ L+ ++ + + A + + E V PDV+TY T++ GYC +
Sbjct: 294 GGNIMPDLVAFSVLIDIMCKEGEVSEARVIL-KTMTEMGVEPDVATYNTLMNGYCLRMEV 352
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A+KVF+VM K P++ +++ ++NG+CK ++EAK+ +EM +RG P+ ++YN +
Sbjct: 353 VEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTL 412
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC R EA+ L M NG+ N+ T+ +L L G DQA+G R + + +
Sbjct: 413 ISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGL 472
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD+ +Y ++I+G CK GK +A L E+ +GL+P + + + G LD A
Sbjct: 473 KPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHK 532
Query: 388 LLKQMPQMDCLP 399
+QM + DC P
Sbjct: 533 AFRQMEKDDCSP 544
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 172/356 (48%), Gaps = 43/356 (12%)
Query: 149 AKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+KQ+E + S L+ R+ + +I+K + P+V T++T+I G+C
Sbjct: 114 SKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGL-EPNVITFSTLINGFC 172
Query: 206 KMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
G I A ++FDVM KPN+ +Y+ +I G C+ G+ E K + M GC P+ +
Sbjct: 173 IEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVV 232
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
YN ++ LC + V+EA + KM+ G V T+ S++ GL +G++ +A G L +
Sbjct: 233 IYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM 292
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA----------- 371
N+ PD+ ++ V+I+ CK G+ EA +LK M G++P V ++N
Sbjct: 293 KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEV 352
Query: 372 -----VFRILVENGEL-------------------DRAILLLKQMPQMDCLPNFVSYNTI 407
VF +++ G + D A L +M +P+ VSYNT+
Sbjct: 353 VEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTL 412
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
I GLC A+ R + E+L M +G+ + YS LL ++G ++ M + M
Sbjct: 413 ISGLCQAR-RPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAM 467
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 170/336 (50%), Gaps = 10/336 (2%)
Query: 138 NVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
N+ A+ F+ + + L LVR+ K Q+ + DV +
Sbjct: 71 NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGI-SHDVLSL 129
Query: 198 TTMIRGYCKMGMIENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T +I +C++ ++ V + ++PN++ ++T+INGFC +G++ A + + M+
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
RG +PN +Y+ +I GLC G+ E L+ M++ G + +V + +++ LC ++
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
AV + + P V +Y +I+G +G+ EA LL EM+ + P + +F+ +
Sbjct: 250 AVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLID 309
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE--DLVDRMIRSG 432
I+ + GE+ A ++LK M +M P+ +YNT++ G C+ RM+ VE + + MI G
Sbjct: 310 IMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCL---RMEVVEARKVFEVMISKG 366
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
D +S L+ GYC+ ++ Q+ EM T +G
Sbjct: 367 RMPDVFSFSILVNGYCKAKRIDEAKQLFDEM-THRG 401
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 151/306 (49%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ L + + A F ++ K + P V TYT++I G +G + A + + M
Sbjct: 234 YNTIVDRLCKDRLVNEAVHIFCKM-KGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM 292
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+L+A++ +I+ CK+GE+ EA+ + M G P+ TYN ++ G C+ V
Sbjct: 293 KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEV 352
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA+ + M G +V + ++ G C + D+A + + PD SY +
Sbjct: 353 VEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTL 412
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G C+ + EA L K+M + G P + +++ + L + G LD+A+ L + M
Sbjct: 413 ISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGL 472
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ V+YN +I G+C G+ +D +L + G + + + + G C+ G ++
Sbjct: 473 KPDLVTYNIMIDGMC-KYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAH 531
Query: 458 QIAHEM 463
+ +M
Sbjct: 532 KAFRQM 537
>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
Length = 445
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 174/378 (46%), Gaps = 50/378 (13%)
Query: 175 KLAEEFFHQIVKENVVPPD--VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTM 232
+L EEF K+ + P V + M++G+ + G ++ AK M KPN ++YNT+
Sbjct: 35 RLVEEF-----KDTGMSPGSLVVLHNLMLKGFSEAGFVDEAKSHLHRMDCKPNSVSYNTL 89
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
I+ C G ++EA++ + M RG PN +TYNAM GL G +DEA LM M GF
Sbjct: 90 IDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFELMGVMESAGF 149
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
T +++ LC G+ D+A + ++ N+ P++ + ++++ FCK + +EA+
Sbjct: 150 ALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNLILHAFCKAARPEEALG 209
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY-------- 404
+ M G PT+ +FNA+ + ++D A LL+ M C PNFV+Y
Sbjct: 210 MTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKPNFVTYSIMVQKFA 269
Query: 405 ----------------------NTIIC-----GLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
N ++C GLC G M + M G +
Sbjct: 270 EMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLC-KTGEMDLASRFLTVMAEEGCRANT 328
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWIS 497
Y+ L++G+C+ G ++ ++ EM+ +G L + ++L+ + + G
Sbjct: 329 ATYNSLVEGFCKLGRMDEAERVLEEMIA-EGSLPDSTTY------SVLIQGLCSAGQIEH 381
Query: 498 RFVFVHQVVVIMERTVED 515
F+ + QV +E D
Sbjct: 382 AFMVMLQVTRAVESARPD 399
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 156/334 (46%), Gaps = 8/334 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++K + + G V A H+ N SYN+L+ L I+ A E + K
Sbjct: 57 MLKGFSEAGFVDEAKSHLHRMDCKPNSV---SYNTLIDALCSSGRIQEAREELQAMAKRG 113
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLA---YNTMINGFCKKGELEEA 245
V P V TY M G K G+++ A ++ VM L +N ++ CK G +EA
Sbjct: 114 VAPNRV-TYNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEA 172
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K M M+ R PN LT N +++ C R +EA + M GF + T ++L+
Sbjct: 173 CKVMETMLLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLEL 232
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C + D A L + + P+ +Y +++ F ++G+ EA + L+++ G P
Sbjct: 233 FCNTDQMDSAAKLLETMAHSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPN 292
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ NA L + GE+D A L M + C N +YN+++ G C GRM + E ++
Sbjct: 293 LLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFC-KLGRMDEAERVL 351
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ MI G D T YS L++G C G +E+ +
Sbjct: 352 EEMIAEGSLPDSTTYSVLIQGLCSAGQIEHAFMV 385
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 125/244 (51%), Gaps = 6/244 (2%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+ P++ T ++ +CK E A + D+M P ++ +N ++ FC +++ A
Sbjct: 184 IEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAA 243
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
K + M + C+PN +TY+ M+ GR+ EA+ + ++ + G+ N+ + + GL
Sbjct: 244 KLLETMAHSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGL 303
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+ D A +L + E + +Y ++ GFCK+G+ DEA +L+EM A G P
Sbjct: 304 CKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDS 363
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQM--DCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+++ + + L G+++ A +++ Q+ + P+ ++ +I LC G M +
Sbjct: 364 TTYSVLIQGLCSAGQIEHAFMVMLQVTRAVESARPDPATFVKLIEKLC-ELGEMDRAALV 422
Query: 425 VDRM 428
++RM
Sbjct: 423 LERM 426
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 42/282 (14%)
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMR----------------LNGF----------- 292
+E TY +++G C+ G DEAK L+ + + L GF
Sbjct: 13 SEFTYGTLVHGHCLAGEFDEAKRLVEEFKDTGMSPGSLVVLHNLMLKGFSEAGFVDEAKS 72
Query: 293 -------KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
K N ++ +++ LC G+ +A L+ + + + P+ +Y + G K G
Sbjct: 73 HLHRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAG 132
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
DEA L+ M + G T +FN V L ++G D A +++ M + PN ++ N
Sbjct: 133 LLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLN 192
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
I+ C A R ++ + D M+ G ++ LL+ +C +++ ++ M
Sbjct: 193 LILHAFCKA-ARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMAH 251
Query: 466 KKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVV 507
K + NF+T ++++ G + F+ Q+VV
Sbjct: 252 SKCK----PNFVTY---SIMVQKFAEMGRMVEARAFLEQLVV 286
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 6/180 (3%)
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD--VKSYEVVINGFCKIGK 346
L F + T+ +++ G C+ G+FD+A + + M+P V + +++ GF + G
Sbjct: 7 LGEFVHSEFTYGTLVHGHCLAGEFDEAKRLVEEFKDTGMSPGSLVVLHNLMLKGFSEAGF 66
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
DEA S L M KP S+N + L +G + A L+ M + PN V+YN
Sbjct: 67 VDEAKSHLHRMDC---KPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNA 123
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ GL A G + + +L+ M +G L ++ +++ C+ G + ++ M+ +
Sbjct: 124 MATGLGKA-GLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLR 182
>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
Length = 506
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 162/310 (52%), Gaps = 7/310 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENG---ACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LIK Y +G++ A F + +++ L +Y++L+G L R +K A E F ++
Sbjct: 198 LIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFEDMI 257
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGEL 242
+++ + PD TY +I G+C++G +E A+ +F M +PN Y T+ING CKKGE+
Sbjct: 258 EKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEV 317
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E A+ EM+ G +P+ ++Y +++ LC +G VDE L+ +M G K +V T+ +
Sbjct: 318 EAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLL 377
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
L+GLC + +AV L + + +V SY +V+N C G+ ++A LL M RG
Sbjct: 378 LEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGF 437
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P + N + L + G + A + L + +P + +I + + + +E
Sbjct: 438 VPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIESVFRERKLRRSIE 497
Query: 423 DLVDRMIRSG 432
L+D +I G
Sbjct: 498 -LLDVLIAEG 506
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 146/280 (52%), Gaps = 8/280 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM------TVKPNLLAYNTMINGFCKKGELEEA 245
P+ Y +I+ Y K G + A +VFD M V+P+L+ Y+T+I G C+ +++EA
Sbjct: 190 PNTCIYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEA 249
Query: 246 KKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ +M+ + P++LTYN +I G C G+V++A+ + MR N + N + +++
Sbjct: 250 FELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLIN 309
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C G+ + A G ++ + + PD SY ++ C+ G DE I+L++EM +G K
Sbjct: 310 GHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKA 369
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
V ++N + L ++ + A+ LL+++P N SY ++ LC + G M+ L
Sbjct: 370 DVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLC-SCGEMEKAAGL 428
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ M+ G + + LL G C+ G V + + +V
Sbjct: 429 LGMMLGRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLV 468
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 161/312 (51%), Gaps = 7/312 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
YN L+ V+ + A + F ++ K N V P + TY+T+I G C+ ++ A ++F+
Sbjct: 195 YNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFE 254
Query: 219 VMTVK----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P+ L YN +I GFC+ G++E+A+ M C PN Y +I G C
Sbjct: 255 DMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKK 314
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G V+ A+ + +M +G + + ++ S++ LC G D+ + ++ + + DV +Y
Sbjct: 315 GEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTY 374
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++ G CK + EA++LL+++ + G++ V S+ V L GE+++A LL M
Sbjct: 375 NLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLG 434
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+P++ + N ++ GLC GR+ D + ++ +G + ++ L++ E +
Sbjct: 435 RGFVPHYAASNMLLIGLCDV-GRVSDATVTLYGLVDTGFMPEARCWARLIESVFRERKLR 493
Query: 455 NVMQIAHEMVTK 466
+++ ++ +
Sbjct: 494 RSIELLDVLIAE 505
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 125/248 (50%), Gaps = 5/248 (2%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC---RPNELTYNAMIYGLCINGRVDE 279
+PN YN +I + KKG+L A + +EM C RP+ +TY+ +I GLC ++ E
Sbjct: 189 QPNTCIYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKE 248
Query: 280 AKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
A L M + + T+ ++ G C +G+ ++A + + P+ +Y +I
Sbjct: 249 AFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLI 308
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG CK G+ + A + +EM G++P S+ ++ L +G +D I L+++M Q C
Sbjct: 309 NGHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCK 368
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
+ V+YN ++ GLC + R+ + L++++ G L+ Y ++ C G +E
Sbjct: 369 ADVVTYNLLLEGLCKDR-RIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAG 427
Query: 459 IAHEMVTK 466
+ M+ +
Sbjct: 428 LLGMMLGR 435
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 189/401 (47%), Gaps = 49/401 (12%)
Query: 114 LLKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+ S L D F S + + + G + AA+ +A Q Y+YN+LL +L+
Sbjct: 137 MTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARG 196
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT----------- 221
+ A F +++ + PD ++ +I+G C++G + A ++ + MT
Sbjct: 197 RAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITH 256
Query: 222 ----------------------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
PN++ Y ++I+G+CK G +E+A N+M+
Sbjct: 257 NILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDML 316
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G RPN +TYN +I G ++ A + ++ L +V T S++ G C G+ D
Sbjct: 317 ESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLD 376
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG-LKPTVFSFNAV 372
A+ + + + ++ P+V ++ ++I+ CK +S EA+ L+E+ R + P F +N V
Sbjct: 377 DAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPV 436
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
IL + G+++ A L++ M + C P+ +Y +I G CM KGR+ + L +M+ +G
Sbjct: 437 IDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCM-KGRIPEAITLFHKMVETG 495
Query: 433 HNLDF----TMYSCLLKGYCEEGNVENVMQIA--HEMVTKK 467
D + SC+LK V+ +M IA H ++K
Sbjct: 496 CRPDKITVNSFISCVLKAGMPN-EVDQIMLIASGHASASQK 535
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 131/252 (51%), Gaps = 6/252 (2%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN-GRVD 278
++V P+ +Y+ +I C+ G +A K ++M ++ + + + + G C N G +D
Sbjct: 105 LSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLD 164
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM-NPDVKSYEVV 337
A L+ K G + + ++L L G+ AV + ++ + +PD S+ VV
Sbjct: 165 AAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVV 224
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD- 396
I G C++G +A+ L++ M G P + N + L +++R LL+++ Q D
Sbjct: 225 IKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRL-QRDG 283
Query: 397 -CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C+PN V+Y ++I G C A GRM+D + + M+ SG + Y+ L+ GY + ++E+
Sbjct: 284 VCMPNVVTYTSVISGYCKA-GRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMES 342
Query: 456 VMQIAHEMVTKK 467
+++ +++ ++
Sbjct: 343 AVRMYRQLILRR 354
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 135/284 (47%), Gaps = 15/284 (5%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCK-KGELEEA 245
VPP +Y+ +I C+ G +A K+FD MT + L + + + G C G L+ A
Sbjct: 107 VPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAA 166
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLK 304
+ + G R YN ++ L GR +A L +G + + + ++K
Sbjct: 167 VTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIK 226
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL-K 363
G+C VG F +A+ + + E +PD ++ ++++G C+ + + LL+ ++ G+
Sbjct: 227 GVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCM 286
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++ +V + G ++ A+ + M + PN V+YN +I G G+ D+E
Sbjct: 287 PNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGY----GKALDMES 342
Query: 424 LVDRMIRS----GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
V RM R D +S L+ GYC G +++ M+I EM
Sbjct: 343 AV-RMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEM 385
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 224/468 (47%), Gaps = 48/468 (10%)
Query: 32 NPQ-----NPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPN 86
NPQ NP + +QP +F L + +++ + P AL FF W PN
Sbjct: 33 NPQIDNSVNPHFHSAVTQP--EFLLRVLNSV-------KHRPLTALRFFRWVEK---QPN 80
Query: 87 KYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLS-DFFISKLIKAYGDRGNVKAAIFW 145
+H + + AI D+L + + A +++ + ++ D + ++ G N + ++
Sbjct: 81 -FHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVGIGCGRNSEVSV-- 137
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE----FFHQIVKENVVPPDVSTYTTMI 201
LL +L++V + KL E F+++V ++P DV ++
Sbjct: 138 -----------------KLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLP-DVRNCNRVL 179
Query: 202 RGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
+ M+ ++V+ VM ++P ++ +NTM++ CK+GE+ A + ++ M GC
Sbjct: 180 KLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCD 239
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
PN+++YN ++ GL G D AK L+ +M + G K + T+ +++G C F++A
Sbjct: 240 PNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDL 299
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
R ++ P V +Y ++ C++G+ +A L M L P + S+N +
Sbjct: 300 RREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSR 359
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
G A+LL ++ + +P+ V+YNT+I G C G + + + D MI+ G D
Sbjct: 360 LGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRT-GNLDIAKGMKDDMIKHGLCPDVV 418
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLL 486
++ L++G+C+ GN+ ++ EM++ +G + TR+V L L
Sbjct: 419 TFTILVRGFCQMGNLPMAKELFDEMLS-RGLKPDCIAYTTRIVGELKL 465
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 170/337 (50%), Gaps = 11/337 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y GN A+ F + + + +YN+L+ R ++ +A+ ++K
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P DV T+T ++RG+C+MG + AK++FD M +KP+ +AY T I G K G +A
Sbjct: 413 LCP-DVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKA 471
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
EM G P+ +TYN +I GLC G D+A L+ KMRL G + T+ S++
Sbjct: 472 FGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHA 531
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+ G +A ++++ ++P V +Y V+I+ + G+ D A EM+ +G+ P
Sbjct: 532 HLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPN 591
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII---CGLCMAKGRMQDVE 422
V ++NA+ L + +D A L +M PN +Y +I L + ++ +
Sbjct: 592 VITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYK 651
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
D++DR I+ D +S L+K ++ + V+++
Sbjct: 652 DMLDREIKP----DSCTHSALMKHLSKDYKLLAVLRL 684
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 161/310 (51%), Gaps = 9/310 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ L R+ + A + +V E+++P D+ +Y T+I GY ++G A +F
Sbjct: 314 TYNTIMYSLCRLGRVSDARRYLDVMVNEDLMP-DLVSYNTLIYGYSRLGNFAEALLLFSE 372
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ K P+++ YNT+I+G C+ G L+ AK ++M+ G P+ +T+ ++ G C G
Sbjct: 373 LRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGN 432
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ AK L +M G K + + + + G +G +A G + PD+ +Y V
Sbjct: 433 LPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNV 492
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING CK+G D+A L+++MR G+ P ++ ++ + +G L +A + M +
Sbjct: 493 LINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKG 552
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+Y +I + +GR+ + D M G + + Y+ L+ G C+ EN+
Sbjct: 553 IHPSVVTYTVLIHSYAV-RGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCK----ENM 607
Query: 457 MQIAHEMVTK 466
M +A+ + +
Sbjct: 608 MDVAYNLFAE 617
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 159/309 (51%), Gaps = 5/309 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS+L K A F ++ + + V PDV TY +++ CK G A+K+FD
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKM-RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDS 326
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT ++P++ Y T++ G+ KG L E ++ M+ G P+ +N +I +
Sbjct: 327 MTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEK 386
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA ++ +KMR +G NV T+ +++ LC G D A+ Y +++ + P++ Y
Sbjct: 387 VDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 446
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ C K D+A L+ EM RG+ FN++ + G + + L M ++
Sbjct: 447 LIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN ++Y+T+I G C+A G+M + L+ M G D Y+ L+ GYC +++
Sbjct: 507 VKPNVITYSTLIDGYCLA-GKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565
Query: 457 MQIAHEMVT 465
+ + EMV+
Sbjct: 566 LALFKEMVS 574
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 177/382 (46%), Gaps = 41/382 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + L+K D + A+ H G + SY +++ + A
Sbjct: 159 FSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+H+++ + PDV TY+++I CK ++ A +V M V PN + YN++++G+C
Sbjct: 219 YHEMLDRRI-SPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC 277
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+ +EA + +M + G P+ +TYN+++ LC NGR EA+ + M G + +++
Sbjct: 278 SSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIA 337
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++L+G G + L ++ ++PD + ++I + K K DEA+ + +M
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM---- 413
R GL P V ++ AV IL ++G +D A+L +QM PN + Y ++I LC+
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKW 457
Query: 414 ------------------------------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+GR+ + E L D M+R G + YS L
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517
Query: 444 LKGYCEEGNVENVMQIAHEMVT 465
+ GYC G ++ ++ M +
Sbjct: 518 IDGYCLAGKMDEATKLLSSMFS 539
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 159/338 (47%), Gaps = 40/338 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ L + A + F + K + PD++TY T+++GY G + + D+
Sbjct: 303 TYNSLMDYLCKNGRSTEARKIFDSMTKRGL-EPDIATYCTLLQGYATKGALVEMHALLDL 361
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+ +N +I + K+ +++EA ++M G PN +TY A+I LC +G
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM--------- 327
VD+A + +M G N+ + S++ LC+ K+D+A + +++ +
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481
Query: 328 --------------------------NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
P+V +Y +I+G+C GK DEA LL M + G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+KP ++N + +D A+ L K+M PN ++YN I+ GL + R
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTR-RTAAA 600
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
++L + +SG L+ + Y+ +L G C+ + +++
Sbjct: 601 KELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRM 638
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 137/257 (53%), Gaps = 11/257 (4%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
++++ + P+V TY +I CK G +++A F+ M + PN++ Y ++I+ C +
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++A++ + EM++RG N + +N++I+ C GRV E++ L M G K NV T+ +
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C+ GK D+A L ++ M PD +Y +ING+C++ + D+A++L KEM + G
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P + ++N + + L A L + + +YN I+ GLC
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK-------- 628
Query: 422 EDLVDRMIRSGHNLDFT 438
+L D +R NL T
Sbjct: 629 NNLTDEALRMFQNLCLT 645
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 167/326 (51%), Gaps = 5/326 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY + V A+ F + +Q + +Y +++G+L + S+ A +F Q++ E
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEA 245
+ P ++ YT++I C + A+++ M + N + +N++I+ CK+G + E+
Sbjct: 437 LTP-NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+K + M+ G +PN +TY+ +I G C+ G++DEA L++ M G K + T+ +++ G
Sbjct: 496 EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLING 555
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C V + D A+ + ++ + ++P++ +Y +++ G ++ A L + G +
Sbjct: 556 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLE 615
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ ++N + L +N D A+ + + + D ++N +I G + GR + +DL
Sbjct: 616 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI-GALLKVGRNDEAKDLF 674
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ +G D YS + + E+G
Sbjct: 675 AALSANGLVPDVRTYSLMAENLIEQG 700
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 142/264 (53%), Gaps = 6/264 (2%)
Query: 150 KQIENGACLYS--YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ ++ G CL + +NS++ + + +E+ F +V+ V P+V TY+T+I GYC
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGV-KPNVITYSTLIDGYCLA 524
Query: 208 GMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G ++ A K+ M +KP+ + YNT+ING+C+ +++A EM++ G PN +TY
Sbjct: 525 GKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 584
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N ++ GL R AK L + +G + +ST+ +L GLC D+A+ +N+
Sbjct: 585 NIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 644
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
++ + +++ ++I K+G++DEA L + A GL P V +++ + L+E G L+
Sbjct: 645 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 704
Query: 385 AILLLKQMPQMDCLPNFVSYNTII 408
L M + C N N+I+
Sbjct: 705 LDDLFLSMEENGCTANSRMLNSIV 728
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 145/282 (51%), Gaps = 9/282 (3%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT------VKPNLLAYNTMINGFCKKGELEEA 245
PDV + T +++G C + A ++ +M P++++Y T+INGF K+G+ ++A
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+EM++R P+ +TY+++I LC +D+A ++ M NG N T+ S+L G
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C + +A+G+L+ + + PDV +Y +++ CK G+S EA + M RGL+P
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ ++ + + G L LL M + P+ +N +IC AK D LV
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY--AKQEKVDEAMLV 393
Query: 426 -DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+M + G N + Y ++ C+ G+V++ M +M+ +
Sbjct: 394 FSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 5/194 (2%)
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG- 317
P TY +I C GR+D + + GF+ T +LKGLC + A+
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM---RARGLKPTVFSFNAVFR 374
LR + E + PDV S +++ G C +S EA+ LL M R G P V S+ V
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+ G+ D+A +M P+ V+Y++II LC + M +++ M+++G
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQA-MDKAMEVLTTMVKNGVM 263
Query: 435 LDFTMYSCLLKGYC 448
+ Y+ +L GYC
Sbjct: 264 PNCMTYNSILHGYC 277
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P V +Y ++I C+ G+ D + L + +G + +F + + L +
Sbjct: 81 GKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSD 140
Query: 385 AI-LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR---SGHNLDFTMY 440
A+ ++L++M ++ C+P+ S ++ GLC + R Q+ +L+ M G D Y
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLC-DENRSQEALELLHMMADDRGGGSAPDVVSY 199
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ ++ G+ +EG+ + HEM+ ++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRR 226
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 4/208 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y + A+ F + + +YN +L L A+E + I K
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
++STY ++ G CK + + A ++F + ++ +N MI K G +EA
Sbjct: 612 T-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 670
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + G P+ TY+ M L G ++E L M NG N S+++
Sbjct: 671 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 730
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKS 333
L G +A YL + E + + + +
Sbjct: 731 LLQRGDITRAGTYLSMIDEKHFSLEAST 758
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 187/389 (48%), Gaps = 60/389 (15%)
Query: 156 ACLYSYNSLLGVLVRVNSIK-------LAEEFFHQIVKENV--VPPDVSTYTTMIRGYCK 206
A + ++N LL + RV+ + L F+++++E V PD TY+ +I +C+
Sbjct: 47 ASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCR 106
Query: 207 MGMIE-----------------------------NAKKVFDVMTV----------KPNLL 227
MG +E +AK++ + M + P+++
Sbjct: 107 MGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVV 166
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMN---RGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+YNT++ GFC + EEA + ++ M + R C PN ++Y +I G G+VD+A L
Sbjct: 167 SYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLF 226
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M G + NV T+ +++ GLC D+A G + +++ + PD +Y +I+G+ I
Sbjct: 227 LEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSI 286
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
GK E + +L+EM A GLKP +++ ++ L NG A L M + PN Y
Sbjct: 287 GKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIY 346
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM- 463
+I G KG + ++ DL++ M+ +G + D +++ + Y ++ ++ M I ++M
Sbjct: 347 GILIHGYA-TKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMK 405
Query: 464 -------VTKKGRLLKLKNFLTRVVDALL 485
V G L+ L RV DA+L
Sbjct: 406 QQGLSPDVVNYGALIDALCKLGRVDDAVL 434
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 171/328 (52%), Gaps = 5/328 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A G V A+ F+Q ++ +NSL+ L V+ + A+EF+ +++ +
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ PDV + T++ C G + A+++ D+M +P +++Y T+I G C G ++EA
Sbjct: 479 I-RPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEA 537
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K ++ M++ G +P+E TYN +++G C GR+D+A + +M NG V T+ ++L G
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L +F +A N++ + ++ Y +++NG K DEA L + + ++ +
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +FN + L ++G + A+ L + +P+ +Y I L + +G +++ +DL
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENL-IEEGYLEEFDDLF 716
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
M +SG + M + L++ G++
Sbjct: 717 SAMEKSGTTPNSRMLNALVRRLLHRGDI 744
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 147/308 (47%), Gaps = 5/308 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ + + K ++ + PD TY +++ C G A+ +FD
Sbjct: 275 TYNCLIHGYLSIGKWKEVVRMLEEMSAHGL-KPDCYTYGSLLNYLCNNGRCREARFLFDS 333
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KPN+ Y +I+G+ KG L E +N M+ G P+ +N +
Sbjct: 334 MIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAM 393
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEA + KM+ G +V + +++ LC +G+ D AV +M + P++ +
Sbjct: 394 IDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNS 453
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ G C + K ++A EM +G++P V FN + L G++ +A L+ M ++
Sbjct: 454 LVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVG 513
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P +SY T+I G C+ GR+ + +D M+ G D Y+ LL GYC G +++
Sbjct: 514 TRPGVISYTTLIGGHCLV-GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDA 572
Query: 457 MQIAHEMV 464
+ EM+
Sbjct: 573 YGVFREML 580
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 159/331 (48%), Gaps = 8/331 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
L+K + + + A+ H + +C + SY ++ + A F +++
Sbjct: 171 LLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMM 230
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ P+V TYTT+I G CK +++ A+ VF M VKP+ YN +I+G+ G+
Sbjct: 231 DRGI-QPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW 289
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+E + + EM G +P+ TY +++ LC NGR EA+ L M G K NV+ + +
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGIL 349
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G G + L ++E ++PD + ++ + K DEA+ + +M+ +GL
Sbjct: 350 IHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGL 409
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P V ++ A+ L + G +D A+L QM PN +N+++ GLC + + +
Sbjct: 410 SPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVD-KWEKAK 468
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ M+ G D ++ +L C +G V
Sbjct: 469 EFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 156/314 (49%), Gaps = 7/314 (2%)
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVK---ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ G+L+ + K A H ++ EN + PD + + Y K MI+ A +F+
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+++ Y +I+ CK G +++A N+MMN G PN +N+++YGLC +
Sbjct: 404 MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++AK +M G + +V ++L LC G+ +A + + P V SY
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTT 523
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G C +G+ DEA L M + GLKP +++N + G +D A + ++M +
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P V+Y+TI+ GL + R + ++L MI SG + +Y+ +L G + V+
Sbjct: 584 ITPGVVTYSTILHGLFTTR-RFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEA 642
Query: 457 MQIAHEMVTKKGRL 470
++ + +K +L
Sbjct: 643 FKLFQSLCSKDFQL 656
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 159/329 (48%), Gaps = 5/329 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+ AY + + A+ F++ KQ + +Y +L+ L ++ + A F+Q++ E
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEG 443
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
V P ++ + +++ G C + E AK+ + M ++P+++ +NT++ C KG++ +A
Sbjct: 444 VAP-NIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKA 502
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ ++ M G RP ++Y +I G C+ GR+DEA + M G K + T+ ++L G
Sbjct: 503 QRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHG 562
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G+ D A G R ++ + P V +Y +++G + EA L M G +
Sbjct: 563 YCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWN 622
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++ +N + L +N +D A L + + D ++N +I G GR +D L
Sbjct: 623 IWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMI-GALFKSGRNEDAMHLF 681
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ G D Y + + EEG +E
Sbjct: 682 ATISSYGLVPDVFTYCLIAENLIEEGYLE 710
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 113/280 (40%), Gaps = 15/280 (5%)
Query: 91 TTPCYTAITDVLLSHSLIS----IAASL---LKNSNKLSDFFISKLIKAYGDRGNVKAAI 143
T P + T ++ H L+ A SL L K ++ + L+ Y G + A
Sbjct: 514 TRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY 573
Query: 144 FWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
F + + NG + +Y+++L L A+E + ++ ++ Y ++
Sbjct: 574 GVFRE--MLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK-QWNIWIYNIIL 630
Query: 202 RGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
G K ++ A K+F + K + +N MI K G E+A + + G
Sbjct: 631 NGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLV 690
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P+ TY + L G ++E L + M +G N ++++ L G +A Y
Sbjct: 691 PDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAY 750
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
L + E N + + + ++I+ + A SL ++ R
Sbjct: 751 LCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYR 790
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 173/330 (52%), Gaps = 6/330 (1%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
AI F + + L ++ + R L +F Q+ + N + ++ T MI
Sbjct: 72 AIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQL-ELNGIAHNIYTLNIMI 130
Query: 202 RGYCKMGMIENAKKVF-DVMTV--KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
+C+ A V VM + +P+ +NT+ING C +G++ +A ++ M+ GC+
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQ 190
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P+ +TYN+++ G+C +G A ++ KM K +V T+ +++ LC G D A+
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+ + + V +Y ++ G CK GK ++ LLK+M +R + P V +FN + + V+
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
G+L A L K+M PN ++YNT++ G CM + R+ + +++D M+R+ + D
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCM-QNRLSEANNMLDLMVRNKCSPDIV 369
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
++ L+KGYC V++ M++ ++K+G
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRN-ISKRG 398
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 172/330 (52%), Gaps = 5/330 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G+ A + ++ A +++Y++++ L R I A F ++ + + V T
Sbjct: 207 GDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI-KSSVVT 265
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y +++RG CK G + + M + PN++ +N +++ F K+G+L+EA + EM+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG PN +TYN ++ G C+ R+ EA ++ M N ++ T S++KG C+V + D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ RN+ + + + +Y +++ GFC+ GK A L +EM + G+ P V ++ +
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L +NG+L++A+ + + + + V Y TII G+C G+++D +L + G
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG-GKVEDAWNLFCSLPCKGV 504
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ Y+ ++ G C++G++ + +M
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 168/358 (46%), Gaps = 41/358 (11%)
Query: 150 KQIE-NGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
KQ+E NG +Y+ N ++ R A +++K PD +T+ T+I G C
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTLINGLCL 170
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G + A + D M +P+++ YN+++NG C+ G+ A + +M R + + T
Sbjct: 171 EGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFT 230
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y+ +I LC +G +D A L +M G K +V T+ S+++GLC GK++ L++++
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ P+V ++ V+++ F K GK EA L KEM RG+ P + ++N + L
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAK---------------------------- 415
A +L M + C P+ V++ ++I G CM K
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 416 ------GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G+++ E+L M+ G D Y LL G C+ G +E ++I ++ K
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 166/349 (47%), Gaps = 9/349 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ I D L I A SL K K S + L++ G
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
E + ++N LL V V+ ++ A E + +++ + P++ TY T++ GYC +
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI-SPNIITYNTLMDGYCMQNRL 349
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A + D+M P+++ + ++I G+C +++ K + RG N +TY+ +
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ G C +G++ A+ L +M +G +V T+ +L GLC GK ++A+ ++ ++ M
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ + Y +I G CK GK ++A +L + +G+KP V ++ + L + G L A +
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
LL++M + PN +YNT+I + G + L++ M G + D
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAH-LRDGDLTASAKLIEEMKSCGFSAD 577
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 185/376 (49%), Gaps = 9/376 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y +I + + S+A +L+ N +D F S +I + G + AAI F + +
Sbjct: 196 YNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +YNSL+ L + +V +V P+V T+ ++ + K G +
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV-PNVITFNVLLDVFVKEGKL 314
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A +++ M + PN++ YNT+++G+C + L EA ++ M+ C P+ +T+ ++
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C+ RVD+ + + G N T+ +++G C GK A + ++ +
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PDV +Y ++++G C GK ++A+ + ++++ + + + + + + G+++ A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L +P PN ++Y +I GLC KG + + L+ +M G+ + Y+ L++ +
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLC-KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 448 CEEGNVENVMQIAHEM 463
+G++ ++ EM
Sbjct: 554 LRDGDLTASAKLIEEM 569
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 117/233 (50%), Gaps = 5/233 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++ SL+ V + + F I K +V V TY+ +++G+C+ G I+ A+++F
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV-TYSILVQGFCQSGKIKLAEELF 426
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V P+++ Y +++G C G+LE+A + ++ + Y +I G+C
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+V++A L + G K NV T+ M+ GLC G +A LR + E P+ +Y
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L++EM++ G S V +L+ +GELD++ L
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDKSFL 598
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
NV + + G+ + K D A+ + ++ + P + + + + + + +
Sbjct: 53 NVCFRERLRSGIVDIKK-DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFC 111
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
K++ G+ +++ N + + A +L ++ ++ P+ ++NT+I GLC+
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCL- 170
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+G++ LVDRM+ +G D Y+ ++ G C G+ +A +M+ K
Sbjct: 171 EGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDT----SLAFDMLRK 218
>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 798
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y++++ L R ++ A F + + + P V ++ +++ GYCK+G ++ AK F
Sbjct: 188 HTYSTVVDGLCRQQKLEDAVLFL-RTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 246
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ + P++ ++N +ING C G + EA + ++M G P+ +TYN + G + G
Sbjct: 247 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 306
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD-VKSY 334
+ A ++ M G +V T+ +L G C +G D + L++++ + +
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+++G CK G+ DEA+SL +M+A GL P + +++ V L + G+ D A+ L +M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
LPN ++ ++ GLC KG + + L+D +I SG LD +Y+ ++ GY + G +E
Sbjct: 427 KRILPNSRTHGALLLGLC-QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 455 NVMQI 459
+++
Sbjct: 486 EALEL 490
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 136/282 (48%), Gaps = 5/282 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP----NLLAYNTMINGFCKKGELEEA 245
+ PDV TYT ++ G C++G I+ + M + +++ + M++G CK G ++EA
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
N+M G P+ + Y+ +I+GLC G+ D A L +M N TH ++L G
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G +A L +++ + D+ Y +VI+G+ K G +EA+ L K + G+ P+
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V +FN++ + + A +L + P+ VSY T++ G + +++L
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC-GNTKSIDELR 561
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
M G YS + KG C EN + E + +K
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 168/346 (48%), Gaps = 19/346 (5%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G + A+ F+Q K L +Y+ ++ L ++ +A + ++ + ++P + T
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP-NSRT 435
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ ++ G C+ GM+ A+ + D + +++ YN +I+G+ K G +EEA + ++
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G P+ T+N++IYG C + EA+ ++ ++L G +V ++ +++ G
Sbjct: 496 ETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN-T 554
Query: 314 QAVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKE------------MRAR 360
+++ LR M+A + P +Y V+ G C+ K + +L+E M +
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+ P ++N + + L L A + L+ M + + +YN +I LC+ G ++
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY-GYIRK 673
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + + +L Y+ L+K +C +G+ E +++ H+++ +
Sbjct: 674 ADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 719
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 125/267 (46%), Gaps = 16/267 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ + I+ A E F ++V E + P V+T+ ++I GYCK I A+K+ DV+
Sbjct: 471 YNIVIDGYAKSGCIEEALELF-KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC----- 272
+ P++++Y T+++ + G + + EM G P +TY+ + GLC
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 589
Query: 273 ------INGRV-DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+ R+ ++ K + M G + T+ ++++ LC V A +L +
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
N++ +Y ++I+ C G +A S + ++ + + + F++ + + G+ + A
Sbjct: 650 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLC 412
+ L Q+ + Y+ +I LC
Sbjct: 710 VKLFHQLLHRGFNVSIRDYSAVINRLC 736
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 116/237 (48%), Gaps = 9/237 (3%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+YN+++ F + ++ + K + + NE TY+ ++ GLC ++++A + +
Sbjct: 161 SYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTS 213
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+V + S++ G C +G D A + V++ + P V S+ ++ING C +G
Sbjct: 214 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
EA+ L +M G++P ++N + + G + A +++ M P+ ++Y +
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM-YSCLLKGYCEEGNVENVMQIAHEM 463
+CG C G + L+ M+ G L+ + S +L G C+ G ++ + + ++M
Sbjct: 334 LCGQCQL-GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N T+ +++ GLC K + AV +LR ++ P V S+ +++G+CK+G D A S
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG---L 411
+ GL P+V+S N + L G + A+ L M + P+ V+YN + G L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M G + + D++D+ G + D Y+ LL G C+ GN++ + + +M+++
Sbjct: 306 GMISGAWEVIRDMLDK----GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 16/199 (8%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
SY +L+ + K +E ++ E + PP TY+ + +G C+ EN V
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGI-PPTNVTYSVIFKGLCRGWKHENCNHVLRE 598
Query: 218 -------------DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
+ + P+ + YNT+I C+ L A + M +R + TY
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I LC+ G + +A + ++ + + +++K CV G + AV ++
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 718
Query: 325 ANMNPDVKSYEVVINGFCK 343
N ++ Y VIN C+
Sbjct: 719 RGFNVSIRDYSAVINRLCR 737
>gi|255660884|gb|ACU25611.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 484
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 215/432 (49%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSSKTSEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG V+ ++ F + +++ + SYN+L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKEXIVQESVKMFQKMEELGVERTIKSYNALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC +A L+ +M+ + P D + +I+ CK G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEXMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++ + G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 150/318 (47%), Gaps = 7/318 (2%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
I N + + + VL + + A +FF + + N+ + T+ +I + +
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 212 NAKKVFDVMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+A+ + M K L ++ MI+ + K+ ++E+ K +M G +YNA
Sbjct: 63 HARCILLDMPKKG--LEWDEDMWVMMIDSYGKEXIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ + GR AK KM G + T M+ G + GK + A + ++
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++PDV +Y +ING+ ++ K +EA EM+ R ++PTV ++ + + V ++D A+
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+++M PN ++Y+T++ GLC A+ + L + M + D +++ L+
Sbjct: 241 RLVEEMKGFGIKPNAITYSTLLPGLCNAEXMSEARVILKEMMDKYLAPTDNSIFMRLISS 300
Query: 447 YCEEGNVENVMQIAHEMV 464
+C+ GN++ + M+
Sbjct: 301 HCKSGNLDAAADVLKAMI 318
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q+ K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
M V AYN+++ + KK E +AK ++ M+ P+ + +++ L
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 187/378 (49%), Gaps = 42/378 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI+ + D G + F + + + C +YN+L+ ++ +K A E F + +
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIF-EFMM 309
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E V P+V TYT +I G C +G + A ++ ++M K PN++ YN +IN CK +
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVA 369
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA-KMLMAKMRLNGFKD-NVSTHKS 301
+A + + M R RP+ +TYN+++ GLC G +DEA K+L ++ + + D +V + +
Sbjct: 370 DALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNA 429
Query: 302 MLKGLCVVGKFDQAV----------------------------GYLRNVME-------AN 326
++ GLC + QA+ G + ME +
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK 489
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P+ +Y +I+GFCK G + A LL +MR L P+VF +N + L + G LD+A
Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAW 549
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L ++M + D P+ +S+N +I G + G ++ E L+ M +G + D YS L+
Sbjct: 550 RLFEEMQRDDSFPDVISFNIMIDG-SLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINR 608
Query: 447 YCEEGNVENVMQIAHEMV 464
+ + G ++ + +M+
Sbjct: 609 FLKLGYLDEAISFFDKMI 626
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 180/364 (49%), Gaps = 41/364 (11%)
Query: 139 VKAAIFWFHQAKQIENGACL-YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS-- 195
+K A+ F QA +++G L ++ N+L+ LVR + ++A F+ ++++ + VS
Sbjct: 54 LKNAVSVFQQA--VDSGGSLSFAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLS 111
Query: 196 --------------------------------TYTTMIRGYCKMGMIENAKKVFDVM--- 220
Y +++G C+ A + M
Sbjct: 112 GLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQN 171
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
++ P++++YNT+I GFC+ ELE+A + NEM GC + +T+ +I C G++DEA
Sbjct: 172 SLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
L+ +M+ G + ++ + S+++G C G+ D+ V+E +P +Y +I G
Sbjct: 232 MGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
FCK+G+ EA + + M RG++P V+++ + L G+ A+ LL M Q D PN
Sbjct: 292 FCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPN 351
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+YN II LC + D ++V+ M + D Y+ LL G C +G+++ ++
Sbjct: 352 VVTYNIIINKLC-KDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLL 410
Query: 461 HEMV 464
+ M+
Sbjct: 411 YLML 414
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 136/310 (43%), Gaps = 43/310 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKEN-VVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+YNSLLG L + A + + ++K++ PDV ++ +I G CK + A ++D
Sbjct: 389 TYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYD 448
Query: 219 VMTVK--------------------------------------PNLLAYNTMINGFCKKG 240
++ K PN Y TMI+GFCK G
Sbjct: 449 LLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTG 508
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
L AK + +M P+ YN ++ LC G +D+A L +M+ + +V +
Sbjct: 509 MLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFN 568
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
M+ G G A L + A ++PD+ +Y +IN F K+G DEAIS +M
Sbjct: 569 IMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDS 628
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G +P ++V + + GE D+ +K++ D + + T++ +C + G M
Sbjct: 629 GFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNM-- 686
Query: 421 VEDLVDRMIR 430
D+ R++R
Sbjct: 687 --DIAKRLLR 694
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 161/369 (43%), Gaps = 43/369 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI G K A+ + Q + + +YN ++ L + + + A E +++K
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIV-ELMK 379
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-----VKPNLLAYNTMINGFC---- 237
+ PD TY +++ G C G ++ A K+ +M P+++++N +I+G C
Sbjct: 380 KRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNR 439
Query: 238 -------------------------------KKGELEEAKKCMNEMMNRGCRPNELTYNA 266
K G++ +A + ++ N PN TY
Sbjct: 440 LHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTT 499
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
MI G C G ++ AK L+ KMRL+ +V + +L LC G DQA + +
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDD 559
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
PDV S+ ++I+G K G A SLL M GL P +F+++ + ++ G LD AI
Sbjct: 560 SFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+M P+ ++++ C+++G + + V +++ LD + ++
Sbjct: 620 SFFDKMIDSGFEPDAHICDSVL-KYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDY 678
Query: 447 YC-EEGNVE 454
C GN++
Sbjct: 679 MCSSSGNMD 687
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 1/152 (0%)
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A G L +++ +V +Y +++ G C+ + +A+SLL+EMR L P V S+N V R
Sbjct: 126 AHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIR 185
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
E EL++A+ L +M C + V++ +I C A G+M + L+ M G
Sbjct: 186 GFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKA-GKMDEAMGLLKEMKHKGLE 244
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D +Y+ L++G+C+ G ++ + E++ +
Sbjct: 245 ADLIVYTSLIRGFCDCGELDRGKALFDEVLER 276
>gi|326497659|dbj|BAK05919.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 523
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 175/347 (50%), Gaps = 15/347 (4%)
Query: 100 DVLLSHSLISIAASLLKNSNKLSDFFISK--------LIKAYGDRGNVKAAIFWFHQAKQ 151
D L+S + A L+ + L + ++ LIK Y G+ + A + ++
Sbjct: 178 DRLVSSRCPDVLADLIADLRDLRNKYLPAPNTCVYNILIKHYVKNGDSETAFRVLDEMRE 237
Query: 152 IENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
G L +Y++LLG L R +K A E F +++++ + PD TY +I G+C++G
Sbjct: 238 YTCGDVRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLG 297
Query: 209 MIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+E A+ +F M +PN Y T+ING CKKG++E AK EM + G P+ ++Y
Sbjct: 298 QVEKARTIFGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAGVEPDAVSYT 357
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
A+I LC +G VDE L+ +MR G K +V T+ +L+GLC G+ + + L + E
Sbjct: 358 ALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVMDLLGRLPEE 417
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ +V SY +V+N C G ++A+ LL M RG P + N + L + G + A
Sbjct: 418 GVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLGRGFLPHYAASNKLLIGLCDVGRVADA 477
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L + + +P + +I +C + + VE L+D +I G
Sbjct: 478 TAALYGLAKFGFMPEASCWAKLIEAVCRDRKLRRSVE-LLDILITGG 523
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 149/280 (53%), Gaps = 5/280 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMINGFCKKGELEEA 245
V P++ TY+T++ G C+ G ++ A ++F+ M K P+ L YN +I+GFC+ G++E+A
Sbjct: 243 VRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKA 302
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M C PN Y +I G C G V+ AK++ +MR G + + ++ +++
Sbjct: 303 RTIFGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGC 362
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G D+ + + + E DV +Y +++ G CK G+ E + LL + G++
Sbjct: 363 LCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVMDLLGRLPEEGVQLN 422
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V S+ V L +G++++A+ LL M LP++ + N ++ GLC GR+ D +
Sbjct: 423 VASYRIVMNTLCSSGDMEKAVGLLGLMLGRGFLPHYAASNKLLIGLCDV-GRVADATAAL 481
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ + G + + ++ L++ C + + +++ ++T
Sbjct: 482 YGLAKFGFMPEASCWAKLIEAVCRDRKLRRSVELLDILIT 521
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 5/238 (2%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC---RPNELTYNAMIYGLCINGRVDEA 280
PN YN +I + K G+ E A + ++EM C RPN +TY+ ++ GLC G++ EA
Sbjct: 207 PNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEA 266
Query: 281 KMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
L M + + T+ ++ G C +G+ ++A + + P+ +Y +IN
Sbjct: 267 FELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLIN 326
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G CK G + A + +EMR+ G++P S+ A+ L +G +D I L+ +M + C
Sbjct: 327 GHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKA 386
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ V+YN ++ GLC GRM +V DL+ R+ G L+ Y ++ C G++E +
Sbjct: 387 DVVTYNLLLEGLC-KDGRMAEVMDLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAV 443
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 219/433 (50%), Gaps = 33/433 (7%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 13 ELVYNVLHAAKTSEHALQFFRWVERSNL----FEHDRETHLKIIEILGRASKLNHARCIL 68
Query: 116 KNSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVR 170
+ K D ++ +I +YG G V+ ++ F + +++ + SY++L V++R
Sbjct: 69 LDMPKKGLEWDEDMWVL-MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMR 127
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLL 227
+A+ +F++++ E + P T+ MI G+ G ++ A + F+ M + P+++
Sbjct: 128 RGRFMMAKRYFNKMLSEG-IEPTRHTFNVMIWGFFLSGKMDTAMRFFEDMKSREISPDVV 186
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YNTMING + +++EA+K EM + P +TY +I G +V +A L+ +M
Sbjct: 187 TYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVHDALRLVEEM 246
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGK 346
+ G K N T+ ++L GLC GK +A L+ +++ + P D + +I+ C+ G
Sbjct: 247 KGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGN 306
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PN 400
D A +LK M ++ +V + + +L+EN G+ DRA+ LL ++ + D + P
Sbjct: 307 LDAAADVLKAM----IRLSVPTEAGHYGVLIENFCKAGQHDRAVKLLDKLIEKDIILRPQ 362
Query: 401 FV------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+YN +I LC + G+ E LV ++++ G D T + L++GY +EG+ +
Sbjct: 363 STLHMEPSAYNPMIEYLC-SNGQTAKAEALVRQLLKLGVQ-DTTALNTLIRGYAQEGSPD 420
Query: 455 NVMQIAHEMVTKK 467
+ ++ M+ +K
Sbjct: 421 SAFELLKIMLRRK 433
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V D + T+IRGY + G ++A ++ +
Sbjct: 371 AYNPMIEYLCSNGQTAKAEALVRQLLKLGV--QDTTALNTLIRGYAQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
M V AY+ ++ + KK E +AK ++ M+ P+ + +++
Sbjct: 429 MLRRKVDSEKSAYDALVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVM 480
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 170/320 (53%), Gaps = 5/320 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G+ A+ + ++ A +++Y++++ L R I A F ++ + + V T
Sbjct: 197 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI-KSSVVT 255
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y +++RG CK G + + M + PN++ +N +++ F K+G+L+EA + EM+
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG PN +TYN ++ G C+ R+ EA ++ M N ++ T S++KG C+V + D
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ RN+ + + + +Y +++ GFC+ GK A L +EM + G+ P V ++ +
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L +NG+L++A+ + + + + V Y TII G+C G+++D +L + G
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG-GKVEDAWNLFCSLPCKGV 494
Query: 434 NLDFTMYSCLLKGYCEEGNV 453
+ Y+ ++ G C++G++
Sbjct: 495 KPNVMTYTVMISGLCKKGSL 514
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 168/322 (52%), Gaps = 8/322 (2%)
Query: 150 KQIE-NGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
KQ+E NG +Y+ N ++ R A +++K PD +T+ T+I+G
Sbjct: 102 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTLIKGLFL 160
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G + A + D M +P+++ YN+++NG C+ G+ A + +M R + + T
Sbjct: 161 EGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFT 220
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y+ +I LC +G +D A L +M G K +V T+ S+++GLC GK++ L++++
Sbjct: 221 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 280
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ P+V ++ V+++ F K GK EA L KEM RG+ P + ++N + L
Sbjct: 281 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 340
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A +L M + C P+ V++ ++I G CM K R+ D + + + G + YS L
Sbjct: 341 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK-RVDDGMKVFRNISKRGLVANAVTYSIL 399
Query: 444 LKGYCEEGNVENVMQIAHEMVT 465
++G+C+ G ++ ++ EMV+
Sbjct: 400 VQGFCQSGKIKLAEELFQEMVS 421
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 156/290 (53%), Gaps = 3/290 (1%)
Query: 180 FFHQIVKENVVPP--DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFC 237
F ++++ +P D S + + I + ++ + K ++ + N+ N MIN FC
Sbjct: 65 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 124
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+ + A + ++M G P+ T+N +I GL + G+V EA +L+ +M NG + +V
Sbjct: 125 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 184
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ S++ G+C G A+ LR + E N+ DV +Y +I+ C+ G D AISL KEM
Sbjct: 185 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 244
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+G+K +V ++N++ R L + G+ + LLLK M + +PN +++N ++ + + +G+
Sbjct: 245 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL-DVFVKEGK 303
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+Q+ +L MI G + + Y+ L+ GYC + + + MV K
Sbjct: 304 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 185/376 (49%), Gaps = 9/376 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y +I + + S+A LL+ N +D F S +I + G + AAI F + +
Sbjct: 186 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 245
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +YNSL+ L + +V +V P+V T+ ++ + K G +
Sbjct: 246 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV-PNVITFNVLLDVFVKEGKL 304
Query: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A +++ M + PN++ YNT+++G+C + L EA ++ M+ C P+ +T+ ++
Sbjct: 305 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 364
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C+ RVD+ + + G N T+ +++G C GK A + ++ +
Sbjct: 365 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 424
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PDV +Y ++++G C GK ++A+ + ++++ + + + + + + G+++ A
Sbjct: 425 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 484
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L +P PN ++Y +I GLC KG + + L+ +M G+ + Y+ L++ +
Sbjct: 485 LFCSLPCKGVKPNVMTYTVMISGLC-KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 543
Query: 448 CEEGNVENVMQIAHEM 463
+G++ ++ EM
Sbjct: 544 LRDGDLTASAKLIEEM 559
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 166/349 (47%), Gaps = 9/349 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ I D L I A SL K K S + L++ G
Sbjct: 221 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 280
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
E + ++N LL V V+ ++ A E + +++ + P++ TY T++ GYC +
Sbjct: 281 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI-SPNIITYNTLMDGYCMQNRL 339
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A + D+M P+++ + ++I G+C +++ K + RG N +TY+ +
Sbjct: 340 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 399
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ G C +G++ A+ L +M +G +V T+ +L GLC GK ++A+ ++ ++ M
Sbjct: 400 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 459
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ + Y +I G CK GK ++A +L + +G+KP V ++ + L + G L A +
Sbjct: 460 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 519
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
LL++M + PN +YNT+I + G + L++ M G + D
Sbjct: 520 LLRKMEEDGNAPNDCTYNTLIRAH-LRDGDLTASAKLIEEMKSCGFSAD 567
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 38/154 (24%)
Query: 346 KSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP----------- 393
K D+AI+L +EM R+R L P++ F+ F + + + + KQ+
Sbjct: 58 KKDDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 116
Query: 394 --QMDCL----------------------PNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
++C P+ ++NT+I GL + +G++ + LVDRM+
Sbjct: 117 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFL-EGKVSEAVVLVDRMV 175
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+G D Y+ ++ G C G+ + + +M
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 209
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
A++ EM+ RG PN +TY+++I G C R+DEA ++ M G D
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSD 767
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 26/35 (74%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
+ PN + Y+++I+GFCK+ L+EA + ++ M+ +G
Sbjct: 730 IAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 214/485 (44%), Gaps = 84/485 (17%)
Query: 58 VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN 117
VT VI Q +P AL FN + + HT Y +I + L + +L +
Sbjct: 10 VTTVIRCQKDPMKALEMFNSMRKED----GFKHTLSTYRSIIEKLGLYGKFEAMEEVLVD 65
Query: 118 -----SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
N + + +K YG +G V+ A+ F + + ++SYN+++ +LV
Sbjct: 66 MRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSG 125
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAY 229
A + + ++ ++ + PDV ++T ++ +C+ A ++ + M+ + N++AY
Sbjct: 126 YFDQAHKVYMRM-RDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 230 NTMINGF-----------------------------------CKKGELEEAKKCMNEMMN 254
T++ GF CKKG+++E +K +++++
Sbjct: 185 CTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIK 244
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
RG PN TYN I GLC G +D A ++ ++ G K +V T+ ++ GLC KF +
Sbjct: 245 RGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQE 304
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCK------------------------------- 343
A YL ++ + PD +Y +I G+CK
Sbjct: 305 AEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLID 364
Query: 344 ----IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G+++ A++L E +G+KP V +N + + L G + A L +M + +P
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIP 424
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
++N ++ GLC G + D + LV MI G+ D ++ L+ GY + +EN ++I
Sbjct: 425 EVQTFNILVNGLC-KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 460 AHEMV 464
M+
Sbjct: 484 LDVMM 488
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 162/347 (46%), Gaps = 38/347 (10%)
Query: 157 CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP------------------------- 191
CL ++N LL VL + +K E+ +++K V+P
Sbjct: 215 CLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMV 274
Query: 192 ---------PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
PDV TY +I G CK + A+ + ++P+ YNT+I G+CK
Sbjct: 275 GRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKG 334
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A++ + + G P+E TY ++I GLC G + A L + G K NV +
Sbjct: 335 GMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++KGL G +A + E + P+V+++ +++NG CK+G +A L+K M +
Sbjct: 395 NTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G P +F+FN + +++ A+ +L M P+ +YN+++ GLC + +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTS-KYE 513
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
DV + M+ G + ++ LL+ C ++ + + EM K
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNK 560
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 194/439 (44%), Gaps = 88/439 (20%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEF 180
+FFI L + +G + AA+ + I+ G + +YN L+ L + + + AE +
Sbjct: 255 NFFIQGLCQ----KGELDAAVRMV--GRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVY 308
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK-----VFDVMTVKPNLLAYNTMING 235
++V E + PD TY T+I GYCK GM++ A++ VF+ P+ Y ++I+G
Sbjct: 309 LGKLVNEGL-EPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFV--PDEFTYRSLIDG 365
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
C +GE A NE + +G +PN + YN +I GL G + EA L ++M G
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPE 425
Query: 296 VSTHKSMLKGLCVVG-----------------------------------KFDQAVGYLR 320
V T ++ GLC +G K + A+ L
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+M+ ++PDV +Y ++NG CK K ++ + K M +G P +F+FN + L
Sbjct: 486 VMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYH 545
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG---------RMQDV---------- 421
+LD+A+ LL++M P+ V++ T+I G C +M++V
Sbjct: 546 KLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTY 605
Query: 422 ----------------EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
E L M+ D Y ++ G+C+ GNV+ + EM+
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMM- 664
Query: 466 KKGRLLKLKNFLTRVVDAL 484
+ G + L L RV++ L
Sbjct: 665 ENGFIPSLTT-LGRVINCL 682
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 42/288 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ L ++ + A+ ++ + P D+ T+ +I GY +ENA ++ DV
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFP-DIFTFNILIHGYSTQLKMENALEILDV 486
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P++ YN+++NG CK + E+ + M+ +GC PN T+N ++ LC +
Sbjct: 487 MMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHK 546
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM--------- 327
+D+A L+ +M+ + T +++ G C G D A R + E M
Sbjct: 547 LDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYN 606
Query: 328 ---------------------------NPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
PD +Y ++++GFCK G D L EM
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMEN 666
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
G P++ + V L + A ++ +M Q +P V NTI
Sbjct: 667 GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTIF 712
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 5/177 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L+++N LL L R + + A ++ K V PD T+ T+I G+CK G ++ A +F
Sbjct: 531 LFTFNILLESLCRYHKLDKALGLLEEM-KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 218 ----DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
+V V + YN +I+ F +K + A+K EM++R P+ TY M+ G C
Sbjct: 590 RKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
G VD + +M NGF +++T ++ LCV + +A G + +++ + P+
Sbjct: 650 TGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 147/266 (55%), Gaps = 10/266 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++++L+ V+ + AE+ + ++VK ++ P + TY+++I G+C ++ AK++F
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K P++++Y+T+I GFCK ++E + EM RG N +TY +I GL
Sbjct: 385 EFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQA 444
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A+ + +M +G N+ T+ ++L GLC GK ++A+ + + M P + +Y
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I G CK GK ++ L + +G+KP V ++N + G + A L K+M +
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQD 420
LPN YNT+I + R++D
Sbjct: 565 DGTLPNSGCYNTLI------RARLRD 584
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 170/341 (49%), Gaps = 5/341 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
SKL+ A I Q + + Y+Y+ L+ R + + LA +++
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGEL 242
K P++ T ++++ GYC I A + D M V +PN + +NT+I+G +
Sbjct: 144 KLGY-EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA ++ M+ +GC+P+ +TY ++ GLC G D A +L+ KM + V + ++
Sbjct: 203 SEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTI 262
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC D A+ + + + P+V +Y +I+ C G+ +A LL +M R +
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P VF+F+A+ V+ G+L A L +M + P+ V+Y+++I G CM R+ + +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM-HDRLDEAK 381
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ + M+ D YS L+KG+C+ V+ M++ EM
Sbjct: 382 QMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREM 422
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 163/307 (53%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L A ++ E + PDV T++ +I + K G + A+K++D
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ P+++ Y+++INGFC L+EAK+ M+++ C P+ ++Y+ +I G C R
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDE L +M G N T+ ++++GL G D A + ++ + P++ +Y
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G CK GK ++A+ + + ++ ++PT++++N + + + G+++ L +
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+YNT+I G C KG ++ + L M G + Y+ L++ +G+ E
Sbjct: 532 VKPDVVAYNTMISGFC-RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 457 MQIAHEM 463
++ EM
Sbjct: 591 AELIKEM 597
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 144/277 (51%), Gaps = 4/277 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
P+ T+ T+I G A + D M K P+L+ Y ++NG CK+G+ + A
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFIL 243
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+N+M P L Y +I GLC N +D+A L +M G + NV T+ S++ LC
Sbjct: 244 LNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G++ A L +++E +NPDV ++ +I+ F K GK EA L EM R + P++ +
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++++ + LD A + + M C P+ VSY+T+I G C AK R+ + +L M
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAK-RVDEGMELFREM 422
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ G + Y+ L++G + G+ + +I EMV+
Sbjct: 423 SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS 459
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 158/301 (52%), Gaps = 5/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y ++ L + LA +++ ++ + P V YTT+I G CK +++A +F
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFILLNKM-EQGKLEPGVLIYTTIIDGLCKNKHMDDALNLF 279
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++PN++ Y+++I+ C G +A + +++M+ R P+ T++A+I
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++ EA+ L +M ++ T+ S++ G C+ + D+A ++ + PDV SY
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSY 399
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I GFCK + DE + L +EM RGL ++ + + L + G+ D A + K+M
Sbjct: 400 STLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS 459
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN ++YNT++ GLC G+++ + + + RS Y+ +++G C+ G VE
Sbjct: 460 DGVPPNIMTYNTLLDGLC-KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 455 N 455
+
Sbjct: 519 D 519
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 160/310 (51%), Gaps = 7/310 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ LL + ++N + Q+ +N+ +P + TY+ +I +C+ + A V
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQM--QNLGMPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +PN++ ++++NG+C + EA +++M G +PN +T+N +I+GL ++ +
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
EA L+ +M G + ++ T+ ++ GLC G D A L + + + P V Y
Sbjct: 202 ASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTT 261
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G CK D+A++L KEM +G++P V +++++ L G A LL M +
Sbjct: 262 IIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ +++ +I + +G++ + E L D M++ + YS L+ G+C ++
Sbjct: 322 INPDVFTFSALIDAF-VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 457 MQIAHEMVTK 466
Q+ MV+K
Sbjct: 381 KQMFEFMVSK 390
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 166/341 (48%), Gaps = 17/341 (4%)
Query: 136 RGNVKA-----AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKL--AEEFFHQIVKEN 188
RGNV + FW ++ +G Y Y L ++ +KL A F ++VK
Sbjct: 22 RGNVATVSPSFSFFW----RRAFSGKTSYDYREKLS-RNGLSELKLDDAVALFGEMVKSR 76
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P + ++ ++ KM + + + M + N Y+ +IN FC++ +L A
Sbjct: 77 PFPS-IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLA 135
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +MM G PN +T ++++ G C + R+ EA L+ +M + G++ N T +++ G
Sbjct: 136 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L + K +AV + ++ PD+ +Y VV+NG CK G +D A LL +M L+P
Sbjct: 196 LFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPG 255
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V + + L +N +D A+ L K+M PN V+Y+++I LC GR D L+
Sbjct: 256 VLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-NYGRWSDASRLL 314
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI N D +S L+ + +EG + ++ EMV +
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 5/231 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SY++L+ + + E F ++ + +V V TYTT+I+G + G + A+++F
Sbjct: 398 SYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV-TYTTLIQGLFQAGDCDMAQEIFKE 456
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V PN++ YNT+++G CK G+LE+A + P TYN MI G+C G+
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L + L G K +V + +M+ G C G ++A + + E P+ Y
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + + L+KEMR+ G + V +L +G LD++ L
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSFL 626
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 173/330 (52%), Gaps = 5/330 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G+ A+ + ++ A +++Y++++ L R I A F ++ + + V T
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI-KSSVVT 265
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y +++RG CK G + + M + PN++ +N +++ F K+G+L+EA + EM+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG PN +TYN ++ G C+ R+ EA ++ M N ++ T S++KG C+V + D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ RN+ + + + +Y +++ GFC+ GK A L +EM + G+ P V ++ +
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L +NG+L++A+ + + + + V Y TII G+C G+++D +L + G
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG-GKVEDAWNLFCSLPCKGV 504
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ Y+ ++ G C++G++ + +M
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 168/322 (52%), Gaps = 8/322 (2%)
Query: 150 KQIE-NGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
KQ+E NG +Y+ N ++ R A +++K PD +T+ T+I+G
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTLIKGLFL 170
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G + A + D M +P+++ YN+++NG C+ G+ A + +M R + + T
Sbjct: 171 EGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFT 230
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y+ +I LC +G +D A L +M G K +V T+ S+++GLC GK++ L++++
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ P+V ++ V+++ F K GK EA L KEM RG+ P + ++N + L
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A +L M + C P+ V++ ++I G CM K R+ D + + + G + YS L
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK-RVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 444 LKGYCEEGNVENVMQIAHEMVT 465
++G+C+ G ++ ++ EMV+
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVS 431
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 157/293 (53%), Gaps = 3/293 (1%)
Query: 177 AEEFFHQIVKENVVPP--DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMIN 234
A F ++++ +P D S + + I + ++ + K ++ + N+ N MIN
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
FC+ + A + ++M G P+ T+N +I GL + G+V EA +L+ +M NG +
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+V T+ S++ G+C G A+ LR + E N+ DV +Y +I+ C+ G D AISL
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
KEM +G+K +V ++N++ R L + G+ + LLLK M + +PN +++N ++ + +
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL-DVFVK 310
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+G++Q+ +L MI G + + Y+ L+ GYC + + + MV K
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 185/376 (49%), Gaps = 9/376 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y +I + + S+A LL+ N +D F S +I + G + AAI F + +
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +YNSL+ L + +V +V P+V T+ ++ + K G +
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV-PNVITFNVLLDVFVKEGKL 314
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A +++ M + PN++ YNT+++G+C + L EA ++ M+ C P+ +T+ ++
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C+ RVD+ + + G N T+ +++G C GK A + ++ +
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PDV +Y ++++G C GK ++A+ + ++++ + + + + + + G+++ A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L +P PN ++Y +I GLC KG + + L+ +M G+ + Y+ L++ +
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLC-KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 448 CEEGNVENVMQIAHEM 463
+G++ ++ EM
Sbjct: 554 LRDGDLTASAKLIEEM 569
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 166/349 (47%), Gaps = 9/349 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ I D L I A SL K K S + L++ G
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
E + ++N LL V V+ ++ A E + +++ + P++ TY T++ GYC +
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI-SPNIITYNTLMDGYCMQNRL 349
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A + D+M P+++ + ++I G+C +++ K + RG N +TY+ +
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ G C +G++ A+ L +M +G +V T+ +L GLC GK ++A+ ++ ++ M
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ + Y +I G CK GK ++A +L + +G+KP V ++ + L + G L A +
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
LL++M + PN +YNT+I + G + L++ M G + D
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAH-LRDGDLTASAKLIEEMKSCGFSAD 577
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 38/154 (24%)
Query: 346 KSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP----------- 393
K D+AI+L +EM R+R L P++ F+ F + + + + KQ+
Sbjct: 68 KKDDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 394 --QMDCL----------------------PNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
++C P+ ++NT+I GL + +G++ + LVDRM+
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFL-EGKVSEAVVLVDRMV 185
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+G D Y+ ++ G C G+ + + +M
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 158/313 (50%), Gaps = 7/313 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ R ++ A +F +++V E PD+ T ++RG C GM++NA K+F+
Sbjct: 266 TYNTIIHGYCREGQVEKAFQFRNKMV-EKSFKPDLFTCNILLRGLCTEGMLDNALKLFNT 324
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC-ING 275
K + + YNT+I+G CK+G EEA + EM + P+ TYNA++ L G
Sbjct: 325 WISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEG 384
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+V++A KM FK ++ T +L+GLC G D A+ + D +Y
Sbjct: 385 QVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYN 444
Query: 336 VVINGFCKIGKSDEAISLLKEMRAR-GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G CK G+ +EA LL EM + GL P ++N + G++++A +M +
Sbjct: 445 TIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVE 504
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ + N ++ GLC +G + L + I G +D Y+ ++ G C+EG E
Sbjct: 505 KSFKPDLFTCNILLRGLCR-EGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFE 563
Query: 455 NVMQIAHEMVTKK 467
+ EM KK
Sbjct: 564 EAFDLLAEMKEKK 576
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 192/384 (50%), Gaps = 32/384 (8%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNS---IKLAEEFFHQIVKENV------------- 189
F++ K++ L + N+L+ LVR S + L++ F ++K V
Sbjct: 158 FNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIGLIGK 217
Query: 190 -----VPPDVSTYTTMIR--GYCKMGMIENA-KKVFDVMT--VKPNLLAYNTMINGFCKK 239
PD ++Y T++ C+ G + + K+ +++ + P+ + YNT+I+G+C++
Sbjct: 218 MKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCRE 277
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G++E+A + N+M+ + +P+ T N ++ GLC G +D A L G + T+
Sbjct: 278 GQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTY 337
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI-GKSDEAISLLKEMR 358
+++ GLC G+F++A L + E + PD +Y ++ G+ ++A +M
Sbjct: 338 NTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMV 397
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+ KP +F+ N + R L G LD A+ L + V+YNTII GLC +GR
Sbjct: 398 EKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLC-KEGRF 456
Query: 419 QDVEDLVDRM-IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL-LKLKNF 476
++ DL+ M ++G D T Y+ ++ GYC EG VE Q ++MV K + L N
Sbjct: 457 EEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNI 516
Query: 477 LTRVV--DALLLMWIVTGGSWISR 498
L R + + +L+ + +WIS+
Sbjct: 517 LLRGLCREGMLVKALKLFNTWISK 540
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 147/286 (51%), Gaps = 17/286 (5%)
Query: 114 LLKNSNKLSDFFISK-----------LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYN 162
+L N+ KL + +ISK +I G + A + ++ + G Y+YN
Sbjct: 314 MLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYN 373
Query: 163 SLLGVLVRVNS-IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
++L L ++ A +F +++V E PD+ T ++RG C GM++NA K+F+
Sbjct: 374 AILCALADAEGQVEKAFQFRNKMV-EKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWI 432
Query: 222 VKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNR-GCRPNELTYNAMIYGLCINGRV 277
K + + YNT+I+G CK+G EEA + EM + G P++ TYN +I G C G+V
Sbjct: 433 SKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQV 492
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
++A KM FK ++ T +L+GLC G +A+ + D +Y +
Sbjct: 493 EKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTI 552
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
I+G CK G+ +EA LL EM+ + L P +++NA+ L + G ++
Sbjct: 553 ISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRME 598
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 143/283 (50%), Gaps = 11/283 (3%)
Query: 145 WFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
W + K I+ +YN+++ L + + A + ++ +E + PD TY ++
Sbjct: 325 WISKGKAID----AVTYNTIISGLCKEGRFEEAFDLLAEM-EEKKLGPDCYTYNAILCAL 379
Query: 205 CKM-GMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
G +E A + + M + KP+L N ++ G C +G L+ A K N +++G +
Sbjct: 380 ADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 439
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMR-LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+TYN +I GLC GR +EA L+A+M NG + +T+ +++ G C G+ ++A +
Sbjct: 440 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFR 499
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
++E + PD+ + +++ G C+ G +A+ L ++G ++N + L +
Sbjct: 500 NKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKE 559
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
G + A LL +M + P+ +YN I+C L A GRM+ E
Sbjct: 560 GRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADA-GRMEAEE 601
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 26/262 (9%)
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC----------------- 272
+T I + A + N M +PN LT N +I L
Sbjct: 139 DTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTN 198
Query: 273 -----INGRVDEAKMLMAKMR-LNGFKDNVSTHKSM-LKGLCVVGKFDQAVGYLRNVMEA 325
+ ++ EA L+ KM+ + F DN S + + + LC GK DQ++ L ++E+
Sbjct: 199 VIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLES 258
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ P +Y +I+G+C+ G+ ++A +M + KP +F+ N + R L G LD A
Sbjct: 259 GLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNA 318
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ L + V+YNTII GLC +GR ++ DL+ M D Y+ +L
Sbjct: 319 LKLFNTWISKGKAIDAVTYNTIISGLC-KEGRFEEAFDLLAEMEEKKLGPDCYTYNAILC 377
Query: 446 GYCE-EGNVENVMQIAHEMVTK 466
+ EG VE Q ++MV K
Sbjct: 378 ALADAEGQVEKAFQFRNKMVEK 399
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++ R ++ A +F +++V E PD+ T ++RG C+ GM+ A K+F+
Sbjct: 478 TYNTIILGYCREGQVEKAFQFRNKMV-EKSFKPDLFTCNILLRGLCREGMLVKALKLFNT 536
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
K + + YNT+I+G CK+G EEA + EM + P+ TYNA++ L GR
Sbjct: 537 WISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGR 596
Query: 277 VDEAKMLMAKM 287
+ EA+ M+K+
Sbjct: 597 M-EAEEFMSKI 606
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 193/389 (49%), Gaps = 48/389 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK-- 186
L+ ++ ++G + A Q+ ++E C NSLL LV+++ ++ A + F + ++
Sbjct: 144 LVSSFAEKGKLHCATALLLQSYEVE--GCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQ 201
Query: 187 ---------------------ENVVP-----------PDVSTYTTMIRGYCKMGMIENAK 214
E V PD+ TY T+I+G+CK ++ A
Sbjct: 202 SCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKAN 261
Query: 215 KVFDVMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
++FD + P+++ Y +MI+G+CK G+++EA +++M+ G P +T+N ++ G
Sbjct: 262 EMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDG 321
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
G + A+ + KM G +V T S++ G C VG+ +Q + M P+
Sbjct: 322 YAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPN 381
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+Y ++IN CK + +A LL ++ ++ + P F +N V + G+++ AI++++
Sbjct: 382 AFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVE 441
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD----FTMYSCLLK- 445
+M + C P+ +++ +I G CM KGRM + + +M+ G + D ++ SCLLK
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCM-KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
Query: 446 GYCEEGNVENVMQIAHEMVTKKGRLLKLK 474
G +E N QIAH+ G L+ K
Sbjct: 501 GMAKEAYHLN--QIAHKGQINDGAPLETK 527
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 151/325 (46%), Gaps = 4/325 (1%)
Query: 144 FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
FW ++ ++YN L L + LA + F + +K + + P+ ++
Sbjct: 89 FWEFSRFKLNIRHSFWTYNLLTRSLCKAGMHDLAGQMF-ECMKSDGISPNSRLLGFLVSS 147
Query: 204 YCKMGMIENAKKVF-DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
+ + G + A + V+ + N+++N K +E+A K E + +
Sbjct: 148 FAEKGKLHCATALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTK 207
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
T+N +I GLC G+ ++A L+ M G ++ T+ +++KG C + +A +V
Sbjct: 208 TFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDV 267
Query: 323 MEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
++ +PDV +Y +I+G+CK GK EA LL +M G+ PT +FN + + GE
Sbjct: 268 KSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+ A + +M C P+ V++ ++I G C G++ L + M G + YS
Sbjct: 328 MHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV-GQVNQGFRLWEEMNARGMFPNAFTYS 386
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTK 466
L+ C+E + ++ ++ +K
Sbjct: 387 ILINALCKENRLLKARELLGQLASK 411
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 87/184 (47%), Gaps = 4/184 (2%)
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
++ +LN + + T+ + + LC G D A + ++P+ + +++ F +
Sbjct: 93 SRFKLN-IRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEK 151
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
GK A +LL +++ ++ N++ LV+ ++ A+ L ++ + + ++
Sbjct: 152 GKLHCATALL--LQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTF 209
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
N +I GLC G+ + +L+ M G D Y+ L+KG+C+ ++ ++ ++
Sbjct: 210 NILIRGLC-GVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVK 268
Query: 465 TKKG 468
+ G
Sbjct: 269 SSSG 272
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 179/358 (50%), Gaps = 11/358 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLKN----SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ + D+ + A S L K S + + LI + G++ AA +
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMI 464
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +Y SL+G I A +H++ + +VP + T+TT++ G + G+I
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPS-IYTFTTLLSGLFRAGLI 523
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+A K+F M VKPN + YN MI G+C++G + +A + +NEM+ +G P+ +Y +
Sbjct: 524 RDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPL 583
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I+GLC+ G+ EAK+ + + + N + +L G C GK ++A+ +++ +
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGV 643
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ D+ Y V+I+G K + LLKEM RGLKP + ++ + G+ A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL-DFTMYSCLL 444
+ M C+PN V+Y +I GLC A G + + E L +M R G+++ + Y C L
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKA-GFVNEAEILCSKM-RPGNSVPNQVTYGCFL 759
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 160/322 (49%), Gaps = 8/322 (2%)
Query: 151 QIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
Q+E C + YN L+ L + + A + + + PDV TY T++ G CK+
Sbjct: 252 QMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKEL-KPDVVTYCTLVCGLCKV 310
Query: 208 GMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
E ++ D M P+ A ++++ G K+G++EEA + + G PN Y
Sbjct: 311 QEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVY 370
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
NA+I LC DEA++L +M G N T+ ++ C GK D A+ +L +++
Sbjct: 371 NALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMID 430
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P V Y +ING CK G A SL+ EM + L+PTV ++ ++ G++++
Sbjct: 431 MGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A+ L +M +P+ ++ T++ GL A G ++D L M + Y+ ++
Sbjct: 491 ALRLYHEMTGKGIVPSIYTFTTLLSGLFRA-GLIRDAVKLFTEMAEWNVKPNRVTYNVMI 549
Query: 445 KGYCEEGNVENVMQIAHEMVTK 466
+GYCEEGN+ + +EM+ K
Sbjct: 550 EGYCEEGNMSKAFEFLNEMIEK 571
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 183/404 (45%), Gaps = 47/404 (11%)
Query: 108 ISIAASLLKN--SNKLSDFFIS--KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNS 163
IS A SL+ + KL ++ L+ Y +G + A+ +H+ +Y++ +
Sbjct: 453 ISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTT 512
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK 223
LL L R I+ A + F ++ + NV P V TY MI GYC+ G + A + + M K
Sbjct: 513 LLSGLFRAGLIRDAVKLFTEMAEWNVKPNRV-TYNVMIEGYCEEGNMSKAFEFLNEMIEK 571
Query: 224 ---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
P+ +Y +I+G C G+ EAK ++ + C NE+ Y +++G C G+++EA
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 281 KM-----------------------------------LMAKMRLNGFKDNVSTHKSMLKG 305
L+ +M G K + + SM+
Sbjct: 632 LSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDA 691
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
G F +A G ++ P+ +Y VING CK G +EA L +MR P
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPN 751
Query: 366 VFSFNAVFRILVEN-GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++ IL + G++ +A+ L + + L N +YN +I G C +GRM++ +L
Sbjct: 752 QVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFC-RQGRMEEASEL 809
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ RMI G + D Y+ ++ C +V+ +++ + M T+KG
Sbjct: 810 ITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSM-TEKG 852
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 159/343 (46%), Gaps = 42/343 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
+Y +L+ L +V ++ E ++++ P + + ++++ G K G +E A K+
Sbjct: 299 TYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAV-SSLVEGLRKRGKVEEALNLVKR 357
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
V + V PN+ YN +I+ CK +EA+ + M G PN++TY+ +I C G
Sbjct: 358 VAE-FGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRG 416
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++D A + +M G K +V + S++ G C G A + ++ + P V +Y
Sbjct: 417 KLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYT 476
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++ G+C GK ++A+ L EM +G+ P++++F + L G + A+ L +M +
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEW 536
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG------------HNLDFT----- 438
+ PN V+YN +I G C +G M + ++ MI G H L T
Sbjct: 537 NVKPNRVTYNVMIEGYC-EEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 439 ------------------MYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ LL G+C EG +E + + +M
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDM 638
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 161/345 (46%), Gaps = 46/345 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+I+ Y + GN+ A + ++ IE G YSY L+ L A+ F + K
Sbjct: 548 MIEGYCEEGNMSKAFEFLNE--MIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENA-------------------------------KK 215
N ++ YT ++ G+C+ G +E A +K
Sbjct: 606 GNCELNEI-CYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 216 VFDVM-------TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
VF + +KP+ + Y +MI+ K G+ +EA + M+N GC PNE+TY A+I
Sbjct: 665 VFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV-VGKFDQAVGYLRNVMEANM 327
GLC G V+EA++L +KMR N T+ L L VG +AV L N + +
Sbjct: 725 NGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAV-ELHNAILKGL 783
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ +Y ++I GFC+ G+ +EA L+ M G+ P ++ + L ++ +AI
Sbjct: 784 LANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIE 843
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L M + P+ V+YNT+I G C+A G M +L + M+R G
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVA-GEMGKATELRNEMLRQG 887
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 140/279 (50%), Gaps = 4/279 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
P+V T + ++ G K A ++FD M ++P++ Y +I C+ +L AK+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +M GC N + YN +I GLC +V EA + + K +V T+ +++ GLC
Sbjct: 250 IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCK 309
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
V +F+ + + ++ +P + ++ G K GK +EA++L+K + G+ P +F
Sbjct: 310 VQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFV 369
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+NA+ L + D A LL +M ++ PN V+Y+ +I C +G++ + M
Sbjct: 370 YNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFC-RRGKLDTALSFLGEM 428
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
I G Y+ L+ G+C+ G++ + EM+ KK
Sbjct: 429 IDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKK 467
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 6/208 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y S++ + K A + ++ E VP +V TYT +I G CK G + A+ + M
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV-TYTAVINGLCKAGFVNEAEILCSKM 743
Query: 221 TVK---PNLLAYNTMINGFCKK-GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
PN + Y ++ K G++++A + N ++ +G N TYN +I G C GR
Sbjct: 744 RPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGR 802
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EA L+ +M +G + T+ +M+ LC +A+ ++ E + PD +Y
Sbjct: 803 MEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKP 364
+I+G C G+ +A L EM +GLKP
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLKP 890
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 14/256 (5%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQA 149
CY + D L H + LLK + K D + +I A G+ K A F
Sbjct: 649 CYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA---FGIW 705
Query: 150 KQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ N C+ +Y +++ L + + AE ++ N VP V TY + K
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQV-TYGCFLDILTK 764
Query: 207 -MGMIENAKKVFDVM--TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+G ++ A ++ + + + N YN +I GFC++G +EEA + + M+ G P+ +T
Sbjct: 765 GVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCIT 824
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y MI LC V +A L M G + + + +++ G CV G+ +A ++
Sbjct: 825 YTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Query: 324 EANMNPDVKSYEVVIN 339
+ P+ ++ E I+
Sbjct: 885 RQGLKPNTETSETTIS 900
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 146/281 (51%), Gaps = 5/281 (1%)
Query: 191 PPDVSTYTTMIRGYCKM---GMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK 247
PP + + ++ KM + + D V PN+ N +IN FC + A
Sbjct: 42 PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFS 101
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ +++ G +P+ T+ +I GLC+ G++ EA L KM GF+ NV T+ +++ GLC
Sbjct: 102 VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 161
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
VG A+ LR++ + N PDV Y +I+ CK + EA +L +M +G+ P +F
Sbjct: 162 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 221
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++ ++ L E LL QM LP+ V ++T++ LC +G++ + ++VD
Sbjct: 222 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC-KEGKVTEAHEIVDM 280
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
MI+ G D Y+ L+ G+C + ++ +++ +M+ +KG
Sbjct: 281 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV-FDMMVRKG 320
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 130/254 (51%), Gaps = 4/254 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ N L+ +N + A +I+K PD +T+TT+IRG C G I A +F
Sbjct: 80 VYTLNILINSFCHLNRVGFAFSVLAKILKLGH-QPDPTTFTTLIRGLCVEGKIGEALHLF 138
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +PN++ Y T+ING CK G A + + M C+P+ + Y ++I LC +
Sbjct: 139 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 198
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+V EA L ++M G ++ T+ S++ LC + ++ L ++ + + PDV +
Sbjct: 199 RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 258
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V++ CK GK EA ++ M RG++P V ++ + E+D A+ + M +
Sbjct: 259 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 318
Query: 395 MDCLPNFVSYNTII 408
P+ +SY T+I
Sbjct: 319 KGFAPDVISYTTLI 332
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 140/315 (44%), Gaps = 57/315 (18%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI GN AAI + +E G C + Y S++ L + + A F Q+V
Sbjct: 156 LINGLCKVGNTSAAIRLL---RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 212
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ + PD+ TYT+++ C + ++ + + M + P+++ ++T+++ CK+G++
Sbjct: 213 GQG-ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKV 271
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA + ++ M+ RG P+ +TY ++ G C+ +DEA + M GF
Sbjct: 272 TEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA--------- 322
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS----DEAISLLKEMR 358
PDV SY +IN K G E I L+KE
Sbjct: 323 --------------------------PDVISYTTLINAGKKDGGGLVSLQEVIGLVKE-- 354
Query: 359 ARGLKPTVFSFNAVFRILVENGEL-DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
P AV I + +L ++ LL +M +PN V ++T++ LC +G+
Sbjct: 355 ----TPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALC-KEGK 409
Query: 418 MQDVEDLVDRMIRSG 432
+ + D+VD MI+ G
Sbjct: 410 VMEAHDVVDMMIKRG 424
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 38/172 (22%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+++++ L + + A E +++ V PDV TYTT++ G+C ++ A KVFD+M
Sbjct: 258 FSTVVDALCKEGKVTEAHEIVDMMIQRGV-EPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 316
Query: 221 TVK---PNLLAYNTMINGFCKKGE----------------------------------LE 243
K P++++Y T+IN K G E
Sbjct: 317 VRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFE 376
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
+ + +NEM+N PN + ++ ++ LC G+V EA ++ M G + N
Sbjct: 377 KGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPN 428
>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 207/442 (46%), Gaps = 34/442 (7%)
Query: 58 VTKVIYEQTNPYHALFFFNWASN-PNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
V+++I +Q + AL +F WAS PN + H+ Y A+ L + LL
Sbjct: 39 VSQLILDQKSASEALEYFRWASTVPN-----FVHSQSTYRALIHKLCTFRRFDTVKQLLD 93
Query: 117 ------NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVR 170
+ D FI+ +I+ G + I + L +NS+L VLV+
Sbjct: 94 EMPHSLGAPPGDDIFIT-IIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVK 152
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLL 227
I +A EF+ + + + V D T+ +++G C I K+ ++ V PN +
Sbjct: 153 -EDIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTV 211
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YNT+++ C+ G++ A+ MNEM + PN++T+N +I G C G +A +L+ K
Sbjct: 212 VYNTLLHALCRNGKVGRARNLMNEMED----PNDVTFNILISGYCKEGNSVQALVLLEKS 267
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
GF +V + +L+ LC G+ +A L V DV +Y +I GFC GK
Sbjct: 268 FSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKV 327
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
+ LK+M +G P V ++N + E+G LD A+ L M NFV+++T+
Sbjct: 328 KVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTL 387
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRS--GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
I GLC ++ R++D +++ M S G + Y+ ++ G ++ + + E +T
Sbjct: 388 IRGLC-SEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDE----SAEFLT 442
Query: 466 KKGRLLKLKNFLTRVVDALLLM 487
K G N R VD L++
Sbjct: 443 KMG------NLFPRAVDRSLMI 458
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 173/380 (45%), Gaps = 9/380 (2%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQ 151
T Y + L + + A +L+ +D + LI Y GN A+ ++
Sbjct: 210 TVVYNTLLHALCRNGKVGRARNLMNEMEDPNDVTFNILISGYCKEGNSVQALVLLEKSFS 269
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
+ + S +L +L A E ++ + DV Y T+I+G+C G ++
Sbjct: 270 MGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLL-DVVAYNTLIKGFCGAGKVK 328
Query: 212 NAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
M K PN+ YN +I+GF + G L+ A N+M G + N +T++ +I
Sbjct: 329 VGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLI 388
Query: 269 YGLCINGRVDEAKMLMAKMRLN--GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
GLC R+++ ++ M + G + ++S + S++ GL FD++ +L + N
Sbjct: 389 RGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKM--GN 446
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P ++I CK G ++A + +M G P++ +N + + G + A+
Sbjct: 447 LFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAV 506
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+ +M +C P ++N +I G C +G+++ LV+ + G + YS L+
Sbjct: 507 ELMNEMIANNCFPIPSTFNAVITGFC-RQGKVESALKLVEDITARGCVPNTETYSPLIDV 565
Query: 447 YCEEGNVENVMQIAHEMVTK 466
C G+++ MQ+ +MV K
Sbjct: 566 LCRNGDLQKAMQVFMQMVDK 585
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 145/295 (49%), Gaps = 14/295 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LIK + G VK + H KQ+EN CL +YN L+ + LA + F+ +
Sbjct: 317 LIKGFCGAGKVKVGL---HFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDM- 372
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-----VKPNLLAYNTMINGFCKKG 240
K + + + T+ T+IRG C IE+ + ++M + ++ YN++I G KK
Sbjct: 373 KTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKN 432
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+E+ + + +M N P + + MI C G +++AK + +M G ++ +
Sbjct: 433 GFDESAEFLTKMGN--LFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYN 490
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ G G +AV + ++ N P ++ VI GFC+ GK + A+ L++++ AR
Sbjct: 491 CLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITAR 550
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
G P +++ + +L NG+L +A+ + QM LP+ +N+++ L +
Sbjct: 551 GCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQER 605
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 9/296 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ +K+ F Q+ + +P +V TY +I G+ + GM++ A +F+
Sbjct: 313 AYNTLIKGFCGAGKVKVGLHFLKQMENKGCLP-NVDTYNVLISGFSESGMLDLALDLFND 371
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMN--EMMNRGCRPNELTYNAMIYGLCIN 274
M +K N + ++T+I G C + +E+ + E G R + YN++IYGL
Sbjct: 372 MKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKK 431
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
DE+ + KM N F V +L+ C G + A +++ P + Y
Sbjct: 432 NGFDESAEFLTKMG-NLFPRAVDRSLMILEH-CKKGAIEDAKRVYDQMIDEGGIPSILVY 489
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++GF K G EA+ L+ EM A P +FNAV G+++ A+ L++ +
Sbjct: 490 NCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITA 549
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
C+PN +Y+ +I LC G +Q + +M+ G D +++ LL +E
Sbjct: 550 RGCVPNTETYSPLIDVLC-RNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQE 604
>gi|125539402|gb|EAY85797.1| hypothetical protein OsI_07159 [Oryza sativa Indica Group]
Length = 506
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 161/310 (51%), Gaps = 7/310 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENG---ACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LIK Y +G++ A F + + + L +Y++L+G L R +K A E F ++
Sbjct: 198 LIKYYVKKGDLGTAFQVFDEMRNMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFEDMI 257
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGEL 242
+++ + PD TY +I G+C++G +E A+ +F M +PN Y T+ING CKKGE+
Sbjct: 258 EKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEV 317
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E A+ EM+ G +P+ ++Y +++ LC +G VDE L+ +M G K +V T+ +
Sbjct: 318 EAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLL 377
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
L+GLC + +AV L + + +V SY +V+N C G+ ++A LL M RG
Sbjct: 378 LEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGF 437
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P + N + L + G + A + L + +P + +I + + + +E
Sbjct: 438 VPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIESVFRERKLRRSIE 497
Query: 423 DLVDRMIRSG 432
L+D +I G
Sbjct: 498 -LLDVLIAEG 506
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 146/280 (52%), Gaps = 8/280 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM------TVKPNLLAYNTMINGFCKKGELEEA 245
P+ Y +I+ Y K G + A +VFD M V+P+L+ Y+T+I G C+ +++EA
Sbjct: 190 PNTCIYNILIKYYVKKGDLGTAFQVFDEMRNMNCADVRPSLVTYSTLIGGLCRGAQMKEA 249
Query: 246 KKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ +M+ + P++LTYN +I G C G+V++A+ + MR N + N + +++
Sbjct: 250 FELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLIN 309
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C G+ + A G ++ + + PD SY ++ C+ G DE I+L++EM +G K
Sbjct: 310 GHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKA 369
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
V ++N + L ++ + A+ LL+++P N SY ++ LC + G M+ L
Sbjct: 370 DVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLC-SCGEMEKAAGL 428
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ M+ G + + LL G C+ G V + + +V
Sbjct: 429 LGMMLGRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLV 468
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 160/312 (51%), Gaps = 7/312 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
YN L+ V+ + A + F ++ N V P + TY+T+I G C+ ++ A ++F+
Sbjct: 195 YNILIKYYVKKGDLGTAFQVFDEMRNMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFE 254
Query: 219 VMTVK----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P+ L YN +I GFC+ G++E+A+ M C PN Y +I G C
Sbjct: 255 DMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKK 314
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G V+ A+ + +M +G + + ++ S++ LC G D+ + ++ + + DV +Y
Sbjct: 315 GEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTY 374
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++ G CK + EA++LL+++ + G++ V S+ V L GE+++A LL M
Sbjct: 375 NLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLG 434
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+P++ + N ++ GLC GR+ D + ++ +G + ++ L++ E +
Sbjct: 435 RGFVPHYAASNMLLIGLCDV-GRVSDATVTLYGLVDTGFMPEARCWARLIESVFRERKLR 493
Query: 455 NVMQIAHEMVTK 466
+++ ++ +
Sbjct: 494 RSIELLDVLIAE 505
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 126/248 (50%), Gaps = 5/248 (2%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC---RPNELTYNAMIYGLCINGRVDE 279
+PN YN +I + KKG+L A + +EM N C RP+ +TY+ +I GLC ++ E
Sbjct: 189 QPNTCIYNILIKYYVKKGDLGTAFQVFDEMRNMNCADVRPSLVTYSTLIGGLCRGAQMKE 248
Query: 280 AKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
A L M + + T+ ++ G C +G+ ++A + + P+ +Y +I
Sbjct: 249 AFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLI 308
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG CK G+ + A + +EM G++P S+ ++ L +G +D I L+++M Q C
Sbjct: 309 NGHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCK 368
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
+ V+YN ++ GLC + R+ + L++++ G L+ Y ++ C G +E
Sbjct: 369 ADVVTYNLLLEGLCKDR-RIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAG 427
Query: 459 IAHEMVTK 466
+ M+ +
Sbjct: 428 LLGMMLGR 435
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 173/330 (52%), Gaps = 5/330 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G+ A+ + ++ A +++Y++++ L R I A F ++ + + V T
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI-KSSVVT 265
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y +++RG CK G + + M + PN++ +N +++ F K+G+L+EA + EM+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG PN +TYN ++ G C+ R+ EA ++ M N ++ T S++KG C+V + D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ RN+ + + + +Y +++ GFC+ GK A L +EM + G+ P V ++ +
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L +NG+L++A+ + + + + V Y TII G+C G+++D +L + G
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG-GKVEDAWNLFCSLPCKGV 504
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ Y+ ++ G C++G++ + +M
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 168/322 (52%), Gaps = 8/322 (2%)
Query: 150 KQIE-NGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
KQ+E NG +Y+ N ++ R A +++K PD +T+ T+I+G
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTLIKGLFL 170
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G + A + D M +P+++ YN+++NG C+ G+ A + +M R + + T
Sbjct: 171 EGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFT 230
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y+ +I LC +G +D A L +M G K +V T+ S+++GLC GK++ L++++
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ P+V ++ V+++ F K GK EA L KEM RG+ P + ++N + L
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A +L M + C P+ V++ ++I G CM K R+ D + + + G + YS L
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK-RVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 444 LKGYCEEGNVENVMQIAHEMVT 465
++G+C+ G ++ ++ EMV+
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVS 431
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 157/293 (53%), Gaps = 3/293 (1%)
Query: 177 AEEFFHQIVKENVVPP--DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMIN 234
A F ++++ +P D S + + I + ++ + K ++ + N+ N MIN
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
FC+ + A + ++M G P+ T+N +I GL + G+V EA +L+ +M NG +
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+V T+ S++ G+C G A+ LR + E N+ DV +Y +I+ C+ G D AISL
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
KEM +G+K +V ++N++ R L + G+ + LLLK M + +PN +++N ++ + +
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL-DVFVK 310
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+G++Q+ +L MI G + + Y+ L+ GYC + + + MV K
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 185/376 (49%), Gaps = 9/376 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y +I + + S+A LL+ N +D F S +I + G + AAI F + +
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +YNSL+ L + +V +V P+V T+ ++ + K G +
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV-PNVITFNVLLDVFVKEGKL 314
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A +++ M + PN++ YNT+++G+C + L EA ++ M+ C P+ +T+ ++
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C+ RVD+ + + G N T+ +++G C GK A + ++ +
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PDV +Y ++++G C GK ++A+ + ++++ + + + + + + G+++ A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L +P PN ++Y +I GLC KG + + L+ +M G+ + Y+ L++ +
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLC-KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 448 CEEGNVENVMQIAHEM 463
+G++ ++ EM
Sbjct: 554 LRDGDLTASAKLIEEM 569
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 166/349 (47%), Gaps = 9/349 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ I D L I A SL K K S + L++ G
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
E + ++N LL V V+ ++ A E + +++ + P++ TY T++ GYC +
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI-SPNIITYNTLMDGYCMQNRL 349
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A + D+M P+++ + ++I G+C +++ K + RG N +TY+ +
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ G C +G++ A+ L +M +G +V T+ +L GLC GK ++A+ ++ ++ M
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ + Y +I G CK GK ++A +L + +G+KP V ++ + L + G L A +
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
LL++M + PN +YNT+I + G + L++ M G + D
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAH-LRDGDLTASAKLIEEMKSCGFSAD 577
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 117/233 (50%), Gaps = 5/233 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++ SL+ V + + F I K +V V TY+ +++G+C+ G I+ A+++F
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV-TYSILVQGFCQSGKIKLAEELF 426
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V P+++ Y +++G C G+LE+A + ++ + Y +I G+C
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+V++A L + G K NV T+ M+ GLC G +A LR + E P+ +Y
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L++EM++ G S V +L+ +GELD++ L
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDKSFL 598
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 38/154 (24%)
Query: 346 KSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP----------- 393
K D+AI+L +EM R+R L P++ F+ F + + + + KQ+
Sbjct: 68 KKDDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 394 --QMDCL----------------------PNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
++C P+ ++NT+I GL + +G++ + LVDRM+
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFL-EGKVSEAVVLVDRMV 185
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+G D Y+ ++ G C G+ + + +M
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 149/280 (53%), Gaps = 8/280 (2%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAK 246
V DV TY T+IRG C ++ A ++ M ++PN++ Y++++ G+CK G E+
Sbjct: 146 VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVG 205
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
K EM +G P+ + Y +I LC G+ +A +M M G + NV T+ ++ +
Sbjct: 206 KVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCM 265
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG---LK 363
C G +A+G L+ + E + PDV +Y +I G + + DEA+ LL+EM RG +K
Sbjct: 266 CKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM-VRGKNIVK 324
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V +FN+V + L + G + +A + M + C+ N V+YN +I GL +++ +
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH-KVRKAME 383
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L+D M G D YS L+KG+C+ V+ + M
Sbjct: 384 LMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM 423
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 203/467 (43%), Gaps = 89/467 (19%)
Query: 80 NPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN---SNKLSDFFI-SKLIKAYGD 135
+P PN YT + L + L A LL++ + +D LI+ D
Sbjct: 108 HPACRPNAVS-----YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCD 162
Query: 136 RGNVKAAIFWFHQ--AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
V A+ + IE +YS SLL + + + F ++ E + PD
Sbjct: 163 AAEVDKAVELMGEMCESGIEPNVVVYS--SLLQGYCKSGRWEDVGKVFVEM-SEKGIEPD 219
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMN 250
V YT +I CK+G + A V D+M ++PN++ YN +IN CK+G ++EA +
Sbjct: 220 VVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLK 279
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM--RLNGFKDNVSTHKSMLKGLCV 308
+M +G P+ +TYN +I GL +DEA L+ +M N K NV T S+++GLC
Sbjct: 280 KMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCD 339
Query: 309 VGKFDQA----------------------------VGYLRNVMEA-------NMNPDVKS 333
+G+ QA V +R ME + PD +
Sbjct: 340 IGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFT 399
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y ++I GFCK+ + D A LL MR RG++P +F + + + E G ++RA L +M
Sbjct: 400 YSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD 459
Query: 394 QMDCLPNFVSYNTIICGLCMA----------------------------------KGRMQ 419
L + V+Y+T+I G C A G M+
Sbjct: 460 NNFPL-DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDME 518
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ +M SG D ++ L++GY +G + V+++ EM+TK
Sbjct: 519 AANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITK 565
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 151/293 (51%), Gaps = 12/293 (4%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTV------KPNLLAYNTMINGFCKKGELEEAK 246
D +Y T++ C+ G + A + M++ +PN ++Y ++ C ++A
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ M + G R + +TY +I GLC VD+A LM +M +G + NV + S+L+G
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+++ + E + PDV Y +I+ CK+GK+ +A ++ M RGL+P V
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++N + + + G + AI +LK+M + P+ V+YNT+I GL M + L++
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVL-EMDEAMWLLE 314
Query: 427 RMIRSGHNL---DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
M+R G N+ + ++ +++G C+ G + Q+ M+ + G ++ L +
Sbjct: 315 EMVR-GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV-RAMMEETGCMVNLVTY 365
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 163/319 (51%), Gaps = 6/319 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK-E 187
LI G+VK AI + + + +YN+L+ L V + A ++V+ +
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGK 320
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEE 244
N+V P+V T+ ++I+G C +G + A +V +M NL+ YN +I G + ++ +
Sbjct: 321 NIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRK 380
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + M+EM + G P+ TY+ +I G C +VD A+ L++ MR G + + + +L
Sbjct: 381 AMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLV 440
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
+C G ++A L N M+ N DV +Y +I+G CK G A LLK + GL P
Sbjct: 441 AMCEQGMMERARN-LFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTP 499
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+++ V + ++G+++ A +LKQM LP+ ++++I G KG + V +L
Sbjct: 500 DAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS-TKGEINKVLEL 558
Query: 425 VDRMIRSGHNLDFTMYSCL 443
+ MI LD + S L
Sbjct: 559 IREMITKNIALDSKIISTL 577
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 151/303 (49%), Gaps = 13/303 (4%)
Query: 213 AKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM---NRGCRPNELTYNAMIY 269
A + D + + ++YNT++ C++G + A + M + CRPN ++Y ++
Sbjct: 64 ATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMR 123
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
LC + D+A L+ MR G + +V T+ ++++GLC + D+AV + + E+ + P
Sbjct: 124 ALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEP 183
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+V Y ++ G+CK G+ ++ + EM +G++P V + + L + G+ +A ++
Sbjct: 184 NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 243
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
M + PN V+YN +I +C +G +++ ++ +M G D Y+ L+KG +
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMC-KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSD 302
Query: 450 EGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVVIM 509
++ M + EMV +G+ + N +T ++ G I R QV +M
Sbjct: 303 VLEMDEAMWLLEEMV--RGKNIVKPNVVT-------FNSVIQGLCDIGRMRQAFQVRAMM 353
Query: 510 ERT 512
E T
Sbjct: 354 EET 356
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 148/319 (46%), Gaps = 47/319 (14%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
N++ + ++ + A+ S P+ + T ++DVL + + ++
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNT-LIKGLSDVLEMDEAMWLLEEMV 317
Query: 116 KNSNKLSDFFIS--KLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVR 170
+ N + ++ +I+ D G ++ A F +E C L +YN L+G L+R
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQA---FQVRAMMEETGCMVNLVTYNLLIGGLLR 374
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM----------------------- 207
V+ ++ A E ++ + PD TY+ +I+G+CKM
Sbjct: 375 VHKVRKAMELMDEMTSLGL-EPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433
Query: 208 ------------GMIENAKKVFDVM--TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
GM+E A+ +F+ M +++AY+TMI+G CK G+L+ AK+ + ++
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+ G P+ +TY+ +I +G ++ A ++ +M +GF +V+ S+++G G+ +
Sbjct: 494 DEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEIN 553
Query: 314 QAVGYLRNVMEANMNPDVK 332
+ + +R ++ N+ D K
Sbjct: 554 KVLELIREMITKNIALDSK 572
>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y++++ L R ++ A F + + + P V ++ +++ GYCK+G ++ AK F
Sbjct: 188 HTYSTVVDGLCRQQKLEDAVLFL-RTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 246
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ + P++ ++N +ING C G + EA + ++M G P+ +TYN + G + G
Sbjct: 247 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 306
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD-VKSY 334
+ A ++ M G +V T+ +L G C +G D + L++++ + +
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+++G CK G+ DEA+SL +M+A GL P + +++ V L + G+ D A+ L +M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
LPN ++ ++ GLC KG + + L+D +I SG LD +Y+ ++ GY + G +E
Sbjct: 427 KRILPNSRTHGALLLGLCQ-KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 455 NVMQI 459
+++
Sbjct: 486 EALEL 490
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 136/282 (48%), Gaps = 5/282 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP----NLLAYNTMINGFCKKGELEEA 245
+ PDV TYT ++ G C++G I+ + M + +++ + M++G CK G ++EA
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
N+M G P+ + Y+ +I+GLC G+ D A L +M N TH ++L G
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G +A L +++ + D+ Y +VI+G+ K G +EA+ L K + G+ P+
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V +FN++ + + A +L + P+ VSY T++ G + +++L
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC-GNTKSIDELR 561
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
M G YS + KG C EN + E + +K
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 168/346 (48%), Gaps = 19/346 (5%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G + A+ F+Q K L +Y+ ++ L ++ +A + ++ + ++P + T
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP-NSRT 435
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ ++ G C+ GM+ A+ + D + +++ YN +I+G+ K G +EEA + ++
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G P+ T+N++IYG C + EA+ ++ ++L G +V ++ +++ G
Sbjct: 496 ETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN-T 554
Query: 314 QAVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKE------------MRAR 360
+++ LR M+A + P +Y V+ G C+ K + +L+E M +
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+ P ++N + + L L A + L+ M + + +YN +I LC+ G ++
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY-GYIRK 673
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + + +L Y+ L+K +C +G+ E +++ H+++ +
Sbjct: 674 ADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 719
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 125/267 (46%), Gaps = 16/267 (5%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ + I+ A E F ++V E + P V+T+ ++I GYCK I A+K+ DV+
Sbjct: 471 YNIVIDGYAKSGCIEEALELF-KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC----- 272
+ P++++Y T+++ + G + + EM G P +TY+ + GLC
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 589
Query: 273 ------INGRV-DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+ R+ ++ K + M G + T+ ++++ LC V A +L +
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
N++ +Y ++I+ C G +A S + ++ + + + F++ + + G+ + A
Sbjct: 650 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLC 412
+ L Q+ + Y+ +I LC
Sbjct: 710 VKLFHQLLHRGFNVSIRDYSAVINRLC 736
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 116/237 (48%), Gaps = 9/237 (3%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+YN+++ F + ++ + K + + NE TY+ ++ GLC ++++A + +
Sbjct: 161 SYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTS 213
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+V + S++ G C +G D A + V++ + P V S+ ++ING C +G
Sbjct: 214 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
EA+ L +M G++P ++N + + G + A +++ M P+ ++Y +
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM-YSCLLKGYCEEGNVENVMQIAHEM 463
+CG C G + L+ M+ G L+ + S +L G C+ G ++ + + ++M
Sbjct: 334 LCGQCQL-GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N T+ +++ GLC K + AV +LR ++ P V S+ +++G+CK+G D A S
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG---L 411
+ GL P+V+S N + L G + A+ L M + P+ V+YN + G L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M G + + D++D+ G + D Y+ LL G C+ GN++ + + +M+++
Sbjct: 306 GMISGAWEVIRDMLDK----GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 16/199 (8%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
SY +L+ + K +E ++ E + P +V TY+ + +G C+ EN V
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV-TYSVIFKGLCRGWKHENCNHVLRE 598
Query: 218 -------------DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
+ + P+ + YNT+I C+ L A + M +R + TY
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I LC+ G + +A + ++ + + +++K CV G + AV ++
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 718
Query: 325 ANMNPDVKSYEVVINGFCK 343
N ++ Y VIN C+
Sbjct: 719 RGFNVSIRDYSAVINRLCR 737
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 146/279 (52%), Gaps = 5/279 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+ +L+ + R+ +LA ++ VP DV T +++RGYC G I+ +K+F +M
Sbjct: 113 FTTLIDGVCRIGKTELAAGLLKEMGLVGCVP-DVVTCNSLMRGYCSQGKIDKVRKIFHLM 171
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+KP++ +Y+ ING+CK +++EA + +EM +RG PN +TYN +I LC R
Sbjct: 172 VSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRP 231
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A++L KM G ++ + ++L G C G D+ + + + + PD+ Y ++
Sbjct: 232 RDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTII 291
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
ING C+ K +A +L + GLKP V ++ A+ L G + A+ L ++M + C
Sbjct: 292 INGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGC 351
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+P SYN ++ G C+ V L+ M G D
Sbjct: 352 MPGSCSYNVLLQG-CLQHNDTSTVVQLIHEMADRGFYAD 389
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 167/330 (50%), Gaps = 5/330 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
GN+ A+ F++ + +N LL +VR+ + F ++ + + +V T
Sbjct: 19 GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEM-EFRGIKYNVCT 77
Query: 197 YTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ +I +C + ++ VF KP+++ + T+I+G C+ G+ E A + EM
Sbjct: 78 LSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMG 137
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
GC P+ +T N+++ G C G++D+ + + M G K +V ++ + G C V K D
Sbjct: 138 LVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKID 197
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ + + P+ +Y +I C+ + +A L ++M A GL P + +++ +
Sbjct: 198 EAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLL 257
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+ G LD ++L ++M + P+ V Y II G+C ++ +++D ++++ R+I G
Sbjct: 258 DGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSR-KVKDAKEVLSRLIVEGL 316
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D Y+ L+ G C EG++ +++ +M
Sbjct: 317 KPDVHTYTALVDGLCREGSIIEALRLFRKM 346
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ + +GN+ + F + ++ L Y ++ + R +K A+E +++
Sbjct: 254 STLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIV 313
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
E + PDV TYT ++ G C+ G I A ++F M P +YN ++ G + +
Sbjct: 314 EGL-KPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTS 372
Query: 244 EAKKCMNEMMNRGCRPNELT 263
+ ++EM +RG + +T
Sbjct: 373 TVVQLIHEMADRGFYADAVT 392
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 169/340 (49%), Gaps = 5/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + R + A+ + ++ + + +SLL I A Q+V E
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-EM 109
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
PD T+TT+I G A + D M +PNL+ Y ++NG CK+G+++ A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+N+M + + +N +I LC VD+A L +M G + NV T+ S++
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G++ A L +++E +NP++ ++ +I+ F K GK EA L +M R + P
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+F++N++ + LD+A + + M DC P+ +YNT+I G C +K R++D +L
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK-RVEDGTELF 348
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
M G D Y+ L++G +G+ +N ++ +MV+
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 138/254 (54%), Gaps = 4/254 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++N+L+ V+ AE+ ++K ++ PD+ TY ++I G+C ++ AK++F
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI-DPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K P+L YNT+I GFCK +E+ + EM +RG + +TY +I GL +
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A+ + +M +G ++ T+ +L GLC GK ++A+ + ++ + D+ Y
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G CK GK D+ L + +G+KP V ++N + L L A LLK+M +
Sbjct: 434 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Query: 395 MDCLPNFVSYNTII 408
LP+ +YNT+I
Sbjct: 494 DGPLPDSGTYNTLI 507
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 158/307 (51%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L A + ++ E + P++ T+ +I + K G A+K+ D
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ P++ YN++INGFC L++AK+ M+++ C P+ TYN +I G C + R
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L +M G + T+ ++++GL G D A + ++ + PD+ +Y +
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G C GK ++A+ + M+ +K ++ + + + + G++D L +
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V+YNT+I GLC +K +Q+ L+ +M G D Y+ L++ + +G+
Sbjct: 461 VKPNVVTYNTMISGLC-SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 519
Query: 457 MQIAHEM 463
++ EM
Sbjct: 520 AELIREM 526
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 157/301 (52%), Gaps = 5/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y ++ L + I LA +++ + + DV + T+I CK +++A +F
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++PN++ Y+++I+ C G +A + +++M+ + PN +T+NA+I
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+ EA+ L M ++ T+ S++ G C+ + D+A ++ + PD+ +Y
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I GFCK + ++ L +EM RGL ++ + + L +G+ D A + KQM
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ ++Y+ ++ GLC G+++ ++ D M +S LD +Y+ +++G C+ G V+
Sbjct: 389 DGVPPDIMTYSILLDGLC-NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 455 N 455
+
Sbjct: 448 D 448
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 158/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++ +N LL + ++ L ++ + + ++ TY +I +C+ I A +
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI-SHNLYTYNILINCFCRRSQISLALALL 68
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M +P+++ ++++NG+C + +A +++M+ G RP+ +T+ +I+GL ++
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+ EA L+ +M G + N+ T+ ++ GLC G D A L + A + DV +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+ CK D+A++L KEM +G++P V +++++ L G A LL M +
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN V++N +I + +G+ + E L D MI+ + D Y+ L+ G+C ++
Sbjct: 249 KKINPNLVTFNALIDAF-VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 455 NVMQIAHEMVTK 466
Q+ MV+K
Sbjct: 308 KAKQMFEFMVSK 319
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 5/233 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN+L+ + ++ E F ++ +V D TYTT+I+G G +NA+KVF
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V P+++ Y+ +++G C G+LE+A + + M + + Y MI G+C
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+VD+ L + L G K NV T+ +M+ GLC +A L+ + E PD +Y
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L++EMR+ + V +L +G LD++ L
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKSFL 555
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L + + KFD + + ++ ++ +Y ++IN FC+ + A++LL +M G
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+P++ + +++ + A+ L+ QM +M P+ +++ T+I GL + + V
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
LVDRM++ G + Y ++ G C+ G+++ + ++M K
Sbjct: 136 A-LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 166/343 (48%), Gaps = 6/343 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+++ + +G + F + ++ + +Y + + L + +K A ++V +
Sbjct: 226 IVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKG 285
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF----DVMTVKPNLLAYNTMINGFCKKGELEE 244
+ P+V T+T++I G CK+G E A ++F + KPN+ Y MI G+CK+G+L
Sbjct: 286 L-KPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLAR 344
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A+ + M+ +G PN TY +I G C G + A LM KMR GF+ N+ T+ +++
Sbjct: 345 AEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALID 404
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC GK +A LR + D +Y V+I CK G A+ L M G P
Sbjct: 405 GLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHP 464
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ ++ + + +++ + L + ++ +P +Y ++I G C G+ +
Sbjct: 465 DIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKV-GKSTSALRV 523
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+RM+++G D Y L+ G C+E +E + M+ K+
Sbjct: 524 FERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKR 566
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 165/343 (48%), Gaps = 5/343 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ +++ A+ + G + A + + C+ + N +L + S A + F +V
Sbjct: 117 MRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMV 176
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNT---MINGFCKKGEL 242
+ PD ++ +I G C+ G +E + VM + L T ++ FC+KG
Sbjct: 177 TRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRF 236
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ + M+ G PN + Y A I GLC V +A ++ +M G K NV TH S+
Sbjct: 237 RDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSL 296
Query: 303 LKGLCVVGKFDQAVG-YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+ GLC +G ++A +L+ + ++ P+V +Y V+I G+CK GK A LL M +G
Sbjct: 297 INGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG 356
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L P ++ + + G + A L+ +M + PN +YN +I GLC KG++Q+
Sbjct: 357 LAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLC-KKGKIQEA 415
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
++ G LD Y+ ++ +C++G++ + + + M
Sbjct: 416 YKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMA 458
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 150/301 (49%), Gaps = 7/301 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y ++G + + AE ++V++ + P + +TYTT+I G+CK G A ++
Sbjct: 326 VHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP-NTNTYTTLISGHCKEGSFNCAFELM 384
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +PN+ YN +I+G CKKG+++EA K + N+G + +++TY MI C
Sbjct: 385 NKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQ 444
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + A L +M NG ++ T+ +++ C + +++ + + P ++Y
Sbjct: 445 GHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTY 504
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G+CK+GKS A+ + + M G + ++ A+ L + L+ A L + M
Sbjct: 505 TSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLD 564
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM--IRSGHNLDFTMYSCLLKGYCEEGN 452
+P V+ T+ C + + V ++DR+ R H ++ + G+ E+ +
Sbjct: 565 KRLVPCEVTPVTLAFEYCRREKAVVAV-SILDRLDKRRKNHTVNVLVRKLSAIGHVEDAS 623
Query: 453 V 453
+
Sbjct: 624 L 624
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 91/243 (37%), Gaps = 60/243 (24%)
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y T F +G L A +E M R M+ GR+ EA ++ +MR
Sbjct: 97 YVTAATTFVDRGSLPMA----HEAMRR-----------MVAAFAEAGRLPEAADMVFEMR 141
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-----NMNPDVKSYEVVINGFCK 343
+G V T +L+ G F Y R V + + PD +S+ +I G C+
Sbjct: 142 SHGLPFCVETANWVLRAGLDTGSF----AYARKVFDGMVTRGGLLPDARSFRALIVGCCR 197
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+ +E +LL M+ +G CL N
Sbjct: 198 DGRMEEVDALLTVMQGQGF----------------------------------CLDNATC 223
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
T+I + KGR +DV +L RM+ G + Y+ + G C+ V+ + EM
Sbjct: 224 --TVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEM 281
Query: 464 VTK 466
V K
Sbjct: 282 VAK 284
>gi|302763707|ref|XP_002965275.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
gi|300167508|gb|EFJ34113.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
Length = 445
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 167/357 (46%), Gaps = 43/357 (12%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
V + M++G+ + +++ AK M KPN ++YNT+I+ C G ++EA++ + M
Sbjct: 51 VVLHNLMLKGFSEARLVDEAKSHLHRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMA 110
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG PN +TYNAM GL G +DEA LM M GF T +++ LC GK D
Sbjct: 111 KRGVAPNRVTYNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGKPD 170
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A + ++ N+ P++ + ++++ FCK + +EA+ + M G PT+ +FNA+
Sbjct: 171 EACKVMETMLLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALL 230
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSY----------------------------- 404
+ ++D A LL+ M + C PNFV+Y
Sbjct: 231 ELFCNTDQMDSAAELLETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYA 290
Query: 405 -NTIIC-----GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
N ++C GLC G M + M G + Y+ L++G+C+ G ++ +
Sbjct: 291 PNLLVCNAYVAGLC-KTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAER 349
Query: 459 IAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVVIMERTVED 515
+ EM+ +G L + ++L+ + + G + F+ + QV +E D
Sbjct: 350 VLEEMIA-EGSLPDSTTY------SVLIQGLCSAGQIVHAFMVMLQVTRAVESARPD 399
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 143/297 (48%), Gaps = 5/297 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN+L+ L I+ A E + K V P V TY M G K G+++ A ++ V
Sbjct: 85 SYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRV-TYNAMATGLGKAGLLDEAFELMGV 143
Query: 220 MTVKPNLLA---YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M L +N ++ CK G+ +EA K M M+ R PN LT N +++ C R
Sbjct: 144 MESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNILTLNLILHAFCKAAR 203
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+EA + M GF + T ++L+ C + D A L + + P+ +Y +
Sbjct: 204 PEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMARSKCKPNFVTYSI 263
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ F ++G+ EA + L+++ G P + NA L + GE+D A L M +
Sbjct: 264 MVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEG 323
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
C N +YN+++ G C GRM + E +++ MI G D T YS L++G C G +
Sbjct: 324 CRANTATYNSLVEGFC-KLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQI 379
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 123/244 (50%), Gaps = 6/244 (2%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+ P++ T ++ +CK E A + D+M P ++ +N ++ FC +++ A
Sbjct: 184 IEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAA 243
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + M C+PN +TY+ M+ GR+ EA+ + ++ + G+ N+ + + GL
Sbjct: 244 ELLETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGL 303
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+ D A +L + E + +Y ++ GFCK+G+ DEA +L+EM A G P
Sbjct: 304 CKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDS 363
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQM--DCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+++ + + L G++ A +++ Q+ + P+ ++ +I LC G M +
Sbjct: 364 TTYSVLIQGLCSAGQIVHAFMVMLQVTRAVESARPDPATFVKLIEKLC-ELGEMDRAALV 422
Query: 425 VDRM 428
++RM
Sbjct: 423 LERM 426
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 42/282 (14%)
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMR----------------LNGF----------- 292
+E TY +++G C+ G DEAK L+A+ + L GF
Sbjct: 13 SEFTYGTLVHGHCLAGEFDEAKRLVAEFKDTGMSPGSLVVLHNLMLKGFSEARLVDEAKS 72
Query: 293 -------KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
K N ++ +++ LC G+ +A L+ + + + P+ +Y + G K G
Sbjct: 73 HLHRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAG 132
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
DEA L+ M + G T +FN V L ++G+ D A +++ M + PN ++ N
Sbjct: 133 LLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNILTLN 192
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
I+ C A R ++ + D M+ G ++ LL+ +C +++ ++ M
Sbjct: 193 LILHAFCKA-ARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMAR 251
Query: 466 KKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVV 507
K + NF+T ++++ G + F+ Q+VV
Sbjct: 252 SKCK----PNFVTY---SIMVQKFAEMGRMVEARAFLEQLVV 286
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD--VKSYEVVING 340
++ + L F + T+ +++ G C+ G+FD+A + + M+P V + +++ G
Sbjct: 1 MLDRKTLGEFVHSEFTYGTLVHGHCLAGEFDEAKRLVAEFKDTGMSPGSLVVLHNLMLKG 60
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
F + DEA S L M KP S+N + L +G + A L+ M + PN
Sbjct: 61 FSEARLVDEAKSHLHRMDC---KPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPN 117
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+YN + GL A G + + +L+ M +G L ++ +++ C+ G + ++
Sbjct: 118 RVTYNAMATGLGKA-GLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVM 176
Query: 461 HEMVTK 466
M+ +
Sbjct: 177 ETMLLR 182
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 179/351 (50%), Gaps = 5/351 (1%)
Query: 116 KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK 175
K + KL + +IK + G + Q +++ + Y +L+ + I+
Sbjct: 144 KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 203
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTM 232
++ F+++ + +VV + TYT +I G+ KMG+ ++ ++++ M + PN+ YN+M
Sbjct: 204 RGKQLFYKMGELDVVA-NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSM 262
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
I C G+L A + +EM RG N +TYN +I GLC RV EA+ LM +M+ +G
Sbjct: 263 ICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGL 322
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
N+ ++ +++ G C +G D+A + + +P + +Y ++I GF + S
Sbjct: 323 SPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTD 382
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+++EM ARGL P+ ++ + LV + +++A + M + + + Y +I GLC
Sbjct: 383 MVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLC 442
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G M++ L + + +Y+ ++ GYC+EG+ +++ EM
Sbjct: 443 VV-GDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEM 492
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 146/288 (50%), Gaps = 10/288 (3%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G + A F + ++ + +YN+L+G L + + AE ++ K + + P++ +
Sbjct: 270 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRM-KRDGLSPNLIS 328
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y T+I GYC +G ++ A +F+ M P+L YN +I GF + + EM
Sbjct: 329 YNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREME 388
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG P+++TY ++ L + +++A + + M G ++ + ++ GLCVVG
Sbjct: 389 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMK 448
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A +++ E ++ P+ Y +I G+CK G S A+ LLKEM G+ P V S+N+
Sbjct: 449 EASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 508
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
IL ++ + A +LLK M ++ P+ +N I +K R +V
Sbjct: 509 XILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI------SKARFDNV 550
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 146/307 (47%), Gaps = 5/307 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G K I + + K +Y+YNS++ + A E F ++ +E
Sbjct: 227 LINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM-RER 285
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V +V TY T+I G C+ + A+++ M + PNL++YNT+I+G+C G L++A
Sbjct: 286 GVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKA 345
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
N+M + G P+ TYN +I G ++ +M G + T+ ++
Sbjct: 346 SSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDA 405
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L ++A ++ +A + D+ Y V+I+G C +G EA L K + LKP
Sbjct: 406 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPN 465
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+N + + G RA+ LLK+M + +PN SYN+ I LC + + + E L+
Sbjct: 466 DVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDE-KWTEAEVLL 524
Query: 426 DRMIRSG 432
MI G
Sbjct: 525 KDMIELG 531
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN------------------- 265
++L + +IN + E+A N+M+ RG P T+N
Sbjct: 81 HVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 140
Query: 266 ---------------AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
MI G C G +D+ ++ +M G NV + +++ G C G
Sbjct: 141 NETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 200
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
++ + E ++ + +Y V+INGF K+G + I L ++M+ G+ P V+++N
Sbjct: 201 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 260
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
++ +G+L+ A L +M + N V+YNT+I GLC + R+ + E L+ RM R
Sbjct: 261 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQER-RVLEAERLMCRMKR 319
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + + Y+ L+ GYC GN++ + ++M
Sbjct: 320 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM 352
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 154/308 (50%), Gaps = 7/308 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK----K 215
+Y +L+ R+ +++A H +++ VP + + + MI K ++E A K
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANC-SFMIDELRKKELVEEAFSLACK 328
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ D+ V PN+ AYN +I+ CK ++A + EM RG PNE+TY +I+ LC G
Sbjct: 329 LGDLGMV-PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+++A L KMR G K V + S++ G C G D+A G L +++ + P SY
Sbjct: 388 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 447
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I G C+ G A+ L +EM RG+ ++F A+ ++ ++D A L +M
Sbjct: 448 PLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 507
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ +PN V++N +I G C+ G ++ L D+M+ G D Y L+ G C V
Sbjct: 508 NVIPNEVTFNVMIEGYCLV-GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566
Query: 456 VMQIAHEM 463
+ ++
Sbjct: 567 ANEFVADL 574
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 163/330 (49%), Gaps = 7/330 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN+L+ L + A+ F ++ + P +V TY +I CK GMIE+A +F
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV-TYAILIHALCKRGMIEDALCLF 396
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +K + YN++ING+CK+G L+ A+ ++ M+ G P +Y+ +I GLC N
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + A L +M G N T +++ G C K D+A ++++N+ P+ ++
Sbjct: 457 GDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+I G+C +G +A L +M GLKP +++ ++ L + +A + +
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ N S ++ GL +GR + L D M G LD ++ ++ ++ + E
Sbjct: 577 SYAVLNNFSLTALLYGL-FREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
+ EM K+ + F T ++DAL
Sbjct: 636 KSCVLFREM--KEQGVKPDDIFYTCMIDAL 663
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 170/340 (50%), Gaps = 5/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A RG ++ A+ F + + +Y YNSL+ + S+ A +VKE
Sbjct: 379 LIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG 438
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P ++Y+ +I G C+ G + +A ++ M + N + +INGFCK +++EA
Sbjct: 439 LTPT-AASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++M++ PNE+T+N MI G C+ G + +A L +M G K + T++S++ G
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC+ +A ++ ++ + + S ++ G + G+ E L EM RG+K
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLD 617
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ SF + ++ + +++ +L ++M + P+ + Y +I L + +Q + +
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL-NCW 676
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
D+M+ G++ + ++ L+ C+ G + + + EM+
Sbjct: 677 DQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 158/344 (45%), Gaps = 40/344 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+ + +L LV++ LA + F ++++ V D YT IR YC+ ++ A+ +
Sbjct: 164 YTASQILFSLVKIRQFALARDLFDKMLQSGV-HLDEYVYTAGIRAYCESRNLDGARGLVV 222
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC--- 272
M VK + + YN ++ G CK ++EA + N M+N G +E+TY ++YG C
Sbjct: 223 RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME 282
Query: 273 --------------------------------INGRVDEAKMLMAKMRLNGFKDNVSTHK 300
V+EA L K+ G NV +
Sbjct: 283 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ LC +FD A + + + P+ +Y ++I+ CK G ++A+ L +MR +
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+K TV+ +N++ + G LDRA LL M + P SY+ +I GLC G +
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC-RNGDLSS 461
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+L M G + ++ L+ G+C++ ++ ++ +M+
Sbjct: 462 AMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGE 241
+KE V PD YT MI K + A +D M + PN + + +IN CK G
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGY 703
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L A+ EM+ PN+ TYN + G +++AK L + M L G ++ +
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNI 762
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++KGLC GK +A+ +R + E+ +PD SY +I+ CK+G ++A L EM +G
Sbjct: 763 LIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA------- 414
LKP V ++N R +GE D+A+ + M + PN+ +Y ++ G+ +
Sbjct: 823 LKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFSC 882
Query: 415 -KGRMQDVEDLVDRMIRSGHN 434
+G Q ++ V ++ S HN
Sbjct: 883 FRGTKQYIQISVYELMDSTHN 903
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---V 222
G++VR+ S + VK + VP Y ++ G CK ++ A +V +VM V
Sbjct: 219 GLVVRMES---------EGVKASAVP-----YNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-------------------------- 256
+ + Y T++ GFC+ ELE A + ++M+ G
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324
Query: 257 --CR-------PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
C+ PN YNA+I LC N R D+A L +M G + N T+ ++ LC
Sbjct: 325 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G + A+ + + + V Y +ING+CK G D A LL M GL PT
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
S++ + L NG+L A+ L ++M + N ++ +I G C K +M + L D+
Sbjct: 445 SYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDK-KMDEAARLFDK 503
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
MI S + ++ +++GYC GN+ Q+ +MV
Sbjct: 504 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 158/346 (45%), Gaps = 41/346 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++ +L+ + + A F +++ NV+P +V T+ MI GYC +G I A +++D
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYD 537
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M +KP+ Y ++I+G C + +A + + ++ N N + A++YGL G
Sbjct: 538 QMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREG 597
Query: 276 RVDEAKMLMAKMRLNGFKDNVST-----------------------------------HK 300
R E L +M + G K ++ + +
Sbjct: 598 RFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYT 657
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
M+ L QA+ ++ +P+ ++ V+IN CK G A L KEM A
Sbjct: 658 CMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAG 717
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+ P F++N G++++A L M Q L + VS+N +I GLC A G++Q+
Sbjct: 718 NVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGH-LASIVSFNILIKGLCKA-GKIQE 775
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
DL+ ++ SG + D YS ++ C+ G++ ++ +EM+ K
Sbjct: 776 AIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
H A + A + S+N L+ L + I+ A + +I E+ PD +Y+T+I C
Sbjct: 745 LHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKIT-ESGFSPDCISYSTIIHELC 803
Query: 206 KMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
KMG I A ++++ M +KP+++AYN I GE ++A M+ G +PN
Sbjct: 804 KMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWD 863
Query: 263 TYNAMIYGLCI 273
TY A++ G+ +
Sbjct: 864 TYRALLSGISL 874
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+G N T +L L + +F A ++++ ++ D Y I +C+ D
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A L+ M + G+K + +N + L +N + A+ + M + + V+Y T++
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276
Query: 410 GLCMAKGRMQDVE---DLVDRMIRSG 432
G C RM+++E + MIR G
Sbjct: 277 GFC----RMEELEMALRITHDMIRLG 298
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 205/416 (49%), Gaps = 37/416 (8%)
Query: 85 PNKYHHTTPCYTAITDVL---------LSHSLISIAASLLKNSNKLSDFFISKLIKAYGD 135
P + H +PC + L L++S++++ L + + + A
Sbjct: 89 PARAHAVSPCTIDLALDLSARLRHPRQLTNSILALFPRLRLPFTPRTFPILFERFAASQR 148
Query: 136 RGNVKAAIFW-FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
R ++ +F H++ ++ L+ NSLL L + A + E PPDV
Sbjct: 149 RPDIAVRLFLSLHRSHRVAQDLPLF--NSLLDALGKSRHASKAASLVRAL--ERRFPPDV 204
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMT------VKPNLLAYNTMINGFCKKGELEEAKKC 248
TY T+ G+C+ +++ + D++ + P YN ++ GF + G+L+ A
Sbjct: 205 VTYNTLADGWCR---VKDTSRALDLLRQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNF 261
Query: 249 MNEMMNRG-----CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+M RG C+P+ ++Y +I+GL + G++D+A+ L +M G ++T+ +++
Sbjct: 262 FLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALI 321
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+ +C G + AV +++ + P+V +Y V+I G C +GK D A+ L++ M+ G +
Sbjct: 322 QVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCE 381
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQ-MDCLPNFVSYNTIICGLCMAKGRMQDV- 421
P V ++N + R E GE+D+A+ L ++M + +CLPN +YN +I + + K R +D+
Sbjct: 382 PVVQTYNVLIRYSFEEGEMDKALHLFERMSKGEECLPNQDTYNIVISAMFVRK-RAEDMA 440
Query: 422 --EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKN 475
+V M+ G+ M + +L G GN Q++ +++ + + +L+
Sbjct: 441 IAARMVMEMVERGYLPRRFMLNRVLNGLMLTGN----QQLSRDLLRMQEKYRRLRR 492
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 187/378 (49%), Gaps = 42/378 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI+ + D G + F + + + C +YN+L+ ++ +K A E F ++
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI- 309
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E V P+V TYT +I G C +G + A + ++M K PN + YN +IN CK G +
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA-KMLMAKMRLNGFKD-NVSTHKS 301
+A + + M R RP+ +TYN ++ GLC G +DEA K+L ++ + + D +V ++ +
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 302 MLKGLC-----------------------------------VVGKFDQAVGYLRNVMEAN 326
++ GLC G ++A+ + + ++
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ + +Y +I+GFCK G + A LL +MR L+P+VF +N + L + G LD+A
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L ++M + + P+ VS+N +I G + G ++ E L+ M R+G + D YS L+
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDG-SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 447 YCEEGNVENVMQIAHEMV 464
+ + G ++ + +MV
Sbjct: 609 FLKLGYLDEAISFFDKMV 626
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 179/364 (49%), Gaps = 41/364 (11%)
Query: 139 VKAAIFWFHQAKQIENGACL-YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS-- 195
+K A+ F QA +++G+ L ++ ++L+ LVR + +LA F+ ++++ + VS
Sbjct: 54 LKNAVSVFQQA--VDSGSSLAFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 196 --------------------------------TYTTMIRGYCKMGMIENAKKVFDVM--- 220
+ +++G C+ A + M
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
++ P++ +YNT+I GFC+ ELE+A + NEM GC + +T+ +I C G++DEA
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+ +M+ G + ++ + S+++G C G+ D+ V+E +P +Y +I G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
FCK+G+ EA + + M RG++P V+++ + L G+ A+ L M + D PN
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPN 351
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+YN II LC G + D ++V+ M + D Y+ LL G C +G+++ ++
Sbjct: 352 AVTYNIIINKLC-KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 461 HEMV 464
+ M+
Sbjct: 411 YLML 414
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 46/352 (13%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA---- 213
+Y++N LL L R A ++ + N + PDV +Y T+IRG+C+ +E A
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREM-RRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 214 ----------------------------------KKVFDVMTVKPNLLAYNTMINGFCKK 239
K M ++ +L+ Y ++I GFC
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
GEL+ K +E++ RG P +TYN +I G C G++ EA + M G + NV T+
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ GLC VGK +A+ L ++E + P+ +Y ++IN CK G +A+ +++ M+
Sbjct: 321 TGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 360 RGLKPTVFSFNAVFRILVENGELDRA----ILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
R +P ++N + L G+LD A L+LK D P+ +SYN +I GLC +
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD--PDVISYNALIHGLC-KE 437
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
R+ D+ D ++ D + LL + G+V M++ ++ K
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 175/343 (51%), Gaps = 13/343 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A+ G + A+ + + K + A L Y SL+ + + F ++++
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P + TY T+IRG+CK+G ++ A ++F+ M V+PN+ Y +I+G C G+ +EA
Sbjct: 278 DSPCAI-TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +N M+ + PN +TYN +I LC +G V +A ++ M+ + + T+ +L G
Sbjct: 337 LQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 306 LCVVGKFDQAVGYLRNVMEAN--MNPDVKSYEVVINGFCKIGKSDEAI---SLLKEMRAR 360
LC G D+A L +++ + +PDV SY +I+G CK + +A+ LL E
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G + T N + ++ G++++A+ L KQ+ + N +Y +I G C G +
Sbjct: 457 GDRVTT---NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT-GMLNV 512
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ L+ +M S Y+CLL C+EG+++ ++ EM
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 138/311 (44%), Gaps = 45/311 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKEN-VVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+YN LLG L + A + + ++K++ PDV +Y +I G CK + A ++D
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 219 VMT--------VKPNLL------------------------------AYNTMINGFCKKG 240
++ V N+L Y MI+GFCK G
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTH 299
L AK + +M +P+ YN ++ LC G +D+A L +M R N F D VS +
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
M+ G G A L + A ++PD+ +Y +IN F K+G DEAIS +M
Sbjct: 569 -IMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G +P ++V + + GE D+ L+K++ D + + T++ +C + M
Sbjct: 628 SGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANM- 686
Query: 420 DVEDLVDRMIR 430
DL R++R
Sbjct: 687 ---DLAKRLLR 694
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 42/317 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L + + A E +++K+ PD TY ++ G C G ++ A K+ +
Sbjct: 354 TYNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 220 MT-----VKPNLLAYNTMINGFCKKGELEEA---------------KKCMNEMMNRGCRP 259
M P++++YN +I+G CK+ L +A + N ++N +
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 260 NEL--------------------TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
++ TY AMI G C G ++ AK L+ KMR++ + +V +
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+L LC G DQA + N PDV S+ ++I+G K G A SLL M
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
GL P +F+++ + ++ G LD AI +M P+ ++++ C+++G
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL-KYCISQGETD 651
Query: 420 DVEDLVDRMIRSGHNLD 436
+ +LV +++ LD
Sbjct: 652 KLTELVKKLVDKDIVLD 668
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 36/219 (16%)
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING-- 340
++A M GF NV H +LKGLC + +AV LR + ++ PDV SY VI G
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188
Query: 341 ---------------------------------FCKIGKSDEAISLLKEMRARGLKPTVF 367
FCK GK DEA+ LKEM+ GL+ +
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+ ++ R + GELDR L ++ + P ++YNT+I G C G++++ ++ +
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL-GQLKEASEIFEF 307
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI G + Y+ L+ G C G + +Q + M+ K
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEK 346
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 81/152 (53%), Gaps = 1/152 (0%)
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A G L +++ +V ++ +++ G C+ + +A+SLL+EMR L P VFS+N V R
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
E EL++A+ L +M C + V++ +I C A G+M + + M G
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA-GKMDEAMGFLKEMKFMGLE 244
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D +Y+ L++G+C+ G ++ + E++ +
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 166/342 (48%), Gaps = 6/342 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I A+ ++ V A+++FH+ ++ L +Y+S++ L + S+K A E ++VK N
Sbjct: 872 IITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK-N 930
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM----TVKPNLLAYNTMINGFCKKGELEE 244
P+V T+T++I G CK G E A ++F + KPN+ Y MI+G+CK+ +L
Sbjct: 931 GWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSR 990
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A+ M +G PN TY +I G C G +A LM M GF N T+ S++
Sbjct: 991 AEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVD 1050
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC G+ ++A L + + D +Y ++I+ CK ++A+ L +M G +P
Sbjct: 1051 GLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQP 1110
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ + + + + L ++ ++ P +Y ++ICG C K ++
Sbjct: 1111 DIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREK-KVSLAVKF 1169
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+M G D Y L+ G C+E ++ Q+ M+ K
Sbjct: 1170 FQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDK 1211
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 163/345 (47%), Gaps = 8/345 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
S +I RG+VK A + ++NG +Y++ SL+ L + + A F ++
Sbjct: 905 SSMISGLCKRGSVKQAFELLEE--MVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKL 962
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
++ + P+V TYT MI GYCK + A+ +F+ M + PN Y T+I+G CK G
Sbjct: 963 IRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGN 1022
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+A + M M N G PN TYN+++ GLC GR +EA L+ N + + T+
Sbjct: 1023 FSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTI 1082
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ C +QA+ +L + + PD+ Y +I FC+ ++ L E+ G
Sbjct: 1083 LISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLG 1142
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L PT ++ ++ ++ A+ ++M C P+ +SY +I GLC + R+ +
Sbjct: 1143 LAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLC-KESRLDEA 1201
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L D MI G + L YC+ + + M I + K
Sbjct: 1202 RQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKK 1246
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 40/297 (13%)
Query: 206 KMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG------ 256
+M ++E A VFD M+ + P+ Y +I G+C+ G + EA + + EMM RG
Sbjct: 808 EMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNA 867
Query: 257 ---------CR--------------------PNELTYNAMIYGLCINGRVDEAKMLMAKM 287
C PN + Y++MI GLC G V +A L+ +M
Sbjct: 868 TLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEM 927
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVG-YLRNVMEANMNPDVKSYEVVINGFCKIGK 346
NG+K NV TH S++ GLC G ++A +L+ + N P+V +Y +I+G+CK K
Sbjct: 928 VKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEK 987
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
A L + M+ +GL P ++ + + G +A L++ M PN +YN+
Sbjct: 988 LSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNS 1047
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
I+ GLC +GR ++ L++ ++ D Y+ L+ C+ ++ + ++M
Sbjct: 1048 IVDGLC-KRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKM 1103
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 3/228 (1%)
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+E A +EM RG P+ TY +I G C NG V EA + +M GF + +T
Sbjct: 812 VEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTL 871
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ C ++AV + V + ++P++ +Y +I+G CK G +A LL+EM G
Sbjct: 872 IITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNG 931
Query: 362 LKPTVFSFNAVFRILVENGELDRAI-LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
KP V++ ++ L + G +RA L LK + + PN +Y +I G C + ++
Sbjct: 932 WKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEE-KLSR 990
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
E L +RM G + Y+ L+ G+C+ GN ++ E+++ +G
Sbjct: 991 AEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELM-ELMSNEG 1037
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
E ++ F +IGK EA+ ++ +MR +GL T N + + E ++ A + +M
Sbjct: 765 ECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSA 824
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ +Y II G C G + + + + M+ G +D + ++ +CE+ V
Sbjct: 825 RGVYPDSCTYKYIIVGYCR-NGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVN 883
Query: 455 NVMQIAHEMVTKKGRLLKLKNF 476
+ H+ VTK G L N+
Sbjct: 884 RAVWFFHK-VTKMGLSPNLINY 904
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 168/322 (52%), Gaps = 11/322 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG---MIENAK 214
++++N ++ L + + A + + K P+V +Y T+I GYCK+G + A
Sbjct: 223 VFTFNVVINALCKTGKMNKARDVMEDM-KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
V M V PNL +N +I+GF K L + K EM+++ +PN ++YN++I GL
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G++ EA + KM G + N+ T+ +++ G C +A+ +V P
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+ Y ++I+ +CK+GK D+ +L +EM G+ P V ++N + L NG ++ A L Q
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ LP+ V+++ ++ G C KG + L+ M + G Y+ ++KGYC+EG
Sbjct: 462 LTSKG-LPDLVTFHILMEGYC-RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Query: 452 NVENVMQIAHEMVTKKGRLLKL 473
N++ + +M +K R L++
Sbjct: 520 NLKAATNMRTQM--EKERRLRM 539
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 167/314 (53%), Gaps = 10/314 (3%)
Query: 160 SYNSLLGVLVRVNS---IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
SYN+L+ ++ + A+ ++V EN V P+++T+ +I G+ K + + KV
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMV-ENDVSPNLTTFNILIDGFWKDDNLPGSMKV 318
Query: 217 FDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
F M VKPN+++YN++ING C G++ EA ++M++ G +PN +TYNA+I G C
Sbjct: 319 FKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK 378
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
N + EA + ++ G + ++ C +GK D + + PDV +
Sbjct: 379 NDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGT 438
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I G C+ G + A L ++ ++GL P + +F+ + GE +A +LLK+M
Sbjct: 439 YNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMS 497
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH-NLDFTMYSCLLKGYCEEGN 452
+M P ++YN ++ G C +G ++ ++ +M + ++ Y+ LL+GY ++G
Sbjct: 498 KMGLKPRHLTYNIVMKGYC-KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Query: 453 VENVMQIAHEMVTK 466
+E+ + +EM+ K
Sbjct: 557 LEDANMLLNEMLEK 570
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 145/288 (50%), Gaps = 11/288 (3%)
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAY 229
S+K+ +E Q VK NV+ +Y ++I G C G I A + D M V+PNL+ Y
Sbjct: 315 SMKVFKEMLDQDVKPNVI-----SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITY 369
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +INGFCK L+EA + +G P YN +I C G++D+ L +M
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G +V T+ ++ GLC G + A + + PD+ ++ +++ G+C+ G+S +
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRK 488
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP-NFVSYNTII 408
A LLKEM GLKP ++N V + + G L A + QM + L N SYN ++
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
G KG+++D L++ M+ G + Y + + ++G V ++
Sbjct: 549 QGYSQ-KGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDI 595
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 130/248 (52%), Gaps = 4/248 (1%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI---NGRVD 278
++PN+ +N +IN CK G++ +A+ M +M GC PN ++YN +I G C NG++
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A ++ +M N N++T ++ G ++ + +++ ++ P+V SY +I
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG C GK EAIS+ +M + G++P + ++NA+ +N L A+ + + +
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P YN +I C G++ D L + M R G D Y+CL+ G C GN+E +
Sbjct: 399 PTTRMYNMLIDAYCKL-GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 459 IAHEMVTK 466
+ ++ +K
Sbjct: 458 LFDQLTSK 465
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 39/232 (16%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + +K A+ F K YN L+ ++ I ++ +E
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFCKKGELEEAK 246
+VP DV TY +I G C+ G IE AKK+FD +T K P+L+ ++ ++ G+C+KGE +A
Sbjct: 432 IVP-DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAA 490
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCING------------------------------- 275
+ EM G +P LTYN ++ G C G
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 276 -----RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
++++A ML+ +M G N T++ + + + G G+L NV
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNV 602
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K +S + + KEM R ++P VF+FN V L + G++++A +++ M C PN V
Sbjct: 200 KENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVV 259
Query: 403 SYNTIICGLCM--AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
SYNT+I G C G+M + ++ M+ + + + T ++ L+ G+ ++ N+ M++
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVF 319
Query: 461 HEMVTK 466
EM+ +
Sbjct: 320 KEMLDQ 325
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV---FRIL 376
+ ++ + P+V ++ VVIN CK GK ++A ++++M+ G P V S+N + + L
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK---GRMQDVEDLVDRMIRSGH 433
NG++ +A +LK+M + D PN ++N +I G G M+ ++++D+ ++
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP-- 329
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ Y+ L+ G C G + + + +MV+
Sbjct: 330 --NVISYNSLINGLCNGGKISEAISMRDKMVS 359
>gi|255660948|gb|ACU25643.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 484
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 215/432 (49%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHGAKKAEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SY++L V++R
Sbjct: 70 DMPKKGLEWDEDLWVL-MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P T+ MI G+ G ++ A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRHTFNFMIWGFFLSGKVDTANRFFEXMKSREIMPDVIT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EE + EM R P +TY +I G R+D+A L+ +M+
Sbjct: 188 YNTMINGYYRVKKMEEXENYFMEMKGRNIEPTVVTYTTLIKGYVSVDRIDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G N T+ ++L GLC K +A L+ +++ + P D + +I+G CK+G
Sbjct: 248 GFGINPNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPKDNSIFLRLISGQCKVGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQM--------PQM 395
D A +LK M ++ +V + + +L+EN G+ DRA+ L ++ PQ
Sbjct: 308 DAAADVLKVM----IRLSVPTEAGHYGVLIENCCKAGQYDRAVKFLDKVIEKDIILRPQS 363
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G LD + L++G+ +EG+ ++
Sbjct: 364 SLHMEPSAYNPLIEYLC-NNGQTAKAETLVRQLMKLG-VLDPIALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 149/315 (47%), Gaps = 15/315 (4%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+ + + VL + A +FF + + N+ + T+ +I + + +A+ +
Sbjct: 10 FDHELVYNVLHGAKKAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 219 VMTVKPNLLAYNT-----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
M K L ++ MI+ + K G ++E+ K +M G +Y+A+ +
Sbjct: 70 DMPKKG--LEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILR 127
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
GR AK KM G + T M+ G + GK D A + + + PDV +
Sbjct: 128 RGRYMMAKRYFNKMLSEGIEPTRHTFNFMIWGFFLSGKVDTANRFFEXMKSREIMPDVIT 187
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +ING+ ++ K +E + EM+ R ++PTV ++ + + V +D A+ L+++M
Sbjct: 188 YNTMINGYYRVKKMEEXENYFMEMKGRNIEPTVVTYTTLIKGYVSVDRIDDALRLVEEMK 247
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVE----DLVDRMIRSGHNLDFTMYSCLLKGYCE 449
PN ++Y+T++ GLC A+ +M + + ++VD+ I N +++ L+ G C+
Sbjct: 248 GFGINPNAITYSTLLPGLCNAE-KMSEAQSILKEMVDKYIAPKDN---SIFLRLISGQCK 303
Query: 450 EGNVENVMQIAHEMV 464
GN++ + M+
Sbjct: 304 VGNLDAAADVLKVMI 318
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 12/261 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LIK Y + A+ + K +Y++LL L + A+ ++V
Sbjct: 224 TTLIKGYVSVDRIDDALRLVEEMKGFGINPNAITYSTLLPGLCNAEKMSEAQSILKEMVD 283
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ + P D S + +I G CK+G ++ A V VM +V Y +I CK G+ +
Sbjct: 284 KYIAPKDNSIFLRLISGQCKVGNLDAAADVLKVMIRLSVPTEAGHYGVLIENCCKAGQYD 343
Query: 244 EAKKCMNEMMNRG--CRPNE------LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
A K +++++ + RP YN +I LC NG+ +A+ L+ ++ G D
Sbjct: 344 RAVKFLDKVIEKDIILRPQSSLHMEPSAYNPLIEYLCNNGQTAKAETLVRQLMKLGVLDP 403
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
++ + ++++G G D A L+ ++ ++ + +Y+ ++ + + + +A + L
Sbjct: 404 IALN-TLIRGHSQEGSPDSAFELLKIMLRRKVDSEESAYDSLVQSYLRKNEPADAKAALD 462
Query: 356 EMRARGLKPTVFSFNAVFRIL 376
M G P + +V L
Sbjct: 463 SMVENGHLPDSSLYRSVMESL 483
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 231/517 (44%), Gaps = 95/517 (18%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
N+V V++ HAL FF W + H + I ++L S ++ A +L
Sbjct: 122 NLVYNVLHAAKKSEHALNFFRWVERAGL----FQHDRETHFKIIEILGRASKLNHARCIL 177
Query: 116 -----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVR 170
K D F+ LI++YG G V+ A+ F + K++ + SY++L ++R
Sbjct: 178 LDMPNKGVQWDEDLFVV-LIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMR 236
Query: 171 VNSIKLAEEFFHQIVKENVVP----------------------------------PDVST 196
+A+ +F+ ++ E + P PDV T
Sbjct: 237 RGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVT 296
Query: 197 YTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y TMI GYC+ M+E A++ F M + P +++Y TMI G+ ++A + EM
Sbjct: 297 YNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMK 356
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF--KDN---------------- 295
G +PN++TY+ ++ GLC ++ EA+ ++ +M F KDN
Sbjct: 357 AAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDL 416
Query: 296 -VSTH--KSMLK---------------GLCVVGKFDQAVGYLRNVME--------ANMNP 329
+ H K+M++ C G +DQAV L N++E + +
Sbjct: 417 DAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEM 476
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+ +Y ++I C G++ +A + +++ +G++ V +FN + R + G D A +L
Sbjct: 477 EASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEV-AFNNLIRGHAKEGNPDLAFEML 535
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
K M + + SY +I ++KG D + +D MI +GH+ D ++ +++
Sbjct: 536 KIMGRRGVSRDAESYKLLIKSY-LSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFA 594
Query: 450 EGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLL 486
+G V+ ++ + M+ K + + + + ++++AL +
Sbjct: 595 DGRVQTASRVMNSMLDKG--ITENLDLVAKILEALFM 629
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 10/276 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L A+ FF Q++K+ + D + +IRG+ K G + A ++ +
Sbjct: 480 AYNLIIQYLCNHGQTGKADTFFRQLLKKGI--QDEVAFNNLIRGHAKEGNPDLAFEMLKI 537
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V + +Y +I + KGE +AK ++ M+ G P+ + +++ L +GR
Sbjct: 538 MGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGR 597
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V A +M M G +N+ +L+ L + G ++A+G + +M N PD S
Sbjct: 598 VQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCNCPPDFNS--- 654
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++ C+ GK+ A LL R S+ V L+ G+ A +L ++ +
Sbjct: 655 LLSVLCEKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYAILCKIMEKG 714
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
++ S + +I L Q D++ RMI+ G
Sbjct: 715 GAKDWSSCDDLIKSLNQEGNTKQ--ADILSRMIKGG 748
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 122/290 (42%), Gaps = 16/290 (5%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL-----------AYNTMINGFCK 238
+P + Y +I CK GM + A K+ + + K +L AYN +I C
Sbjct: 431 IPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCN 490
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G+ +A +++ +G + +E+ +N +I G G D A ++ M G + +
Sbjct: 491 HGQTGKADTFFRQLLKKGIQ-DEVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAES 549
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+K ++K G+ A L +++E +PD + V+ G+ A ++ M
Sbjct: 550 YKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSML 609
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+G+ + + L G + A+ + + +C P+F S +++C KG+
Sbjct: 610 DKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCNCPPDFNSLLSVLC----EKGKT 665
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
L+D + N++F+ Y +L G N I +++ K G
Sbjct: 666 TSAFKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYAILCKIMEKGG 715
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 200/437 (45%), Gaps = 18/437 (4%)
Query: 21 VTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNP-YHALFFFNWAS 79
V+ + + R+ P P+ S+ LD + + +V +V+ +N AL FF WA
Sbjct: 95 VSEVAERVCRVVSSQPEPRIASA--LDALGVNMSPELVAEVLRNLSNAGILALAFFRWAE 152
Query: 80 NPNP---NPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDR 136
+H+ I L SL+ ++ LS +++ Y
Sbjct: 153 RQQGFRYTAESFHNLIEALGKIKQFRLVWSLVEA----MRCRGLLSKDTFRLIVRRYARA 208
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
VK A+ F + A L YN L+ VL + +K A F ++ + PD+ T
Sbjct: 209 RKVKEAVETFEKMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKT 268
Query: 197 YTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
YT ++ G+ + K V+ M +KP+++AY T+I+ FCK G+ +EA K EM
Sbjct: 269 YTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREME 328
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
GC P+ Y +I GL R+DEA + +GF V T +++ C KF
Sbjct: 329 ANGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQ 388
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A + + + + P+ ++Y++++ K K +EA ++ + M G +P + ++ +
Sbjct: 389 HAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMV 448
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV----EDLVDRMI 429
+ N +D A+ + KQM + LP ++++I GLC + R+++ ++++D+ I
Sbjct: 449 GMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCF-ENRLEEACVYFQEMLDKGI 507
Query: 430 RSGHNLDFTMYSCLLKG 446
R L + L++G
Sbjct: 508 RPPGQLFSNLKEALIEG 524
>gi|242043154|ref|XP_002459448.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
gi|241922825|gb|EER95969.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
Length = 316
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 158/300 (52%), Gaps = 23/300 (7%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKC 248
P+V TY+ +I CK G+ A+++F+ M KPN Y ++++G+ +G L +
Sbjct: 8 PNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGNLVDMNNV 67
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M+ G RP+ +N IY C GR+DEA + KM+ GF ++ T+ +++ GLC
Sbjct: 68 KDLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDGLCK 127
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+G+ D A+ +++ ++P++ ++ +I+GF GK ++A L EM RG+ P V +
Sbjct: 128 IGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPNVNT 187
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
FN++ L + G++ A L MP+ PN VSYNT+I G +A G + +V L+D M
Sbjct: 188 FNSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIA-GEVGEVMKLLDDM 246
Query: 429 IRSGHNLDFTMYSCLLKGY-------------------CEEGNVENVMQIAHEMVTKKGR 469
+ G + + LL G CE+ +E+++ + EM++K +
Sbjct: 247 LLIGLKPNAVNLNTLLDGMLSIGLKPNVDTCKTLIDSCCEDDRIEDILTLFREMLSKADK 306
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 137/298 (45%), Gaps = 36/298 (12%)
Query: 148 QAKQIENGACLYSYNSLL------GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
Q+ Q N A +Y SLL G LV +N++K ++ +N + PD + I
Sbjct: 38 QSGQKPNAA---TYRSLLHGYATEGNLVDMNNVK-------DLMVQNGMRPDRHVFNIEI 87
Query: 202 RGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
YCK G ++ A F+ M P+++ Y T+I+G CK G L++A +M++ G
Sbjct: 88 YAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLS 147
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
PN +T+ +I+G + G+ ++A+ L +M G NV+T SM+ L GK +A
Sbjct: 148 PNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPNVNTFNSMIDRLFKEGKVTEARKL 207
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+ A P+V SY +I+G+ G+ E + LL +M GLKP + N
Sbjct: 208 FDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPNAVNLNT------- 260
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
LL M + PN + T+I C R++D+ L M+ D
Sbjct: 261 ---------LLDGMLSIGLKPNVDTCKTLIDSCC-EDDRIEDILTLFREMLSKADKTD 308
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 124/244 (50%), Gaps = 20/244 (8%)
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
I AY G + A F++ +Q+ + +Y +++ L ++ + A F Q++ + +
Sbjct: 87 IYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 146
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
P++ T+TT+I G+ G E A+++F M + PN+ +N+MI+ K+G++ EA+
Sbjct: 147 -SPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPNVNTFNSMIDRLFKEGKVTEAR 205
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
K + M G +PN ++YN MI+G I G V E L+ M L G K N ++L G+
Sbjct: 206 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPNAVNLNTLLDGM 265
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
+G + P+V + + +I+ C+ + ++ ++L +EM ++ K
Sbjct: 266 LSIG----------------LKPNVDTCKTLIDSCCEDDRIEDILTLFREMLSKADKTDT 309
Query: 367 FSFN 370
+ N
Sbjct: 310 ITEN 313
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 34/247 (13%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M G PN +TY+ +I LC +G EA+ + M +G K N +T++S+L G G
Sbjct: 1 MSRDGQGPNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGN 60
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
+++ M PD + + I +CK G+ DEA +M+ G P + ++
Sbjct: 61 LVDMNNVKDLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTT 120
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM------------------ 413
V L + G LD A+ QM PN +++ T+I G M
Sbjct: 121 VIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRG 180
Query: 414 ----------------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+G++ + L D M R+G + Y+ ++ GY G V VM
Sbjct: 181 IPPNVNTFNSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVM 240
Query: 458 QIAHEMV 464
++ +M+
Sbjct: 241 KLLDDML 247
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 231/517 (44%), Gaps = 95/517 (18%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
N+V V++ HAL FF W + H + I ++L S ++ A +L
Sbjct: 122 NLVYNVLHAAKKSEHALNFFRWVERAGL----FQHDRETHFKIIEILGRASKLNHARCIL 177
Query: 116 -----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVR 170
K D F+ LI++YG G V+ A+ F + K++ + SY++L ++R
Sbjct: 178 LDMPNKGVQWDEDLFVV-LIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMR 236
Query: 171 VNSIKLAEEFFHQIVKENVVP----------------------------------PDVST 196
+A+ +F+ ++ E + P PDV T
Sbjct: 237 RGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVT 296
Query: 197 YTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y TMI GYC+ M+E A++ F M + P +++Y TMI G+ ++A + EM
Sbjct: 297 YNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMK 356
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF--KDN---------------- 295
G +PN++TY+ ++ GLC ++ EA+ ++ +M F KDN
Sbjct: 357 AAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDL 416
Query: 296 -VSTH--KSMLK---------------GLCVVGKFDQAVGYLRNVME--------ANMNP 329
+ H K+M++ C G +DQAV L N++E + +
Sbjct: 417 DAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEM 476
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+ +Y ++I C G++ +A + +++ +G++ V +FN + R + G D A +L
Sbjct: 477 EASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEV-AFNNLIRGHAKEGNPDLAFEML 535
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
K M + + SY +I ++KG D + +D MI +GH+ D ++ +++
Sbjct: 536 KIMGRRGVSRDAESYKLLIKSY-LSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFA 594
Query: 450 EGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLL 486
+G V+ ++ + M+ K + + + + ++++AL +
Sbjct: 595 DGRVQTASRVMNSMLDKG--ITENLDLVAKILEALFM 629
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 10/276 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L A+ FF Q++K+ + D + +IRG+ K G + A ++ +
Sbjct: 480 AYNLIIQYLCNHGQTGKADTFFRQLLKKGI--QDEVAFNNLIRGHAKEGNPDLAFEMLKI 537
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V + +Y +I + KGE +AK ++ M+ G P+ + +++ L +GR
Sbjct: 538 MGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGR 597
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V A +M M G +N+ +L+ L + G ++A+G + +M N PD S
Sbjct: 598 VQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCNCPPDFNS--- 654
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++ C+ GK+ A LL R S+ V L+ G+ A +L ++ +
Sbjct: 655 LLSVLCEKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYAILCKIMEKG 714
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
++ S + +I L Q D++ RMI+ G
Sbjct: 715 GAKDWSSCDDLIKSLNQEGNTKQ--ADILSRMIKGG 748
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 122/290 (42%), Gaps = 16/290 (5%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL-----------AYNTMINGFCK 238
+P + Y +I CK GM + A K+ + + K +L AYN +I C
Sbjct: 431 IPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCN 490
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G+ +A +++ +G + +E+ +N +I G G D A ++ M G + +
Sbjct: 491 HGQTGKADTFFRQLLKKGIQ-DEVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAES 549
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+K ++K G+ A L +++E +PD + V+ G+ A ++ M
Sbjct: 550 YKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSML 609
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+G+ + + L G + A+ + + +C P+F S +++C KG+
Sbjct: 610 DKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCNCPPDFNSLLSVLC----EKGKT 665
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
L+D + N++F+ Y +L G N I +++ K G
Sbjct: 666 TSAFKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYAILCKIMEKGG 715
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 181/409 (44%), Gaps = 40/409 (9%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
Y + + L I A L ++ + L+K + + + + K++
Sbjct: 48 YATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGW 107
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
+Y +++ R K AEE ++ ++ + P V T T +I YCK G + +A
Sbjct: 108 RPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPC-VVTCTAVINAYCKEGRMSDAL 166
Query: 215 KVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN----------- 260
+V ++M + KPN+ YN ++ GFC +G++ +A +N+M G P+
Sbjct: 167 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 226
Query: 261 ------------------------ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ TYNA+I LC +GR D+A L + G K N
Sbjct: 227 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 286
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T S++ GLC GK D A +L ++ A PD +Y I CK+ S E +S + E
Sbjct: 287 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 346
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M + +KP+ ++ V L++ +M C P+ V+Y T + C+ +G
Sbjct: 347 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI-EG 405
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
R+ + E+++ M ++G +D Y+ L+ G+ G ++ + I +M +
Sbjct: 406 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS 454
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 163/343 (47%), Gaps = 38/343 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++NSL+ R N + +A + F ++ DV +Y T+I G C+ G I+ A ++F
Sbjct: 11 YTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQ-DVVSYATLIEGLCEAGRIDEAVELFG 69
Query: 219 VMTVKPNLLAYNTMINGFC--KKGE---------------------------------LE 243
M +P++ Y ++ G C ++GE +
Sbjct: 70 EMD-QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAK 128
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA++ + EM +G P +T A+I C GR+ +A ++ M+L G K NV T+ +++
Sbjct: 129 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 188
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+G C GK +A+ L + +NPD +Y ++I G C G + A LL+ M GL
Sbjct: 189 QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 248
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+++NA+ L ++G D+A L + PN V++N++I GLC + G+
Sbjct: 249 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKS-GKADIAWK 307
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+++M+ +G D YS ++ C+ + + EM+ K
Sbjct: 308 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 350
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 149/278 (53%), Gaps = 8/278 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
PD T+ ++I GYC+ ++ A+ +FD M ++ ++++Y T+I G C+ G ++EA +
Sbjct: 8 PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 67
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
EM +P+ Y A++ GLC R +E +++ +M+ G++ + + +++ C
Sbjct: 68 FGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR 123
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
K +A L+ + E + P V + VIN +CK G+ +A+ +L+ M+ RG KP V++
Sbjct: 124 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 183
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+NA+ + G++ +A+ LL +M P+ V+YN +I G C+ G ++ L+ M
Sbjct: 184 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCI-DGHIESAFRLLRLM 242
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G D Y+ L+ C++G + + + T+
Sbjct: 243 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 280
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 132/241 (54%), Gaps = 5/241 (2%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P+ +N++I G+C+ +++ A+ ++M RG + ++Y +I GLC GR+DEA
Sbjct: 7 RPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVE 66
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M + ++ + +++KGLC + ++ + LR + E P ++Y V++ C
Sbjct: 67 LFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRC 122
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ K+ EA +L+EM +GL P V + AV + G + A+ +L+ M C PN
Sbjct: 123 RERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVW 182
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YN ++ G C +G++ L+++M G N D Y+ L++G C +G++E+ ++
Sbjct: 183 TYNALVQGFC-NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRL 241
Query: 463 M 463
M
Sbjct: 242 M 242
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 169/395 (42%), Gaps = 63/395 (15%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I AY G + A+ K +++YN+L+ + A +++ +
Sbjct: 150 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM-R 208
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
V PD TY +IRG C G IE+A ++ +M + + YN +IN CK G +
Sbjct: 209 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 268
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + + RG +PN +T+N++I GLC +G+ D A + KM G + T+ S +
Sbjct: 269 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 328
Query: 304 KGLCVVGKFDQAVGYLRNVMEANM-----------------------------------N 328
+ LC + + + ++ +++ ++ N
Sbjct: 329 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 388
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PDV +Y + +C G+ +EA ++L EM G+ ++N + G+ D A+ +
Sbjct: 389 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 448
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED--------------------LVDRM 428
LKQM + +PN +Y ++ L RM+ VED L D M
Sbjct: 449 LKQMTSVASVPNQFTYFILLRHLV----RMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM 504
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ + YS +L+G+ E+G E + M
Sbjct: 505 KKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLM 539
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 165/376 (43%), Gaps = 57/376 (15%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L++ + + G V A+ ++ + +YN L+ I+ A + +
Sbjct: 187 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 246
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
++ D TY +I CK G + A +FD + +KPN + +N++ING CK G+ + A
Sbjct: 247 LIA-DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIA 305
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLC------------------------INGRVDEAK 281
K + +M++ GC P+ TY++ I LC +N + K
Sbjct: 306 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 365
Query: 282 ML-----------MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
+L +M +G +V T+ + ++ C+ G+ ++A L + + + D
Sbjct: 366 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 425
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV------------- 377
+Y +++G IG++D A+S+LK+M + P F++ + R LV
Sbjct: 426 TMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTP 485
Query: 378 ----ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+ EL L M + + LPN +Y++I+ G GR ++ LV M
Sbjct: 486 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS-EDGRTEEATSLVSLMKEDSI 544
Query: 434 NLDFTMYSCLLKGYCE 449
+L+ +Y+ L+ +C+
Sbjct: 545 SLNEDIYTALVTCFCK 560
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 136/329 (41%), Gaps = 58/329 (17%)
Query: 140 KAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP------ 191
KA I W K + G Y+Y+S + L ++ + F ++++++V P
Sbjct: 301 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYT 360
Query: 192 ----------------------------PDVSTYTTMIRGYCKMGMIENAKKVFDVMT-- 221
PDV TYTT +R YC G + A+ V M+
Sbjct: 361 IVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN 420
Query: 222 -VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
V + +AYNT+++G G+ + A + +M + PN+ TY ++ L + R+ E
Sbjct: 421 GVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL-VRMRLVED 479
Query: 281 KM------------------LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
+ L M+ N F N T+ S+L+G G+ ++A + +
Sbjct: 480 VLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLM 539
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
E +++ + Y ++ FCK + +A L+ M G P + S+ + L+ G+
Sbjct: 540 KEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQT 599
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGL 411
D+A + D P+ + + II GL
Sbjct: 600 DKAKEIFMNSRWKDYSPDEIVWKVIIDGL 628
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV--- 216
+YN+L+ + A Q+ VP TY ++R +M ++E+ +
Sbjct: 428 AYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF-TYFILLRHLVRMRLVEDVLPLTPA 486
Query: 217 --------------FDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
FDVM PN Y++++ GF + G EEA ++ M
Sbjct: 487 GVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISL 546
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
NE Y A++ C + R +A +L+ M +GF + +++ +L GL G+ D+A
Sbjct: 547 NEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF 606
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSD---EAISLLKEMRAR 360
N + +PD ++V+I+G K G SD E I +L+ M R
Sbjct: 607 MNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCR 650
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 146/275 (53%), Gaps = 5/275 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
P+V TY +I C+ G ++ A+++ + + KPN + YNT++ G C +A++
Sbjct: 14 PNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEEL 73
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++EM+ C PNE T N ++ L G + + + KM +G NV T+ +++ G+C
Sbjct: 74 LDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCE 133
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G D A+ L N+ PD+ +Y ++ G C + ++A L+ +M P +
Sbjct: 134 QGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVT 193
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
FN + L + G + +A + KQMP+ C PN +Y+TII GL A G+M+ +L++ M
Sbjct: 194 FNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKA-GKMEQALELLNEM 252
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G+N D MY L + +E +E V+Q+ H++
Sbjct: 253 ASKGYNTD-KMYQLLTESLNKEDKIEEVVQVVHKL 286
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 142/257 (55%), Gaps = 1/257 (0%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+PN++ YN +I+ C++G++++A++ +N + +RGC+PN + YN ++ GLC R +A+
Sbjct: 13 EPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEE 72
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L+ +M N +T ++ L G + YL + + +V +Y VI+G C
Sbjct: 73 LLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMC 132
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ G D A+ LL M++ G KP + ++N + + L + + A L+ +M Q DCLP+ V
Sbjct: 133 EQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNV 192
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++NTII LC KG + ++ +M G N + T YS ++ G + G +E +++ +E
Sbjct: 193 TFNTIISFLCQ-KGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNE 251
Query: 463 MVTKKGRLLKLKNFLTR 479
M +K K+ LT
Sbjct: 252 MASKGYNTDKMYQLLTE 268
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 152/307 (49%), Gaps = 41/307 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L L + AEE ++V+EN PP+ +T ++ + G+++ + +
Sbjct: 53 NYNTVLKGLCSIERWVDAEELLDEMVREN-CPPNEATVNVIVNTLSRKGLLQKVTRYLEK 111
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ N++ YN +I+G C++G ++ A + ++ M + GC+P+ +TYN ++ GLC +
Sbjct: 112 MSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQ 171
Query: 277 VDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++A+ LM KM N DNV T +++ LC G QA + + E NP+ +Y
Sbjct: 172 WEDAEELMIKMSQNDCLPDNV-TFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYS 230
Query: 336 VVINGFCKIGKSDEAISLLKEMRAR----------------------------------G 361
+I G K GK ++A+ LL EM ++ G
Sbjct: 231 TIIGGLAKAGKMEQALELLNEMASKGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSG 290
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P FN V +L NG+ D AI +L M C+P+ ++Y +I GL +G +Q+
Sbjct: 291 ISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSY-EGYLQEA 349
Query: 422 EDLVDRM 428
+LV R+
Sbjct: 350 RELVSRL 356
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 111/212 (52%), Gaps = 4/212 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
PD+ TY T+++G C E+A+++ M+ P+ + +NT+I+ C+KG + +A +
Sbjct: 154 PDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEV 213
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+M +GC PN TY+ +I GL G++++A L+ +M G+ + ++ + + L
Sbjct: 214 FKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTD-KMYQLLTESLNK 272
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
K ++ V + + ++ ++P + V+ C+ GK+D AI +L +M + G P +
Sbjct: 273 EDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELT 332
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
+ + L G L A L+ ++ D L N
Sbjct: 333 YIILIEGLSYEGYLQEARELVSRLCSRDVLSN 364
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L+ MR G + NV T+ ++ +C G DQA L ++ P+ +Y V+ G C
Sbjct: 3 LIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLC 62
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
I + +A LL EM P + N + L G L + L++M + C N V
Sbjct: 63 SIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVV 122
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YN +I G+C +G + +L+ M G D Y+ LLKG C E+ ++ +
Sbjct: 123 TYNAVISGMC-EQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181
Query: 463 M 463
M
Sbjct: 182 M 182
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 36/148 (24%)
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+ L+ MRA G +P V ++N + + G++D+A LL +P C PN V+YNT++ G
Sbjct: 1 MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60
Query: 411 LCMAKGRMQDVEDLVDRMIRS-----------------------------------GHNL 435
LC + R D E+L+D M+R G
Sbjct: 61 LCSIE-RWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTA 119
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ Y+ ++ G CE+G+V++ +++ M
Sbjct: 120 NVVTYNAVISGMCEQGHVDSALELLSNM 147
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 185/351 (52%), Gaps = 12/351 (3%)
Query: 119 NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAE 178
+KL+ IS L G G V+ A+ F++A++ G +Y+Y++++ R + A
Sbjct: 200 SKLASIMISTL----GRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREAL 255
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGM-IENAKKVFDVMT---VKPNLLAYNTMIN 234
+ F Q +K+ P++ TY T+I K G+ ++ A +FD M V+P+ + +N++I
Sbjct: 256 KVF-QAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLI- 313
Query: 235 GFCKKGEL-EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
C +G L E++++ EM RG + T+N +I +C G+++ A +M MR
Sbjct: 314 AVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNIS 373
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
NV T+ +M+ G +G F++A+ ++ E+ + PD SY +I+ + K+G+ D+A+
Sbjct: 374 PNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIA 433
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
K+M GLK V ++NA+ + G+ A L +M +PN ++Y+ +I
Sbjct: 434 CKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSK 493
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
A G QDV ++ R+G D +YS L+ C+ G VE+ + + EM
Sbjct: 494 A-GMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMT 543
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 131/252 (51%), Gaps = 4/252 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++NSL+ V R + ++ F ++ + + D+ T+ T+I CK G +E A +
Sbjct: 308 TFNSLIAVCSRGGLWEDSQRVFAEMQRRGI-EQDIFTFNTLIDAVCKGGQMELAASIMTT 366
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + PN++ Y+TMI+G+ K G EEA ++M G RP+ ++YN +I GR
Sbjct: 367 MRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGR 426
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D+A + M G K +V T+ +++ GK+ A + + P+V +Y
Sbjct: 427 FDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSA 486
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ + K G + ++ E + GLKP V ++++ + G ++ A++LL++M Q
Sbjct: 487 LIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAG 546
Query: 397 CLPNFVSYNTII 408
PN V+YN++I
Sbjct: 547 IQPNIVTYNSLI 558
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 128/254 (50%), Gaps = 6/254 (2%)
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+F Q + IE ++++N+L+ + + ++LA + +N+ P+V TY+TMI
Sbjct: 328 VFAEMQRRGIEQD--IFTFNTLIDAVCKGGQMELAASIMTTMRGKNI-SPNVVTYSTMID 384
Query: 203 GYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
GY K+G E A ++ M V+P+ ++YNT+I+ + K G ++A +M G +
Sbjct: 385 GYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKA 444
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TYNA+I G+ +A L KM+ G NV T+ +++ G
Sbjct: 445 DVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVF 504
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
A + PDV Y +I+ CK G ++A+ LL+EM G++P + ++N++
Sbjct: 505 TEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRY 564
Query: 380 GELDRAILLLKQMP 393
G+ D+ + MP
Sbjct: 565 GQADKLEAVKANMP 578
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 12/280 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S +I YG G + AI +H K+ SYN+L+ + ++ + +
Sbjct: 380 STMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLG--RFDDALIACKDM 437
Query: 187 ENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
E V + DV TY +I Y K G ++A +FD M + PN+L Y+ +I+ + K G
Sbjct: 438 ERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMH 497
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++ E G +P+ + Y+++I C G V++A +L+ +M G + N+ T+ S+
Sbjct: 498 QDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSL 557
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN-GFCKIGKSDE-----AISLLKE 356
+ G+ D+ N+ + +S EVV + SD A+S+ E
Sbjct: 558 IDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHE 617
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
M+ GLKP V +F+A+ L A +LL+QM D
Sbjct: 618 MQQFGLKPNVVTFSAILNACSRCASLQEASVLLEQMRFFD 657
>gi|255660908|gb|ACU25623.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 481
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 216/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHSAKTSEHALQFFRWVERSNL----FEHBRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG +G V+ ++ F + +++ L SY++L V++R
Sbjct: 70 DMPKKGLEWDEDMWVM-MIDSYGKQGIVQESVKLFQKMEELGVERTLKSYDALFKVILRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+A+ +F++++ E + P + +I G+ G +E A + F+ M + P+++
Sbjct: 129 GRYMMAKRYFNKMLSEG-IEPTRXXFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM R P +TY +I G +VD+A L +M+
Sbjct: 188 YNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLXEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +++ + P D + +I C G
Sbjct: 248 GFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYLAPTDNSIFMRLITSQCTSGHL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ +V + + +L+EN G+ D+A+ LL ++ + D + P
Sbjct: 308 DAASDVLKAM----IRLSVPTEAGHYGVLIENFCKXGQYDQAVKLLDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G D T + L++G+ +EG+ ++
Sbjct: 364 TLHLEPSAYNPMIEYLC-NNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
++ M+ +K
Sbjct: 422 AFELLKIMLRRK 433
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L AE Q++K V P + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDP--TALNTLIRGHSQEGSPDSAFELLKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
M V AYN+++ + K+ E +AK ++ M+ P+ + +++
Sbjct: 429 MLRRKVDSEKSAYNSLVQSYLKRNEPADAKAALDSMIENDHLPDSALFRSVM 480
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 173/336 (51%), Gaps = 11/336 (3%)
Query: 137 GNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
GN++ A+ +F ++++ L +++N L+ L + + A F ++ E P +
Sbjct: 234 GNLEDALAYF---DELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKM-SERRCFPTL 289
Query: 195 STYTTMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
TYT+++ G+ K+G ++ A K+ + + P+ + Y ++I+G CK G +EE + +
Sbjct: 290 FTYTSLVDGFLKLGRLDEALLQLKEAVERGFI-PDAVTYTSIIDGLCKLGRVEEGCERFH 348
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
EM NRG P+ +TY A+I G + +A + +M +G + T+ +L GLC G
Sbjct: 349 EMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAG 408
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ +A + E V +Y +++GFC G A+ L + M RG +P + S+N
Sbjct: 409 RVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYN 468
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ R L G+L +A +++ Q P+ ++N+ + GLC + D +L + M+
Sbjct: 469 IIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVS 528
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G + + YS L+ G C G +E ++I HEMV++
Sbjct: 529 QGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSR 564
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 143/279 (51%), Gaps = 6/279 (2%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
D T ++ G CK G ++ A + D M P+++A+ +ING C++ L+EA +
Sbjct: 8 DTRVCTALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERA 67
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ GC P+ +TYN I GLC RVD+A L+ KM T+ +++ GL G+
Sbjct: 68 VRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 127
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D+A+ L ++E +P +K+Y VVI+G K G+ +EA + +M G +P F + A+
Sbjct: 128 DEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTAL 187
Query: 373 FRILVENGELDRAILLLKQMPQMDCL----PNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
L + G+LD A++ L QM + C P+ V +N +I LC A G ++D D +
Sbjct: 188 ISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLC-ASGNLEDALAYFDEL 246
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
S FT ++ L+ C+ E + +M ++
Sbjct: 247 DDSLDLTHFT-FNPLVAALCKAERTEEAIAFVKKMSERR 284
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 168/365 (46%), Gaps = 46/365 (12%)
Query: 146 FHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
F K+++ CL +Y +L+ L++ + A Q+V E P + TYT +I
Sbjct: 96 FQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMV-EKGNSPTLKTYTVVID 154
Query: 203 GYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC-- 257
G K G +E A+++F M +P+ Y +I+G K G+L+EA +N+M+ GC
Sbjct: 155 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCAR 214
Query: 258 --RPNELTYNAMIYGLCING----------------------------------RVDEAK 281
P+ + +N +I LC +G R +EA
Sbjct: 215 GVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAI 274
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+ KM + T+ S++ G +G+ D+A+ L+ +E PD +Y +I+G
Sbjct: 275 AFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGL 334
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK+G+ +E EMR RG +P ++ A+ ++ + +A + +QM Q + +
Sbjct: 335 CKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVST 394
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
V+YN I+ GLC A GR+ + M G YS L+ G+C EGNV +++
Sbjct: 395 VTYNIILDGLCKA-GRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFR 453
Query: 462 EMVTK 466
M+ +
Sbjct: 454 RMLDR 458
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 138/279 (49%), Gaps = 9/279 (3%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
PD TY I G CK +++A ++ M K P + Y +++G K G L+EA
Sbjct: 74 PDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAI 133
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +M+ +G P TY +I GL GRV+EA+ + M NG + + + +++ GL
Sbjct: 134 LEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAK 193
Query: 309 VGKFDQAVGYLRNVME----ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
+GK D+A+ YL ++E + PDV + +VI C G ++A++ E+ L
Sbjct: 194 IGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELD-DSLDL 252
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
T F+FN + L + + AI +K+M + C P +Y +++ G + GR+ +
Sbjct: 253 THFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGF-LKLGRLDEALLQ 311
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ + G D Y+ ++ G C+ G VE + HEM
Sbjct: 312 LKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 350
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 159/336 (47%), Gaps = 15/336 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFI------SKLIKAYGDRGNVKAAIFWFHQ 148
YT++ D L L + +LL+ + FI + +I G V+ FH+
Sbjct: 292 YTSLVDGFLK--LGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHE 349
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
+ +Y +L+ ++ I A + Q+++ V V TY ++ G CK G
Sbjct: 350 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV-TYNIILDGLCKAG 408
Query: 209 MIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+ A F M + ++ Y+ +++GFC +G + A + M++RGC PN ++YN
Sbjct: 409 RVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYN 468
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV-VGKFDQAVGYLRNVME 324
+I GLC G++ +A K+ +V T S L GLC + V +++
Sbjct: 469 IIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVS 528
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+P++ SY ++++G C+ G + + + EM +RG+ P V FN + R L G +D
Sbjct: 529 QGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDE 588
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
A+ + +++ + P+ SY +++ L + RM++
Sbjct: 589 ALEVFRELERRSA-PDAWSYWSLLDALSRCE-RMEE 622
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 41/251 (16%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ + GNV AA+ F + L SYN ++ L R + A +F ++++
Sbjct: 433 SALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQ 492
Query: 187 ENVVPPDVSTYTTMIRGYC-KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ P DV T+ + + G C ++ + + ++F+ M PNL +Y+ +++G C+ G L
Sbjct: 493 RRLCP-DVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGL 551
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E + +EM++RG P+ + +N +I LCI GRVDEA L F++
Sbjct: 552 EVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEA--------LEVFRE-------- 595
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+E PD SY +++ + + +EA L M+ +G
Sbjct: 596 --------------------LERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGC 635
Query: 363 KPTVFSFNAVF 373
P + F
Sbjct: 636 APRHYDLTVRF 646
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 178/337 (52%), Gaps = 14/337 (4%)
Query: 136 RGN-VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
RGN V A+ +F + + S+N L+ L R+ + A E F+++ + PDV
Sbjct: 214 RGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEM-RGFGCSPDV 272
Query: 195 STYTTMIRGYCKMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
TY T+I G+C++ ++ K++ + P+++ Y ++I+G+CK G++E+A N
Sbjct: 273 ITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFN 332
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
M++ G +PN T+N +I G G + A+ + +M L G ++ T S++ G C G
Sbjct: 333 NMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTG 392
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
K ++++ + N++P+ ++ ++ N CK + EA L++++ R + F +N
Sbjct: 393 KVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYN 452
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
V + G +D A ++L +M + C P+ ++Y +I G CM KGR+ + + +RM+
Sbjct: 453 PVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCM-KGRLSEAISIFNRMLG 511
Query: 431 SGHNLD----FTMYSCLLK-GYCEEGNVENVMQIAHE 462
+G D ++ SCLLK G E +MQIA E
Sbjct: 512 TGCAPDSITMTSLISCLLKAGMPNEA--YRIMQIASE 546
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 148/295 (50%), Gaps = 5/295 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+ G V A F++ + + +YN+L+ RVN + + +++ +N
Sbjct: 243 LIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKN 302
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ PDV TYT++I GYCK+G +E A +F+ M +KPN +N +INGF K G++ A
Sbjct: 303 DLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSA 362
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ EM+ GC P+ +T+ ++I G C G+V+ + L ++ N T +
Sbjct: 363 ENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNA 422
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + +A G+LR++ ++ Y VI+GFCK G DEA +L EM + KP
Sbjct: 423 LCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPD 482
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
++ + G L AI + +M C P+ ++ ++I C+ K M +
Sbjct: 483 KITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLIS--CLLKAGMPN 535
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 192/428 (44%), Gaps = 50/428 (11%)
Query: 46 LDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYT----AITDV 101
LD FS L +I +V+ NP AL FF S N N H+ Y+ +++++
Sbjct: 95 LDYFSKTLTPSIAFEVVRGLNNPELALKFFQL-SRVNLN---LCHSFRTYSFLLRSLSEM 150
Query: 102 LLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSY 161
S ++ + + + + L+ + D G A W + L Y
Sbjct: 151 GFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWVDGVE-----FSLVVY 205
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N LL LVR N + A FF + +MG+ FD +
Sbjct: 206 NKLLNQLVRGNQVDEAVCFFRE----------------------QMGL----HGPFDSCS 239
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
+N +I G C+ G++++A + NEM GC P+ +TYN +I G C VD
Sbjct: 240 -------FNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGH 292
Query: 282 MLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
L+ ++ N +V T+ S++ G C +GK ++A N++ + + P+ ++ ++ING
Sbjct: 293 DLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILING 352
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
F K+G A ++ +EM G P + +F ++ G+++R++ L ++ + PN
Sbjct: 353 FGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPN 412
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT-MYSCLLKGYCEEGNVENVMQI 459
++ + LC + R+ + + R ++ H + MY+ ++ G+C+ GNV+ I
Sbjct: 413 EYTFAILTNALC-KENRLHEARGFL-RDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVI 470
Query: 460 AHEMVTKK 467
EM K+
Sbjct: 471 LAEMEEKR 478
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 185/358 (51%), Gaps = 6/358 (1%)
Query: 110 IAASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
AA L + SD ++ S LI AY + G ++ A + ++ + + +L L
Sbjct: 41 FAAILETKGTQRSDIYVFSGLITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHL 100
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPN 225
+++ KL F+ +I+ E P + + ++ +CK G I A+ VF+ +T ++P+
Sbjct: 101 MKLKYFKLVWGFYEEIL-ECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPS 159
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++++NT++NG+ + G+++E + N M G +P+ TY+ +I GLC ++D+A +
Sbjct: 160 VVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFD 219
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M G N T +++ G C G+ D A+ + ++ ++ PD+ +Y +I G CK G
Sbjct: 220 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKG 279
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+A L+ EM +GLKP ++ + + G+L+ A K+M Q + V+Y
Sbjct: 280 DLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYT 339
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I GLC + R D E ++ M+ G D Y+ ++ +C++G+V ++ EM
Sbjct: 340 ALISGLCQEE-RYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 125/209 (59%), Gaps = 14/209 (6%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y+ L+ L + + + A E F +++ + +VP V T+TT+I G+CK G ++ A +++
Sbjct: 195 VYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIY 253
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++ P+L+ YNT+I G CKKG+L++A ++EM +G +P+++TY +I G C
Sbjct: 254 KQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKE 313
Query: 275 GRVDEA-----KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G ++ A +M+ +RL D+V+ + +++ GLC ++ A LR ++ + P
Sbjct: 314 GDLETAFEHRKRMIQEXIRL----DDVA-YTALISGLCQEERYLDAEKVLREMLSVGLKP 368
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMR 358
D +Y ++IN FCK G LLKEM+
Sbjct: 369 DTGTYTMIINEFCKKGDVWTGSKLLKEMQ 397
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 184/367 (50%), Gaps = 15/367 (4%)
Query: 107 LISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE-NGACLYSY 161
L+ +A+LL ++ ++ + +KL+ + RG V + F + Q ++S+
Sbjct: 195 LLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSF 254
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
N ++ + RV ++ A E ++ E PD T+ ++ G C+ + +V +
Sbjct: 255 NVVIKGVCRVGQVQKALELVERM-NEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQ 313
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
PN++ + ++I+G+CK G+LE+A N+M+ G PN +TYN +I G G +
Sbjct: 314 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDL 373
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A + +M +V T S++ G C G+ D A+ ++ + + P+V ++ ++
Sbjct: 374 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 433
Query: 338 INGFCKIGKSDEAISLLKEMRAR-GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
I+ CK +SDEAI LL E+ R + P F +N V +L + G++D A L+ K M +
Sbjct: 434 IHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 493
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG---NV 453
C P+ +Y +I G CM K R+ + M+ +G + D +C + + G V
Sbjct: 494 CRPDKYTYTILIIGYCM-KSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEV 552
Query: 454 ENVMQIA 460
++VM++A
Sbjct: 553 DHVMRLA 559
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 155/311 (49%), Gaps = 6/311 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN L+ L+ + F + +++ V PDV ++ +I+G C++G ++ A ++ +
Sbjct: 216 YAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVE 275
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLCIN 274
M P+ + +N +++G C+ E+ + + + G C PN +T+ ++I G C
Sbjct: 276 RMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKA 335
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++++A + M +G N T+ ++ G VG AV + + PDV ++
Sbjct: 336 GKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTF 395
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP- 393
+I+G+C+ G+ D+A+ + +M ++P V++F+ + L + D AI LL ++
Sbjct: 396 SSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNL 455
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ D P YN +I LC G++ + + M G D Y+ L+ GYC + +
Sbjct: 456 RPDIAPQAFIYNPVIDVLCKC-GKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRI 514
Query: 454 ENVMQIAHEMV 464
+ HEMV
Sbjct: 515 SEAIMFFHEMV 525
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 180/409 (44%), Gaps = 40/409 (9%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
Y A+ + I A L ++ + L+K G + + + K++
Sbjct: 84 YAALIEGFCETGRIDEAVELFGEMDQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGW 143
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
+Y +++ K AEE ++ ++ + P V T T +I YCK G + +A
Sbjct: 144 RPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPC-VVTCTAVINAYCKEGRMSDAL 202
Query: 215 KVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN----------- 260
+V ++M + KPN+ YN ++ GFC +G++ +A +N+M G P+
Sbjct: 203 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQ 262
Query: 261 ------------------------ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ TYNA+I LC +GR D+A L + G K N
Sbjct: 263 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 322
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T S++ GLC GK D A +L ++ A PD +Y I CK+ S E +S + E
Sbjct: 323 VTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 382
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M + +KP+ ++ V L++ +M C P+ V+Y T + C+ +G
Sbjct: 383 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI-EG 441
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
R+ + E+++ M ++G +D Y+ L+ G+ G ++ + I +M +
Sbjct: 442 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS 490
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 162/343 (47%), Gaps = 38/343 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++NSL+ R N + +A + F ++ DV +Y +I G+C+ G I+ A ++F
Sbjct: 47 YTFNSLIVGYCRTNQVDVARDLFDKMPLRGFA-QDVVSYAALIEGFCETGRIDEAVELFG 105
Query: 219 VMTVKPNLLAYNTMINGFCKKGELE----------------------------------- 243
M +P++ Y ++ G CK G E
Sbjct: 106 EMD-QPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAK 164
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA++ + EM +G P +T A+I C GR+ +A ++ M+L G K NV T+ +++
Sbjct: 165 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 224
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+G C GK +A+ L + +NPD +Y ++I G C G + A LL+ M GL
Sbjct: 225 QGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 284
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+++NA+ L ++G D+A L + PN V++N++I GLC + G++
Sbjct: 285 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKS-GKVDIAWK 343
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+++M+ +G D YS ++ C+ + + EM+ K
Sbjct: 344 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 386
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 145/271 (53%), Gaps = 8/271 (2%)
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY +IR C+ + +A + +M +P+ +N++I G+C+ +++ A+ ++M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
RG + ++Y A+I G C GR+DEA L +M + ++ + +++KGLC G+
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
++ + LR + E P ++Y V++ C K+ EA +L+EM +GL P V + AV
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ G + A+ +L+ M C PN +YN ++ G C +G++ L+++M G
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC-NEGKVHKAMALLNKMRVCG 247
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
N D Y+ L++G C +G++E+ ++ M
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 278
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 170/395 (43%), Gaps = 63/395 (15%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I AY G + A+ K +++YN+L+ + A +++ +
Sbjct: 186 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKM-R 244
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
V PD TY +IRG C G IE+A ++ +M + + YN +IN CK G +
Sbjct: 245 VCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 304
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + + RG +PN +T+N++I GLC +G+VD A + KM G + T+ S +
Sbjct: 305 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFI 364
Query: 304 KGLCVVGKFDQAVGYLRNVMEANM-----------------------------------N 328
+ LC + + + ++ +++ ++ N
Sbjct: 365 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 424
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PDV +Y + +C G+ +EA ++L EM G+ ++N + G+ D A+ +
Sbjct: 425 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 484
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED--------------------LVDRM 428
LKQM + +PN +Y ++ L RM+ VED L D M
Sbjct: 485 LKQMTSVASVPNQFTYFILLRHLV----RMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM 540
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ + YS +L+G+ E+G E + M
Sbjct: 541 KKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLM 575
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 142/312 (45%), Gaps = 56/312 (17%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D TY +I CK G + A +FD + +KPN + +N++ING CK G+++ A K +
Sbjct: 286 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFL 345
Query: 250 NEMMNRGCRPNELTYNAMIYGLC------------------------INGRVDEAKML-- 283
+M++ GC P+ TY++ I LC +N + K+L
Sbjct: 346 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 405
Query: 284 ---------MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+M +G +V T+ + ++ C+ G+ ++A L + + + D +Y
Sbjct: 406 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 465
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV----------------- 377
+++G IG++D A+S+LK+M + P F++ + R LV
Sbjct: 466 NTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVW 525
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ EL L M + + LPN +Y++I+ G GR ++ LV M +L+
Sbjct: 526 KAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS-EDGRTEEATSLVSLMKEDSISLNE 584
Query: 438 TMYSCLLKGYCE 449
+Y+ L+ +C+
Sbjct: 585 DIYTALVTCFCK 596
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 22/241 (9%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PDV TYTT +R YC G + A+ V M+ V + +AYNT+++G G+ + A
Sbjct: 425 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 484
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM------------------LMAKMRLN 290
+ +M + PN+ TY ++ L + R+ E + L M+ N
Sbjct: 485 LKQMTSVASVPNQFTYFILLRHL-VRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKN 543
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
F N T+ S+L+G G+ ++A + + E +++ + Y ++ FCK + +A
Sbjct: 544 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDA 603
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
L+ M G P + S+ + L+ G+ D+A + D P+ + + II G
Sbjct: 604 WVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDG 663
Query: 411 L 411
L
Sbjct: 664 L 664
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 24/224 (10%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV--- 216
+YN+L+ + A Q+ VP TY ++R +M ++E+ +
Sbjct: 464 AYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF-TYFILLRHLVRMRLVEDVLPLTPA 522
Query: 217 --------------FDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
FDVM PN Y++++ GF + G EEA ++ M
Sbjct: 523 GVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISL 582
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
NE Y A++ C + R +A +L+ M +GF ++ +++ +L GL G+ D+A
Sbjct: 583 NEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIF 642
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSD---EAISLLKEMRAR 360
N + +PD ++V+I+G K G SD E I +L+ M R
Sbjct: 643 MNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCR 686
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 163/336 (48%), Gaps = 43/336 (12%)
Query: 150 KQIENGA---CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
K++E+G + +Y L+ L I E F +I ++NV DV Y+ +I YC+
Sbjct: 192 KEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAG-DVYFYSAVINAYCR 250
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G + A +VFD ++PN Y +INGFCK G++E A+ + +M RG N++
Sbjct: 251 AGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQII 310
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA-------- 315
+N MI G C +G VD+A + A M G + +V T+ ++ GLC V + + A
Sbjct: 311 FNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMT 370
Query: 316 --------VGY-------------------LRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
V Y R++ P V +Y V+I+G+ K G
Sbjct: 371 ENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIR 430
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
EA KEM +GL P V+++ A+ NG++D A+ L ++M Q PN V+Y +I
Sbjct: 431 EAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALI 490
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
GL +GR ++ D M+ +G D T+YS L+
Sbjct: 491 SGLA-KEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 156/330 (47%), Gaps = 12/330 (3%)
Query: 91 TTPCYTAITDVLLSHSLISIAASL---LKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWF 146
T YT + D L + IS S+ +K N D +F S +I AY GNV+ A F
Sbjct: 202 TVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVF 261
Query: 147 HQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
+ + NG +Y +L+ ++ I+ AE + V + + TMI GY
Sbjct: 262 DEC--VGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQI-IFNTMIDGY 318
Query: 205 CKMGMIENA---KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
C+ GM++ A K V + M ++ ++ YNT+ G C+ +E+AKK ++ M G N
Sbjct: 319 CRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNY 378
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
++Y +I G + EA+ L M G + +V T+ M+ G G +A + +
Sbjct: 379 VSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKE 438
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ + + PDV +Y +++G C GK D A+ L +EM+ RG KP V ++ A+ L + G
Sbjct: 439 MEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGR 498
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+ A M P+ Y+ ++ L
Sbjct: 499 SEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 113/195 (57%), Gaps = 4/195 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+YN+L L RVN ++ A++ H I+ EN V + +YTT+I + K G + A+++F
Sbjct: 343 VYTYNTLACGLCRVNRMEDAKKLLH-IMTENGVESNYVSYTTLISIHSKEGDMVEARRLF 401
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P+++ YN MI+G+ K G + EA++ EM +G P+ TY A+++G C+N
Sbjct: 402 RDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVN 461
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+VD A L +M+ G K NV + +++ GL G+ ++A + N++ A + PD Y
Sbjct: 462 GKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLY 521
Query: 335 EVVINGFCKIGKSDE 349
+++ + DE
Sbjct: 522 SMLVGSLHTDKRKDE 536
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 139/277 (50%), Gaps = 4/277 (1%)
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
+ + ++ G+CK G +++A+++ D M VK N YN +++ + ++ + + EM
Sbjct: 135 SASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEM 194
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ G P TY ++ GL G + + + + +++ +V + +++ C G
Sbjct: 195 ESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNV 254
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+A + + P+ ++Y +INGFCKIG+ + A LL +M+ RG+ FN +
Sbjct: 255 RRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTM 314
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+G +D+A+ + M +M + +YNT+ CGLC RM+D + L+ M +G
Sbjct: 315 IDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVN-RMEDAKKLLHIMTENG 373
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
++ Y+ L+ + +EG++ ++ +M K R
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSR 410
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 203/453 (44%), Gaps = 26/453 (5%)
Query: 41 ISSQPLDQFSLCLGSNI---------VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHT 91
+ SQ + LCLG+N + ++ E+ P A F FN P T
Sbjct: 37 VDSQIQSRCLLCLGNNSCGTVRSRTKLMNILVERGKPQEAQFIFNSLVEQGHRP-----T 91
Query: 92 TPCYTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFH 147
T YTA+ L + LL K ++ +I A+ + GNVK A+ F
Sbjct: 92 TVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQ 151
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ ++ ++N+L+ + + + + + + + P+ TY ++ CK
Sbjct: 152 KMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKK 211
Query: 208 GMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
I+ A V M V+P+++ YNT+ + + GE +A+ + +M+N+ PNE T
Sbjct: 212 KSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTC 271
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
++ G C G + EA ++ +MR G N+ S++KG +G D L + E
Sbjct: 272 GIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEE 331
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ + PDV ++ ++NG+ G+ D+ + +M G++P + F+ + + V GE +
Sbjct: 332 SGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVK 391
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A LL M + PN V + TII G C A G+M+ + + M + + + L+
Sbjct: 392 AESLLNFMSKYGVRPNVVIFTTIISGWCTA-GKMEKAWKVFEHMCDMDVSPNLKTFETLI 450
Query: 445 KGYCEEGN---VENVMQIAHEM-VTKKGRLLKL 473
GY E E ++Q+ EM V + LKL
Sbjct: 451 WGYGEAKQPWRAEEILQMMEEMNVVPENSTLKL 483
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 157/339 (46%), Gaps = 22/339 (6%)
Query: 15 PDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFF 74
P++S+ + + + L P N + +++ +G+ K I E N H +
Sbjct: 178 PEESMKLLELMTRTTNLKPNNRT-----------YNILVGALCKKKSIKEAWNVVHQML- 225
Query: 75 FNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYG 134
AS P+ Y+ Y + + S+I + N N+ + I + Y
Sbjct: 226 ---ASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGII---VGGYC 279
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDV 194
++GN+ A+ ++ + + L +NSL+ + + ++ +++E+ V PDV
Sbjct: 280 EQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKAL-TMMEESGVKPDV 338
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNE 251
T++T++ G+ G ++ +++FD M ++P++ ++ + GF + GE +A+ +N
Sbjct: 339 ITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNF 398
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M G RPN + + +I G C G++++A + M N+ T ++++ G +
Sbjct: 399 MSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQ 458
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
+A L+ + E N+ P+ + ++V + IG ++A
Sbjct: 459 PWRAEEILQMMEEMNVVPENSTLKLVSEAWRSIGMVNDA 497
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAK 246
V P+V +TT+I G+C G +E A KVF+ M V PNL + T+I G+ + + A+
Sbjct: 404 VRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWRAE 463
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
+ + M P T + G V++AK
Sbjct: 464 EILQMMEEMNVVPENSTLKLVSEAWRSIGMVNDAK 498
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 165/312 (52%), Gaps = 11/312 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N L+ R I A E ++ P+V TY+T++ G C+ G ++ A ++F+ M
Sbjct: 276 FNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEM 335
Query: 221 TVK----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
K P+ L YN +INGFC++G+ + A+ + M N GC PN Y+A++ GLC G+
Sbjct: 336 VSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGK 395
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ +AK ++A+M+ +G K + T+ S++ G+ D+A+ L + E + D ++ V
Sbjct: 396 LQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNV 455
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ G C+ G+ DEA+ +++++ +G+ S+ V L +N EL +A LL M
Sbjct: 456 ILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRG 515
Query: 397 CLPNFVSYNTIICGLC---MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+P++ + N ++ LC MA + DLVD + H+ + L+ C + +
Sbjct: 516 FVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHD----SWELLIDLICRDRKL 571
Query: 454 ENVMQIAHEMVT 465
V ++ E+VT
Sbjct: 572 LYVFELLDELVT 583
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 198/444 (44%), Gaps = 15/444 (3%)
Query: 31 LNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHH 90
L P+ P I + S + ++ +I + +P HAL FN S ++H
Sbjct: 109 LEPKLDPPPEIVVAETRKKSKYITHDVAINLIKREKDPQHALKIFNMVS----EQKGFNH 164
Query: 91 TTPCYTAITDVLLS----HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWF 146
Y I L ++ + + + K + L+K Y G + F
Sbjct: 165 NNATYATILQKLAQFKKFQAVDRVLHQMTYEACKFHEGVFINLMKHYSKCGFHEKVFDAF 224
Query: 147 HQAKQI-ENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+ I + +S L +LV N + L + + V P+V + +++ +C
Sbjct: 225 LSIQTIVREKPSPKAISSCLNLLVDSNQVDLVRKLLLYAKRSLVYKPNVCIFNILVKYHC 284
Query: 206 KMGMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPN 260
+ G I++A +V M PN++ Y+T+++G C+ G L+EA + EM+++ P+
Sbjct: 285 RRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPD 344
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
LTYN +I G C G+ D A+ ++ M+ NG NV + +++ GLC GK A G L
Sbjct: 345 PLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLA 404
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ + + PD +Y +IN F + G+ DEAI LL EM+ + +FN + L G
Sbjct: 405 EMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREG 464
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
D A+ +++++PQ N SY ++ L ++ L+ M+ G +
Sbjct: 465 RFDEALDMIEKLPQQGVYLNKGSYRIVLNSL-TQNCELRKANKLLGLMLSRGFVPHYATS 523
Query: 441 SCLLKGYCEEGNVENVMQIAHEMV 464
+ LL C+EG + ++V
Sbjct: 524 NELLVRLCKEGMANDAATALFDLV 547
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 163/310 (52%), Gaps = 11/310 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLY----SYNSLLGVLVRVNSIKLAEEFFHQI 184
L+K + RG++ +A F K++ N Y +Y++L+ L R +K A E F ++
Sbjct: 279 LVKYHCRRGDIDSA---FEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEM 335
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
V ++ + PD TY +I G+C+ G + A+ V + M PN+ Y+ +++G CK G+
Sbjct: 336 VSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGK 395
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L++AK + EM + G +P+ +TY ++I NG++DEA L+ +M+ N + + T
Sbjct: 396 LQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNV 455
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L GLC G+FD+A+ + + + + + SY +V+N + + +A LL M +RG
Sbjct: 456 ILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRG 515
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P + N + L + G + A L + M P S+ +I +C + ++ V
Sbjct: 516 FVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLIDLICRDR-KLLYV 574
Query: 422 EDLVDRMIRS 431
+L+D ++ S
Sbjct: 575 FELLDELVTS 584
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 174/372 (46%), Gaps = 45/372 (12%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
SKL+ N I FH + G LY+YN ++ L R + +A +++K
Sbjct: 73 SKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMK 132
Query: 187 ENVVPPDVSTYTTMIRGYCK----MGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGEL 242
PDV T +++I G+C+ G ++ K+ + M K +++ YNT+I+GFCK G +
Sbjct: 133 FGY-EPDVVTVSSLINGFCQGNRVFGAVDLVSKM-EEMRCKLDVVIYNTIIDGFCKTGLV 190
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM--------------R 288
A M G R + +TYN+++ GLC +GR +A LM M
Sbjct: 191 NNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTAL 250
Query: 289 LNGF---------------------KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+N F +V T+ SM+ GLC+ G+ D+A L ++
Sbjct: 251 INAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGC 310
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PDV +Y +INGFCK + DE L++EM RGL +FN + + + G D A
Sbjct: 311 FPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQE 370
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+ +M PN +Y+ ++ GLC R++ L + M +S LD T Y+ ++ G
Sbjct: 371 IFSRMGSR---PNIRTYSILLYGLCY-NWRVEKALVLFESMQKSEMELDITTYNIVIHGM 426
Query: 448 CEEGNVENVMQI 459
C GNVE+ +
Sbjct: 427 CMIGNVEDAWDL 438
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 175/346 (50%), Gaps = 8/346 (2%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+S+ ++K + +S LI + V A+ + +++ + YN+++
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDG 183
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---P 224
+ + A F ++ ++ V D TY +++ G C G +A ++ M ++ P
Sbjct: 184 FCKTGLVNNALVLFGRMERDGV-RADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVP 242
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N++ + +IN F ++G+ EAKK EM+ R P+ TYN+MI+GLC++G+VDEAK ++
Sbjct: 243 NVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQIL 302
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G +V T+ +++ G C + D+ +R + + + D ++ +I G+ +
Sbjct: 303 DLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQA 362
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G+ D A + M G +P + +++ + L N +++A++L + M + + + +Y
Sbjct: 363 GRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTY 419
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
N +I G+CM G ++D DL + G D Y+ ++ G+C +
Sbjct: 420 NIVIHGMCMI-GNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRK 464
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 135/243 (55%), Gaps = 7/243 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +L+ VR A++F+ ++++ + PDV TY +MI G C G ++ AK++ D+
Sbjct: 246 TFTALINAFVREGKFLEAKKFYEEMIRR-CIDPDVFTYNSMIHGLCMHGQVDEAKQILDL 304
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ YNT+INGFCK ++E K + EM RG + +T+N +I G GR
Sbjct: 305 MVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGR 364
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+ + ++M G + N+ T+ +L GLC + ++A+ ++ ++ M D+ +Y +
Sbjct: 365 PDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNI 421
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G C IG ++A L + +GL+P V ++ + D+A L ++M +
Sbjct: 422 VIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDG 481
Query: 397 CLP 399
LP
Sbjct: 482 LLP 484
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 181/360 (50%), Gaps = 9/360 (2%)
Query: 114 LLKNSNKLSDFFISKLI-KAYGDRG---NVKAAIFWFHQAKQIENGACLYSYNSLLGVLV 169
LL+ N+++ FIS+ +A+ + N+ AI F Q + ++ LL +
Sbjct: 21 LLEKGNRVTAPFISRFWGRAFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIA 80
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNL 226
+ + L FH + + + D+ TY +I C+ A V M +P++
Sbjct: 81 KSKNYDLVISLFHNM-EICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDV 139
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
+ +++INGFC+ + A +++M C+ + + YN +I G C G V+ A +L +
Sbjct: 140 VTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGR 199
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M +G + + T+ S++ GLC G+ A +R+++ ++ P+V ++ +IN F + GK
Sbjct: 200 MERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGK 259
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
EA +EM R + P VF++N++ L +G++D A +L M C P+ V+YNT
Sbjct: 260 FLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNT 319
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+I G C K R+ + LV M + G +D ++ +++GY + G + +I M ++
Sbjct: 320 LINGFCKTK-RVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR 378
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 143/278 (51%), Gaps = 5/278 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMINGFCKKGELEEA 245
V PDV Y T+I G CK+G + + + M + P+ + YN +I+GFCK GE+E+
Sbjct: 379 VEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKG 438
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K+ +EM G PN +T N ++ G+C GRV A + + G K + T+ +++
Sbjct: 439 KELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINA 498
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C V F++A+ ++++ +PD Y +I+GF + G+ +A +L E++ G++P
Sbjct: 499 FCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPD 558
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+N + + R +LK+M + P+ ++YNT+I G ++ + ++
Sbjct: 559 TVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLI-AYASKNGDLKFAQKVM 617
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+MI++G Y ++ YC GN M+I +M
Sbjct: 618 RKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDM 655
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 152/309 (49%), Gaps = 6/309 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
+YN L+ + I+ +E F ++ KE V P +V T T++ G C+ G + +A F
Sbjct: 421 TYNCLIDGFCKAGEIEKGKELFDEMNKEGVAP-NVVTVNTLVGGMCRTGRVSSAVNFFVE 479
Query: 218 -DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+K + + Y +IN FC E+A + NEM+ GC P+ + Y +I G GR
Sbjct: 480 AQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGR 539
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ +A ++A+++ G + + + +++ G C KF + L+ + EA + PD +Y
Sbjct: 540 MADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNT 599
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I K G A ++++M G+ PTV ++ AV NG + A+ + K M
Sbjct: 600 LIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAAS 659
Query: 397 CL-PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ PN V YN +I LC +++ L++ M G + T Y+ + KG +E ++E
Sbjct: 660 KVPPNTVIYNILINSLC-KNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEK 718
Query: 456 VMQIAHEMV 464
V + M+
Sbjct: 719 VFEFMDRMI 727
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 142/306 (46%), Gaps = 3/306 (0%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ L +V + ++ + PD TY +I G+CK G IE K++FD M
Sbjct: 386 YNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEM 445
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V PN++ NT++ G C+ G + A E RG + + +TY A+I C
Sbjct: 446 NKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNF 505
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
++A L +M +G + + +++ G G+ A L + + + PD Y +
Sbjct: 506 EKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTL 565
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I GFC+ K +LKEM GLKP ++N + +NG+L A ++++M +
Sbjct: 566 IGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGV 625
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P +Y +I C+ + +E D S + +Y+ L+ C+ V++ +
Sbjct: 626 VPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAV 685
Query: 458 QIAHEM 463
+ +M
Sbjct: 686 SLMEDM 691
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 160/304 (52%), Gaps = 6/304 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
++ L+ G V +A+ +F +A++ +Y +L+ VN+ + A E F++++
Sbjct: 457 VNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEML 516
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGEL 242
K PD Y T+I G+ + G + +A V + ++P+ + YNT+I GFC+ +
Sbjct: 517 KSGC-SPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKF 575
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ + EM G +P+ +TYN +I NG + A+ +M KM G V+T+ ++
Sbjct: 576 HRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAV 635
Query: 303 LKGLCVVGKFDQAVGYLRNVMEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+ C+ G ++A+ +++ A+ + P+ Y ++IN CK K A+SL+++M+ G
Sbjct: 636 INAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWG 695
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P ++NA+F+ L + +L++ + +M + C P++++ I+ A G ++ +
Sbjct: 696 VTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITME-ILTEWLSAVGEIERL 754
Query: 422 EDLV 425
+ V
Sbjct: 755 KKFV 758
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/374 (19%), Positives = 144/374 (38%), Gaps = 91/374 (24%)
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-DVMTVKPNLLAYNTMINGFCKK 239
++ KE +P V+ + ++R + ++E + +F D+ N N ++ +
Sbjct: 144 LYKTSKELNIPLTVNAASFLLRASGRSELVEESLILFNDLDPSVKNTYLRNVWLSILLRS 203
Query: 240 GELEEAKKCMNEMM----NRGCRPNELTYN------------------------------ 265
G +++A K ++EM + CRPN+ T +
Sbjct: 204 GRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGE 263
Query: 266 -----------AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+I LC N + + L +M G + S+L GL G F++
Sbjct: 264 HGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNR 323
Query: 315 AVGYLRNVMEANMNPDVKSYEVVIN----------------------------------- 339
+ ++E ++ P+V ++ ++IN
Sbjct: 324 MNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDV 383
Query: 340 --------GFCKIGKSDEAISLLKEMRA-RGLKPTVFSFNAVFRILVENGELDRAILLLK 390
G CK+G+ E + L++ MR+ +G P ++N + + GE+++ L
Sbjct: 384 VIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFD 443
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M + PN V+ NT++ G+C GR+ + R G D Y+ L+ +C
Sbjct: 444 EMNKEGVAPNVVTVNTLVGGMCRT-GRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNV 502
Query: 451 GNVENVMQIAHEMV 464
N E M++ +EM+
Sbjct: 503 NNFEKAMELFNEML 516
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
A E F + + VPP+ Y +I CK +++A + + M V PN YN +
Sbjct: 648 AMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIF 707
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
G + +LE+ + M+ M+ C P+ +T + L G ++ K +A
Sbjct: 708 KGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVA 759
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 221/512 (43%), Gaps = 62/512 (12%)
Query: 4 PRRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLD----QFSLCLGSNIVT 59
P L++I+ P Q + + I L P ++ S+ LD +F + L N V+
Sbjct: 9 PFNDLSDIASKPPQDLKPSPWVHQIMSLLLDGPV--DMESR-LDLFCNKFLIKLSPNFVS 65
Query: 60 KVIYE---QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
V+ Q P AL FF WA KY H CY + DVL + + S+
Sbjct: 66 FVLKSMELQKRPDLALKFFTWAGKQK----KYTHNLQCYVSSIDVLAINGDLDNVKSVFC 121
Query: 117 NSNKLSDFF----ISKLIKAYGDRGNVKAAIFWFHQAKQIENGA--CLYSYNSLLGVLVR 170
+ + LIK++G G V+ ++ + K ENG L++YN LL LV
Sbjct: 122 KFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMK--ENGVEPSLFTYNFLLNGLVN 179
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLL 227
I+ AE ++++ + PDV TY TMI+GYC++G + A + F ++ V P+ +
Sbjct: 180 SVFIESAERVL-EVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKI 238
Query: 228 -----------------------------------AYNTMINGFCKKGELEEAKKCMNEM 252
AY+ +I G CK+G+ E +M
Sbjct: 239 TYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKM 298
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ +GC+ N Y A+I G + EA +L +M+ G + +V T+ ++ +C G+
Sbjct: 299 IQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRL 358
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D+A+ YL + + Y +I+G K G+ EA L +EM +G P + +NA+
Sbjct: 359 DEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNAL 418
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L + G+ D A+ K+M C +Y +I GL + + ++ + D MI G
Sbjct: 419 IDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGL-FREHKNEEALKMWDMMIDKG 477
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ L G C G V ++ E+
Sbjct: 478 ITPTAAAFRALSIGLCLSGKVARACKLLDELA 509
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 170/341 (49%), Gaps = 10/341 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI+A G+ + +H+ ENG + ++Y+ ++G L + F ++++
Sbjct: 243 LIQACYAEGDFDLCLSLYHEMD--ENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQ 300
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ +V+ YT +I K G + A +F+ M ++P+++ Y ++N CK G L+
Sbjct: 301 KGC-KVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLD 359
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + + G N + Y+++I GL GRV EA+ L +M G + + +++
Sbjct: 360 EAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALI 419
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
L GK D+A+ + + + + + V +Y ++ING + K++EA+ + M +G+
Sbjct: 420 DALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGIT 479
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
PT +F A+ L +G++ RA LL ++ M +P ++ ++ LC A GR+++
Sbjct: 480 PTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPE-TAFEDMLNVLCKA-GRIKEACK 537
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L D + G + + + L+ + GN + +++ H +
Sbjct: 538 LADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHSKI 578
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 165/351 (47%), Gaps = 6/351 (1%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQA-KQIENGACLYSYNSLLGVLVRVNSIKLAE 178
KLS F+S ++K+ + A+ +F A KQ + L Y S + VL + +
Sbjct: 58 KLSPNFVSFVLKSMELQKRPDLALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNVK 117
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING 235
F + + +VS ++I+ + +GM+E V+ M V+P+L YN ++NG
Sbjct: 118 SVFCKFRGMGFLM-NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNG 176
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
+E A++ + M N P+ +TYN MI G C G+ +A M L +
Sbjct: 177 LVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPD 236
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
T+ ++++ G FD + + E + +Y +VI G CK GK E ++ +
Sbjct: 237 KITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFE 296
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+M +G K V + A+ + G + A+LL ++M + P+ V+Y ++ +C +
Sbjct: 297 KMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKS- 355
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GR+ + + ++ +G ++ +YS L+ G + G V ++ EMV K
Sbjct: 356 GRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKK 406
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 196/417 (47%), Gaps = 11/417 (2%)
Query: 56 NIVTKVIYEQTNPYHALFFFN--WASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAAS 113
N V K++ E +A F+ A PN Y Y + +VL S +
Sbjct: 171 NWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWL---GG 227
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+++ + + +S +++ + ++G V A+++F + ++ L ++ ++ L + S
Sbjct: 228 MIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGS 287
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV----KPNLLAY 229
+K A E ++V P+V T+T +I G CK G E A ++F + KPN+L Y
Sbjct: 288 VKQAFEMLEEMVGRGW-KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTY 346
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
MI+G+C+ ++ A+ ++ M +G PN TY +I G C G + A LM M
Sbjct: 347 TAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNE 406
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
GF NV T+ +++ GLC G+ +A L++ ++ D +Y ++I+ CK + +
Sbjct: 407 EGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQ 466
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A+ L +M G++P + S+ + + + + + ++ + +P +Y ++IC
Sbjct: 467 ALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMIC 526
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G C +G ++ RM G D Y L+ G C++ ++ + M+ K
Sbjct: 527 GYC-REGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEK 582
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 198/434 (45%), Gaps = 93/434 (21%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSN-KLSDFFISKL 129
AL FFNWA +K+ H T Y I+ AASL+ N N + + + +
Sbjct: 95 ALSFFNWA----IASSKFRHFTRLY------------IACAASLISNKNFEKAHEVMQCM 138
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
+K++ + G VK AI +++ +++ LA
Sbjct: 139 VKSFAEIGRVKEAI----------------------EMVIEMHNQGLA------------ 164
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
P T +++ +MG++E A+ +FD M V+PN ++Y M+ G+CK G + E+
Sbjct: 165 --PSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESD 222
Query: 247 KCMNEMMNR-----------------------------------GCRPNELTYNAMIYGL 271
+ + M+ R G RPN + + MI GL
Sbjct: 223 RWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGL 282
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG-YLRNVMEANMNPD 330
C G V +A ++ +M G+K NV TH +++ GLC G ++A +L+ V N P+
Sbjct: 283 CKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPN 342
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V +Y +I+G+C+ K + A LL M+ +GL P ++ + + G +RA L+
Sbjct: 343 VLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMN 402
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
M + PN +YN I+ GLC KGR+Q+ ++ R+G + D Y+ L+ +C++
Sbjct: 403 VMNEEGFSPNVCTYNAIVDGLC-KKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQ 461
Query: 451 GNVENVMQIAHEMV 464
++ + + ++MV
Sbjct: 462 AEIKQALVLFNKMV 475
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 134/290 (46%), Gaps = 5/290 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC-LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ LI +G + A F + + EN + +Y +++ R + AE ++
Sbjct: 311 TALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRM- 369
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
KE + P+ +TYTT+I G+CK G E A ++ +VM PN+ YN +++G CKKG +
Sbjct: 370 KEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRV 429
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+EA K + G +++TY +I C + +A +L KM +G + ++ ++ ++
Sbjct: 430 QEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTL 489
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ C + ++ + + + P K+Y +I G+C+ G A+ M G
Sbjct: 490 IAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGC 549
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
++ A+ L + +LD A L M + P V+ T+ C
Sbjct: 550 ASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYC 599
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 79/169 (46%), Gaps = 5/169 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I Y GN++ A+ +FH+ + +Y +L+ L + + + A + +++
Sbjct: 522 TSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIE 581
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAK 246
+ + P +V T T+ YCK+ +A V + + K + NT++ C + ++ A
Sbjct: 582 KGLTPCEV-TRVTLAYEYCKIDDGCSAMVVLERLEKKLWVRTVNTLVRKLCSERKVGMAA 640
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
++++++ N +T A + + + D L A++ +K+N
Sbjct: 641 LFFHKLLDKDPNVNRVTIAAFMTACYESNKYDLVSDLSARI----YKEN 685
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 197/431 (45%), Gaps = 62/431 (14%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----KNSN---KLSD 123
AL FFNWA Y HT Y ++ ++L + ++ A + L K S KL
Sbjct: 95 ALQFFNWAQEMG-----YTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEA 149
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + L++ + G + +I F K + ++NSLL +L++ +A++ + +
Sbjct: 150 RFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDE 209
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF----------DVMT------------ 221
++ V PD T+ +IRG+C GM+++ ++F DV+T
Sbjct: 210 MLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAG 269
Query: 222 ------------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+ PN++ Y T+I G+C K E+E+A EM+N+G + N +T
Sbjct: 270 KVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNIT 329
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
YN +I GLC + ++ K ++ +G F + T +++ C G D A+ +
Sbjct: 330 YNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERM 389
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR-------GLKPTVFSFNAVFRI 375
E + PD +Y ++ C+ G ++A LL ++ R G KP V ++N +F+
Sbjct: 390 SELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKY 449
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L E G+ +A +Q+ + + SY T+I G C +G + +L+ M+R
Sbjct: 450 LCETGKTKKAEKAFRQLMRRGT-QDPPSYKTLIMGHC-KEGTFESGYELLVLMLRKDFXP 507
Query: 436 DFTMYSCLLKG 446
DF Y L+ G
Sbjct: 508 DFETYESLING 518
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 111/243 (45%), Gaps = 12/243 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + GN+ A+ F + +++ +Y++L+ L + + AE+ ++++
Sbjct: 369 LMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERK 428
Query: 189 VV------PPDVSTYTTMIRGYCKMGMIENAKKVFDVM----TVKPNLLAYNTMINGFCK 238
++ P V+ Y + + C+ G + A+K F + T P +Y T+I G CK
Sbjct: 429 ILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPP--SYKTLIMGHCK 486
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+G E + + M+ + P+ TY ++I GL + A + KM + + N ST
Sbjct: 487 EGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSST 546
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
S+L L G+ ++ ++ +++ N+ ++ + G +D+A L+ +
Sbjct: 547 FHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLY 606
Query: 359 ARG 361
+G
Sbjct: 607 GKG 609
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 175/341 (51%), Gaps = 33/341 (9%)
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA- 213
G +++YN +LG L +V IK A + F ++++ N+VP V TY T+I GYCK+G IE A
Sbjct: 189 GPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTV-TYNTLIDGYCKVGGIEEAL 247
Query: 214 --KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP------------ 259
K+ V+ NL+ YN+++NG C G +++A++ + EM G P
Sbjct: 248 GFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHS 307
Query: 260 ----------------NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+E TY ++ GLC GR+++A+ ++AK+ NG + ++ ++
Sbjct: 308 NGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILV 367
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
C G +A+ + E + P+ ++ VI+ FC+ G+ D A + ++ M +G+
Sbjct: 368 NAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVS 427
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
PTV ++N++ + G R L +M + PN +SY ++I LC + ++ D E
Sbjct: 428 PTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDR-KLIDAEI 486
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
++ MI G + + +Y+ L++ C +++ + EM+
Sbjct: 487 VLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMI 527
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 179/391 (45%), Gaps = 44/391 (11%)
Query: 115 LKNSNKLSDFFISK-----------LIKAYGDRGNVKAAIFWFHQAKQIENGAC-LYSYN 162
+K++ KL D I + LI Y G ++ A+ + + K+ +N C L +YN
Sbjct: 208 IKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKE-QNVECNLVTYN 266
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKENVVPP---------------------------DVS 195
SLL L + A E ++ +P D
Sbjct: 267 SLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDER 326
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY ++ G C++G IE A++V + V P+ ++YN ++N +C++G++++A +M
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
RG PN +T+N +I C G VD A+ + +M G V T+ S++ G G F
Sbjct: 387 EERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHF 446
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+ +L + +A + P+V SY +IN CK K +A +L +M RG+ P +N +
Sbjct: 447 VRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNML 506
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+L A +M Q V+YNT+I GL GR++ EDL +M G
Sbjct: 507 IEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLG-RNGRVKKAEDLFLQMAGKG 565
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
N D Y+ L+ GY + N + +++ +M
Sbjct: 566 CNPDVITYNSLISGYAKSVNTQKCLELYDKM 596
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 172/362 (47%), Gaps = 10/362 (2%)
Query: 110 IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV 169
+ A L++N S + L+ AY G+VK AI Q ++ ++N+++
Sbjct: 347 VLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFC 406
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNL 226
+ AE + ++V E V P V TY ++I GY + G + D M +KPN+
Sbjct: 407 ETGEVDHAETWVRRMV-EKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNV 465
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
++Y ++IN CK +L +A+ + +M+ RG PN YN +I C ++ +A +
Sbjct: 466 ISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDE 525
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M +G + T+ +++ GL G+ +A + NPDV +Y +I+G+ K
Sbjct: 526 MIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVN 585
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENG--ELDRAILLLKQMPQMDCLPNFVSY 404
+ + + L +M+ G+KPTV +F+ + + G +D+ + ++M QMD +P+ Y
Sbjct: 586 TQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDK---MFQEMLQMDLVPDQFVY 642
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
N +I G + L +M+ G + D Y+ L+ Y + V + + +M
Sbjct: 643 NEMIYSYA-EDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMK 701
Query: 465 TK 466
K
Sbjct: 702 AK 703
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 138/290 (47%), Gaps = 12/290 (4%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-DVMT--VKPNLLAYNTMI 233
A + + + K+ VP S ++R E VF DV+ +P+ +AY +
Sbjct: 106 ATDLYSTMRKDGFVPSTRSV-NRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAV 164
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+L++ + M M+ G P+ YN ++ GLC R+ +A+ L +M
Sbjct: 165 QAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMV 224
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
N T+ +++ G C VG ++A+G+ + E N+ ++ +Y ++NG C G+ D+A +
Sbjct: 225 PNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREV 284
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
L EM G P F + VF NG D + K++ + +Y ++ GLC
Sbjct: 285 LLEMEGSGFLPGGF-LSFVFDDH-SNGAGDDGLFDGKEIR-----IDERTYCILLNGLCR 337
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
GR++ E+++ +++ +G Y+ L+ YC+EG+V+ + +M
Sbjct: 338 V-GRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 2/194 (1%)
Query: 271 LC-INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
LC ++ +DEA L + MR +GF + + +L+ L F++ + +V+++ P
Sbjct: 96 LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
D +Y + + D+ L+K M G+ P+VF++N V L + + A L
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+M Q + +PN V+YNT+I G C G +++ +RM + Y+ LL G C
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGG-IEEALGFKERMKEQNVECNLVTYNSLLNGLCG 274
Query: 450 EGNVENVMQIAHEM 463
G V++ ++ EM
Sbjct: 275 SGRVDDAREVLLEM 288
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 38/271 (14%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+A +K A +F + Q A L +YN+L+ L R +K AE+ F Q+ +
Sbjct: 506 LIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKG 565
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV-------------------------- 222
PDV TY ++I GY K + +++D M +
Sbjct: 566 C-NPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMD 624
Query: 223 -----------KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
P+ YN MI + + G + +A +M+++G +++TYN++I
Sbjct: 625 KMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAY 684
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
+ RV E K L+ M+ G V T+ ++KGLC + F+ A + R ++E + +V
Sbjct: 685 LRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNV 744
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+I+G + G EA + E+ GL
Sbjct: 745 SMCYQLISGLREEGMLREAQIVSSELSIGGL 775
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 109/251 (43%), Gaps = 29/251 (11%)
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L+EA + M G P+ + N ++ L + ++ + A + +G + + +
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ ++ D+ ++++++ M P V +Y +V+ G CK+ + +A L EM R
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P ++N + + G ++ A+ ++M + + N V+YN+++ GLC GR+ D
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLC-GSGRVDDA 281
Query: 422 EDLVDRMIRSGH----------------------------NLDFTMYSCLLKGYCEEGNV 453
+++ M SG +D Y LL G C G +
Sbjct: 282 REVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRI 341
Query: 454 ENVMQIAHEMV 464
E ++ ++V
Sbjct: 342 EKAEEVLAKLV 352
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Query: 341 FCKIGKS-DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
C + K DEA L MR G P+ S N + R LV++ ++ + + + P
Sbjct: 96 LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ V+Y + M K + E L+ M++ G Y+ +L G C+ +++ ++
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFE-LMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKL 214
Query: 460 AHEMVTK 466
EM+ +
Sbjct: 215 FDEMIQR 221
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 163/318 (51%), Gaps = 15/318 (4%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+YS+N L+ + + A F ++ K P V T+ T++ G C + A +F
Sbjct: 15 IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLV-TFNTLLHGLCVEDRVSEALDLF 73
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
M KPN++ + T++NG C++G + EA ++ M+ G +PN++TY ++ G+C G
Sbjct: 74 HQM-CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132
Query: 278 DEAKMLMAKMR-LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
A L+ KM L+ K +V + +++ GL G+ A + + + PD+ +Y
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSC 192
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+INGFC GK EA LL+EM R + P V +F+ + LV+ G+L+ A LL++M
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG 252
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT-----------MYSCLLK 445
PN V+ NT++ GLC G+++D ++ M +S ++D T Y+ L+
Sbjct: 253 VCPNVVTCNTLLDGLC-DSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILIS 311
Query: 446 GYCEEGNVENVMQIAHEM 463
G EG ++ EM
Sbjct: 312 GLINEGKFLEAEELYEEM 329
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 185/399 (46%), Gaps = 29/399 (7%)
Query: 88 YHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
+H T + + L +S A L K + + L+ G V A+
Sbjct: 46 FHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLD 105
Query: 148 -------QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
Q QI G + + + +N ++ EE H + PDV Y+ +
Sbjct: 106 RMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSH-------IKPDVVIYSAI 158
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I G K G +A+ +F M K P+++ Y+ MINGFC G+ EA++ + EM+ R
Sbjct: 159 IDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKI 218
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +T++ +I L G ++ A+ L+ +M +G NV T ++L GLC GK A+
Sbjct: 219 SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE 278
Query: 318 YLRNVMEANMN-----------PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
+ + ++ M+ PDV++Y ++I+G GK EA L +EM RG+ P
Sbjct: 279 MFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 338
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+++++ L + LD A + M PN V++NT+I G C A G + D +L
Sbjct: 339 VTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKA-GMVDDGLELFC 397
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
M R G + Y L++G+ + GN+ + I EM++
Sbjct: 398 EMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMIS 436
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 181/353 (51%), Gaps = 21/353 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIK + + A+ F + ++ L ++N+LL L + + A + FHQ+ K N
Sbjct: 21 LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPN 80
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
VV T+TT++ G C+ G + A + D M ++PN + Y T+++G CK G+ A
Sbjct: 81 VV-----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSA 135
Query: 246 KKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ +M +P+ + Y+A+I GL +GR +A+ L +M+ G ++ T+ M+
Sbjct: 136 LNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMIN 195
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C GK+ +A L+ ++ ++PDV ++ +IN K G + A LL+EM + G+ P
Sbjct: 196 GFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCP 255
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQ--MD---------CLPNFVSYNTIICGLCM 413
V + N + L ++G+L A+ + K M + MD P+ +YN +I GL +
Sbjct: 256 NVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL-I 314
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+G+ + E+L + M G D YS ++ G C++ ++ Q+ M +K
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 124/247 (50%), Gaps = 15/247 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+++ L+ LV+ + A++ +++ V P +V T T++ G C G +++A ++F
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISSGVCP-NVVTCNTLLDGLCDSGKLKDALEMFKA 282
Query: 220 MT--------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
M V+P++ YN +I+G +G+ EA++ EM +RG P+ +TY+
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+MI GLC R+DEA + M F N+ T +++ G C G D + +
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR 402
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ + +Y +I GF K+G + ++ + +EM + G+ P + + L EL RA
Sbjct: 403 GIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 462
Query: 386 ILLLKQM 392
+ +L+++
Sbjct: 463 LAMLEEL 469
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 127/242 (52%), Gaps = 6/242 (2%)
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
++ ++N +I FC +L A ++ G P +T+N +++GLC+ RV EA L
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M K NV T +++ GLC G+ +AV L ++E + P+ +Y +++G CK+
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 345 GKSDEAISLLKEMRARG-LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G + A++LL++M +KP V ++A+ L ++G A L +M P+ V+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ +I G C + G+ + + L+ M+ + D +S L+ +EG++ + + EM
Sbjct: 190 YSCMINGFC-SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248
Query: 464 VT 465
++
Sbjct: 249 IS 250
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 118/236 (50%), Gaps = 14/236 (5%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA- 245
+ PDV T++ +I K G + +A+ + M V PN++ NT+++G C G+L++A
Sbjct: 218 ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDAL 277
Query: 246 ---KKCMNEMMN-------RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
K MM+ G P+ TYN +I GL G+ EA+ L +M G +
Sbjct: 278 EMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 337
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
T+ SM+ GLC + D+A ++ + +P++ ++ +I G+CK G D+ + L
Sbjct: 338 TVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFC 397
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
EM RG+ ++ + R + G ++ ++ + ++M P+ ++ ++ GL
Sbjct: 398 EMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 6/206 (2%)
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
++N +I C ++ A K+ GF + T ++L GLCV + +A+ +
Sbjct: 17 SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ P+V ++ ++NG C+ G+ EA++LL M GL+P ++ + + + G+
Sbjct: 77 CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132
Query: 383 DRAILLLKQMPQMDCL-PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
A+ LL++M ++ + P+ V Y+ II GL GR D ++L M G D YS
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGL-WKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKK 467
C++ G+C G ++ EM+ +K
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRK 217
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 166/333 (49%), Gaps = 5/333 (1%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
R + A+ + ++ G + + NSLL N I A Q+V E PD
Sbjct: 113 RSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV-EMGYQPDTV 171
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
T+TT++ G + A + + M VK P+L+ Y +ING CK+GE + A +N+M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ + Y+ +I LC VD+A L +M G + +V T+ S++ LC G++
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
A L +++E +NP+V ++ +I+ F K GK EA L EM R + P + ++N++
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ LD A + M DCLP+ V+YNT+I G C AK ++ D +L M R G
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK-KVVDGMELFRDMSRRG 410
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ Y+ L+ G+ + + +N + +MV+
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 189/371 (50%), Gaps = 9/371 (2%)
Query: 88 YHHTTPCYTAITDVLLSHSLISIAASLLKN---SNKLSDFFI-SKLIKAYGDRGNVKAAI 143
Y T +T + L H+ S A +L++ D +I RG A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 144 FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
++ ++ + A + Y++++ L + + A F ++ + + PDV TY+++I
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI-RPDVFTYSSLISC 284
Query: 204 YCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
C G +A ++ M + PN++ +N++I+ F K+G+L EA+K +EM+ R PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+TYN++I G C++ R+DEA+ + M +V T+ +++ G C K + R
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
++ + + +Y +I+GF + D A + K+M + G+ P + ++N + L +NG
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+L++A+++ + + + P+ +YN + G+C A G+++D DL + G D Y
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA-GKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 441 SCLLKGYCEEG 451
+ ++ G+C++G
Sbjct: 524 NTMISGFCKKG 534
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 141/252 (55%), Gaps = 4/252 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++NSL+ + + AE+ F ++++ ++ P++ TY ++I G+C ++ A+++F +
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSI-DPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ YNT+INGFCK ++ + + +M RG N +TY +I+G
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+M+ +M +G N+ T+ ++L GLC GK ++A+ + ++ M PD+ +Y +
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ G CK GK ++ L + +G+KP V ++N + + G + A L +M +
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 397 CLPNFVSYNTII 408
LP+ +YNT+I
Sbjct: 551 PLPDSGTYNTLI 562
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 147/280 (52%), Gaps = 4/280 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
V ++ TY MI C+ + A + M P+++ N+++NGFC + EA
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+++M+ G +P+ +T+ +++GL + + EA L+ +M + G + ++ T+ +++ GL
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+ D A+ L + + + DV Y VI+ CK D+A++L EM +G++P V
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
F+++++ L G A LL M + PN V++N++I +G++ + E L D
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA-KEGKLIEAEKLFD 334
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI+ + + Y+ L+ G+C ++ QI MV+K
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 169/329 (51%), Gaps = 13/329 (3%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN--SNKLSDFFIS- 127
AL F N P+ + Y+++ L ++ S A+ LL + K++ ++
Sbjct: 259 ALNLFTEMDNKGIRPDVF-----TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 128 -KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI A+ G + A F + Q + +YNSL+ + + A++ F +V
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELE 243
++ +P DV TY T+I G+CK + + ++F M+ + N + Y T+I+GF + + +
Sbjct: 374 KDCLP-DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A+ +M++ G PN +TYN ++ GLC NG++++A ++ ++ + + ++ T+ M
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+G+C GK + ++ + PDV +Y +I+GFCK G +EA +L +M+ G
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQM 392
P ++N + R + +G+ + L+K+M
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 110/229 (48%), Gaps = 1/229 (0%)
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L+EA EM+ P+ + ++ ++ + + D KM + G N+ T+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
M+ LC + A+ L +M+ P + + ++NGFC + EA++L+ +M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G +P +F + L ++ + A+ L+++M C P+ V+Y +I GLC +G
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC-KRGEPDL 223
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+L+++M + D +YS ++ C+ +V++ + + EM K R
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 196/429 (45%), Gaps = 14/429 (3%)
Query: 45 PLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLS 104
P+ + L + +I +Q N AL F +A +P + H Y +I L
Sbjct: 39 PIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPG---FTHNYDTYHSILFKLSR 95
Query: 105 HSLISIAASL---LKNSN---KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL 158
SL L+NS K + L++ YG G ++++ F + +
Sbjct: 96 ARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSV 155
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
S N+LL VL++ L F + + P++ T +++ CK IE+A KV D
Sbjct: 156 RSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLD 215
Query: 219 ---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + PNL+ Y T++ G+ +G++E AK+ + EM++RG P+ TY ++ G C G
Sbjct: 216 EIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLG 275
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R EA +M M N + N T+ M++ LC K +A ++E + PD
Sbjct: 276 RFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCC 335
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
VI+ C+ K DEA L ++M P + + L + G + A L + +
Sbjct: 336 KVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EK 394
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+P+ ++YNT+I G+C KG + + L D M + Y+ L++G + GNV+
Sbjct: 395 GSIPSLLTYNTLIAGMC-EKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKE 453
Query: 456 VMQIAHEMV 464
+++ EM+
Sbjct: 454 GVRVLEEML 462
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 10/182 (5%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFC 237
+ +++K N +P D + +T+I CK G + A+K+FD P+LL YNT+I G C
Sbjct: 353 LWRKMLKNNCMP-DNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMC 411
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+KGEL EA + ++M R C+PN TYN +I GL NG V E ++ +M G N +
Sbjct: 412 EKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKT 471
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNP--DVKSYEVVINGFCKIGKSDEAISLLK 355
T + +GL +GK + A ++ V A MN D +S+E+ + F G+ D+ + LK
Sbjct: 472 TFLILFEGLQKLGKEEDA---MKIVSMAVMNGKVDKESWELFLKKFA--GELDKGVLPLK 526
Query: 356 EM 357
E+
Sbjct: 527 EL 528
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 215/445 (48%), Gaps = 63/445 (14%)
Query: 115 LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
++NS +D F+ +K I+A N+K + + ++ ++ YN L+G L R
Sbjct: 167 IENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKR 226
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYN 230
I+ AE+ F ++ N+V + TY T+I GYCK+G ++ A K+ + M +V PN++ +N
Sbjct: 227 IRDAEKMFDEMCNINLV-GSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFN 285
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL--CINGRVDEAKMLMAKMR 288
++++G CK +++EA+ + EM G P+ TY+ + GL C +G + A L +
Sbjct: 286 SLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG--NGAMELYEQAT 343
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G + N T +L GLC GK ++A L+ E + D Y +NG+C+IG +
Sbjct: 344 EKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMN 403
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA----------------------- 385
+AI ++ M + GL+P +FN++ + E+D+A
Sbjct: 404 KAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLI 463
Query: 386 ------------ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+L+QM ++ PN VSY ++I LC G++ + E ++ MI G
Sbjct: 464 DGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLC-KDGKILEAEIVLRDMICRGV 522
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM------------------VTKKGRLLKLKN 475
+ +Y+ L+ G C G V++ ++ EM + KKG+L + ++
Sbjct: 523 LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAED 582
Query: 476 FLTRVVDALLLMWIVTGGSWISRFV 500
FLT++ + ++T S IS +
Sbjct: 583 FLTQITSSGHSPDVITYNSLISGYA 607
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 173/343 (50%), Gaps = 8/343 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+ Y G++ AI + + ++NSL+ + + AEE+ ++ E
Sbjct: 392 FVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA-EK 450
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V P V TY T+I GY K+ + ++ + M VKPN+++Y ++IN CK G++ EA
Sbjct: 451 GVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEA 510
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + +M+ RG PN YN +I G C+ G+V +A +M + + T+ ++ G
Sbjct: 511 EIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDG 570
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC GK +A +L + + +PDV +Y +I+G+ G + + L + M+ G+KPT
Sbjct: 571 LCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPT 630
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-GRMQDVEDL 424
V +++ + + G ++ L +M QM+ LP+ V YN +I C A+ G Q L
Sbjct: 631 VRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMI--HCYAEIGNTQKAYSL 687
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
M+ G + D Y+ L+ G+ EG + N+ + + M K+
Sbjct: 688 HQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKE 730
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 168/335 (50%), Gaps = 12/335 (3%)
Query: 135 DRGNVKAAIFWFHQAKQIENGACLYSYNS--LLGVLVRVNSIKLAEEFFHQIVKENVVPP 192
D GN A+ + QA E G + +Y LL L + ++ AEE + + +V
Sbjct: 330 DDGN--GAMELYEQA--TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVAD 385
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
+V Y T + GYC++G + A + M ++PN + +N++I+ FC E+++A++ +
Sbjct: 386 EV-IYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWV 444
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M +G P+ TYN +I G D ++ +M G K NV ++ S++ LC
Sbjct: 445 KKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKD 504
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
GK +A LR+++ + P+ + Y ++I+G C +GK +A+ EM + PT+ ++
Sbjct: 505 GKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTY 564
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + L + G+L A L Q+ P+ ++YN++I G A G + L + M
Sbjct: 565 NVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANA-GNVSKCLGLYETMK 623
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
G Y L+ G +EG +E V ++ +EM+
Sbjct: 624 NLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEML 657
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 159/347 (45%), Gaps = 18/347 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI YG Q ++I + SY SL+ L + I AE ++
Sbjct: 462 LIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRG 521
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
V+P + Y +I G C +G +++A + FD M + P L+ YN +I+G CKKG+L EA
Sbjct: 522 VLP-NAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEA 580
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + ++ + G P+ +TYN++I G G V + L M+ G K V T+ ++ G
Sbjct: 581 EDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG 640
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C + +++ N+ PD Y +I+ + +IG + +A SL + M +G+ P
Sbjct: 641 -CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPD 699
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++N++ G+L L+ M + P +Y+ ++ G C D++D
Sbjct: 700 KMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHC-------DLKDFS 752
Query: 426 D------RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M+ + + ++ + L G +EG ++ V I EM K
Sbjct: 753 GAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVK 799
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 40/264 (15%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G VK A+ +F + + E L +YN L+ L + + AE+F QI PDV T
Sbjct: 540 GKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGH-SPDVIT 598
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y ++I GY G + +++ M +KP + Y+ +I+G C K +E +K NEM+
Sbjct: 599 YNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEML 657
Query: 254 -----------------------------------NRGCRPNELTYNAMIYGLCINGRVD 278
++G P+++TYN++I G G++
Sbjct: 658 QMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLS 717
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
K L+ M+ T+ ++KG C + F A + R ++E N P+ +
Sbjct: 718 NIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELT 777
Query: 339 NGFCKIGKSDEAISLLKEMRARGL 362
G + G+ E + EM +G+
Sbjct: 778 AGLEQEGRLQEVQVICSEMNVKGI 801
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 101/201 (50%), Gaps = 8/201 (3%)
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L ++ +GF+ + + ++ + + +L ++ + + P+V Y V+I G C
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ + +A + EM L ++ ++N + + GELD A + ++M + PN +
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY--CEEGNVENVMQIA 460
++N+++ GLC + +M++ L+ M +G D YS L G C++GN M++
Sbjct: 283 TFNSLLSGLCKMR-KMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGN--GAMEL- 338
Query: 461 HEMVTKKGRLLKLKNFLTRVV 481
+E T+KG +++ N+ ++
Sbjct: 339 YEQATEKG--IRINNYTGSIL 357
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 141/275 (51%), Gaps = 4/275 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PDV TYTT+I G CK+G A +F M +P+++ Y+T+I+ CK + EA
Sbjct: 8 PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 67
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M +G PN TYN++I GLC R EA ++ +M N+ T ++ C
Sbjct: 68 FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK 127
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G +A G L+ + E + P+V +Y ++NG+ + EA L M +G KP VFS
Sbjct: 128 EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFS 187
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + + + A L +M P+ VSYNT+I GLC GR+++ DL M
Sbjct: 188 YNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL-GRLREAHDLFKNM 246
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ +G+ D YS LL G+C++G + ++ M
Sbjct: 247 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM 281
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 130/243 (53%), Gaps = 1/243 (0%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P++ Y T+ING CK GE A +M GC+P+ +TY+ +I LC + RV+EA
Sbjct: 7 QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
+ + M+ G N+ T+ S+++GLC ++ +A L +M N+ P++ ++ ++IN FC
Sbjct: 67 IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K G EA +LK M G++P V +++++ E+ A L M C P+
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF 186
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
SYN +I G C AK R+ + + L + MI G D Y+ L+ G C+ G + +
Sbjct: 187 SYNILINGYCKAK-RIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 245
Query: 463 MVT 465
M+T
Sbjct: 246 MLT 248
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 149/268 (55%), Gaps = 6/268 (2%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
R N IF + +AK I +++YNSL+ L + + A ++++ N++P ++
Sbjct: 60 RVNEALDIFSYMKAKGISPN--IFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP-NIV 116
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
T++ +I +CK G + A+ V MT V+PN++ Y++++NG+ + E+ EA+K + M
Sbjct: 117 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ +GC+P+ +YN +I G C R+ EAK L +M G ++ ++ +++ GLC +G+
Sbjct: 177 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+A +N++ PD+ +Y ++++GFCK G +A L + M++ LKP + +N +
Sbjct: 237 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 296
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPN 400
+ ++ L A L ++ PN
Sbjct: 297 IDAMCKSRNLKEARKLFSELFVQGLQPN 324
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M G++ +V T+ +++ GLC +G+ A G + + EA PDV +Y +I+ CK +
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
+EA+ + M+A+G+ P +F++N++ + L A +L +M ++ +PN V+++
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+I C +G + + ++ M G + YS L+ GY + V ++ M+TK
Sbjct: 121 LINIFC-KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 150/280 (53%), Gaps = 4/280 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
V P+ TY +I C+ G + +A V D M + P+++ YN ++ CK +A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ ++ M GC PN +TYN ++ G+C G VD+A L+ + +G K + + ++LKGL
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C ++ A + ++ N P+ ++ VVI C+ G +AI LL++M G +
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++NA+ L E +D A+ LL +M C P+ V+YNT++ GLC A R D E+L+D
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSA-ARWVDAEELMD 241
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M ++G D ++ L+ C++G + + +++ +M K
Sbjct: 242 NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDK 281
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 162/343 (47%), Gaps = 6/343 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + LI +RG V+ A+ + +YN LL + + A E
Sbjct: 8 YTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDL 67
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ E P +V TY ++ G C G +++A ++ + KP+ + YNT++ G C
Sbjct: 68 MRAEGCTPNNV-TYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAE 126
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+A + + EM+ C PNE T+N +IY LC G + +A L+ KM +G N+ T+
Sbjct: 127 RWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYN 186
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ GLC D A+G L + PD+ +Y ++ G C + +A L+ M
Sbjct: 187 AIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQN 246
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G P +FN + L + G + AI + KQMP C PN ++Y+TII GL A Q
Sbjct: 247 GCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQA 306
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+E L + M G N D +Y L + ++ +E +Q ++
Sbjct: 307 LE-LFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKL 347
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 149/307 (48%), Gaps = 41/307 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L L A+E ++++EN PP+ +T+ +I C+ G+++ A ++ +
Sbjct: 114 NYNTVLKGLCSAERWGDADELVTEMLRENC-PPNEATFNVVIYSLCRKGLLQQAIQLLEK 172
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ N++ YN +ING C++ ++ A +++M + GC+P+ +TYN ++ GLC R
Sbjct: 173 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAR 232
Query: 277 VDEAKMLMAKMRLNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+A+ LM M NG DNV T +++ LC G A+ + + + P+ +Y
Sbjct: 233 WVDAEELMDNMTQNGCLPDNV-TFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYS 291
Query: 336 VVINGFCKIGKSDEAISLLKEM----------------------------------RARG 361
+I+G K K D+A+ L EM + G
Sbjct: 292 TIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSG 351
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P +NA+ L NG+ + AI ++ M C+P+ ++Y +I GL +G + +
Sbjct: 352 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAY-EGYLNEA 410
Query: 422 EDLVDRM 428
+L+ ++
Sbjct: 411 RELLIKL 417
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 135/268 (50%), Gaps = 5/268 (1%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
+G ++ AI + + A + +YN+++ L ++ A ++ K PD+
Sbjct: 160 KGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM-KSYGCKPDIV 218
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY T+++G C +A+++ D MT P+ + +NT+I C+KG + +A + +M
Sbjct: 219 TYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQM 278
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
++GC PN +TY+ +I GL ++D+A L +M GF + ++ + + L
Sbjct: 279 PDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTI 337
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
++A+ +R + ++ ++P Y ++ G C+ GK++ AI ++ M + G P ++ +
Sbjct: 338 EEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVIL 397
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPN 400
L G L+ A LL ++ D L N
Sbjct: 398 IEGLAYEGYLNEARELLIKLCSRDVLVN 425
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 163/318 (51%), Gaps = 15/318 (4%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+YS+N L+ + + A F ++ K P V T+ T++ G C + A +F
Sbjct: 15 IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLV-TFNTLLHGLCVEDRVSEALDLF 73
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
M KPN++ + T++NG C++G + EA ++ M+ G +PN++TY ++ G+C G
Sbjct: 74 HQM-CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132
Query: 278 DEAKMLMAKMR-LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
A L+ KM L+ K +V + +++ GL G+ A + + + PD+ +Y
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSC 192
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+INGFC GK EA LL+EM R + P V +F+ + LV+ G+L+ A LL++M
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG 252
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT-----------MYSCLLK 445
PN V+ NT++ GLC G+++D ++ M +S ++D T Y+ L+
Sbjct: 253 VCPNVVTCNTLLDGLC-DSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILIS 311
Query: 446 GYCEEGNVENVMQIAHEM 463
G EG ++ EM
Sbjct: 312 GLINEGKFLEAEELYEEM 329
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 185/399 (46%), Gaps = 29/399 (7%)
Query: 88 YHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
+H T + + L +S A L K + + L+ G V A+
Sbjct: 46 FHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLD 105
Query: 148 -------QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
Q QI G + + + +N ++ EE H + PDV Y+ +
Sbjct: 106 RMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSH-------IKPDVVIYSAI 158
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I G K G +A+ +F M K P+++ Y+ MINGFC G+ EA++ + EM+ R
Sbjct: 159 IDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKI 218
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +T++ +I L G ++ A+ L+ +M +G NV T ++L GLC GK A+
Sbjct: 219 SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE 278
Query: 318 YLRNVMEANMN-----------PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
+ + ++ M+ PDV++Y ++I+G GK EA L +EM RG+ P
Sbjct: 279 MFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 338
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+++++ L + LD A + M PN V++NT+I G C A G + D +L
Sbjct: 339 VTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKA-GMVDDGLELFC 397
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
M R G + Y L++G+ + GN+ + I EM++
Sbjct: 398 EMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMIS 436
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 181/353 (51%), Gaps = 21/353 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIK + + A+ F + ++ L ++N+LL L + + A + FHQ+ K N
Sbjct: 21 LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPN 80
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
VV T+TT++ G C+ G + A + D M ++PN + Y T+++G CK G+ A
Sbjct: 81 VV-----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSA 135
Query: 246 KKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ +M +P+ + Y+A+I GL +GR +A+ L +M+ G ++ T+ M+
Sbjct: 136 LNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMIN 195
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C GK+ +A L+ ++ ++PDV ++ +IN K G + A LL+EM + G+ P
Sbjct: 196 GFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCP 255
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQ--MD---------CLPNFVSYNTIICGLCM 413
V + N + L ++G+L A+ + K M + MD P+ +YN +I GL +
Sbjct: 256 NVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL-I 314
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+G+ + E+L + M G D YS ++ G C++ ++ Q+ M +K
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 124/247 (50%), Gaps = 15/247 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+++ L+ LV+ + A++ +++ V P +V T T++ G C G +++A ++F
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISSGVCP-NVVTCNTLLDGLCDSGKLKDALEMFKA 282
Query: 220 MT--------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
M V+P++ YN +I+G +G+ EA++ EM +RG P+ +TY+
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+MI GLC R+DEA + M F N+ T +++ G C G D + +
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR 402
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ + +Y +I GF K+G + ++ + +EM + G+ P + + L EL +A
Sbjct: 403 GIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKA 462
Query: 386 ILLLKQM 392
+ +L+++
Sbjct: 463 LAMLEEL 469
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 127/242 (52%), Gaps = 6/242 (2%)
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
++ ++N +I FC +L A ++ G P +T+N +++GLC+ RV EA L
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M K NV T +++ GLC G+ +AV L ++E + P+ +Y +++G CK+
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 345 GKSDEAISLLKEMRARG-LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G + A++LL++M +KP V ++A+ L ++G A L +M P+ V+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ +I G C + G+ + + L+ M+ + D +S L+ +EG++ + + EM
Sbjct: 190 YSCMINGFC-SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248
Query: 464 VT 465
++
Sbjct: 249 IS 250
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 118/236 (50%), Gaps = 14/236 (5%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA- 245
+ PDV T++ +I K G + +A+ + M V PN++ NT+++G C G+L++A
Sbjct: 218 ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDAL 277
Query: 246 ---KKCMNEMMN-------RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
K MM+ G P+ TYN +I GL G+ EA+ L +M G +
Sbjct: 278 EMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 337
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
T+ SM+ GLC + D+A ++ + +P++ ++ +I G+CK G D+ + L
Sbjct: 338 TVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFC 397
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
EM RG+ ++ + R + G ++ ++ + ++M P+ ++ ++ GL
Sbjct: 398 EMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 6/206 (2%)
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
++N +I C ++ A K+ GF + T ++L GLCV + +A+ +
Sbjct: 17 SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ P+V ++ ++NG C+ G+ EA++LL M GL+P ++ + + + G+
Sbjct: 77 CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132
Query: 383 DRAILLLKQMPQMDCL-PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
A+ LL++M ++ + P+ V Y+ II GL GR D ++L M G D YS
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGL-WKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKK 467
C++ G+C G ++ EM+ +K
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRK 217
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 155/299 (51%), Gaps = 5/299 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +Y SL+ R ++ ++V +N+ P+V T+ +I +C+ G + A+ +F
Sbjct: 259 ILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNI-NPNVYTFNVLIDAFCRKGKMIEAQGMF 317
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
++M + P+++ +NT+I+G C G + EA+K + + RG P+ +Y +I G C
Sbjct: 318 NLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKC 377
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+DEA L +MR ++ + S++ GLC G+ A + P+V +Y
Sbjct: 378 KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITY 437
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I+ FCKI D I L K M +GL PTV ++N + ++ + A+ LL M
Sbjct: 438 NILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQS 497
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ P+ ++YN++ GLC + GR+ D +L M G +D Y+ LL +C+ +V
Sbjct: 498 KNLAPDSITYNSLFDGLCKS-GRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 193/387 (49%), Gaps = 30/387 (7%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAI-FWFHQAKQ- 151
CY + ++ + S++ I +LK + ++ ++ ++K G V+ A+ F + A Q
Sbjct: 128 CYCHLGEMGFAFSVLGI---VLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184
Query: 152 -IENGACLYSYNSLLGVLVRV----NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ + C Y +L+ L ++ ++ +L +E Q+VK N+V Y +I +CK
Sbjct: 185 MLLDEVC---YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIV-----IYNMIIDSFCK 236
Query: 207 MGMIENAK----KVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
+ A+ K+ D M + P++L Y ++I GFC+ G+ E K+ M EM+N+ PN
Sbjct: 237 DELTCKARDLYLKIVD-MGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVY 295
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
T+N +I C G++ EA+ + M G + ++ T +++ G C+ G +A V
Sbjct: 296 TFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTV 355
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
E + PDV SY ++I G+CK + DEA+SL EMR + + + ++++ L ++G +
Sbjct: 356 FERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRI 415
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE---DLVDRMIRSGHNLDFTM 439
A L + PN ++YN +I C ++QD++ +L M G
Sbjct: 416 SYAWELFSTINNDGPPPNVITYNILIDAFC----KIQDIDMGIELFKLMCGKGLTPTVLT 471
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+ GYC+ + M + M +K
Sbjct: 472 YNILINGYCKSKRIREAMNLLSVMQSK 498
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 139/291 (47%), Gaps = 7/291 (2%)
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVP-PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK-- 223
+L N I A F+ ++ N+ P P V + T+I KM A + M K
Sbjct: 58 ILSSFNGIDDAVTLFNHLI--NMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGV 115
Query: 224 -PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P++ + IN +C GE+ A + ++ RG +PN +T ++ GLCING V +A
Sbjct: 116 TPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMD 175
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
+ G + + +++ GLC +G+ A L+ + + P++ Y ++I+ FC
Sbjct: 176 FHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFC 235
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K + +A L ++ G+ P + ++ ++ R G+ L+ +M + PN
Sbjct: 236 KDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVY 295
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
++N +I C KG+M + + + + M++ G D ++ L+ G+C GNV
Sbjct: 296 TFNVLIDAFC-RKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNV 345
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ +NT+I K A + +M+ +G P+ T + I C G + A +
Sbjct: 82 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ + G++ N T +++KGLC+ G+ +A+ + NV M D Y +ING CK
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
IG+S +A LL+EM + +KP + +N + ++ +A L ++ M P+ ++
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 261
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y ++I G C G+ +V+ L+ M+ N + ++ L+ +C +G + + + M
Sbjct: 262 YTSLIRGFCRT-GQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLM 320
Query: 464 VTKKGRLLKLKNFLTRV 480
V K+G+ + F T +
Sbjct: 321 V-KRGQQPDIVTFNTLI 336
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 4/160 (2%)
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D AV +++ P V + +I K+ AISLLK+M +G+ P++F+ +
Sbjct: 66 DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW 125
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
GE+ A +L + + PN ++ T++ GLC+ G +Q D D + G
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCI-NGEVQKAMDFHDNVAAQG 184
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLK 472
LD Y L+ G C+ G + Q+ EM +G+++K
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEM---EGQVVK 221
>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
Length = 642
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 13/311 (4%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN L+ +R + + L E + ++ PDV T ++R C G +E A++VF+ M
Sbjct: 113 YNRLILTALRESRLDLVEALYKDLLLAGA-QPDVFTRNLLLRALCDAGRMELAQRVFEAM 171
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
V+ N ++ + G+C+ G +A K ++ M + N + N ++ G C G V+EA
Sbjct: 172 PVR-NEFSFGILARGYCRAGRSVDALKVLDGMPSM----NLVVCNTVVAGFCKEGLVEEA 226
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN----PDVKSYEV 336
+ L+ +MR+ G NV T S + LC G+ A +++ E + PD +++V
Sbjct: 227 ERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDV 286
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++GFC G DEA L+ MR G V S+N LV NG + A LL++M
Sbjct: 287 MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHER 346
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG-HNLDFTMYSCLLKGYCEEGNVEN 455
PN +YN I+ GLC +G+ D V+ IRSG + D Y+ LL YC +GN+
Sbjct: 347 IHPNSYTYNIIVSGLC-KEGKAFDARR-VENFIRSGVMSPDVVTYTSLLHAYCSKGNIAA 404
Query: 456 VMQIAHEMVTK 466
+I EM K
Sbjct: 405 ANRILDEMAQK 415
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 172/369 (46%), Gaps = 52/369 (14%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++ N LL L ++LA+ F + N ++ + RGYC+ G +A KV
Sbjct: 145 VFTRNLLLRALCDAGRMELAQRVFEAMPVRNEF-----SFGILARGYCRAGRSVDALKVL 199
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR- 276
D M NL+ NT++ GFCK+G +EEA++ + M +G PN +T+N+ I LC GR
Sbjct: 200 DGMPSM-NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRV 258
Query: 277 --------------------------------------VDEAKMLMAKMRLNGFKDNVST 298
VDEA++L+ MR GF V +
Sbjct: 259 LDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVES 318
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ L GL G+ +A LR + ++P+ +Y ++++G CK GK+ +A + +R
Sbjct: 319 YNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIR 378
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+ + P V ++ ++ G + A +L +M Q C PN +YN ++ L A GR
Sbjct: 379 SGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRA-GRT 437
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA----HEMVTKKGRLLKLK 474
+ E L++RM G++LD + ++ G C ++ M I E T GRL
Sbjct: 438 TEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRL--GN 495
Query: 475 NFLTRVVDA 483
+FL+ V D+
Sbjct: 496 SFLSVVSDS 504
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 157/318 (49%), Gaps = 28/318 (8%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN L LVR + A E ++ E + P+ TY ++ G CK G +A++V +
Sbjct: 318 SYNRWLSGLVRNGRVGEAHELLREMAHERI-HPNSYTYNIIVSGLCKEGKAFDARRVENF 376
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ + P+++ Y ++++ +C KG + A + ++EM +GC PN TYN ++ L GR
Sbjct: 377 IRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGR 436
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG------------------- 317
EA+ L+ +M G+ + + ++ GLC K D A+G
Sbjct: 437 TTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNS 496
Query: 318 YLRNVMEANMN----PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+L V +++++ PD +Y ++I+ CK G+ DEA L EM + + P ++
Sbjct: 497 FLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFI 556
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
++G+ AI +L+ M + C P+ +YN +I G K + ++ L+ M G
Sbjct: 557 HGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGF-EEKHKSDEIMKLMSEMEEKGV 615
Query: 434 NLDFTMYSCLLKGYCEEG 451
+ + Y+ L+K +C++G
Sbjct: 616 SPNVLTYNSLIKSFCQQG 633
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 150/338 (44%), Gaps = 31/338 (9%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKE---NVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
++NS + L + + A F + ++ + PD T+ M+ G+C G ++ A+ +
Sbjct: 244 TFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVL 303
Query: 217 FDVMTVKPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
D+M L +YN ++G + G + EA + + EM + PN TYN ++ GLC
Sbjct: 304 VDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCK 363
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G+ +A+ + +R +V T+ S+L C G A L + + P+ +
Sbjct: 364 EGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFT 423
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y V++ + G++ EA LL+ M +G N + L N +LD A+ ++ M
Sbjct: 424 YNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMW 483
Query: 394 Q-----------------------MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ CLP+ ++Y+ +I LC +GR + + + MI
Sbjct: 484 EEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALC-KEGRFDEAKKKLLEMIV 542
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ D +Y + GYC+ G +++ +M KKG
Sbjct: 543 KDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDM-EKKG 579
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 145/335 (43%), Gaps = 32/335 (9%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N+++ + ++ AE ++ + + P +V T+ + I CK G + +A ++F M
Sbjct: 211 NTVVAGFCKEGLVEEAERLVERMRVQGLAP-NVVTFNSRISALCKAGRVLDAYRIFKDMQ 269
Query: 222 -------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+P+ + ++ M++GFC G ++EA+ ++ M G +YN + GL N
Sbjct: 270 EDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRN 329
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GRV EA L+ +M N T+ ++ GLC GK A + M+PDV +Y
Sbjct: 330 GRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTY 389
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+++ +C G A +L EM +G P F++N + + L G A LL++M +
Sbjct: 390 TSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSE 449
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL------------------- 435
+ N II GLC ++ +VD M G
Sbjct: 450 KGYSLDTAGCNIIIDGLCR-NSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQ 508
Query: 436 ----DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D YS L+ C+EG + + EM+ K
Sbjct: 509 RCLPDRITYSILISALCKEGRFDEAKKKLLEMIVK 543
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 62/291 (21%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN ++ L + A ++ V+ PDV TYT+++ YC G I A ++ D
Sbjct: 352 YTYNIIVSGLCKEGKAFDARRV-ENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILD 410
Query: 219 VMTVK---PNLLAYNTM-----------------------------------INGFCKKG 240
M K PN YN + I+G C+
Sbjct: 411 EMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNS 470
Query: 241 ELEEAKKCMNEMMNRG-----------------------CRPNELTYNAMIYGLCINGRV 277
+L+ A ++ M G C P+ +TY+ +I LC GR
Sbjct: 471 KLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRF 530
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DEAK + +M + + + + + G C GK A+ LR++ + NP ++Y ++
Sbjct: 531 DEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLL 590
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
I GF + KSDE + L+ EM +G+ P V ++N++ + + G L R L
Sbjct: 591 IRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGMLTRPCLF 641
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 15/249 (6%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P YN +I ++ L+ + +++ G +P+ T N ++ LC GR++ A+ +
Sbjct: 108 PPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRV 167
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M + N + + +G C G+ A+ L + N+ V+ GFCK
Sbjct: 168 FEAMPVR----NEFSFGILARGYCRAGRSVDALKVLDGMPSMNL----VVCNTVVAGFCK 219
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC-----L 398
G +EA L++ MR +GL P V +FN+ L + G + A + K M Q D
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDM-QEDWQHGLPR 278
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P+ V+++ ++ G C A G + + LVD M G Y+ L G G V +
Sbjct: 279 PDQVTFDVMLSGFCDA-GFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHE 337
Query: 459 IAHEMVTKK 467
+ EM ++
Sbjct: 338 LLREMAHER 346
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 166/338 (49%), Gaps = 5/338 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+ Y G + A+ F + +Y+ N +L +V+ +L F ++ +
Sbjct: 920 LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG 979
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+ P +V T+ +I G C G ++ A + M P ++ YNT++N +CKKG + A
Sbjct: 980 ICP-NVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 1038
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ M+ +G + TYN I LC N R +A +L+ KMR N T+ +++ G
Sbjct: 1039 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 1098
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
GK A + + +++P+ +Y +I G C +G +EA+ LL M A GL+
Sbjct: 1099 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 1158
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++ + L ++ + + A LL++M D + ++Y +I GLC G + + LV
Sbjct: 1159 EVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLC-KNGMLDEAVQLV 1217
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M + G N D YS L+ G+C GN+++ +I M
Sbjct: 1218 GNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRM 1255
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 147/297 (49%), Gaps = 5/297 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ V+ I +A + F+++ K ++ P+ TY +I G+C +G E A ++ D
Sbjct: 1091 TYNTLINGFVKEGKIGVAAQVFNEMSKFDL-SPNCVTYNALIGGHCHVGDFEEALRLLDH 1149
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ N + Y T++NG CK + E AK+ + M + Y +I GLC NG
Sbjct: 1150 MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGM 1209
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEA L+ M +G +V T+ S++ G C VG A + + + + + Y
Sbjct: 1210 LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYST 1269
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I FC+ G EA+ + M G F+ N + L +G+L A L M ++
Sbjct: 1270 LIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIG 1329
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+PN ++Y+ II G + G + D MI+ G + F Y LLKG C+ GN+
Sbjct: 1330 LVPNSITYDCIINGY-GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 1385
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 153/295 (51%), Gaps = 5/295 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +LL L + +LA+ ++ ++V ++ YT +I G CK GM++ A ++
Sbjct: 1161 TYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA-YTVLIDGLCKNGMLDEAVQLVGN 1219
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+++ Y+++INGFC+ G ++ AK+ + M G N++ Y+ +IY C +G
Sbjct: 1220 MYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGN 1279
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V EA + A M NG + T ++ LC GK +A +L ++ + P+ +Y+
Sbjct: 1280 VTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDC 1339
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING+ IG A S +M G P+ F++ ++ + L + G L A L ++ +
Sbjct: 1340 IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIP 1399
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ V YNT++ C + G + + L D+M+++ D YS LL G C +G
Sbjct: 1400 GAVDSVMYNTLLAETCKS-GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG 1453
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 174/411 (42%), Gaps = 79/411 (19%)
Query: 129 LIKAYGDRGNVKAAI--FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L+ Y +G KAAI + K IE C +YN + L + A ++ K
Sbjct: 1025 LLNWYCKKGRYKAAIELIDYMICKGIEADVC--TYNVFIDNLCTNHRSAKAYLLLKKMRK 1082
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
E + P +V TY T+I G+ K G I A +VF+ M+ + PN + YN +I G C G+ E
Sbjct: 1083 EMISPNEV-TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 1141
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + ++ M G R NE+TY ++ GLC + + + AK L+ +MR+N + ++
Sbjct: 1142 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 1201
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING----------------------- 340
GLC G D+AV + N+ + +NPDV +Y +ING
Sbjct: 1202 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 1261
Query: 341 ------------FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
FC+ G EA+ + M G F+ N + L +G+L A
Sbjct: 1262 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 1321
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
L M ++ +PN ++Y+ II G + G + D MI+ G + F Y LLKG C
Sbjct: 1322 LCHMSRIGLVPNSITYDCIINGY-GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 1380
Query: 449 -----------------------------------EEGNVENVMQIAHEMV 464
+ GN+ + + +MV
Sbjct: 1381 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV 1431
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 139/279 (49%), Gaps = 7/279 (2%)
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEE 244
N +P S + +IR Y K GMI+ A + F+++ + KP++ N ++ K E
Sbjct: 911 NSIP---SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTEL 967
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
EM ++G PN T+N +I GLC+ G + +A L+ +M NGF + T+ ++L
Sbjct: 968 VWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLN 1027
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
C G++ A+ + ++ + DV +Y V I+ C +S +A LLK+MR + P
Sbjct: 1028 WYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISP 1087
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++N + V+ G++ A + +M + D PN V+YN +I G C G ++ L
Sbjct: 1088 NEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHV-GDFEEALRL 1146
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+D M +G L+ Y LL G C+ E ++ M
Sbjct: 1147 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERM 1185
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 153/336 (45%), Gaps = 44/336 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI GN+K A Q + ENG + +YN+LL + K A E ++
Sbjct: 990 LINGLCVEGNLKKAGNLLKQME--ENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMIC 1047
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ + DV TY I C A + M + PN + YNT+INGF K+G++
Sbjct: 1048 KGI-EADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 1106
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + NEM PN +TYNA+I G C G +EA L+ M G + N T+ ++L
Sbjct: 1107 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 1166
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GLC KF+ A L + +M +Y V+I+G CK G DEA+ L+ M G+
Sbjct: 1167 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 1226
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++Y+++I G C G ++ ++
Sbjct: 1227 PDV-----------------------------------ITYSSLINGFCRV-GNIKSAKE 1250
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
++ RM RSG L+ +YS L+ +C+ GNV M++
Sbjct: 1251 IICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 1286
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 169/385 (43%), Gaps = 9/385 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
PN Y Y +I D L + S ++K S F L+K GN+ A
Sbjct: 1332 PNSITYDCIINGYGSIGDPLNAFSFFD---DMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 1388
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ ++ I YN+LL + ++ A F ++V+ NV+P D TY++++
Sbjct: 1389 KKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP-DSYTYSSLLT 1447
Query: 203 GYCKMGMIENAKKVFDVM----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
G C+ G A +F T+ PN + Y +++G K G + A EMM +G
Sbjct: 1448 GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC 1507
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P+ + +NA+I G++ +A + MR G N++T+ +L G + +
Sbjct: 1508 PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 1567
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+M + PD ++ +I G K G D + LL +M G F+FN + E
Sbjct: 1568 YSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSE 1627
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
+G++ +A L+ M + P+ +YN I GL K ++ ++ M+ +G
Sbjct: 1628 SGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL-NKKSAFRESTVVLHEMLENGVIPKHA 1686
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEM 463
Y L+ G C G+++ ++ EM
Sbjct: 1687 QYITLINGMCRVGDIQGAFKLKDEM 1711
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 156/383 (40%), Gaps = 39/383 (10%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
L+ S LI + GNV A+ + +GA ++ N L+ L R + AE+F
Sbjct: 1262 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 1321
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+ + +VP + TY +I GY +G NA FD M P+ Y +++ G C
Sbjct: 1322 LCHMSRIGLVPNSI-TYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 1380
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G L EAKK +N + + + YN ++ C +G + EA L KM N +
Sbjct: 1381 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 1440
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVM-EANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ S+L GLC GK AV M + P+ Y +++G K G A +E
Sbjct: 1441 TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 1500
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG------ 410
M +G P +FNA+ G++ +A M PN +YN ++ G
Sbjct: 1501 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQA 1560
Query: 411 ---------------------------LCMAKGRMQDVE-DLVDRMIRSGHNLDFTMYSC 442
L ++K + D+ L+ +MI G D ++
Sbjct: 1561 LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNI 1620
Query: 443 LLKGYCEEGNVENVMQIAHEMVT 465
L+ Y E G + + + M T
Sbjct: 1621 LINKYSESGKMRKAFDLVNFMNT 1643
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 164/400 (41%), Gaps = 45/400 (11%)
Query: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS---Y 161
H +++ +++N+ + S L+ +G A+ F A + G + Y
Sbjct: 1421 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTA--MGRGTLFPNHVMY 1478
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
L+ L + K A FF +++K+ P D + +I + G + A F M
Sbjct: 1479 TCLVDGLSKAGHPKAAFYFFEEMMKKGTCP-DTVAFNAIIDSCSRRGQMMKANDFFSTMR 1537
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
V PNL YN +++GF KK L + MM G P++LT++++I GL +G D
Sbjct: 1538 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 1597
Query: 279 EAKMLMAKMRLNG-----FKDNV------------------------------STHKSML 303
L+ KM + G F N+ T+ +
Sbjct: 1598 LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 1657
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GL F ++ L ++E + P Y +ING C++G A L EM A G
Sbjct: 1658 NGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 1717
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+ +A+ R L+ G+ + A+L+L M +M LP ++ T++ C ++ +
Sbjct: 1718 SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFC-RDAKIAEALK 1776
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L M G LD Y+ L+ G C G+ ++ EM
Sbjct: 1777 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEM 1816
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 4/274 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+++SL+ L + L + +++ E + D T+ +I Y + G + A + +
Sbjct: 1582 TFHSLILGLSKSGIPDLGVKLLGKMIMEGTLA-DQFTFNILINKYSESGKMRKAFDLVNF 1640
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+ YN + NG KK E+ ++EM+ G P Y +I G+C G
Sbjct: 1641 MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 1700
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ A L +M GF + +M++GL GK + A+ L +++ + P + ++
Sbjct: 1701 IQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTT 1760
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++ FC+ K EA+ L M GLK V ++N + + NG+ A L ++M D
Sbjct: 1761 LMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1820
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
PN +Y ++ + A +Q + L D R
Sbjct: 1821 LCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 1854
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 15/365 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I YG G+ A +F + ++Y SLL L + ++ A++F +++ +
Sbjct: 1340 IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL---H 1396
Query: 189 VVPPDVST--YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+P V + Y T++ CK G + A +FD M V P+ Y++++ G C+KG+
Sbjct: 1397 YIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAV 1456
Query: 244 EAKKCMNEMMNRGCR-PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
A M RG PN + Y ++ GL G A +M G + ++
Sbjct: 1457 TAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAI 1516
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G+ +A + + + P++ +Y ++++GF K +SL M G+
Sbjct: 1517 IDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGI 1576
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P +F+++ L ++G D + LL +M L + ++N +I G+M+
Sbjct: 1577 FPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYS-ESGKMRKAF 1635
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM-----VTKKGRLLKLKNFL 477
DLV+ M G D Y+ + G ++ + HEM + K + + L N +
Sbjct: 1636 DLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGM 1695
Query: 478 TRVVD 482
RV D
Sbjct: 1696 CRVGD 1700
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN + L + ++ + + H+++ EN V P + Y T+I G C++G I+ A K+ D
Sbjct: 1652 TYNHIFNGLNKKSAFRESTVVLHEML-ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDE 1710
Query: 220 MTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + +A + M+ G G+ E+A ++ M+ P T+ +++ C + +
Sbjct: 1711 MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK 1770
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L M L G K +V + ++ G+C G A + ++ P++ +Y V
Sbjct: 1771 IAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAV 1830
Query: 337 VINGFCKIGKSDEAISLLKEMRARGL 362
+++ + LL +++ RGL
Sbjct: 1831 LVDAISAANNLIQGEKLLTDLQERGL 1856
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 168/347 (48%), Gaps = 40/347 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y +L+ L+++N +++ P+V + +I GYCKMG IE A K+
Sbjct: 290 LKTYGALINGLIKLNFFDKVNHILDEMIGAGF-NPNVVVFNNLIDGYCKMGNIEGALKIK 348
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNE----------------------- 251
DVM K P + +++ GFCK ++E A+ + E
Sbjct: 349 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 408
Query: 252 ------------MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
M++R RP++L ++ GLC +G+ EA L ++ G + T
Sbjct: 409 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 468
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ GLC GK +A ++ ++E + D +Y +I GFC GK + L +EM
Sbjct: 469 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 528
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RG++P ++++N + R L G+LD AI L + + N +Y ++ G C A R++
Sbjct: 529 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKAN-RIE 587
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
DVE+L + ++ L+ +Y+ ++K +C+ GNV +Q+ M +K
Sbjct: 588 DVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 634
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 153/292 (52%), Gaps = 5/292 (1%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMI 233
A F ++ N P D+ T ++ G CK G A +++ + K + + N +I
Sbjct: 414 AFRFTKMMLSRNFRPSDL-LLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALI 472
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G C G+L EA + + EM+ RG + +TYNA+I G C G+V+ L +M G +
Sbjct: 473 HGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQ 532
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
++ T+ +L+GLC VGK D A+ + + ++ +Y +++ G+CK + ++ +L
Sbjct: 533 PDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENL 592
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
E+ ++ ++ +N + + +NG + A+ LL+ M LPN +Y+++I G+C
Sbjct: 593 FNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCN 652
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
G ++D + L+D M + G + Y+ L+ GYC+ G ++ EM++
Sbjct: 653 I-GLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMIS 703
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 181/391 (46%), Gaps = 24/391 (6%)
Query: 90 HTTPCYTAI---TDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRG-NVKAAIFW 145
H CY+ + HS +L + + SD ++ L+ G +++A W
Sbjct: 394 HPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELW 453
Query: 146 FHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
F + +E G A + N+L+ L + A +++ E +P D TY +I G
Sbjct: 454 F---RLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEML-ERGLPMDRITYNALILG 509
Query: 204 YCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
+C G +E ++ + MT ++P++ YN ++ G C G+L++A K +E G N
Sbjct: 510 FCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 569
Query: 261 ELTYNAMIYGLCINGRVDEAK-----MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
TY M+ G C R+++ + +L KM LN N+ ++K C G A
Sbjct: 570 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI-----IIKAHCQNGNVAAA 624
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ L N+ + P+ +Y +I+G C IG ++A L+ EMR G P V + A+
Sbjct: 625 LQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 684
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
+ G++D A +M + PN +Y +I G C G M+ +L+ +M SG
Sbjct: 685 YCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKL-GNMEKANNLLIKMKESGIVP 743
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ L G+C+ +++N ++ +M T+
Sbjct: 744 DVVTYNVLTNGFCKANDMDNAFKVCDQMATE 774
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 146/260 (56%), Gaps = 12/260 (4%)
Query: 158 LYSYNSLLGVLVRV----NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
+Y+YN LL L V ++IKL +EF K + + ++ TY M+ GYCK IE+
Sbjct: 535 IYTYNFLLRGLCNVGKLDDAIKLWDEF-----KASGLISNIHTYGIMMEGYCKANRIEDV 589
Query: 214 KKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+ +F+ + K N + YN +I C+ G + A + + M ++G PN TY+++I+G
Sbjct: 590 ENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHG 649
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
+C G V++AK L+ +MR GF NV + +++ G C +G+ D A ++ N++P+
Sbjct: 650 VCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPN 709
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+Y V+I+G+CK+G ++A +LL +M+ G+ P V ++N + + ++D A +
Sbjct: 710 KFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCD 769
Query: 391 QMPQMDCLPNFVSYNTIICG 410
QM + ++Y T++ G
Sbjct: 770 QMATEGLPVDEITYTTLVHG 789
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 135/261 (51%), Gaps = 4/261 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
+ PD+ TY ++RG C +G +++A K++D N+ Y M+ G+CK +E+ +
Sbjct: 531 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 590
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
NE++++ N + YN +I C NG V A L+ M+ G N +T+ S++ G+
Sbjct: 591 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGV 650
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C +G + A + + + P+V Y +I G+CK+G+ D A S EM + + P
Sbjct: 651 CNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNK 710
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
F++ + + G +++A LL +M + +P+ V+YN + G C A M + + D
Sbjct: 711 FTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAN-DMDNAFKVCD 769
Query: 427 RMIRSGHNLDFTMYSCLLKGY 447
+M G +D Y+ L+ G+
Sbjct: 770 QMATEGLPVDEITYTTLVHGW 790
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 175/385 (45%), Gaps = 40/385 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + +I A G ++ AI F + +++ + +YN ++ L + + A E +
Sbjct: 221 FSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEK 280
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ + V P++ TY +I G K+ + + D M PN++ +N +I+G+CK G
Sbjct: 281 MTVKGV-QPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMG 339
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+E A K + M+++ P +T +++ G C + +++ A+ + ++ +G +
Sbjct: 340 NIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY 399
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNP--------------DVKSYE----------- 335
S++ LC ++ A + + ++ N P D K E
Sbjct: 400 SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEK 459
Query: 336 ----------VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+I+G C GK EA ++KEM RGL ++NA+ G+++
Sbjct: 460 GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGC 519
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L ++M + P+ +YN ++ GLC G++ D L D SG + Y +++
Sbjct: 520 FRLREEMTKRGIQPDIYTYNFLLRGLCNV-GKLDDAIKLWDEFKASGLISNIHTYGIMME 578
Query: 446 GYCEEGNVENVMQIAHEMVTKKGRL 470
GYC+ +E+V + +E+++KK L
Sbjct: 579 GYCKANRIEDVENLFNELLSKKMEL 603
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 181/435 (41%), Gaps = 93/435 (21%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLG---------VLVRV 171
LS+F + ++ YG+ + FH IE L+ S++G +L+ V
Sbjct: 102 LSNFDLPSILIVYGNLPVLNLDSEKFH----IEIANALFGLTSVVGRFEWTQAFDLLIHV 157
Query: 172 NSIKL-------AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--V 222
S + A + F+ + ++ P + T + K E +VF VM+
Sbjct: 158 YSTQFRNLGFSCAVDVFYLLARKGTFP-SLKTCNFXLSSLVKANEFEKCCEVFRVMSEGA 216
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P++ ++ +IN CK G++E A + +M G PN +TYN +I GLC NGR+D A
Sbjct: 217 CPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFE 276
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L KM + G + N+ T+ +++ GL + FD+ L ++ A NP+V + +I+G+C
Sbjct: 277 LKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYC 336
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR------------------ 384
K+G + A+ + M ++ + PT + ++ + ++ +++
Sbjct: 337 KMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD 396
Query: 385 -----------------AILLLKQMPQMDCLPNFVSYNTIICGLC--------------- 412
A K M + P+ + ++CGLC
Sbjct: 397 NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRL 456
Query: 413 -------------------MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
G++ + +V M+ G +D Y+ L+ G+C EG V
Sbjct: 457 LEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKV 516
Query: 454 ENVMQIAHEMVTKKG 468
E ++ EM TK+G
Sbjct: 517 EGCFRLREEM-TKRG 530
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 172/366 (46%), Gaps = 44/366 (12%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
G+V A +H+ +YNS++ L + ++ A E V +V P+
Sbjct: 24 EGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAME-----VLTVMVMPNCF 78
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY +++ GYC G E A +F M ++P+++ YN++++ CK G+ EA+K + M
Sbjct: 79 TYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSM 138
Query: 253 MNRGCRPNELTYNAMIYGLCING-----------------------------------RV 277
+ RG +P+ TY +++G G +V
Sbjct: 139 VKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKV 198
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DE ++ +KMR G N +++++ GLC +G+ D A+ +++ + P+V Y +
Sbjct: 199 DEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSL 258
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ C K ++A L+ E+ +G+ P + FN + L + G + + L + +
Sbjct: 259 IHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGV 318
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ ++Y+T+I G C+A G+M L+ M+ G D YS L+ GYC+ +E+ +
Sbjct: 319 NPDVITYSTLIDGYCLA-GKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDAL 377
Query: 458 QIAHEM 463
+ EM
Sbjct: 378 ALFKEM 383
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 170/351 (48%), Gaps = 41/351 (11%)
Query: 153 ENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
++G C + SYN+++ L + + A +H+++ V PD TY ++I K
Sbjct: 3 DDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRV-SPDAVTYNSIIAALSKAQA 61
Query: 210 IENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
++ A +V VM V PN YN++++G+C G+ E+A +M + G P+ +TYN+++
Sbjct: 62 MDRAMEVLTVM-VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMD 120
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG------------------- 310
LC NG+ EA+ + M G K +++T+ ++L G G
Sbjct: 121 YLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQL 180
Query: 311 ----------------KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
K D+ V + + + P+ +Y VI+G CK+G+ D+A+
Sbjct: 181 DHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNF 240
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
++M +GL P V + ++ L + ++A L+ ++ PN V +NTI+ LC
Sbjct: 241 EQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLC-K 299
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+GR+ + + L D + G N D YS L+ GYC G ++ M++ MV+
Sbjct: 300 EGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVS 350
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 171/364 (46%), Gaps = 40/364 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + ++ Y G + AI F + + +YNSL+ L + A + F
Sbjct: 78 FTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDS 137
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMG-----------MIENAKK----VFDVMT------- 221
+VK + PD++TY T++ GY G M++N + VF+++
Sbjct: 138 MVKRGL-KPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQE 196
Query: 222 ----------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+ PN + Y T+I+G CK G L++A +M+++G PN + Y
Sbjct: 197 KVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYT 256
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
++I+ LC + ++A+ L+ ++ G N+ ++L LC G+ ++ +
Sbjct: 257 SLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHI 316
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+NPDV +Y +I+G+C GK D A+ LL M + GLKP +++ + + ++ A
Sbjct: 317 GVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDA 376
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
+ L K+M P+ ++YN I+ GL + R ++L R+ SG L+ + Y+ +L
Sbjct: 377 LALFKEMESNGVNPDIITYNIILHGLFRTR-RTAAAKELYARITESGTQLELSTYNIILM 435
Query: 446 GYCE 449
+ +
Sbjct: 436 DFAK 439
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 172/336 (51%), Gaps = 8/336 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + L+K D + A+ H G + SY +++ + A
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+H+++ ++P DV TY ++I CK ++ A +V + M V P+ + YN++++G+C
Sbjct: 219 YHEMLDRGILP-DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G+ +EA + +M + G P+ +TY+ ++ LC NGR EA+ + M G K ++
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++L+G G + G L ++ ++PD + ++I + GK D+A+ + +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKM 397
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
R +GL P ++ AV IL ++G ++ A+L +QM P + YN++I GLC +
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN-K 456
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ E+L+ M+ G L+ ++ ++ +C+EG V
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 158/307 (51%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS+L K A F ++ + + V PDV TY+ ++ CK G A+K+FD
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT +KP + Y T++ G+ KG L E ++ M+ G P+ ++ +I G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGK 386
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A ++ +KMR G N T+ +++ LC G+ + A+ Y +++ ++P Y
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C K + A L+ EM RG+ FN++ + G + + L + M ++
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN ++YNT+I G C+A G+M + L+ M+ G + YS L+ GYC+ +E+
Sbjct: 507 VKPNVITYNTLINGYCLA-GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 457 MQIAHEM 463
+ + EM
Sbjct: 566 LVLFKEM 572
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 163/314 (51%), Gaps = 6/314 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKE--NVVPPDVSTYTTMIRGYCKMGMIENAKK 215
++SYN LL L N + A E H + + PPDV +YTT+I G+ K G + A
Sbjct: 158 VFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 216 VFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ M + P+++ YN++I CK +++A + +N M+ G P+ +TYN++++G C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+G+ EA + KMR +G + +V T+ ++ LC G+ +A ++ + + P++
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y ++ G+ G E LL M G+ P + F+ + G++D+A+L+ +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKM 397
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
Q PN V+Y +I LC + GR++D ++MI G + +Y+ L+ G C
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKS-GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 453 VENVMQIAHEMVTK 466
E ++ EM+ +
Sbjct: 457 WERAEELILEMLDR 470
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 216/463 (46%), Gaps = 57/463 (12%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P Y Y ++ H L+ + +++N + S LI AY ++G V A
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPDHYVFSILICAYANQGKVDQA 390
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + +Q +Y +++G+L + ++ A +F Q++ E + P ++ Y ++I
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI-VYNSLIH 449
Query: 203 G-----------------------------------YCKMGMIENAKKVFDVMT---VKP 224
G +CK G + ++K+F++M VKP
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N++ YNT+ING+C G+++EA K ++ M++ G +PN +TY+ +I G C R+++A +L
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M +G ++ T+ +L+GL + A + E+ ++ +Y ++++G CK
Sbjct: 570 KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
+D+A+ + + + LK +FN + L++ G D A L +PN+ +Y
Sbjct: 630 KLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ + + +G +++++ L M +G +D M + +++ + G +
Sbjct: 690 RLMAENI-IGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE-----------I 737
Query: 465 TKKGRLLKL---KNFLTRVVDALLLMWIVTGGSWISRFVFVHQ 504
T+ G L + K+F A L + +++GG + + F+ +
Sbjct: 738 TRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFLPE 780
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 162/367 (44%), Gaps = 56/367 (15%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRG 203
F + + GA +Y N L + R +S A ++++ + V PD+ TY +I
Sbjct: 38 FDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIGC 96
Query: 204 YCKMGMIENA--------KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK-CMNEMMN 254
C+ G ++ KK F V + +A+ ++ G C +A + M
Sbjct: 97 CCRAGRLDLGFAALGNVIKKGFRV-----DAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR-----------------LNGFKD--- 294
GC PN +YN ++ GLC R EA L+ M +NGF
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 295 ------------------NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+V T+ S++ LC D+A+ L +++ + PD +Y
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G+C G+ EAI LK+MR+ G++P V +++ + L +NG A + M +
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P +Y T++ G KG + ++ L+D M+R+G + D ++S L+ Y +G V+
Sbjct: 332 LKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQA 390
Query: 457 MQIAHEM 463
M + +M
Sbjct: 391 MLVFSKM 397
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 37/143 (25%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PD+ +Y ++I C+ G+ D + L + +G + +F + +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK------------ 130
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV-DRMIRSGHNLDFTMYSCLLK 445
GLC K R D D+V RM G + Y+ LLK
Sbjct: 131 -----------------------GLCADK-RTSDAMDIVLRRMTELGCIPNVFSYNILLK 166
Query: 446 GYCEEGNVENVMQIAHEMVTKKG 468
G C+E + +++ H M +G
Sbjct: 167 GLCDENRSQEALELLHMMADDRG 189
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 168/347 (48%), Gaps = 40/347 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y +L+ L+++N +++ P+V + +I GYCKMG IE A K+
Sbjct: 313 LKTYGALINGLIKLNFFDKVNHVLDEMIGSGF-NPNVVVFNNLIDGYCKMGNIEGALKIK 371
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNE----------------------- 251
DVM K P + +++ GFCK ++E A+ + E
Sbjct: 372 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 431
Query: 252 ------------MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
M++R RP++L ++ GLC +G+ EA L ++ G + T
Sbjct: 432 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 491
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ GLC GK +A ++ ++E + D +Y +I GFC GK + L +EM
Sbjct: 492 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 551
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RG++P ++++N + R L G+LD AI L + + N +Y ++ G C A R++
Sbjct: 552 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKAN-RIE 610
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
DVE+L + ++ L+ +Y+ ++K +C+ GNV +Q+ M +K
Sbjct: 611 DVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 657
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 153/292 (52%), Gaps = 5/292 (1%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMI 233
A F ++ N P D+ T ++ G CK G A +++ + K + + N +I
Sbjct: 437 AFRFTKMMLSRNFRPSDL-LLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALI 495
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G C G+L EA + + EM+ RG + +TYNA+I G C G+V+ L +M G +
Sbjct: 496 HGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQ 555
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
++ T+ +L+GLC VGK D A+ + + ++ +Y +++ G+CK + ++ +L
Sbjct: 556 PDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENL 615
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
E+ ++ ++ +N + + +NG + A+ LL+ M LPN +Y+++I G+C
Sbjct: 616 FNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCN 675
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
G ++D + L+D M + G + Y+ L+ GYC+ G ++ EM++
Sbjct: 676 I-GLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMIS 726
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 181/391 (46%), Gaps = 24/391 (6%)
Query: 90 HTTPCYTAI---TDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRG-NVKAAIFW 145
H CY+ + HS +L + + SD ++ L+ G +++A W
Sbjct: 417 HPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELW 476
Query: 146 FHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
F + +E G A + N+L+ L + A +++ E +P D TY +I G
Sbjct: 477 F---RLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEML-ERGLPMDRITYNALILG 532
Query: 204 YCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
+C G +E ++ + MT ++P++ YN ++ G C G+L++A K +E G N
Sbjct: 533 FCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 592
Query: 261 ELTYNAMIYGLCINGRVDEAK-----MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
TY M+ G C R+++ + +L KM LN N+ ++K C G A
Sbjct: 593 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI-----IIKAHCQNGNVAAA 647
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ L N+ + P+ +Y +I+G C IG ++A L+ EMR G P V + A+
Sbjct: 648 LQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 707
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
+ G++D A +M + PN +Y +I G C G M+ +L+ +M SG
Sbjct: 708 YCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKL-GNMEKANNLLIKMKESGIVP 766
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ L G+C+ +++N ++ +M T+
Sbjct: 767 DVVTYNVLTNGFCKANDMDNAFKVCDQMATE 797
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 146/260 (56%), Gaps = 12/260 (4%)
Query: 158 LYSYNSLLGVLVRV----NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
+Y+YN LL L V ++IKL +EF K + + ++ TY M+ GYCK IE+
Sbjct: 558 IYTYNFLLRGLCNVGKLDDAIKLWDEF-----KASGLISNIHTYGIMMEGYCKANRIEDV 612
Query: 214 KKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+ +F+ + K N + YN +I C+ G + A + + M ++G PN TY+++I+G
Sbjct: 613 ENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHG 672
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
+C G V++AK L+ +MR GF NV + +++ G C +G+ D A ++ N++P+
Sbjct: 673 VCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPN 732
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+Y V+I+G+CK+G ++A +LL +M+ G+ P V ++N + + ++D A +
Sbjct: 733 KFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCD 792
Query: 391 QMPQMDCLPNFVSYNTIICG 410
QM + ++Y T++ G
Sbjct: 793 QMATEGLPVDEITYTTLVHG 812
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 135/261 (51%), Gaps = 4/261 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAK 246
+ PD+ TY ++RG C +G +++A K++D N+ Y M+ G+CK +E+ +
Sbjct: 554 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 613
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
NE++++ N + YN +I C NG V A L+ M+ G N +T+ S++ G+
Sbjct: 614 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGV 673
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C +G + A + + + P+V Y +I G+CK+G+ D A S EM + + P
Sbjct: 674 CNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNK 733
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
F++ + + G +++A LL +M + +P+ V+YN + G C A M + + D
Sbjct: 734 FTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAN-DMDNAFKVCD 792
Query: 427 RMIRSGHNLDFTMYSCLLKGY 447
+M G +D Y+ L+ G+
Sbjct: 793 QMATEGLPVDEITYTTLVHGW 813
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 175/385 (45%), Gaps = 40/385 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + +I A G ++ AI F + +++ + +YN ++ L + + A E +
Sbjct: 244 FSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEK 303
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ + V P++ TY +I G K+ + V D M PN++ +N +I+G+CK G
Sbjct: 304 MTVKGV-QPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMG 362
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+E A K + M+++ P +T +++ G C + +++ A+ + ++ +G +
Sbjct: 363 NIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY 422
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNP--------------DVKSYE----------- 335
S++ LC ++ A + + ++ N P D K E
Sbjct: 423 SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEK 482
Query: 336 ----------VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+I+G C GK EA ++KEM RGL ++NA+ G+++
Sbjct: 483 GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGC 542
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
L ++M + P+ +YN ++ GLC G++ D L D SG + Y +++
Sbjct: 543 FRLREEMTKRGIQPDIYTYNFLLRGLCNV-GKLDDAIKLWDEFKASGLISNIHTYGIMME 601
Query: 446 GYCEEGNVENVMQIAHEMVTKKGRL 470
GYC+ +E+V + +E+++KK L
Sbjct: 602 GYCKANRIEDVENLFNELLSKKMEL 626
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 198/491 (40%), Gaps = 110/491 (22%)
Query: 65 QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDF 124
+ NP L FF +ASN K+ T Y + +L+ I A LL
Sbjct: 86 KANPMTCLNFFYFASNSF----KFRFTIHSYCTLILLLIRSKFIPPARLLL--------- 132
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLG---------VLVRVNSIK 175
+LI N+ + F IE L+ S++G +L+ V S +
Sbjct: 133 --IRLIDGNLPVLNLDSEKF------HIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQ 184
Query: 176 L-------AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--VKPNL 226
A + F+ + ++ P + T ++ K E +VF VM+ P++
Sbjct: 185 FRNLGFSCAVDVFYLLARKGTFP-SLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACPDV 243
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
++ +IN CK G++E A + +M G PN +TYN +I GLC NGR+D A L K
Sbjct: 244 FSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEK 303
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M + G + N+ T+ +++ GL + FD+ L ++ + NP+V + +I+G+CK+G
Sbjct: 304 MTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGN 363
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR---------------------- 384
+ A+ + M ++ + PT + ++ + ++ +++
Sbjct: 364 IEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYS 423
Query: 385 -------------AILLLKQMPQMDCLPNFVSYNTIICGLC------------------- 412
A K M + P+ + ++CGLC
Sbjct: 424 VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 483
Query: 413 ---------------MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
G++ + +V M+ G +D Y+ L+ G+C EG VE
Sbjct: 484 SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 543
Query: 458 QIAHEMVTKKG 468
++ EM TK+G
Sbjct: 544 RLREEM-TKRG 553
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 174/361 (48%), Gaps = 50/361 (13%)
Query: 155 GACL--YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIEN 212
G C+ Y+YN LL L+ + A F +++ + PDV ++ +I+G C+MG +
Sbjct: 174 GCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQK 233
Query: 213 AKKVFDVMT---------------------------------------VKPNLLAYNTMI 233
A ++ + MT PN + Y ++I
Sbjct: 234 ALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVI 293
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G+CK G++E+A N+M+ G RPN +TYN +I G ++ A + ++ L
Sbjct: 294 SGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCP 353
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+V T S++ G C G+ D A + + ++ P+V ++ ++I+ CK +S EA+ +
Sbjct: 354 PDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDI 413
Query: 354 LKEMRAR-GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
L+E+ R + P F +N V IL + G++D A L++ M + C P+ +Y +I G C
Sbjct: 414 LRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHC 473
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLD----FTMYSCLLKGYCEEGNVENVMQIA--HEMVTK 466
M KGR+ + L +M+ +G D + SC+LK V+ +M IA H + ++
Sbjct: 474 M-KGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVLKAGMPN-EVDQIMLIASGHGLASQ 531
Query: 467 K 467
K
Sbjct: 532 K 532
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 129/251 (51%), Gaps = 6/251 (2%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN-GRVD 278
++V P+ +Y +I C+ G +A K ++MM++ E + + + G C N G +D
Sbjct: 102 LSVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLD 161
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM-NPDVKSYEVV 337
A L+ K G + +L L G+ AV + ++ + +PDV S+ VV
Sbjct: 162 AASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVV 221
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD- 396
I G C++G +A+ L++ M G P + N + L ++++ +L+++ Q D
Sbjct: 222 IKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRL-QRDG 280
Query: 397 -CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C+PN V+Y ++I G C A G+M+D + + M+ SG + Y+ L+ GY + ++E+
Sbjct: 281 VCMPNAVTYTSVISGYCKA-GKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMES 339
Query: 456 VMQIAHEMVTK 466
+++ +++ +
Sbjct: 340 AVRMYRQLILR 350
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 135/284 (47%), Gaps = 15/284 (5%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCK-KGELEEA 245
VPP +Y +I C+ G +A K+FD M + L + + + G C G L+ A
Sbjct: 104 VPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAA 163
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSMLK 304
+ + GC YN ++ L +GR +A L +G + +V + ++K
Sbjct: 164 STLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIK 223
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL-K 363
G+C +G F +A+ + + E +PD ++ ++++G C+ + ++ +L+ ++ G+
Sbjct: 224 GVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCM 283
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P ++ +V + G+++ A+ + M + PN V+YN +I G G+ D+E
Sbjct: 284 PNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGY----GKALDMES 339
Query: 424 LVDRMIRS----GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
V RM R D +S L+ GYC G +++ +I EM
Sbjct: 340 AV-RMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEM 382
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 193/410 (47%), Gaps = 47/410 (11%)
Query: 114 LLKNSN-KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
LL+ S ++ + + L+ Y G+++ A + + YSY L+ L
Sbjct: 208 LLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETR 267
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAY 229
++ A ++++ P++ TYT +IRG CK G I +A+ + D M V P++ Y
Sbjct: 268 CVREALVLLLMMLQDGC-SPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTY 326
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N MI+G+CK G L++A M GC P++ TYN++I+GLC G+ DEA+ L+
Sbjct: 327 NAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIA 385
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFD------------------QAVGYLRNVM-------E 324
GF V T +++ G C K D QA G L +V+ E
Sbjct: 386 RGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKE 445
Query: 325 A----------NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A ++P+V Y +I+ +CK+GK A+ + K G +P ++++++
Sbjct: 446 AKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIY 505
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L+++ +L +A+ L+ +M + P ++Y T+I G C K + L + M ++G
Sbjct: 506 GLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQC-KKHEFDNAFRLFEMMEQNGLT 564
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
D Y+ L C+ G E A+ + KKG +L K T +VD
Sbjct: 565 PDEQAYNVLTDALCKSGRAEE----AYSFLVKKGVVLT-KVTYTSLVDGF 609
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 201/436 (46%), Gaps = 63/436 (14%)
Query: 67 NPYHALFFFNW-ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFF 125
+P AL FF W A P + HT + A+ +L + N +KL
Sbjct: 69 DPATALAFFEWVARRPG-----FRHTAASHAALLQLLARRRAPA-------NYDKL---- 112
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS---YNSLLGVLVRVNSIKLAEEFFH 182
+ +I G +++ A+ ++ S YN L L+R + + + +
Sbjct: 113 VVSMISCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYS 172
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
Q+V+E ++ PD TY TMI YCK G + A + F ++ ++ + N ++ G+C+
Sbjct: 173 QLVQEGLL-PDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRT 231
Query: 240 GELEEA----------------------------KKCMNE-------MMNRGCRPNELTY 264
G+L +A +C+ E M+ GC PN TY
Sbjct: 232 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTY 291
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+I GLC GR+ +A++L+ +M G +V T+ +M+ G C G+ A+G ++ +ME
Sbjct: 292 TLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALG-IKTLME 350
Query: 325 AN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
N NPD +Y +I+G C GK DEA LL ARG PTV +F + + ++D
Sbjct: 351 GNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKID 409
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A+ + M C + +Y +I L + K R+++ +D ++ + +G + + +Y+ +
Sbjct: 410 DALRVKSIMISSKCKLDLQAYGVLISVL-IKKHRLKEAKDTLNEIFANGLSPNVVIYTSI 468
Query: 444 LKGYCEEGNVENVMQI 459
+ YC+ G V +++
Sbjct: 469 IDAYCKVGKVGAALEV 484
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 179/393 (45%), Gaps = 57/393 (14%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ +I AY G V AA+ F K E+ C ++Y+SL+ L++ + A +
Sbjct: 466 TSIIDAYCKVGKVGAALEVF---KLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITK 522
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ +E+ + P V TYTT+I+G CK +NA ++F++M + P+ AYN + + CK G
Sbjct: 523 M-QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG 581
Query: 241 ELEEA--------------------------------KKCMNEMMNRGCRPNELTYNAMI 268
EEA + +M+N GC+ + TY+ ++
Sbjct: 582 RAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLL 641
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
LC +++EA ++ +M L G K N+ + ++ + GK D A ++ +
Sbjct: 642 QALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHK 701
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P +Y V I+ +CKIG+ +EA L+ EM G+ P V ++N G +D A
Sbjct: 702 PSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFST 761
Query: 389 LKQMPQMDCLPNFVSYNTII---CGLCMAKGRMQD------------VEDLVDRMIRSGH 433
LK+M C PN+ +Y ++ + +A D V L++RM++ G
Sbjct: 762 LKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGL 821
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
N YS ++ G+C+ +E + M+ K
Sbjct: 822 NPTAVTYSSIIAGFCKATRLEEACVLLDHMLGK 854
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 166/375 (44%), Gaps = 73/375 (19%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++YNSL+ L + AEE + + P V T+T +I GYCK I++A +V
Sbjct: 359 WTYNSLIHGLCGGKPDE-AEELLNGAIARGF-SPTVITFTNIINGYCKAEKIDDALRVKS 416
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM---------------------- 253
+M K +L AY +I+ KK L+EAK +NE+
Sbjct: 417 IMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVG 476
Query: 254 -------------NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ GCRPN TY+++IYGL + ++ +A L+ KM+ +G V T+
Sbjct: 477 KVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYT 536
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS-------- 352
++++G C +FD A + + + PD ++Y V+ + CK G+++EA S
Sbjct: 537 TLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVV 596
Query: 353 ------------------------LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
L+++M G K +++ + + L + +L+ A+ +
Sbjct: 597 LTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSI 656
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
L QM N V+Y II + + +G+ + + + MI SGH Y+ + YC
Sbjct: 657 LDQMTLRGVKGNIVAYTIIISEM-IKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYC 715
Query: 449 EEGNVENVMQIAHEM 463
+ G +E + EM
Sbjct: 716 KIGRIEEAGHLIGEM 730
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 147/277 (53%), Gaps = 5/277 (1%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y +R + M E+ K++ + + P+ + YNTMI +CK+G L A + +
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G + T NA++ G C G + +A L+ M L G + N ++ +++GLC
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ L +++ +P++ +Y ++I G CK G+ +A LL EM RG+ P+V+++NA+
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
++G L A+ + M C P+ +YN++I GLC G+ + E+L++ I G
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC--GGKPDEAEELLNGAIARGF 388
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ ++ ++ GYC+ +++ +++ M++ K +L
Sbjct: 389 SPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKL 425
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 144/316 (45%), Gaps = 21/316 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y SL+ + + + A ++V E D TY+ +++ CK + A + D
Sbjct: 601 TYTSLVDGFSKAGNTEFAAALIEKMVNEGC-KADSHTYSVLLQALCKQKKLNEALSILDQ 659
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT VK N++AY +I+ K+G+ + AK NEM++ G +P+ +TY I C GR
Sbjct: 660 MTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGR 719
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EA L+ +M NG +V T+ + G +G D A L+ +++A+ P+ +Y +
Sbjct: 720 IEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWL 779
Query: 337 VINGFCKIG----------------KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
++ F K+ K D LL+ M GL PT +++++ +
Sbjct: 780 LLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKAT 839
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
L+ A +LL M D PN Y +I C K + V MI G Y
Sbjct: 840 RLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIK-LFEKAASFVTNMIECGFQPHLESY 898
Query: 441 SCLLKGYCEEGNVENV 456
L+ G C+EG+ +
Sbjct: 899 HYLITGLCDEGDYDKA 914
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 151/346 (43%), Gaps = 42/346 (12%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L++Y L+ L + I A ++ + VVP V TY MI GYCK G +++A +
Sbjct: 288 LHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVP-SVWTYNAMIDGYCKSGRLKDALGIK 346
Query: 218 DVMT-------------------------------------VKPNLLAYNTMINGFCKKG 240
+M P ++ + +ING+CK
Sbjct: 347 TLMEGNGCNPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAE 406
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
++++A + + M++ C+ + Y +I L R+ EAK + ++ NG NV +
Sbjct: 407 KIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYT 466
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S++ C VGK A+ + P+ +Y +I G + K +A++L+ +M+
Sbjct: 467 SIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 526
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+ P V ++ + + + E D A L + M Q P+ +YN + LC + GR
Sbjct: 527 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKS-GR--- 582
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
E+ +++ G L Y+ L+ G+ + GN E + +MV +
Sbjct: 583 AEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNE 628
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 147/380 (38%), Gaps = 59/380 (15%)
Query: 95 YTAITDVLLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT++ D AA+L++ K S L++A + + A+ Q
Sbjct: 602 YTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMT 661
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ +Y ++ +++ A+ F++++ P + TYT I YCK+G I
Sbjct: 662 LRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAI-TYTVFISSYCKIGRI 720
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN------- 260
E A + M V P+++ YN ING G ++ A + M++ C PN
Sbjct: 721 EEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLL 780
Query: 261 --------------------------------------------ELTYNAMIYGLCINGR 276
+TY+++I G C R
Sbjct: 781 LKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATR 840
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EA +L+ M N + ++K C + F++A ++ N++E P ++SY
Sbjct: 841 LEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHY 900
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G C G D+A +L ++ ++ + L++ G +D LL M
Sbjct: 901 LITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRH 960
Query: 397 CLPNFVSYNTIICGLCMAKG 416
C + +Y+ + + A G
Sbjct: 961 CRIDSETYSMVTNNIHEASG 980
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 168/345 (48%), Gaps = 6/345 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
++ +I A+ ++ V A+++FH+ ++ L +Y+S++ L + S+K A E ++V
Sbjct: 282 LTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMV 341
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM----TVKPNLLAYNTMINGFCKKGE 241
K N P+V T+T++I G CK G E A ++F + KPN+ Y MI+G+CK+ +
Sbjct: 342 K-NGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEK 400
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L A+ M +G PN TY +I G C G +A LM M GF N T+ S
Sbjct: 401 LSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNS 460
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GLC G+ ++A L + + D +Y ++I+ CK ++A+ L +M G
Sbjct: 461 IVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVG 520
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+P + + + + + L ++ ++ P +Y ++ICG C K ++
Sbjct: 521 FQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREK-KVSLA 579
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+M G D Y L+ G C+E ++ Q+ M+ K
Sbjct: 580 VKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDK 624
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 163/345 (47%), Gaps = 8/345 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
S +I RG+VK A + ++NG +Y++ SL+ L + + A F ++
Sbjct: 318 SSMISGLCKRGSVKQAFELLEE--MVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKL 375
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
++ + P+V TYT MI GYCK + A+ +F+ M + PN Y T+I+G CK G
Sbjct: 376 IRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGN 435
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+A + M M N G PN TYN+++ GLC GR +EA L+ N + + T+
Sbjct: 436 FSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTI 495
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ C +QA+ +L + + PD+ Y +I FC+ ++ L E+ G
Sbjct: 496 LISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLG 555
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L PT ++ ++ ++ A+ ++M C P+ +SY +I GLC + R+ +
Sbjct: 556 LAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLC-KESRLDEA 614
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L D MI G + L YC+ + + M I + K
Sbjct: 615 RQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKK 659
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 157/339 (46%), Gaps = 41/339 (12%)
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK 223
++GV + +K A + + + +V +I +M ++E A VFD M+ +
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLT-TRVMNRIILVAAEMRLVEYAGNVFDEMSAR 238
Query: 224 ---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG---------------CR------- 258
P+ Y +I G+C+ G + EA + + EMM RG C
Sbjct: 239 GVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRA 298
Query: 259 -------------PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
PN + Y++MI GLC G V +A L+ +M NG+K NV TH S++ G
Sbjct: 299 VWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHG 358
Query: 306 LCVVGKFDQAVG-YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
LC G ++A +L+ + N P+V +Y +I+G+CK K A L + M+ +GL P
Sbjct: 359 LCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVP 418
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++ + + G +A L++ M PN +YN+I+ GLC +GR ++ L
Sbjct: 419 NTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLC-KRGRAEEAFKL 477
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ ++ D Y+ L+ C+ ++ + ++M
Sbjct: 478 LNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKM 516
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 3/228 (1%)
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+E A +EM RG P+ TY +I G C NG V EA + +M GF + +T
Sbjct: 225 VEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTL 284
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ C ++AV + V + ++P++ +Y +I+G CK G +A LL+EM G
Sbjct: 285 IITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNG 344
Query: 362 LKPTVFSFNAVFRILVENGELDRAI-LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
KP V++ ++ L + G +RA L LK + + PN +Y +I G C + ++
Sbjct: 345 WKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEE-KLSR 403
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
E L +RM G + Y+ L+ G+C+ GN ++ E+++ +G
Sbjct: 404 AEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELM-ELMSNEG 450
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
V + N+ + E ++ F +IGK EA+ ++ +MR +GL T N + + E
Sbjct: 165 VGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRL 224
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
++ A + +M P+ +Y II G C G + + + + M+ G +D +
Sbjct: 225 VEYAGNVFDEMSARGVYPDSCTYKYIIVGYC-RNGNVLEADRWICEMMERGFVVDNATLT 283
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
++ +CE+ V + H+ VTK G L N+
Sbjct: 284 LIITAFCEKSLVNRAVWFFHK-VTKMGLSPNLINY 317
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 174/347 (50%), Gaps = 51/347 (14%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN++L L + AEE ++++ + P +V T+ T IR +C+ G+++ A ++ +
Sbjct: 217 YTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEV-TFATQIRAFCQNGLLDRAVELLE 275
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M P+++ Y+T++NGF + G ++EA K +N M+ CRPN + YNA + GLCI G
Sbjct: 276 QMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAG 332
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R +E L+A+M N +T +++ LC + AV L + + PDV SY
Sbjct: 333 RWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYN 392
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV----------------------- 372
+I+ F ++D+A+ LLK M KP SFNAV
Sbjct: 393 TIISCFSDQARADDALKLLKSMLC---KPDTISFNAVLKCLCKAKRWYDAVELVAKMLKK 449
Query: 373 --------FRILV----ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
F IL+ +NG++ AI + + MP+ C+P+ V+Y+++I G Q
Sbjct: 450 DCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGF-----SEQG 504
Query: 421 VEDLVDRMIRS-GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++++ + RS D Y+ LKG C ++ ++ +MVT+
Sbjct: 505 LDEMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTE 551
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 164/344 (47%), Gaps = 38/344 (11%)
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+A + A S+N+L+ R S+ AE +V TYT +I GYC+
Sbjct: 140 EALKASGAADAVSHNTLVAGYCRDGSLGDAERVVEAARASGTA--NVVTYTALIDGYCRS 197
Query: 208 GMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
G + +A ++ M V P+ YNT++ G C + E+A++ M EM+ C PNE+T+
Sbjct: 198 GRLADALRLIASMPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQ 257
Query: 268 IYGLCINGRVDEAKMLMAKMR--------------LNGFKD------------------N 295
I C NG +D A L+ +M +NGF + N
Sbjct: 258 IRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPN 317
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
+ + LKGLC+ G++++ + ++ + P+ ++ +IN C+ + A+ +L+
Sbjct: 318 TVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLE 377
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+M+ G P V S+N + + D A+ LLK M C P+ +S+N ++ LC AK
Sbjct: 378 QMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAK 434
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
R D +LV +M++ ++ ++ L+ C+ G V++ +++
Sbjct: 435 -RWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEV 477
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 182/385 (47%), Gaps = 18/385 (4%)
Query: 86 NKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLS---DFFI-SKLIKAYGDRGNVKA 141
N H + + L+ A LL+ K D I S L+ + + G V
Sbjct: 245 NSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDE 304
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ + N C YN+ L L + E ++V+++ PP+ +T++T+I
Sbjct: 305 ALKLLNTMLCRPNTVC---YNAALKGLCIAGRWEEVGELIAEMVRKDC-PPNDATFSTLI 360
Query: 202 RGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
C+ ++E A +V + M P++++YNT+I+ F + ++A K + M+ C+
Sbjct: 361 NSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CK 417
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P+ +++NA++ LC R +A L+AKM + N T ++ LC G+ A+
Sbjct: 418 PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEV 477
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+ + PD+ +Y +INGF + G + A L + M R +FS+NA + L
Sbjct: 478 FELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCM 534
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
D A L+ M DCLPN V++N +I LC KG + D+ ++M + G D
Sbjct: 535 AARWDDAGELIADMVTEDCLPNEVTFNILISSLCQ-KGLVNRAIDVYEQMPKYGITPDIF 593
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ L+ GY E+G +++ ++ M
Sbjct: 594 TYNALINGYSEQGRLDDALKFLSTM 618
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 158/303 (52%), Gaps = 37/303 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ L + ++ A E Q+ K +P DV +Y T+I + ++A K+
Sbjct: 355 TFSTLINSLCQNRLVEYAVEVLEQMQKYGYMP-DVVSYNTIISCFSDQARADDALKLLKS 413
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M KP+ +++N ++ CK +A + + +M+ + CR NE+T+N +I LC NG+V +
Sbjct: 414 MLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKD 473
Query: 280 AK---MLMAKMR-----------LNGFKD------------------NVSTHKSMLKGLC 307
A LM K R +NGF + ++ ++ + LKGLC
Sbjct: 474 AIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLC 533
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
+ ++D A + +++ + P+ ++ ++I+ C+ G + AI + ++M G+ P +F
Sbjct: 534 MAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIF 593
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++NA+ E G LD A+ L MP C P+ +SYN+I+ GLC A+ R +D E LV
Sbjct: 594 TYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAE-RWKDAEKLVTE 649
Query: 428 MIR 430
M+R
Sbjct: 650 MLR 652
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 129/260 (49%), Gaps = 9/260 (3%)
Query: 207 MGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+G + D P +++ N +I C + L +A++ + + G + +++N
Sbjct: 97 LGGPSSTPATSDSAPEPPAVISCNILIKKLCARRRLADAERVLEALKASGA-ADAVSHNT 155
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
++ G C +G + +A+ ++ R +G NV T+ +++ G C G+ A LR +
Sbjct: 156 LVAGYCRDGSLGDAERVVEAARASGTA-NVVTYTALIDGYCRSGRLADA---LRLIASMP 211
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PD +Y V+ G C + ++A L++EM P +F R +NG LDRA+
Sbjct: 212 VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 271
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
LL+QMP+ C P+ + Y+T++ G GR+ + L++ M+ + + Y+ LKG
Sbjct: 272 ELLEQMPKYGCTPDVIIYSTLVNGF-SEHGRVDEALKLLNTMLCRPNTV---CYNAALKG 327
Query: 447 YCEEGNVENVMQIAHEMVTK 466
C G E V ++ EMV K
Sbjct: 328 LCIAGRWEEVGELIAEMVRK 347
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 4/219 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ L + +K A E F + K +P D+ TY+++I G+ + G+ E A +F
Sbjct: 457 TFNILIDSLCQNGQVKDAIEVFELMPKYRCMP-DIVTYSSLINGFSEQGLDEMAFDLFRS 515
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M + ++ +YN + G C ++A + + +M+ C PNE+T+N +I LC G V+
Sbjct: 516 MPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNR 575
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A + +M G ++ T+ +++ G G+ D A+ +L + PD SY ++
Sbjct: 576 AIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILK 632
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
G C+ + +A L+ EM + P +F ++ ++
Sbjct: 633 GLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 671
>gi|255661012|gb|ACU25675.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 376
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 155/288 (53%), Gaps = 4/288 (1%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKK 239
+++K++ D TY ++ G+CK G I + V ++ K +L AY+ MING CK+
Sbjct: 83 ELMKKSGFIEDSITYGILVHGFCKNGYINKSLHVLEIAERKGGVLDAFAYSAMINGLCKE 142
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+L++A +N M+ GC+PN YNA+I GL + ++A ++ +M + T+
Sbjct: 143 AKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKFEDAVRVVREMGTTNCSPTLVTY 202
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ GLC V +F +A ++ ++Z +NP V +Y +++ G C K + A+ L ++ +
Sbjct: 203 STLINGLCKVERFGEAYDLVKEMLZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQVTS 262
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G KP V N + L G+ A+LL M + +C PN V++NT++ G ++
Sbjct: 263 KGFKPDVQMHNILIHGLCSVGKTQLALLLYLDMNRWNCAPNLVTHNTLMEGF-YKDDDIR 321
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ + R++R+G D Y+ LKG C + + + H+ VTKK
Sbjct: 322 NALVIWARILRNGLQPDIISYNITLKGLCSCNRISDAILFLHDAVTKK 369
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 145/267 (54%), Gaps = 6/267 (2%)
Query: 205 CKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
C+ G I+ A++V+ + V P+ + YN M+NGF + G +++ + + EMM R +
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFE-LWEMMGREGSRSV 59
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
++N M+ GL NG+VDE ++ M+ +GF ++ T+ ++ G C G ++++ L
Sbjct: 60 ASFNIMMRGLFDNGKVDEVISILELMKKSGFIEDSITYGILVHGFCKNGYINKSLHVLEI 119
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
D +Y +ING CK K D+A+S+L M G KP +NA+ LV +
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASK 179
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+ A+ ++++M +C P V+Y+T+I GLC + R + DLV M+ G N YS
Sbjct: 180 FEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVE-RFGEAYDLVKEMLZKGLNPSVITYS 238
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKG 468
L+KG C VE +Q+ ++ VT KG
Sbjct: 239 LLMKGLCLGHKVEMALQLXNQ-VTSKG 264
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 4/248 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y++++ L + + A + ++K P+ Y +I G E+A +V
Sbjct: 130 FAYSAMINGLCKEAKLDKAVSVLNGMIKSGC-KPNAHVYNALINGLVGASKFEDAVRVVR 188
Query: 219 VMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M P L+ Y+T+ING CK EA + EM+ +G P+ +TY+ ++ GLC+
Sbjct: 189 EMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEMLZKGLNPSVITYSLLMKGLCLGH 248
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+V+ A L ++ GFK +V H ++ GLC VGK A+ ++ N P++ ++
Sbjct: 249 KVEMALQLXNQVTSKGFKPDVQMHNILIHGLCSVGKTQLALLLYLDMNRWNCAPNLVTHN 308
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++ GF K A+ + + GL+P + S+N + L + AIL L
Sbjct: 309 TLMEGFYKDDDIRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISDAILFLHDAVTK 368
Query: 396 DCLPNFVS 403
+P ++
Sbjct: 369 KIVPTIIT 376
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G D A + ++E+ ++PD Y ++NGF ++G+ + L EM R +V
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFELW-EMMGREGSRSV 59
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
SFN + R L +NG++D I +++
Sbjct: 60 ASFNIMMRGLFDNGKVDEVI------------------------------------SILE 83
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLL 471
M +SG D Y L+ G+C+ G + + + E+ +KG +L
Sbjct: 84 LMKKSGFIEDSITYGILVHGFCKNGYINKSLHVL-EIAERKGGVL 127
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 163/317 (51%), Gaps = 5/317 (1%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
F Q + S+N L+G RV +K A +F+ ++ + V PDV +++ +I +
Sbjct: 250 FRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEM-QHRYVTPDVVSFSCLIGLFS 308
Query: 206 KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
+ G +++A M + P+ + Y +I GFC+ G + EA + +EM+ GC P+ +
Sbjct: 309 RRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVV 368
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
TYN ++ GLC R+ +A+ L+ +M G ++ T +++ G C G F+ A+ +
Sbjct: 369 TYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTL 428
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ + PDV +Y +I+G C+ G +A L +M AR + P +++ + E G++
Sbjct: 429 LRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQV 488
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
+ A L +M + LPN +YN+II G C + G ++ + + +M + D ++
Sbjct: 489 EDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRS-GNVKKGQQFLQKMRQDNVFPDLITFNT 547
Query: 443 LLKGYCEEGNVENVMQI 459
L+ GY +E N+ +
Sbjct: 548 LIHGYIKEENMHGAFNV 564
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 161/325 (49%), Gaps = 39/325 (12%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD-VMTVKPNLLAY--NTMINGFCKK 239
+++ ++ VP S ++ + G A++ + V++ + AY N M++ +CK
Sbjct: 111 RLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKT 170
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
E + A ++EM R P+ +T+N +I G VD A L+ M G K + T+
Sbjct: 171 LEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTY 230
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S+LKGLC +FD+A R + + ++ PDV+S+ ++I GFC++G+ EA+ KEM+
Sbjct: 231 NSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQH 290
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM------------------------ 395
R + P V SF+ + + GE+D A L++M +
Sbjct: 291 RYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSE 350
Query: 396 -----------DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
CLP+ V+YNT++ GLC + R+ D E L++ M G D ++ L+
Sbjct: 351 ALRVRDEMVGFGCLPDVVTYNTLLNGLC-KQHRLLDAEKLLNEMEERGVTPDLCTFTTLI 409
Query: 445 KGYCEEGNVENVMQIAHEMVTKKGR 469
GYC +GN EN +Q+ ++ ++ R
Sbjct: 410 HGYCRQGNFENALQLFDTLLRQRLR 434
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 174/338 (51%), Gaps = 5/338 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G VK A+ ++ + + + S++ L+G+ R + A + ++
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLG 327
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+VP V YT +I G+C+ G + A +V D M P+++ YNT++NG CK+ L +A
Sbjct: 328 LVPDGV-IYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDA 386
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+K +NEM RG P+ T+ +I+G C G + A L + + +V T+ S++ G
Sbjct: 387 EKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDG 446
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+C G +A ++ + P+ +Y ++I+ C+ G+ ++A L EM +G P
Sbjct: 447 MCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPN 506
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ ++N++ + +G + + L++M Q + P+ +++NT+I G + + M ++
Sbjct: 507 IRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGY-IKEENMHGAFNVF 565
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ M + D Y+ ++ G+ E+GN+++ ++ M
Sbjct: 566 NIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGM 603
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 166/344 (48%), Gaps = 5/344 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
S LI + RG + A + + K + Y ++G R S+ A ++V
Sbjct: 300 FSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMV 359
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+P DV TY T++ G CK + +A+K+ + M V P+L + T+I+G+C++G
Sbjct: 360 GFGCLP-DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNF 418
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E A + + ++ + RP+ +TYN++I G+C G + +A L M N T+ +
Sbjct: 419 ENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSIL 478
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ C G+ + A G+L +++ P++++Y +I G+C+ G + L++MR +
Sbjct: 479 IDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNV 538
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P + +FN + ++ + A + M + P+ V+YN II G +G MQD
Sbjct: 539 FPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFS-EQGNMQDAG 597
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M SG D Y L+ G+ GN + Q+ EM+ +
Sbjct: 598 RVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHR 641
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 157/320 (49%), Gaps = 6/320 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ R + A + + P + TY ++++G CK + AK+VF
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANRGL-KPGIVTYNSVLKGLCKHRRFDKAKEVFRT 252
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +V P++ ++N +I GFC+ GE++EA K EM +R P+ ++++ +I G
Sbjct: 253 MDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGE 312
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A + +M+ G + + ++ G C G +A+ ++ PDV +Y
Sbjct: 313 MDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNT 372
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++NG CK + +A LL EM RG+ P + +F + G + A+ L + +
Sbjct: 373 LLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR 432
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+YN++I G+C KG + +L D M + YS L+ +CE+G VE+
Sbjct: 433 LRPDVVTYNSLIDGMCR-KGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDA 491
Query: 457 MQIAHEMVTKKGRLLKLKNF 476
EMV KKG L ++ +
Sbjct: 492 FGFLDEMV-KKGNLPNIRTY 510
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 113/242 (46%), Gaps = 4/242 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ LI Y +GN + A+ F + + +YNSL+ + R + A E + +
Sbjct: 405 FTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMH 464
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
++P + TY+ +I +C+ G +E+A D M K PN+ YN++I G+C+ G +
Sbjct: 465 AREILPNHI-TYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNV 523
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++ ++ + +M P+ +T+N +I+G + A + M + + T+ +
Sbjct: 524 KKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMI 583
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G G A + + ++ + PD +Y +ING G S +A L EM RG
Sbjct: 584 INGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGF 643
Query: 363 KP 364
P
Sbjct: 644 AP 645
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 169/308 (54%), Gaps = 11/308 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLY----SYNSLLGVLVRVNSIKLAEEFFHQI 184
L+K + G+++AA F K++++ Y +Y++L+G L +K A EFF ++
Sbjct: 196 LVKHHCRNGDLQAA---FEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEM 252
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
V ++ + PD TY +I G+C+ G ++ A+ + + M PN+ Y+ ++NG+CK+G
Sbjct: 253 VSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGR 312
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L+EAK+ NE+ + G +P+ ++Y +I LC GRVDEA L+ +M+ + + T
Sbjct: 313 LQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNV 372
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
ML GLC G+FD+A+ ++ + + SY +V+N + G+ +A LL M RG
Sbjct: 373 MLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRG 432
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P + N + +L NG + A+ L + +M P S+ T++ +C + +M V
Sbjct: 433 FVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRER-KMLPV 491
Query: 422 EDLVDRMI 429
+L+D ++
Sbjct: 492 FELLDVLV 499
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 191/409 (46%), Gaps = 15/409 (3%)
Query: 60 KVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSH----SLISIAASLL 115
K+I + +P HAL FN S ++H Y +I L + ++ + +
Sbjct: 55 KLIKNERDPQHALDIFNMVSEQQG----FNHNHATYASIIQNLAKYKKFQAIDGVLHQMT 110
Query: 116 KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQI-ENGACLYSYNSLLGVLVRVNSI 174
++ K+ + L+K + + + F+ K I L + ++ L +LV + +
Sbjct: 111 YDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRV 170
Query: 175 KLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYN 230
LA + + + P+ + +++ +C+ G ++ A +V M PNL+ Y+
Sbjct: 171 DLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYS 230
Query: 231 TMINGFCKKGELEEAKKCMNEMMNR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
T+I G C+ G+L+EA + EM+++ P+ LTYN +I G C G+VD A+ ++ M+
Sbjct: 231 TLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKS 290
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
NG NV + ++ G C G+ +A + M PD SY +IN C+ G+ DE
Sbjct: 291 NGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDE 350
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A LL++M+ + + +FN + L G D A+ +++++P N SY I+
Sbjct: 351 ATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYR-IVL 409
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
KG ++ +L+ M+ G + LL C G V++ ++
Sbjct: 410 NFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVE 458
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 212/465 (45%), Gaps = 62/465 (13%)
Query: 67 NPYHALFFFNW-ASNPNPNPNKYHHTTPCYTAITDVLLSHSLIS----IAASLLKNSNKL 121
+P AL FF W A P + HT + A+ +L + + S++ S+
Sbjct: 67 DPATALAFFEWVARRPG-----FRHTAASHAALLQLLARRRAPANYDKLVVSMVSCSDTA 121
Query: 122 SDFFIS----KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLA 177
D + + I+ G G+++ A + + YSY L+ L ++ A
Sbjct: 122 EDMREAVDAIQAIRRVG--GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREA 179
Query: 178 EEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMIN 234
+V++ ++ TYT +I+G CK G I A++V + M ++ P++ YN MI+
Sbjct: 180 LVLLVMMVQDGC-SLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMID 238
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
G+CK G +++A M GC P++ TYN +IYGLC + DEA+ L+ + GF
Sbjct: 239 GYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTP 297
Query: 295 NVSTHKSMLKGLCVVGKFD------------------QAVGYLRNVM-------EA---- 325
V T +++ G C + D QA G L NV+ EA
Sbjct: 298 TVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETV 357
Query: 326 ------NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ P+V Y +I+G+CK+GK A+ + + M G +P ++++++ L+++
Sbjct: 358 SEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQD 417
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
+L +A+ L+ +M + P ++Y T+I G C K + L + M ++G D
Sbjct: 418 QKLHKAMALITKMQEDGITPGVITYTTLIQGQC-KKHEFDNAFRLFEMMEQNGLTPDEQA 476
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
Y+ L C+ G E A+ + +KG +L K T +VD
Sbjct: 477 YNVLTHALCKSGRAEE----AYSFLVRKGVVLT-KVTYTSLVDGF 516
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 176/383 (45%), Gaps = 57/383 (14%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ +I Y G V AA+ F + +E+ C ++Y+SL+ L++ + A +
Sbjct: 373 TSIIDGYCKVGKVGAALEVF---RLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITK 429
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ +E+ + P V TYTT+I+G CK +NA ++F++M + P+ AYN + + CK G
Sbjct: 430 M-QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG 488
Query: 241 ELEEAKK--------------------------------CMNEMMNRGCRPNELTYNAMI 268
EEA + +M+N GC+ + TY+ ++
Sbjct: 489 RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLL 548
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
LC +++EA ++ +M L+G K N+ + ++ + GK D A ++ +
Sbjct: 549 QALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHK 608
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P +Y V I+ +CKIG+ +EA L+ EM G+ P V ++N G +DRA
Sbjct: 609 PSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFST 668
Query: 389 LKQMPQMDCLPNFVSYNTII---CGLCMAKGRMQD------------VEDLVDRMIRSGH 433
LK+M C PN+ +Y ++ + + D V L++RM++ G
Sbjct: 669 LKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGL 728
Query: 434 NLDFTMYSCLLKGYCEEGNVENV 456
N YS ++ G+C+ +E
Sbjct: 729 NPTAVTYSSIIAGFCKATRLEEA 751
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 159/357 (44%), Gaps = 72/357 (20%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---------------- 220
AEE + + P V T+T +I GYCK I++A +V M
Sbjct: 283 AEELLNDAIVRGFTPT-VITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLI 341
Query: 221 ----------------------TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
+ PN++ Y ++I+G+CK G++ A + M + GCR
Sbjct: 342 NVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCR 401
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
PN TY+++IYGL + ++ +A L+ KM+ +G V T+ ++++G C +FD A
Sbjct: 402 PNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRL 461
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS-------------------------- 352
+ + + PD ++Y V+ + CK G+++EA S
Sbjct: 462 FEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGN 521
Query: 353 ------LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
L+++M G K ++++ + + L + +L+ A+ +L QM N V+Y
Sbjct: 522 TDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTI 581
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
II + + +G+ + + + MI SGH T Y+ + YC+ G +E + EM
Sbjct: 582 IISEM-IKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEM 637
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 145/314 (46%), Gaps = 21/314 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y SL+ + + A ++V E D TY+ +++ CK + A + D
Sbjct: 508 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGC-KADSYTYSVLLQALCKQKKLNEALSILDQ 566
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT VK N++AY +I+ K+G+ + AK NEM++ G +P+ TY I C G+
Sbjct: 567 MTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQ 626
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EA+ L+ +M +G +V T+ + G +G D+A L+ +++A+ P+ +Y +
Sbjct: 627 IEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWI 686
Query: 337 VINGFCKIG----------------KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
++ F K+ + D LL+ M GL PT +++++ +
Sbjct: 687 LLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKAT 746
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
L+ A +L M D PN Y +I C K + V + D MI G Y
Sbjct: 747 RLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTD-MIEFGFQPHLESY 805
Query: 441 SCLLKGYCEEGNVE 454
L+ G C+EG+ +
Sbjct: 806 HYLIVGLCDEGDYD 819
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 150/346 (43%), Gaps = 42/346 (12%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L++Y L+ L + I A ++ VVP V TY MI GYCK G +++A +
Sbjct: 195 LHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPS-VWTYNAMIDGYCKSGRMKDALGIK 253
Query: 218 DVMT-------------------------------------VKPNLLAYNTMINGFCKKG 240
+M P ++ + +ING+CK
Sbjct: 254 ALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAE 313
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+++A + M++ C+ + Y +I L R EAK +++M NG NV +
Sbjct: 314 RIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYT 373
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S++ G C VGK A+ R + P+ +Y +I G + K +A++L+ +M+
Sbjct: 374 SIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 433
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+ P V ++ + + + E D A L + M Q P+ +YN + LC + GR
Sbjct: 434 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKS-GR--- 489
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
E+ ++R G L Y+ L+ G+ + GN + + +MV +
Sbjct: 490 AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE 535
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 31/282 (10%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
+Y + ++ I+ AE ++ ++ V P DV TY I G MG ++ A K+
Sbjct: 613 TYTVFISSYCKIGQIEEAEHLIGEMERDGVAP-DVVTYNVFINGCGHMGYMDRAFSTLKR 671
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKG----------------ELEEAKKCMNEMMNRGCRP 259
+ D + +PN Y ++ F K EL+ + + M+ G P
Sbjct: 672 MIDA-SCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNP 730
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+TY+++I G C R++EA +L MR N + ++K C + F +AV ++
Sbjct: 731 TAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFV 790
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV-FRI--- 375
+++E P ++SY +I G C G D+A SL ++ L ++ N V ++I
Sbjct: 791 TDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDL----LGMEDYNHNEVAWKILND 846
Query: 376 -LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
L++ G +D LL M C + +Y+ + + A G
Sbjct: 847 GLLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTDNIHEASG 888
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 184/367 (50%), Gaps = 15/367 (4%)
Query: 107 LISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE-NGACLYSY 161
L+ +A+LL ++ ++ + +KL+ + RG V + F + Q ++S+
Sbjct: 193 LLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSF 252
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
N ++ + RV ++ A E ++ E PD T+ ++ G C+ + +V +
Sbjct: 253 NVVIKGVCRVGQVQKALELVERM-NEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQ 311
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
PN++ + ++I+G+CK G+LE+A N+M+ G PN +TYN +I G G +
Sbjct: 312 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDL 371
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A + +M +V T S++ G C G+ D A+ ++ + + P+V ++ ++
Sbjct: 372 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 431
Query: 338 INGFCKIGKSDEAISLLKEMRAR-GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
I+ CK +SDEAI LL E+ R + P F +N V +L + G++D A L+ K M +
Sbjct: 432 IHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 491
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG---NV 453
C P+ +Y +I G CM K R+ + M+ +G + D +C + + G V
Sbjct: 492 CRPDKYTYTILIIGYCM-KSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEV 550
Query: 454 ENVMQIA 460
++VM++A
Sbjct: 551 DHVMRLA 557
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 155/311 (49%), Gaps = 6/311 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN L+ L+ + F + +++ + PDV ++ +I+G C++G ++ A ++ +
Sbjct: 214 YAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVE 273
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLCIN 274
M P+ + +N +++G C+ E+ + + + G C PN +T+ ++I G C
Sbjct: 274 RMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKA 333
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++++A + M +G N T+ ++ G VG AV + + PDV ++
Sbjct: 334 GKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTF 393
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP- 393
+I+G+C+ G+ D+A+ + +M ++P V++F+ + L + D AI LL ++
Sbjct: 394 SSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNL 453
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ D P YN +I LC G++ + + M G D Y+ L+ GYC + +
Sbjct: 454 RPDIAPQAFIYNPVIDVLCKC-GKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRI 512
Query: 454 ENVMQIAHEMV 464
+ HEMV
Sbjct: 513 SEAIMFFHEMV 523
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 214/473 (45%), Gaps = 57/473 (12%)
Query: 61 VIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----K 116
+I Q N A F++A +P + HT Y +I D L SLL +
Sbjct: 21 MITHQENLDLAFQIFDYAGKYHPG---FSHTYDTYHSIIDKLSRARAFDGVESLLSQLSR 77
Query: 117 NSNKL---SDFFISKLIKAYGDRGNVKAAIFWFHQAKQ-IENGACLYSYNSLLGVLVRVN 172
NS+ + D FIS +I+ YG G + A+ F + K+ + N+LL V V+
Sbjct: 78 NSSHIKCGDDVFIS-VIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNK 136
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAY 229
L + V P+V ++ +I+ CK +ENA KVFD M + PNL+ Y
Sbjct: 137 RYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTY 196
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
T++ GF +G+L A+K +E+ ++G P+ TY ++ G C GR+ +A +M M
Sbjct: 197 TTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEY 256
Query: 290 NGFKDNVSTHKSMLKG-----------------------------------LCVVGKFDQ 314
NG + N T+ M+ LC GK +
Sbjct: 257 NGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVEN 316
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A + ++E N PD +I+ CK GK EA L E +G P++ ++N +
Sbjct: 317 ACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFE-QGTIPSLMTYNTLIA 375
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+ E GEL+ A L M + C PN +YN +I G M G +++ +++ M+ +G
Sbjct: 376 GMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGF-MKAGVVKEGVRILEEMLDNGCL 434
Query: 435 LDFTMYSCLLKGYCE---EGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
+ + Y+ L++G E EG+V+ VM +A M +++ FL ++V L
Sbjct: 435 PNKSTYTLLIEGLQESGMEGDVDKVMSMA--MASREVDADSWDLFLHKIVGNL 485
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 132/340 (38%), Gaps = 77/340 (22%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LIKA + +V+ A+ F + + L +Y ++LG V + AE+ F +
Sbjct: 159 FSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSE 218
Query: 184 IVKENVVP----------------------------------PDVSTYTTMIRGYCKM-- 207
I + +P P+ TY MI YCK
Sbjct: 219 ISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKK 278
Query: 208 ---------------------------------GMIENAKKVFDVMTVK---PNLLAYNT 231
G +ENA ++ M K P+ +T
Sbjct: 279 SGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMST 338
Query: 232 MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG 291
+I+ CK+G++ EA+K +E +G P+ +TYN +I G+C G ++EA L M
Sbjct: 339 LIHWLCKEGKVWEARKLFDEF-EQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKR 397
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
+ N T+ ++KG G + V L +++ P+ +Y ++I G + G +
Sbjct: 398 CRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVD 457
Query: 352 SLLK-EMRARGLKP---TVFSFNAVFRILVENGELDRAIL 387
++ M +R + +F V + G LDR ++
Sbjct: 458 KVMSMAMASREVDADSWDLFLHKIVGNLDCGTGALDRLLM 497
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/517 (23%), Positives = 226/517 (43%), Gaps = 94/517 (18%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVL-----LSHSLISI 110
++V V++ P HAL FF W H + I +L L+H+ +
Sbjct: 116 SLVYNVLHGARKPDHALQFFRWVERAG----LIQHDRETHMKIIQILGRYSMLNHARCIV 171
Query: 111 AASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVR 170
+ K +L + LI +YG G V+ ++ F + K++ + SYN+L V+VR
Sbjct: 172 LEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIVR 231
Query: 171 VNSIKLAEEFFHQIVKENVVP----------------------------------PDVST 196
+A+ FF++++ E + P PDV T
Sbjct: 232 KGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVT 291
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y TMI GY + +E A+K+F M K P +++Y TMI G+ + + + + EM
Sbjct: 292 YNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRINDGLRLLEEMK 351
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM--RLNGFKDNVSTHKSMLKGLCVVGK 311
+ G +PN +TY ++ LC G++ EAK ++ +M R KDN S +L C G
Sbjct: 352 SVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKEMVRRRIAPKDN-SIFLKLLNSQCKAGD 410
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG--LKPTVF-- 367
AV L +++ ++ + Y V+I FCK + D+A+ + ++ L+P
Sbjct: 411 LKAAVDVLDGMIKLSIPSEAGHYGVLIENFCKAEEYDQAVKFVDKLIENDIILRPQSTLE 470
Query: 368 ----SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC----------- 412
++N V + L +G+ +A +L +Q+ + + + +++N +ICG
Sbjct: 471 MESGAYNPVIQYLCSHGQTGKAEILFRQLLK-KGVEDPLAFNNLICGHAKEGTPDSAFEI 529
Query: 413 -----------------------MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+ KG D + +D MI GH D +++ +++ E
Sbjct: 530 LKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYE 589
Query: 450 EGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLL 486
+G V+ ++ MV K + + + + ++++ALL+
Sbjct: 590 DGRVQTASRVMKSMVEKGVK--ENMDLVAKILEALLM 624
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 136/309 (44%), Gaps = 48/309 (15%)
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
++E+GA YN ++ L AE F Q++K+ V P + +I G+ K G
Sbjct: 470 EMESGA----YNPVIQYLCSHGQTGKAEILFRQLLKKGVEDP--LAFNNLICGHAKEGTP 523
Query: 211 ENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
++A ++ +M K + AY +I + +KGE +AK ++ M+ G P+ + ++
Sbjct: 524 DSAFEILKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSV 583
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ L +GRV A +M M G K+N+ +L+ L + G ++A+G + +M +
Sbjct: 584 MESLYEDGRVQTASRVMKSMVEKGVKENMDLVAKILEALLMRGHEEEALGRIDLLMSSQC 643
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
N +F+++ IL E G+ A+
Sbjct: 644 N--------------------------------------VNFDSLLSILSEKGKTIAALK 665
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LL Q DC +F SY+ ++ L +A G+ + ++ +++ G + Y L+K
Sbjct: 666 LLDFGLQRDCDIDFKSYDKVLDAL-LAAGKTLNAYSILCKIMEKGGVTSWRSYEDLIKSL 724
Query: 448 CEEGNVENV 456
+EGN +
Sbjct: 725 NQEGNTKQA 733
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 142/351 (40%), Gaps = 43/351 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +LL L + A++ ++V+ + P D S + ++ CK G ++ A V D
Sbjct: 361 TYTTLLPDLCDAGKMTEAKDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVDVLDG 420
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC--RPNEL------TYNAMI 268
M ++ Y +I FCK E ++A K +++++ RP YN +I
Sbjct: 421 MIKLSIPSEAGHYGVLIENFCKAEEYDQAVKFVDKLIENDIILRPQSTLEMESGAYNPVI 480
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
LC +G+ +A++L ++ G +D ++ + +++ G G D A L+ + +
Sbjct: 481 QYLCSHGQTGKAEILFRQLLKKGVEDPLAFN-NLICGHAKEGTPDSAFEILKIMGRKGIP 539
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
D +Y ++I + + G+ +A + L M G P F +V L E+G + A +
Sbjct: 540 RDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGRVQTASRV 599
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCM-------------------------------AKGR 417
+K M + N I+ L M KG+
Sbjct: 600 MKSMVEKGVKENMDLVAKILEALLMRGHEEEALGRIDLLMSSQCNVNFDSLLSILSEKGK 659
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
L+D ++ ++DF Y +L G N I +++ K G
Sbjct: 660 TIAALKLLDFGLQRDCDIDFKSYDKVLDALLAAGKTLNAYSILCKIMEKGG 710
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 192/428 (44%), Gaps = 34/428 (7%)
Query: 64 EQTNPYH---ALFFFNWASNPNPNPN-KYHHTTPCYTAITDVLLSHSLISIAASLLKN-- 117
+Q P H AL F W P + H T Y +L+ + A S+L++
Sbjct: 83 KQLRPVHGRLALKFLKWVIK---QPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLC 139
Query: 118 -------------------SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL 158
N + F LI+ Y G + A+ F + +
Sbjct: 140 QMGIGSKSIFGALMDTYPLCNSIPSVF-DLLIRVYLKEGMIDYAVETFELVGLVGFKPSV 198
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+ N +L +V+ +L F ++ + + P +V T+ +I G C G ++ A +
Sbjct: 199 YTCNMILASMVKDKRTELVWSLFREMSDKGICP-NVGTFNILINGLCVEGNLKKAGNLLK 257
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M P ++ YNT++N +CKKG + A + ++ M+ +G + TYN I LC N
Sbjct: 258 QMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNH 317
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R +A +L+ KMR N T+ +++ G GK A + + +++P+ +Y
Sbjct: 318 RSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYN 377
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I G C +G +EA+ LL M A GL+ ++ + L ++ + + A LL++M
Sbjct: 378 ALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVN 437
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
D + ++Y +I GLC G + + LV M + G N D YS L+ G+C GN+++
Sbjct: 438 DMVVGHIAYTVLIDGLC-KNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKS 496
Query: 456 VMQIAHEM 463
+I M
Sbjct: 497 AKEIICRM 504
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 147/297 (49%), Gaps = 5/297 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ V+ I +A + F+++ K ++ P+ TY +I G+C +G E A ++ D
Sbjct: 340 TYNTLINGFVKEGKIGVAAQVFNEMSKFDL-SPNCVTYNALIGGHCHVGDFEEALRLLDH 398
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ N + Y T++NG CK + E AK+ + M + Y +I GLC NG
Sbjct: 399 MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGM 458
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEA L+ M +G +V T+ S++ G C VG A + + + + + Y
Sbjct: 459 LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYST 518
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I FC+ G EA+ + M G F+ N + L +G+L A L M ++
Sbjct: 519 LIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIG 578
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+PN ++Y+ II G + G + D MI+ G + F Y LLKG C+ GN+
Sbjct: 579 LVPNSITYDCIINGYG-SIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 634
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 178/367 (48%), Gaps = 15/367 (4%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFIS-------KLIKAYGDRGNVKAAIFWFH 147
Y + + + I +AA + N++S F +S LI + G+ + A+
Sbjct: 341 YNTLINGFVKEGKIGVAAQVF---NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 397
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ +Y +LL L + +LA+ ++ ++V ++ YT +I G CK
Sbjct: 398 HMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA-YTVLIDGLCKN 456
Query: 208 GMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
GM++ A ++ M V P+++ Y+++INGFC+ G ++ AK+ + M G N++ Y
Sbjct: 457 GMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIY 516
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+ +IY C +G V EA + A M NG + T ++ LC GK +A +L ++
Sbjct: 517 STLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSR 576
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P+ +Y+ +ING+ IG A S +M G P+ F++ ++ + L + G L
Sbjct: 577 IGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVE 636
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A L ++ + + V YNT++ C + G + + L D+M+++ D YS LL
Sbjct: 637 AKKFLNRLHYIPGAVDSVMYNTLLAETCKS-GNLHEAVALFDKMVQNNVLPDSYTYSSLL 695
Query: 445 KGYCEEG 451
G C +G
Sbjct: 696 TGLCRKG 702
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 174/411 (42%), Gaps = 79/411 (19%)
Query: 129 LIKAYGDRGNVKAAI--FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
L+ Y +G KAAI + K IE C +YN + L + A ++ K
Sbjct: 274 LLNWYCKKGRYKAAIELIDYMICKGIEADVC--TYNVFIDNLCTNHRSAKAYLLLKKMRK 331
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
E + P +V TY T+I G+ K G I A +VF+ M+ + PN + YN +I G C G+ E
Sbjct: 332 EMISPNEV-TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 390
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + ++ M G R NE+TY ++ GLC + + + AK L+ +MR+N + ++
Sbjct: 391 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 450
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING----------------------- 340
GLC G D+AV + N+ + +NPDV +Y +ING
Sbjct: 451 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 510
Query: 341 ------------FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
FC+ G EA+ + M G F+ N + L +G+L A
Sbjct: 511 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 570
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
L M ++ +PN ++Y+ II G + G + D MI+ G + F Y LLKG C
Sbjct: 571 LCHMSRIGLVPNSITYDCIINGYG-SIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 629
Query: 449 -----------------------------------EEGNVENVMQIAHEMV 464
+ GN+ + + +MV
Sbjct: 630 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV 680
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 153/336 (45%), Gaps = 44/336 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI GN+K A Q + ENG + +YN+LL + K A E ++
Sbjct: 239 LINGLCVEGNLKKAGNLLKQME--ENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMIC 296
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ + DV TY I C A + M + PN + YNT+INGF K+G++
Sbjct: 297 KGI-EADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 355
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + NEM PN +TYNA+I G C G +EA L+ M G + N T+ ++L
Sbjct: 356 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 415
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GLC KF+ A L + +M +Y V+I+G CK G DEA+ L+ M G+
Sbjct: 416 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 475
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++Y+++I G C G ++ ++
Sbjct: 476 PDV-----------------------------------ITYSSLINGFCRV-GNIKSAKE 499
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
++ RM RSG L+ +YS L+ +C+ GNV M++
Sbjct: 500 IICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 535
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 169/385 (43%), Gaps = 9/385 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
PN Y Y +I D L + S ++K S F L+K GN+ A
Sbjct: 581 PNSITYDCIINGYGSIGDPLNAFSFFD---DMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 637
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ ++ I YN+LL + ++ A F ++V+ NV+P D TY++++
Sbjct: 638 KKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP-DSYTYSSLLT 696
Query: 203 GYCKMGMIENAKKVFDVM----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
G C+ G A +F T+ PN + Y +++G K G + A EMM +G
Sbjct: 697 GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC 756
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P+ + +NA+I G++ +A + MR G N++T+ +L G + +
Sbjct: 757 PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 816
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+M + PD ++ +I G K G D + LL +M G F+FN + E
Sbjct: 817 YSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSE 876
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
+G++ +A L+ M + P+ +YN I GL K ++ ++ M+ +G
Sbjct: 877 SGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL-NKKSAFRESTVVLHEMLENGVIPKHA 935
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEM 463
Y L+ G C G+++ ++ EM
Sbjct: 936 QYITLINGMCRVGDIQGAFKLKDEM 960
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 156/383 (40%), Gaps = 39/383 (10%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
L+ S LI + GNV A+ + +GA ++ N L+ L R + AE+F
Sbjct: 511 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 570
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+ + +VP + TY +I GY +G NA FD M P+ Y +++ G C
Sbjct: 571 LCHMSRIGLVPNSI-TYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 629
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G L EAKK +N + + + YN ++ C +G + EA L KM N +
Sbjct: 630 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 689
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVM-EANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ S+L GLC GK AV M + P+ Y +++G K G A +E
Sbjct: 690 TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 749
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG------ 410
M +G P +FNA+ G++ +A M PN +YN ++ G
Sbjct: 750 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQA 809
Query: 411 ---------------------------LCMAKGRMQDVE-DLVDRMIRSGHNLDFTMYSC 442
L ++K + D+ L+ +MI G D ++
Sbjct: 810 LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNI 869
Query: 443 LLKGYCEEGNVENVMQIAHEMVT 465
L+ Y E G + + + M T
Sbjct: 870 LINKYSESGKMRKAFDLVNFMNT 892
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 164/400 (41%), Gaps = 45/400 (11%)
Query: 105 HSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS---Y 161
H +++ +++N+ + S L+ +G A+ F A + G + Y
Sbjct: 670 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTA--MGRGTLFPNHVMY 727
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
L+ L + K A FF +++K+ P D + +I + G + A F M
Sbjct: 728 TCLVDGLSKAGHPKAAFYFFEEMMKKGTCP-DTVAFNAIIDSCSRRGQMMKANDFFSTMR 786
Query: 222 ---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
V PNL YN +++GF KK L + MM G P++LT++++I GL +G D
Sbjct: 787 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 846
Query: 279 EAKMLMAKMRLNG-----FKDNV------------------------------STHKSML 303
L+ KM + G F N+ T+ +
Sbjct: 847 LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 906
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GL F ++ L ++E + P Y +ING C++G A L EM A G
Sbjct: 907 NGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 966
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+ +A+ R L+ G+ + A+L+L M +M LP ++ T++ C ++ +
Sbjct: 967 SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFC-RDAKIAEALK 1025
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L M G LD Y+ L+ G C G+ ++ EM
Sbjct: 1026 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEM 1065
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 4/275 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+++SL+ L + L + +++ E + D T+ +I Y + G + A + +
Sbjct: 831 TFHSLILGLSKSGIPDLGVKLLGKMIMEGTLA-DQFTFNILINKYSESGKMRKAFDLVNF 889
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+ YN + NG KK E+ ++EM+ G P Y +I G+C G
Sbjct: 890 MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 949
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ A L +M GF + +M++GL GK + A+ L +++ + P + ++
Sbjct: 950 IQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTT 1009
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++ FC+ K EA+ L M GLK V ++N + + NG+ A L ++M D
Sbjct: 1010 LMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1069
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
PN +Y ++ + A +Q + L D R
Sbjct: 1070 LCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 15/365 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I YG G+ A +F + ++Y SLL L + ++ A++F +++ +
Sbjct: 589 IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL---H 645
Query: 189 VVPPDVST--YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+P V + Y T++ CK G + A +FD M V P+ Y++++ G C+KG+
Sbjct: 646 YIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAV 705
Query: 244 EAKKCMNEMMNRGCR-PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
A M RG PN + Y ++ GL G A +M G + ++
Sbjct: 706 TAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAI 765
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G+ +A + + + P++ +Y ++++GF K +SL M G+
Sbjct: 766 IDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGI 825
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P +F+++ L ++G D + LL +M L + ++N +I G+M+
Sbjct: 826 FPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYS-ESGKMRKAF 884
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM-----VTKKGRLLKLKNFL 477
DLV+ M G D Y+ + G ++ + HEM + K + + L N +
Sbjct: 885 DLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGM 944
Query: 478 TRVVD 482
RV D
Sbjct: 945 CRVGD 949
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN + L + ++ + + H+++ EN V P + Y T+I G C++G I+ A K+ D
Sbjct: 901 TYNHIFNGLNKKSAFRESTVVLHEML-ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDE 959
Query: 220 MTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + +A + M+ G G+ E+A ++ M+ P T+ +++ C + +
Sbjct: 960 MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK 1019
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L M L G K +V + ++ G+C G A + ++ P++ +Y V
Sbjct: 1020 IAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAV 1079
Query: 337 VINGFCKIGKSDEAISLLKEMRARGL 362
+++ + LL +++ RGL
Sbjct: 1080 LVDAISAANNLIQGEKLLTDLQERGL 1105
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 190/386 (49%), Gaps = 9/386 (2%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE 153
C+ + + LS S++ A++LK ++ LIK RG VK A+ + +E
Sbjct: 113 CFCHLGQITLSFSVL---ATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALE 169
Query: 154 NGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
SY +L+ L ++ K A + + +E + PDV Y +I CK ++ A
Sbjct: 170 FQLDRISYGTLINGLCKIGETKAAIQLMRNL-EERSIKPDVVMYNIIIDSLCKNKLVGEA 228
Query: 214 KKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
++ M K PN++ Y T+I GFC G L EA +NEM + P+ T++ +I
Sbjct: 229 CNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDA 288
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
L G++ AK+++A M K +V T+ S++ G +V + A ++ ++ + P
Sbjct: 289 LGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPG 348
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V+SY ++I+G CK DEAISL +EM+ + + P +FN++ L ++G + L+
Sbjct: 349 VQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVD 408
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M L + ++Y+++I LC + L +MI D Y+ L+ G C+
Sbjct: 409 KMRDRSQLADVITYSSLIDALC-KNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKG 467
Query: 451 GNVENVMQIAHEMVTKKGRLLKLKNF 476
G ++ ++ ++ KG L ++ +
Sbjct: 468 GRLKIAQEVFQHLLI-KGYHLDIRTY 492
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 169/345 (48%), Gaps = 9/345 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDF----FISKLIKAYGDRGNVKAAIFWFHQAK 150
Y I D L + L+ A +L N + + LI + G + A+ ++ K
Sbjct: 212 YNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMK 271
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+Y+++ L+ L + +K A+ ++K V PDV TY +++ GY + +
Sbjct: 272 LKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKA-YVKPDVVTYNSLVDGYFLVNEV 330
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
++AK VF+ M V P + +Y MI+G CK ++EA EM ++ PN +T+N++
Sbjct: 331 KHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSL 390
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I GLC +GR+ L+ KMR +V T+ S++ LC DQA+ + ++ +
Sbjct: 391 IDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEI 450
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD+ +Y ++I+G CK G+ A + + + +G + ++ + + G D A+
Sbjct: 451 QPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALA 510
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
LL +M C+PN ++++ IIC L K E L+ MI G
Sbjct: 511 LLSKMEDNGCIPNAITFDIIICAL-FEKDENDKAEKLLREMIARG 554
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 110 IAASLLKNSNKLSD-----FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL 164
I A L N KL + + S LI A G G +KAA + + +YNSL
Sbjct: 261 IEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSL 320
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK- 223
+ VN +K A+ F+ + + V P V +YT MI G CK M++ A +F+ M K
Sbjct: 321 VDGYFLVNEVKHAKYVFNSMAQSGVTP-GVQSYTIMIDGLCKTKMVDEAISLFEEMKHKN 379
Query: 224 --PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
PN + +N++I+G CK G + +++M +R + +TY+++I LC N +D+A
Sbjct: 380 VIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAI 439
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L KM + ++ T+ ++ GLC G+ A ++++ + D+++Y V+I+GF
Sbjct: 440 ALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGF 499
Query: 342 CKIGKSDEAISLL-----------------------------------KEMRARGL 362
CK G DEA++LL +EM ARGL
Sbjct: 500 CKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 196/462 (42%), Gaps = 95/462 (20%)
Query: 79 SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGN 138
S P+ + + + H+ CY S S + A+++L + + Y + +
Sbjct: 10 SAPSLSVSLFRHSLLCY--------SQSACTRASAMLHSQSH------------YNNHND 49
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
A+ F++ + + +N++L LV++ A + + + D+ T
Sbjct: 50 HNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITS-DLVTLN 108
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKK-------- 247
+I +C +G I + V + + P+++ T+I G C +GE+++A K
Sbjct: 109 ILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVAL 168
Query: 248 ---------------------------CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
M + R +P+ + YN +I LC N V EA
Sbjct: 169 EFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEA 228
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
L ++M NV T+ +++ G C++G +AV L + N+NPDV ++ ++I+
Sbjct: 229 CNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDA 288
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNA----------------VFRILVENG---- 380
K GK A +L M +KP V ++N+ VF + ++G
Sbjct: 289 LGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPG 348
Query: 381 ---------------ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+D AI L ++M + +PN +++N++I GLC + GR+ V DLV
Sbjct: 349 VQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKS-GRIAYVWDLV 407
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D+M D YS L+ C+ +++ + + +M+T++
Sbjct: 408 DKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQE 449
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
++A++L M P F FN + LV+ AI L K + + V+ N +
Sbjct: 51 NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
I C G++ ++ +++ G++ D + L+KG C G V+ ++ ++V +
Sbjct: 111 INCFCHL-GQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALE 169
Query: 468 GRL 470
+L
Sbjct: 170 FQL 172
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 166/308 (53%), Gaps = 5/308 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S+N+++ L + + A + ++++ V P+V TYT ++ G+C + ++ A KVFD
Sbjct: 273 SFNTVVDALCKEGKVTEAHDVVDKMIQRGV-EPNVVTYTALMDGHCLLSEMDEAVKVFDT 331
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN+++YNT+ING+CK +++A EM + P+ +TY+ +I+GLC R
Sbjct: 332 MVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER 391
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ +A L +M N+ T++ +L LC +A+ L+ + +N++PD++ +
Sbjct: 392 LQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 451
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
I+G C+ G+ + A L + ++GL+P V++++ + L G LD A L ++M +
Sbjct: 452 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 511
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C N YNTI G + ++ L+ M+ G + D + + +K ++G +++
Sbjct: 512 CTLNGCIYNTITRGFLRNNETSRAIQ-LLQEMVARGFSADASTMTLFVKMLSDDGLDQSL 570
Query: 457 MQIAHEMV 464
QI E V
Sbjct: 571 KQILREFV 578
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 167/338 (49%), Gaps = 5/338 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI GN AAI Q +++YN+++ L + + A F ++V +
Sbjct: 172 LINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG 231
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ PD+ TY ++I C + ++ + + M + P+++++NT+++ CK+G++ EA
Sbjct: 232 I-SPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 290
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+++M+ RG PN +TY A++ G C+ +DEA + M G NV ++ +++ G
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING 350
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C + + D+A+ + + PD +Y +I+G C + + +AI+L EM A P
Sbjct: 351 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 410
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ ++ + L +N L A+ LLK + + P+ N I G+C A G ++ DL
Sbjct: 411 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRA-GELEAARDLF 469
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G D YS ++ G C G ++ ++ EM
Sbjct: 470 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 507
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 156/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YNSL+ L + K +++V ++P DV ++ T++ CK G + A V
Sbjct: 236 IFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP-DVVSFNTVVDALCKEGKVTEAHDVV 294
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M V+PN++ Y +++G C E++EA K + M+ +GC PN ++YN +I G C
Sbjct: 295 DKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKI 354
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
R+D+A L +M + T+ +++ GLC V + A+ ++ + P++ +Y
Sbjct: 355 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 414
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++++ CK EA++LLK + L P + N + GEL+ A L +
Sbjct: 415 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 474
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ +Y+ +I GLC +G + + L M +G L+ +Y+ + +G+
Sbjct: 475 KGLQPDVWTYSIMINGLC-RRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETS 533
Query: 455 NVMQIAHEMVTK 466
+Q+ EMV +
Sbjct: 534 RAIQLLQEMVAR 545
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 158/310 (50%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM---GMIENAKKV 216
S+N + N+I A F+++++ PP + ++ KM + +
Sbjct: 28 SHNRFHSKSLHFNTIDGAISSFNRMLRMQP-PPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
D + PN+ + +IN FC + A + +++ G +P+ T+ +I G+ + G+
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L KM GF+ +V T+ +++ GLC VG A+ L ++++ N P+V +Y
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ CK + EA +L EM +G+ P +F++N++ L E LL +M
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+P+ VS+NT++ LC +G++ + D+VD+MI+ G + Y+ L+ G+C ++
Sbjct: 267 IMPDVVSFNTVVDALC-KEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325
Query: 457 MQIAHEMVTK 466
+++ MV K
Sbjct: 326 VKVFDTMVCK 335
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 153/303 (50%), Gaps = 5/303 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +L+ + I A F +++ E PDV TY T+I G CK+G A ++
Sbjct: 133 TFTTLIRGIYVEGKIGEALHLFDKMIGEGF-RPDVVTYGTLINGLCKVGNTSAAIRLLGS 191
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN+ AYNT+I+ CK ++ EA +EM+ +G P+ TYN++I+ LC
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
L+ +M + +V + +++ LC GK +A + +++ + P+V +Y
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G C + + DEA+ + M +G P V S+N + + +D+A+ L +M + +
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 371
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+P+ V+Y+T+I GLC + R+QD L M+ + Y LL C+ +
Sbjct: 372 LIPDTVTYSTLIHGLCHVE-RLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA 430
Query: 457 MQI 459
M +
Sbjct: 431 MAL 433
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 189/376 (50%), Gaps = 27/376 (7%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK---------------------NSNK 120
+P + + HT Y + L +H ++S A SL++ +
Sbjct: 1 SPTNSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQ 60
Query: 121 LSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
SD ++ S LI AY + G ++ AI + ++ + L + +L L+++ KL
Sbjct: 61 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWG 120
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + +++ +CK G I A+ V + +T ++P+++++NT+ING+
Sbjct: 121 FYKEIL-ECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGY 179
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ G+L+E + + M G +P+ TY+ +I GLC ++D+A L +M G N
Sbjct: 180 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNG 239
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G+ D A+ + ++ +++PD+ +Y +I G CK G+ +A L+ E
Sbjct: 240 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDE 299
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M GLKP ++ + + G+++ A K+M Q + + V Y +I GLC +G
Sbjct: 300 MSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLC-QEG 358
Query: 417 RMQDVEDLVDRMIRSG 432
R D E ++ M+ G
Sbjct: 359 RSVDAEKMLREMLSVG 374
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 136/245 (55%), Gaps = 6/245 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L++ + G+++ A + + + S+N+L+ +R+ L E F
Sbjct: 135 YFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGD--LDEGFRLK 192
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+ + V PDV TY+ +I G CK +++A ++FD M K PN + + T+I+G CK
Sbjct: 193 SAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKN 252
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + +M+++ P+ +TYN +IYGLC G + +A L+ +M + G K + T+
Sbjct: 253 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITY 312
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G + A + + +++ N+ D Y +I+G C+ G+S +A +L+EM +
Sbjct: 313 TTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLS 372
Query: 360 RGLKP 364
GLKP
Sbjct: 373 VGLKP 377
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 184/367 (50%), Gaps = 15/367 (4%)
Query: 107 LISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE-NGACLYSY 161
L+ +A+LL ++ ++ + +KL+ + RG V + F + Q ++S+
Sbjct: 198 LLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSF 257
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
N ++ + RV ++ A E ++ E PD T+ ++ G C+ + +V +
Sbjct: 258 NVVIKGVCRVGQVQKALELVERM-NEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQ 316
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
PN++ + ++I+G+CK G+LE+A N+M+ G PN +TYN +I G G +
Sbjct: 317 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDL 376
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A + +M +V T S++ G C G+ D A+ ++ + + P+V ++ ++
Sbjct: 377 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 436
Query: 338 INGFCKIGKSDEAISLLKEMRAR-GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
I+ CK +SDEAI LL E+ R + P F +N V +L + G++D A L+ K M +
Sbjct: 437 IHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 496
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG---NV 453
C P+ +Y +I G CM K R+ + M+ +G + D +C + + G V
Sbjct: 497 CRPDKYTYTILIIGYCM-KSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEV 555
Query: 454 ENVMQIA 460
++VM++A
Sbjct: 556 DHVMRLA 562
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 155/311 (49%), Gaps = 6/311 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN L+ L+ + F + +++ V PDV ++ +I+G C++G ++ A ++ +
Sbjct: 219 YAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVE 278
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLCIN 274
M P+ + +N +++G C+ E+ + + + G C PN +T+ ++I G C
Sbjct: 279 RMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKA 338
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++++A + M +G N T+ ++ G VG AV + + PDV ++
Sbjct: 339 GKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTF 398
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP- 393
+I+G+C+ G+ D+A+ + +M ++P V++F+ + L + D AI LL ++
Sbjct: 399 SSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNL 458
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ D P YN +I LC G++ + + M G D Y+ L+ GYC + +
Sbjct: 459 RPDIAPQAFIYNPVIDVLCKC-GKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRI 517
Query: 454 ENVMQIAHEMV 464
+ HEMV
Sbjct: 518 SEAIMFFHEMV 528
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 162/311 (52%), Gaps = 11/311 (3%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN++L L + AE ++V+ N PP+ T+ T IR +C+ G+++ A ++ D
Sbjct: 213 YTYNTVLMGLCGARQWEDAEALMAEMVR-NHCPPNEVTFATQIRAFCQNGLLDRAVQLLD 271
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M P+++ Y+T++NGF ++G +++A + +N M+ C+PN + YNA + GLCI
Sbjct: 272 RMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQ 328
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R ++ L+ +M N +T + LC G D A+ L + + PD Y
Sbjct: 329 RWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYN 388
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I F + G+ D+A+ LL M P V SFNA + L D A L+ QM +
Sbjct: 389 TLIYSFSEQGRVDDALKLLNSMPC---SPDVISFNAALKGLCRAERWDDAEELIVQMLRE 445
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
DC +++N +I LC GR+ + ++ ++M + G D YS L+ G E+G VE+
Sbjct: 446 DCPLIEMTFNILIDSLCQ-NGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVES 504
Query: 456 VMQIAHEMVTK 466
+++ M K
Sbjct: 505 AIELFQSMPCK 515
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 158/336 (47%), Gaps = 38/336 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S+N+L+ R + AE +V TYTT+I GYC+ G + +A +
Sbjct: 148 SHNTLVAGYCRDGRLADAERLLAAAGLSGAA--NVVTYTTLINGYCRSGRLADALALIAS 205
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M V P+ YNT++ G C + E+A+ M EM+ C PNE+T+ I C NG +D
Sbjct: 206 MPVAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDR 265
Query: 280 AKMLMAKMR--------------LNGF------------------KDNVSTHKSMLKGLC 307
A L+ +M +NGF K N + + LKGLC
Sbjct: 266 AVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGMLCKPNTICYNAALKGLC 325
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
+ +++ + ++ + P+ ++ ++ + C+ G D A+ +L++M G +P
Sbjct: 326 IAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAV 385
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+N + E G +D A+ LL MP C P+ +S+N + GLC A+ R D E+L+ +
Sbjct: 386 IYNTLIYSFSEQGRVDDALKLLNSMP---CSPDVISFNAALKGLCRAE-RWDDAEELIVQ 441
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M+R L ++ L+ C+ G V N +++ +M
Sbjct: 442 MLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQM 477
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 151/308 (49%), Gaps = 8/308 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+++ L L + + A E Q+ K P D Y T+I + + G +++A K+ +
Sbjct: 351 TFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRP-DAVIYNTLIYSFSEQGRVDDALKLLNS 409
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M P+++++N + G C+ ++A++ + +M+ C E+T+N +I LC NGRV+
Sbjct: 410 MPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNN 469
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A + +M G ++ T+ S++ GL G + A+ +++ PD+ Y V+
Sbjct: 470 AIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLK 526
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G C+ + ++A L+ M + P +FN + L + G +DRAI + +QMP+ P
Sbjct: 527 GLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTP 586
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ +YN +I G +GR+ D L+ M D Y+ LKG C + ++
Sbjct: 587 DIFTYNALINGF-SEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEV 642
Query: 460 AHEMVTKK 467
EM+ K
Sbjct: 643 VAEMLRMK 650
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 112/221 (50%), Gaps = 4/221 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ L + + A E F Q+ K P D+ TY+++I G + G++E+A ++F
Sbjct: 453 TFNILIDSLCQNGRVNNAIEVFEQMPKYGCTP-DIVTYSSLINGLSEQGLVESAIELFQS 511
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M KP++ YN ++ G C+ E+A + ++ M + C PNE+T+N +I LC G VD
Sbjct: 512 MPCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDR 571
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A + +M G ++ T+ +++ G G+ D A L + + PD SY +
Sbjct: 572 AIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALK 628
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
G C+ + EA ++ EM P +F R+ V NG
Sbjct: 629 GLCRAERWKEAEEVVAEMLRMKCPPNEVTFKYANRLFVPNG 669
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 156/320 (48%), Gaps = 23/320 (7%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLS---DFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
++ +T L + L+ A +L+ +K D I + LI ++ ++G V A+ K
Sbjct: 352 FSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDAL------K 405
Query: 151 QIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ + C + S+N+ L L R AEE Q+++E+ P T+ +I C+
Sbjct: 406 LLNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDC-PLIEMTFNILIDSLCQN 464
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G + NA +VF+ M P+++ Y+++ING ++G +E A + M C+P+ Y
Sbjct: 465 GRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGY 521
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
NA++ GLC R ++A L++ M N T ++ LC G D+A+ + +
Sbjct: 522 NAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPK 581
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
PD+ +Y +INGF + G+ D+A LL M KP S+N+ + L
Sbjct: 582 YGSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKE 638
Query: 385 AILLLKQMPQMDCLPNFVSY 404
A ++ +M +M C PN V++
Sbjct: 639 AEEVVAEMLRMKCPPNEVTF 658
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 10/266 (3%)
Query: 200 MIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+I+ C + +A++V D + + +++NT++ G+C+ G L +A++ +
Sbjct: 118 LIKKLCAQRRLADAERVLDALKAAGAADPVSHNTLVAGYCRDGRLADAER-LLAAAGLSG 176
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
N +TY +I G C +GR+ +A L+A M + + T+ ++L GLC +++ A
Sbjct: 177 AANVVTYTTLINGYCRSGRLADALALIASMPV---APDTYTYNTVLMGLCGARQWEDAEA 233
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
+ ++ + P+ ++ I FC+ G D A+ LL M G P V ++ +
Sbjct: 234 LMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFS 293
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
E G +D AI LL M C PN + YN + GLC+A+ R +DV L+ M+R +
Sbjct: 294 EQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQ-RWEDVGQLIVEMVRKDCLPNE 349
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
+S L C+ G V+ M++ +M
Sbjct: 350 ATFSMLTSCLCQNGLVDCAMEVLEQM 375
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 104/202 (51%), Gaps = 6/202 (2%)
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I LC R+ +A+ ++ ++ G D VS H +++ G C G+ A L
Sbjct: 116 NILIKKLCAQRRLADAERVLDALKAAGAADPVS-HNTLVAGYCRDGRLADA-ERLLAAAG 173
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ +V +Y +ING+C+ G+ +A++L+ M + P +++N V L + +
Sbjct: 174 LSGAANVVTYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGARQWED 230
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A L+ +M + C PN V++ T I C G + L+DRM + G D +YS L+
Sbjct: 231 AEALMAEMVRNHCPPNEVTFATQIRAFCQ-NGLLDRAVQLLDRMPQYGCTPDVVIYSTLV 289
Query: 445 KGYCEEGNVENVMQIAHEMVTK 466
G+ E+G V++ +++ + M+ K
Sbjct: 290 NGFSEQGRVDDAIELLNGMLCK 311
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 182/376 (48%), Gaps = 40/376 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + GNV+ A+ + + + S LLG L + + +A + F ++ + N
Sbjct: 392 LICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEM-EAN 450
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPN-------------------- 225
+ PD+ TY+T+I G CK G ++ A +++ M + PN
Sbjct: 451 GLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQA 510
Query: 226 ---------------LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
++ YN MI+G+ K+G EA K ++ +G P +T+N+++YG
Sbjct: 511 RMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYG 570
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
CIN ++ +A+ L+ ++L+G + N T+ +++ C G + L + + P
Sbjct: 571 FCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPT 630
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+Y VVI G CK K E+ LL++M A GL P S+N + + + ++ +A L
Sbjct: 631 HITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYD 690
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M + P V+YN +I G C+ G ++D ++L+ + NL+ Y+ ++K +C +
Sbjct: 691 KMLLHNLEPTSVTYNILINGFCVY-GDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAK 749
Query: 451 GNVENVMQIAHEMVTK 466
G+V+ + +MV K
Sbjct: 750 GDVDKAVVYFRQMVEK 765
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 186/414 (44%), Gaps = 73/414 (17%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
S++ S ++ + + A+ +F + E + S+N+++ ++ + +A+ FF
Sbjct: 245 SEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFF 304
Query: 182 HQIVKENVVP----------------------------------PDVSTYTTMIRGYCKM 207
++K ++P PD+ TY + +G+ +
Sbjct: 305 CMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLL 364
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-------- 256
G+I A + M +K PNL+ Y +I G C+ G +EEA K EM++ G
Sbjct: 365 GLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISS 424
Query: 257 ---------------------------CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
RP+ +TY+ +I+GLC G V +A +L KM
Sbjct: 425 TVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCS 484
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
N N H ++L GLC GK QA Y ++ +N++ D+ Y ++I+G+ K G + E
Sbjct: 485 NRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTRE 544
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A+ L K++ +G+ PT+ +FN++ N +L +A LL + PN V+Y T++
Sbjct: 545 AVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMN 604
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
C +G MQ + +L+ M Y+ ++KG C++ ++ Q+ +M
Sbjct: 605 VYC-EEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDM 657
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 181/373 (48%), Gaps = 43/373 (11%)
Query: 132 AYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP 191
AY V A+F + K + + +YNSLL L N + + +++I K + P
Sbjct: 188 AYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSN---IMWDVYNEI-KVSGTP 243
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
T + ++ G C+ ++A F + +P+++++NT+++ +CK G ++ AK
Sbjct: 244 QSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSF 303
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M+ G P+ +YN +I+GLCI G + EA L M +G + ++ T+ + KG +
Sbjct: 304 FCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRL 363
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK------------- 355
+G + A ++ ++ NP++ +Y V+I G C+IG +EA+ L K
Sbjct: 364 LGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIIS 423
Query: 356 ----------------------EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
EM A GL+P + +++ + L + GE+ +AILL ++M
Sbjct: 424 STVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMC 483
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+PN + + I+ GLC KG++ D +I S +LD +Y+ ++ GY + GN
Sbjct: 484 SNRIIPNSLIHGAILMGLC-EKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNT 542
Query: 454 ENVMQIAHEMVTK 466
+++ ++ K
Sbjct: 543 REAVKLYKQLGEK 555
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 155/345 (44%), Gaps = 41/345 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I Y RGN + A+ + Q + E
Sbjct: 532 MIDGYIKRGNTREAVKLYKQ------------------------------------LGEK 555
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P + T+ +++ G+C + A+++ D + ++PN + Y T++N +C++G ++
Sbjct: 556 GISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSL 615
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++EM + P +TY +I GLC ++ E+ L+ M G + ++ ++++
Sbjct: 616 LELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQA 675
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C +A ++ N+ P +Y ++INGFC G +A +LL ++ R +
Sbjct: 676 FCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLN 735
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+++ + + G++D+A++ +QM + + Y+ +I LC + + + +
Sbjct: 736 KYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLC-KRCLVTEAKYFF 794
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
M+ G D ++ LL + + G++ + ++ EM+ K G L
Sbjct: 795 CMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMI-KSGWL 838
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 178/333 (53%), Gaps = 9/333 (2%)
Query: 136 RGNVKAAIFWFHQAKQ--IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
RG++ A+ + +Q IE G +Y N+++ L ++ A F ++ + + P+
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIY--NTIIDALCNYKNVNDALNLFTEMDNKGI-RPN 290
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
V TY ++IR C G +A ++ M + PN++ ++ +I+ F K+G+L EA+K +
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
EM+ R P+ TY+++I G C++ R+DEAK + M NV T+ +++KG C
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ D+ + R + + + + +Y +I+GF + + D A + K+M + G+ P + +++
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ L NG+++ A+++ + + + P+ +YN +I G+C A G+++D DL +
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA-GKVEDGWDLFCSLSL 529
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + Y+ ++ G+C +G E + EM
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 169/342 (49%), Gaps = 5/342 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + R + A+ + ++ + + NSLL N I A Q+V
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV- 178
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E PD T+ T+I G + A + D M VK P+L+ Y ++NG CK+G+++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + +M P + YN +I LC V++A L +M G + NV T+ S++
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+ LC G++ A L +++E +NP+V ++ +I+ F K GK EA L EM R +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +F+++++ + LD A + + M DC PN V+YNT+I G C AK R+ + +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK-RVDEGME 417
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
L M + G + Y+ L+ G+ + +N + +MV+
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 139/252 (55%), Gaps = 4/252 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ V+ + AE+ + +++K ++ PD+ TY+++I G+C ++ AK +F++
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ YNT+I GFCK ++E + EM RG N +TY +I+G
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+++ +M +G ++ T+ +L GLC GK + A+ + + M PD+ +Y +
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK GK ++ L + +G+KP V ++ + G + A L ++M +
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 397 CLPNFVSYNTII 408
LP+ +YNT+I
Sbjct: 567 PLPDSGTYNTLI 578
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 185/386 (47%), Gaps = 28/386 (7%)
Query: 85 PNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIF 144
P + H + + V + ISI N+L+D + + +GD VK+ F
Sbjct: 29 PPSFSHCSFWVRDFSGVRYDYRKISI--------NRLNDLKLDDAVNLFGDM--VKSRPF 78
Query: 145 WFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRG 203
+ ++ LL + ++N L Q+ +N+ + ++ TY+ +I
Sbjct: 79 -----------PSIVEFSKLLSAIAKMNKFDLVISLGEQM--QNLGISHNLYTYSILINC 125
Query: 204 YCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
+C+ + A V M +P+++ N+++NGFC + +A + +M+ G +P+
Sbjct: 126 FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD 185
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
T+N +I+GL + R EA L+ +M + G + ++ T+ ++ GLC G D A+ L+
Sbjct: 186 SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLK 245
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ + + P V Y +I+ C ++A++L EM +G++P V ++N++ R L G
Sbjct: 246 KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
A LL M + PN V+++ +I + +G++ + E L D MI+ + D Y
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAF-VKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTK 466
S L+ G+C ++ + M++K
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISK 390
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 5/231 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + + E F ++ + +V V TYTT+I G+ + +NA+ VF
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV-TYTTLIHGFFQARECDNAQIVFKQ 456
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+++ Y+ +++G C G++E A + P+ TYN MI G+C G+
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L + L G K NV T+ +M+ G C G ++A R + E PD +Y
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L++EMR+ + V +L +G LD++ L
Sbjct: 577 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML-HDGRLDKSFL 626
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 160/347 (46%), Gaps = 40/347 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++N+ L +L R N ++ A E FH + + PDV +YT +I C + A KV+
Sbjct: 119 IWAFNTYLNLLCRQNRLETALELFHSMPSKGR-DPDVVSYTIIIDALCNAKRFDEAAKVW 177
Query: 218 DVMT--------------------------------------VKPNLLAYNTMINGFCKK 239
+ VK N L YN +I+GFC+
Sbjct: 178 RRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRM 237
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G +++A K M GC P+ +TYN ++ C G VDEA L+ M +G + ++ ++
Sbjct: 238 GRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSY 297
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+LKG C D+A + M+ DV SY VI FCK ++ + L +EM
Sbjct: 298 NELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCG 357
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G++P + +FN + + G LL +M +M LP+ + Y ++ LC G++
Sbjct: 358 KGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLC-KNGKVD 416
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M+ +G N D Y+ LL G+C+ V + M + EM +K
Sbjct: 417 VAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSK 463
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 184/404 (45%), Gaps = 56/404 (13%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
ISKL+KA G + AI+ F Q + YN +GVL+R + + LA ++
Sbjct: 17 ISKLVKA----GLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYY---- 68
Query: 186 KENVVPPDVS----TYTTMIRGYCK------MGMIENAKKVFDVMTVKPNLLAYNTMING 235
+ +V+P S TY+ I C + +I + D + P++ A+NT +N
Sbjct: 69 RRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNL 128
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
C++ LE A + + M ++G P+ ++Y +I LC R DEA + ++ G +
Sbjct: 129 LCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPD 188
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK--------- 346
+++ GLC G+ D A + V++ + + Y +I+GFC++G+
Sbjct: 189 YKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKA 248
Query: 347 --------------------------SDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
DEA+ L++ M G++P ++S+N + + +
Sbjct: 249 FMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKAN 308
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+DRA L++ + Q + + VSYNT+I C A+ R + +L + M G D +
Sbjct: 309 MVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKAR-RTRKGYELFEEMCGKGIRPDMVTF 367
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
+ L+ + EG+ V ++ EM K R+L F T VVD L
Sbjct: 368 NILIDAFLREGSTHVVKKLLDEMT--KMRVLPDCIFYTAVVDHL 409
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 136/286 (47%), Gaps = 4/286 (1%)
Query: 110 IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV 169
+ ++K K++ + LI + G V A+ + L +YN LL
Sbjct: 211 LVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCC 270
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK-KVFDVMTVKP--NL 226
+ A + ++ + V PD+ +Y +++G+CK M++ A + + M K ++
Sbjct: 271 EEGMVDEAVRLV-ETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDV 329
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
++YNT+I FCK + + EM +G RP+ +T+N +I G K L+ +
Sbjct: 330 VSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDE 389
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M + + +++ LC GK D A R+++E +NPDV SY ++NGFCK +
Sbjct: 390 MTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSR 449
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+A+ L EM+++GL P ++ + L+ ++ A + QM
Sbjct: 450 VMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQM 495
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 5/279 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ R+ + A + + + VP D+ TY ++ C+ GM++ A ++ + M
Sbjct: 227 YNALIDGFCRMGRVDKAMKIKAFMSRTGCVP-DLVTYNILLNYCCEEGMVDEAVRLVETM 285
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V+P+L +YN ++ GFCK ++ A M E M + ++YN +I C R
Sbjct: 286 ERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRT 345
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+ L +M G + ++ T ++ G L + + + PD Y V
Sbjct: 346 RKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAV 405
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++ CK GK D A S+ ++M G+ P V S+NA+ + + A+ L +M
Sbjct: 406 VDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGL 465
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
P+ V+Y I+ GL K ++ + D+M+ G L+
Sbjct: 466 YPDEVTYKLIVGGLIRGK-KISLACRVWDQMMERGFTLN 503
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 4/217 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
++L+K + V A + Q + + SYN+++ + + E F ++
Sbjct: 298 NELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCG 357
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ + PD+ T+ +I + + G KK+ D MT V P+ + Y +++ CK G+++
Sbjct: 358 KGI-RPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVD 416
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A +M+ G P+ ++YNA++ G C RV +A L +M+ G + T+K ++
Sbjct: 417 VAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIV 476
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
GL K A +ME + E ++N
Sbjct: 477 GGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNA 513
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 80/152 (52%), Gaps = 4/152 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N L+ +R S + ++ ++ K V+P D YT ++ CK G ++ A VF
Sbjct: 364 MVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLP-DCIFYTAVVDHLCKNGKVDVAHSVF 422
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V P++++YN ++NGFCK + +A +EM ++G P+E+TY ++ GL
Sbjct: 423 RDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRG 482
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
++ A + +M GF N ++++ +
Sbjct: 483 KKISLACRVWDQMMERGFTLNRHLSETLVNAI 514
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 153/308 (49%), Gaps = 7/308 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK----K 215
+Y +L+ R+ +++A H +++ VP + + + MI K ++E A K
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANC-SFMIDELRKKELVEEAFSLACK 328
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ D+ V PN+ AYN +I+ CK ++A + EM RG PNE+TY +I+ LC G
Sbjct: 329 LGDLGMV-PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+++A L KMR G K V + S++ G C G D+A G L +++ + P SY
Sbjct: 388 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 447
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I G C+ G + L +EM RG+ ++F A+ ++ ++D A L +M
Sbjct: 448 PLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 507
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ +PN V++N +I G C+ G ++ L D+M+ G D Y L+ G C V
Sbjct: 508 NVIPNEVTFNVMIEGYCLV-GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566
Query: 456 VMQIAHEM 463
+ ++
Sbjct: 567 ANEFVADL 574
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 161/330 (48%), Gaps = 7/330 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN+L+ L + A+ F ++ + P +V TY +I CK GMIE+A +F
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV-TYAILIHALCKRGMIEDALCLF 396
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +K + YN++ING+CK+G L+ A+ ++ M+ G P +Y+ +I GLC N
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + L +M G N T +++ G C K D+A ++++N+ P+ ++
Sbjct: 457 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+I G+C +G +A L +M GLKP +++ ++ L + +A + +
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ N S ++ G +GR + L D M G LD ++ ++ ++ + E
Sbjct: 577 SYAVLNNFSLTALLYGF-FREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
+ EM K+ + F T ++DAL
Sbjct: 636 KSCVLFREM--KEQGVKPDDIFYTCMIDAL 663
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 170/340 (50%), Gaps = 5/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A RG ++ A+ F + + +Y YNSL+ + S+ A +VKE
Sbjct: 379 LIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG 438
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P ++Y+ +I G C+ G + + ++ M + N + +INGFCK +++EA
Sbjct: 439 LTP-TAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++M++ PNE+T+N MI G C+ G + +A L +M G K + T++S++ G
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC+ +A ++ ++ + + S ++ GF + G+ E L EM RG+K
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 617
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ SF + ++ + +++ +L ++M + P+ + Y +I L + +Q + +
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL-NCW 676
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
D+M+ G++ + ++ L+ C+ G + + + EM+
Sbjct: 677 DQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 158/344 (45%), Gaps = 40/344 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+ + +L LV++ LA + F ++++ V D YT IR YC+ ++ A+ +
Sbjct: 164 YTASQILFSLVKIRQFALARDLFDKMLQSGV-HLDEYVYTAGIRAYCESRNLDGARGLVV 222
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC--- 272
M VK + + YN ++ G CK ++EA + N M+N G +E+TY ++YG C
Sbjct: 223 RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME 282
Query: 273 --------------------------------INGRVDEAKMLMAKMRLNGFKDNVSTHK 300
V+EA L K+ G NV +
Sbjct: 283 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ LC +FD A + + + P+ +Y ++I+ CK G ++A+ L +MR +
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+K TV+ +N++ + G LDRA LL M + P SY+ +I GLC G +
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR-NGDLSS 461
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+L M G + ++ L+ G+C++ ++ ++ +M+
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGE 241
+KE V PD YT MI K + A +D M V PN + + +IN CK G
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L A+ EM+ PN+ TYN + G +++AK L + M L G ++ +
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNI 762
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++KGLC GK +A+ + + E+ +PD SY +I+ CK+G ++A L EM +G
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA------- 414
LKP V ++N R +GE D+A+ + M + PN+ +Y ++ G+ +
Sbjct: 823 LKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFSC 882
Query: 415 -KGRMQDVEDLVDRMIRSGHN 434
+G Q ++ V ++ S HN
Sbjct: 883 FRGTKQYIQISVYELMDSTHN 903
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 157/346 (45%), Gaps = 41/346 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++ +L+ + + A F +++ NV+P +V T+ MI GYC +G I A +++D
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYD 537
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M +KP+ Y ++I+G C + +A + + ++ N N + A++YG G
Sbjct: 538 QMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREG 597
Query: 276 RVDEAKMLMAKMRLNGFKDNVST-----------------------------------HK 300
R E L +M + G K ++ + +
Sbjct: 598 RFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYT 657
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
M+ L QA+ ++ +P+ ++ V+IN CK G A L KEM A
Sbjct: 658 CMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAG 717
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+ P F++N G++++A L M Q L + VS+N +I GLC A G++Q+
Sbjct: 718 NVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGH-LASIVSFNILIKGLCKA-GKIQE 775
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
DL+ ++ SG + D YS ++ C+ G++ ++ +EM+ K
Sbjct: 776 AIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+G N T +L L + +F A ++++ ++ D Y I +C+ D
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A L+ M + G+K + +N + L +N + A+ + M + + V+Y T++
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276
Query: 410 GLCMAKGRMQDVE---DLVDRMIRSG 432
G C RM+++E + MIR G
Sbjct: 277 GFC----RMEELEMALRITHDMIRLG 298
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 176/382 (46%), Gaps = 50/382 (13%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFH 182
F+S L + + G + AA +A Q G C+ Y+YN L+ + ++ A F
Sbjct: 159 FLSFLAGSCANAGFLDAAAALLSKAPQF--GCCVEAYAYNKLMNSFIGCGRVQDAVALFE 216
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------------- 221
++ PDV ++ I+G C++G ++ A ++ + M
Sbjct: 217 GWIQGGAYSPDVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRV 276
Query: 222 ------------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
PN++ Y ++I+G+CK G +E+A N+M+ G PN +T
Sbjct: 277 KEVSRGREVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVT 336
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
YN +I G G + A + +M L +V T +++ G C G+ D A+ +
Sbjct: 337 YNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMS 396
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR-GLKPTVFSFNAVFRILVENGEL 382
+ + P+ ++ ++I FCK +S EA+ LKE+ R + P F N V +L + G++
Sbjct: 397 QYQIQPNAHTFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKV 456
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF----T 438
D A L+L +M C P+ +Y +I G CM KGR+ + ++M+ +G + D +
Sbjct: 457 DEANLILMEMEGKGCRPDKYTYTILIIGHCM-KGRISEAITFFNKMVDTGCSPDSITVNS 515
Query: 439 MYSCLLKGYCEEGNVENVMQIA 460
CLLK V+ +M+IA
Sbjct: 516 FIGCLLKAG-MPSEVDRIMKIA 536
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 121/252 (48%), Gaps = 6/252 (2%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN-GRVD 278
+ + P+ +Y +I+ C+ +A K ++M ++ + + + G C N G +D
Sbjct: 115 LAIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLD 174
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM-NPDVKSYEVV 337
A L++K G + ++ G+ AV ++ +PDV S+ V
Sbjct: 175 AAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVA 234
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD- 396
I G C++G +A+ L++ M G P + N + L E+ R +L+++ Q D
Sbjct: 235 IKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRL-QRDG 293
Query: 397 -CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C+PN V+Y ++I G C + GRM+D + + MI G + Y+ L+ GY + GN+ +
Sbjct: 294 VCMPNVVTYTSVISGYCKS-GRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGS 352
Query: 456 VMQIAHEMVTKK 467
+ + +M+ ++
Sbjct: 353 AVAVYQQMILRR 364
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 7/281 (2%)
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMINGFCKKGELEE 244
+PP +Y +I C+ +A K+FD MT + PN + + G L+
Sbjct: 116 AIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLDA 175
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSML 303
A +++ GC YN ++ GRV +A L G + +V + +
Sbjct: 176 AAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAI 235
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL- 362
KG+C VG +A+ + + E +PD + +++ G C++ + +L+ ++ G+
Sbjct: 236 KGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVC 295
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P V ++ +V ++G ++ A+ + M PN V+YN +I G A G M
Sbjct: 296 MPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKA-GNMGSAV 354
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ +MI D +S L+ GYC G +++ M+ EM
Sbjct: 355 AVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEM 395
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 157/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y +L+ + ++ +++ P D YT+ + GYC+ G++ +A ++F
Sbjct: 72 LRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAP-DSHAYTSFVVGYCRAGLLAHACRLF 130
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+M ++ Y +++G C G + EA M GC P+ Y M++GLC
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR EA+ L++ GF+ NV + +++ G C VG + AV + +P+V++Y
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+GFCK K D A+ L M GL P V ++ A+ + +G+LD A LL+ M
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMEN 310
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+PN + + +I LC + R+ + + L+ +I+ G ++ +Y+ L+ G C+ G
Sbjct: 311 SGLVPNEWTCSVLIDALCKHE-RVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFA 369
Query: 455 NVMQIAHEMVTK 466
++ +V++
Sbjct: 370 AADRLMQTLVSQ 381
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 158/344 (45%), Gaps = 40/344 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF- 217
++Y +LL L ++ A F + + P D Y TM+ G C G A+ +
Sbjct: 143 FTYTALLHGLCGAGMVREAMSVFAGMQADGCAP-DPHVYATMVHGLCGAGRTREAETLLS 201
Query: 218 DVMT--VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
D M +PN++ YN +I+G+C G+LE A M GC PN TY +I G C +
Sbjct: 202 DAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSR 261
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD----- 330
++D A ML ++M G NV T+ ++++G C G+ D A L+++ + + P+
Sbjct: 262 KLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCS 321
Query: 331 --------------------------VKSYEVV----INGFCKIGKSDEAISLLKEMRAR 360
+K E+V I+G CK G+ A L++ + ++
Sbjct: 322 VLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQ 381
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G P +++++ L EL A+L+L M + P+ V+Y II L G
Sbjct: 382 GFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVG-ADG 440
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ ++D+MI +G D Y+ ++ YC EG +E+ + MV
Sbjct: 441 SKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMV 484
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 39/288 (13%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ V ++LA + F ++ N P+V TYT +I G+CK ++ A +F M
Sbjct: 215 YNALIDGYCNVGDLELAVDVFERM-DVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRM 273
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ PN++ Y +I G C G+L+ A + + M N G PNE T + +I LC + RV
Sbjct: 274 VDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERV 333
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA++L+ + G K N + S++ GLC G+F A ++ ++ PD +Y +
Sbjct: 334 GEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSL 393
Query: 338 INGFCKIGKSDEAI-----------------------------------SLLKEMRARGL 362
I+G C+ + EA+ +L +M A G+
Sbjct: 394 IDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGI 453
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
KP VF++ R G ++ A ++ M PN V+YN +ICG
Sbjct: 454 KPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICG 501
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
NL Y T+IN +C G+L +K+ ++ ++ G P+ Y + + G C G + A L
Sbjct: 71 NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M L G T+ ++L GLC G +A+ + PD Y +++G C
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G++ EA +LL + A G +P V +NA+ G+L+ A+ + ++M C PN +Y
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I G C ++ ++ L RM+ +G + Y+ L++G C +G ++ ++ M
Sbjct: 251 TELISGFCKSR-KLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSM 308
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 163/363 (44%), Gaps = 56/363 (15%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++ + L+ L + + A+ ++++ + ++ YT++I G CK G A ++
Sbjct: 318 WTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEI-VYTSLIDGLCKAGRFAAADRLMQ 376
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ + P+ Y+++I+G C++ EL EA +++MM +G +P+ +TY +I L
Sbjct: 377 TLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREV 436
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
D +K ++ KM G K +V T+ ++ C G+ + A + ++++ + P++ +Y
Sbjct: 437 GADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYN 496
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN---------------- 379
+I G+ +G + +A S K M A G KP S+ + R+L++
Sbjct: 497 ALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKI 556
Query: 380 -----------------------------------GELDRAILLLKQMPQMDCLPNFVSY 404
LD A +LL +M + P+ Y
Sbjct: 557 AEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVY 616
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+II C K + + VD M++SG+ Y ++ CEEG+++ Q+ +M+
Sbjct: 617 TSIIACCCRLK-MLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDML 675
Query: 465 TKK 467
+K+
Sbjct: 676 SKE 678
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 129/319 (40%), Gaps = 62/319 (19%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y ++ LVR +++ +++ + PDV TYT +R YC G +E+A+ +
Sbjct: 424 TYTIIIDELVREVGADGSKKILDKMIAAGI-KPDVFTYTIFVRSYCHEGRMEDAEHMMLH 482
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY------------ 264
M V PNL+ YN +I G+ G +A M+ GC+PNE +Y
Sbjct: 483 MVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKES 542
Query: 265 ---------------------------------------NAMIYGLCINGRVDEAKMLMA 285
N + LC R+DEAK+L+
Sbjct: 543 SNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLI 602
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M+ + + S++ C + +A+ ++ +++++ P ++SY +I+ C+ G
Sbjct: 603 EMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEG 662
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
A + +M ++ ++ + L++ G + LL M + + P+ Y
Sbjct: 663 SIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYA 722
Query: 406 TIICGLCMAKGRMQDVEDL 424
+ G++ D D+
Sbjct: 723 RL-------TGKITDANDI 734
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 109/263 (41%), Gaps = 24/263 (9%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFF 181
F + +++Y G ++ A +++G C L +YN+L+ + A F
Sbjct: 458 FTYTIFVRSYCHEGRMEDAEHMMLH--MVDHGVCPNLVTYNALICGYANLGLTSQAFSTF 515
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKM----GMIENAKKVFDVMTVK-------------- 223
+V N P+ +YT ++R K + N+ ++ + +K
Sbjct: 516 KHMVA-NGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQL 574
Query: 224 -PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+ YN + C+ L+EAK + EM + P+E Y ++I C + EA
Sbjct: 575 PSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALT 634
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
+ M +G+ + +++ ++ LC G A +++ N + ++ ++I+G
Sbjct: 635 FVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLL 694
Query: 343 KIGKSDEAISLLKEMRARGLKPT 365
+ G E SLL M + +P+
Sbjct: 695 QKGYVAECSSLLSVMEEKNYRPS 717
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 161/317 (50%), Gaps = 5/317 (1%)
Query: 153 ENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIEN 212
E +Y+YN L+ R L F ++++ + PDV +Y +I G+ K G ++
Sbjct: 184 EAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGL-GPDVFSYNALIDGFSKEGEVDK 242
Query: 213 AKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
A +F M + PN++ Y+++ING CK E+++A++ + +M+ G RPN +TYN +I+
Sbjct: 243 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIH 302
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G +G E+ + +M + +V S + LC G+ +A +++ P
Sbjct: 303 GYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP 362
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
DV SY +++G+ G +L M G+ P FN + G +D+++L+
Sbjct: 363 DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMF 422
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+ M + P+ ++++T+I C GR+ D + + MI +G D +YSCL++G C
Sbjct: 423 EDMTKQGVNPDIITFSTVISAFCRL-GRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 481
Query: 450 EGNVENVMQIAHEMVTK 466
++ ++ +M++K
Sbjct: 482 RRDLVKAKELISDMLSK 498
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 181/374 (48%), Gaps = 24/374 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY G + ++ F + + ++++++ R+ + A E F+ ++ +
Sbjct: 405 LINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI-DT 463
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMINGFCKKGELEE 244
VPPD + Y+ +I+G C + AK++ M K P + + ++IN CK+G + E
Sbjct: 464 GVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAE 523
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
K ++ +++ G RPN +T+N+++ G C+ G + EA L+ M G + ++ T+ +++
Sbjct: 524 GKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVD 583
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C G+ D A+ R+++ + SY ++++G + ++ A + EM G+
Sbjct: 584 GYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAV 643
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++ ++ V L N D A +LL+++ M+ + +++N +I + GR Q+ ++L
Sbjct: 644 SIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM-FKVGRRQEAKEL 702
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV---------------MQIAHE---MVTK 466
+ G Y ++ +E + E+ +I +E M+
Sbjct: 703 FAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLN 762
Query: 467 KGRLLKLKNFLTRV 480
KG + K N+L+++
Sbjct: 763 KGEVAKAGNYLSKI 776
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 150/309 (48%), Gaps = 5/309 (1%)
Query: 157 CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
C+ + S++ L + + ++ I+ P ++ T+ +++ GYC +G ++ A +
Sbjct: 504 CIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRP-NLITFNSLVDGYCLVGNMKEAVGL 562
Query: 217 FDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
D M V+P++ YNT+++G+CK G +++A +M+++ ++YN +++GL
Sbjct: 563 LDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQ 622
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
R AK + +M +G ++ T+ ++L GLC D+A L + N+ D+ +
Sbjct: 623 ARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILT 682
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+ +VI K+G+ EA L + GL PT+ ++ + L++ + A L M
Sbjct: 683 FNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 742
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ C P+ N II + + KG + + + ++ + G + T S L+ + G
Sbjct: 743 KSSCTPDSRILNEII-RMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKY 801
Query: 454 ENVMQIAHE 462
+++ E
Sbjct: 802 REYIKLLPE 810
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 39/283 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y GN+K A+ + + +Y+YN
Sbjct: 546 LVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYN-------------------------- 579
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEEA 245
T++ GYCK G I++A +F M K L +YN +++G + A
Sbjct: 580 ----------TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVA 629
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K+ +EM+ G + TY ++ GLC N DEA ML+ K+ K ++ T +++
Sbjct: 630 KEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRA 689
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+ VG+ +A + + P + +Y V+I K ++A +L M P
Sbjct: 690 MFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPD 749
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
N + R+L+ GE+ +A L ++ + LP + + +I
Sbjct: 750 SRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792
>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 804
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 163/305 (53%), Gaps = 6/305 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y++++ L R ++ A F +++ P V ++ +++ YCK+G ++ AK F
Sbjct: 207 HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDI-GPSVVSFNSIMSSYCKLGFVDMAKSFFC 265
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ + P++ ++N +ING C G + EA + ++M G P+ +TYN ++ G + G
Sbjct: 266 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLG 325
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN-PDVKSY 334
+ A ++ M G +V T+ +L G C +G D + L++++ + Y
Sbjct: 326 MISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPY 385
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+++G CK G+ DEA+SL ++ A GL P + +++ V L + G+ D A+ + +M
Sbjct: 386 SVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCY 445
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
LPN + I+ GLC KG + + L+D +I SG LD +Y+ ++ GY + G +E
Sbjct: 446 KRILPNSRTLGAIMLGLC-QKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIE 504
Query: 455 NVMQI 459
+++
Sbjct: 505 EALEL 509
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 171/337 (50%), Gaps = 6/337 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S ++ + ++ A+ + ++ + G + S+NS++ ++ + +A+ FF ++K
Sbjct: 210 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLK 269
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+VP V ++ +I G C +G I A ++ M V+P+ + YN ++ GF G +
Sbjct: 270 CGLVPS-VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMIS 328
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK-DNVSTHKSM 302
A + + +M+++G P+ +TY ++ G C G +D +L+ M GF+ ++ + M
Sbjct: 329 GAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVM 388
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
L GLC G+ D+A+ ++ + PD+ +Y +VI+G CK+GK D A+ + EM + +
Sbjct: 389 LSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRI 448
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P + A+ L + G L A LL + + + YN +I G + G +++
Sbjct: 449 LPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKS-GCIEEAL 507
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+L I SG + ++ L+ GYC+ N+ +I
Sbjct: 508 ELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKI 544
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 151/330 (45%), Gaps = 21/330 (6%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y+ +L L + + A F+ + + + PD+ Y+ +I G CK+G + A +V+D M
Sbjct: 385 YSVMLSGLCKTGRVDEALSLFYDL-EAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEM 443
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
K PN ++ G C+KG L EA+ ++ +++ G + + YN +I G +G +
Sbjct: 444 CYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCI 503
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA L +G NV+T S++ G C +A L + + P V SY +
Sbjct: 504 EEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTL 563
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD------RAILL--- 388
++ + G L +EM+A G+ PT +++ +F+ L +L+ R +L
Sbjct: 564 MDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKF 623
Query: 389 ---LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT--MYSCL 443
L+ M P+ ++YNTII LC K + +L +M NLD T Y+ L
Sbjct: 624 NHVLRDMESEGITPDQITYNTIIQYLCRVK-HLSRAFELFKKM--KSQNLDPTSATYNIL 680
Query: 444 LKGYCEEGNVENVMQIAHEMVTKKGRLLKL 473
+ C G + + + + + L K
Sbjct: 681 IDSLCIYGCIRKADRFLYSLQKRNVSLSKF 710
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 138/291 (47%), Gaps = 28/291 (9%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ + I+ A E F ++ E+ + P+V+T+ ++I GYCK I A+K+ DV+
Sbjct: 490 YNIVIDGYAKSGCIEEALELF-KVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVI 548
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P++++Y T+++ + G ++ ++ EM G P +TY+ + GLC ++
Sbjct: 549 KLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKL 608
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+ ++ + ++ KF+ LR++ + PD +Y +
Sbjct: 609 ENCNQVLRER--------------------ILEKFNHV---LRDMESEGITPDQITYNTI 645
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I C++ A L K+M+++ L PT ++N + L G + +A L + + +
Sbjct: 646 IQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNV 705
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+ +Y T+I C+ KG + L ++++ G N+ YS ++ C
Sbjct: 706 SLSKFAYTTVIKAHCV-KGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLC 755
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 115/237 (48%), Gaps = 9/237 (3%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+YN+++ F + ++ + K + + NE TY+ ++ GLC ++++A + +
Sbjct: 180 SYNSVLYNFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTS 232
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+V + S++ C +G D A + V++ + P V S+ ++ING C +G
Sbjct: 233 EWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 292
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
EA+ L +M G++P ++N + + G + A +++ M P+ ++Y +
Sbjct: 293 AEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTIL 352
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM-YSCLLKGYCEEGNVENVMQIAHEM 463
+CG C G + L+ M+ G L + YS +L G C+ G V+ + + +++
Sbjct: 353 LCGQCQL-GNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDL 408
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 20/281 (7%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLG 166
S+ SL+ + + L + +I Y G ++ A+ F A IE+G + ++NSL+
Sbjct: 473 SLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVA--IESGITPNVATFNSLIY 530
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG---MIENAKKVFDVMTVK 223
+ +I A + I +VP VS YTT++ Y G IE ++ +
Sbjct: 531 GYCKTQNIAEARKILDVIKLYGLVPSVVS-YTTLMDAYANCGSIKSIEELRREMKAEGIP 589
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNE------------MMNRGCRPNELTYNAMIYGL 271
P + Y+ + G C+ +LE + + E M + G P+++TYN +I L
Sbjct: 590 PTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYL 649
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C + A L KM+ +T+ ++ LC+ G +A +L ++ + N++
Sbjct: 650 CRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSK 709
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+Y VI C G + A+ L ++ RG ++ ++AV
Sbjct: 710 FAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAV 750
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 28/242 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
SY +L+ SIK EE ++ E + PP TY+ + +G C+ +EN +V
Sbjct: 559 SYTTLMDAYANCGSIKSIEELRREMKAEGI-PPTNVTYSVIFKGLCRGWKLENCNQVLRE 617
Query: 218 -------------DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
+ + P+ + YNT+I C+ L A + +M ++ P TY
Sbjct: 618 RILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATY 677
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK----SMLKGLCVVGKFDQAVGYLR 320
N +I LCI G + +A + ++ K NVS K +++K CV G + AV
Sbjct: 678 NILIDSLCIYGCIRKADRFLYSLQ----KRNVSLSKFAYTTVIKAHCVKGDPEMAVILFN 733
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+++ N ++ Y VIN C+ + E+ M +RG+ P + + +++++
Sbjct: 734 QLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDL----DICEVMIKSD 789
Query: 381 EL 382
EL
Sbjct: 790 EL 791
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 115/229 (50%), Gaps = 16/229 (6%)
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV-DEAKMLMAKMRLNGFKDNVSTHK 300
++E+ + +M +R + +YN+++Y ++ D K + K N T+
Sbjct: 159 VDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIKDK--------NEHTYS 210
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ GLC K + AV +LR ++ P V S+ +++ +CK+G D A S +
Sbjct: 211 TVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKC 270
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG---LCMAKGR 417
GL P+V+S N + L G + A+ L M + P+ V+YN ++ G L M G
Sbjct: 271 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGA 330
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ ++D++D+ G + D Y+ LL G C+ GN++ + + +M+++
Sbjct: 331 GEVIQDMLDK----GLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSR 375
>gi|222622724|gb|EEE56856.1| hypothetical protein OsJ_06476 [Oryza sativa Japonica Group]
Length = 538
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 155/303 (51%), Gaps = 2/303 (0%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ L A + F +++ V P + S+ +I+ + + + A ++
Sbjct: 97 YNTLVNALAEAGREGEALKAFDEMLASGVAP-NASSQNILIKMHARRSEFDLAWELIHKS 155
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
V+P++ Y+T+I G C+ G++ EA ++ M+ + CRP TY ++ C +GR+ EA
Sbjct: 156 GVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEA 215
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
K+LMA+M G NV T+ +++ LC KFD+ L + P +Y + +NG
Sbjct: 216 KLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNG 275
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CK GK+ EA+ LL M GL+PT ++++ + L + L AI LL++ ++
Sbjct: 276 LCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAG 335
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+YNT++ LC G+ + + L+ MI+ G + ++ L++ C G +
Sbjct: 336 VVAYNTVMSSLC-EMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLI 394
Query: 461 HEM 463
H +
Sbjct: 395 HSL 397
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 121/236 (51%), Gaps = 4/236 (1%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN+L YNT++N + G EA K +EM+ G PN + N +I ++ R E +
Sbjct: 92 PNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIK---MHARRSEFDLA 148
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +G + +V T+ +++ GLC GK +A G L ++E N P V++Y ++ +C+
Sbjct: 149 WELIHKSGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCR 208
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+ EA L+ EM G P V ++N + R L ++ + D +L + D P+ V+
Sbjct: 209 DGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVT 268
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
YN + GLC KG+ ++ +L+D M+ G +S LL C + + + +
Sbjct: 269 YNIYMNGLC-KKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYL 323
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 128/323 (39%), Gaps = 74/323 (22%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S N L+ + R + LA E H+ + V PDV TY+T+I G C+ G I A V D
Sbjct: 131 SQNILIKMHARRSEFDLAWELIHK----SGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDW 186
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY------- 269
M K P + Y ++ +C+ G + EAK M EM GC PN +TYN +I
Sbjct: 187 MLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDK 246
Query: 270 ----------------------------GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
GLC G+ EA L+ M G + T
Sbjct: 247 FDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSI 306
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L LC + A+ L E V +Y V++ C++GK + LL +M +G
Sbjct: 307 LLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKG 366
Query: 362 LKPTVFSFNAVFRILV--------------------------------ENGELDRAILLL 389
++P +FN + R L +G+L A L+
Sbjct: 367 IEPNTRTFNILIRSLCVGGKSSLAKSLIHSLGFAANVVTYNILLHWFYYHGKLTEANRLI 426
Query: 390 KQMPQMDCLPNFVSYNTIICGLC 412
M + + P+ V+Y II GLC
Sbjct: 427 SVMEEKNIAPDEVTYTIIIDGLC 449
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 27/297 (9%)
Query: 229 YNTMINGFCKKGELEEA-------KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
YN + G+L+E K+ + + G PN L YN ++ L GR EA
Sbjct: 55 YNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEAL 114
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+M +G N S+ ++K +FD A + ++ + PDV +Y +I G
Sbjct: 115 KAFDEMLASGVAPNASSQNILIKMHARRSEFDLA---WELIHKSGVEPDVGTYSTLIAGL 171
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C+ GK EA +L M + +P V ++ + + +G + A LL+ +M ++ CLPN
Sbjct: 172 CRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNV 231
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF----TMYSCLLKGYCEEGNVENVM 457
V+YN +I LC D D V++++ D+ Y+ + G C++G + +
Sbjct: 232 VTYNVLIRALC-----DDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEAL 286
Query: 458 QIAHEMVTKK--------GRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVV 506
++ M+ + LL +R++DA+ L+ T W + V + V+
Sbjct: 287 ELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVM 343
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 42/280 (15%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +++AY G + A + +++ + +YN L+ L + E+ +
Sbjct: 200 TPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESST 259
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPN------------------ 225
++ P V TY + G CK G + A ++ DVM ++P
Sbjct: 260 KDWKPSTV-TYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLL 318
Query: 226 -----------------LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
++AYNT+++ C+ G+ K + +M+ +G PN T+N +I
Sbjct: 319 DAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILI 378
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
LC+ G+ AK L+ + GF NV T+ +L GK +A + + E N+
Sbjct: 379 RSLCVGGKSSLAKSLIHSL---GFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIA 435
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
PD +Y ++I+G C+ K D A + + GL V +
Sbjct: 436 PDEVTYTIIIDGLCRERKFDAATACFLKSLTSGLSMDVLT 475
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
AI+ ++ +++ A + +YN+++ L + + + ++K+ + P+ T+ +I
Sbjct: 320 AIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGI-EPNTRTFNILI 378
Query: 202 RGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
R C G AK + + N++ YN +++ F G+L EA + ++ M + P+E
Sbjct: 379 RSLCVGGKSSLAKSLIHSLGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDE 438
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+TY +I GLC + D A K +G +V T +L L K + +
Sbjct: 439 VTYTIIIDGLCRERKFDAATACFLKSLTSGLSMDVLT--VLLNRLVYADK----IWEINR 492
Query: 322 VMEA-NMNPDVKSYEVVINGFCKIG 345
+ + + PD +++ I FC++G
Sbjct: 493 IFDGKDFVPDHHVFDLTIRTFCRVG 517
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 164/334 (49%), Gaps = 5/334 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G V+ A + + + G +Y+ N ++ L + ++ F Q V+E V PD+ T
Sbjct: 214 GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQ-VQEKGVYPDIVT 272
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y T+I Y G++E A ++ + M K P + YNT+ING CK G+ E AK+ EM+
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G P+ TY +++ C G V E + + + MR ++ SM+ G D
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ Y +V EA + PD Y ++I G+C+ G A++L EM +G V ++N +
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L + L A L +M + P+ + +I G C G +Q+ +L +M
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL-GNLQNAMELFQKMKEKRI 511
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
LD Y+ LL G+ + G+++ +I +MV+K+
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 176/355 (49%), Gaps = 17/355 (4%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
D I ++A R +A + + AC N+L+G LVR+ ++LA +
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC----NALIGSLVRIGWVELAWGVYQ 224
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+I + V +V T M+ CK G +E + K P+++ YNT+I+ + K
Sbjct: 225 EISRSGV-GINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G +EEA + MN M +G P TYN +I GLC +G+ + AK + A+M +G + +T+
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+S+L C G + ++ ++ PD+ + +++ F + G D+A+ ++
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 360 RGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
GL P N ++ IL++ G + A+ L +M Q C + V+YNTI+ GLC K
Sbjct: 404 AGLIPD----NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ + + L + M D + L+ G+C+ GN++N M++ +M K+ RL
Sbjct: 460 -MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 166/349 (47%), Gaps = 42/349 (12%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++S++ + R ++ A +F+ VKE + PD YT +I+GYC+ GMI A +
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNS-VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + +++ YNT+++G CK+ L EA K NEM R P+ T +I G C
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + A L KM+ + +V T+ ++L G VG D A +++ + P SY
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTV---------------------------- 366
+++N C G EA + EM ++ +KPTV
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 367 -------FSFNAVFRILVENGELDRAILLLKQMP--QMDCLPNFVSYNTIICGLCMAKGR 417
S+N + V + +A L+K+M Q +P+ +YN+I+ G C + +
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFC-RQNQ 672
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M++ E ++ +MI G N D + Y+C++ G+ + N+ +I EM+ +
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 172/343 (50%), Gaps = 9/343 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY +G ++ A + +Y+YN+++ L + + A+E F ++++
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+ PD +TY +++ CK G + +KVF M V P+L+ +++M++ F + G L++A
Sbjct: 336 L-SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
N + G P+ + Y +I G C G + A L +M G +V T+ ++L G
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +A + E + PD + ++I+G CK+G A+ L ++M+ + ++
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V ++N + + G++D A + M + LP +SY+ ++ LC +KG + + +
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC-SKGHLAEAFRVW 573
Query: 426 DRMIRSGHNLDFTMYSC--LLKGYCEEGNVENVMQIAHEMVTK 466
D MI N+ T+ C ++KGYC GN + +M+++
Sbjct: 574 DEMI--SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 154/309 (49%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
++ L+ V+ ++ A E F +++ + +I ++G +E A V+ +
Sbjct: 168 FDLLIRTYVQARKLREAHEAF-TLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ V N+ N M+N CK G++E+ ++++ +G P+ +TYN +I G +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA LM M GF V T+ +++ GLC GK+++A ++ + ++PD +Y +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+ CK G E + +MR+R + P + F+++ + +G LD+A++ + +
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ V Y +I G C KG + +L + M++ G +D Y+ +L G C+ +
Sbjct: 407 IPDNVIYTILIQGYC-RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 458 QIAHEMVTK 466
++ +EM +
Sbjct: 466 KLFNEMTER 474
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 127/246 (51%), Gaps = 6/246 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ ++ LI + GN++ A+ F + K+ + +YN+LL +V I A+E +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKG 240
+V + ++P +S Y+ ++ C G + A +V+D M +KP ++ N+MI G+C+ G
Sbjct: 541 MVSKEILPTPIS-YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR--LNGFKDNVST 298
+ + + +M++ G P+ ++YN +IYG + +A L+ KM G +V T
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ S+L G C + +A LR ++E +NPD +Y +INGF EA + EM
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 359 ARGLKP 364
RG P
Sbjct: 720 QRGFSP 725
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 128/247 (51%), Gaps = 6/247 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+ L+ ++ +++ A E F Q +KE + DV TY T++ G+ K+G I+ AK+++
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELF-QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P ++Y+ ++N C KG L EA + +EM+++ +P + N+MI G C +G
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME--ANMNPDVKS 333
+ + + KM GF + ++ +++ G +A G ++ + E + PDV +
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +++GFC+ + EA +L++M RG+ P ++ + V L A + +M
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 394 QMDCLPN 400
Q P+
Sbjct: 720 QRGFSPD 726
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 123/267 (46%), Gaps = 18/267 (6%)
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-----------------CRP 259
F K L+ + MI+ + G L +A+ C+ M+ R C
Sbjct: 104 FHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGS 163
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N+ ++ +I ++ EA +R GF ++ +++ L +G + A G
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ + + + +V + +++N CK GK ++ + L +++ +G+ P + ++N +
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
G ++ A L+ MP P +YNT+I GLC G+ + +++ M+RSG + D T
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC-KHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y LL C++G+V ++ +M ++
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSR 369
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 180/365 (49%), Gaps = 43/365 (11%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
++ A ++ ++E + +Y++N ++ VL + +K A+ F I++ + P + TY
Sbjct: 207 IENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFL-GIMESFGIKPTIVTYN 265
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
T+++GY G IE A+ + M K P+L YN +++ C +G A + + EM
Sbjct: 266 TLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVLREMKGI 322
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G P+ ++YN +I G NG ++ A +M G T+ +++ GL + K + A
Sbjct: 323 GLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA 382
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+R + E + D +Y +VING+C+ G + +A +L EM G+KPT F++ ++ +
Sbjct: 383 EILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYV 442
Query: 376 LVE-----------------------------------NGELDRAILLLKQMPQMDCLPN 400
L G +DRA LLK+M +M+ P+
Sbjct: 443 LCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPD 502
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+YN ++ GLC +G+ ++ +L+ M R G D Y+ L+ GY ++G+ ++ +
Sbjct: 503 DVTYNCLMRGLC-GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVR 561
Query: 461 HEMVT 465
EM++
Sbjct: 562 DEMLS 566
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 156/338 (46%), Gaps = 8/338 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L++ Y RG ++ A + K L +YN +L + A E ++
Sbjct: 267 LVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIG 323
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+VP VS Y +IRG G +E A D M + P YNT+I+G + ++E A
Sbjct: 324 LVPDSVS-YNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA 382
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + E+ +G + +TYN +I G C +G +A L +M +G K T+ S++
Sbjct: 383 EILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYV 442
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC K +A V+ M PD+ +++G C G D A SLLKEM + P
Sbjct: 443 LCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPD 502
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++N + R L G+ + A L+ +M + P+ +SYNT+I G KG + +
Sbjct: 503 DVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYS-KKGDTKHAFIVR 561
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D M+ G N Y+ LLKG + + E ++ EM
Sbjct: 562 DEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREM 599
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 155/287 (54%), Gaps = 12/287 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+ + G+++ A + + + Y+YN+L+ L N I+ AE +I ++
Sbjct: 334 LIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 393
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF----DVMT--VKPNLLAYNTMINGFCKKGEL 242
+V D TY +I GYC+ G +AKK F ++MT +KP Y ++I C++ +
Sbjct: 394 IVL-DSVTYNIVINGYCQHG---DAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKT 449
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKS 301
EA + +++ +G +P+ + N ++ G C G +D A L+ +M R+N D+V T+
Sbjct: 450 READELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDV-TYNC 508
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+++GLC GKF++A + + + PD SY +I+G+ K G + A + EM + G
Sbjct: 509 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLG 568
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
PT+ ++NA+ + L +N + + A LL++M +PN S+ ++I
Sbjct: 569 FNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVI 615
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 156/317 (49%), Gaps = 40/317 (12%)
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-DV--MTVKPNLLAYNTMINGFCKKG 240
++KE P T ++ ++ IENA + D+ M +K N+ +N MIN CK+G
Sbjct: 181 LMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEG 240
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L++AK + M + G +P +TYN ++ G + GR++ A+M++++M+ GF+ ++ T+
Sbjct: 241 KLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYN 300
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+L +C G+ A LR + + PD SY ++I G G + A + EM +
Sbjct: 301 PILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQ 357
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC-------- 412
G+ PT +++N + L +++ A +L++++ + + + V+YN +I G C
Sbjct: 358 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKA 417
Query: 413 -------MAKG-------------------RMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
M G + ++ ++L ++++ G D M + L+ G
Sbjct: 418 FALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDG 477
Query: 447 YCEEGNVENVMQIAHEM 463
+C GN++ + EM
Sbjct: 478 HCATGNMDRAFSLLKEM 494
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 6/219 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIEN-GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKE 187
+I Y G+ K A F H + ++Y SL+ VL R N + A+E F ++V +
Sbjct: 404 VINGYCQHGDAKKA-FALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGK 462
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENA---KKVFDVMTVKPNLLAYNTMINGFCKKGELEE 244
+ PD+ T++ G+C G ++ A K D M + P+ + YN ++ G C +G+ EE
Sbjct: 463 GM-KPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEE 521
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A++ M EM RG +P+ ++YN +I G G A ++ +M GF + T+ ++LK
Sbjct: 522 ARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLK 581
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
GL + A LR + + P+ S+ VI K
Sbjct: 582 GLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSK 620
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 133/281 (47%), Gaps = 36/281 (12%)
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
D + K +L ++ M+ +C+ ++EA +C M +G P T N ++ L R+
Sbjct: 149 DRLQTKSTIL-FDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRI 207
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPDVKSYEV 336
+ A + A M K NV T M+ LC GK +A G+L +ME+ + P + +Y
Sbjct: 208 ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFL-GIMESFGIKPTIVTYNT 266
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV------------------------ 372
++ G+ G+ + A ++ EM+++G +P + ++N +
Sbjct: 267 LVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIGLVP 326
Query: 373 ----FRILVE----NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+ IL+ NG+L+ A +M + +P F +YNT+I GL M + +++ E L
Sbjct: 327 DSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFM-ENKIEAAEIL 385
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ + G LD Y+ ++ GYC+ G+ + + EM+T
Sbjct: 386 IREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMT 426
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 183/377 (48%), Gaps = 42/377 (11%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N L+ + + A F+++ +E V PDV TY+T+I C++G +++A + F+ M
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEM-REQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQM 452
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V P++ Y+ +I GFC G+L +AK + +MMN+G RP+ +N +I LC GRV
Sbjct: 453 IDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRV 512
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+A+ + G NV + +++ G C+VGK + A+ ++ A + P+V Y +
Sbjct: 513 MDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTL 572
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL--------------- 382
+NG+CK+G+ DE +SL +E+ +G+KP+ +N + L + G
Sbjct: 573 VNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGI 632
Query: 383 --------------------DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
D AILL K++ M+ + + N +I G+ + R+++ +
Sbjct: 633 AMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIR-RVEEAK 691
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVD 482
DL + RSG YS ++ +EG VE + M G L VV
Sbjct: 692 DLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSM-ENAGCEQPNSQLLNHVVR 750
Query: 483 ALL-LMWIVTGGSWISR 498
LL IV G+++S+
Sbjct: 751 ELLEKREIVRAGTYLSK 767
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 187/414 (45%), Gaps = 11/414 (2%)
Query: 65 QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLL-SHS---LISIAASLLKNSNK 120
+ P A+ FN S + P T Y + D +H ++ +LK
Sbjct: 82 RDGPALAVALFNRVSRAH-GPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLG 140
Query: 121 LSDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+ IS L++ + A+ H+ + ++SY +L L A+E
Sbjct: 141 IDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADE 200
Query: 180 FFHQIVKENVVP-PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING 235
+ + V P+ Y T+I G+ K G + A +F+ M + P+L YN ++N
Sbjct: 201 LLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNA 260
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
CK +++A+ + +M+++G P+ TYN++IYG G+ EA + KM G +
Sbjct: 261 LCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPD 320
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
V T S++ LC GK A ++ D+ SY++++NG+ G + L
Sbjct: 321 VVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFN 380
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
M + G+ P FN + + + G LDRA ++ +M + P+ V+Y+T+I LC
Sbjct: 381 LMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRI- 439
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
G+M D + ++MI G + Y L++G+C G++ + +M+ K R
Sbjct: 440 GKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMR 493
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 184/389 (47%), Gaps = 54/389 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIKAY G + A F++ ++ + +Y++++ L R+ + A E F+Q++ +
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456
Query: 189 VVP----------------------------------PDVSTYTTMIRGYCKMGMIENAK 214
V P PD+ + +I CK+G + +A+
Sbjct: 457 VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQ 516
Query: 215 KVFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+FD + + PN++ YNT+++G+C G++E A + + M++ G +PN + Y ++ G
Sbjct: 517 NIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGY 576
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C GR+DE L ++ G K + + + +L GL G+ A + E+ + D
Sbjct: 577 CKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDR 636
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +V+ G K SDEAI L KE+ A +K + + N + + + ++ A L
Sbjct: 637 YTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFAS 696
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ + +P+ V+Y+ ++ L + +G +++ +D+ M +G CE+
Sbjct: 697 ISRSGLVPSVVTYSIMMTNL-IKEGLVEEADDMFSSMENAG---------------CEQP 740
Query: 452 NVENVMQIAHEMVTKKGRLLKLKNFLTRV 480
N + + + E++ K+ +++ +L+++
Sbjct: 741 NSQLLNHVVRELLEKR-EIVRAGTYLSKI 768
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 162/346 (46%), Gaps = 12/346 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI Y G K A+ +K++ + L + NSL+ L + IK A + F +
Sbjct: 292 LIYGYSSTGQWKEAV---RVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMA 348
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGEL 242
+ D+ +Y M+ GY G + + ++F++M + P+ +N +I + K G L
Sbjct: 349 MKGQ-KTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGML 407
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ A NEM +G P+ +TY+ +I LC G++D+A +M G ++ST+ +
Sbjct: 408 DRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFL 467
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
++G C G +A + +M M PD+ + +IN CK+G+ +A ++ + GL
Sbjct: 468 IQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGL 527
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P V +N + G+++ A+ + M PN V Y T++ G C GR+ +
Sbjct: 528 HPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKV-GRIDEGL 586
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
L ++ G T+Y+ +L G + G HEM T+ G
Sbjct: 587 SLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEM-TESG 631
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 164/322 (50%), Gaps = 8/322 (2%)
Query: 150 KQIENGA---CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
K++EN + +Y L+ L R I E + ++ ++NV DV Y+ +I YC+
Sbjct: 207 KEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAG-DVYFYSAVINAYCR 265
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G + A +VFD V+PN Y +INGFCK G++E A+ + +M RG N++
Sbjct: 266 GGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIV 325
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
+N MI G C +G V++A + A M G + ++ T+ ++ GLC V + + A L +
Sbjct: 326 FNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA 385
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
E + P+ SY +I+ K G EA L ++M +G +P+V ++N + ++NG +
Sbjct: 386 EKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIR 445
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A K+M + +P+ +Y ++ G C+ G++ L + M G + Y+ L
Sbjct: 446 EAERFKKEMEKKGLVPDIYTYAGLVHGHCV-NGKVDVALRLFEEMKHRGTKPNVVAYTAL 504
Query: 444 LKGYCEEGNVENVMQIAHEMVT 465
+ G +EG E Q+ +M+
Sbjct: 505 VSGLAKEGRSEEAFQLYDDMLA 526
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 173/358 (48%), Gaps = 9/358 (2%)
Query: 94 CYTAITDVLLSHSLISIAASLLKN-SNKLSDFFISK---LIKAYGDRGNVKAAIFWFHQA 149
CY ++ D A LLK N+ + + L+ G++ + +
Sbjct: 185 CYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEM 244
Query: 150 KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
K+ +Y Y++++ R +++ A E F + V V P+ TY +I G+CK+G
Sbjct: 245 KRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGV-EPNERTYGALINGFCKIGQ 303
Query: 210 IENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
IE A+ + M ++ N + +NTMI+G+C+ G +E+A + M G + TYN
Sbjct: 304 IEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNT 363
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ GLC R+++AK L+ M G N ++ +++ G +A R++
Sbjct: 364 LACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKG 423
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
P V +Y V+I+G+ K G EA KEM +GL P ++++ + NG++D A+
Sbjct: 424 SRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVAL 483
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
L ++M PN V+Y ++ GL +GR ++ L D M+ +G D T+YS L+
Sbjct: 484 RLFEEMKHRGTKPNVVAYTALVSGLAK-EGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 155/328 (47%), Gaps = 8/328 (2%)
Query: 91 TTPCYTAITDVLLSHSLISIAASL---LKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWF 146
T YT + D L IS ++ +K N D +F S +I AY GNV+ A F
Sbjct: 217 TVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVF 276
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
+ +Y +L+ ++ I+ AE + V + + TMI GYC+
Sbjct: 277 DECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQI-VFNTMIDGYCR 335
Query: 207 MGMIENA---KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
GM+E A K V + M ++ ++ YNT+ G C+ +E+AKK ++ M +G PN ++
Sbjct: 336 HGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVS 395
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y +I G + EA+ L M G + +V T+ M+ G G +A + + +
Sbjct: 396 YTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEME 455
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ + PD+ +Y +++G C GK D A+ L +EM+ RG KP V ++ A+ L + G +
Sbjct: 456 KKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSE 515
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGL 411
A L M P+ Y+ ++ L
Sbjct: 516 EAFQLYDDMLAAGLTPDDTLYSVLVGSL 543
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+YN+L L RVN ++ A++ H I+ E V P+ +YTT+I + K G + A+++F
Sbjct: 358 IYTYNTLACGLCRVNRMEDAKKLLH-IMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLF 416
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P+++ YN MI+G+ K G + EA++ EM +G P+ TY +++G C+N
Sbjct: 417 RDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVN 476
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+VD A L +M+ G K NV + +++ GL G+ ++A +++ A + PD Y
Sbjct: 477 GKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLY 536
Query: 335 EVVINGFCKIGKSD 348
V++ + D
Sbjct: 537 SVLVGSLHTDSRKD 550
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 136/275 (49%), Gaps = 4/275 (1%)
Query: 198 TTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+ ++ G+CK G +++A + D + V N YN++++ + ++ + + EM N
Sbjct: 152 SVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMEN 211
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
RG P TY ++ GL G + + + + +M+ +V + +++ C G +
Sbjct: 212 RGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRR 271
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A + + P+ ++Y +INGFCKIG+ + A LL +M+ RG+ FN +
Sbjct: 272 ASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMID 331
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+G +++A+ + M +M + +YNT+ CGLC RM+D + L+ M G
Sbjct: 332 GYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVN-RMEDAKKLLHIMAEKGVA 390
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
++ Y+ L+ + +EG++ ++ +M K R
Sbjct: 391 PNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSR 425
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 174/326 (53%), Gaps = 15/326 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++ + + ++LA + FH + K + + P+V T+T +I GYCK G +E A ++
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSM-KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + N++ Y +I+GFCKKGE++ A++ + M+ PN L Y +I G G
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A +AKM G + +++ + ++ GLC GK +A + ++ ++++ PD+ +
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++N + K G+ A+++ ++ RG +P V + + + + +NG+L AI+
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF------- 396
Query: 397 CL--PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C+ N V Y +I LC +G +VE L ++ +G D MY+ + G C++GN+
Sbjct: 397 CIEKANDVMYTVLIDALC-KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRV 480
+ ++ MV ++G LL L + T +
Sbjct: 456 DAFKLKTRMV-QEGLLLDLLAYTTLI 480
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 156/313 (49%), Gaps = 9/313 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S+NS++ + ++ +K AE+ H + + PDV +Y ++I G+C+ G I +A V +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFG-CEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 220 MTV------KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
+ KP+++++N++ NGF K L+E M M+ + C PN +TY+ I C
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCK 175
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+G + A M+ + NV T ++ G C G + AV + + M+ +V +
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I+GFCK G+ A + M ++P + + + G+ D A+ L +M
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ +Y II GLC G++++ ++V+ M +S D +++ ++ Y + G +
Sbjct: 296 NQGMRLDITAYGVIISGLC-GNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 454 ENVMQIAHEMVTK 466
+ + + H+++ +
Sbjct: 355 KAAVNMYHKLIER 367
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 175/378 (46%), Gaps = 18/378 (4%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN--VVPPDV 194
G VK A H + + SYNSL+ R I+ A + + + PD+
Sbjct: 70 GQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDI 129
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVM--TVKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
++ ++ G+ KM M++ VM PN++ Y+T I+ FCK GEL+ A K + M
Sbjct: 130 VSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSM 189
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
PN +T+ +I G C G ++ A L +MR NV T+ +++ G C G+
Sbjct: 190 KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEM 249
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+A ++E + P+ Y +I+GF + G SD A+ L +M +G++ + ++ +
Sbjct: 250 QRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVI 309
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L NG+L A +++ M + D +P+ V + T++ GRM+ ++ ++I G
Sbjct: 310 ISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY-FKSGRMKAAVNMYHKLIERG 368
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVM-------------QIAHEMVTKKGRLLKLKNFLTR 479
D S ++ G + G + + + + + K+G ++++ ++
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSK 428
Query: 480 VVDALLLMWIVTGGSWIS 497
+ +A L+ SWI+
Sbjct: 429 ISEAGLVPDKFMYTSWIA 446
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 179/390 (45%), Gaps = 43/390 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S I + G ++ A+ FH K+ + ++ L+ + +++A + ++ +
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ +V TYT +I G+CK G ++ A++++ M V+PN L Y T+I+GF ++G+ +
Sbjct: 227 VRM-SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A K + +M+N+G R + Y +I GLC NG++ EA ++ M + ++ +M+
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKS------------------------------ 333
G+ AV ++E PDV +
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM 405
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y V+I+ CK G E L ++ GL P F + + L + G L A L +M
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
Q L + ++Y T+I GL +KG M + + D M+ SG + D ++ L++ Y +EGN
Sbjct: 466 QEGLLLDLLAYTTLIYGLA-SKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGN- 523
Query: 454 ENVMQIAHEMVTKKGRLLKLKNFLTRVVDA 483
M A +++ R + +T V DA
Sbjct: 524 ---MAAASDLLLDMQR----RGLVTAVSDA 546
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 134/250 (53%), Gaps = 5/250 (2%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+ ++N++++ CK G+++ A+ ++ M GC P+ ++YN++I G C NG + A ++
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 284 MAKMRL-NGF--KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+ +R +GF K ++ + S+ G + D+ Y+ VM +P+V +Y I+
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYM-GVMLKCCSPNVVTYSTWIDT 172
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
FCK G+ A+ M+ L P V +F + + G+L+ A+ L K+M ++ N
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+Y +I G C KG MQ E++ RM+ + +Y+ ++ G+ + G+ +N M+
Sbjct: 233 VVTYTALIDGFC-KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 461 HEMVTKKGRL 470
+M+ + RL
Sbjct: 292 AKMLNQGMRL 301
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 7/276 (2%)
Query: 95 YTAITDVLL----SHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT I D S + + A +L +L +I G +K A +
Sbjct: 271 YTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDME 330
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + + + +++ + +K A +H+++ E PDV +TMI G K G +
Sbjct: 331 KSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLI-ERGFEPDVVALSTMIDGIAKNGQL 389
Query: 211 ENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
A F + K N + Y +I+ CK+G+ E ++ +++ G P++ Y + I G
Sbjct: 390 HEAIVYFCIE--KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAG 447
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC G + +A L +M G ++ + +++ GL G +A ++ + ++PD
Sbjct: 448 LCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
++++I + K G A LL +M+ RGL V
Sbjct: 508 SAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM-LMAKMRLNGFKDNVSTHK 300
+ EA + ++ + P+ T N I+ L IN + +A + G+ + S+
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQL-INSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA- 359
S++ +C +G+ A + ++ PDV SY +I+G C+ G A +L+ +RA
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 360 RGL--KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
G KP + SFN++F + LD + + M + C PN V+Y+T I C + G
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKS-GE 178
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+Q M R + + ++CL+ GYC+ G++E + + EM
Sbjct: 179 LQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+S +I G + AI +F K + Y L+ L + E F +I
Sbjct: 376 LSTMIDGIAKNGQLHEAIVYFCIEKAND-----VMYTVLIDALCKEGDFIEVERLFSKIS 430
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGEL 242
+ +VP D YT+ I G CK G + +A K+ M + +LLAY T+I G KG +
Sbjct: 431 EAGLVP-DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLM 489
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
EA++ +EM+N G P+ ++ +I G + A L+ M+ G VS
Sbjct: 490 VEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 25/169 (14%)
Query: 314 QAVGYLRNVMEANMNPDV----KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+A+ +L + +++ PD K +IN C I ++ L + +RG P SF
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGI----LSLKFLAYLVSRGYTPHRSSF 59
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE--DLVDR 427
N+V + + G++ A ++ MP+ C P+ +SYN++I G C R D+ LV
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHC----RNGDIRSASLVLE 115
Query: 428 MIRSGHNL----DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLK 472
+R+ H D ++ L G+ + M++ E+ G +LK
Sbjct: 116 SLRASHGFICKPDIVSFNSLFNGFSK-------MKMLDEVFVYMGVMLK 157
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 159/309 (51%), Gaps = 5/309 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L + N L+ + + + +I+K PD T T+++G C G ++ +
Sbjct: 100 LVTLNILINCFCHLGQMAFSFSVLGKILKLGY-QPDTITLNTLMKGLCLKGEVKRSLHFH 158
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D + + N ++Y T++NG CK GE A K + + +R RP+ + Y+ +I GLC +
Sbjct: 159 DKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKD 218
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
V++A ++M G NV T+ +++ G C+ G+ A L ++ N+NP+V +Y
Sbjct: 219 KIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTY 278
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I+ CK GK EA LL EM +G V ++N+V L ++ LD+A L +M +
Sbjct: 279 NILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKK 338
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN +Y +I GLC GR+++ + L ++ G +D Y+ ++ G C+EG +
Sbjct: 339 WGIQPNKYTYTALIDGLCKG-GRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFD 397
Query: 455 NVMQIAHEM 463
+ + +M
Sbjct: 398 KALAMKSKM 406
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 166/329 (50%), Gaps = 9/329 (2%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
S+ +LK + ++ L+K +G VK ++ FH K + G + SY +LL
Sbjct: 121 SVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLH-FHD-KVVAQGFQMNQVSYGTLLN 178
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
L ++ + A + +++++ PDV Y+T+I G CK ++ A F M +
Sbjct: 179 GLCKIGETRCAVKLL-RMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIF 237
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN++ Y+T+I GFC G+L A +NEM+ + PN TYN +I LC G+V EAK L
Sbjct: 238 PNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKL 297
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+A+M G +V T+ S+L GLC D+A + + + P+ +Y +I+G CK
Sbjct: 298 LAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCK 357
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+ A L + + +G V ++N + L + G D+A+ + +M C+PN V+
Sbjct: 358 GGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVT 417
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
++ II L K E L+ MI G
Sbjct: 418 FDIIIRSL-FEKDENDKAEKLLHGMIAKG 445
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 139/267 (52%), Gaps = 3/267 (1%)
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+V ++PNL+ N +IN FC G++ + + +++ G +P+ +T N ++ GLC+ G V
Sbjct: 92 EVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEV 151
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+ K+ GF+ N ++ ++L GLC +G+ AV LR + + + PDV Y +
Sbjct: 152 KRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTI 211
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G CK ++A EM ARG+ P V +++ + G+L A LL +M +
Sbjct: 212 IDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNI 271
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN +YN +I LC +G++++ + L+ M G D Y+ +L G C+ N++
Sbjct: 272 NPNVYTYNILIDALC-KEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKAT 330
Query: 458 QIAHEMVTKKGRLLKLKNFLTRVVDAL 484
+ +M KK + K T ++D L
Sbjct: 331 ALFMKM--KKWGIQPNKYTYTALIDGL 355
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 111/206 (53%), Gaps = 4/206 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++L+ + A ++++ +N+ P+V TY +I CK G ++ AKK+
Sbjct: 242 TYSTLIWGFCLAGQLMGAFSLLNEMILKNI-NPNVYTYNILIDALCKEGKVKEAKKLLAE 300
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K +++ YN++++G CK L++A +M G +PN+ TY A+I GLC GR
Sbjct: 301 MHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGR 360
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ A+ L + + G +V T+ M+ GLC G FD+A+ + + P+ ++++
Sbjct: 361 LKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDI 420
Query: 337 VINGFCKIGKSDEAISLLKEMRARGL 362
+I + ++D+A LL M A+GL
Sbjct: 421 IIRSLFEKDENDKAEKLLHGMIAKGL 446
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 121/240 (50%), Gaps = 1/240 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P ++ + ++ K A +M +G PN +T N +I C G++ + +
Sbjct: 63 PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ K+ G++ + T +++KGLC+ G+ +++ + V+ + SY ++NG CK
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
IG++ A+ LL+ + R +P V ++ + L ++ +++A +M PN ++
Sbjct: 183 IGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVIT 242
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+T+I G C+A G++ L++ MI N + Y+ L+ C+EG V+ ++ EM
Sbjct: 243 YSTLIWGFCLA-GQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEM 301
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D V ++ P + + ++ K+ AISL ++M +G++P + + N +
Sbjct: 47 DDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNIL 106
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
G++ + +L ++ ++ P+ ++ NT++ GLC+ KG ++ D+++ G
Sbjct: 107 INCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCL-KGEVKRSLHFHDKVVAQG 165
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQI 459
++ Y LL G C+ G +++
Sbjct: 166 FQMNQVSYGTLLNGLCKIGETRCAVKL 192
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 174/364 (47%), Gaps = 46/364 (12%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
YSY L+ L ++ A +V + ++ TYT +I+G CK G I +A+ + D
Sbjct: 250 YSYTILIQGLCEARCVREALVLVFMMVHDGC-SLNLHTYTLLIKGLCKEGRIHDARGLLD 308
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M ++ P++ YN MI+G+CK G +++A M GC P++ TYN++IYGLC G
Sbjct: 309 EMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GG 367
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD------------------QAVG 317
++DEA+ L+ GF V T +++ G C + D QA G
Sbjct: 368 KLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYG 427
Query: 318 YLRNV----------------MEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
L NV M AN + P+V +Y +I+G+CK+G A+ + K M
Sbjct: 428 VLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHE 487
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G P +++ ++ L+++ +L +A+ L+ +M + P ++Y T+I G C K +
Sbjct: 488 GCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQC-KKHEFDN 546
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRV 480
L + M ++G D Y+ L C+ G E A+ + +KG +L K T +
Sbjct: 547 AFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEE----AYSFLVRKGVVLT-KVTYTSL 601
Query: 481 VDAL 484
VD
Sbjct: 602 VDGF 605
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 178/393 (45%), Gaps = 57/393 (14%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ +I Y G V AA+ F K +E+ C ++Y SL+ L++ + A +
Sbjct: 462 TSIIDGYCKVGMVGAALEVF---KLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITK 518
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ +E+ + P V TYTT+I+G CK +NA ++F++M + P+ AYN + + CK G
Sbjct: 519 M-QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG 577
Query: 241 ELEEAKK--------------------------------CMNEMMNRGCRPNELTYNAMI 268
EEA + +M+N GC+ + TY+ ++
Sbjct: 578 RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLL 637
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
LC +++EA ++ +M ++G K N+ + ++ + GK D A ++ +
Sbjct: 638 QALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHK 697
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P +Y V I+ +CKIG+ +EA L+ EM G+ P V ++N G +DRA
Sbjct: 698 PSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFST 757
Query: 389 LKQMPQMDCLPNFVSYNTII---CGLCMAKGRMQD------------VEDLVDRMIRSGH 433
LK+M C PN +Y ++ + + D V L++RM++ G
Sbjct: 758 LKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGL 817
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
N YS ++ G+C+ +E + M+ K
Sbjct: 818 NPTVVTYSSIIAGFCKATRLEEACVLLDHMLGK 850
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 167/375 (44%), Gaps = 73/375 (19%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++YNSL+ L + AEE + + P V T+T +I GYCK I++A +V
Sbjct: 355 WTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPT-VITFTNLINGYCKAERIDDALRVKS 412
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM---------------------- 253
M K +L AY +IN KK L+EAK+ +NEM
Sbjct: 413 NMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVG 472
Query: 254 -------------NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ GC PN TY ++IYGL + ++ +A L+ KM+ +G V T+
Sbjct: 473 MVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYT 532
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS-------- 352
++++G C +FD A + + + PD ++Y V+ + CK G+++EA S
Sbjct: 533 TLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVV 592
Query: 353 ------------------------LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
L+++M G K +++++ + + L + +L+ A+ +
Sbjct: 593 LTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSI 652
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
L QM N V+Y II + + +G+ + L + MI SGH T Y+ + YC
Sbjct: 653 LDQMTVSGVKCNIVAYTIIISEM-IKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYC 711
Query: 449 EEGNVENVMQIAHEM 463
+ G +E + EM
Sbjct: 712 KIGRIEEAEHLIGEM 726
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 193/436 (44%), Gaps = 63/436 (14%)
Query: 67 NPYHALFFFNW-ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFF 125
+P AL FF A P + HT + A+ +L + N +KL
Sbjct: 65 DPATALAFFECVARRPG-----FRHTAASHAALLQLLARRRAPA-------NYDKL---- 108
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS---YNSLLGVLVRVNSIKLAEEFFH 182
+ +I G +V+ A+ +++ + S YN L L+R + + + +
Sbjct: 109 VLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYS 168
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF------------------------- 217
+V+E ++P D TY TMI YCK G + A + F
Sbjct: 169 HLVQEGLLP-DTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRT 227
Query: 218 -------------DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
+M + N +Y +I G C+ + EA + M++ GC N TY
Sbjct: 228 SDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTY 287
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+I GLC GR+ +A+ L+ +M L G +V T+ +M+ G C G+ A+G ++ +ME
Sbjct: 288 TLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALG-IKALME 346
Query: 325 AN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
N NPD +Y +I G C GK DEA LL ARG PTV +F + + +D
Sbjct: 347 QNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A+ + M +C + +Y +I + + K R+++ ++ ++ M +G + Y+ +
Sbjct: 406 DALRVKSNMISSNCKLDLQAYGVLI-NVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSI 464
Query: 444 LKGYCEEGNVENVMQI 459
+ GYC+ G V +++
Sbjct: 465 IDGYCKVGMVGAALEV 480
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 144/277 (51%), Gaps = 5/277 (1%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y +R + M E K++ + + P+ + YNTMI +CKKG L A + +
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G + + T NA++ G C + +A L+ M L G + N ++ +++GLC
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ + ++ + ++ +Y ++I G CK G+ +A LL EM RG+ P+V+++NA+
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
++G + A+ + M Q C P+ +YN++I GLC G++ + E+L++ I G
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC--GGKLDEAEELLNGAIARGF 384
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
++ L+ GYC+ +++ +++ M++ +L
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKL 421
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 148/314 (47%), Gaps = 21/314 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y SL+ + + A ++V E D+ TY+ +++ CK + A + D
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGC-KADLYTYSVLLQALCKQKKLNEALSILDQ 655
Query: 220 MTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MTV K N++AY +I+ K+G+ + AK NEM++ G +P+ TY I C GR
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGR 715
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EA+ L+ +M +G +V T+ + G +G D+A L+ +++A+ P+ +Y +
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWL 775
Query: 337 VINGFCKIG----------------KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
++ F K+ + + LL+ M GL PTV +++++ +
Sbjct: 776 LLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKAT 835
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
L+ A +LL M D PN Y +I C K + V + D MI G Y
Sbjct: 836 RLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTD-MIEFGFQPQLESY 894
Query: 441 SCLLKGYCEEGNVE 454
L+ G C+EG+ +
Sbjct: 895 HYLIVGLCDEGDYD 908
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 22/268 (8%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
+Y + ++ I+ AE ++ ++ V P DV TY I G MG I+ A K+
Sbjct: 702 TYTVFISSYCKIGRIEEAEHLIGEMERDGVTP-DVVTYNIFINGCGHMGYIDRAFSTLKR 760
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKG----------------ELEEAKKCMNEMMNRGCRP 259
+ D + +PN Y ++ F K EL + + MM G P
Sbjct: 761 MVDA-SCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNP 819
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+TY+++I G C R++EA +L+ M N + ++K C + F +AV ++
Sbjct: 820 TVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFV 879
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+++E P ++SY +I G C G D A SL ++ ++ + L++
Sbjct: 880 TDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKA 939
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTI 407
G +D LL M C + SY+ +
Sbjct: 940 GHVDFCSQLLAAMDNRHCRIDSESYSML 967
>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 481
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 217/432 (50%), Gaps = 33/432 (7%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V++ N HAL FF W N + H + I ++L S ++ A +L
Sbjct: 14 LVYNVLHGAKNAEHALQFFRWVERSNL----FEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 117 NSNKL-----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
+ K D ++ +I +YG G V+ ++ F + +++ + SY++L V+ R
Sbjct: 70 DMPKKGLEWDEDMWVL-MIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVISRR 128
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+++ +F+++V E + P T+ +I G+ G +E A + F+ + + P+++
Sbjct: 129 GRYMMSKRYFNKMVNEG-IEPTRHTFNVLIWGFFLSGKVETANRFFEDLKSREITPDVVT 187
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
YNTMING+ + ++EEA+K EM + P +TY +I G RVD+A L+ +M+
Sbjct: 188 YNTMINGYTRVKKMEEAEKYFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDALRLVEEMK 247
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV-VINGFCKIGKS 347
G K N T+ ++L GLC K +A L+ +++ + P S + +I+ CK G
Sbjct: 248 GLGIKPNAITYSTLLPGLCDAEKMSEARSLLKEMVDKYIAPKDNSIFIRLISSQCKAGNL 307
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCL--PNF 401
D A +LK M ++ ++ + + +L+EN G+ D+A+ L ++ + D + P
Sbjct: 308 DAAADVLKAM----IRLSIPTEAGHYGVLIENYCKAGKYDQAVKLFDKLIEKDIILRPQS 363
Query: 402 V------SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+YN +I LC G+ E LV ++++ G D + L++G+ +EG+ ++
Sbjct: 364 TLHMEPSAYNPLIEYLC-NNGQTGKAETLVRQLMKLGVQ-DSISLNTLIRGHSQEGSPDS 421
Query: 456 VMQIAHEMVTKK 467
+I M+ +K
Sbjct: 422 AFEILKIMLRRK 433
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ L AE Q++K V D + T+IRG+ + G ++A ++ +
Sbjct: 371 AYNPLIEYLCNNGQTGKAETLVRQLMKLGV--QDSISLNTLIRGHSQEGSPDSAFEILKI 428
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
M V AY++++ + K+ E +AK ++ M+ P+ + +++
Sbjct: 429 MLRRKVDSEKSAYDSLVQSYLKRNEPADAKAALDXMIENDHLPDSSLFRSVM 480
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 178/346 (51%), Gaps = 7/346 (2%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
++DF S+L+ A I+ + Q + + L + N LL R + + LA F
Sbjct: 81 IADF--SRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+++K P + T+ +++ G+C+ + +A +FD M KPN++ YNT+I+G C
Sbjct: 139 LGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K +++ A +N M G P+ +TYN++I GLC +GR +A +++ M +V
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T +++ G+ +A + ++ +++PD+ +Y ++I G C + DEA + M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
++G P V +++ + ++ +++ + L +M Q + N V+Y +I G C A G+
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA-GK 376
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ E++ RM+ G + + Y+ LL G C+ G +E + I +M
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 179/349 (51%), Gaps = 9/349 (2%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAY--GDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
+S ++K ++ S L+ + GDR V A++ F Q + + YN+++
Sbjct: 136 LSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR--VYDALYMFDQMVGMGYKPNVVIYNTII 193
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---V 222
L + + A + +++ K+ + PDV TY ++I G C G +A ++ MT +
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGI-GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P++ +N +I+ K+G + EA++ EM+ R P+ +TY+ +IYGLC+ R+DEA+
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
+ M G +V T+ ++ G C K + + + + + + +Y ++I G+C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ GK + A + + M G+ P + ++N + L +NG++++A+++L M + + V
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+YN II G+C A G + D D+ + G D Y+ ++ G ++G
Sbjct: 433 TYNIIIRGMCKA-GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 138/246 (56%), Gaps = 4/246 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++N+L+ V+ + AEEF+ ++++ ++ PD+ TY+ +I G C ++ A+++F
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSL-DPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P+++ Y+ +ING+CK ++E K EM RG N +TY +I G C
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+++ A+ + +M G N+ T+ +L GLC GK ++A+ L ++ + M+ D+ +Y
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I G CK G+ +A + + +GL P ++++ + L + G A L ++M +
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Query: 395 MDCLPN 400
LPN
Sbjct: 495 DGILPN 500
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 149/290 (51%), Gaps = 6/290 (2%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
FFH + + P ++ ++ ++ KM + +++ M + NL N ++N F
Sbjct: 69 FFHMVQCRPL--PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C+ +L A + +M+ G P+ +T+ +++ G C RV +A + +M G+K NV
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
+ +++ GLC + D A+ L + + + PDV +Y +I+G C G+ +A ++
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M R + P VF+FNA+ V+ G + A ++M + P+ V+Y+ +I GLCM
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS- 305
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R+ + E++ M+ G D YS L+ GYC+ VE+ M++ EM +
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+++ +L + + K+D + + + ++ + +++N FC+ + A+S L
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
+M G +P++ +F ++ + A+ + QM M PN V YNTII GLC +
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
K ++ + DL++RM + G D Y+ L+ G C G + ++ M ++
Sbjct: 200 K-QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 82/169 (48%), Gaps = 1/169 (0%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N S ++ ML+ K D ++ ++++ P + + +++ K+ K D I L
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
++M+ G+ + + N + +L A+ L +M ++ P+ V++ +++ G C
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R+ D + D+M+ G+ + +Y+ ++ G C+ V+N + + + M
Sbjct: 165 D-RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 4/136 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+ Y G + A F + + +YN LL L I+ A + K N
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK-N 425
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ D+ TY +IRG CK G + +A ++ + + P++ Y TM+ G KKG EA
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485
Query: 246 KKCMNEMMNRGCRPNE 261
+M G PNE
Sbjct: 486 DALFRKMKEDGILPNE 501
>gi|115445813|ref|NP_001046686.1| Os02g0321000 [Oryza sativa Japonica Group]
gi|113536217|dbj|BAF08600.1| Os02g0321000 [Oryza sativa Japonica Group]
Length = 542
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 155/303 (51%), Gaps = 2/303 (0%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ L A + F +++ V P + S+ +I+ + + + A ++
Sbjct: 101 YNTLVNALAEAGREGEALKAFDEMLASGVAP-NASSQNILIKMHARRSEFDLAWELIHKS 159
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
V+P++ Y+T+I G C+ G++ EA ++ M+ + CRP TY ++ C +GR+ EA
Sbjct: 160 GVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEA 219
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
K+LMA+M G NV T+ +++ LC KFD+ L + P +Y + +NG
Sbjct: 220 KLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNG 279
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CK GK+ EA+ LL M GL+PT ++++ + L + L AI LL++ ++
Sbjct: 280 LCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAG 339
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+YNT++ LC G+ + + L+ MI+ G + ++ L++ C G +
Sbjct: 340 VVAYNTVMSSLC-EMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLI 398
Query: 461 HEM 463
H +
Sbjct: 399 HSL 401
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 121/236 (51%), Gaps = 4/236 (1%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN+L YNT++N + G EA K +EM+ G PN + N +I ++ R E +
Sbjct: 96 PNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIK---MHARRSEFDLA 152
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +G + +V T+ +++ GLC GK +A G L ++E N P V++Y ++ +C+
Sbjct: 153 WELIHKSGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCR 212
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+ EA L+ EM G P V ++N + R L ++ + D +L + D P+ V+
Sbjct: 213 DGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVT 272
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
YN + GLC KG+ ++ +L+D M+ G +S LL C + + + +
Sbjct: 273 YNIYMNGLC-KKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYL 327
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 128/323 (39%), Gaps = 74/323 (22%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S N L+ + R + LA E H+ + V PDV TY+T+I G C+ G I A V D
Sbjct: 135 SQNILIKMHARRSEFDLAWELIHK----SGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDW 190
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY------- 269
M K P + Y ++ +C+ G + EAK M EM GC PN +TYN +I
Sbjct: 191 MLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDK 250
Query: 270 ----------------------------GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
GLC G+ EA L+ M G + T
Sbjct: 251 FDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSI 310
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L LC + A+ L E V +Y V++ C++GK + LL +M +G
Sbjct: 311 LLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKG 370
Query: 362 LKPTVFSFNAVFRILV--------------------------------ENGELDRAILLL 389
++P +FN + R L +G+L A L+
Sbjct: 371 IEPNTRTFNILIRSLCVGGKSSLAKSLIHSLGFAANVVTYNILLHWFYYHGKLTEANRLI 430
Query: 390 KQMPQMDCLPNFVSYNTIICGLC 412
M + + P+ V+Y II GLC
Sbjct: 431 SVMEEKNIAPDEVTYTIIIDGLC 453
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 27/297 (9%)
Query: 229 YNTMINGFCKKGELEEA-------KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
YN + G+L+E K+ + + G PN L YN ++ L GR EA
Sbjct: 59 YNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEAL 118
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+M +G N S+ ++K +FD A + ++ + PDV +Y +I G
Sbjct: 119 KAFDEMLASGVAPNASSQNILIKMHARRSEFDLA---WELIHKSGVEPDVGTYSTLIAGL 175
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C+ GK EA +L M + +P V ++ + + +G + A LL+ +M ++ CLPN
Sbjct: 176 CRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNV 235
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF----TMYSCLLKGYCEEGNVENVM 457
V+YN +I LC D D V++++ D+ Y+ + G C++G + +
Sbjct: 236 VTYNVLIRALC-----DDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEAL 290
Query: 458 QIAHEMVTKK--------GRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVV 506
++ M+ + LL +R++DA+ L+ T W + V + V+
Sbjct: 291 ELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVM 347
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 42/280 (15%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +++AY G + A + +++ + +YN L+ L + E+ +
Sbjct: 204 TPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESST 263
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPN------------------ 225
++ P V TY + G CK G + A ++ DVM ++P
Sbjct: 264 KDWKPSTV-TYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLL 322
Query: 226 -----------------LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
++AYNT+++ C+ G+ K + +M+ +G PN T+N +I
Sbjct: 323 DAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILI 382
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
LC+ G+ AK L+ + GF NV T+ +L GK +A + + E N+
Sbjct: 383 RSLCVGGKSSLAKSLIHSL---GFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIA 439
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
PD +Y ++I+G C+ K D A + + GL V +
Sbjct: 440 PDEVTYTIIIDGLCRERKFDAATACFLKSLTSGLSMDVLT 479
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
AI+ ++ +++ A + +YN+++ L + + + ++K+ + P+ T+ +I
Sbjct: 324 AIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGI-EPNTRTFNILI 382
Query: 202 RGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
R C G AK + + N++ YN +++ F G+L EA + ++ M + P+E
Sbjct: 383 RSLCVGGKSSLAKSLIHSLGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDE 442
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+TY +I GLC + D A K +G +V T +L L K + +
Sbjct: 443 VTYTIIIDGLCRERKFDAATACFLKSLTSGLSMDVLT--VLLNRLVYADK----IWEINR 496
Query: 322 VMEA-NMNPDVKSYEVVINGFCKIG 345
+ + + PD +++ I FC++G
Sbjct: 497 IFDGKDFVPDHHVFDLTIRTFCRVG 521
>gi|414865591|tpg|DAA44148.1| TPA: hypothetical protein ZEAMMB73_616668 [Zea mays]
Length = 838
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 190/399 (47%), Gaps = 58/399 (14%)
Query: 125 FISKLIKAYGDRGNVKA-AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ K+I+A+ +G+ F A ++ G+ + YN +L L+ ++ A +
Sbjct: 349 LLKKIIEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYNVILDGLINHGEVEAAYQLLSS 408
Query: 184 IVKENV------------------VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---V 222
+V+ + V P+ ++ ++ G CK+ ++ A + M
Sbjct: 409 MVRGDQRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGC 468
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG------------ 270
K LL +N +I C G+L+EA + N+M + G +P+E TYN+++YG
Sbjct: 469 KGKLLMFNDLILELCNSGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAAD 528
Query: 271 -----------------------LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
LC++GR+ EA + M GF ++ T+ + + G+C
Sbjct: 529 LLREMRANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMNGMC 588
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
VG + A+G ++ PDV ++ ++INGF K GK DEA +++EM ++G+ P+V
Sbjct: 589 KVGDIENALGLFLDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGMLPSVV 648
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++N + I ++G +D+AI + +M + P V+Y +++ GLC A GR + L +
Sbjct: 649 TYNLMIDIWCKSGSIDKAITCVYKMIDEEKPPTVVTYTSLLDGLCNA-GRPDEAIVLWCK 707
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M G + + Y+ L+ G C+ G +E + EM TK
Sbjct: 708 MREKGCSPNGIAYTALVNGLCKCGRMETAVNYYEEMKTK 746
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 151/284 (53%), Gaps = 4/284 (1%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
K S+F + L+ R + AA + + + + + ++ L I A +
Sbjct: 504 KPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQLCLSGRITEALQ 563
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGF 236
F +++ +P D+ TY+ + G CK+G IENA +F ++ K P+++A+N +INGF
Sbjct: 564 FLDGMLELGFLP-DIVTYSAAMNGMCKVGDIENALGLFLDISSKCYLPDVVAHNILINGF 622
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G+ +EA++ M EM+++G P+ +TYN MI C +G +D+A + KM V
Sbjct: 623 RKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEEKPPTV 682
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ S+L GLC G+ D+A+ + E +P+ +Y ++NG CK G+ + A++ +E
Sbjct: 683 VTYTSLLDGLCNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGLCKCGRMETAVNYYEE 742
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
M+ +G +FS + +L+ G+ + LLK + Q D + N
Sbjct: 743 MKTKGFDLDIFSLLNLTNLLIAQGQASKGCELLKVVLQKDVVHN 786
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 214/506 (42%), Gaps = 58/506 (11%)
Query: 7 SLTNISQIPDQSILVTSITSVIQRLNPQ---NPSPKNISSQPLDQFSLCLGSNIVTK--- 60
S+ + + P L+ S + +P SP ++ LD+FS + +
Sbjct: 2 SIGRLGRAPASLFLLQSFATTTASSSPAATTTSSPGFLAHHLLDEFSRPRATRDAARLRR 61
Query: 61 ------------VIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHS-- 106
VI + HAL FF WA+ P + H+ A+ +L H
Sbjct: 62 LAAYLTPPAAESVILRLPSWRHALDFFRWAAE---QPG-FRHSCYSLNAMASLLPPHQRA 117
Query: 107 -LISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC-LYSYNSL 164
L +A L + ++ + L++ G G A F AK + A Y+YN L
Sbjct: 118 HLDRLATDALVSRCSMTPGALGFLLRRLGAAGLPDTAARVFDAAKTTLSCAPNSYTYNCL 177
Query: 165 LGVLVRVNSIKLAEEFFHQIV----KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
L L + + AE ++V E+V D T T++++ YC G E+A V M
Sbjct: 178 LDALAKAGRAEDAEARLQEMVVTCGDESV---DRYTLTSLLQCYCNAGRPEDASAVLQRM 234
Query: 221 TVKPNLLAY--NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ + + + +I + K G++E+A + + M RPNE T + +++GL GRVD
Sbjct: 235 SKRAWVDEHVLTMLIVAYSKWGKVEDAVELLGRMEALDMRPNEKTLSVLVHGLARQGRVD 294
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
A + KM GF +++ + +++GLC + +AV ++ + PDV+ + +I
Sbjct: 295 VAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDMKRDRITPDVRLLKKII 354
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKP--TVFSFNAVFRILVENGELDRAILLLKQMPQ-- 394
FC+ G + E A LKP V +N + L+ +GE++ A LL M +
Sbjct: 355 EAFCRQGDFSTVGPFINE-NAVHLKPGSAVLLYNVILDGLINHGEVEAAYQLLSSMVRGD 413
Query: 395 -----------------MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
D PN S+N ++CGLC K ++ L M+ G
Sbjct: 414 QRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVK-KLDLALALTKDMVGLGCKGKL 472
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
M++ L+ C G ++ +I ++M
Sbjct: 473 LMFNDLILELCNSGKLDEAYEIFNQM 498
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 210/457 (45%), Gaps = 26/457 (5%)
Query: 21 VTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNP-YHALFFFNWAS 79
++ ++ R+ P P+ S+ LD + + +V +V+ +N AL FF WA
Sbjct: 99 ISEAAKMVCRIVSTQPEPRIAST--LDALGVAMSPELVAEVLKNLSNAGMLALAFFRWAE 156
Query: 80 NPNP---NPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDR 136
+H+ I L SL+ ++ LS +++ Y
Sbjct: 157 RQEGFSYTAEGFHNLIEALGKIKQFKLVWSLVET----MRCRGLLSKDTFKLIVRRYARA 212
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
VK A+ F + L YN L+ L + +K A+ + ++ ++ PD+ T
Sbjct: 213 RKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKT 272
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
YT ++ G+ + K ++ M ++P+++AY +I+ FCK G+ +EA K EM
Sbjct: 273 YTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEME 332
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
GC P+ Y +I GL R+DEA + + +GF V T +++ C KF+
Sbjct: 333 ASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFE 392
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A + + E + P+ ++Y+V+++ K K +EA ++ + M G +P + ++ +
Sbjct: 393 HAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMV 452
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV----EDLVDRMI 429
+ NG +D A+ + KQM + LP ++ +I GLC + R+++ ++++D+ I
Sbjct: 453 GMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALINGLCF-ENRLEEACVYFQEMLDKGI 511
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R L +S L + E G + +A EM +K
Sbjct: 512 RPPGQL----FSNLKEALVEGGRI----SLAQEMASK 540
>gi|224140601|ref|XP_002323670.1| predicted protein [Populus trichocarpa]
gi|222868300|gb|EEF05431.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 158/288 (54%), Gaps = 7/288 (2%)
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
+++PN ++ M+ CKK + EAK+ +++MM +G PN T +I C G++
Sbjct: 171 SLEPNSWTFSIMVRCHCKKKDPGEAKRVLDQMMQKGFNPNVATLTILINSFCKMGQLQNT 230
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+ M G K N+ T+ +LKG+C VG+ D+A + ++ + + PD+ +Y +++G
Sbjct: 231 FQVFEVMDRIGCKPNIQTYNCLLKGMCYVGRIDEAFELMEDIKKTTVEPDIYTYTAMMDG 290
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
FCK+G+SDEA+ LL E GL P V +FN + + G + +LK M Q C+P+
Sbjct: 291 FCKVGRSDEAMELLNEAMEMGLAPNVVTFNTLLDGYAKEGRPLKGFGVLKLMKQRKCMPD 350
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN-VMQI 459
++SY+T++ GL + G++ + + M SG D + + L++G C + EN ++++
Sbjct: 351 YISYSTLLHGLLLW-GKVLAGLRIFNEMEGSGLEADERLMNSLVRGLCRKSIKENDLVEV 409
Query: 460 AHEMVTKKGRLLKLKNF-LTRVVDALLLMWIVTGGSWISRFVFVHQVV 506
A+E+ K +K + F + + AL++ + F+ +HQ+V
Sbjct: 410 AYEVFEK----MKKRGFVIEQSTYALVIQALWVAKKVDDAFINLHQMV 453
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 9/276 (3%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
P+V+T T +I +CKMG ++N +VF+VM KPN+ YN ++ G C G ++EA +
Sbjct: 209 PNVATLTILINSFCKMGQLQNTFQVFEVMDRIGCKPNIQTYNCLLKGMCYVGRIDEAFEL 268
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
M ++ P+ TY AM+ G C GR DEA L+ + G NV T ++L G
Sbjct: 269 MEDIKKTTVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPNVVTFNTLLDGYAK 328
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G+ + G L+ + + PD SY +++G GK + + EM GL+
Sbjct: 329 EGRPLKGFGVLKLMKQRKCMPDYISYSTLLHGLLLWGKVLAGLRIFNEMEGSGLEADERL 388
Query: 369 FNAVFRILV-----ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
N++ R L EN ++ A + ++M + + +Y +I L +AK ++ D
Sbjct: 389 MNSLVRGLCRKSIKENDLVEVAYEVFEKMKKRGFVIEQSTYALVIQALWVAK-KVDDAFI 447
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ +M+R G+ + +++ C G V+ +
Sbjct: 448 NLHQMVRLGYIPRLITINNVIQALCVGGKVDKAFYV 483
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 140/288 (48%), Gaps = 9/288 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI ++ G ++ F +I + +YN LL + V I A E I K+
Sbjct: 217 LINSFCKMGQLQNTFQVFEVMDRIGCKPNIQTYNCLLKGMCYVGRIDEAFELMEDI-KKT 275
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELEEA 245
V PD+ TYT M+ G+CK+G + A ++ + M + PN++ +NT+++G+ K+G +
Sbjct: 276 TVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPNVVTFNTLLDGYAKEGRPLKG 335
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M R C P+ ++Y+ +++GL + G+V + +M +G + + S+++G
Sbjct: 336 FGVLKLMKQRKCMPDYISYSTLLHGLLLWGKVLAGLRIFNEMEGSGLEADERLMNSLVRG 395
Query: 306 LCVVG-KFDQAVGYLRNVMEA----NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
LC K + V V E + +Y +VI K D+A L +M
Sbjct: 396 LCRKSIKENDLVEVAYEVFEKMKKRGFVIEQSTYALVIQALWVAKKVDDAFINLHQMVRL 455
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
G P + + N V + L G++D+A +L M + +P+ +SY+ +I
Sbjct: 456 GYIPRLITINNVIQALCVGGKVDKAFYVLVLMYENSKIPSRMSYDLLI 503
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 162/296 (54%), Gaps = 7/296 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN L+ L ++ A ++ +E P++ TY+T++ +C+ GM ++A+ +
Sbjct: 351 VHTYNILMHGLCKLGRCGSAVRMLDEM-EEKGCAPNIVTYSTLLHSFCRNGMWDDARAML 409
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M+ K N YN +I K G+L+EA + + EM ++GC+P+ TYN +IY LC N
Sbjct: 410 DQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNN 469
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKS 333
++DEA+ + + G N T+ +++ L G++ + + L N M + P DV S
Sbjct: 470 DQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGL-RLANEMVLHGCPLDVVS 528
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I CK G D ++ LL+EM +G+KP FS+N + L + G++ A+ L K+M
Sbjct: 529 YNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 588
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
P+ V+YNT+I GLC G +L++++ + D Y+ L+ +C+
Sbjct: 589 NQGLTPDIVTYNTLINGLCKV-GWTHAALNLLEKLPNENVHPDIVTYNILISWHCK 643
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 151/330 (45%), Gaps = 44/330 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y LL L R A ++ + NVV T+IRG G + A +++++
Sbjct: 287 TYGFLLRGLCRTRQADEAYAMLGRVPEVNVV-----MLNTVIRGCLAEGKLARATELYEM 341
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P++ YN +++G CK G A + ++EM +GC PN +TY+ +++ C NG
Sbjct: 342 MGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGM 401
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D+A+ ++ +M GF N + ++ L GK D+A+ ++ + PD+ +Y
Sbjct: 402 WDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNT 461
Query: 337 VINGFCKIGKSDEA-----------------------------------ISLLKEMRARG 361
+I C + DEA + L EM G
Sbjct: 462 IIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHG 521
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
V S+N + + L + G +DR+++LL++M PN SYN +I LC A G+++D
Sbjct: 522 CPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKA-GKVRDA 580
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+L M+ G D Y+ L+ G C+ G
Sbjct: 581 LELSKEMLNQGLTPDIVTYNTLINGLCKVG 610
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 125/252 (49%), Gaps = 4/252 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
YN ++ L + + A ++ K PD+ TY T+I C ++ A+ +F
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEM-KSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGN 481
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ V N + YNT+I+ G +E + NEM+ GC + ++YN +I LC G
Sbjct: 482 LLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGN 541
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD + ML+ +M G K N ++ ++ LC GK A+ + ++ + PD+ +Y
Sbjct: 542 VDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNT 601
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING CK+G + A++LL+++ + P + ++N + + LD A +LL +
Sbjct: 602 LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGG 661
Query: 397 CLPNFVSYNTII 408
+PN ++ ++
Sbjct: 662 IVPNERTWGMMV 673
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 126/293 (43%), Gaps = 8/293 (2%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMI 233
A Q+ + V P +Y ++ + +A ++ M V P +
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
C+ G +A + M GC P+ + Y +I+ L G V EA L+ +M L G
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+V+T ++ GLC +G +A + +M P V +Y ++ G C+ ++DEA ++
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
L R + V N V R + G+L RA L + M C P+ +YN ++ GLC
Sbjct: 308 L----GRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC- 362
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GR ++D M G + YS LL +C G ++ + +M K
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAK 415
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ L+ + +++V P DV +Y +I+ CK G ++ + + +
Sbjct: 493 TYNTLIHALLHSGRWQEGLRLANEMVLHGC-PLDVVSYNGLIKALCKEGNVDRSMMLLEE 551
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KPN +YN +IN CK G++ +A + EM+N+G P+ +TYN +I GLC G
Sbjct: 552 MMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGW 611
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
A L+ K+ ++ T+ ++ C V D A L + + P+ +++ +
Sbjct: 612 THAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGM 671
Query: 337 VINGFCK 343
++ F +
Sbjct: 672 MVQNFVR 678
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 181/382 (47%), Gaps = 42/382 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + L+K D + A+ Q + G C + SY +++ + + A
Sbjct: 163 FSYNILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGT 221
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+H+++ ++P +V TY+++I CK ++ A +V M V PN YN++++G+C
Sbjct: 222 YHEMLDRGILP-NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G+ +EA + +M + G P+ +TYN+++ LC NGR EA+ + M G K ++
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++L+G G + G L ++ ++P+ + ++I + K GK D+A+ + +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM---- 413
R +GL P ++ V IL ++G ++ A+ +QM P + YN++I LC+
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 414 ------------------------------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+GR+ + E L D M+R G D YS L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520
Query: 444 LKGYCEEGNVENVMQIAHEMVT 465
+ GYC G ++ ++ MV+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVS 542
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 156/307 (50%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS++ K A F ++ + V PDV TY +++ CK G A+K+FD
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT +KP + Y T++ G+ KG L E ++ M+ G PN ++ +I G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A ++ +KMR G + T+ +++ LC G+ + A+ Y +++ ++P Y
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ C K D+A L+ EM RG+ FN++ + G + + L M ++
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ ++Y+T+I G C+A G+M + L+ M+ G D Y+ L+ GYC+ +E+
Sbjct: 510 VKPDIITYSTLIDGYCLA-GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 457 MQIAHEM 463
+ + EM
Sbjct: 569 LVLFREM 575
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 148/281 (52%), Gaps = 6/281 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM-----TVKPNLLAYNTMINGFCKKGELEEAK 246
P+V +Y +++G C + A ++ +M P++++Y T+INGF K+G+L++A
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+EM++RG PN +TY+++I LC +D+A ++ M NG N T+ S++ G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+ +A+G+L+ + + PDV +Y +++ CK G+ EA + M RGLKP +
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++ + + G L LL M + PN ++ +IC +G++ +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA-KQGKVDQAMLVFS 398
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+M + G N D Y ++ C+ G VE+ M+ +M+ ++
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 182/372 (48%), Gaps = 8/372 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P Y Y ++ H L+ + +++N + + S LI AY +G V A
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPNHYVFSILICAYAKQGKVDQA 393
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + +Q +Y +++G+L + ++ A +F Q++ E + P ++ Y ++I
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI-VYNSLIH 452
Query: 203 GYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
C + AK++ M + + + +N++I+ CK+G + E++K + M+ G +P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TY+ +I G C+ G++DEA L+A M G K + T+ +++ G C + + + A+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
R + + ++PD+ +Y +++ G + ++ A L + G + + ++N + L +N
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
D A+ + + + D ++N +I G + GR + +DL + +G D
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMI-GALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 440 YSCLLKGYCEEG 451
YS + + E+G
Sbjct: 692 YSLMAENLIEQG 703
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 167/369 (45%), Gaps = 40/369 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++ Y G K AI + + + +YNSL+ L + A + F + K
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334
Query: 189 VVPPDVSTYTTMIRGYC-----------------------------------KMGMIENA 213
+ P+++TY T+++GY K G ++ A
Sbjct: 335 L-KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393
Query: 214 KKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
VF M + P+ + Y T+I CK G +E+A + +M++ P + YN++I+
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LCI + D+AK L+ +M G + S++ C G+ ++ ++ + PD
Sbjct: 454 LCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 513
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ +Y +I+G+C GK DEA LL M + G+KP ++N + + ++ A++L +
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M P+ ++YN I+ GL + R ++L + SG L+ + Y+ +L G C+
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTR-RTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 451 GNVENVMQI 459
+ +++
Sbjct: 633 NLTDEALRM 641
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 141/264 (53%), Gaps = 6/264 (2%)
Query: 150 KQIENGACLYS--YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ ++ G CL + +NS++ + + +E+ F +V+ V PD+ TY+T+I GYC
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV-KPDIITYSTLIDGYCLA 527
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G ++ A K+ M +KP+ + YNT+ING+CK +E+A EM + G P+ +TY
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N ++ GL R AK L + +G + +ST+ +L GLC D+A+ +N+
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 647
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
++ + +++ ++I K+G++DEA L + A GL P V +++ + L+E G L+
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707
Query: 385 AILLLKQMPQMDCLPNFVSYNTII 408
L M + C N N+I+
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIV 731
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 162/357 (45%), Gaps = 55/357 (15%)
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRGYCKMGMIEN 212
GA +Y N L + R +S A ++++ + V P++ TY +I C G ++
Sbjct: 51 GASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDL 109
Query: 213 A--------KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK-CMNEMMNRGCRPNELT 263
KK F V + +A+ ++ G C +A + M GC PN +
Sbjct: 110 GFAALGNVIKKGFRV-----DAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNG-----------------FKD------------ 294
YN ++ GLC R EA L+ M +G FK+
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 295 --------NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
NV T+ S++ LC D+A+ L ++++ + P+ ++Y +++G+C G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
EAI LK+M + G++P V ++N++ L +NG A + M + P +Y T
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ G KG + ++ L+D M+R+G + + ++S L+ Y ++G V+ M + +M
Sbjct: 345 LLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P++ +Y ++I C G+ D + L + +G + +F + + L + A+
Sbjct: 87 VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146
Query: 387 -LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL--DFTMYSCL 443
++L++M Q+ C+PN SYN ++ GLC + R Q+ +L+ M G + D Y+ +
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLC-DENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+ G+ +EG+++ HEM+ +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDR 228
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 4/214 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y ++ A+ F + + + +YN +L L + A+E + I E+
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT-ES 613
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
++STY ++ G CK + + A ++F + ++ +N MI K G +EA
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + G P+ TY+ M L G ++E L M NG N S+++
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
L G +A YL + E + + + + + ++
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 153/308 (49%), Gaps = 7/308 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK----K 215
+Y +L+ R+ +++A H +++ VP + + + MI K ++E A K
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANC-SFMIDELRKKELVEEAFSLACK 328
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ D+ V PN+ AYN +I+ CK ++A + EM RG PNE+TY +I+ LC G
Sbjct: 329 LGDLGMV-PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+++A L KMR G K V + S++ G C G D+A G L +++ + P SY
Sbjct: 388 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 447
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I G C+ G + L +EM RG+ ++F A+ ++ ++D A L +M
Sbjct: 448 PLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 507
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ +PN V++N +I G C+ G ++ L D+M+ G D Y L+ G C V
Sbjct: 508 NVIPNEVTFNVMIEGYCLV-GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566
Query: 456 VMQIAHEM 463
+ ++
Sbjct: 567 ANEFVADL 574
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 161/330 (48%), Gaps = 7/330 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN+L+ L + A+ F ++ + P +V TY +I CK GMIE+A +F
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV-TYAILIHALCKRGMIEDALCLF 396
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +K + YN++ING+CK+G L+ A+ ++ M+ G P +Y+ +I GLC N
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + L +M G N T +++ G C K D+A ++++N+ P+ ++
Sbjct: 457 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+I G+C +G +A L +M GLKP +++ ++ L + +A + +
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ N S ++ G +GR + L D M G LD ++ ++ ++ + E
Sbjct: 577 SYAVLNNFSLTALLYGF-FREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
+ EM K+ + F T ++DAL
Sbjct: 636 KSCVLFREM--KEQGVKPDDIFYTCMIDAL 663
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 170/340 (50%), Gaps = 5/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A RG ++ A+ F + + +Y YNSL+ + S+ A +VKE
Sbjct: 379 LIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG 438
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P ++Y+ +I G C+ G + + ++ M + N + +INGFCK +++EA
Sbjct: 439 LTPT-AASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++M++ PNE+T+N MI G C+ G + +A L +M G K + T++S++ G
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC+ +A ++ ++ + + S ++ GF + G+ E L EM RG+K
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 617
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ SF + ++ + +++ +L ++M + P+ + Y +I L + +Q + +
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL-NCW 676
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
D+M+ G++ + ++ L+ C+ G + + + EM+
Sbjct: 677 DQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 158/344 (45%), Gaps = 40/344 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+ + +L LV++ LA + F ++++ V D YT IR YC+ ++ A+ +
Sbjct: 164 YTASQILFSLVKIRQFALARDLFDKMLQSGV-HLDEYVYTAGIRAYCESRNLDGARGLVV 222
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC--- 272
M VK + + YN ++ G CK ++EA + N M+N G +E+TY ++YG C
Sbjct: 223 RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME 282
Query: 273 --------------------------------INGRVDEAKMLMAKMRLNGFKDNVSTHK 300
V+EA L K+ G NV +
Sbjct: 283 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ LC +FD A + + + P+ +Y ++I+ CK G ++A+ L +MR +
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+K TV+ +N++ + G LDRA LL M + P SY+ +I GLC G +
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC-RNGDLSS 461
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+L M G + ++ L+ G+C++ ++ ++ +M+
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGE 241
+KE V PD YT MI K + A +D M V PN + + +IN CK G
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L A+ EM+ PN+ TYN + G +++AK L + M L G ++ +
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNI 762
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++KGLC GK +A+ + + E+ +PD SY +I+ CK+G ++A L EM +G
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA------- 414
LKP V ++N R +GE D+A+ + M + PN+ +Y ++ G+ +
Sbjct: 823 LKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFSC 882
Query: 415 -KGRMQDVEDLVDRMIRSGHN 434
+G Q ++ V ++ S HN
Sbjct: 883 FRGTKQYIQISVYELMDSTHN 903
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 151/337 (44%), Gaps = 53/337 (15%)
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---V 222
G++VR+ S + VK + VP Y ++ G CK ++ A +V +VM V
Sbjct: 219 GLVVRMES---------EGVKASAVP-----YNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-------------------------- 256
+ + Y T++ GFC+ ELE A + ++M+ G
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324
Query: 257 --CR-------PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
C+ PN YNA+I LC N R D+A L +M G + N T+ ++ LC
Sbjct: 325 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G + A+ + + + V Y +ING+CK G D A LL M GL PT
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
S++ + L NG+L + L ++M + N ++ +I G C K +M + L D+
Sbjct: 445 SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDK-KMDEAARLFDK 503
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
MI S + ++ +++GYC GN+ Q+ +MV
Sbjct: 504 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 157/346 (45%), Gaps = 41/346 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++ +L+ + + A F +++ NV+P +V T+ MI GYC +G I A +++D
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYD 537
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M +KP+ Y ++I+G C + +A + + ++ N N + A++YG G
Sbjct: 538 QMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREG 597
Query: 276 RVDEAKMLMAKMRLNGFKDNVST-----------------------------------HK 300
R E L +M + G K ++ + +
Sbjct: 598 RFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYT 657
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
M+ L QA+ ++ +P+ ++ V+IN CK G A L KEM A
Sbjct: 658 CMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAG 717
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+ P F++N G++++A L M Q L + VS+N +I GLC A G++Q+
Sbjct: 718 NVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGH-LASIVSFNILIKGLCKA-GKIQE 775
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
DL+ ++ SG + D YS ++ C+ G++ ++ +EM+ K
Sbjct: 776 AIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+G N T +L L + +F A ++++ ++ D Y I +C+ D
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A L+ M + G+K + +N + L +N + A+ + M + + V+Y T++
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276
Query: 410 GLCMAKGRMQDVE---DLVDRMIRSG 432
G C RM+++E + MIR G
Sbjct: 277 GFC----RMEELEMALRITHDMIRLG 298
>gi|125539212|gb|EAY85607.1| hypothetical protein OsI_06979 [Oryza sativa Indica Group]
Length = 538
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 154/301 (51%), Gaps = 2/301 (0%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ L A + F +++ V P + S+ +I+ + + + A ++
Sbjct: 97 YNTLVNALAEAGREGEALKAFDEMLASGVAP-NASSQNILIKMHARRSEFDLAWELIHKS 155
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
V+P++ Y+T+I G C+ G++ EA ++ M+ + CRP TY ++ C +GR+ EA
Sbjct: 156 GVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEA 215
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
K+LMA+M G NV T+ +++ LC KFD+ L + P +Y + +NG
Sbjct: 216 KLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNG 275
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CK GK+ EA+ LL M GL+PT ++++ + L + L AI LL++ ++
Sbjct: 276 LCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAG 335
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+YNT++ LC G+ + + L+ MI+ G + ++ L++ C G +
Sbjct: 336 VVAYNTVMSSLC-EMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLI 394
Query: 461 H 461
H
Sbjct: 395 H 395
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 117/225 (52%), Gaps = 4/225 (1%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN+L YNT++N + G EA K +EM+ G PN + N +I ++ R E +
Sbjct: 92 PNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIK---MHARRSEFDLA 148
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +G + +V T+ +++ GLC GK +A G L ++E N P V++Y ++ +C+
Sbjct: 149 WELIHKSGVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCR 208
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+ EA L+ EM G P V ++N + R L ++ + D +L + D P+ V+
Sbjct: 209 DGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVT 268
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
YN + GLC KG+ ++ +L+D M+ G +S LL C
Sbjct: 269 YNIYMNGLC-KKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLC 312
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 128/323 (39%), Gaps = 74/323 (22%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S N L+ + R + LA E H+ + V PDV TY+T+I G C+ G + A V D
Sbjct: 131 SQNILIKMHARRSEFDLAWELIHK----SGVEPDVGTYSTLIAGLCRAGKVVEAWGVLDW 186
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY------- 269
M K P + Y ++ +C+ G + EAK M EM GC PN +TYN +I
Sbjct: 187 MLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDK 246
Query: 270 ----------------------------GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
GLC G+ EA L+ M G + T
Sbjct: 247 FDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSI 306
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L LC + A+ L E V +Y V++ C++GK + LL +M +G
Sbjct: 307 LLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKG 366
Query: 362 LKPTVFSFNAVFRILV--------------------------------ENGELDRAILLL 389
++P +FN + R L +G+L A L+
Sbjct: 367 IEPNTRTFNILIRSLCVGGKSSLAKSLIHSQGFAANVVTYNILLHWFYYHGKLTEANRLI 426
Query: 390 KQMPQMDCLPNFVSYNTIICGLC 412
M + + P+ V+Y II GLC
Sbjct: 427 SVMEEKNIAPDEVTYTIIIDGLC 449
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 133/297 (44%), Gaps = 27/297 (9%)
Query: 229 YNTMINGFCKKGELEEAKKCMNEMM-------NRGCRPNELTYNAMIYGLCINGRVDEAK 281
YN + G+++E +E+ + G PN L YN ++ L GR EA
Sbjct: 55 YNVAMKALALAGDVDEVVAVFSELKWTAADGGDGGAPPNVLCYNTLVNALAEAGREGEAL 114
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+M +G N S+ ++K +FD A + ++ + PDV +Y +I G
Sbjct: 115 KAFDEMLASGVAPNASSQNILIKMHARRSEFDLA---WELIHKSGVEPDVGTYSTLIAGL 171
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C+ GK EA +L M + +P V ++ + + +G + A LL+ +M ++ CLPN
Sbjct: 172 CRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNV 231
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF----TMYSCLLKGYCEEGNVENVM 457
V+YN +I LC D D V++++ D+ Y+ + G C++G + +
Sbjct: 232 VTYNVLIRALC-----DDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEAL 286
Query: 458 QIAHEMVTKK--------GRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVV 506
++ M+ + LL +R++DA+ L+ T W + V + V+
Sbjct: 287 ELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVM 343
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 118/280 (42%), Gaps = 42/280 (15%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +++AY G + A + +++ + +YN L+ L + E+ +
Sbjct: 200 TPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESST 259
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPN------------------ 225
++ P V TY + G CK G + A ++ DVM ++P
Sbjct: 260 KDWKPSTV-TYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLL 318
Query: 226 -----------------LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
++AYNT+++ C+ G+ K + +M+ +G PN T+N +I
Sbjct: 319 DAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILI 378
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
LC+ G+ AK L+ GF NV T+ +L GK +A + + E N+
Sbjct: 379 RSLCVGGKSSLAKSLIHS---QGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIA 435
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
PD +Y ++I+G C+ K D A + + GL V +
Sbjct: 436 PDEVTYTIIIDGLCRERKFDAATACFLKSLTSGLSMDVLT 475
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 95/205 (46%), Gaps = 8/205 (3%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
AI+ ++ +++ A + +YN+++ L + + + ++K+ + P+ T+ +I
Sbjct: 320 AIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGI-EPNTRTFNILI 378
Query: 202 RGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
R C G AK + N++ YN +++ F G+L EA + ++ M + P+E
Sbjct: 379 RSLCVGGKSSLAKSLIHSQGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDE 438
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+TY +I GLC + D A K +G +V T +L L K + +
Sbjct: 439 VTYTIIIDGLCRERKFDAATACFLKSLTSGLSMDVLT--VLLNRLVYADK----IWEINR 492
Query: 322 VMEA-NMNPDVKSYEVVINGFCKIG 345
+ + + PD +++ I FC+ G
Sbjct: 493 IFDGKDFVPDHHVFDLTIRTFCRAG 517
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 169/352 (48%), Gaps = 11/352 (3%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLA 177
L F + LI Y NV AA F + N CL SY +L+ + A
Sbjct: 237 LDTFTYTSLILGYCRNKNVDAANAIF---LSMPNKGCLRNEVSYTNLIHGFCEARRVDEA 293
Query: 178 EEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMIN 234
+ F Q+ ++N P V TYT +I C++G A +F MT K PN+ Y +I
Sbjct: 294 LKLFSQMHEDNCWPT-VRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLIC 352
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
C+ ++AKK +N M+ +G P+ +TYNA+I G C G A +++ M N
Sbjct: 353 SLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSP 412
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N T+ ++ G C +A+ L ++E + P+V +Y ++I+G CK G A LL
Sbjct: 413 NARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLL 472
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
M GL P ++++ L + G ++ A L + + + N V Y+T+I G C
Sbjct: 473 SLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKV 532
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G++ D L+D+M+ +G + Y+ L+ GYC+E N + + M+ +
Sbjct: 533 -GKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKR 583
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 172/367 (46%), Gaps = 38/367 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI + + V A+ F Q + + +Y ++ L ++ A F ++ +
Sbjct: 278 TNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTE 337
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
++ P+V TYT +I C+ ++AKK+ + M K P+++ YN +I+G+CKKG
Sbjct: 338 KHC-QPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSA 396
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + ++ M + C PN TYN +I G C + +A L+ KM + NV T+ ++
Sbjct: 397 SALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILI 456
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C G A L + E+ + PD +Y V I+ CK G +EA SL + ++ +G+K
Sbjct: 457 HGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIK 516
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK----GRM- 418
++ + + G++ LL +M C+PN ++YN++I G C K R+
Sbjct: 517 ANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLL 576
Query: 419 ------QDVE-----------------------DLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+D+E D+ D+M+ +G + D +Y+ + YC
Sbjct: 577 VDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCS 636
Query: 450 EGNVENV 456
G +++
Sbjct: 637 HGRLKDA 643
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 223/501 (44%), Gaps = 53/501 (10%)
Query: 5 RRSLTNISQIPDQSILV-----TSITSVIQRLNPQ-NPSPKNISSQPLDQFSLCLGSNIV 58
R T+ + +P QS V + S++ R N Q +PS KN+ + + +
Sbjct: 30 HRFFTSPASLP-QSFSVEHDIPAQLFSILSRPNWQKHPSLKNLIPS--------IAPSHI 80
Query: 59 TKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASL---- 114
+ + +P AL FFNW + + H + ++ ++L+ + + IA ++
Sbjct: 81 SALFALNLDPQTALAFFNWIGQKH----GFKHNVQSHVSMLNILVPNGYLRIAENMRILM 136
Query: 115 ----------------LKNSNKLSDFFISKL-IKAYGDRGNVKAAIFWFHQAKQIENGAC 157
L++ N+ D F KL ++ Y + + + K +
Sbjct: 137 IKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEML 196
Query: 158 -------LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+++ N+++ ++ ++ AE + +IV+ + D TYT++I GYC+ +
Sbjct: 197 DDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGL-SLDTFTYTSLILGYCRNKNV 255
Query: 211 ENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A +F M K N ++Y +I+GFC+ ++EA K ++M C P TY +
Sbjct: 256 DAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVI 315
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I+ LC GR EA + +M + NV T+ ++ LC FD A L ++E +
Sbjct: 316 IFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGL 375
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P V +Y +I+G+CK G S A+ +L M + P ++N + + +A+
Sbjct: 376 IPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMS 435
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LL +M + PN V+YN +I G C +G + L+ M SG D YS +
Sbjct: 436 LLHKMLERKLQPNVVTYNILIHGQC-KEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTL 494
Query: 448 CEEGNVENVMQIAHEMVTKKG 468
C+ G VE + E + +KG
Sbjct: 495 CKRGLVEEARSL-FESLKEKG 514
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 12/328 (3%)
Query: 146 FHQAKQIENG-------ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
F AK+I NG + +YN+L+ + A E +++ N P+ TY
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEIL-SLMESNNCSPNARTYN 418
Query: 199 TMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
+I G+C+ I A + M ++PN++ YN +I+G CK+G+L A K ++ M
Sbjct: 419 ELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNES 478
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G P+E TY+ I LC G V+EA+ L ++ G K N + +++ G C VGK
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDG 538
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
L ++ A P+ +Y +I+G+CK EA L+ M R ++P ++ +
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDN 598
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L+++ E D+A + QM P+ Y I C + GR++D E L+ +M G
Sbjct: 599 LLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYC-SHGRLKDAEVLICKMNAKGIMP 657
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D +Y+ + Y G+++ I M
Sbjct: 658 DTMLYTLFIDAYGRFGSIDGAFGILKRM 685
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 161/318 (50%), Gaps = 4/318 (1%)
Query: 103 LSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYN 162
LS S + I + + N+ + ++LI + N+ A+ H+ + + + +YN
Sbjct: 394 LSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYN 453
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT- 221
L+ + + A + ++ E+ + PD TY+ I CK G++E A+ +F+ +
Sbjct: 454 ILIHGQCKEGDLGSAYKLL-SLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKE 512
Query: 222 --VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+K N + Y+T+I+G+CK G++ + + +++M++ GC PN +TYN++I G C E
Sbjct: 513 KGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKE 572
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A++L+ M + T+ ++ L +FDQA ++ +PDV Y I+
Sbjct: 573 ARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIH 632
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
+C G+ +A L+ +M A+G+ P + G +D A +LK+M ++ C P
Sbjct: 633 AYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEP 692
Query: 400 NFVSYNTIICGLCMAKGR 417
++ +Y+ +I L AK +
Sbjct: 693 SYYTYSCLIKHLSNAKPK 710
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 156/396 (39%), Gaps = 44/396 (11%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ D L L+ A SL ++ K ++ S LI Y G V F
Sbjct: 487 YSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLL---D 543
Query: 151 QIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
++ + C+ +YNSL+ + + K A ++K ++ P TYT +I K
Sbjct: 544 KMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDI-EPAADTYTILIDNLLKD 602
Query: 208 GMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
+ A +FD M P++ Y I+ +C G L++A+ + +M +G P+ + Y
Sbjct: 603 DEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLY 662
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG-------------- 310
I G +D A ++ +M G + + T+ ++K L
Sbjct: 663 TLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLS 722
Query: 311 ---------------KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
++ + + E P+ +Y I G CK+G + A L
Sbjct: 723 SGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFD 782
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
M+ +G P +N++ + G AI L M + LP+ S ++CGL +
Sbjct: 783 HMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGL-YDE 841
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
G + + + ++ +N D ++ L+ G ++G
Sbjct: 842 GNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKG 877
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 112/283 (39%), Gaps = 16/283 (5%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNK---LSDFFISKL-IKAYGDRGNVKAAIFWFHQAK 150
YTA SH + A L+ N + D + L I AYG G++ A +
Sbjct: 627 YTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMH 686
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
++ Y+Y+ L+ L +++ + V D S +
Sbjct: 687 EVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVD-------Y 739
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
E +F M PN Y I G CK G LE A + + M +G PNE YN++
Sbjct: 740 EFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSL 799
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ C G EA + M N ++ + K +L GL G ++A + ++
Sbjct: 800 LGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEY 859
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG--LKPTVFS 368
N D ++V+I+G K G SD+ L M +G + P +S
Sbjct: 860 NYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYS 902
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y + L +V +++A F + KE P+ Y +++ C++G+ A + D+
Sbjct: 760 TYGKFITGLCKVGCLEVAHRLFDHM-KEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDI 818
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P+L + ++ G +G E+AK+ + +E+ + +I GL G
Sbjct: 819 MIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGL 878
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
D+ L M G + + T+ +++G + + D
Sbjct: 879 SDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 205/450 (45%), Gaps = 41/450 (9%)
Query: 53 LGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAA 112
L + + K++ + +P AL F+ AS + H ++D L + I
Sbjct: 8 LSARQLFKLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVE 67
Query: 113 SLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN-GACLYSYNSLLGVLVRV 171
+ K ++ + ++KAY A+ F + ++I + SYN+LL +
Sbjct: 68 LIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEA 127
Query: 172 NSIKLAEEFFHQIVKENVVP----------------------------------PDVSTY 197
N ++ AE F ++P PDV +Y
Sbjct: 128 NLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSY 187
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
T+I G K G + +A +VFD M + P+++ YN MI+GF K+G+ + K+ ++
Sbjct: 188 GTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVK 247
Query: 255 RGC-RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
C PN +TYN MI GLC GR DE+ + +M+ N + ++ T+ S++ GLC VG D
Sbjct: 248 GSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVD 307
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
AV + +++ ++ DV +Y ++NGFC+ GK E+ L M V S+N
Sbjct: 308 GAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFI 366
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
R L EN +++ AI + + + + + +Y +I GLC G + ++ G
Sbjct: 367 RGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLC-KNGHLNKALKILKEAKDGGD 425
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
LD YS ++ G ++G V+ + I H+M
Sbjct: 426 KLDAFAYSSIVDGLSKQGRVDEALGIVHQM 455
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 184/379 (48%), Gaps = 43/379 (11%)
Query: 116 KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK 175
KN ++ F S LI D GNV A+ + + + + +YN+LL R IK
Sbjct: 283 KNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIK 342
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTM 232
+ E + + KEN +V +Y IRG + +E A V++++ + + Y +
Sbjct: 343 ESFELWVMMGKENC--HNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVL 400
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR---- 288
I+G CK G L +A K + E + G + + Y++++ GL GRVDEA ++ +M
Sbjct: 401 IHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGC 460
Query: 289 ----------LNGF---------------------KDNVSTHKSMLKGLCVVGKFDQAVG 317
+NGF V ++ +++ GLC +F A
Sbjct: 461 ELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYS 520
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
+++ ++E + PD+ +Y ++++G C+ K D A++L +++ +GL+P V N + L
Sbjct: 521 FVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLC 580
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR-MIRSGHNLD 436
G+++ A+LL M Q +CLPN V++NT++ GL K R ++ ++ M ++G D
Sbjct: 581 SAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGL--YKARECEMASVIWACMFKNGFQPD 638
Query: 437 FTMYSCLLKGYCEEGNVEN 455
Y+ LKG C G + +
Sbjct: 639 IISYNITLKGLCSCGRISD 657
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 172/329 (52%), Gaps = 4/329 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G ++ + + K+ E L++Y+SL+ L V ++ A E + ++VK +VV V T
Sbjct: 269 GRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVD-VVT 327
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
Y ++ G+C+ G I+ + +++ +M + N+++YN I G + ++EEA +
Sbjct: 328 YNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRR 387
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
RG + TY +I+GLC NG +++A ++ + + G K + + S++ GL G+ D+
Sbjct: 388 RGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDE 447
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+G + + + +INGF + K +EAI +EM +G PTV S+N +
Sbjct: 448 ALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLIN 507
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L + A +K+M + D P+ ++Y+ ++ GLC K ++ +L +++ G
Sbjct: 508 GLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGK-KIDMALNLWRQVLVKGLE 566
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D TM++ L+ G C G +E+ + + M
Sbjct: 567 PDVTMHNILMHGLCSAGKIEDALLLYSNM 595
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 142/296 (47%), Gaps = 8/296 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNS----NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y + L + ++ A +LK + +KL F S ++ +G V A+ HQ
Sbjct: 397 YGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMD 456
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + N L+ VR + ++ A FF ++ + P VS Y T+I G CK
Sbjct: 457 KYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVS-YNTLINGLCKAERF 515
Query: 211 ENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+A M KP+++ Y+ +++G C+ +++ A +++ +G P+ +N +
Sbjct: 516 SDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNIL 575
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
++GLC G++++A +L + M+ + N+ TH +++ GL + + A + +
Sbjct: 576 MHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGF 635
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
PD+ SY + + G C G+ + I+L + G+ PT ++ + R +++ G LD
Sbjct: 636 QPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLD 691
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G++ A+ +AK + ++Y+S++ L + + A HQ+ K
Sbjct: 400 LIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYG 459
Query: 189 V-VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEE 244
+ P V +I G+ + +E A F M K P +++YNT+ING CK +
Sbjct: 460 CELSPHVCN--PLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSD 517
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + EM+ + +P+ +TY+ ++ GLC ++D A L ++ + G + +V+ H ++
Sbjct: 518 AYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMH 577
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC GK + A+ N+ ++N P++ ++ +++G K + + A + M G +P
Sbjct: 578 GLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQP 637
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+ S+N + L G + I L + LP +++ ++
Sbjct: 638 DIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILV 681
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 120/238 (50%), Gaps = 3/238 (1%)
Query: 231 TMINGFCKKGELEEAKKCMNEMMN-RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
T++ + K EA C +M GC+P +YNA++ +++A+ +A
Sbjct: 83 TVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFET 142
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G N+ T+ ++K +F +A G L + ++ PDV SY VING K G
Sbjct: 143 VGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVS 202
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL-PNFVSYNTII 408
A+ + EM RGL P V +N + + G+ + + +++ + C+ PN V+YN +I
Sbjct: 203 ALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMI 262
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GLC GR + ++ +RM ++ +D YS L+ G C+ GNV+ +++ EMV +
Sbjct: 263 NGLC-KMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKR 319
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 190/388 (48%), Gaps = 21/388 (5%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDF----FISKLIKAYGDRGNVKAAIFWFHQAK 150
YT++ L IS A L KL + LIK GN+ A+ HQ
Sbjct: 164 YTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLAL-KLHQ-- 220
Query: 151 QIENGAC---------LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
++ NG ++SYN ++ L ++ K A+ F+++V + V PDV T++ +I
Sbjct: 221 EMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGV-RPDVVTFSALI 279
Query: 202 RGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
CK GM+ AKK + M ++ P+L + ++I GFC G+L+ AK+ M ++G
Sbjct: 280 DTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYE 339
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P+ ++Y +IYG C V+EA L +M G ++ T +LKGL + GK A
Sbjct: 340 PDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKL 399
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
V + ++ V ++G CK G EA+ L E+++ +K + SFN + L +
Sbjct: 400 FGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCK 459
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
+L+ A L +++ Q P+ V+Y +I G C G++ + L M +G +
Sbjct: 460 ARKLETAWELFEKLSQEGLQPDVVTYCIMINGFC-KNGQVDNANILFQMMEENGCTPNLL 518
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTK 466
YS LL G+ + +E V+++ H+M+ K
Sbjct: 519 TYSALLHGFYKNNKLEEVVKLLHKMIQK 546
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 170/353 (48%), Gaps = 47/353 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y SL+ L + I A F ++ K P +V TY T+I+G C+ G I A K+
Sbjct: 163 TYTSLIKGLCMEHRISEATRLFIRMQKLGCWP-NVVTYGTLIKGLCRTGNINLALKLHQE 221
Query: 220 M---------TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
M KPN+ +YN +I+ CK G+ +EAK+ NEM+++G RP+ +T++A+I
Sbjct: 222 MLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDT 281
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC G V EAK + M L G ++ T S+++G C+VG D A ++ PD
Sbjct: 282 LCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPD 341
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV------------- 377
V SY V+I G+CK +EA+ L EM G P + +F + + L
Sbjct: 342 VISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFG 401
Query: 378 ----------------------ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+NG L A+ L ++ + + S+N +I GLC A+
Sbjct: 402 VVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKAR 461
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+++ +L +++ + G D Y ++ G+C+ G V+N I +M+ + G
Sbjct: 462 -KLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNA-NILFQMMEENG 512
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 164/334 (49%), Gaps = 21/334 (6%)
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP---PDVSTYTTMIRGYCKMG 208
+++G ++ +N G + +++ + I+ N++ + Y+ + Y KM
Sbjct: 59 LQHGLPMFIHNCKKGNITSTQALQFFDLMMRSIISFNLLLGALAKIKHYSQVFSLYKKM- 117
Query: 209 MIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
+ + PN N +IN C + E M +M RG P+ +TY ++I
Sbjct: 118 ---------HLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLI 168
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA--- 325
GLC+ R+ EA L +M+ G NV T+ +++KGLC G + A+ + ++
Sbjct: 169 KGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSP 228
Query: 326 ---NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
N P++ SY ++I+ CKIGK EA L EM +G++P V +F+A+ L + G +
Sbjct: 229 YAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMV 288
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
A L+ M +P+ ++ ++I G C+ G + ++L M G+ D Y+
Sbjct: 289 IEAKKFLETMMLRGIVPDLFTFTSLIEGFCLV-GDLDSAKELFLSMPSKGYEPDVISYTV 347
Query: 443 LLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
L+ GYC+ NVE M++ +EM+ + G+ +K F
Sbjct: 348 LIYGYCKTFNVEEAMKLYNEML-RVGKWPDMKTF 380
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 117/230 (50%), Gaps = 4/230 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y NV+ A+ +++ ++ + ++ LL L + A++ F +VK +
Sbjct: 348 LIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLF-GVVKPH 406
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
VP ++ + + G CK G + A ++F+ + +K ++ ++N +I+G CK +LE A
Sbjct: 407 AVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETA 466
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ G +P+ +TY MI G C NG+VD A +L M NG N+ T+ ++L G
Sbjct: 467 WELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHG 526
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
K ++ V L +++ +++ Y +V + K K E + +L+
Sbjct: 527 FYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQ 576
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 145/267 (54%), Gaps = 9/267 (3%)
Query: 205 CKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMN--EMMNRGCRP 259
C+ G I A++V+ M + P+ + YN M+NGF K G + K C + E+M R
Sbjct: 1 CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRI---KNCFDLWELMGREGSR 57
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N ++N M+ GL NG VDE + M+ +GF ++ +T+ ++ G C G ++++ L
Sbjct: 58 NVASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVL 117
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ D +Y +I+G CK+GK D+A+S+L M G KP +NA+ L+
Sbjct: 118 EIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGA 177
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
+ + AI + K++ C P V+YNT+I GLC + R + DLV M+ G N
Sbjct: 178 SKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGE-RFAEAYDLVKEMLEKGWNPSVIT 236
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTK 466
YS L+KG C++ VE +Q+ +++++K
Sbjct: 237 YSLLIKGLCQDHKVEMALQLWNQVISK 263
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 148/287 (51%), Gaps = 4/287 (1%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKK 239
+++KE+ D +TY ++ G+CK G + V ++ + L AY+ MI+G CK
Sbjct: 83 ELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAYSAMISGLCKM 142
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G+L++A +N M+ GC+PN YNA+I GL + ++A + ++ + T+
Sbjct: 143 GKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTY 202
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ GLC +F +A ++ ++E NP V +Y ++I G C+ K + A+ L ++ +
Sbjct: 203 NTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVIS 262
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G KP V N + L G+ + A L M +C PN V+YNT++ G G +
Sbjct: 263 KGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGF-YKGGDTR 321
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + R++R+G D Y+ LKG C + + ++ VTK
Sbjct: 322 NALVIWARILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAVTK 368
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 150/293 (51%), Gaps = 4/293 (1%)
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP--NLLAYN 230
+I AE + ++ E+ + PD Y M+ G+ K G I+N ++++M + N+ ++N
Sbjct: 5 AINAAERVYKEMA-ESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSRNVASFN 63
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
TM+ G GE++E M G + TY +++G C NG +++ ++ +
Sbjct: 64 TMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQE 123
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G + + +M+ GLC +GK D+AV L ++E+ P+ + Y +ING K ++A
Sbjct: 124 GGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDA 183
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
I + KE+ R PT+ ++N + L + A L+K+M + P+ ++Y+ +I G
Sbjct: 184 IRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKG 243
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
LC +++ L +++I G D M++ L+ G C G E+ ++ +M
Sbjct: 244 LCQDH-KVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDM 295
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 130/259 (50%), Gaps = 6/259 (2%)
Query: 149 AKQIENGAC-LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
AKQ E GA ++Y++++ L ++ + A + ++ E+ P+ Y +I G
Sbjct: 120 AKQ-EGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMI-ESGCKPNTQVYNALINGLLGA 177
Query: 208 GMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
E+A +VF + + P ++ YNT+ING CK EA + EM+ +G P+ +TY
Sbjct: 178 SKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITY 237
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+ +I GLC + +V+ A L ++ GFK +V H ++ GLC VGK + A ++
Sbjct: 238 SLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNH 297
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
N P++ +Y ++ GF K G + A+ + + GL P + S+N + L +
Sbjct: 298 WNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISV 357
Query: 385 AILLLKQMPQMDCLPNFVS 403
AIL L + +P ++
Sbjct: 358 AILFLNDAVTKNIVPTVIT 376
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 184/367 (50%), Gaps = 15/367 (4%)
Query: 107 LISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE-NGACLYSY 161
L+ +A+LL ++ ++ + +KL+ + RG V + F + Q ++S+
Sbjct: 26 LLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSF 85
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
N ++ + RV ++ A E ++ E PD T+ ++ G C+ + +V +
Sbjct: 86 NVVIKGVCRVGQVQKALELVERM-NEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQ 144
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
PN++ + ++I+G+CK G+LE+A N+M+ G PN +TYN +I G G +
Sbjct: 145 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDL 204
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A + +M +V T S++ G C G+ D A+ ++ + + P+V ++ ++
Sbjct: 205 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 264
Query: 338 INGFCKIGKSDEAISLLKEMRAR-GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
I+ CK +SDEAI LL E+ R + P F +N V +L + G++D A L+ K M +
Sbjct: 265 IHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 324
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG---NV 453
C P+ +Y +I G CM K R+ + M+ +G + D +C + + G V
Sbjct: 325 CRPDKYTYTILIIGYCM-KSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEV 383
Query: 454 ENVMQIA 460
++VM++A
Sbjct: 384 DHVMRLA 390
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 155/311 (49%), Gaps = 6/311 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN L+ L+ + F + +++ V PDV ++ +I+G C++G ++ A ++ +
Sbjct: 47 YAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVE 106
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLCIN 274
M P+ + +N +++G C+ E+ + + + G C PN +T+ ++I G C
Sbjct: 107 RMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKA 166
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++++A + M +G N T+ ++ G VG AV + + PDV ++
Sbjct: 167 GKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTF 226
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP- 393
+I+G+C+ G+ D+A+ + +M ++P V++F+ + L + D AI LL ++
Sbjct: 227 SSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNL 286
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ D P YN +I LC G++ + + M G D Y+ L+ GYC + +
Sbjct: 287 RPDIAPQAFIYNPVIDVLCKC-GKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRI 345
Query: 454 ENVMQIAHEMV 464
+ HEMV
Sbjct: 346 SEAIMFFHEMV 356
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 201/424 (47%), Gaps = 18/424 (4%)
Query: 53 LGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAA 112
L +V V+ Q + AL FF WA +Y H Y + D+L L A
Sbjct: 162 LNPRLVCAVLRSQDDERIALDFFYWADRQW----RYRHDAIVYYTMLDILSKTRLCQGAR 217
Query: 113 SLLK----NSNKLSDFFISKLIKAYGDRGNVKAA--IFWFHQAKQIENGACLYSYNSLLG 166
+L+ + S S ++ +Y G ++ A I Q +E L N+ +
Sbjct: 218 RILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPD--LSICNTAIY 275
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
VLV+ N ++ A F ++ K + PD+ +Y +I+GYC + I++A ++ M K
Sbjct: 276 VLVKGNKLEKALRFLERM-KVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCP 334
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMM-NRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P+ ++Y T++ CK ++EE K+ M M+ N P+++TYN +IY L +G D+A +
Sbjct: 335 PDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALV 394
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
+ + GF + + +++ C D+A + ++ NPDV +Y +I+GFC
Sbjct: 395 FLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFC 454
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
++GK DEA +L++M G KP ++ + L NG+ A ++ + PN +
Sbjct: 455 RVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAI 514
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+Y+ ++ GL +G++ + DL MI G + + L++ C NV + E
Sbjct: 515 TYSAVMHGL-RREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEE 573
Query: 463 MVTK 466
+ K
Sbjct: 574 CLHK 577
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 176/362 (48%), Gaps = 8/362 (2%)
Query: 113 SLLKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRV 171
++++NSN + D + LI A G+ A+ + +A++ Y++++ +
Sbjct: 362 NMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKN 421
Query: 172 NSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLA 228
+I A+ + + PDV TYT +I G+C++G I+ AKK+ M KPN +
Sbjct: 422 KNIDKAKSLVIDMYSKGC-NPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVT 480
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y ++NG C G+ EA++ +N PN +TY+A+++GL G++ EA L +M
Sbjct: 481 YTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMI 540
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
GF N +++ LC A YL + +V ++ VI GFC+IG D
Sbjct: 541 EKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLD 600
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
A+S+L++M P ++ +F L + LD A L+ +M P V+Y +I
Sbjct: 601 AALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVI 660
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
C GR+ D+ L+++MI T+Y+ +++ C GN E ++ +++
Sbjct: 661 HRFCQW-GRVDDMMKLLEKMI--ARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTAS 717
Query: 469 RL 470
+L
Sbjct: 718 KL 719
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 165/351 (47%), Gaps = 49/351 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA------ 213
SY +++ L + ++ + +V+ + + PD TY T+I K G ++A
Sbjct: 339 SYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLRE 398
Query: 214 --KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+K F + V Y+ +++ FCK +++AK + +M ++GC P+ +TY A+I G
Sbjct: 399 AEEKGFHIDKV-----GYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGF 453
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G++DEAK ++ +M +G K N T+ +L GLC GK +A + E P+
Sbjct: 454 CRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNA 513
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN------------ 379
+Y V++G + GK EA L +EM +G P N + + L N
Sbjct: 514 ITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEE 573
Query: 380 -----------------------GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
G+LD A+ +L+ M + P+ ++Y T+ L K
Sbjct: 574 CLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDAL-GKKS 632
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
R+ + +L+ +M+ G + Y ++ +C+ G V+++M++ +M+ ++
Sbjct: 633 RLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ 683
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLL 227
V + K EE H+ NVV +T++I G+C++G ++ A + + M + P+ +
Sbjct: 565 VGAKKYLEECLHKGCAVNVV-----NFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAI 619
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
Y T+ + KK L+EA + + +M+ +G P +TY A+I+ C GRVD+ L+ KM
Sbjct: 620 TYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKM 679
Query: 288 -RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
FK + + +++ LC G ++A L V+ D K+ ++I + G
Sbjct: 680 IARQPFK---TVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGN 736
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ A + +M R L P + V + LV +G
Sbjct: 737 ALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDG 770
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 5/175 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKC 248
PD TYTT+ K ++ A ++ M + P + Y +I+ FC+ G +++ K
Sbjct: 616 PDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKL 675
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +M+ R +P + YN +I LC G +EA+ L+ K+ K + T +++ +
Sbjct: 676 LEKMIAR--QPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLI 733
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G A + N+ PD+K E V G EA L+ RG++
Sbjct: 734 DGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERGIQ 788
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 147/277 (53%), Gaps = 4/277 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PD T+TT+I G A + D M +PNL+ Y ++NG CK+G+++ A
Sbjct: 112 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 171
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+N+M + + +N +I LC VD+A L +M G + NV T+ S++ LC
Sbjct: 172 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 231
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G++ A L +++E +NP++ ++ +I+ F K GK EA L +M R + P +F+
Sbjct: 232 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 291
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N++ + LD+A + + M DC P+ +YNT+I G C +K R++D +L M
Sbjct: 292 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK-RVEDGTELFREM 350
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
G D Y+ L++G +G+ +N ++ +MV+
Sbjct: 351 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 138/254 (54%), Gaps = 4/254 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++N+L+ V+ AE+ ++K ++ PD+ TY ++I G+C ++ AK++F
Sbjct: 254 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI-DPDIFTYNSLINGFCMHDRLDKAKQMF 312
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K P+L YNT+I GFCK +E+ + EM +RG + +TY +I GL +
Sbjct: 313 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 372
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A+ + +M +G ++ T+ +L GLC GK ++A+ + ++ + D+ Y
Sbjct: 373 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 432
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G CK GK D+ L + +G+KP V ++N + L L A LLK+M +
Sbjct: 433 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 492
Query: 395 MDCLPNFVSYNTII 408
LP+ +YNT+I
Sbjct: 493 DGPLPDSGTYNTLI 506
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 158/307 (51%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L A + ++ E + P++ T+ +I + K G A+K+ D
Sbjct: 221 TYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 279
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ P++ YN++INGFC L++AK+ M+++ C P+ TYN +I G C + R
Sbjct: 280 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 339
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L +M G + T+ ++++GL G D A + ++ + PD+ +Y +
Sbjct: 340 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 399
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G C GK ++A+ + M+ +K ++ + + + + G++D L +
Sbjct: 400 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 459
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V+YNT+I GLC +K +Q+ L+ +M G D Y+ L++ + +G+
Sbjct: 460 VKPNVVTYNTMISGLC-SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 518
Query: 457 MQIAHEM 463
++ EM
Sbjct: 519 AELIREM 525
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 157/301 (52%), Gaps = 5/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y ++ L + I LA +++ + + DV + T+I CK +++A +F
Sbjct: 149 LVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++PN++ Y+++I+ C G +A + +++M+ + PN +T+NA+I
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+ EA+ L M ++ T+ S++ G C+ + D+A ++ + PD+ +Y
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 327
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I GFCK + ++ L +EM RGL ++ + + L +G+ D A + KQM
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ ++Y+ ++ GLC G+++ ++ D M +S LD +Y+ +++G C+ G V+
Sbjct: 388 DGVPPDIMTYSILLDGLC-NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 446
Query: 455 N 455
+
Sbjct: 447 D 447
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 131/244 (53%), Gaps = 1/244 (0%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P+++ ++++NG+C + +A +++M+ G RP+ +T+ +I+GL ++ + EA
Sbjct: 76 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L+ +M G + N+ T+ ++ GLC G D A L + A + DV + +I+ C
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K D+A++L KEM +G++P V +++++ L G A LL M + PN V
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
++N +I + +G+ + E L D MI+ + D Y+ L+ G+C ++ Q+
Sbjct: 256 TFNALIDAF-VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 314
Query: 463 MVTK 466
MV+K
Sbjct: 315 MVSK 318
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 5/233 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN+L+ + ++ E F ++ +V D TYTT+I+G G +NA+KVF
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQKVF 382
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V P+++ Y+ +++G C G+LE+A + + M + + Y MI G+C
Sbjct: 383 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 442
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+VD+ L + L G K NV T+ +M+ GLC +A L+ + E PD +Y
Sbjct: 443 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 502
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L++EMR+ + V +L +G LD++ L
Sbjct: 503 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKSFL 554
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 80/159 (50%), Gaps = 3/159 (1%)
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL--LKEMRARGLKPTVFS 368
K D A+G ++++ P + + +++ K+ K D ISL L +M G +P++ +
Sbjct: 22 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+++ + A+ L+ QM +M P+ +++ T+I GL + + V LVDRM
Sbjct: 82 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA-LVDRM 140
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
++ G + Y ++ G C+ G+++ + ++M K
Sbjct: 141 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 179
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 201/423 (47%), Gaps = 32/423 (7%)
Query: 68 PYH---ALFFFNWA-SNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLS- 122
P H AL F NW P + H T + T +L+ L A S+LK+ +++
Sbjct: 22 PVHGRLALKFLNWVIQQPGL---ELRHLTHMLSITTHILVRARLYENAKSILKHLSQMGV 78
Query: 123 -----------DFFISK--------LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNS 163
+ + K LI+ Y G V A+ F +Y+ N
Sbjct: 79 GSKSVFGALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNM 138
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK 223
LLG LV+ + FF +++ V PDVST+ +I C G ++ A + M
Sbjct: 139 LLGKLVKERKVGAVWLFFKEMLARRVC-PDVSTFNILINVLCVEGKLKKAGYLLKKMEES 197
Query: 224 ---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
P+++ YNT++N +CKKG + A + +++M ++G + TYN ++ LC N R +
Sbjct: 198 GYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKG 257
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+L+ KMR N T+ S++ G GK A + + N+ P+ +Y +I+G
Sbjct: 258 YLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDG 317
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
C G ++A+++L+ M A G KP S++A+ L + + + + +L++M +
Sbjct: 318 HCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVG 377
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
++Y +I GLC G + + L+D+M++ G D +S L+ G+C G ++NV +I
Sbjct: 378 CIAYTAMIDGLC-RNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEII 436
Query: 461 HEM 463
+M
Sbjct: 437 CKM 439
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 168/337 (49%), Gaps = 9/337 (2%)
Query: 133 YGDRGNVKAAIFWFHQ--AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVV 190
Y +G KAA+ Q +K IE AC +YN L+ L + N ++ K +
Sbjct: 213 YCKKGRYKAALELIDQMGSKGIEADAC--TYNMLVDDLCKNNRSAKGYLLLKKMRKRMIS 270
Query: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKK 247
P ++ TY ++I G+ K G I A ++F M+ + PN + YN +I+G C G E+A
Sbjct: 271 PNEI-TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALT 329
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ M G +PNE++Y+A++ GLC + + + +K ++ +MR+NG + +M+ GLC
Sbjct: 330 ILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLC 389
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G +++V L +++ + PDV ++ V+INGFC++GK ++ +M GL P
Sbjct: 390 RNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSI 449
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+ + + G++ A + M ++ N N ++ LC G++ E
Sbjct: 450 IYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLC-KDGKVGVAEYFFHH 508
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M + G+ + + C++ GY GN + EM+
Sbjct: 509 MSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMI 545
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 162/360 (45%), Gaps = 6/360 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + GN + A+ + SY++LL L R +L++ ++
Sbjct: 314 LIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNG 373
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
++ ++ YT MI G C+ G++ + K+ D M V P+++ ++ +INGFC+ G+++
Sbjct: 374 MIVGCIA-YTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNV 432
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K+ + +M G PN + Y +IY C G V EA + M G+ N ++
Sbjct: 433 KEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSS 492
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC GK A + ++ + P+ +++ +ING+ G +A S+ EM G P+
Sbjct: 493 LCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPS 552
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
F++ + + L G+ A LL ++ + + V+YNTI+ G + D L
Sbjct: 553 HFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVE-TFKSGMLTDAVALF 611
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALL 485
D M++ D Y+ + G G + + ++ KG + K T VD L
Sbjct: 612 DEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLG-KGAVSPEKVMYTTFVDGLF 670
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 166/344 (48%), Gaps = 12/344 (3%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFH 182
F+ L +A G KAA+++ ++ NG C L + N +L R+ + A + F
Sbjct: 665 FVDGLFRA----GQSKAALYFCEDMEK--NGLCADLIATNVILNGYSRMGKMAKAGDIFT 718
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
+ + P ++TY ++ GY K + ++++M + P+ L +++I GFCK
Sbjct: 719 MMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKS 778
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
L+ K + +M+ G ++ T+N +I C V +A L+ M L +++TH
Sbjct: 779 AMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTH 838
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S++ L V ++ L ++E PD + Y ++N C++G A L EM A
Sbjct: 839 DSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEA 898
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G+ + +A+ R L + G+++ A L+L M + +P ++ T++ C + ++
Sbjct: 899 LGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVE 958
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ L D M LD Y+ L+ G C +G+V + +++ E+
Sbjct: 959 ALK-LKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEI 1001
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 125/252 (49%), Gaps = 9/252 (3%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
V D T+ +I YC+ + A + ++M + P++ ++++I+ + ++E+
Sbjct: 796 VAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESH 855
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
++EM+ RGC P+ Y A++ +C G + A L +M G ++++GL
Sbjct: 856 LLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGL 915
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
GK ++A L ++ ++ P + ++ +++ FC+ EA+ L M +K V
Sbjct: 916 AKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDV 975
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG-----LCMAKGRMQDV 421
++N + L +G++ A+ L K++ Q PN +Y +I + +AKG + +
Sbjct: 976 IAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVL-L 1034
Query: 422 EDLVDRMIRSGH 433
+DL +R + SGH
Sbjct: 1035 KDLQERGVISGH 1046
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 148/377 (39%), Gaps = 46/377 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I YG+ GN A F + + + ++Y LL L R K A+ ++ +
Sbjct: 524 IINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL---H 580
Query: 189 VVPP--DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+P D TY T++ K GM+ +A +FD M V P+ Y + G ++G++
Sbjct: 581 YIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMV 640
Query: 244 EAKKCMNEMMNRGC-RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
A ++ +G P ++ Y + GL G+ A M NG ++ +
Sbjct: 641 AALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVI 700
Query: 303 LKGLCVVGKFDQAV------------------------GYLRN------------VMEAN 326
L G +GK +A GY + +M
Sbjct: 701 LNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTG 760
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PD + +I GFCK D + LLK+M G+ +FN + E E+ +A
Sbjct: 761 IFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAF 820
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L+ M D P+ ++++II L +Q+ L+ M+ G D Y L+
Sbjct: 821 DLVNIMNLFDIFPDMTTHDSIISVLSRVS-TVQESHLLLHEMLERGCIPDRRQYIALVNR 879
Query: 447 YCEEGNVENVMQIAHEM 463
C G++ ++ EM
Sbjct: 880 MCRMGHIHGAFKLKDEM 896
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 87/169 (51%), Gaps = 5/169 (2%)
Query: 300 KSMLKGLCVVGKFDQAV-GYLRNVME-ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
KS+LK L +G ++V G L N NP V ++++I + + G +A+ + M
Sbjct: 67 KSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSV--FDLLIRVYLREGMVGDALETFRLM 124
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
RG P+V++ N + LV+ ++ L K+M P+ ++N +I LC+ +G+
Sbjct: 125 GIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCV-EGK 183
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ L+ +M SG+ Y+ +L YC++G + +++ +M +K
Sbjct: 184 LKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSK 232
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 222/495 (44%), Gaps = 18/495 (3%)
Query: 40 NISSQPLDQFSLCLGSNI---------VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHH 90
++ SQ + +CLG+N + ++ E+ P A FN + P +
Sbjct: 50 SMDSQIQSRCLVCLGNNSCRTVRSRTKLMNILIEKGKPQEAQLIFNSLTEEGHRPTLITY 109
Query: 91 TTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
TT A+T S+ S+ + L KN K F + +I A+ + GNVK A+ F + K
Sbjct: 110 TT-LLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMK 168
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
++N+L+ + + + +E V P+ T+ ++IR +C I
Sbjct: 169 DRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRI 228
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A V M ++P+++ YNT+ + + GE A+ + EM N PNE T +
Sbjct: 229 TEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGII 288
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C G++ +A + +MR G N+ S++KG + D L + E +
Sbjct: 289 INGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGV 348
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PDV ++ ++N + +G D+ + +M G++P + +F+ + + V GE ++A
Sbjct: 349 KPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAES 408
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LL M + PN V + TII G C A G+M+ + ++M G + + L+ GY
Sbjct: 409 LLTAMGKSGVQPNVVIFTTIISGWCSA-GKMEYASRVYEKMCEMGICPNLKTFETLIWGY 467
Query: 448 CEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVV 507
E + ++ +++ +KG + +K+ + V DA + + I V +
Sbjct: 468 GEAKEPQKAEELL-QIMEQKG-VAPVKSTIQLVADAWHALGLANEAKRIKN--DVEEAPK 523
Query: 508 IMERTVEDGKRSECL 522
+M T ED +E L
Sbjct: 524 VMISTKEDDVAAESL 538
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 165/336 (49%), Gaps = 7/336 (2%)
Query: 115 LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSI 174
L NS S+ I +G + A+ F + ++ + ++YN L+ L + +
Sbjct: 83 LLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQL 142
Query: 175 KLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNT 231
++ ++ + P V TYTT+I G+C G ++ A + D M + PN + Y
Sbjct: 143 EMGVSLMDEM-QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTA 201
Query: 232 MINGFCKKGELEEAKKCMNEMMNRG--CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+I G C GE+E A + EM RG C PN +TY +I+GLC G + + +M +
Sbjct: 202 LIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMII 261
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+G N +T+ +++ GLC G F +A L ++ DV Y +I+G CK+G+ D
Sbjct: 262 SGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDF 321
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A + M +G+ P VF++ ++ + L + G LD A+ L+++M +PN V+Y T+I
Sbjct: 322 AREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLIN 381
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
G A R LV+ M +G +Y L K
Sbjct: 382 GFTQAD-RTDHALQLVNEMKSNGLMPAGDIYKILFK 416
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 131/244 (53%), Gaps = 3/244 (1%)
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
++++Y+ ING CKKG++ EA + EM +G P+ TYN +I GLC + +++ LM
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M+ GF V T+ +++ G C G+ D A+ L + + P+ +Y +I G C
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209
Query: 345 GKSDEAISLLKEMRARGLK--PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
G+ + AI +LKEM+ RG + P V ++ + L + G + + L +M C PN
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+Y +I GLC KG + L++ M+ G LD +Y+ L+ G C+ G ++ ++
Sbjct: 270 TYTALIHGLCQ-KGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQIL 328
Query: 463 MVTK 466
MV K
Sbjct: 329 MVEK 332
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 131/254 (51%), Gaps = 4/254 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI-V 185
+ LI + G V AA+ + + +Y +L+ L ++ A ++ +
Sbjct: 165 TTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKL 224
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
+ N P+V TYT +I G C+ G+ E + D M + PN Y +I+G C+KG
Sbjct: 225 RGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSF 284
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA +NEM+ GC + + YN++I GLC G +D A+ + M G +V T+ S+
Sbjct: 285 LEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSL 344
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
++GLC G D+A+G ++ + + P+ +Y +INGF + ++D A+ L+ EM++ GL
Sbjct: 345 IQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGL 404
Query: 363 KPTVFSFNAVFRIL 376
P + +F+ L
Sbjct: 405 MPAGDIYKILFKSL 418
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 177/376 (47%), Gaps = 40/376 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+ Y N+ A+ + ++ SY +++ L + LA + ++
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P+V Y+T+I GY G IE A+++ D M+ V P++ YN +I+ K G++EEA
Sbjct: 181 L-KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN---------- 295
+ E+ RG +P+ +T+ A I G G++ EA +M +G N
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299
Query: 296 -------------------------VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
V T + + GL G+ +A+ + E + PD
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 359
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V +Y +I+GFCK G+ ++A L EM +G+ P +F +NA+ L ++G++ RA L
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
MP+ P+ V+Y+T+I G C ++ + + L M G +Y+ L+ G C+E
Sbjct: 420 GMPEKGLEPDSVTYSTMIDGYCKSE-NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 478
Query: 451 GNVENVMQIAHEMVTK 466
G++E M + EM+ K
Sbjct: 479 GDMEKAMNLFREMLQK 494
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 184/401 (45%), Gaps = 35/401 (8%)
Query: 94 CYTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQA 149
CY AI L + A++ L K I Y G + A +F +
Sbjct: 222 CYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDE- 280
Query: 150 KQIENGACLYSYNSLLGVLV----RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+++G L N L VL+ + ++ A F + V+P DV T + I G
Sbjct: 281 -MLDHG--LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLP-DVQTCSAFIHGLL 336
Query: 206 KMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
K G ++ A KVF + K P++ Y+++I+GFCK+GE+E+A + +EM +G PN
Sbjct: 337 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 396
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
YNA++ GLC +G + A+ L M G + + T+ +M+ G C +A +
Sbjct: 397 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 456
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ P Y +++G CK G ++A++L +EM +G T SFN + ++ ++
Sbjct: 457 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKI 515
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD-----------------VEDLV 425
A L ++M +P+ V+Y T+I C A G+M++ V L
Sbjct: 516 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA-GKMEEANLLFKEMQERNLIVDTVFALF 574
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++M+ G D Y ++ +C+E N+ ++ E+V K
Sbjct: 575 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 615
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 169/355 (47%), Gaps = 27/355 (7%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
FI L+K G V+ A+ F + K+ +++Y+SL+ + ++ A E ++
Sbjct: 331 FIHGLLK----NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM 386
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+ + P ++ Y ++ G CK G I+ A+K+FD M K P+ + Y+TMI+G+CK
Sbjct: 387 CLKGIAP-NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 445
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ EA +EM ++G +P+ YNA+++G C G +++A L +M GF +S + +
Sbjct: 446 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN-T 504
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR--- 358
++ G C K +A + ++ + PD +Y VI+ CK GK +EA L KEM+
Sbjct: 505 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 564
Query: 359 --------------ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
A+G+KP ++ V + L A L ++ L +
Sbjct: 565 LIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIH 624
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ +I LC + + + L+D M G S L++ + E G ++ ++
Sbjct: 625 DLLITALC-KREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 678
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 148/304 (48%), Gaps = 5/304 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+Y + L R + A+ F ++ K + PD + + +I G+ + G I+ ++ D
Sbjct: 11 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGL-KPDYNACSALIDGFMREGDIDEVLRIKD 69
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
VM + NL+ YN +I+G CK G++E+A + + M+ GC+PN T+ +I G C
Sbjct: 70 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREH 129
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ A L+ +M + ++ +M+ GLC A L + + + P+V Y
Sbjct: 130 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 189
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I G+ G+ +EA LL M G+ P +F +NA+ L + G+++ A L ++
Sbjct: 190 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 249
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ V++ I G G+M + D M+ G + +Y+ L+ G+ + GN+
Sbjct: 250 GLKPDAVTFGAFILGYS-KTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 308
Query: 456 VMQI 459
+ I
Sbjct: 309 ALSI 312
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 137/282 (48%), Gaps = 6/282 (2%)
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
E + P+ TYT + G C+ + AK F+ M +KP+ A + +I+GF ++G+++
Sbjct: 3 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 62
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
E + + M++ G N +TYN +I+GLC G++++A ++ M G K N T ++
Sbjct: 63 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 122
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+G C +A+ L + + N+ P SY +ING C A LL++M GLK
Sbjct: 123 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 182
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-GRMQDVE 422
P V ++ + G ++ A LL M P+ YN II C++K G+M++
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS--CLSKAGKMEEAS 240
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ + G D + + GY + G + + EM+
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 156/355 (43%), Gaps = 60/355 (16%)
Query: 113 SLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC-LYSYNSLLGVLVR 170
S LK + D F S LI + +G V+ A F H ++ A ++ YN+L+ L +
Sbjct: 349 SELKEKGLVPDVFTYSSLISGFCKQGEVEKA-FELHDEMCLKGIAPNIFIYNALVDGLCK 407
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLL 227
I+ A + F + E + PD TY+TMI GYCK + A +F M V+P+
Sbjct: 408 SGDIQRARKLFDGM-PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 466
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YN +++G CK+G++E+A EM+ +G L++N +I G C + ++ EA L +M
Sbjct: 467 VYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEM 525
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM-----------------NPD 330
+ T+ +++ C GK ++A + + E N+ PD
Sbjct: 526 IAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPD 585
Query: 331 VKSYEVVINGFCK--------------IGKS---------------------DEAISLLK 355
+Y +VI CK +GK EA LL
Sbjct: 586 EVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLD 645
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
EM GLKP++ + + + R E G++D A + + + + +P+ + ++ G
Sbjct: 646 EMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 120/249 (48%), Gaps = 4/249 (1%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN Y + G C+ + EAK EM G +P+ +A+I G G +DE +
Sbjct: 8 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M G N+ T+ ++ GLC GK ++A L+ ++ P+ +++ ++I G+C+
Sbjct: 68 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
A+ LL EM R L P+ S+ A+ L +L A LL++M PN V
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 187
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+T+I G ++GR+++ L+D M SG D Y+ ++ + G +E E+
Sbjct: 188 YSTLIMGYA-SEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 246
Query: 464 VTKKGRLLK 472
+GR LK
Sbjct: 247 ---QGRGLK 252
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 3/213 (1%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M +G PN TY + GLC R++EAK+ +M+ G K + + +++ G G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 312 FDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
D+ + +++VM + P ++ +Y V+I+G CK GK ++A +LK M G KP +F
Sbjct: 61 IDEVL-RIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 119
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ + RA+ LL +M + + +P+ VSY +I GLC K + L+++M
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK-DLSLANKLLEKMTF 178
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
SG + +YS L+ GY EG +E ++ M
Sbjct: 179 SGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 211
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 22/254 (8%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + L+ G+++ A+ F + Q + A S+N+L+ + I+ A + F +
Sbjct: 466 FVYNALVHGCCKEGDMEKAMNLFREMLQ-KGFATTLSFNTLIDGYCKSCKIQEASQLFQE 524
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------------VK 223
++ + ++P V TYTT+I +CK G +E A +F M VK
Sbjct: 525 MIAKQIMPDHV-TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVK 583
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+ + Y +I CK+ L EA K +E++ +G ++ +I LC + EA L
Sbjct: 584 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 643
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +M G K +++ ++++ GK D+A V + PD + ++NG
Sbjct: 644 LDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLN 703
Query: 344 IGKSDEAISLLKEM 357
S++A +L+K++
Sbjct: 704 DTDSEDARNLIKQL 717
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 147/292 (50%), Gaps = 7/292 (2%)
Query: 182 HQIVKE---NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMING 235
H + +E N D+ TYT ++ K I+ A + + +T P + YN ++NG
Sbjct: 244 HSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNG 303
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
CK G LEEA + ++++ GC P+ +TY ++I GL R EA L +M G +
Sbjct: 304 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALD 363
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
+ ++++GL GK QA + + PDV + +I+G K G+ A+ + K
Sbjct: 364 TVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 423
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
M ARGL P ++A+ L + ++D A+ +L QM + C P+ ++YN +I GLC +
Sbjct: 424 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS- 482
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
G ++ D M+ +G D Y+ L+ G C+ GN + + +M + +
Sbjct: 483 GDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR 534
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 158/322 (49%), Gaps = 15/322 (4%)
Query: 149 AKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
A++ C +++Y +++ L + I+ A +I N P ++TY ++ G C
Sbjct: 247 AQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITA-NGCTPTIATYNALLNGLC 305
Query: 206 KMGMIENA----KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
KMG +E A +K+ D P+++ Y ++I+G K+ EA K EM +RG +
Sbjct: 306 KMGRLEEAIDLLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDT 364
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+ Y A+I GL G++ +A + M +G +V T +M+ GL G+ AV ++
Sbjct: 365 VCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKS 424
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+ + P+ Y +I+G CK K D A+ +L +M+ P ++N + L ++G+
Sbjct: 425 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 484
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
++ A +M + C P+ +YN +I GLC A G ++D M S +YS
Sbjct: 485 VEAARAFFDEMLEAGCKPDVYTYNILISGLCKA-GNTDAACGVLDDMSSSRF-----VYS 538
Query: 442 CLLKGYCEEGNVENVMQIAHEM 463
L+ G C+ G +E + HEM
Sbjct: 539 SLVDGLCKSGKLEGGCMLFHEM 560
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 161/344 (46%), Gaps = 40/344 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++ N+LL V R + A + + PDV T+ +I GYC E A V
Sbjct: 119 VHTGNALLDVFARTKRHREAGNLLKNELA-TIFRPDVETWNVLITGYCLAREPEEAFAVI 177
Query: 218 DVMT----VKPNLLAYNTMINGFCKKGEL-------EEAKKCM----------------- 249
M V P+L +N +++G CK G++ E ++ M
Sbjct: 178 REMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKA 237
Query: 250 ----------NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
E GC + TY A++ L N ++ EA LM K+ NG ++T+
Sbjct: 238 GMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATY 297
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++L GLC +G+ ++A+ LR +++ PDV +Y +I+G K +S EA L KEM +
Sbjct: 298 NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAS 357
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RGL + A+ R L++ G++ +A + K M C+P+ V+ +T+I GL A GR+
Sbjct: 358 RGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA-GRIG 416
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ M G + +YS L+ G C+ ++ +++ +M
Sbjct: 417 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 460
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 133/259 (51%), Gaps = 20/259 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK-------MGMIEN 212
+ ++++ L + I A F + + P +V Y+ +I G CK + M+
Sbjct: 401 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEV-VYSALIHGLCKARKMDCALEMLAQ 459
Query: 213 AKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
KK F P+ + YN +I+G CK G++E A+ +EM+ GC+P+ TYN +I GLC
Sbjct: 460 MKKAF----CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLC 515
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G D A ++ M + F + S++ GLC GK + L + ME + + +
Sbjct: 516 KAGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLEGGC-MLFHEMERSGVANSQ 569
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+ +I CK + DEA+SL +R G+ P +++N++ L+++G+++ + ++M
Sbjct: 570 TRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 628
Query: 393 PQMDCLPNFVSYNTIICGL 411
+ P+ V+YN ++ G+
Sbjct: 629 TRW-WKPDRVTYNALLNGM 646
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 146/303 (48%), Gaps = 20/303 (6%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLKNSNK---LSDFF-ISKLIKAYGDRGNVKAA--IFW 145
T CYTA+ LL I A+S+ K + D +S +I G + AA IF
Sbjct: 364 TVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 423
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+A+ + +YS +L+ L + + A E Q+ K+ PD TY +I G C
Sbjct: 424 SMEARGLAPNEVVYS--ALIHGLCKARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLC 480
Query: 206 KMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
K G +E A+ FD M KP++ YN +I+G CK G + A +++M + +
Sbjct: 481 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS-----SRF 535
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
Y++++ GLC +G+++ ML +M +G N T ++ LC + D+AV +
Sbjct: 536 VYSSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAI 594
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ M P +Y +I+ K GK +E ++ +EM R KP ++NA+ ++ +
Sbjct: 595 RKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRM 652
Query: 383 DRA 385
DRA
Sbjct: 653 DRA 655
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 3/244 (1%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEM-MNRGCRPNELTYNAMIYGLCINGRVDEAK 281
+P++ +N +I G+C E EEA + EM + G P+ T+N +++GLC +G+V A
Sbjct: 151 RPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAM 210
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
+R + +T ++ GL G QA + D+ +Y ++N
Sbjct: 211 DHFEAVR-RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWL 269
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
K K EA++L++++ A G PT+ ++NA+ L + G L+ AI LL+++ C P+
Sbjct: 270 AKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 329
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
V+Y ++I GL K R + L M G LD Y+ L++G + G + +
Sbjct: 330 VTYTSLIDGLGKEK-RSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYK 388
Query: 462 EMVT 465
M +
Sbjct: 389 TMTS 392
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 117/238 (49%), Gaps = 3/238 (1%)
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +++ F + EA + + RP+ T+N +I G C+ +EA ++ +M
Sbjct: 123 NALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEE 182
Query: 290 N-GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ G ++ TH +L GLC GK A+ + V +M ++ ++ING K G
Sbjct: 183 DFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRR-SMPVSAATFSILINGLVKAGMMI 241
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
+A SL +E G + ++ A+ L +N ++ A+ L++++ C P +YN ++
Sbjct: 242 QAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALL 301
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GLC GR+++ DL+ +++ +G D Y+ L+ G +E ++ EM ++
Sbjct: 302 NGLC-KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASR 358
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+ Y+SL+ L + ++ FH++ + V + T T +I CK ++ A +F+
Sbjct: 535 FVYSSLVDGLCKSGKLEGGCMLFHEMERSGVA--NSQTRTRLIFHLCKANRVDEAVSLFN 592
Query: 219 VMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ + P+ AYN++I+ K G++ E + EM R +P+ +TYNA++ G+ R
Sbjct: 593 AIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANR 651
Query: 277 VDEAKMLMAKMRLNGFKDNVST-HK 300
+D A +M G+ VS HK
Sbjct: 652 MDRAHYYYLEMTGRGYVPPVSILHK 676
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 92/209 (44%), Gaps = 36/209 (17%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
GF+ +V T ++L + +A L+N + PDV+++ V+I G+C + +EA
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173
Query: 351 ISLLKEMRAR-GLKPTVFSFN------------------------------AVFRI---- 375
++++EM G+ P++ + N A F I
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILING 233
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
LV+ G + +A L ++ C + +Y I+ L K ++Q+ L++++ +G
Sbjct: 234 LVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNK-KIQEAVALMEKITANGCTP 292
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
Y+ LL G C+ G +E + + ++V
Sbjct: 293 TIATYNALLNGLCKMGRLEEAIDLLRKIV 321
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 159/310 (51%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM---GMIENAKKV 216
S+N + N+I A F+++++ PP + ++ KM + +
Sbjct: 28 SHNRFHSKSLHFNTIDGAISSFNRMLRMQP-PPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
D + PN+ + +IN FC + A + +++ G +P+ T+ +I G+C+ G+
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L KM GF+ +V T+ +++ GLC VG A+ L ++++ N P+V +Y
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ CK + EA +L EM +G+ P +F++N++ L E LL +M
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+P+ VS+NT++ LC +G++ + D+VD+MI+ G + Y+ L+ G+C ++
Sbjct: 267 IMPDVVSFNTVVDALC-KEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325
Query: 457 MQIAHEMVTK 466
+++ MV K
Sbjct: 326 VKVFDTMVCK 335
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 174/368 (47%), Gaps = 30/368 (8%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S+N+++ L + + A + ++++ V P+V TYT ++ G+C + ++ A KVFD
Sbjct: 273 SFNTVVDALCKEGKVTEAHDVVDKMIQRGV-EPNVVTYTALMDGHCLLSEMDEAVKVFDT 331
Query: 220 MTVK---PNLLAYNTMINGFCKKGE-------------------LEEAKKCMNEMMNRGC 257
M K PN+++YNT+ING+CK ++EA K + M+ +GC
Sbjct: 332 MVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGC 391
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
PN ++YN +I G C R+D+A L +M + T+ +++ GLC V + A+
Sbjct: 392 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIA 451
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
++ + P++ +Y ++++ CK EA++LLK + L P + N +
Sbjct: 452 LFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMC 511
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
GEL+ A L + P+ +Y+ +I GLC +G + + L M +G L+
Sbjct: 512 RAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLC-RRGLLDEASKLFREMDENGCTLNG 570
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK------KGRLLKLKNFLTRVVDALLLMWIVT 491
+Y+ + +G+ +Q+ EMV + L +K +D L +
Sbjct: 571 CIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRN 630
Query: 492 GGSWISRF 499
G WIS F
Sbjct: 631 GCKWISTF 638
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 156/328 (47%), Gaps = 24/328 (7%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YNSL+ L + K +++V ++ PDV ++ T++ CK G + A V
Sbjct: 236 IFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM-PDVVSFNTVVDALCKEGKVTEAHDVV 294
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M V+PN++ Y +++G C E++EA K + M+ +GC PN ++YN +I G C
Sbjct: 295 DKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKI 354
Query: 275 GRV-------------------DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
R+ DEA + M G NV ++ +++ G C + + D+A
Sbjct: 355 QRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 414
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ + + PD +Y +I+G C + + +AI+L EM A P + ++ +
Sbjct: 415 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 474
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L +N L A+ LLK + + P+ N I G+C A G ++ DL + G
Sbjct: 475 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRA-GELEAARDLFSNLSSKGLQP 533
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D YS ++ G C G ++ ++ EM
Sbjct: 534 DVWTYSIMINGLCRRGLLDEASKLFREM 561
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 162/357 (45%), Gaps = 59/357 (16%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +L+ + I A F +++ E PDV TY T+I G CK+G A ++
Sbjct: 133 TFTTLIRGICVEGKIGEALHLFDKMIGEGF-RPDVVTYGTLINGLCKVGNTSAAIRLLGS 191
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY------- 269
M K PN+ AYNT+I+ CK ++ EA +EM+ +G P+ TYN++I+
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251
Query: 270 ----------------------------GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
LC G+V EA ++ KM G + NV T+ +
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK--------------- 346
++ G C++ + D+AV ++ P+V SY +ING+CKI +
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXC 371
Query: 347 ----SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
DEA+ + M +G P V S+N + + +D+A+ L +M + + +P+ V
Sbjct: 372 CYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 431
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+Y+T+I GLC + R+QD L M+ + Y LL C+ + M +
Sbjct: 432 TYSTLIHGLCHVE-RLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMAL 487
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQ---AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
S LI ++ AI FH+ QI N L +Y LL L + + A
Sbjct: 434 STLIHGLCHVERLQDAIALFHEMVACSQIPN---LVTYRILLDYLCKNRYLAEAMALLKA 490
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
I N+ PD+ I G C+ G +E A+ +F ++ K P++ Y+ MING C++G
Sbjct: 491 IEGSNL-DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRG 549
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
L+EA K EM GC N YN + G N A L+ +M GF + ST
Sbjct: 550 LLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMT 609
Query: 301 SMLKGLCVVGKFDQAVG-YLRN 321
+K L G DQ++ LRN
Sbjct: 610 LFVKMLSDDG-LDQSLKQILRN 630
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 198/429 (46%), Gaps = 18/429 (4%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKA 141
+PN Y+ ++ VL++ L++ S + N ++ + LI + GN K
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT---FNALIDGHISEGNFKE 351
Query: 142 AI--FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTT 199
A+ F+ +AK + SY LL L + LA F+ ++ K N V TYT
Sbjct: 352 ALKMFYMMEAKGLTPSE--VSYGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGRITYTG 408
Query: 200 MIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
MI G CK G ++ A + + M+ + P+++ Y+ +INGFCK G + AK+ + + G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
PN + Y+ +IY C G + EA + M L G + T ++ LC GK +A
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
++R + + P+ S++ +ING+ G+ +A S+ EM G PT F++ ++ + L
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ G L A LK + + + V YNT++ +C + G + L M++ D
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS-GNLAKAVSLFGEMVQRSILPD 647
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWI 496
Y+ L+ G C +G + A E +G +L K T VD + G W
Sbjct: 648 SYTYTSLISGLCRKGKTVIAILFAKE-AEARGNVLPNKVMYTCFVDGMF-----KAGQWK 701
Query: 497 SRFVFVHQV 505
+ F Q+
Sbjct: 702 AGIYFREQM 710
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 158/340 (46%), Gaps = 5/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G+ + + + + ++ + +YN++L + K A E + K
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM-KSK 257
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
V DV TY +I C+ I + M + PN + YNT+INGF +G++ A
Sbjct: 258 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 317
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +NEM++ G PN +T+NA+I G G EA + M G + ++ +L G
Sbjct: 318 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 377
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +FD A G+ + + +Y +I+G CK G DEA+ LL EM G+ P
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +++A+ + G A ++ ++ ++ PN + Y+T+I C G +++ +
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM-GCLKEAIRIY 496
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ MI GH D ++ L+ C+ G V + M +
Sbjct: 497 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 164/342 (47%), Gaps = 9/342 (2%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
F+ + KA G KA I++ Q + + + + N+++ R+ I+ + ++
Sbjct: 690 FVDGMFKA----GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+N P+++TY ++ GY K + + ++ + + P+ L ++++ G C+
Sbjct: 746 GNQNG-GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 804
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
LE K + + RG + T+N +I C NG ++ A L+ M G + T +
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
M+ L +F ++ L + + ++P+ + Y +ING C++G A + +EM A
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P + +A+ R L + G+ D A LLL+ M +M +P S+ T++ LC G + +
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM-HLCCKNGNVIEA 983
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+L M G LD Y+ L+ G C +G++ ++ EM
Sbjct: 984 LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 133/307 (43%), Gaps = 39/307 (12%)
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVM---------------------------------- 220
S Y +IR Y + GMI+++ ++F +M
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183
Query: 221 ----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ P++ +N +IN C +G E++ M +M G P +TYN +++ C GR
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
A L+ M+ G +V T+ ++ LC + + LR++ + ++P+ +Y
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+INGF GK A LL EM + GL P +FNA+ + G A+ + M
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ VSY ++ GLC RM R+G + Y+ ++ G C+ G ++
Sbjct: 364 LTPSEVSYGVLLDGLC-KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422
Query: 457 MQIAHEM 463
+ + +EM
Sbjct: 423 VVLLNEM 429
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 5/321 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I Y G ++ + G L +YN LL + + + + I+ N
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL-N 783
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ PD T +++ G C+ M+E K+ F V+ + +N +I+ C GE+ A
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M + G ++ T +AM+ L N R E++M++ +M G + ++ G
Sbjct: 844 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 903
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC VG A ++ + P + ++ K GK+DEA LL+ M L PT
Sbjct: 904 LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 963
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ SF + + +NG + A+ L M + VSYN +I GLC AKG M +L
Sbjct: 964 IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC-AKGDMALAFELY 1022
Query: 426 DRMIRSGHNLDFTMYSCLLKG 446
+ M G + T Y L++G
Sbjct: 1023 EEMKGDGFLANATTYKALIRG 1043
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 12/315 (3%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+++N L+ L + + AEEF + + ++P VS + +I GY G A VFD
Sbjct: 509 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS-FDCLINGYGNSGEGLKAFSVFD 567
Query: 219 VMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
MT P Y +++ G CK G L EA+K + + + + YN ++ +C +G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV-MEANMNPDVKSY 334
+ +A L +M + T+ S++ GLC GK A+ + + N+ P+ Y
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++G K G+ I ++M G P + + NA+ G++++ LL +M
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ PN +YN ++ G + +DV L +I +G D L+ G CE
Sbjct: 748 QNGGPNLTTYNILLHGY----SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 803
Query: 452 NVENVMQIAHEMVTK 466
+E ++I + +
Sbjct: 804 MLEIGLKILKAFICR 818
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 156/352 (44%), Gaps = 14/352 (3%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F L+K G+++ A + + YN+LL + + ++ A F +
Sbjct: 579 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 638
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMG----MIENAKKVFDVMTVKPNLLAYNTMINGFCKK 239
+V+ +++P D TYT++I G C+ G I AK+ V PN + Y ++G K
Sbjct: 639 MVQRSILP-DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 697
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G+ + +M N G P+ +T NAMI G G++++ L+ +M N++T+
Sbjct: 698 GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTY 757
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+L G + R+++ + PD + ++ G C+ + + +LK
Sbjct: 758 NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 817
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA----K 415
RG++ ++FN + NGE++ A L+K M + +S + C ++
Sbjct: 818 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG-----ISLDKDTCDAMVSVLNRN 872
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
R Q+ ++ M + G + + Y L+ G C G+++ + EM+ K
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 9/215 (4%)
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
R C N Y+ +I G + ++ + M L GF +V T ++L + G+
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
+L+ +++ + PDV ++ ++IN C G +++ L+++M G PT+ ++N V
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC----MAKGRMQDVEDLVDRMIR 430
+ G AI LL M + +YN +I LC +AKG + + D+ RMI
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL-LRDMRKRMIH 295
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
Y+ L+ G+ EG V Q+ +EM++
Sbjct: 296 PNE----VTYNTLINGFSNEGKVLIASQLLNEMLS 326
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
+ P Y +ING C+ G+++ A EM+ P + +AM+ L G+ DEA
Sbjct: 890 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME-ANMNPDVKSYEVVING 340
+L+ M +++ +++ C G +A+ LR VM + D+ SY V+I G
Sbjct: 950 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL-ELRVVMSNCGLKLDLVSYNVLITG 1008
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR-ILVENGELDRAILLLKQM 392
C G A L +EM+ G ++ A+ R +L A ++LK +
Sbjct: 1009 LCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDL 1061
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 164/321 (51%), Gaps = 17/321 (5%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
H++ ++ L+ NSLL L + A + E PDV TY T+ G+C
Sbjct: 155 LHRSHRVAQDLPLF--NSLLDALSKSRHAGKAASLVRAL--EQRFTPDVVTYNTLADGWC 210
Query: 206 KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-----C 257
++ A V +M + P YN ++ GF + G+L A +M RG C
Sbjct: 211 RVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESC 270
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
+P+ ++Y M++GL + G++++A+ + +M G +V+T+ ++++ +C G + AV
Sbjct: 271 KPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVT 330
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
++ P+V +Y V+I G C GK D + LL+ M+ G +P V ++N + R L
Sbjct: 331 VFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLF 390
Query: 378 ENGELDRAILLLKQMPQ-MDCLPNFVSYNTIICGLCMAKGRMQDV---EDLVDRMIRSGH 433
E GE+++ + L ++M + +CLPN +YN II + M K R +D+ +VD M+ G+
Sbjct: 391 EEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRK-RAEDMVLAARMVDEMVDRGY 449
Query: 434 NLDFTMYSCLLKGYCEEGNVE 454
M++ +L G GN E
Sbjct: 450 LPRRFMFNRVLNGLMLTGNQE 470
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 128/290 (44%), Gaps = 33/290 (11%)
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMI 233
LA F + + + V D+ + +++ K A + + + P+++ YNT+
Sbjct: 147 LAVRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYNTLA 206
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G+C+ + A + M+ G P + TYN ++ G G++ A +M+ G K
Sbjct: 207 DGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSK 266
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
D + PDV SY +++G G+ ++A +
Sbjct: 267 DE------------------------------SCKPDVVSYTTMVHGLGVAGQLEKARKV 296
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
EM G P+V ++NA+ +++ + G ++ A+ + M +PN V+Y +I GLC
Sbjct: 297 FDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLIRGLCH 356
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
A G++ L++RM G Y+ L++ EEG +E + + +M
Sbjct: 357 A-GKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKM 405
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 93/191 (48%), Gaps = 7/191 (3%)
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
++ ++ R + ++ S+L L +A +R +E PDV +Y + +G
Sbjct: 150 RLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVR-ALEQRFTPDVVTYNTLADG 208
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM----- 395
+C++ + A+ +L+ M G+ PT ++N + + G+L A QM +
Sbjct: 209 WCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDE 268
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C P+ VSY T++ GL +A G+++ + D M + G Y+ L++ C++GNVE+
Sbjct: 269 SCKPDVVSYTTMVHGLGVA-GQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVED 327
Query: 456 VMQIAHEMVTK 466
+ + M+ K
Sbjct: 328 AVTVFDGMLVK 338
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 86/200 (43%), Gaps = 43/200 (21%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ ++ G G ++ A F + + + +YN+L+ V+ + +++ A F ++
Sbjct: 278 TTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLV 337
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ VP +V TYT +IRG C G I+ K+ + M +P + YN +I ++GE+E
Sbjct: 338 KGYVP-NVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEME 396
Query: 244 E---------------------------------------AKKCMNEMMNRGCRPNELTY 264
+ A + ++EM++RG P +
Sbjct: 397 KGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVDEMVDRGYLPRRFMF 456
Query: 265 NAMIYGLCINGRVDEAKMLM 284
N ++ GL + G + ++ L+
Sbjct: 457 NRVLNGLMLTGNQELSRKLL 476
>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g09900-like [Glycine max]
Length = 603
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 160/319 (50%), Gaps = 16/319 (5%)
Query: 157 CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT---------TMIRGYCKM 207
C+ + +L+ ++ K A I++E+ D++ Y +I GYC
Sbjct: 148 CVIACTALISEFCKIGRTKNATRIM-GILEESGAVIDITIYNFFCLPKKNNVLIGGYCXS 206
Query: 208 GMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
G +E A +V D M+V PN + Y+T++ C + +L++ + ++ + C P+ +TY +
Sbjct: 207 GEVEEALRVLDCMSVSPNGINYDTILRSLCDRCKLKQGMEVLDRQLQIKCYPDVVTYTEL 266
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I C + RV +A L+ +M K NV T+ +++KG+C G+ D+ + +L+N+
Sbjct: 267 IDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSYGY 326
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PDV SY +V++ G+ +A+ LL M +G V +FN + L + G L +A
Sbjct: 327 QPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFN 386
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
+L+ + + C PN +SYN I G C K ++ M+ G D Y+ LL
Sbjct: 387 VLEMIXKHVCTPNSISYNPSIGGFCNEKSXYLEI------MVSRGCYPDIVTYNILLAAL 440
Query: 448 CEEGNVENVMQIAHEMVTK 466
C++ V++ ++I ++ K
Sbjct: 441 CKDRKVDDAVEILKQLSFK 459
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 132/278 (47%), Gaps = 20/278 (7%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKC 248
PDV +YT ++ G +A K+ M K N++ +NT+IN C+KG L +A
Sbjct: 328 PDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNV 387
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ + C PN ++YN I G C +E + M G ++ T+ +L LC
Sbjct: 388 LEMIXKHVCTPNSISYNPSIGGFC-----NEKSXYLEIMVSRGCYPDIVTYNILLAALCK 442
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
K D AV L+ + + PDV +Y ++I+G K+GK+D A+ LL+E +GLKP + +
Sbjct: 443 DRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLALELLEEACTKGLKPNLIT 502
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
F +V + G++ AI + + + PN +YN II GLC +
Sbjct: 503 FTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLIIMGLCKT------------QQ 550
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G Y+ L+KG EG + ++ E+ +K
Sbjct: 551 TSRGCKPTEATYNILVKGITSEGXPKEASKLWSELYSK 588
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 28/161 (17%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YN LL L + + A E Q+ + + PDV TY+ +I G K+G + A ++
Sbjct: 430 IVTYNILLAALCKDRKVDDAVEILKQLSFKGL-KPDVITYSIIIDGLLKVGKTDLALELL 488
Query: 218 D---VMTVKPNLLAYNTMINGFCKKGELEEAKK------------------------CMN 250
+ +KPNL+ + +++ G +KG++ EA K C
Sbjct: 489 EEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLIIMGLCKT 548
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG 291
+ +RGC+P E TYN ++ G+ G EA L +++ G
Sbjct: 549 QQTSRGCKPTEATYNILVKGITSEGXPKEASKLWSELYSKG 589
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 100/194 (51%), Gaps = 23/194 (11%)
Query: 290 NGFKDNVSTHKSMLKGLCVV---GKFDQAVGYLRNVM-EANMNPDVKSYEVVINGFCKIG 345
NG +++ +S + L V+ G+ D+A +L + + N+ P V + +I+ FCKIG
Sbjct: 104 NGVNTSLNFEESEIHHLHVLIKNGELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIG 163
Query: 346 KSDEAISLLKEMRARG--LKPTVFSF-------NAVFRILVENGELDRAILLLKQMPQMD 396
++ A ++ + G + T+++F N + +GE++ A+ +L D
Sbjct: 164 RTKNATRIMGILEESGAVIDITIYNFFCLPKKNNVLIGGYCXSGEVEEALRVL------D 217
Query: 397 CL---PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
C+ PN ++Y+TI+ LC + +++ +++DR ++ D Y+ L+ C++ V
Sbjct: 218 CMSVSPNGINYDTILRSLC-DRCKLKQGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRV 276
Query: 454 ENVMQIAHEMVTKK 467
M++ EMV+K+
Sbjct: 277 GQAMKLLIEMVSKE 290
>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Glycine max]
Length = 572
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 151/279 (54%), Gaps = 4/279 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
P+V+ T ++ CK A +V ++M + P+ +Y ++N CK+G + A +
Sbjct: 97 PEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQL 156
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +M G N +TYN ++ GLC++G ++++ L+ ++ G N T+ +L+
Sbjct: 157 VEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYK 216
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
D+A+ L +++ P++ SY V++ G CK G+++EAI L +E+ +G P+V S
Sbjct: 217 ERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVS 276
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
FN + R L G + A LL +M + D P+ V+YN +I L + GR + ++D M
Sbjct: 277 FNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSL-NGRTEQAFKVLDEM 335
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
RSG T Y+ ++ C+EG V+ V++ +M+ ++
Sbjct: 336 TRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRR 374
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 163/315 (51%), Gaps = 13/315 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SY L+ L + ++ A + ++ + + P + TY T+++G C G + + ++ D
Sbjct: 136 SYTHLVNFLCKRGNVGYAIQLVEKM-EGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDR 194
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+T K PN Y+ ++ K+ ++EA K +++++ +G PN ++YN ++ GLC GR
Sbjct: 195 LTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGR 254
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+EA L ++ + GF +V + +L+ LC G++++A L + + + P V +Y +
Sbjct: 255 TEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNI 314
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G++++A +L EM G K + S+N + L + G++D + L QM
Sbjct: 315 LITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRR 374
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM---YSCLLKGYCEEGNV 453
C PN +Y+ I + +G++Q+ ++ + G +F M Y L+ C +GN
Sbjct: 375 CHPNEGTYSAI--SMLSEQGKVQEAFFIIQSL---GSKQNFPMHDFYKNLIASLCRKGNT 429
Query: 454 ENVMQIAHEMVTKKG 468
Q+ +EM TK G
Sbjct: 430 YPAFQMLYEM-TKYG 443
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 158/327 (48%), Gaps = 6/327 (1%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RGNV AI + + +YN+L+ L ++ + + ++ K+ ++P +
Sbjct: 147 RGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIP-NAF 205
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY+ ++ K ++ A K+ D + K PNL++YN ++ G CK+G EEA K E+
Sbjct: 206 TYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQEL 265
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+G P+ +++N ++ LC GR +EA L+A+M +V T+ ++ L + G+
Sbjct: 266 PVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRT 325
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+QA L + + SY +I CK GK D + L +M R P +++A+
Sbjct: 326 EQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSAI 385
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+L E G++ A +++ + P Y +I LC KG ++ M + G
Sbjct: 386 -SMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLC-RKGNTYPAFQMLYEMTKYG 443
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQI 459
D YS L++G C EG ++ ++I
Sbjct: 444 FTPDSYTYSSLIRGMCREGMLDEALKI 470
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 38/301 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ G + AI F + + S+N LL L + A E ++ KE+
Sbjct: 245 LLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKED 304
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
PP V TY +I G E A KV D MT K + +YN +I CK+G+++
Sbjct: 305 Q-PPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLV 363
Query: 246 KKCMNEMMNRGCRPNELTYNA----------------------------------MIYGL 271
KC+++M++R C PNE TY+A +I L
Sbjct: 364 LKCLDQMIHRRCHPNEGTYSAISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASL 423
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G A ++ +M GF + T+ S+++G+C G D+A+ R + E + PD+
Sbjct: 424 CRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDI 483
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I GFCK ++D +I + M +G P ++ + L E D A L+K+
Sbjct: 484 DNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETDIAADLMKE 543
Query: 392 M 392
+
Sbjct: 544 L 544
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 4/163 (2%)
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
I ++G V+ A F +N Y +L+ L R + A + +++ K
Sbjct: 385 ISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQMLYEMTKYGF 444
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAK 246
P D TY+++IRG C+ GM++ A K+F ++ +P++ YN +I GFCK + +
Sbjct: 445 TP-DSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGFCKAQRTDLSI 503
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+ M+N+GC PNE TY ++ GL D A LM ++ L
Sbjct: 504 EIFLMMVNKGCVPNENTYTILVEGLAFEEETDIAADLMKELYL 546
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 36/241 (14%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
KP + ++ CK + +A + M M+ G P+ +Y ++ LC G V A
Sbjct: 96 KPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQ 155
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L+ KM +GF N T+ +++K G C
Sbjct: 156 LVEKMEGHGFPTNTVTYNTLVK-----------------------------------GLC 180
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
G ++++ LL + +GL P F+++ + + +D A+ LL + PN V
Sbjct: 181 MHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLV 240
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
SYN ++ GLC +GR ++ L + G + ++ LL+ C EG E ++ E
Sbjct: 241 SYNVLLTGLC-KEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAE 299
Query: 463 M 463
M
Sbjct: 300 M 300
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 10/221 (4%)
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R+ +A + + + G K V+ +L LC K +AV + ++ + + PD SY
Sbjct: 79 RIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYT 138
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++N CK G AI L+++M G ++N + + L +G L++++ LL ++ +
Sbjct: 139 HLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKK 198
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+PN +Y+ ++ +G + + L+D +I G + Y+ LL G C+EG E
Sbjct: 199 GLIPNAFTYSFLLEAAYKERG-VDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEE 257
Query: 456 VMQIAHEMVTKKGRLLKLKNFLTRVVD-ALLLMWIVTGGSW 495
+++ E L +K F VV +LL + G W
Sbjct: 258 AIKLFQE--------LPVKGFSPSVVSFNILLRSLCYEGRW 290
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 198/429 (46%), Gaps = 18/429 (4%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKA 141
+PN Y+ ++ VL++ L++ S + N ++ + LI + GN K
Sbjct: 335 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT---FNALIDGHISEGNFKE 391
Query: 142 AI--FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTT 199
A+ F+ +AK + SY LL L + LA F+ ++ K N V TYT
Sbjct: 392 ALKMFYMMEAKGLTPSEV--SYGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGRITYTG 448
Query: 200 MIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
MI G CK G ++ A + + M+ + P+++ Y+ +INGFCK G + AK+ + + G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
PN + Y+ +IY C G + EA + M L G + T ++ LC GK +A
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
++R + + P+ S++ +ING+ G+ +A S+ EM G PT F++ ++ + L
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ G L A LK + + + V YNT++ +C + G + L M++ D
Sbjct: 629 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS-GNLAKAVSLFGEMVQRSILPD 687
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWI 496
Y+ L+ G C +G + A E +G +L K T VD + G W
Sbjct: 688 SYTYTSLISGLCRKGKTVIAILFAKE-AEARGNVLPNKVMYTCFVDGMF-----KAGQWK 741
Query: 497 SRFVFVHQV 505
+ F Q+
Sbjct: 742 AGIYFREQM 750
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 158/340 (46%), Gaps = 5/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G+ + + + + ++ + +YN++L + K A E + K
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM-KSK 297
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
V DV TY +I C+ I + M + PN + YNT+INGF +G++ A
Sbjct: 298 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 357
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +NEM++ G PN +T+NA+I G G EA + M G + ++ +L G
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +FD A G+ + + +Y +I+G CK G DEA+ LL EM G+ P
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +++A+ + G A ++ ++ ++ PN + Y+T+I C G +++ +
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM-GCLKEAIRIY 536
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ MI GH D ++ L+ C+ G V + M +
Sbjct: 537 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 576
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 164/342 (47%), Gaps = 9/342 (2%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
F+ + KA G KA I++ Q + + + + N+++ R+ I+ + ++
Sbjct: 730 FVDGMFKA----GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 785
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+N P+++TY ++ GY K + + ++ + + P+ L ++++ G C+
Sbjct: 786 GNQNG-GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 844
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
LE K + + RG + T+N +I C NG ++ A L+ M G + T +
Sbjct: 845 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 904
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
M+ L +F ++ L + + ++P+ + Y +ING C++G A + +EM A
Sbjct: 905 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 964
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P + +A+ R L + G+ D A LLL+ M +M +P S+ T++ LC G + +
Sbjct: 965 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM-HLCCKNGNVIEA 1023
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+L M G LD Y+ L+ G C +G++ ++ EM
Sbjct: 1024 LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1065
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 133/307 (43%), Gaps = 39/307 (12%)
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVM---------------------------------- 220
S Y +IR Y + GMI+++ ++F +M
Sbjct: 164 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 223
Query: 221 ----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ P++ +N +IN C +G E++ M +M G P +TYN +++ C GR
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
A L+ M+ G +V T+ ++ LC + + LR++ + ++P+ +Y
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+INGF GK A LL EM + GL P +FNA+ + G A+ + M
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ VSY ++ GLC RM R+G + Y+ ++ G C+ G ++
Sbjct: 404 LTPSEVSYGVLLDGLC-KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 457 MQIAHEM 463
+ + +EM
Sbjct: 463 VVLLNEM 469
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 5/321 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I Y G ++ + G L +YN LL + + + + I+ N
Sbjct: 765 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL-N 823
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ PD T +++ G C+ M+E K+ F V+ + +N +I+ C GE+ A
Sbjct: 824 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 883
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M + G ++ T +AM+ L N R E++M++ +M G + ++ G
Sbjct: 884 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 943
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC VG A ++ + P + ++ K GK+DEA LL+ M L PT
Sbjct: 944 LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 1003
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ SF + + +NG + A+ L M + VSYN +I GLC AKG M +L
Sbjct: 1004 IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC-AKGDMALAFELY 1062
Query: 426 DRMIRSGHNLDFTMYSCLLKG 446
+ M G + T Y L++G
Sbjct: 1063 EEMKGDGFLANATTYKALIRG 1083
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 12/315 (3%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+++N L+ L + + AEEF + + ++P VS + +I GY G A VFD
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS-FDCLINGYGNSGEGLKAFSVFD 607
Query: 219 VMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
MT P Y +++ G CK G L EA+K + + + + YN ++ +C +G
Sbjct: 608 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV-MEANMNPDVKSY 334
+ +A L +M + T+ S++ GLC GK A+ + + N+ P+ Y
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++G K G+ I ++M G P + + NA+ G++++ LL +M
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 787
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ PN +YN ++ G + +DV L +I +G D L+ G CE
Sbjct: 788 QNGGPNLTTYNILLHGY----SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 843
Query: 452 NVENVMQIAHEMVTK 466
+E ++I + +
Sbjct: 844 MLEIGLKILKAFICR 858
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 156/352 (44%), Gaps = 14/352 (3%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F L+K G+++ A + + YN+LL + + ++ A F +
Sbjct: 619 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 678
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMG----MIENAKKVFDVMTVKPNLLAYNTMINGFCKK 239
+V+ +++P D TYT++I G C+ G I AK+ V PN + Y ++G K
Sbjct: 679 MVQRSILP-DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 737
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G+ + +M N G P+ +T NAMI G G++++ L+ +M N++T+
Sbjct: 738 GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTY 797
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+L G + R+++ + PD + ++ G C+ + + +LK
Sbjct: 798 NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 857
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA----K 415
RG++ ++FN + NGE++ A L+K M + +S + C ++
Sbjct: 858 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG-----ISLDKDTCDAMVSVLNRN 912
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
R Q+ ++ M + G + + Y L+ G C G+++ + EM+ K
Sbjct: 913 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 964
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
R C N Y+ +I G + ++ + M L GF +V T ++L + G+
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
+L+ +++ + PDV ++ ++IN C G +++ L+++M G PT+ ++N V
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC----MAKGRMQDVEDLVDRMIR 430
+ G AI LL M + +YN +I LC +AKG + + D+ RMI
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL-LRDMRKRMI- 334
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
H + T Y+ L+ G+ EG V Q+ +EM++
Sbjct: 335 --HPNEVT-YNTLINGFSNEGKVLIASQLLNEMLS 366
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
+ P Y +ING C+ G+++ A EM+ P + +AM+ L G+ DEA
Sbjct: 930 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 989
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME-ANMNPDVKSYEVVING 340
+L+ M +++ +++ C G +A+ LR VM + D+ SY V+I G
Sbjct: 990 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL-ELRVVMSNCGLKLDLVSYNVLITG 1048
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR-ILVENGELDRAILLLKQM 392
C G A L +EM+ G ++ A+ R +L A ++LK +
Sbjct: 1049 LCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDL 1101
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 157/308 (50%), Gaps = 25/308 (8%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+ ++ L ++ A F ++ K V PDV TYT +I +CK G+IE A+ +F+
Sbjct: 459 TYSKVITFLCHATKVEKAFLLFQEM-KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEE 517
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M P ++ Y +I+ + K ++ +A + M++ GCRPN++TY A++ GLC G
Sbjct: 518 MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 577
Query: 277 VDEAKMLMAKMRLNGFKD------------------NVSTHKSMLKGLCVVGKFDQAVGY 318
+ +A + AK L G D NV T+ +++ GLC K D A
Sbjct: 578 ISKAFEVYAK--LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHEL 635
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
L ++ + P+ Y+ +I+GFCK GK D A + +M G P+V ++ ++ + +
Sbjct: 636 LDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFK 695
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
+G LD A+ +L QM + C PN V+Y +I GLC G + L+ M G + +
Sbjct: 696 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI-GESEKALKLLSLMEEKGCSPNVV 754
Query: 439 MYSCLLKG 446
Y+ L+ G
Sbjct: 755 TYTALIDG 762
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 140/263 (53%), Gaps = 20/263 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI ++ G ++ A + F + + + + +Y +L+ ++ + A + FH++V
Sbjct: 498 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 557
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF-------------------DVMTVKPNLLAY 229
P DV TY ++ G CK G I A +V+ D T+ PN++ Y
Sbjct: 558 CRPNDV-TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 616
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+++G CK +++ A + ++ M++ GC PN + Y+A+I G C G++D A+ + +M
Sbjct: 617 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 676
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G+ +V T+ S++ + G+ D A+ L +++ + P+V +Y +I+G C+IG+S++
Sbjct: 677 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 736
Query: 350 AISLLKEMRARGLKPTVFSFNAV 372
A+ LL M +G P V ++ A+
Sbjct: 737 ALKLLSLMEEKGCSPNVVTYTAL 759
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 138/304 (45%), Gaps = 20/304 (6%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
SK+I V+ A F + K + +Y+Y L+ + I+ A+ F ++ +
Sbjct: 461 SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM-R 519
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
P V TYT +I Y K + A +F M +PN + Y +++G CK G +
Sbjct: 520 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 579
Query: 244 EAKKCMNEMMNRG----------CR------PNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+A + +++ C PN +TY A++ GLC +VD A L+ M
Sbjct: 580 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 639
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+G + N + +++ G C GK D A + + P V +Y +I+ K G+
Sbjct: 640 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 699
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
D A+ +L +M P V ++ A+ L GE ++A+ LL M + C PN V+Y +
Sbjct: 700 DLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 759
Query: 408 ICGL 411
I GL
Sbjct: 760 IDGL 763
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 172/412 (41%), Gaps = 97/412 (23%)
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---P 224
L+ + A F H++ + N P+V TY T++ G+ K + K++ ++M + P
Sbjct: 286 LMEASYFDEAMSFLHRM-RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNP 344
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI---------------- 268
N +N++++ +C + + A K +N M GC P + YN I
Sbjct: 345 NPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLD 404
Query: 269 -----YG--------------------LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
YG LC G+ D+A L+ +M GF + ST+ ++
Sbjct: 405 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 464
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC K ++A + + + PDV +Y ++I+ FCK G ++A L +EMR+ G
Sbjct: 465 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 524
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG------- 416
PTV ++ A+ ++ ++ +A + +M C PN V+Y ++ GLC A
Sbjct: 525 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 584
Query: 417 -------------------------------------------RMQDVEDLVDRMIRSGH 433
++ +L+D M+ SG
Sbjct: 585 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 644
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALL 485
+ +Y L+ G+C+ G +++ ++ +M TK G L + + T ++D +
Sbjct: 645 EPNHIVYDALIDGFCKAGKIDSAQEVFLQM-TKCGYLPSVHTY-TSLIDRMF 694
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 155/441 (35%), Gaps = 51/441 (11%)
Query: 74 FFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAY 133
FF WA Y HT CY A+ D L A LL+ + + +L+
Sbjct: 125 FFLWAERQV----GYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVL 180
Query: 134 GDR----GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
R G A+ + K +YN+L+ VL + L + + E+
Sbjct: 181 VRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRV-QKEMSESG 239
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
D T CK G +A + + K + + MI+G + +EA +
Sbjct: 240 FCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFL 299
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+ M C PN +TY ++ G ++ K ++ M G N S S++ C
Sbjct: 300 HRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNE 359
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVING----------------------------- 340
+ A L + P Y + I
Sbjct: 360 KDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCV 419
Query: 341 ------------FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
C +GK D+A L+KEM +G P +++ V L ++++A LL
Sbjct: 420 LNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLL 479
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
++M + P+ +Y +I C A G ++ + L + M G + Y+ L+ Y
Sbjct: 480 FQEMKMVGVTPDVYTYTILIDSFCKA-GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 538
Query: 449 EEGNVENVMQIAHEMVTKKGR 469
+ V I H MV R
Sbjct: 539 KAKQVPQANDIFHRMVDAGCR 559
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A+ + R G+ + + ++ L G+ A LR + E + + V++
Sbjct: 123 ARFFLWAERQVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVR 182
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD-CL 398
C+ G +EA+ L ++ G +P+ ++NA+ ++L G++D + K+M + C+
Sbjct: 183 RCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCM 242
Query: 399 PNFVSYNTIIC---GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
F T+ C LC +GR D D+++ R LD + + ++ G E +
Sbjct: 243 DRF----TVGCFAHALC-KEGRWADALDMIE---REDFKLDTVLCTHMISGLMEASYFDE 294
Query: 456 VMQIAHEM 463
M H M
Sbjct: 295 AMSFLHRM 302
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 153/308 (49%), Gaps = 7/308 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK----K 215
+Y +L+ R+ +++A H +++ VP + + + MI K ++E A K
Sbjct: 293 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANC-SFMIDELRKKELVEEAFSLACK 351
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ D+ V PN+ AYN +I+ CK ++A + EM RG PNE+TY +I+ LC G
Sbjct: 352 LGDLGMV-PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 410
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+++A L KMR G K V + S++ G C G D+A G L +++ + P SY
Sbjct: 411 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 470
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I G C+ G + L +EM RG+ ++F A+ ++ ++D A L +M
Sbjct: 471 PLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 530
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ +PN V++N +I G C+ G ++ L D+M+ G D Y L+ G C V
Sbjct: 531 NVIPNEVTFNVMIEGYCLV-GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 589
Query: 456 VMQIAHEM 463
+ ++
Sbjct: 590 ANEFVADL 597
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 161/330 (48%), Gaps = 7/330 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++YN+L+ L + A+ F ++ + P +V TY +I CK GMIE+A +F
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV-TYAILIHALCKRGMIEDALCLF 419
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M +K + YN++ING+CK+G L+ A+ ++ M+ G P +Y+ +I GLC N
Sbjct: 420 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 479
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + L +M G N T +++ G C K D+A ++++N+ P+ ++
Sbjct: 480 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 539
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+I G+C +G +A L +M GLKP +++ ++ L + +A + +
Sbjct: 540 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 599
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ N S ++ G +GR + L D M G LD ++ ++ ++ + E
Sbjct: 600 SYAVLNNFSLTALLYGF-FREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 658
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
+ EM K+ + F T ++DAL
Sbjct: 659 KSCVLFREM--KEQGVKPDDIFYTCMIDAL 686
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 170/340 (50%), Gaps = 5/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A RG ++ A+ F + + +Y YNSL+ + S+ A +VKE
Sbjct: 402 LIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG 461
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P ++Y+ +I G C+ G + + ++ M + N + +INGFCK +++EA
Sbjct: 462 LTPT-AASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 520
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++M++ PNE+T+N MI G C+ G + +A L +M G K + T++S++ G
Sbjct: 521 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 580
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC+ +A ++ ++ + + S ++ GF + G+ E L EM RG+K
Sbjct: 581 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 640
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ SF + ++ + +++ +L ++M + P+ + Y +I L + +Q + +
Sbjct: 641 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL-NCW 699
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
D+M+ G++ + ++ L+ C+ G + + + EM+
Sbjct: 700 DQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 739
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 158/344 (45%), Gaps = 40/344 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+ + +L LV++ LA + F ++++ V D YT IR YC+ ++ A+ +
Sbjct: 187 YTASQILFSLVKIRQFALARDLFDKMLQSGV-HLDEYVYTAGIRAYCESRNLDGARGLVV 245
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC--- 272
M VK + + YN ++ G CK ++EA + N M+N G +E+TY ++YG C
Sbjct: 246 RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME 305
Query: 273 --------------------------------INGRVDEAKMLMAKMRLNGFKDNVSTHK 300
V+EA L K+ G NV +
Sbjct: 306 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 365
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ LC +FD A + + + P+ +Y ++I+ CK G ++A+ L +MR +
Sbjct: 366 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 425
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+K TV+ +N++ + G LDRA LL M + P SY+ +I GLC G +
Sbjct: 426 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC-RNGDLSS 484
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+L M G + ++ L+ G+C++ ++ ++ +M+
Sbjct: 485 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 528
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 151/337 (44%), Gaps = 53/337 (15%)
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---V 222
G++VR+ S + VK + VP Y ++ G CK ++ A +V +VM V
Sbjct: 242 GLVVRMES---------EGVKASAVP-----YNVLMYGLCKNMRVQEAVEVKNVMVNIGV 287
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-------------------------- 256
+ + Y T++ GFC+ ELE A + ++M+ G
Sbjct: 288 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 347
Query: 257 --CR-------PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
C+ PN YNA+I LC N R D+A L +M G + N T+ ++ LC
Sbjct: 348 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 407
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G + A+ + + + V Y +ING+CK G D A LL M GL PT
Sbjct: 408 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 467
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
S++ + L NG+L + L ++M + N ++ +I G C K +M + L D+
Sbjct: 468 SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDK-KMDEAARLFDK 526
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
MI S + ++ +++GYC GN+ Q+ +MV
Sbjct: 527 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 563
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 119/238 (50%), Gaps = 4/238 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGE 241
+KE V PD YT MI K + A +D M V PN + + +IN CK G
Sbjct: 667 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 726
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L A+ EM+ PN+ TYN + G +++AK L + M L G ++ +
Sbjct: 727 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNI 785
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++KGLC GK +A+ + + E+ +PD SY +I+ CK+G ++A L EM +G
Sbjct: 786 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 845
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
LKP V ++N R +GE D+A+ + M + PN+ +Y ++ G+ + + Q
Sbjct: 846 LKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQ 903
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 157/346 (45%), Gaps = 41/346 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y++ +L+ + + A F +++ NV+P +V T+ MI GYC +G I A +++D
Sbjct: 502 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYD 560
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M +KP+ Y ++I+G C + +A + + ++ N N + A++YG G
Sbjct: 561 QMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREG 620
Query: 276 RVDEAKMLMAKMRLNGFKDNVST-----------------------------------HK 300
R E L +M + G K ++ + +
Sbjct: 621 RFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYT 680
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
M+ L QA+ ++ +P+ ++ V+IN CK G A L KEM A
Sbjct: 681 CMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAG 740
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+ P F++N G++++A L M Q L + VS+N +I GLC A G++Q+
Sbjct: 741 NVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGH-LASIVSFNILIKGLCKA-GKIQE 798
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
DL+ ++ SG + D YS ++ C+ G++ ++ +EM+ K
Sbjct: 799 AIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 844
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 114/236 (48%), Gaps = 3/236 (1%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
K D F + +I A N+ A+ + Q ++ L+ L + + AE
Sbjct: 673 KPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAEL 732
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFC 237
+++ NV+P TY + + G +E AK + M +++++N +I G C
Sbjct: 733 LCKEMLAGNVLPNKF-TYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLC 791
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K G+++EA M+++ G P+ ++Y+ +I+ LC G +++A L +M G K +V
Sbjct: 792 KAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVV 851
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ ++ V G+ D+A+G N++ + + P+ +Y +++G + +A+ L
Sbjct: 852 AYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQALLL 907
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
+G N T +L L + +F A ++++ ++ D Y I +C+ D
Sbjct: 180 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 239
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A L+ M + G+K + +N + L +N + A+ + M + + V+Y T++
Sbjct: 240 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 299
Query: 410 GLCMAKGRMQDVE---DLVDRMIRSG 432
G C RM+++E + MIR G
Sbjct: 300 GFC----RMEELEMALRITHDMIRLG 321
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 173/363 (47%), Gaps = 6/363 (1%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
++ A++ + L + + ++++ ++G K +F + + + +Y + + L
Sbjct: 202 ALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGL 261
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF----DVMTVKP 224
+ +K A ++V + P+V T+TT+I G CK+G E A ++F + KP
Sbjct: 262 CKRRYVKQAFHVLEEMVGRGL-KPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKP 320
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N+ Y MI G+C++G+L A+ + M+ +G +PN TY +I G C G D A LM
Sbjct: 321 NVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELM 380
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
KM+ GF N+ T+ +++ G C GK +A LR + D +Y ++I CK
Sbjct: 381 NKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQ 440
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G A+ L M G P + ++ ++ + +++ + + + LP +Y
Sbjct: 441 GHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTY 500
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
++I G C GR + +RM+++G D Y L+ G C+E +E + M+
Sbjct: 501 TSMIAGYCKV-GRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGML 559
Query: 465 TKK 467
K+
Sbjct: 560 DKR 562
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 2/225 (0%)
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G A+K + M G P+E ++ A++ C G+V+E L+A M GF + +T
Sbjct: 160 GSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATC 219
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ LC G+F + R ++E P+V +Y I+G CK +A +L+EM
Sbjct: 220 TVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVG 279
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAI-LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
RGLKP V++ + L + G +RA L LK + PN +Y +I G C +G++
Sbjct: 280 RGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCR-EGKL 338
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
E L+ RM+ G + Y+ L+ G+C+ G+ + ++ ++M
Sbjct: 339 ARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKM 383
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y ++G R + AE ++V++ + P+ +TYTT+I G+CK G + A ++
Sbjct: 322 VHTYTVMIGGYCREGKLARAEMLLVRMVEQGL-KPNTNTYTTLIGGHCKGGSFDRAFELM 380
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + PN+ YN +I+GFCKKG+++EA K + ++G + +++TY +I C
Sbjct: 381 NKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQ 440
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + A L +M NG ++ + S++ C + +++ + + + P ++Y
Sbjct: 441 GHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTY 500
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G+CK+G+S A+ + + M G ++ A+ L + L+ A L + M
Sbjct: 501 TSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLD 560
Query: 395 MDCLPNFVSYNTIICGLC 412
+P V+ T+ C
Sbjct: 561 KRLVPCEVTRVTLTFEYC 578
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 140/288 (48%), Gaps = 6/288 (2%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
++ + +P V T ++R + G A+KVFD MT V P+ ++ ++ C++G+
Sbjct: 137 MRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGK 196
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+EE + M G + T ++ LC GR + +M G NV + +
Sbjct: 197 VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTA 256
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL-LKEMRAR 360
+ GLC QA L ++ + P+V ++ +I+G CKIG ++ A L LK +++
Sbjct: 257 WIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSS 316
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
KP V ++ + G+L RA +LL +M + PN +Y T+I G C G
Sbjct: 317 SYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKG-GSFDR 375
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+L+++M + G + Y+ ++ G+C++G ++ ++ M T +G
Sbjct: 376 AFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR-MATSQG 422
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 139/286 (48%), Gaps = 9/286 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI + G+ A ++ KQ +Y+YN+++ + I+ A +
Sbjct: 361 TTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 420
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ + D TYT +I +CK G I A +FD M P++ AY ++I+ +C++ ++E
Sbjct: 421 QGL-KFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQME 479
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSM 302
E++K ++ + G P + TY +MI G C GR A + +M NG F D++ T+ ++
Sbjct: 480 ESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSI-TYGAL 538
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC + ++A +++ + P + + +C+ K+ A+S+L + R
Sbjct: 539 ISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKR-- 596
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
V + + V R L G++D A L LK++ D + +Y I
Sbjct: 597 -QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFI 641
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 99/247 (40%), Gaps = 20/247 (8%)
Query: 217 FDVMTVKPNLLA----YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
F + +P+L Y T F +G L A + M RG M+
Sbjct: 78 FRRLASRPDLRRLMRLYVTAATAFVARGSLPMAHEVM-----RG----------MVAAFG 122
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
GR+ EA ++ +MR +G V T +L+ G F A + A + PD +
Sbjct: 123 EAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDER 182
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
S+ ++ C+ GK +E +LL M G + V R L E G ++M
Sbjct: 183 SFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRM 242
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ PN V+Y I GLC + Q +++ M+ G + ++ L+ G C+ G
Sbjct: 243 LETGTPPNVVNYTAWIDGLCKRRYVKQAFH-VLEEMVGRGLKPNVYTHTTLIDGLCKIGW 301
Query: 453 VENVMQI 459
E ++
Sbjct: 302 TERAFRL 308
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ F + G+ EA ++ EMR+ GL V + N V R+ +E G A + M +
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ S+ ++ +C +G++++V+ L+ M R G +LD + +++ CE+G ++V
Sbjct: 177 VCPDERSFRALVV-VCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 235
Query: 457 MQIAHEMV 464
+ M+
Sbjct: 236 SEFFRRML 243
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 161/317 (50%), Gaps = 5/317 (1%)
Query: 153 ENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIEN 212
E +Y+YN L+ R L F ++++ + PDV +Y +I G+ K G ++
Sbjct: 113 EAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGL-GPDVFSYNALIDGFSKEGEVDK 171
Query: 213 AKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
A +F M + PN++ Y+++ING CK E+++A++ + +M+ G RPN +TYN +I+
Sbjct: 172 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIH 231
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G +G E+ + +M + +V S + LC G+ +A +++ P
Sbjct: 232 GYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP 291
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
DV SY +++G+ G +L M G+ P FN + G +D+++L+
Sbjct: 292 DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMF 351
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+ M + P+ ++++T+I C GR+ D + + MI +G D +YSCL++G C
Sbjct: 352 EDMTKQGVNPDIITFSTVISAFCRL-GRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 410
Query: 450 EGNVENVMQIAHEMVTK 466
++ ++ +M++K
Sbjct: 411 RRDLVKAKELISDMLSK 427
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 181/374 (48%), Gaps = 24/374 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY G + ++ F + + ++++++ R+ + A E F+ ++ +
Sbjct: 334 LINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI-DT 392
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMINGFCKKGELEE 244
VPPD + Y+ +I+G C + AK++ M K P + + ++IN CK+G + E
Sbjct: 393 GVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAE 452
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
K ++ +++ G RPN +T+N+++ G C+ G + EA L+ M G + ++ T+ +++
Sbjct: 453 GKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVD 512
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G C G+ D A+ R+++ + SY ++++G + ++ A + EM G+
Sbjct: 513 GYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAV 572
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
++ ++ V L N D A +LL+++ M+ + +++N +I + GR Q+ ++L
Sbjct: 573 SIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM-FKVGRRQEAKEL 631
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV---------------MQIAHE---MVTK 466
+ G Y ++ +E + E+ +I +E M+
Sbjct: 632 FAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLN 691
Query: 467 KGRLLKLKNFLTRV 480
KG + K N+L+++
Sbjct: 692 KGEVAKAGNYLSKI 705
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 150/309 (48%), Gaps = 5/309 (1%)
Query: 157 CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
C+ + S++ L + + ++ I+ P ++ T+ +++ GYC +G ++ A +
Sbjct: 433 CIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRP-NLITFNSLVDGYCLVGNMKEAVGL 491
Query: 217 FDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
D M V+P++ YNT+++G+CK G +++A +M+++ ++YN +++GL
Sbjct: 492 LDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQ 551
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
R AK + +M +G ++ T+ ++L GLC D+A L + N+ D+ +
Sbjct: 552 ARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILT 611
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+ +VI K+G+ EA L + GL PT+ ++ + L++ + A L M
Sbjct: 612 FNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 671
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ C P+ N II + + KG + + + ++ + G + T S L+ + G
Sbjct: 672 KSSCTPDSRILNEII-RMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKY 730
Query: 454 ENVMQIAHE 462
+++ E
Sbjct: 731 REYIKLLPE 739
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 39/283 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y GN+K A+ + + +Y+YN
Sbjct: 475 LVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYN-------------------------- 508
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEEA 245
T++ GYCK G I++A +F M K L +YN +++G + A
Sbjct: 509 ----------TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVA 558
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K+ +EM+ G + TY ++ GLC N DEA ML+ K+ K ++ T +++
Sbjct: 559 KEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRA 618
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+ VG+ +A + + P + +Y V+I K ++A +L M P
Sbjct: 619 MFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPD 678
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
N + R+L+ GE+ +A L ++ + LP + + +I
Sbjct: 679 SRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 721
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 151/278 (54%), Gaps = 4/278 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PD YT +I G+C+ G++ +A +V D M P+++ YNT++NG CK+ L +A+
Sbjct: 14 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+NEM RG P+ T+ +I+G CI G++D+A L M + ++ T+ +++ G+C
Sbjct: 74 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G D+A ++ + P+ +Y ++I+ C+ G+ ++A L EM +G+ P + +
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N++ + +G + + L++M P+ ++YNT+I G + + +M D L++ M
Sbjct: 194 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY-IKEDKMHDAFKLLNMM 252
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ D Y+ L+ G+ GNV+ I +M K
Sbjct: 253 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 290
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 155/276 (56%), Gaps = 5/276 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+LL L + + AE +++ +E VPPD+ T+TT+I GYC G ++ A ++FD
Sbjct: 53 TYNTLLNGLCKERRLLDAEGLLNEM-RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 111
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++P+++ YNT+I+G C++G+L++A ++M +R PN +TY+ +I C G+
Sbjct: 112 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQ 171
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++A + +M G N+ T+ S++KG C G + +L+ +M ++PD+ +Y
Sbjct: 172 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 231
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G+ K K +A LL M ++P V ++N + +G + A + ++M
Sbjct: 232 LIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG 291
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
P+ +Y ++I G A G ++ L D M++ G
Sbjct: 292 IEPDRYTYMSMINGHVTA-GNSKEAFQLHDEMLQRG 326
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 145/278 (52%), Gaps = 4/278 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PDV TY T++ G CK + +A+ + + M V P+L + T+I+G+C +G+L++A +
Sbjct: 49 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 108
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M+N+ RP+ +TYN +I G+C G +D+A L M N T+ ++ C
Sbjct: 109 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 168
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G+ + A G+L ++ + P++ +Y +I G+C+ G + L++M + P + +
Sbjct: 169 KGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLIT 228
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + ++ ++ A LL M + P+ V+YN +I G + G +Q+ + ++M
Sbjct: 229 YNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSV-HGNVQEAGWIFEKM 287
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G D Y ++ G+ GN + Q+ EM+ +
Sbjct: 288 CAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 325
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 135/244 (55%), Gaps = 1/244 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+ + Y +I GFC+ G + +A + +EM+ GC P+ +TYN ++ GLC R+ +A+ L
Sbjct: 14 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +MR G ++ T +++ G C+ GK D+A+ ++ + PD+ +Y +I+G C+
Sbjct: 74 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G D+A L +M +R + P +++ + E G+++ A L +M LPN ++
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
YN+II G C + G + + + +M+ + + D Y+ L+ GY +E + + ++ + M
Sbjct: 194 YNSIIKGYCRS-GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 252
Query: 464 VTKK 467
+K
Sbjct: 253 EKEK 256
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 1/219 (0%)
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ EM G P+ + Y +I G C G + +A + +M G +V T+ ++L GLC
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+ A G L + E + PD+ ++ +I+G+C GK D+A+ L M + L+P + +
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + + G+LD+A L M + PN V+Y+ +I C KG+++D +D M
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC-EKGQVEDAFGFLDEM 182
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
I G + Y+ ++KGYC GNV + +M+ K
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 221
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+ L+ ++ A F +++ + ++P ++ TY ++I+GYC+ G + +K
Sbjct: 158 TYSILIDSHCEKGQVEDAFGFLDEMINKGILP-NIMTYNSIIKGYCRSGNVSKGQKFLQK 216
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+L+ YNT+I+G+ K+ ++ +A K +N M +P+ +TYN +I G ++G
Sbjct: 217 MMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGN 276
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
V EA + KM G + + T+ SM+ G G +A +++ PD K
Sbjct: 277 VQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDK 332
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI------------------------ 351
+ YLR + + PD Y +VI GFC+ G +A+
Sbjct: 1 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60
Query: 352 -----------SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
LL EMR RG+ P + +F + G+LD+A+ L M P+
Sbjct: 61 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+YNT+I G+C +G + DL D M + YS L+ +CE+G VE+
Sbjct: 121 IVTYNTLIDGMC-RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFL 179
Query: 461 HEMVTK 466
EM+ K
Sbjct: 180 DEMINK 185
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
++ L+EMR GL P + V G + A+ + +M CLP+ V+YNT++ G
Sbjct: 1 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
LC + R+ D E L++ M G D ++ L+ GYC EG ++ +Q+ M+ ++ R
Sbjct: 61 LCKER-RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 118
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 177/349 (50%), Gaps = 8/349 (2%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
L++ + K+I+AY V A+I H+A + L+ + ++ A E
Sbjct: 13 LANGLLIKMIRAYPSPPVVLASI---HRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEV 69
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
++++ + P + +++ + + KV + M + P++ Y+T+I +C
Sbjct: 70 V-LMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYC 128
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K E + AKK + EM RGC N +TYN +I GLC +G V+EA M G +
Sbjct: 129 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGF 188
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ GLC + ++A L + A + P+V Y +I+GF + G +DEA ++KEM
Sbjct: 189 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 248
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
A G++P +++ + R L + G++DRA LLLKQM + P+ ++YN II G +
Sbjct: 249 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNK 308
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+D L+ M +G + + YS ++ G C+ G E + EM TK
Sbjct: 309 -KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 356
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 211/470 (44%), Gaps = 70/470 (14%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVR 170
++++S++ + +I+ + N K A F ++EN +Y+Y+ ++ L +
Sbjct: 283 MVRDSHRPDTITYNLIIEGHFRHHNKKDA---FRLLSEMENAGISPNVYTYSIMIHGLCQ 339
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLL 227
+ A + ++ + + P+ Y +I GYC+ G + A ++FD MT V P+L
Sbjct: 340 SGEPEKASDLLEEMTTKGL-KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLY 398
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
YN++I G K G +EE+ K +M RG PNE TY+ +I+G NG ++ A+ L+ +M
Sbjct: 399 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458
Query: 288 RLNGFKDN--------------------VSTHKSMLK---------------GLCVVGKF 312
G K N ST KSML L G
Sbjct: 459 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 518
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+ A L + + PDV Y +I+G CK ++A +L EM +G+ P + +NA+
Sbjct: 519 EAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 578
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L ++G++ A + + +PN V+Y ++I G C G + + L + M+ +G
Sbjct: 579 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV-GDISNAFYLYNEMLATG 637
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEM-----------------VTKKGRL---LK 472
D +YS L G G++E M + EM K+G++ LK
Sbjct: 638 ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLK 697
Query: 473 LKNFLTR---VVDALLLMWIVTGGSWISRFVFVHQVVV-IMERTVEDGKR 518
L + + V +AL + I++G S + VH + V + ++T E R
Sbjct: 698 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 747
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 173/365 (47%), Gaps = 46/365 (12%)
Query: 142 AIFWFHQAKQIENGACL----YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
A+ W + ++ GA + Y+Y++L+ +V A++ ++ +E + TY
Sbjct: 99 ALLW--KVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEM-RERGCGLNTVTY 155
Query: 198 TTMIRGYCKMGMIENA---KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+I G C+ G +E A KK + + P+ Y +ING CK EAK ++EM
Sbjct: 156 NVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC 215
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
+PN + Y +I G G DEA ++ +M G + N T+ ++++GLC +G+ D+
Sbjct: 216 AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDR 275
Query: 315 AV-----------------------GYLRN------------VMEANMNPDVKSYEVVIN 339
A G+ R+ + A ++P+V +Y ++I+
Sbjct: 276 ASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIH 335
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G C+ G+ ++A LL+EM +GLKP F + + G + A + +M +++ LP
Sbjct: 336 GLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 395
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ YN++I GL GR+++ +M G + YS L+ GY + G++E+ Q+
Sbjct: 396 DLYCYNSLIFGLSKV-GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQL 454
Query: 460 AHEMV 464
M+
Sbjct: 455 VQRML 459
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 148/293 (50%), Gaps = 8/293 (2%)
Query: 177 AEEFFHQIVKENV---VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYN 230
A+E F +++KE V V P+ TY ++RG CKMG ++ A + M + +P+ + YN
Sbjct: 238 ADEAF-KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 296
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+I G + ++A + ++EM N G PN TY+ MI+GLC +G ++A L+ +M
Sbjct: 297 LIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 356
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
G K N + ++ G C G A + + N+ PD+ Y +I G K+G+ +E+
Sbjct: 357 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 416
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+M+ RGL P F+++ + ++NG+L+ A L+++M PN V Y ++
Sbjct: 417 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 476
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ V M+ G LD +Y L+ GN+E ++ E+
Sbjct: 477 Y-FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEI 528
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 148/311 (47%), Gaps = 25/311 (8%)
Query: 162 NSLLGVLVR-VNSIKLAEEFFHQI--VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
N + G+L+ ++S E F + +++N PDV Y+++I G CK E A + D
Sbjct: 502 NRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD 561
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M+ V PN++ YN +I+G CK G++ A+ N ++ +G PN +TY ++I G C G
Sbjct: 562 EMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG 621
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ A L +M G + + + G G +QA+ +L M + + S+
Sbjct: 622 DISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM-FLIEEMFLRGHASISSFN 680
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++GFCK GK E + LL + RGL P + + L E G+L + ++ Q
Sbjct: 681 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 740
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
++++ + + +G++ D+VD MIR +C+EGN++
Sbjct: 741 TSESAARHFSSLFMDM-INQGKIP--LDVVDDMIRD---------------HCKEGNLDK 782
Query: 456 VMQIAHEMVTK 466
+ + +V K
Sbjct: 783 ALMLRDVIVAK 793
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 167/355 (47%), Gaps = 31/355 (8%)
Query: 113 SLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE-NGAC--LYSYNSLLGVLV 169
S+L L + LI GN++AA F +IE NG+ ++ Y+SL+ L
Sbjct: 492 SMLDQGVMLDNRIYGILIHNLSSSGNMEAA---FRVLSEIEKNGSVPDVHVYSSLISGLC 548
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNL 226
+ + A ++ K+ V P++ Y +I G CK G I A+ VF+ + K PN
Sbjct: 549 KTADREKAFGILDEMSKKGV-DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 607
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
+ Y ++I+G CK G++ A NEM+ G P+ Y+ + G G +++A L+ +
Sbjct: 608 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 667
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
M L G ++S+ +++ G C GK + + L +M + P+ + E +I+G + GK
Sbjct: 668 MFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGK 726
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE------------------LDRAILL 388
E ++ E++ + + F+++F ++ G+ LD+A++L
Sbjct: 727 LSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALML 786
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+ SY I+ LC KG++ + +L+ M + G NL T+ + L
Sbjct: 787 RDVIVAKSAPMGCSSYLAIVDNLC-RKGKLSEALNLLKEMDKRG-NLQPTLVALL 839
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 59/270 (21%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ L + I A F+ I+ + +VP + TYT++I G CK+G I NA +++ M
Sbjct: 575 YNALIDGLCKSGDISYARNVFNSILAKGLVP-NCVTYTSLIDGSCKVGDISNAFYLYNEM 633
Query: 221 ---TVKPNLLAY----------------------------------NTMINGFCKKGELE 243
+ P+ Y N +++GFCK+G+++
Sbjct: 634 LATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQ 693
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR--------------- 288
E K ++ +M RG PN LT +I GL G++ E + +++
Sbjct: 694 ETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLF 753
Query: 289 ---LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKI 344
+N K + M++ C G D+A+ LR+V+ A P SY +++ C+
Sbjct: 754 MDMINQGKIPLDVVDDMIRDHCKEGNLDKAL-MLRDVIVAKSAPMGCSSYLAIVDNLCRK 812
Query: 345 GKSDEAISLLKEMRARG-LKPTVFSFNAVF 373
GK EA++LLKEM RG L+PT+ + +F
Sbjct: 813 GKLSEALNLLKEMDKRGNLQPTLVALLGIF 842
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 9/244 (3%)
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
+ +++ + K G +++A + + M +RG P+ NA++ L R D A L+ K+R
Sbjct: 51 DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLL---RAD-AMALLWKVRE 106
Query: 290 ----NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
G +V T+ ++++ C V +FD A L + E + +Y V+I G C+ G
Sbjct: 107 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 166
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+EA K+M GL P F++ A+ L ++ + A LL +M + PN V Y
Sbjct: 167 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 226
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+I G M +G + ++ M+ +G + Y L++G C+ G ++ + +MV
Sbjct: 227 NLIDGF-MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVR 285
Query: 466 KKGR 469
R
Sbjct: 286 DSHR 289
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 183/390 (46%), Gaps = 14/390 (3%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
PN Y C+ + L H + +LK ++ I++L+ D V A
Sbjct: 92 PNRCTYSILIGCFCRMGH--LEHGFAAFGL-ILKTGWRMDHIVINQLLNGLCDGKRVGEA 148
Query: 143 IFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTY 197
+ Q ++ C+ SYN LL L + A E H + + V PP+V +Y
Sbjct: 149 MDVLLQ--RMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSY 206
Query: 198 TTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMN 254
+T+I G+ G ++ +F M + P+++ Y T+I+G CK + A+ +M++
Sbjct: 207 STVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMID 266
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
G +PN TYN +I+G G+ E ++ +M G K N T+ S+L LC G+ +
Sbjct: 267 NGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCRE 326
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A + +++ + P V +Y ++++G+ G E LL M A G+ P FN F
Sbjct: 327 ARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFS 386
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
+ G +D+A+ + +M Q P+ VSY +I LC GR+ D E ++MI G
Sbjct: 387 AYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKL-GRVDDAEVKFNQMINEGVT 445
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D ++S L+ G C E V ++ EM+
Sbjct: 446 PDIVVFSSLVYGLCTVDKWEKVEELFFEML 475
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 199/425 (46%), Gaps = 47/425 (11%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLS--HSLIS--IAASLLKNSNKLSDFF 125
A FFF+ P+ + + T LS H L++ +A + N + + FF
Sbjct: 326 EARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFF 385
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
AY G + A+ F++ +Q SY +L+ L ++ + AE F+Q++
Sbjct: 386 -----SAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440
Query: 186 KENVVP----------------------------------PDVSTYTTMIRGYCKMGMIE 211
E V P P++ + T++ CK G +
Sbjct: 441 NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 500
Query: 212 NAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
+++ D M V+P++++YNT+I+G C G ++EA K + M++ G +P+ +YN ++
Sbjct: 501 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
+G C GR+D A KM NG V T+ ++L GL +F +A N++ +
Sbjct: 561 HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 620
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
D+ +Y +++NG CK DEAI + + + ++GL+ + +FN + L++ G + A+ L
Sbjct: 621 WDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 680
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+P + N V+Y ++ L + +G +++ + L M ++G + M + L++
Sbjct: 681 FAAIPANGLVQNVVTYRLVVENL-IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 739
Query: 449 EEGNV 453
G++
Sbjct: 740 HRGDI 744
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 172/378 (45%), Gaps = 43/378 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
L+K + + A+ H + +C + SY++++ + F +++
Sbjct: 171 LLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMM 230
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+ PPDV TYTT+I G CK + + A+ VF M VKPN+ YN +I+G+ G+
Sbjct: 231 DRGI-PPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKW 289
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+E + + EM G +PN TY +++ LC NGR EA+ M G K +V+T+ M
Sbjct: 290 KEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIM 349
Query: 303 LKGLCVVGKF-----------------------------------DQAVGYLRNVMEANM 327
L G G D+A+ + + +
Sbjct: 350 LHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGL 409
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+PD SY +I+ CK+G+ D+A +M G+ P + F+++ L + ++
Sbjct: 410 SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEE 469
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L +M + PN V +NTI+C LC +GR+ + + LVD + G D Y+ L+ G+
Sbjct: 470 LFFEMLNVGIHPNIVFFNTILCNLC-KEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 528
Query: 448 CEEGNVENVMQIAHEMVT 465
C G ++ ++ MV+
Sbjct: 529 CLAGTIDEASKLLEGMVS 546
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 181/411 (44%), Gaps = 59/411 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y SLL L + + A FF ++ + + P V+TY M+ GY G + + ++
Sbjct: 310 TYGSLLNYLCKNGRCREARFFFDSMIGKGI-KPSVTTYGIMLHGYATKGALSEMHDLLNL 368
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + PN +N + + K G +++A N+M +G P+ ++Y A+I LC GR
Sbjct: 369 MVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGR 428
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA---------VGYLRN------ 321
VD+A++ +M G ++ S++ GLC V K+++ VG N
Sbjct: 429 VDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNT 488
Query: 322 ----------VMEA----------NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
VME + PDV SY +I+G C G DEA LL+ M + G
Sbjct: 489 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 548
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
LKP FS+N + + G +D A ++M P V+YNTI+ GL K R +
Sbjct: 549 LKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTK-RFSEA 607
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK------------GR 469
++L MI SG D Y+ +L G C+ V+ +++ + +K G
Sbjct: 608 KELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGA 667
Query: 470 LLKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQVVVIMERTVEDGKRSE 520
LLK R DA+ L + + V VV E +E+G E
Sbjct: 668 LLKGG----RKEDAMDLFAAIPANGLVQNVVTYRLVV---ENLIEEGSLEE 711
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 166/359 (46%), Gaps = 52/359 (14%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEE-------FFHQIVKENV--VPPDVSTYTTMIRGYCK 206
A + ++N LL + R + + F+++V++ V P+ TY+ +I +C+
Sbjct: 47 ASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCR 106
Query: 207 MGMIE-----------------------------NAKKVFDVMTV----------KPNLL 227
MG +E + K+V + M V P+ +
Sbjct: 107 MGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTV 166
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNR---GCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+YN ++ G C + EEA + ++ M + C PN ++Y+ +I G G+VD+ L
Sbjct: 167 SYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLF 226
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M G +V T+ +++ GLC FD+A + +++ + P++ +Y +I+G+ I
Sbjct: 227 LEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSI 286
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
GK E + +L+EM A G KP ++ ++ L +NG A M P+ +Y
Sbjct: 287 GKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTY 346
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ G KG + ++ DL++ M+ +G + + +++ Y + G ++ M I ++M
Sbjct: 347 GIMLHGYA-TKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKM 404
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 5/251 (1%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
+ V PN Y+ +I FC+ G LE ++ G R + + N ++ GLC RV E
Sbjct: 88 IKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGE 147
Query: 280 A-KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM---NPDVKSYE 335
A +L+ +M G + ++ +LKGLC + ++A+ L + + + P+V SY
Sbjct: 148 AMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYS 207
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
VINGF G+ D+ +L EM RG+ P V ++ V L + DRA + +QM
Sbjct: 208 TVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDN 267
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
PN +YN +I G ++ G+ ++V +++ M G + Y LL C+ G
Sbjct: 268 GVKPNIDTYNCLIHGY-LSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCRE 326
Query: 456 VMQIAHEMVTK 466
M+ K
Sbjct: 327 ARFFFDSMIGK 337
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 4/238 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN+L+ +I A + +V + PD +Y T++ GYCK G I++A F
Sbjct: 520 SYNTLIDGHCLAGTIDEASKLLEGMVSVGL-KPDSFSYNTLLHGYCKAGRIDSAYSHFRK 578
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P ++ YNT+++G + EAK+ M+N G + + TYN ++ GLC +
Sbjct: 579 MLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNC 638
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA + + G + N+ T M+ L G+ + A+ + + +V +Y +
Sbjct: 639 VDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRL 698
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+ + G +E SL M G P NA+ R L+ G++ RA L ++ +
Sbjct: 699 VVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 756
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 151/352 (42%), Gaps = 16/352 (4%)
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLA 177
K F + L+ Y G + +A + H K + NG + +YN++L L + A
Sbjct: 550 KPDSFSYNTLLHGYCKAGRIDSA--YSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 607
Query: 178 EEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMIN 234
+E + ++ D+ TY ++ G CK ++ A K+F + K N++ +N MI
Sbjct: 608 KELYLNMINSGT-KWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIG 666
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
K G E+A + G N +TY ++ L G ++E L + M NG
Sbjct: 667 ALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAP 726
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N ++++ L G +A YL + E N + + + ++I+ F A SL
Sbjct: 727 NSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLP 786
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
K+ R + RI D A L ++M P+ V+YNTI+ GL
Sbjct: 787 KKYRILNEANSSALIKKARRI-------DDAYSLFREMLMKGLTPDVVTYNTILHGL-FQ 838
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GR + ++L MI S ++ Y+ +L G C+ V+ ++ + +K
Sbjct: 839 TGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSK 890
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 145/325 (44%), Gaps = 33/325 (10%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N ++G L++ + A + F I +V +V TY ++ + G +E +F
Sbjct: 660 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVQ-NVVTYRLVVENLIEEGSLEEFDSLFSA 718
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING- 275
M PN N ++ +G++ A ++++ R T + +I +
Sbjct: 719 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEY 778
Query: 276 ---------------------------RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
R+D+A L +M + G +V T+ ++L GL
Sbjct: 779 QHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQ 838
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G+F +A +++ + ++ +Y +++NG CK DEA + + + ++GL+ + +
Sbjct: 839 TGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIIT 898
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
FN + L++ G + A+ L +P +P+ V+Y + L + +G +++ + L M
Sbjct: 899 FNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENL-IEEGSLEEFDGLFLTM 957
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNV 453
+SG LD + + L++ + G++
Sbjct: 958 EKSGTPLDSRLLNALVRRLLQRGDI 982
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 3/188 (1%)
Query: 210 IENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
I++A +F M +K P+++ YNT+++G + G EAK+ M+N + N TYN
Sbjct: 807 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
++ GLC + VDEA + + G + N+ T M+ L G+ + A+ +
Sbjct: 867 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 926
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PDV +Y +V + G +E L M G NA+ R L++ G++ RA
Sbjct: 927 LVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAG 986
Query: 387 LLLKQMPQ 394
L ++ +
Sbjct: 987 AYLSKLDE 994
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 4/202 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L L + A+E + ++ ++ TY ++ G CK ++ A K+F
Sbjct: 828 TYNTILHGLFQTGRFSEAKELYLSMINSRT-QMNIYTYNIILNGLCKSNCVDEAFKMFQS 886
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ K N++ +N MI K G E+A + G P+ +TY + L G
Sbjct: 887 LCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGS 946
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++E L M +G + ++++ L G +A YL + E N + + +
Sbjct: 947 LEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSE 1006
Query: 337 VINGFCKIGKSDEAISLLKEMR 358
+I+ F + A SL ++ R
Sbjct: 1007 LISLFSRGEYQHHAKSLPEKYR 1028
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 153/298 (51%), Gaps = 20/298 (6%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
V ++ P++ Y T+I CK + +A ++ M K P++ YN +INGFC G+
Sbjct: 232 VDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGK 291
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L++A N+M + P+ T+N ++ C GRV EAK +A M G K +V T+ S
Sbjct: 292 LKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNS 351
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ C+V + ++A + + +V+SY ++IN FCKI D+A+ L KEM +
Sbjct: 352 LMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQ 411
Query: 362 LKPTVFSFNAVFRILVENGELDRA----------------ILLLKQMPQMDCLPNFVSYN 405
+ P V +++++ L ++G + A I L +Q+ PN +Y
Sbjct: 412 IFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYT 471
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+I GLC GR++D ++ + ++ G+N+ Y+ ++ G+C +G + M + +M
Sbjct: 472 ILIDGLCKG-GRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKM 528
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 142/276 (51%), Gaps = 20/276 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + G +K AI F++ +Y++N L+ + +K A+ ++K+
Sbjct: 282 LINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG 341
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ PDV TY +++ YC + + AK +F+ M+ V N+ +Y+ MIN FCK +++A
Sbjct: 342 I-KPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQA 400
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRV-------DEAK---------MLMAKMRL 289
K EM ++ PN +TY+++I GLC +GR+ DE L +++
Sbjct: 401 MKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKD 460
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G + N+ T+ ++ GLC G+ + A +++ N V +Y V+I+GFC G DE
Sbjct: 461 QGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDE 520
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
A++LL +M+ P ++ + R L +N E D+A
Sbjct: 521 AMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKA 556
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 137/271 (50%), Gaps = 20/271 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ V +K A F+++ EN+ PDV T+ ++ +CK G ++ AK +
Sbjct: 278 TYNALINGFCIVGKLKDAIGLFNKMTSENI-NPDVYTFNILVDAFCKEGRVKEAKNGLAM 336
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KP+++ YN++++ +C E+ +AK N M +RG N +Y+ MI C
Sbjct: 337 MMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKM 396
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA----------------VGYLR 320
VD+A L +M NV T+ S++ GLC G+ A + R
Sbjct: 397 VDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTR 456
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ + + P++ +Y ++I+G CK G+ ++A ++ +++ +G TV ++ + G
Sbjct: 457 QLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKG 516
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
D A+ LL +M C+PN V+Y II L
Sbjct: 517 LFDEAMTLLSKMKDNCCIPNAVTYEIIIRSL 547
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 133/311 (42%), Gaps = 43/311 (13%)
Query: 46 LDQFSLCLGSNIVTKVIYEQTNPYHALF--------------FFNWASNPNPNPNKYHHT 91
LD + L S +V+K I+ N Y+AL FN ++ N NP+ Y
Sbjct: 256 LDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVY--- 312
Query: 92 TPCYTAITDVLLSHSLISIA----ASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
+ + D + A A ++K K + L+ Y V A F+
Sbjct: 313 --TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFN 370
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
A + SY+ ++ ++ + A + F ++ + + P +V TY+++I G CK
Sbjct: 371 TMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFP-NVITYSSLIDGLCKS 429
Query: 208 GMIENAKKVFDVMT-------------------VKPNLLAYNTMINGFCKKGELEEAKKC 248
G I A ++ D M ++PN+ Y +I+G CK G LE+A+
Sbjct: 430 GRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNI 489
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+++ +G TY MI+G C G DEA L++KM+ N N T++ +++ L
Sbjct: 490 FEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFD 549
Query: 309 VGKFDQAVGYL 319
+ D+A +
Sbjct: 550 NDENDKAENFF 560
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNT---MINGFCKKGE 241
+K+ + P++ TYT +I G CK G +E+A+ +F+ + VK + NT MI+GFC KG
Sbjct: 458 LKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGL 517
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
+EA +++M + C PN +TY +I L N D+A+ K
Sbjct: 518 FDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFFVK 562
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 5/155 (3%)
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
LR V + P++ Y +I+ CK ++A L EM ++ + P V ++NA+
Sbjct: 229 LRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCI 288
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
G+L AI L +M + P+ ++N ++ C +GR+++ ++ + M++ G D
Sbjct: 289 VGKLKDAIGLFNKMTSENINPDVYTFNILVDAFC-KEGRVKEAKNGLAMMMKQGIKPDVV 347
Query: 439 MYSCLLKGYCEEGNVENVMQI----AHEMVTKKGR 469
Y+ L+ YC V I +H VT R
Sbjct: 348 TYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVR 382
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 18/155 (11%)
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+ LL+ + + L+P + +N + + ++ + A L +M P+ +YN +I G
Sbjct: 226 LQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALING 285
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
C+ G+++D L ++M N D ++ L+ +C+E GR+
Sbjct: 286 FCIV-GKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKE-----------------GRV 327
Query: 471 LKLKNFLTRVVDALLLMWIVTGGSWISRFVFVHQV 505
+ KN L ++ + +VT S + R+ V++V
Sbjct: 328 KEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEV 362
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 198/429 (46%), Gaps = 18/429 (4%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKA 141
+PN Y+ ++ VL++ L++ S + N ++ + LI + GN K
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT---FNALIDGHISEGNFKE 351
Query: 142 AI--FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTT 199
A+ F+ +AK + SY LL L + LA F+ ++ K N V TYT
Sbjct: 352 ALKMFYMMEAKGLTPSEV--SYGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGRITYTG 408
Query: 200 MIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
MI G CK G ++ A + + M+ + P+++ Y+ +INGFCK G + AK+ + + G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
PN + Y+ +IY C G + EA + M L G + T ++ LC GK +A
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
++R + + P+ S++ +ING+ G+ +A S+ EM G PT F++ ++ + L
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ G L A LK + + + V YNT++ +C + G + L M++ D
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS-GNLAKAVSLFGEMVQRSILPD 647
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWI 496
Y+ L+ G C +G + A E +G +L K T VD + G W
Sbjct: 648 SYTYTSLISGLCRKGKTVIAILFAKE-AEARGNVLPNKVMYTCFVDGMF-----KAGQWK 701
Query: 497 SRFVFVHQV 505
+ F Q+
Sbjct: 702 AGIYFREQM 710
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 158/340 (46%), Gaps = 5/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G+ + + + + ++ + +YN++L + K A E + K
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM-KSK 257
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
V DV TY +I C+ I + M + PN + YNT+INGF +G++ A
Sbjct: 258 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 317
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +NEM++ G PN +T+NA+I G G EA + M G + ++ +L G
Sbjct: 318 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 377
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +FD A G+ + + +Y +I+G CK G DEA+ LL EM G+ P
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +++A+ + G A ++ ++ ++ PN + Y+T+I C G +++ +
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM-GCLKEAIRIY 496
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ MI GH D ++ L+ C+ G V + M +
Sbjct: 497 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 164/342 (47%), Gaps = 9/342 (2%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
F+ + KA G KA I++ Q + + + + N+++ R+ I+ + ++
Sbjct: 690 FVDGMFKA----GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+N P+++TY ++ GY K + + ++ + + P+ L ++++ G C+
Sbjct: 746 GNQNG-GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 804
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
LE K + + RG + T+N +I C NG ++ A L+ M G + T +
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
M+ L +F ++ L + + ++P+ + Y +ING C++G A + +EM A
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P + +A+ R L + G+ D A LLL+ M +M +P S+ T++ LC G + +
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM-HLCCKNGNVIEA 983
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+L M G LD Y+ L+ G C +G++ ++ EM
Sbjct: 984 LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 133/307 (43%), Gaps = 39/307 (12%)
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVM---------------------------------- 220
S Y +IR Y + GMI+++ ++F +M
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183
Query: 221 ----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ P++ +N +IN C +G E++ M +M G P +TYN +++ C GR
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
A L+ M+ G +V T+ ++ LC + + LR++ + ++P+ +Y
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+INGF GK A LL EM + GL P +FNA+ + G A+ + M
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ VSY ++ GLC RM R+G + Y+ ++ G C+ G ++
Sbjct: 364 LTPSEVSYGVLLDGLC-KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422
Query: 457 MQIAHEM 463
+ + +EM
Sbjct: 423 VVLLNEM 429
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 5/321 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I Y G ++ + G L +YN LL + + + + I+ N
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL-N 783
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ PD T +++ G C+ M+E K+ F V+ + +N +I+ C GE+ A
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M + G ++ T +AM+ L N R E++M++ +M G + ++ G
Sbjct: 844 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 903
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC VG A ++ + P + ++ K GK+DEA LL+ M L PT
Sbjct: 904 LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 963
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ SF + + +NG + A+ L M + VSYN +I GLC AKG M +L
Sbjct: 964 IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC-AKGDMALAFELY 1022
Query: 426 DRMIRSGHNLDFTMYSCLLKG 446
+ M G + T Y L++G
Sbjct: 1023 EEMKGDGFLANATTYKALIRG 1043
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 12/315 (3%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+++N L+ L + + AEEF + + ++P VS + +I GY G A VFD
Sbjct: 509 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS-FDCLINGYGNSGEGLKAFSVFD 567
Query: 219 VMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
MT P Y +++ G CK G L EA+K + + + + YN ++ +C +G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV-MEANMNPDVKSY 334
+ +A L +M + T+ S++ GLC GK A+ + + N+ P+ Y
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++G K G+ I ++M G P + + NA+ G++++ LL +M
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ PN +YN ++ G + +DV L +I +G D L+ G CE
Sbjct: 748 QNGGPNLTTYNILLHGY----SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 803
Query: 452 NVENVMQIAHEMVTK 466
+E ++I + +
Sbjct: 804 MLEIGLKILKAFICR 818
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 156/352 (44%), Gaps = 14/352 (3%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F L+K G+++ A + + YN+LL + + ++ A F +
Sbjct: 579 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 638
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMG----MIENAKKVFDVMTVKPNLLAYNTMINGFCKK 239
+V+ +++P D TYT++I G C+ G I AK+ V PN + Y ++G K
Sbjct: 639 MVQRSILP-DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 697
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G+ + +M N G P+ +T NAMI G G++++ L+ +M N++T+
Sbjct: 698 GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTY 757
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+L G + R+++ + PD + ++ G C+ + + +LK
Sbjct: 758 NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 817
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA----K 415
RG++ ++FN + NGE++ A L+K M + +S + C ++
Sbjct: 818 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG-----ISLDKDTCDAMVSVLNRN 872
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
R Q+ ++ M + G + + Y L+ G C G+++ + EM+ K
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 9/215 (4%)
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
R C N Y+ +I G + ++ + M L GF +V T ++L + G+
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
+L+ +++ + PDV ++ ++IN C G +++ L+++M G PT+ ++N V
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC----MAKGRMQDVEDLVDRMIR 430
+ G AI LL M + +YN +I LC +AKG + + D+ RMI
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL-LRDMRKRMIH 295
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
Y+ L+ G+ EG V Q+ +EM++
Sbjct: 296 PNE----VTYNTLINGFSNEGKVLIASQLLNEMLS 326
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
+ P Y +ING C+ G+++ A EM+ P + +AM+ L G+ DEA
Sbjct: 890 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME-ANMNPDVKSYEVVING 340
+L+ M +++ +++ C G +A+ LR VM + D+ SY V+I G
Sbjct: 950 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL-ELRVVMSNCGLKLDLVSYNVLITG 1008
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR-ILVENGELDRAILLLKQM 392
C G A L +EM+ G ++ A+ R +L A ++LK +
Sbjct: 1009 LCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDL 1061
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 184/400 (46%), Gaps = 55/400 (13%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI- 184
++ LI Y + G + A + + + + +YN+LL + + AE F++I
Sbjct: 235 LNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEIL 294
Query: 185 --------------VKENVVP---PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
V +N + P + TYTT+I YCK +E + ++ M + P
Sbjct: 295 GFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMP 354
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+++ ++++ GFC+ G+L EA EM G PN ++Y +I L +GRV EA L
Sbjct: 355 DVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQ 414
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
++M + G ++ T +++ GL VGK +A +++ N+ P+ +Y +++G+CK+
Sbjct: 415 SQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKL 474
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
GK + A +L++M + P V +F+++ + G L +A+ +L++M Q + +PN + Y
Sbjct: 475 GKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVY 534
Query: 405 NTIICGLCMAK----------------------------------GRMQDVEDLVDRMIR 430
+I G A GRM + L+ M
Sbjct: 535 AILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYS 594
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
G + D Y+ L+ GY +EGN + I EM K R
Sbjct: 595 KGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRF 634
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 158/321 (49%), Gaps = 22/321 (6%)
Query: 175 KLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG----------MIENAKKVFDVMTVKP 224
+LA Q +KE + DV Y +I+G ++G MIE + + P
Sbjct: 617 QLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIE--------LGLAP 668
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+ + YNT+IN +C KG+ E+A +NEM + G PN +TYN +I GLC G V++A+ +
Sbjct: 669 DCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESAL 728
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M + F THK ++K K D+ + ++ + + + Y +I FC++
Sbjct: 729 DEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRL 788
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G + +A +L EM RG+ + ++NA+ R +++A+ QM PN +Y
Sbjct: 789 GMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTY 848
Query: 405 NTIICGLCMA---KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
NT++ GL A + M++ E LV M G + Y L+ GY GN + + +
Sbjct: 849 NTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHI 908
Query: 462 EMVTKKGRLLKLKNFLTRVVD 482
EM+T KG + LK + + D
Sbjct: 909 EMIT-KGFVPTLKTYNVLISD 928
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 199/457 (43%), Gaps = 105/457 (22%)
Query: 106 SLISIAASLLKNSNKLSDFFI-----SKLIKAYGDRGNVKAAI--------FWFHQAK-- 150
L+S A L++NS + SD I + L+KA+ G++ A FW + +
Sbjct: 246 GLMSQATELIENSWR-SDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLK 304
Query: 151 --------QIEN-GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
+I+N L +Y +L+ + ++ + + +++ N + PDV T ++++
Sbjct: 305 NNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIM-NGIMPDVVTCSSIL 363
Query: 202 RGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
G+C+ G + A +F M + PN ++Y T+IN K G + EA ++M+ RG
Sbjct: 364 YGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGIS 423
Query: 259 -----------------------------------PNELTYNAMIYGLCINGRVDEAKML 283
PN +TY+A++ G C G+++ A+++
Sbjct: 424 FDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELV 483
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ KM NV T S++ G G +AV LR +++ N+ P+ Y ++I+G+ K
Sbjct: 484 LQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFK 543
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCLP 399
G+ D A KEM++R L+ + N +F IL+ N G +D A L+ M P
Sbjct: 544 AGEQDVADDFCKEMKSRRLEES----NVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDP 599
Query: 400 NFVSYNTIICGL-----------------------------CMAKGRMQ----DVEDLVD 426
+ V+Y ++I G + KG ++ D +
Sbjct: 600 DIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCS 659
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
RMI G D Y+ ++ YC +G E+ + I +EM
Sbjct: 660 RMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEM 696
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 149/292 (51%), Gaps = 14/292 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I Y +G + A+ ++ K +YN L+G L + +++ AE +++
Sbjct: 676 IINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVME 735
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT------VKPNLLAYNTMINGFCKKGEL 242
VP + T+ +++ Y + E A K+ + ++ +L YNT+I FC+ G
Sbjct: 736 FVPTPI-THKFLVKAYSRS---EKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMT 791
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+AK ++EM+ RG + +TYNA+I G C V++A ++M ++G N++T+ ++
Sbjct: 792 RKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTL 851
Query: 303 LKGLCVVGKFDQAVGYLRNVM----EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
L GL G ++ + ++ E + P+ +Y+++++G+ ++G + I L EM
Sbjct: 852 LGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMI 911
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+G PT+ ++N + ++G++ A LL + +PN +Y+ + CG
Sbjct: 912 TKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 963
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 176/418 (42%), Gaps = 63/418 (15%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y GN AA+ + K+ + +YN+L+ L+R+ K + +
Sbjct: 605 ASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLG--KYDPRYVCSRMI 662
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
E + PD TY T+I YC G E+A + + M + PN + YN +I G CK G +E
Sbjct: 663 ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVE 722
Query: 244 EAKKCMNEMMNRGCRPNELT-----------------------------------YNAMI 268
+A+ ++EM+ P +T YN +I
Sbjct: 723 KAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLI 782
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
C G +AK+++ +M G ++ T+ ++++G C ++A+ + +
Sbjct: 783 TVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIA 842
Query: 329 PDVKSYEVVINGFCKIG----KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
P++ +Y ++ G G +E L+ EM RGL P +++ + G +
Sbjct: 843 PNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKK 902
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
I+L +M +P +YN +I + G+M + +L++ ++ G + Y L
Sbjct: 903 TIILHIEMITKGFVPTLKTYNVLISDYAKS-GKMIEARELLNDLLTKGRIPNSFTYDILT 961
Query: 445 KGYCE---EGNVENVMQIAHEM---------------VTKKGRLLKLKNFLTRVVDAL 484
G+ E ++ ++ ++E+ +KK + +LK F +VDAL
Sbjct: 962 CGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGLKFSKKAEIRRLKIFPHWMVDAL 1019
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 166/404 (41%), Gaps = 57/404 (14%)
Query: 85 PNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIF 144
P K H + + + L+H S A++ + L G V F
Sbjct: 52 PTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRAL---------------GLVPTLPF 96
Query: 145 WFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
W LY +N+ LV + ++ F +V PDV + ++
Sbjct: 97 W---------NTLLYQFNA--SGLVSQVKLMYSDMLFCGVV------PDVFSVNVLVHSL 139
Query: 205 CKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
CK+G ++ A DV+ + + YNT+I GFC+KG +++ ++EM+ RG +
Sbjct: 140 CKVGDLDLALGYLRNNDVVDIDN--VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDS 197
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+T N ++ G C G V A+ +M + G +V +++ G C G QA + N
Sbjct: 198 ITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIEN 257
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM-------------------RARGL 362
+++ D+ +Y ++ FCK G A SL E+ + L
Sbjct: 258 SWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNL 317
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+PT+ ++ + + ++ + L K+M +P+ V+ ++I+ G C G++ +
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFC-RHGKLTEAA 376
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L M G + + Y+ ++ + G V + +MV +
Sbjct: 377 VLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVR 420
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 184/346 (53%), Gaps = 13/346 (3%)
Query: 101 VLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--- 157
V++S+S+I A + ++ D F ++ ++ W +AK++ N
Sbjct: 241 VVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW-EEAKRLFNEMVNQG 299
Query: 158 ----LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA 213
+ ++N L+ VL + + A++ +++ +VP ++ TY ++I G+C +G + +A
Sbjct: 300 VQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP-NLLTYNSLIEGFCLVGDLNSA 358
Query: 214 KKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+++F M K P+++ Y +ING+CK ++EEA K N M+ G RP+ TY A++ G
Sbjct: 359 RELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTG 418
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
L G+V +AK L M++ G ++ + L GLC G +A+ + N+ D
Sbjct: 419 LFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLD 478
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
++ + +I+G CK GK + A L +++ L+P V ++N + G++ +A +L +
Sbjct: 479 IECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQ 538
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+M + C P+ ++Y T+I G +K +++ V +L+ M++ +LD
Sbjct: 539 KMEKNGCTPDKITYATLIRGFFESK-KLEKVVELLHMMVQRDVSLD 583
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 159/294 (54%), Gaps = 7/294 (2%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
A+ F+++V + V P+V T+ +I CK G + AK + +VM + PNLL YN++I
Sbjct: 288 AKRLFNEMVNQGV-QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 346
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
GFC G+L A++ M ++GC P+ + Y +I G C +V+EA L M G +
Sbjct: 347 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 406
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-DVKSYEVVINGFCKIGKSDEAIS 352
+V T+ ++L GL GK A L VM+ P D+ Y + +NG CK G EA+
Sbjct: 407 PDVKTYGALLTGLFQGGKVGDA-KKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 465
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
L ++++ +K + FN + L + G+L+ A L +++PQ + P+ V+YN +I C
Sbjct: 466 LFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFC 525
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G++ L +M ++G D Y+ L++G+ E +E V+++ H MV +
Sbjct: 526 RG-GQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 578
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 141/352 (40%), Gaps = 74/352 (21%)
Query: 191 PPDVSTYTTMIRGYCKMGMIE--NAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
P +M CK G I A + F +M P L ++ +++G K +
Sbjct: 56 PISFQQQLSMFLHNCKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQV 115
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
N+M G P+ T N ++ LC RV E +MA + G+ ++ T+ +++KG
Sbjct: 116 FYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKG 175
Query: 306 LCVVGKFDQAV-----------------------GYLR------------------NVME 324
LC+ + +A G R ++
Sbjct: 176 LCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYG 235
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS---------------- 368
N P V SY ++I+ CK + DEA L +EM+ +G+ PTV S
Sbjct: 236 INFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEM 295
Query: 369 -----------FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
FN + +L + G++ A LL+ M Q +PN ++YN++I G C+ G
Sbjct: 296 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLV-GD 354
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+ +L M G D Y+ L+ GYC+ VE M++ + M+ R
Sbjct: 355 LNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 406
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 107/206 (51%), Gaps = 4/206 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y V+ A+ ++ Q+ + +Y +LL L + + A++ F ++K
Sbjct: 380 LINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF-GVMKVY 438
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+P D+ Y + G CK G + A ++F+ + +K ++ +N +I+G CK G+LE A
Sbjct: 439 GIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETA 498
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ +P+ +TYN MI+ C G+V +A +L KM NG + T+ ++++G
Sbjct: 499 WELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRG 558
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDV 331
K ++ V L +++ +++ DV
Sbjct: 559 FFESKKLEKVVELLHMMVQRDVSLDV 584
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 162/322 (50%), Gaps = 17/322 (5%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEE 179
+ F ++ L+ G V AA + K++ + L SYN L L + + I A
Sbjct: 106 TTFIVNMLVSCLCKNGKVDAA---YELYKRLSDECSLDRISYNMLTYGLCKADQIDRALA 162
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM-------TVKPNLLAYNTM 232
F ++ +EN V P + TY ++ GYC+ G +E A + + M V P++ +YNT+
Sbjct: 163 VFGEM-EENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTV 221
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
I+GFCK +L A+ + M+ GC PN +T+N ++ GLC+ G++DEA + M
Sbjct: 222 ISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNC 281
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ T+ ++ G + D+A Y +++ + P+V +Y +I G C K ++A+
Sbjct: 282 EPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALE 341
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM---PQMDCLPNFVSYNTIIC 409
+LK M + G +P V ++ V L + G+++RA L C P+ +Y+TII
Sbjct: 342 ILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIY 401
Query: 410 GLCMAKGRMQDVEDLVDRMIRS 431
LC ++ E + RM+ S
Sbjct: 402 WLCRQSKFLEAYEYFL-RMVES 422
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 170/343 (49%), Gaps = 12/343 (3%)
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
A+Q + +++YN+ L LV+ A + F ++ + +P ++ TY ++RG C
Sbjct: 28 ARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLP-NIYTYGIVLRGLCDDA 86
Query: 209 MIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+ A ++ M K P N +++ CK G+++ A + + + C + ++YN
Sbjct: 87 KTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDE-CSLDRISYN 145
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME- 324
+ YGLC ++D A + +M N ++ T+ +L G C G+ +QA+ L ++E
Sbjct: 146 MLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEG 205
Query: 325 ---ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+++ PD+ SY VI+GFCK + A +L+ M G P V +FN + L G+
Sbjct: 206 KKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGK 265
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
LD A + + M + +C P V+Y +I G A R+ D M+R G + Y+
Sbjct: 266 LDEANAMFEYMVERNCEPTAVTYTVLITGHARAL-RIDKANDYFVDMLRRGVEPNVYTYT 324
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
L+ G C+ VE+ ++I M + GR + + TRV+ AL
Sbjct: 325 ALIGGLCDANKVEDALEILKRM-SSTGREPNVVTY-TRVIGAL 365
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+LL L + A F +V+ N P V TYT +I G+ + I+ A F
Sbjct: 252 TFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAV-TYTVLITGHARALRIDKANDYFVD 310
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V+PN+ Y +I G C ++E+A + + M + G PN +TY +I LC G+
Sbjct: 311 MLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQ 370
Query: 277 VDEAKMLMAKM---RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
++ A L R K + + +++ LC KF +A Y ++E+ +
Sbjct: 371 IERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHI 430
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLK 363
Y+ + +G + ++++ + E A G++
Sbjct: 431 YKAMADGLELVQETEKVERVCLEASAHGIE 460
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y +L+G L N ++ A E ++ P+V TYT +I CK G IE A K+F
Sbjct: 320 VYTYTALIGGLCDANKVEDALEILKRMSSTGR-EPNVVTYTRVIGALCKGGQIERATKLF 378
Query: 218 -DVM-----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
D M KP+ AY+T+I C++ + EA + M+ Y AM GL
Sbjct: 379 NDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGL 438
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 179/346 (51%), Gaps = 8/346 (2%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
I+ L+ + G + A+ F + I+ + + N L+ + + A E FH++
Sbjct: 41 INLLLASLCQAGTMDQAMAIF---RGIQCSPSVITLNILINGFCELQLLDKALELFHEME 97
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-VKPNLLAYNTMINGFCKKGELEE 244
K + P+ +TYT +I+ YCKM ++ A+++ + + +++A ++ GFCK ++E
Sbjct: 98 KNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDE 157
Query: 245 AKKCMNEMMN-RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + + +M+ + +P+ + +N +I+G C GRV EA ++ + G N T+ +++
Sbjct: 158 AYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLI 217
Query: 304 KGLCVVGKFDQAVGYLR--NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
G C G +A+ + + + + P+V ++ +I+G CK + + A L+K+M+AR
Sbjct: 218 DGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD 277
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+ F++ + L + G + ++M + C P+ V+Y T++ C A G +QD
Sbjct: 278 LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKA-GSLQDA 336
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ ++ M+ G D T Y+ LL+G E G V + +++ ++
Sbjct: 337 QQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRER 382
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 139/279 (49%), Gaps = 10/279 (3%)
Query: 146 FHQAKQI-ENGACLYS----YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
QA+Q+ E +C S S+ + + A + +V++ PD+ + +
Sbjct: 122 LDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVI 181
Query: 201 IRGYCKMGMIENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG- 256
I G+CK G + A ++ + M PN + Y T+I+GFCK G L EA + + +R
Sbjct: 182 IHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDH 241
Query: 257 -CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
PN +T+NA+I GLC R++ A L+ +M+ + + T+ +++ GLC G+ +
Sbjct: 242 HAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEV 301
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
++ NP V +Y +++ CK G +A +++ M A+G+ P V ++ +
Sbjct: 302 SRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEG 361
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
L ENG++ A +++ + C P V Y+ ++ G C A
Sbjct: 362 LFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKA 400
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 161/310 (51%), Gaps = 8/310 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++++ L+ L + + A E ++Q+++ + VP ++ ++ C+ G ++ A +F
Sbjct: 4 FTFSVLIAGLCKAGRLGEAVECYNQMLERHCVP-NLRDINLLLASLCQAGTMDQAMAIFR 62
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEM-MNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ N +INGFC+ L++A + +EM N P TY A+I C R+
Sbjct: 63 GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME-ANMNPDVKSYEV 336
D+A+ L+ + + +V S+ +G C + D+A L +++E + PD+ ++ V
Sbjct: 123 DQARQLLEES--SCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+GFCK G+ EA +L+ + + G P ++ + ++G L A+ L K + D
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 397 --CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN V++N +I GLC A R++ +LV +M D Y+ L+ G C++G
Sbjct: 241 HHAEPNVVTFNALISGLCKAD-RLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299
Query: 455 NVMQIAHEMV 464
V ++ EM+
Sbjct: 300 EVSRVFEEML 309
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 127/265 (47%), Gaps = 7/265 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N ++ + ++ A E +V VP V TYTT+I G+CK G + A ++F
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAV-TYTTLIDGFCKSGNLSEALQLF 233
Query: 218 DVMT-----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
V++ +PN++ +N +I+G CK LE A + + +M R R + TY ++ GLC
Sbjct: 234 KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLC 293
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
GR E + +M G +V T+ +++ C G A +R+++ + PDV
Sbjct: 294 KQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVT 353
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y V++ G + GK A +++ P ++A+ R + +D A+ +M
Sbjct: 354 TYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM 413
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGR 417
P+ + ++ LC +GR
Sbjct: 414 LDRRLAPDPATCKLLVEMLC-KRGR 437
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 125/239 (52%), Gaps = 10/239 (4%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN ++ +I G CK G L EA +C N+M+ R C PN N ++ LC G +D+A
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQA--- 57
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN--MNPDVKSYEVVINGF 341
MA R +V T ++ G C + D+A+ L + ME N + P+ +Y +I +
Sbjct: 58 MAIFRGIQCSPSVITLNILINGFCELQLLDKAL-ELFHEMEKNFALVPEATTYTAIIKCY 116
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI-LLLKQMPQMDCLPN 400
CK+ + D+A LL+E + V + +V R + +D A LLL + + P+
Sbjct: 117 CKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
V++N II G C A GR+++ ++++ ++ G + Y+ L+ G+C+ GN+ +Q+
Sbjct: 175 IVAWNVIIHGFCKA-GRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQL 232
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 4/228 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIV-KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+Y +L+ + ++ A + F + +++ P+V T+ +I G CK +E+A ++
Sbjct: 212 TYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVK 271
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M ++ + Y T+++G CK+G E + EM+ GC P+ +TY +++ C G
Sbjct: 272 QMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAG 331
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ +A+ ++ M G +V+T+ +L+GL GK A + ++ P Y
Sbjct: 332 SLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYS 391
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
++ G CK DEA+ EM R L P + + +L + G D
Sbjct: 392 ALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 181/382 (47%), Gaps = 42/382 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + L+K D + A+ Q + G C + SY +++ + + A
Sbjct: 163 FSYNILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGT 221
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+H+++ ++P +V TY+++I CK ++ A +V M V PN YN++++G+C
Sbjct: 222 YHEMLDRGILP-NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G+ +EA + +M + G P+ +TYN+++ LC NGR EA+ + M G K ++
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++L+G G + G L ++ ++P+ + ++I + K GK D+A+ + +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM---- 413
R +GL P ++ V IL ++G ++ A+ +QM P + YN++I LC+
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 414 ------------------------------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+GR+ + E L D M+R G D YS L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520
Query: 444 LKGYCEEGNVENVMQIAHEMVT 465
+ GYC G ++ ++ MV+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVS 542
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 156/307 (50%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS++ K A F ++ + V PDV TY +++ CK G A+K+FD
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT +KP + Y T++ G+ KG L E ++ M+ G PN ++ +I G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A ++ +KMR G + T+ +++ LC G+ + A+ Y +++ ++P Y
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ C K D+A L+ EM RG+ FN++ + G + + L M ++
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ ++Y+T+I G C+A G+M + L+ M+ G D Y+ L+ GYC+ +E+
Sbjct: 510 VKPDIITYSTLIDGYCLA-GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 457 MQIAHEM 463
+ + EM
Sbjct: 569 LVLFREM 575
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 148/281 (52%), Gaps = 6/281 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM-----TVKPNLLAYNTMINGFCKKGELEEAK 246
P+V +Y +++G C + A ++ +M P++++Y T+INGF K+G+L++A
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+EM++RG PN +TY+++I LC +D+A ++ M NG N T+ S++ G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+ +A+G+L+ + + PDV +Y +++ CK G+ EA + M RGLKP +
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++ + + G L LL M + PN ++ +IC +G++ +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA-KQGKVDQAMLVFS 398
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+M + G N D Y ++ C+ G VE+ M+ +M+ ++
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 182/372 (48%), Gaps = 8/372 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P Y Y ++ H L+ + +++N + + S LI AY +G V A
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPNHYVFSILICAYAKQGKVDQA 393
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + +Q +Y +++G+L + ++ A +F Q++ E + P ++ Y ++I
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI-VYNSLIH 452
Query: 203 GYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
C + AK++ M + + + +N++I+ CK+G + E++K + M+ G +P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TY+ +I G C+ G++DEA L+A M G K + T+ +++ G C + + + A+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
R + + ++PD+ +Y +++ G + ++ A L + G + + ++N + L +N
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
D A+ + + + D ++N +I G + GR + +DL + +G D
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMI-GALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 440 YSCLLKGYCEEG 451
YS + + E+G
Sbjct: 692 YSLMAENLIEQG 703
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 167/369 (45%), Gaps = 40/369 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++ Y G K AI + + + +YNSL+ L + A + F + K
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334
Query: 189 VVPPDVSTYTTMIRGYC-----------------------------------KMGMIENA 213
+ P+++TY T+++GY K G ++ A
Sbjct: 335 L-KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393
Query: 214 KKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
VF M + P+ + Y T+I CK G +E+A + +M++ P + YN++I+
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LCI + D+AK L+ +M G + S++ C G+ ++ ++ + PD
Sbjct: 454 LCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 513
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ +Y +I+G+C GK DEA LL M + G+KP ++N + + ++ A++L +
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M P+ ++YN I+ GL + R ++L + SG L+ + Y+ +L G C+
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTR-RTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 451 GNVENVMQI 459
+ +++
Sbjct: 633 NLTDEALRM 641
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 141/264 (53%), Gaps = 6/264 (2%)
Query: 150 KQIENGACLYS--YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ ++ G CL + +NS++ + + +E+ F +V+ V PD+ TY+T+I GYC
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV-KPDIITYSTLIDGYCLA 527
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G ++ A K+ M +KP+ + YNT+ING+CK +E+A EM + G P+ +TY
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N ++ GL R AK L + +G + +ST+ +L GLC D+A+ +N+
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 647
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
++ + +++ ++I K+G++DEA L + A GL P V +++ + L+E G L+
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707
Query: 385 AILLLKQMPQMDCLPNFVSYNTII 408
L M + C N N+I+
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIV 731
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 162/357 (45%), Gaps = 55/357 (15%)
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRGYCKMGMIEN 212
GA +Y N L + R +S A ++++ + V P++ TY +I C G ++
Sbjct: 51 GASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDL 109
Query: 213 A--------KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK-CMNEMMNRGCRPNELT 263
KK F V + +A+ ++ G C +A + M GC PN +
Sbjct: 110 GFAALGNVIKKGFRV-----DAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNG-----------------FKD------------ 294
YN ++ GLC R EA L+ M +G FK+
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 295 --------NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
NV T+ S++ LC D+A+ L ++++ + P+ ++Y +++G+C G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
EAI LK+M + G++P V ++N++ L +NG A + M + P +Y T
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ G KG + ++ L+D M+R+G + + ++S L+ Y ++G V+ M + +M
Sbjct: 345 LLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P++ +Y ++I C G+ D + L + +G + +F + + L + A+
Sbjct: 87 VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146
Query: 387 -LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL--DFTMYSCL 443
++L++M Q+ C+PN SYN ++ GLC + R Q+ +L+ M G + D Y+ +
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLC-DENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+ G+ +EG+++ HEM+ +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDR 228
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 4/214 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y ++ A+ F + + + +YN +L L + A+E + I E+
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT-ES 613
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
++STY ++ G CK + + A ++F + ++ +N MI K G +EA
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + G P+ TY+ M L G ++E L M NG N S+++
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
L G +A YL + E + + + + + ++
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 165/312 (52%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN+++ R N I A + ++ K PD+ TY +I C GM+++A +
Sbjct: 126 LIAYNAIITGFCRANRIDSAYQVLDRM-KNKGFSPDIVTYNILIGSLCSRGMLDSALEFK 184
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ + KP ++ Y +I +G ++EA K ++EM+ +P+ TYN++I G+C
Sbjct: 185 NQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCRE 244
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G VD A +++ + G+ +V T+ +L+GL GK++ + +++ +V +Y
Sbjct: 245 GYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTY 304
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+I+ C+ GK +E + LLK+M+ +GLKP + ++ + L + G +D AI +L M
Sbjct: 305 SVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMIS 364
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C+P+ V+YNTI+ LC K R + + +++ G + + + Y+ + G+
Sbjct: 365 DGCVPDIVNYNTILACLCKQK-RADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423
Query: 455 NVMQIAHEMVTK 466
+ + EM+ K
Sbjct: 424 RALGMILEMLDK 435
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 178/345 (51%), Gaps = 5/345 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + RG + +A+ + +Q + + +Y L+ + I A + ++++ N
Sbjct: 167 LIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEIN 226
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+ PD+ TY ++IRG C+ G ++ A ++ ++ K P+++ YN ++ G +G+ E
Sbjct: 227 L-QPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAG 285
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M++M+ RGC N +TY+ +I +C +G+V+E L+ M+ G K + + ++
Sbjct: 286 YELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAA 345
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ D A+ L ++ PD+ +Y ++ CK ++DEA+S+ +++ G P
Sbjct: 346 LCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPN 405
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
S+N++F L G RA+ ++ +M P+ ++YN++I LC + +E LV
Sbjct: 406 ASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLV 465
Query: 426 DRMIRSGH-NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
D + S Y+ +L G C+ V + +++ MV K R
Sbjct: 466 DMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCR 510
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 142/276 (51%), Gaps = 3/276 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT--VKPNLLAYNTMINGFCKKGELEEAKKCM 249
PDV T +I G I+ A +V ++ P+L+AYN +I GFC+ ++ A + +
Sbjct: 90 PDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLIAYNAIITGFCRANRIDSAYQVL 149
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+ M N+G P+ +TYN +I LC G +D A ++ K V T+ +++ +
Sbjct: 150 DRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQ 209
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G D+A+ L ++E N+ PD+ +Y +I G C+ G D A ++ + ++G P V ++
Sbjct: 210 GGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITY 269
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + R L+ G+ + L+ M C N V+Y+ +I +C G++++ L+ M
Sbjct: 270 NILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVC-RDGKVEEGVGLLKDMK 328
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ G D Y L+ C+EG V+ +++ M++
Sbjct: 329 KKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMIS 364
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 161/368 (43%), Gaps = 16/368 (4%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNS---NKLSDFFI- 126
AL F N N P T YT + + L I A LL N D F
Sbjct: 180 ALEFKNQLLKENCKP-----TVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTY 234
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I+ G V A + +YN LL L+ + E +V
Sbjct: 235 NSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVA 294
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+V TY+ +I C+ G +E + M +KP+ Y+ +I CK+G ++
Sbjct: 295 RGC-EANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVD 353
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + ++ M++ GC P+ + YN ++ LC R DEA + K+ G N S++ SM
Sbjct: 354 LAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMF 413
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL--KEMRARG 361
L G +A+G + +++ ++PD +Y +I+ C+ G DEAI LL EM +
Sbjct: 414 SALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSE 473
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
KP+V S+N V L + + AI +L M C PN +Y +I G+ G + D
Sbjct: 474 CKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFG-GCLNDA 532
Query: 422 EDLVDRMI 429
DL ++
Sbjct: 533 RDLATTLV 540
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 36/266 (13%)
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNE----------------------------------L 262
CK G E+ + ++N+G +P+ +
Sbjct: 68 CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLI 127
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
YNA+I G C R+D A ++ +M+ GF ++ T+ ++ LC G D A+ + +
Sbjct: 128 AYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQL 187
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
++ N P V +Y ++I G DEA+ LL EM L+P +F++N++ R + G +
Sbjct: 188 LKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYV 247
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
DRA ++ + P+ ++YN ++ GL + +G+ + +L+ M+ G + YS
Sbjct: 248 DRAFQIISSISSKGYAPDVITYNILLRGL-LNQGKWEAGYELMSDMVARGCEANVVTYSV 306
Query: 443 LLKGYCEEGNVENVMQIAHEMVTKKG 468
L+ C +G VE + + +M KKG
Sbjct: 307 LISSVCRDGKVEEGVGLLKDM-KKKG 331
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 5/219 (2%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+K+ + PD Y +I CK G ++ A +V DVM P+++ YNT++ CK+
Sbjct: 327 MKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKR 386
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+EA ++ GC PN +YN+M L G A ++ +M G + T+ S
Sbjct: 387 ADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNS 446
Query: 302 MLKGLCVVGKFDQAVGYLRNV-MEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ LC G D+A+ L ++ ME++ P V SY +V+ G CK+ + +AI +L M
Sbjct: 447 LISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVD 506
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
+G +P ++ + + G L+ A L + MD +
Sbjct: 507 KGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAI 545
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 111/261 (42%), Gaps = 48/261 (18%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + G V+ + K+ Y Y+ L+ L + + LA E ++
Sbjct: 305 SVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMIS 364
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT------------------------- 221
+ VP D+ Y T++ CK + A +F+ +
Sbjct: 365 DGCVP-DIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423
Query: 222 -------------VKPNLLAYNTMINGFCKKGELEEAKKCM--NEMMNRGCRPNELTYNA 266
V P+ + YN++I+ C+ G ++EA + + EM + C+P+ ++YN
Sbjct: 424 RALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
++ GLC RV +A ++A M G + N +T+ +++G+ G + A R++
Sbjct: 484 VLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDA----RDLATTL 539
Query: 327 MNPDV---KSYEVVINGFCKI 344
+N D S+E + FCK+
Sbjct: 540 VNMDAISEHSFERLYKTFCKL 560
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 11/180 (6%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ F + ++ SYNS+ L A +++ + V PD TY ++I
Sbjct: 390 ALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGV-DPDGITYNSLI 448
Query: 202 RGYCKMGMIENAKKVFDVMTV-----KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
C+ GM++ A ++ M + KP++++YN ++ G CK + +A + + M+++G
Sbjct: 449 SCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKG 508
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH--KSMLKGLCVVGKFDQ 314
CRPNE TY +I G+ G +++A+ L A +N D +S H + + K C + + Q
Sbjct: 509 CRPNETTYTFLIEGIGFGGCLNDARDL-ATTLVN--MDAISEHSFERLYKTFCKLDVYRQ 565
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 179/346 (51%), Gaps = 8/346 (2%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
I+ L+ + G + A+ F + I+ + + N L+ + + A E FH++
Sbjct: 41 INLLLASLCQAGKMDQAMAIF---RGIQCSPSVITLNILINGFCELQLLDKALELFHEME 97
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-VKPNLLAYNTMINGFCKKGELEE 244
K + P+ +TYT +I+ YCKM ++ A+++ + + +++A ++ GFCK ++E
Sbjct: 98 KNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDE 157
Query: 245 AKKCMNEMMN-RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + + +M+ + +P+ + +N +I+G C GRV EA ++ + G N T+ +++
Sbjct: 158 AYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLI 217
Query: 304 KGLCVVGKFDQAVGYLR--NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
G C G +A+ + + + + P+V ++ +I+G CK + + A L+K+M+AR
Sbjct: 218 DGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD 277
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+ F++ + L + G + ++M + C P+ V+Y T++ C A G +QD
Sbjct: 278 LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKA-GSLQDA 336
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ ++ M+ G D T Y+ LL+G E G V + +++ ++
Sbjct: 337 QQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRER 382
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 139/279 (49%), Gaps = 10/279 (3%)
Query: 146 FHQAKQI-ENGACLYS----YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
QA+Q+ E +C S S+ + + A + +V++ PD+ + +
Sbjct: 122 LDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVI 181
Query: 201 IRGYCKMGMIENAKKVFDV---MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG- 256
I G+CK G + A ++ + M PN + Y T+I+GFCK G L EA + + +R
Sbjct: 182 IHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDH 241
Query: 257 -CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
PN +T+NA+I GLC R++ A L+ +M+ + + T+ +++ GLC G+ +
Sbjct: 242 HAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEV 301
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
++ NP V +Y +++ CK G +A +++ M A+G+ P V ++ +
Sbjct: 302 SRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEG 361
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
L ENG++ A +++ + C P V Y+ ++ G C A
Sbjct: 362 LFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKA 400
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 161/310 (51%), Gaps = 8/310 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++++ L+ L + + A E ++Q+++ + VP ++ ++ C+ G ++ A +F
Sbjct: 4 FTFSVLIAGLCKAGRLGEAVECYNQMLERHCVP-NLRDINLLLASLCQAGKMDQAMAIFR 62
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEM-MNRGCRPNELTYNAMIYGLCINGRV 277
+ P+++ N +INGFC+ L++A + +EM N P TY A+I C R+
Sbjct: 63 GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME-ANMNPDVKSYEV 336
D+A+ L+ + + +V S+ +G C + D+A L +++E + PD+ ++ V
Sbjct: 123 DQARQLLEES--SCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+GFCK G+ EA +L+ + + G P ++ + ++G L A+ L K + D
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 397 --CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN V++N +I GLC A R++ +LV +M D Y+ L+ G C++G
Sbjct: 241 HHAEPNVVTFNALISGLCKAD-RLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299
Query: 455 NVMQIAHEMV 464
V ++ EM+
Sbjct: 300 EVSRVFEEML 309
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 148/331 (44%), Gaps = 10/331 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSD--FFISKLIKAYGDRGNVKAAI-FWFHQAKQ 151
YTAI + A LL+ S+ S I+ + + + V A ++
Sbjct: 109 YTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEK 168
Query: 152 IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIE 211
+ ++N ++ + ++ A E +V VP V TYTT+I G+CK G +
Sbjct: 169 KSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAV-TYTTLIDGFCKSGNLS 227
Query: 212 NAKKVFDVMT-----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
A ++F V++ +PN++ +N +I+G CK LE A + + +M R R + TY
Sbjct: 228 EALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTT 287
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
++ GLC GR E + +M G +V T+ +++ C G A +R+++
Sbjct: 288 LMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKG 347
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PDV +Y V++ G + GK A +++ P ++A+ R + +D A+
Sbjct: 348 IPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAV 407
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+M P+ + ++ LC +GR
Sbjct: 408 KYYVEMLDRRLAPDPATCKLLVEMLC-KRGR 437
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 126/239 (52%), Gaps = 10/239 (4%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN ++ +I G CK G L EA +C N+M+ R C PN N ++ LC G++D+A
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQA--- 57
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN--MNPDVKSYEVVINGF 341
MA R +V T ++ G C + D+A+ L + ME N + P+ +Y +I +
Sbjct: 58 MAIFRGIQCSPSVITLNILINGFCELQLLDKAL-ELFHEMEKNFALVPEATTYTAIIKCY 116
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI-LLLKQMPQMDCLPN 400
CK+ + D+A LL+E + V + +V R + +D A LLL + + P+
Sbjct: 117 CKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
V++N II G C A GR+++ ++++ ++ G + Y+ L+ G+C+ GN+ +Q+
Sbjct: 175 IVAWNVIIHGFCKA-GRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQL 232
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 4/228 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIV-KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+Y +L+ + ++ A + F + +++ P+V T+ +I G CK +E+A ++
Sbjct: 212 TYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVK 271
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M ++ + Y T+++G CK+G E + EM+ GC P+ +TY +++ C G
Sbjct: 272 QMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAG 331
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ +A+ ++ M G +V+T+ +L+GL GK A + ++ P Y
Sbjct: 332 SLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYS 391
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
++ G CK DEA+ EM R L P + + +L + G D
Sbjct: 392 ALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 212/423 (50%), Gaps = 16/423 (3%)
Query: 54 GSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAAS 113
S+I + + +P L FF+WAS + N Y + C +++ +L L S S
Sbjct: 30 ASDIACHMFDQIHDPEMGLEFFHWASKQS-NCGNYLNEFSC-SSLLRLLARRRLFSEVES 87
Query: 114 LLK--NSNKL--SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC-LYSYNSLLGVL 168
LLK S L + S +I + D G V A+ ++ +I + ++S NSLL VL
Sbjct: 88 LLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVL 147
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTT--MIRGYCKMGMIENAKKVFDVMTVK--- 223
V+ +++A + + ++V N +V YT M++G CK G +E+ K+ + +
Sbjct: 148 VKHGKVEIACKVYDEMVDRN---GEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCM 204
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN++ YNT+I+G+CKKG+ E A E+ +G P TY A+I G C G+ + L
Sbjct: 205 PNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKL 264
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ +M G ++ + +++ G +A + ++++ +PD+ +Y ++I G C
Sbjct: 265 LVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCS 324
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+ +A LL++ RGL P S+ + + GE RA+ LL +M + P+ V+
Sbjct: 325 CGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVT 384
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y +I GL +A G + + ++M+ G D +Y+ L+ G C++G + + EM
Sbjct: 385 YAALIHGLIVA-GEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEM 443
Query: 464 VTK 466
+ +
Sbjct: 444 LDQ 446
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 185/425 (43%), Gaps = 51/425 (12%)
Query: 87 KYHHTTP---CYTAITDVLLSHSLISIAA----SLLKNSNKLSDFFISKLIKAYGDRGNV 139
K HH P ++ +VL+ H + IA ++ + ++ ++ + ++K G V
Sbjct: 129 KIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKV 188
Query: 140 KAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTY 197
+ W K+ G + YN+L+ + + A F ++ + +P V TY
Sbjct: 189 EDG--WKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPT-VKTY 245
Query: 198 TTMIRGYCKMGMIENAKKVFDVMTVK---------------------------------- 223
+I G+CK G E K+ M+ +
Sbjct: 246 GAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIK 305
Query: 224 ----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
P++ YN +I G C GE+ +A++ + + + RG PN+++Y +I+ C G
Sbjct: 306 SGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLR 365
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L+ KM G K ++ T+ +++ GL V G+ D A+ ++E + PD Y V+++
Sbjct: 366 ALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMS 425
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G CK G+ A LL EM + + P F + + +G+ + A L + + P
Sbjct: 426 GLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDP 485
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
V YN +I G C G M+D RMI+ H+ D YS ++ GY + ++ +++
Sbjct: 486 GVVGYNAMIKGYCKF-GMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRM 544
Query: 460 AHEMV 464
MV
Sbjct: 545 FGLMV 549
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 148/313 (47%), Gaps = 5/313 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YN L+ + AE+ Q +K ++P VS YT +I YCK G A +
Sbjct: 312 MATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVS-YTPLIHNYCKQGEYLRALDLL 370
Query: 218 DVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M+ KP+L+ Y +I+G GE++ A N+M+ +G P+ YN ++ GLC
Sbjct: 371 IKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKK 430
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
GR+ AK+L+A+M + +++ G G F++A +E ++P V Y
Sbjct: 431 GRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGY 490
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G+CK G +A+ K M P F+++ + ++ +L A+ + M +
Sbjct: 491 NAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVK 550
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C PN V+Y +I G C++ G + E +M+ + Y+ L+ +C+ N+
Sbjct: 551 GACKPNVVTYTLLINGFCLS-GDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLT 609
Query: 455 NVMQIAHEMVTKK 467
+M+ +K
Sbjct: 610 KACSFFEQMLMEK 622
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 166/354 (46%), Gaps = 15/354 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y +G A+ + + + L +Y +L+ L+ + +A +++V+
Sbjct: 351 TPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVE 410
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ V+P D + Y ++ G CK G + AK + M V P+ T+++GF + G+ E
Sbjct: 411 KGVLP-DANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFE 469
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EAKK + +G P + YNAMI G C G + +A + +M + T+ +++
Sbjct: 470 EAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTII 529
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G + A+ +++ P+V +Y ++INGFC G + A K+M + LK
Sbjct: 530 DGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLK 589
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC------MAKGR 417
P V ++ + + L +A +QM CLPN V+YN ++ GL ++ R
Sbjct: 590 PNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQR 649
Query: 418 MQDVEDLV-----DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E+ + MI G + Y+ +L C+ V++ + + +M++K
Sbjct: 650 SEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSK 703
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 144/319 (45%), Gaps = 17/319 (5%)
Query: 163 SLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV 222
+L+ +R + A++ F ++ E + P V Y MI+GYCK GM+++A F M
Sbjct: 457 TLVDGFIRHGDFEEAKKLF-ELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQ 515
Query: 223 ---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
P+ Y+T+I+G+ K +L A + M+ C+PN +TY +I G C++G ++
Sbjct: 516 GLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINR 575
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A+ +M K NV T+ ++ C +A + ++ P+ +Y ++N
Sbjct: 576 AEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMN 635
Query: 340 G------FCKIGKSDEAI--SLLKE----MRARGLKPTVFSFNAVFRILVENGELDRAIL 387
G F + E SL+ E M + G S+N++ L ++ + A+
Sbjct: 636 GLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALH 695
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L +M LP+ VS ++ GLC+ +GR QD +++ + YS L +
Sbjct: 696 LRDKMMSKGFLPDPVSLVALLHGLCL-EGRSQDWNNVISCKLNERELQVAVKYSEKLDAF 754
Query: 448 CEEGNVENVMQIAHEMVTK 466
+G I H + +
Sbjct: 755 LSQGQTSEASLILHSLADQ 773
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 128/296 (43%), Gaps = 41/296 (13%)
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF----DVMTVKPNLLAYNTMIN 234
E +I+K + P ++ +I + G+++ A + + + P++ + N+++N
Sbjct: 86 ESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLN 145
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
K G++E A K +EM++R NG VD + +
Sbjct: 146 VLVKHGKVEIACKVYDEMVDR------------------NGEVDNYTVCI---------- 177
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
M+KGLC GK + + P++ Y +I+G+CK G ++ A L
Sbjct: 178 -------MVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLF 230
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
KE++ +G PTV ++ A+ + G+ + LL +M + + YN II
Sbjct: 231 KELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKH 290
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
R++ D V MI+SG + D Y+ L+ G C G V Q+ E K+G L
Sbjct: 291 GCRIE-AADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLL-EQAIKRGLL 344
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 115/283 (40%), Gaps = 59/283 (20%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IK Y G +K A+ F + Q + ++Y++++ +++N + A F +VK
Sbjct: 493 MIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVK-G 551
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
P+V TYT +I G+C G I A+K F M +KPN++ Y +I FCK L +A
Sbjct: 552 ACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKA 611
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGL---------------------------------- 271
+M+ C PN++TYN ++ GL
Sbjct: 612 CSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWD 671
Query: 272 -------------CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
C + V A L KM GF + + ++L GLC+ G+
Sbjct: 672 RRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQD---- 727
Query: 319 LRNVMEANMNPD----VKSYEVVINGFCKIGKSDEAISLLKEM 357
NV+ +N Y ++ F G++ EA +L +
Sbjct: 728 WNNVISCKLNERELQVAVKYSEKLDAFLSQGQTSEASLILHSL 770
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 161/291 (55%), Gaps = 5/291 (1%)
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-DVMTV--KPNLLAYNTMINGFC 237
F + ++ N + ++ T MI +C+ A V VM + +P+ +NT+ING C
Sbjct: 87 FCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLC 146
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+ ++ EA + M+ GC+PN +TYN+++ G+C +G A L+ KM K +V
Sbjct: 147 LESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVF 206
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ LC G D A+ + + + + +Y ++ G CK GK ++ + LLK+M
Sbjct: 207 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDM 266
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+R + P V +FN + + V+ G+L A L K+M PN ++YN+++ G CM + R
Sbjct: 267 TSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCM-QNR 325
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ + +++D M+R+ + D ++ L+KGYC+ V+ M++ + ++K+G
Sbjct: 326 LSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRK-ISKRG 375
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 194/383 (50%), Gaps = 9/383 (2%)
Query: 88 YHHTTPCYTAITDVLLSHSLIS----IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAI 143
Y T + + + L S +S + A +++N + + + ++ G+ A+
Sbjct: 131 YEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLAL 190
Query: 144 FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
+ + A +++Y++++ L R I A F ++ + + + TY +++ G
Sbjct: 191 DLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI-KSSLVTYNSLVGG 249
Query: 204 YCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
CK G + ++ MT + PN++ +N +I+ F K+G+L+EA + EM+ +G PN
Sbjct: 250 LCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPN 309
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+TYN+++ G C+ R+ EA ++ M N ++ T S++KG C V + D+ + R
Sbjct: 310 TITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFR 369
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ + + + +Y +++ GFC+ GK + A L +EM + G+ P V ++ + L +NG
Sbjct: 370 KISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNG 429
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+L++A+ + + + + + V Y II G+C G+++D +L + G + Y
Sbjct: 430 KLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKG-GKVEDAWNLFCSLPCKGVKPNVMTY 488
Query: 441 SCLLKGYCEEGNVENVMQIAHEM 463
+ ++ G C++G++ + +M
Sbjct: 489 TVMISGLCKKGSLSEANILLRKM 511
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 174/351 (49%), Gaps = 13/351 (3%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
Y+ I D L I A SL K + S L+ G + A W + +++
Sbjct: 208 YSTIIDSLCRDGCIDAAISLFKEME--TKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKD 265
Query: 155 GAC------LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
+ ++N L+ V V+ ++ A E + +++ + + P + TY +++ GYC
Sbjct: 266 MTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTI-TYNSLMDGYCMQN 324
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+ A + D+M P+++ + ++I G+CK ++E K ++ RG N +TY+
Sbjct: 325 RLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYS 384
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
++ G C +G+++ A+ L +M G +V T+ +L GLC GK ++A+ ++ ++
Sbjct: 385 ILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 444
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
MN D+ Y ++I G CK GK ++A +L + +G+KP V ++ + L + G L A
Sbjct: 445 KMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 504
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+LL++M + PN +YNT+I + G + L++ M G + D
Sbjct: 505 NILLRKMEEDGNEPNDCTYNTLIRAH-LRDGDLTASAKLIEEMKSCGFSAD 554
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 159/347 (45%), Gaps = 38/347 (10%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+ N ++ R A +++K PD +T+ T+I G C + A +
Sbjct: 100 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTLINGLCLESKVSEAVVLV 158
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M +PN++ YN+++NG CK G+ A + +M R + + TY+ +I LC +
Sbjct: 159 ARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRD 218
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D A L +M G K ++ T+ S++ GLC GK++ V L+++ + P+V ++
Sbjct: 219 GCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITF 278
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+I+ F K GK EA L KEM +G+ P ++N++ L A +L M +
Sbjct: 279 NVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVR 338
Query: 395 MDCLPNFVSYNTIICGLCMAK----------------------------------GRMQD 420
+C P+ V++ ++I G C K G+++
Sbjct: 339 NNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEI 398
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
E+L M+ G D Y LL G C+ G +E ++I ++ K
Sbjct: 399 AEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 445
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 111/222 (50%), Gaps = 4/222 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++ SL+ +V + + F +I K +V V TY+ +++G+C+ G +E A+++F
Sbjct: 345 IVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTV-TYSILVQGFCQSGKLEIAEELF 403
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V P+++ Y +++G C G+LE+A + ++ + + Y +I G+C
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKG 463
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+V++A L + G K NV T+ M+ GLC G +A LR + E P+ +Y
Sbjct: 464 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTY 523
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
+I + G + L++EM++ G S V +L
Sbjct: 524 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 126/301 (41%), Gaps = 57/301 (18%)
Query: 222 VKPNLLAYNTMINGF-CKKGELEEAKKCMNEMMNRGC--------------------RPN 260
V+P+LL T+ F C + + + C E + G P+
Sbjct: 5 VQPHLLDTGTLRTDFLCTISGISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPS 64
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV------------------------ 296
+ ++ G+ + + KM LNG N+
Sbjct: 65 LVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLG 124
Query: 297 -----------STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+T +++ GLC+ K +AV + ++E P+V +Y ++NG CK G
Sbjct: 125 KVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSG 184
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ A+ LL++M R +K VF+++ + L +G +D AI L K+M + V+YN
Sbjct: 185 DTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYN 244
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+++ GLC A G+ D L+ M + ++ L+ + +EG ++ ++ EM+T
Sbjct: 245 SLVGGLCKA-GKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMIT 303
Query: 466 K 466
K
Sbjct: 304 K 304
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 159/295 (53%), Gaps = 5/295 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y+ L+ L ++ A ++ +E P++ TY+T++ +C+ GM ++A+ +
Sbjct: 348 VHTYSILMHGLCKLGRFGSAVRMLDEM-EEKGCAPNIVTYSTLLHSFCRNGMWDDARAML 406
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M K N YN +I CK G+L++A + + EM ++GC+P+ TYN MIY LC N
Sbjct: 407 DQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNN 466
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
++EA+ + + G N T+ +++ L G++ + + ++ DV SY
Sbjct: 467 DLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISY 526
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I CK G D +++LL+EM +G+KP FS+N + L + G++ A+ L K+M
Sbjct: 527 NGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLN 586
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
P+ V+YNT+I GLC G +L++++ + D Y+ L+ +C+
Sbjct: 587 QGLTPDIVTYNTLINGLCKV-GWTHAALNLLEKLPNENVHPDIVTYNILISWHCK 640
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 151/330 (45%), Gaps = 44/330 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y LL L R A ++ + NVV T+IRG G + A +++++
Sbjct: 284 TYGFLLQGLCRTRQADEACAMLGRLPEVNVV-----MLNTVIRGCLTEGKLARATELYEM 338
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P++ Y+ +++G CK G A + ++EM +GC PN +TY+ +++ C NG
Sbjct: 339 MGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGM 398
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D+A+ ++ +M GF N + ++ LC GK DQA ++ + PD+ +Y
Sbjct: 399 WDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNT 458
Query: 337 VINGFC-----------------------------------KIGKSDEAISLLKEMRARG 361
+I C + G+ E + L EM G
Sbjct: 459 MIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG 518
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ V S+N + + L + G +DR++ LL++M PN SYN +I LC A G+++D
Sbjct: 519 CQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKA-GKVRDA 577
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+L M+ G D Y+ L+ G C+ G
Sbjct: 578 LELSKEMLNQGLTPDIVTYNTLINGLCKVG 607
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 127/252 (50%), Gaps = 4/252 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
YN ++ L + + A ++ K PD+ TY TMI C ++E A+ +F
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEM-KSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRN 478
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ V N + YNT+I+ + G +E + +EM+ GC+ + ++YN +I LC G
Sbjct: 479 LIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGN 538
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD + L+ +M G K N ++ ++ LC GK A+ + ++ + PD+ +Y
Sbjct: 539 VDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNT 598
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING CK+G + A++LL+++ + P + ++N + + LD A +LL +
Sbjct: 599 LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGG 658
Query: 397 CLPNFVSYNTII 408
+PN ++ ++
Sbjct: 659 IVPNERTWGMMV 670
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 140/324 (43%), Gaps = 35/324 (10%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMI 233
A Q+ + V P +Y ++ + +A ++ M V P +
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
C+ G +A + M GC P+ + Y +I+ L G V EA ML+ +M L G
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+V+T ++ GLC +G+ +A + +M P V +Y ++ G C+ ++DEA ++
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304
Query: 354 LKE-------------------------------MRARGLKPTVFSFNAVFRILVENGEL 382
L M ++G P V +++ + L + G
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
A+ +L +M + C PN V+Y+T++ C G D ++D+M+ G +++ Y+
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFC-RNGMWDDARAMLDQMLAKGFSMNSQGYNG 423
Query: 443 LLKGYCEEGNVENVMQIAHEMVTK 466
++ C++G ++ ++ EM ++
Sbjct: 424 IIYALCKDGKLDQATRLVQEMKSQ 447
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 96/191 (50%), Gaps = 12/191 (6%)
Query: 160 SYNSLLGVLVR----VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
+YN+L+ L+R ++LA E + +V+ +Y +I+ CK G ++ +
Sbjct: 490 TYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVI-----SYNGLIKALCKEGNVDRSMA 544
Query: 216 VFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ + M +KPN +YN +IN CK G++ +A + EM+N+G P+ +TYN +I GLC
Sbjct: 545 LLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC 604
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G A L+ K+ ++ T+ ++ C V D A L + + P+ +
Sbjct: 605 KVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNER 664
Query: 333 SYEVVINGFCK 343
++ +++ F +
Sbjct: 665 TWGMMVQNFVR 675
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 167/315 (53%), Gaps = 12/315 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +L+ L N +K A F ++V+EN+ PD Y T++ G CK G + +K FD+
Sbjct: 144 TFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKG---HTQKAFDL 200
Query: 220 MTV------KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
+ + KP+ YN +I+ FCK G L+ A +NEM + P+ +TY ++I GL
Sbjct: 201 LRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGK 260
Query: 274 NGRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+ ++ + L +M LN + D V T S++ GLC GK + A + ++E + P+
Sbjct: 261 LSQWEKVRTLFLEMIHLNIYPD-VCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEI 319
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y VV++G+C G+ A + M +G++P + S+ A+ VE ++D+A+ L +++
Sbjct: 320 TYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREI 379
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
Q P+ V+ + ++ GL GR + + D M +GH + + LL GY + G
Sbjct: 380 SQNGLKPSIVTCSVLLRGL-FEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGL 438
Query: 453 VENVMQIAHEMVTKK 467
VE M H++ ++
Sbjct: 439 VEEAMSHFHKLERRR 453
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 162/306 (52%), Gaps = 5/306 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ + + A +++ ++N+ PPD+ TYT++I G K+ E + +F M
Sbjct: 216 YNIVIDAFCKDGMLDGATSLLNEMKQKNI-PPDIITYTSLIDGLGKLSQWEKVRTLFLEM 274
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P++ +N++I+G CK+G++E+A++ M M+ +G PNE+TYN ++ G C+ G++
Sbjct: 275 IHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQM 334
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A+ + M G + ++ ++ +++ G K D+A+ R + + + P + + V+
Sbjct: 335 GRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVL 394
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+ G ++G+++ A EM+A G P +++ + +NG ++ A+ ++ +
Sbjct: 395 LRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRE 454
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
N Y +I GLC G++ +++ G + D Y+ ++ GYC+EG ++
Sbjct: 455 DTNIQIYTAVINGLC-KNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513
Query: 458 QIAHEM 463
+ +M
Sbjct: 514 DMLRKM 519
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 165/321 (51%), Gaps = 39/321 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I A+ G + A ++ KQ + +Y SL+ L +++ + F +++ N
Sbjct: 219 VIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLN 278
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P DV T+ ++I G CK G +E+A+++ M V+PN + YN +++G+C +G++ A
Sbjct: 279 IYP-DVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRA 337
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ + M+++G P+ ++Y A+I G ++D+A L ++ NG K ++ T +L+G
Sbjct: 338 RRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRG 397
Query: 306 LCVVGK-------FD--QAVGYLRNV---------------MEANM-----------NPD 330
L VG+ FD QA G++ N+ +E M + +
Sbjct: 398 LFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTN 457
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
++ Y VING CK GK D+A + +++ GL P V ++ A+ + G LD A +L+
Sbjct: 458 IQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLR 517
Query: 391 QMPQMDCLPNFVSYNTIICGL 411
+M CLP+ +YN I+ G
Sbjct: 518 KMEDNGCLPDNRTYNVIVRGF 538
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM-NPD 330
C+ R D ++A G N T ++++GL K AV + ++ N+ PD
Sbjct: 118 CLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPD 177
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
Y V++G CK G + +A LL+ M KP +N V ++G LD A LL
Sbjct: 178 EVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLN 237
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M Q + P+ ++Y ++I GL + + V L MI D ++ ++ G C+E
Sbjct: 238 EMKQKNIPPDIITYTSLIDGLGKL-SQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKE 296
Query: 451 GNVENVMQIAHEMVTK 466
G VE+ +I M+ K
Sbjct: 297 GKVEDAEEIMTYMIEK 312
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 2/191 (1%)
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D+A L +M + + +LK L + + V R + + + D +
Sbjct: 53 LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
V+N C + ++D S+L +G+ +F + R L ++ A+ L K++ + +
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172
Query: 397 -CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C P+ V Y T++ GLC KG Q DL+ M + D +Y+ ++ +C++G ++
Sbjct: 173 ICEPDEVMYGTVMDGLC-KKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDG 231
Query: 456 VMQIAHEMVTK 466
+ +EM K
Sbjct: 232 ATSLLNEMKQK 242
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 173/363 (47%), Gaps = 6/363 (1%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
++ A++ + L + + ++++ ++G K +F + + + +Y + + L
Sbjct: 94 ALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGL 153
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF----DVMTVKP 224
+ +K A ++V + P+V T+TT+I G CK+G E A ++F + KP
Sbjct: 154 CKRRYVKQAFHVLEEMVGRGL-KPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKP 212
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N+ Y MI G+C++G+L A+ + M+ +G +PN TY +I G C G D A LM
Sbjct: 213 NVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELM 272
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
KM+ GF N+ T+ +++ G C GK +A LR + D +Y ++I CK
Sbjct: 273 NKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQ 332
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G A+ L M G P + ++ ++ + +++ + + + LP +Y
Sbjct: 333 GHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTY 392
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
++I G C GR + +RM+++G D Y L+ G C+E +E + M+
Sbjct: 393 TSMIAGYCKV-GRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGML 451
Query: 465 TKK 467
K+
Sbjct: 452 DKR 454
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y ++G R + AE ++V++ + P+ +TYTT+I G+CK G + A ++
Sbjct: 214 VHTYTVMIGGYCREGKLARAEMLLVRMVEQGL-KPNTNTYTTLIGGHCKGGSFDRAFELM 272
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + PN+ YN +I+GFCKKG+++EA K + ++G + +++TY +I C
Sbjct: 273 NKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQ 332
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + A L +M NG ++ + S++ C + +++ + + + P ++Y
Sbjct: 333 GHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTY 392
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G+CK+G+S A+ + + M G ++ A+ L + L+ A L + M
Sbjct: 393 TSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLD 452
Query: 395 MDCLPNFVSYNTIICGLC 412
+P V+ T+ C
Sbjct: 453 KRLVPCEVTRVTLTFEYC 470
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 138/288 (47%), Gaps = 6/288 (2%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
++ + +P V T ++R + G A+KVFD MT V P + ++ C++G+
Sbjct: 29 MRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGK 88
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+EE + M G + T ++ LC GR + +M G NV + +
Sbjct: 89 VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTA 148
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL-LKEMRAR 360
+ GLC QA L ++ + P+V ++ +I+G CKIG ++ A L LK +++
Sbjct: 149 WIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSS 208
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
KP V ++ + G+L RA +LL +M + PN +Y T+I G C G
Sbjct: 209 SYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKG-GSFDR 267
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+L+++M + G + Y+ ++ G+C++G ++ ++ M T +G
Sbjct: 268 AFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR-MATSQG 314
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 139/286 (48%), Gaps = 9/286 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI + G+ A ++ KQ +Y+YN+++ + I+ A +
Sbjct: 253 TTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 312
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ + D TYT +I +CK G I A +FD M P++ AY ++I+ +C++ ++E
Sbjct: 313 QGL-KFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQME 371
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-FKDNVSTHKSM 302
E++K ++ + G P + TY +MI G C GR A + +M NG F D++ T+ ++
Sbjct: 372 ESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSI-TYGAL 430
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC + ++A +++ + P + + +C+ K+ A+S+L + R
Sbjct: 431 ISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKR-- 488
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
V + + V R L G++D A L LK++ D + +Y I
Sbjct: 489 -QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFI 533
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
M+ GR+ EA ++ +MR +G V T +L+ G F A +
Sbjct: 7 RGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTR 66
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
A ++P + + ++ C+ GK +E +LL M G + V R L E G
Sbjct: 67 AGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKD 126
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
++M + PN V+Y I GLC + ++ +++ M+ G + ++ L+
Sbjct: 127 VSEFFRRMLETGTPPNVVNYTAWIDGLCKRR-YVKQAFHVLEEMVGRGLKPNVYTHTTLI 185
Query: 445 KGYCEEGNVENVMQI 459
G C+ G E ++
Sbjct: 186 DGLCKIGWTERAFRL 200
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ F + G+ EA ++ EMR+ GL V + N V R+ +E G A + M +
Sbjct: 9 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P + ++ +C +G++++V+ L+ M R G +LD + +++ CE+G ++V
Sbjct: 69 VSPMNRGFGALVV-VCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 127
Query: 457 MQIAHEMV 464
+ M+
Sbjct: 128 SEFFRRML 135
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 166/332 (50%), Gaps = 45/332 (13%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN+LL L+ + A F +++ + PDV ++ +I+G C++G ++ A ++ +
Sbjct: 47 YAYNNLLNTLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVE 106
Query: 219 VMT--------------------VK-------------------PNLLAYNTMINGFCKK 239
MT VK PN++ Y ++I+G+CK
Sbjct: 107 RMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKA 166
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G +++A N+M+ G RPN +TYN +I G ++ A + ++ L+ +V T
Sbjct: 167 GRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTF 226
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S++ G C G+ D A+ + + ++ P+V ++ ++I+ C +S EA+SLL+E+
Sbjct: 227 NSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNM 286
Query: 360 RG-LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
R + P F +N + IL + G++D A L++ M + C P+ +Y +I G CM KGR+
Sbjct: 287 RADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCM-KGRI 345
Query: 419 QDVEDLVDRMIRSGHNLD----FTMYSCLLKG 446
+ L +M+ +G D + SC+LK
Sbjct: 346 PEAVTLFHKMVETGCRPDNITINSFISCVLKA 377
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 115/242 (47%), Gaps = 10/242 (4%)
Query: 228 AYNTMINGFC-KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
+ + + G C G L+ A + + GCR YN ++ L +GR +A L
Sbjct: 12 GFFSFVAGSCTNAGLLDAAANLLTKGSWFGCRIEWYAYNNLLNTLIAHGRAQDAVALFES 71
Query: 287 MRLNG-FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+G + +V + ++KG+C VG +A+ + + E +PD + ++++G C++
Sbjct: 72 WIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLCRVK 131
Query: 346 KSDEAISLLKEMRARGL-KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
+ ++ +L+ ++ G+ P V ++ +V + G + A + M Q PN V+Y
Sbjct: 132 QVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTY 191
Query: 405 NTIICGLCMAKGRMQDVEDLVD---RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
N +I G G+ D+E V ++I D ++ L+ GYC G +++ M+I
Sbjct: 192 NVLINGY----GKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWM 247
Query: 462 EM 463
EM
Sbjct: 248 EM 249
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 161/335 (48%), Gaps = 40/335 (11%)
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNL 226
R +++ A E ++ K N+VP VS Y MI G C + A K+ + MT +KPN+
Sbjct: 326 REHNMGRALELLDEMEKRNLVPSAVS-YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNV 384
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
+ Y+T+I G+ +G +EEA++ ++ M G P+ YNA+I L G+++EA + +
Sbjct: 385 VVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLE 444
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR-------------------------N 321
++ G K + T + + G GK +A Y N
Sbjct: 445 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 504
Query: 322 VMEA----------NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
+MEA + PDV++ I+G K G+ EA+ + E++ +GL P VF++++
Sbjct: 505 LMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 564
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ + GE+++A L +M PN YN ++ GLC + G +Q L D M
Sbjct: 565 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS-GDIQRARKLFDGMPEK 623
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G D YS ++ GYC+ NV + HEM +K
Sbjct: 624 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK 658
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 179/384 (46%), Gaps = 18/384 (4%)
Query: 94 CYTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQA 149
CY AI L + A++ L K I Y G + A +F +
Sbjct: 421 CYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDE- 479
Query: 150 KQIENGACLYSYNSLLGVLV----RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
+++G L N L VL+ + ++ A F + V+P DV T + I G
Sbjct: 480 -MLDHG--LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLP-DVQTCSAFIHGLL 535
Query: 206 KMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNEL 262
K G ++ A KVF + K P++ Y+++I+GFCK+GE+E+A + +EM +G PN
Sbjct: 536 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 595
Query: 263 TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
YNA++ GLC +G + A+ L M G + + T+ +M+ G C +A +
Sbjct: 596 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 655
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ P Y +++G CK G ++A++L +EM +G T SFN + ++ ++
Sbjct: 656 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKI 714
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
A L ++M +P+ V+Y T+I C A G+M++ L M +D Y+
Sbjct: 715 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA-GKMEEANLLFKEMQERNLIVDTVTYTS 773
Query: 443 LLKGYCEEGNVENVMQIAHEMVTK 466
L+ GY + G V + +MV K
Sbjct: 774 LMYGYNKLGQSSEVFALFEKMVAK 797
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 180/411 (43%), Gaps = 74/411 (18%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+ Y N+ A+ + ++ SY +++ L + LA + ++
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P+V Y+T+I GY G IE A+++ D M+ V P++ YN +I+ K G++EEA
Sbjct: 380 L-KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN---------- 295
+ E+ RG +P+ +T+ A I G G++ EA +M +G N
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 498
Query: 296 -------------------------VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
V T + + GL G+ +A+ + E + PD
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V +Y +I+GFCK G+ ++A L EM +G+ P +F +NA+ L ++G++ RA L
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAK----------------------------------G 416
MP+ P+ V+Y+T+I G C ++ G
Sbjct: 619 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 678
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
M+ +L M++ G + ++ L+ GYC+ ++ Q+ EM+ K+
Sbjct: 679 DMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQ 728
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 148/304 (48%), Gaps = 5/304 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+Y + L R + A+ F ++ K + PD + + +I G+ + G I+ ++ D
Sbjct: 210 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGL-KPDYNACSALIDGFMREGDIDEVLRIKD 268
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
VM + NL+ YN +I+G CK G++E+A + + M+ GC+PN T+ +I G C
Sbjct: 269 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREH 328
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+ A L+ +M + ++ +M+ GLC A L + + + P+V Y
Sbjct: 329 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 388
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I G+ G+ +EA LL M G+ P +F +NA+ L + G+++ A L ++
Sbjct: 389 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 448
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ V++ I G G+M + D M+ G + +Y+ L+ G+ + GN+
Sbjct: 449 GLKPDAVTFGAFILGYS-KTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 507
Query: 456 VMQI 459
+ I
Sbjct: 508 ALSI 511
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 166/365 (45%), Gaps = 24/365 (6%)
Query: 104 SHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNS 163
S S++ +N S LI +Y G + A F AK +S
Sbjct: 137 SSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKN----------DS 186
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-- 221
+L L+R NS++ + E + P+ TYT + G C+ + AK F+ M
Sbjct: 187 ILISLIRCNSLR--------SMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKT 238
Query: 222 -VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
+KP+ A + +I+GF ++G+++E + + M++ G N +TYN +I+GLC G++++A
Sbjct: 239 GLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKA 298
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
++ M G K N T +++G C +A+ L + + N+ P SY +ING
Sbjct: 299 AEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMING 358
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
C A LL++M GLKP V ++ + G ++ A LL M P+
Sbjct: 359 LCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPD 418
Query: 401 FVSYNTIICGLCMAK-GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
YN II C++K G+M++ + + G D + + GY + G + +
Sbjct: 419 IFCYNAIIS--CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 476
Query: 460 AHEMV 464
EM+
Sbjct: 477 FDEML 481
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 135/297 (45%), Gaps = 25/297 (8%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---------------------VKPNLLAYNTMING 235
+ +I Y +MGM++ A VF V + PN Y + G
Sbjct: 159 FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAG 218
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
C+ + EAK EM G +P+ +A+I G G +DE + M G N
Sbjct: 219 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 278
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
+ T+ ++ GLC GK ++A L+ ++ P+ +++ ++I G+C+ A+ LL
Sbjct: 279 LITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLD 338
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
EM R L P+ S+ A+ L +L A LL++M PN V Y+T+I G ++
Sbjct: 339 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYA-SE 397
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLK 472
GR+++ L+D M SG D Y+ ++ + G +E E+ +GR LK
Sbjct: 398 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI---QGRGLK 451
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 171/391 (43%), Gaps = 42/391 (10%)
Query: 113 SLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC-LYSYNSLLGVLVR 170
S LK + D F S LI + +G V+ A F H ++ A ++ YN+L+ L +
Sbjct: 548 SELKEKGLVPDVFTYSSLISGFCKQGEVEKA-FELHDEMCLKGIAPNIFIYNALVDGLCK 606
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM----------------------- 207
I+ A + F + E + PD TY+TMI GYCK
Sbjct: 607 SGDIQRARKLFDGM-PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 665
Query: 208 ------------GMIENAKKVFDVMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
G +E A +F M K L++NT+I+G+CK +++EA + EM+
Sbjct: 666 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMI 725
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
+ P+ +TY +I C G+++EA +L +M+ + T+ S++ G +G+
Sbjct: 726 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSS 785
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ ++ + PD +Y +VI CK EA L E+ +G+ + +
Sbjct: 786 EVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 845
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L + +L A LL +M ++ P+ + +T++ A G+M + + + + G
Sbjct: 846 TALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEA-GKMDEATRVFEGVKSLGL 904
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D T L+ G + + E+ + ++V
Sbjct: 905 VPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935
>gi|357129487|ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Brachypodium distachyon]
Length = 837
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 195/435 (44%), Gaps = 62/435 (14%)
Query: 93 PCYTAITDVLLSHSLISIAASL---LKNSNKLSDF-FISKLIKAYGDRGNVK-AAIFWFH 147
P Y+ + + L I A L +K D + K+++A+ G+ A +F
Sbjct: 316 PMYSVLIEGLCQKKEIGKAVKLFEEMKRGEVAPDARLLKKMLEAFCREGDFAIAGLFINE 375
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK------------------ENV 189
A+Q++ + +N +L V + A + +++
Sbjct: 376 NARQLKPSGVIALFNVVLEGFVNHGQAEAAYQLLTSMIRGGQGISDGVTVGAHVVDISED 435
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
V P+ ++ ++ G CK+ ++NA + MT K LL +N +I+ C L+E
Sbjct: 436 VKPNSDSFNIVVCGLCKVKKLDNALALIKDMTGIGCKGKLLMFNDLIHELCSLDRLDEGY 495
Query: 247 KCMNEMMNRGCRPNELTYNAMIYG-----------------------------------L 271
K N M N G P+E TYN++ YG L
Sbjct: 496 KMFNLMKNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKNCTEMVQQL 555
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
CI+GR+ EA + +M GF ++ T+ + + GLC G+ D A+G R++ PDV
Sbjct: 556 CISGRITEALQFLDEMLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISSKYYLPDV 615
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
++ ++INGF GK EA +++EM +GL P++ ++N + + ++G +++AI L +
Sbjct: 616 VAHNILINGFRISGKLSEAQEVMEEMLEKGLFPSIVTYNLMIDVWCKSGNIEKAIACLNK 675
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + P V+Y ++I GLC + GR + L +M+ G + Y+ + G C+
Sbjct: 676 MIDEEESPTVVTYTSLIDGLC-STGRPDEAIALWHKMMDKGCAPNKIAYTAFVNGLCKRA 734
Query: 452 NVENVMQIAHEMVTK 466
V+ + EM+TK
Sbjct: 735 RVDTALTYYEEMMTK 749
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 123/226 (54%), Gaps = 4/226 (1%)
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYN 230
I A +F +++K +P D+ TY+ + G CK G ++NA +F ++ K P+++A+N
Sbjct: 561 ITEALQFLDEMLKMGFLP-DIVTYSAAMNGLCKTGEVDNALGIFRDISSKYYLPDVVAHN 619
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+INGF G+L EA++ M EM+ +G P+ +TYN MI C +G +++A + KM
Sbjct: 620 ILINGFRISGKLSEAQEVMEEMLEKGLFPSIVTYNLMIDVWCKSGNIEKAIACLNKMIDE 679
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
V T+ S++ GLC G+ D+A+ +M+ P+ +Y +NG CK + D A
Sbjct: 680 EESPTVVTYTSLIDGLCSTGRPDEAIALWHKMMDKGCAPNKIAYTAFVNGLCKRARVDTA 739
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++ +EM +G + FS L+ G + LLK++ Q D
Sbjct: 740 LTYYEEMMTKGFELDTFSCLYFINFLISTGNATKGCELLKEVLQKD 785
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 196/466 (42%), Gaps = 67/466 (14%)
Query: 35 NPSPKNISSQPLDQFS---------------LCLGSNIVTKVIYEQTNPYHALFFFNWAS 79
+PSP ++ LD+FS L + V V+ + HAL FF WA
Sbjct: 36 SPSPSFLAHHLLDEFSRPRATRDAARLRRLSAHLTAPAVESVLVRLPSWRHALDFFQWA- 94
Query: 80 NPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK---LSDFFISKLIKAYGDR 136
+ P + H+ + A+ +L H + ++ + L++ G
Sbjct: 95 --DEQPG-FRHSCYTFNAMASLLPRHQAAHLDRLAADALAACCPMTPGALGFLLRCLGAA 151
Query: 137 GNVKAAIFWFHQAKQIENGACL------YSYNSLLGVLVRVNSIKLAEEFFHQIV----K 186
G AA+ F A+ CL Y++N LL L + AE ++V
Sbjct: 152 GLPDAALLVFDGAR-----TCLSCTPNSYTFNCLLDTLAKAGRADDAEARLQEMVVRCGD 206
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAY--NTMINGFCKKGELEE 244
E+V D T T++++ YC G ++A VF+ M+ + + + + F K G+++
Sbjct: 207 ESV---DKYTLTSLLQCYCNAGRPDDANGVFERMSQRGWVDEHVLTILAVAFSKWGKVDG 263
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + + M G RP+E T + +++G R+D+A + KM GF + + +++
Sbjct: 264 AVELLGRMELLGMRPSEKTLSVLVHGFAKQLRLDKAMEMFDKMGSYGFVAGLPMYSVLIE 323
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS-LLKEMRARGLK 363
GLC + +AV + + PD + + ++ FC+ G D AI+ L AR LK
Sbjct: 324 GLCQKKEIGKAVKLFEEMKRGEVAPDARLLKKMLEAFCREG--DFAIAGLFINENARQLK 381
Query: 364 PT--VFSFNAVFRILVENGELDRAILLLKQMPQ-------------------MDCLPNFV 402
P+ + FN V V +G+ + A LL M + D PN
Sbjct: 382 PSGVIALFNVVLEGFVNHGQAEAAYQLLTSMIRGGQGISDGVTVGAHVVDISEDVKPNSD 441
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
S+N ++CGLC K ++ + L+ M G M++ L+ C
Sbjct: 442 SFNIVVCGLCKVK-KLDNALALIKDMTGIGCKGKLLMFNDLIHELC 486
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMI 233
A+E +++++ + P + TY MI +CK G IE A + M + P ++ Y ++I
Sbjct: 634 AQEVMEEMLEKGLFP-SIVTYNLMIDVWCKSGNIEKAIACLNKMIDEEESPTVVTYTSLI 692
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G C G +EA ++MM++GC PN++ Y A + GLC RVD A +M GF+
Sbjct: 693 DGLCSTGRPDEAIALWHKMMDKGCAPNKIAYTAFVNGLCKRARVDTALTYYEEMMTKGFE 752
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
+ + + L G + L+ V++ ++
Sbjct: 753 LDTFSCLYFINFLISTGNATKGCELLKEVLQKDIT 787
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 100/245 (40%), Gaps = 47/245 (19%)
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS--TH 299
+ A+ C++ C PN T+N ++ L GR D+A+ + +M + ++V T
Sbjct: 161 FDGARTCLS------CTPNSYTFNCLLDTLAKAGRADDAEARLQEMVVRCGDESVDKYTL 214
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S+L+ C G+ D A G + + D ++ F K GK D A+ LL M
Sbjct: 215 TSLLQCYCNAGRPDDANGVFERMSQRGW-VDEHVLTILAVAFSKWGKVDGAVELLGRMEL 273
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G++P+ + + + + LD+A+
Sbjct: 274 LGMRPSEKTLSVLVHGFAKQLRLDKAM--------------------------------- 300
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTR 479
++ D+M G MYS L++G C++ + +++ EM K+G + L +
Sbjct: 301 ---EMFDKMGSYGFVAGLPMYSVLIEGLCQKKEIGKAVKLFEEM--KRGEVAPDARLLKK 355
Query: 480 VVDAL 484
+++A
Sbjct: 356 MLEAF 360
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 179/378 (47%), Gaps = 39/378 (10%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
+ SL+++ + + ++ Y G++ AI Q + ++NS++
Sbjct: 263 EVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKF 322
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPN 225
+ I AEE+ ++V + + P V TY +I GY ++ + ++ + M KPN
Sbjct: 323 CEMQMIDKAEEWVKKMVGKGIAPS-VETYNILIDGYGRLCVFSRCFQILEEMEENGEKPN 381
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+++Y ++IN CK G++ EA+ + +M+ RG PN YN +I G C G++ EA
Sbjct: 382 VISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFD 441
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M NG + T+ S++KGLC +GK +A + PDV +Y +I+G+ G
Sbjct: 442 EMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAG 501
Query: 346 KSDEAISLLKEMRARGLKPTVFSF----------------------------------NA 371
S + + L + M+ GLKPT+ +F NA
Sbjct: 502 NSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNA 561
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ E G + +A L K+M M P+ +YN++I G + +G++ + +DLVD M
Sbjct: 562 MIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGH-LKEGKLSETKDLVDDMKAK 620
Query: 432 GHNLDFTMYSCLLKGYCE 449
G + YS L++G+C+
Sbjct: 621 GLIPEADTYSLLIQGHCD 638
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 172/348 (49%), Gaps = 47/348 (13%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y + V++ +KLA E F + + VVP +V Y +I G CK I +A+K+F M
Sbjct: 69 YGRAMLAAVKLGDLKLAMELFETMKRRKVVP-NVFVYNVLIGGLCKEKRIRDAEKLFGEM 127
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+V+ PN + +NT+I+G+CK GE++ A M P+ +T+N+++ GLC R+
Sbjct: 128 SVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRI 187
Query: 278 DEAKMLMAKMRLNGFKDNVSTH--------KS---------------------------- 301
+EA+ ++ +++ NGF + T+ KS
Sbjct: 188 EEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSI 247
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L GLC GK ++A L++++E + P Y ++NG+C+IG D AI +++M +RG
Sbjct: 248 LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG 307
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG---LCMAKGRM 418
L+P +FN+V E +D+A +K+M P+ +YN +I G LC+
Sbjct: 308 LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCF 367
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Q +++ M +G + Y L+ C++G + + +MV +
Sbjct: 368 Q----ILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGR 411
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 167/337 (49%), Gaps = 10/337 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y G V AI + K+ + + ++NSLL L + I+ A ++I K N
Sbjct: 142 LIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEI-KCN 200
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT------VKPNLLAYNTMINGFCKKGEL 242
PD TY+ + G K + A D+ VK + + ++NG CK+G++
Sbjct: 201 GFVPDGFTYSIIFDGLLKSD--DGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKV 258
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
E+A++ + ++ G P E+ YN ++ G C G +D A + + +M G + N S+
Sbjct: 259 EKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSV 318
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ C + D+A +++ ++ + P V++Y ++I+G+ ++ +L+EM G
Sbjct: 319 IDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGE 378
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KP V S+ ++ L ++G++ A ++L+ M LPN YN +I G C G++++
Sbjct: 379 KPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTV-GKLREAL 437
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
D M ++G Y+ L+KG C+ G ++ ++
Sbjct: 438 RFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEM 474
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 156/348 (44%), Gaps = 44/348 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI YG R V + F + + ENG + SY SL+ L + I AE +V
Sbjct: 353 LIDGYG-RLCVFSRCFQILEEME-ENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVG 410
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
V+P + + Y +I G C +G + A + FD M+ + ++ YN++I G CK G+L+
Sbjct: 411 RGVLP-NANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLK 469
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA++ + + G P+ +TYN++I G G + L M+ G K ++T ++
Sbjct: 470 EAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLI 529
Query: 304 KGL--------------------------------CV--VGKFDQAVGYLRNVMEANMNP 329
G C G +A + +++ + P
Sbjct: 530 SGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRP 589
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
D K+Y +I G K GK E L+ +M+A+GL P +++ + + + + + A +
Sbjct: 590 DNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWY 649
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG-HNLD 436
++M + LPN N + GL GR+Q+ + + MI +G NLD
Sbjct: 650 REMLENGFLPNVCICNELSTGL-RKDGRLQEAQSICSEMIANGMDNLD 696
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLIS--IAASLLKNSNKLSDFFISKLIKAYGDRGNVK 140
PN Y C +L + ++ + +L N+N + LI G ++
Sbjct: 380 PNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNAN-----IYNMLIDGSCTVGKLR 434
Query: 141 AAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTM 200
A+ +F + + GA + +YNSL+ L ++ +K AEE F I P DV TY ++
Sbjct: 435 EALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCP-DVITYNSL 493
Query: 201 IRGYCKMGMIENAKKVFDVM-------------------------------------TVK 223
I GY G + ++++ M +
Sbjct: 494 ISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLS 553
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+ + YN MI+ + + G +++A EM++ G RP+ TYN++I G G++ E K L
Sbjct: 554 PDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDL 613
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ M+ G T+ +++G C + F+ A + R ++E P+V + G K
Sbjct: 614 VDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRK 673
Query: 344 IGKSDEAISLLKEMRARGL 362
G+ EA S+ EM A G+
Sbjct: 674 DGRLQEAQSICSEMIANGM 692
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 35/242 (14%)
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
+P+ L Y + K G+L+ A + M R PN YN +I GLC R+ +A+
Sbjct: 63 RPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEK 122
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
L +M + N+ P+ ++ +I+G+C
Sbjct: 123 LFGEMSVR-----------------------------------NLVPNRVTFNTLIDGYC 147
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K G+ D AI L + M+ ++P++ +FN++ L + ++ A +L ++ +P+
Sbjct: 148 KAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGF 207
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+Y+ I GL + DL I G +D S LL G C+EG VE ++
Sbjct: 208 TYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKS 267
Query: 463 MV 464
+V
Sbjct: 268 LV 269
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 161/345 (46%), Gaps = 40/345 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y SL+ R +++ E +I K N+V TY T ++G C G ++ A +
Sbjct: 387 AYASLIEGFFREKNVRKGYELLVEIKKRNIVISPY-TYGTAVKGMCSSGDLDGAYNIVKE 445
Query: 220 MTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +PN++ Y T+I F +K +A + + EM +G P+ YN++I GL +
Sbjct: 446 MGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKK 505
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP------- 329
+DEA+ + +M NGFK + T+ + + G G+F A Y++ ++E + P
Sbjct: 506 MDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTG 565
Query: 330 ----------------------------DVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
D K+Y V++NG K GK ++A + EMR +G
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P VFS+ + + G + +A + +M Q N + YN ++ G C + G ++
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRS-GEIEKA 684
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++L+D M G + Y ++ GYC+ G++ Q+ EM K
Sbjct: 685 KELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLK 729
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 173/352 (49%), Gaps = 20/352 (5%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ LI Y +G V A F +E G +Y L+ LV+ + AEE FH++
Sbjct: 564 TGLINEYCKKGKVIEACSAFRS--MVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
+ + PDV +Y T+I G+ K+G ++ A +FD M + N++ YN ++ GFC+ GE
Sbjct: 622 -RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGE 680
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+E+AK+ ++EM +G PN +TY +I G C +G + EA L +M+L G + + +
Sbjct: 681 IEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTT 740
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS---YEVVINGFCKIGKSDEAISLLKEMR 358
++ G C + ++A+ + E N S + +IN K GK++ ++ +
Sbjct: 741 LVDGCCRLNDVERAI----TIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLM 796
Query: 359 ARGL----KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
KP ++N + L + G L+ A L M + + +P ++Y +++ G
Sbjct: 797 DGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGY-DK 855
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GR ++ + D +I +G D MYS ++ + +EG + + +M K
Sbjct: 856 MGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAK 907
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 171/382 (44%), Gaps = 51/382 (13%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LIK + + A+ + ++ + YNSL+ L + + A F ++V
Sbjct: 459 TTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMV- 517
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
EN PD TY I GY + G +A K M V PN + +IN +CKKG++
Sbjct: 518 ENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVI 577
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA M+ +G + TY ++ GL NG+V++A+ + +MR G +V ++ +++
Sbjct: 578 EACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLI 637
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G +G +A +++A + +V Y +++ GFC+ G+ ++A LL EM +G
Sbjct: 638 DGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFP 697
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE- 422
P ++ + ++G+L A L +M +P+ Y T++ G C R+ DVE
Sbjct: 698 PNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCC----RLNDVER 753
Query: 423 ------------------------------------DLVDRMI-----RSGHNLDFTMYS 441
D+++R++ + G D T Y+
Sbjct: 754 AITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVT-YN 812
Query: 442 CLLKGYCEEGNVENVMQIAHEM 463
++ C+EGN+E ++ H M
Sbjct: 813 IMIDYLCKEGNLEAAKELFHHM 834
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 154/318 (48%), Gaps = 13/318 (4%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F LI + GN++ A F + Q + + YN LLG R I+ A+E +
Sbjct: 631 FSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDE 690
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
+ + PP+ TY T+I GYCK G + A ++FD M +K P+ Y T+++G C+
Sbjct: 691 MSGKG-FPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLN 749
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF----KDNV 296
++E A E +GC + +NA+I + G+ + ++ ++ F K N
Sbjct: 750 DVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPND 808
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ M+ LC G + A ++ +AN+ P V +Y ++NG+ K+G+ E S+ E
Sbjct: 809 VTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDE 868
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK- 415
+ A G++P ++ + ++ G +A++LL QM + + + + C ++
Sbjct: 869 VIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGF 928
Query: 416 ---GRMQDVEDLVDRMIR 430
G M+ E +V+ M+R
Sbjct: 929 AKVGEMEVAEKVVENMVR 946
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 143/310 (46%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+ L+ L++ + A H++V D Y I K G +E AK +FD
Sbjct: 317 AYSILIDGLLKGRNADAANGLVHEMVSHGF-SIDPMMYDYFICVMSKEGAMEKAKALFDG 375
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P AY ++I GF ++ + + + + E+ R + TY + G+C +G
Sbjct: 376 MITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGD 435
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A ++ +M +G + NV + +++K +F AV L+ + E + PD Y
Sbjct: 436 LDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNS 495
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G K K DEA S L EM G KP F++ A +E GE A +K+M +
Sbjct: 496 LIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECG 555
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
+PN V +I C KG++ + M+ G D Y+ L+ G + G V +
Sbjct: 556 VIPNKVLCTGLINEYC-KKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDA 614
Query: 457 MQIAHEMVTK 466
+I HEM K
Sbjct: 615 EEIFHEMRGK 624
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 168/397 (42%), Gaps = 63/397 (15%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI Y ++G + A+F F K ++ L N LL L++ N + L + + +V+
Sbjct: 158 LIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVE 217
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---------------DVMTVK-------- 223
NVV DV +Y +I +C+ G ++ AK V + + +K
Sbjct: 218 RNVVF-DVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGL 276
Query: 224 -PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P+ +YN +I+G CK+ LE+AK + EM + G + + Y+ +I GL D A
Sbjct: 277 VPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANG 336
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF- 341
L+ +M +GF + + + + G ++A ++ + P ++Y +I GF
Sbjct: 337 LVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFF 396
Query: 342 ----------------------------------CKIGKSDEAISLLKEMRARGLKPTVF 367
C G D A +++KEM A G +P V
Sbjct: 397 REKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVV 456
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+ + + ++ A+ +LK+M + P+ YN++I GL AK +M + +
Sbjct: 457 IYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAK-KMDEARSFLLE 515
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
M+ +G D Y + GY E G + + EM+
Sbjct: 516 MVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEML 552
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 133/317 (41%), Gaps = 52/317 (16%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFC 237
FF+ + + V + +++ + C G IE A V M + P +++++
Sbjct: 83 FFNLVDSQKVTEQKLDSFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVWSSIV---- 138
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD--- 294
+C+ E + + +++G+ I+G +++ + A + KD
Sbjct: 139 ---------RCLREFVGKS------DDRVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDL 183
Query: 295 ----NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS--- 347
+++ +L L + D + ++E N+ DV+SYE++I C+ G
Sbjct: 184 DLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLA 243
Query: 348 ------------------DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
DEA+ L K M +GL P+ S+N + L + L+ A LL
Sbjct: 244 KDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLL 303
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED-LVDRMIRSGHNLDFTMYSCLLKGYC 448
+M + + V+Y+ +I GL KGR D + LV M+ G ++D MY +
Sbjct: 304 VEMNSVGLFADNVAYSILIDGLL--KGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMS 361
Query: 449 EEGNVENVMQIAHEMVT 465
+EG +E + M+T
Sbjct: 362 KEGAMEKAKALFDGMIT 378
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 163/331 (49%), Gaps = 5/331 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G +G+++ F + ++ + YNS++ L + S A Q+
Sbjct: 280 LINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASG 339
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
PD+ T+ T+I G C G + A+ + PN L+Y +I+GFC +GEL A
Sbjct: 340 C-DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAA 398
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ EMM RG P+ +T+ A+I+GL + G+V EA ++ KM +V+ + ++ G
Sbjct: 399 SDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISG 458
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC A L ++E N+ PD Y +I+GF + +A + + M +G++P
Sbjct: 459 LCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPD 518
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ S NA+ + + G + AIL + M ++ C+P+ +Y T+I G +G + +
Sbjct: 519 IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY-AKQGNLNGALRWL 577
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
MI+ + YS L+ GYC+ G+ ++
Sbjct: 578 CDMIKRKCKPNVVTYSSLINGYCKTGDTDSA 608
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 196/453 (43%), Gaps = 62/453 (13%)
Query: 67 NPYHALFFFNWASNPN-----PNPNKYHHTTPC--------YTAITDVLLSHSLISIAAS 113
+P A+ +W+ +P+ +P H+T + A+ D L S SL A +
Sbjct: 73 DPDLAVALLSWSQSPDHHVALQDPTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPT 132
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNV-KAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+ L+ AY D G + KA +Q + + N LL +LV
Sbjct: 133 ---------RACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQR 183
Query: 173 SIKLAEEFFHQIVKENVVPPDVST----------------------------------YT 198
A + + +++ E+ + ST Y
Sbjct: 184 RWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYN 243
Query: 199 TMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
+I GYC+ G + + M K P L+ Y ++IN KKG+LE+ EM R
Sbjct: 244 VLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKR 303
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G PN YN++I LC +A +++ +M +G ++ T +++ GLC G +A
Sbjct: 304 GLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKA 363
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+LR + +NP+ SY +I+GFC G+ A LL EM RG P V +F A+
Sbjct: 364 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHG 423
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
LV G++ A+++ ++M + P+ YN +I GLC K + +++++ M+
Sbjct: 424 LVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC-KKHMLPAAKNILEEMLEKNVQP 482
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
D +Y+ L+ G+ N+ + +I E + KG
Sbjct: 483 DEFVYATLIDGFIRSENLGDARKI-FEFMEHKG 514
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 164/346 (47%), Gaps = 5/346 (1%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
F + LI Y RG++ + + + L +Y SL+ L + ++ F ++
Sbjct: 241 FYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEM 300
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGE 241
K + P+V Y ++I CK A + M P+++ +NT+I G C +G
Sbjct: 301 RKRGL-SPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH 359
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ +A+ + E + R PN+L+Y +I+G C+ G + A L+ +M G +V T +
Sbjct: 360 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGA 419
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GL V GK +A+ + E + PDV Y V+I+G CK A ++L+EM +
Sbjct: 420 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKN 479
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
++P F + + + + L A + + M P+ VS N +I G C G M +
Sbjct: 480 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQF-GMMSEA 538
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ M + G D Y+ ++ GY ++GN+ ++ +M+ +K
Sbjct: 539 ILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 584
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 151/298 (50%), Gaps = 7/298 (2%)
Query: 117 NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKL 176
N N+LS + LI + RG + AA + + + ++ +L+ LV +
Sbjct: 376 NPNQLS---YTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSE 432
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMI 233
A + + E V PDV+ Y +I G CK M+ AK + + M V+P+ Y T+I
Sbjct: 433 AL-IVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLI 491
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+GF + L +A+K M ++G RP+ ++ NAMI G C G + EA + M+ MR G
Sbjct: 492 DGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCI 551
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ T+ +++ G G + A+ +L ++++ P+V +Y +ING+CK G +D A L
Sbjct: 552 PDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGL 611
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
M+A L P V ++ + L + ++ RA L + M C PN V+ + ++ GL
Sbjct: 612 FANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 669
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 54/305 (17%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN L+ L + + + A+ +++++NV PD Y T+I G+ + + +A+K+F+ M
Sbjct: 452 YNVLISGLCKKHMLPAAKNILEEMLEKNV-QPDEFVYATLIDGFIRSENLGDARKIFEFM 510
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V+P++++ N MI G+C+ G + EA CM+ M GC P+E TY +I G G +
Sbjct: 511 EHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNL 570
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV- 336
+ A + M K NV T+ S++ G C G D A G N+ ++P+V +Y +
Sbjct: 571 NGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTIL 630
Query: 337 ---------------------------------------------VINGFC----KIGKS 347
VIN C ++
Sbjct: 631 IGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGK 690
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
D + + K++ P ++NA+ L + L A+ +M + +PN +++ ++
Sbjct: 691 DALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSL 750
Query: 408 ICGLC 412
+ G C
Sbjct: 751 LYGFC 755
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 116/267 (43%), Gaps = 31/267 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IK Y G + AI +++ ++Y +++ + ++ A + ++K
Sbjct: 525 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 584
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
P+V TY+++I GYCK G ++A+ +F M + PN++ Y +I KK ++ A
Sbjct: 585 C-KPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 643
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGL-----CINGRV----------DEAKMLMAKMRLN 290
M+ C PN++T + ++ GL C+ + D ++ K+ +
Sbjct: 644 GLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFD 703
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
S + +++ LC +A+ + + + P+ ++ ++ GFC +GKS
Sbjct: 704 IGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKS--- 760
Query: 351 ISLLKEMRARGLKPTVF---SFNAVFR 374
M R + P F F +FR
Sbjct: 761 ------MNWRTILPNEFQQEEFEIIFR 781
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 23/170 (13%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI Y G+ +A F + + +Y L+G L + + + A +F ++
Sbjct: 593 SSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLL 652
Query: 187 ENVVPPDVSTY--------------------TTMIRGYCKMGMIENAKKVFDVMTVKPNL 226
+ P DV+ + T+ + G + ++ K VFD+ P
Sbjct: 653 NHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDAL-LVVFKKLVFDIG--DPRN 709
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
AYN +I C+ L EA N M +G PN +T+ +++YG C G+
Sbjct: 710 SAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 759
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 197/407 (48%), Gaps = 27/407 (6%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----------------------KNSN 119
+P + + HT Y + L +H ++ A +L+ K +
Sbjct: 3 SPTNSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQ 62
Query: 120 KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEE 179
+ + S LI AY + G + A+ F ++ + + +L +++ K
Sbjct: 63 RSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWG 122
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
F+ +I+ E P + + ++ +CK G + A+ VFD +T ++P+++++NT++NG+
Sbjct: 123 FYKEIL-ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGY 181
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
+ G+L+E + + M G +P+ TY+ +I GLC ++++A L +M NG N
Sbjct: 182 IRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNG 241
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T +++ G C G D A+ + ++ +PD+ +Y +I G CK G +A L+ E
Sbjct: 242 VTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDE 301
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +GLKP ++ + + G+L+ A K+M + + + V+Y +I GLC +G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLC-REG 360
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ E ++ M+ G D Y+ ++ +C++G+V+ ++ EM
Sbjct: 361 QSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEM 407
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 152/284 (53%), Gaps = 6/284 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FH 182
+F + L+ + G ++ A F + + + S+N+L+ +R+ L E F
Sbjct: 137 YFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGD--LDEGFRLK 194
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
+ + + PDV TY+ +I G CK + +A ++FD M + PN + + T+I+G CK
Sbjct: 195 SAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKT 254
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G ++ A + EM+ +G P+ +TYN +IYGLC G + +A+ L+ +M + G K + T+
Sbjct: 255 GSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITY 314
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ G C G + A Y + +++ N+ D +Y +I+G C+ G+S A +L+EM +
Sbjct: 315 TTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLS 374
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GLKP ++ + + G++ LLK+M + +P V+
Sbjct: 375 VGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 162/322 (50%), Gaps = 17/322 (5%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEE 179
+ F ++ L+ G V AA + K++ + L SYN L L + + I A
Sbjct: 106 TTFIVNMLVSCLCKNGKVDAA---YELYKRLSDECSLDRISYNMLTYGLCKADQIDRALA 162
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM-------TVKPNLLAYNTM 232
F ++ +EN V P + TY ++ GYC+ G +E A + + M V P++ +YNT+
Sbjct: 163 VFGEM-EENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTV 221
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
I+GFCK +L A+ + M+ GC PN +T+N ++ GLC+ G++DEA + M
Sbjct: 222 ISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNC 281
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ T+ ++ G + D+A Y +++ + P+V +Y +I G C K ++A+
Sbjct: 282 EPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALE 341
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM---PQMDCLPNFVSYNTIIC 409
+LK M + G +P V ++ V L + G+++RA L C P+ +Y+TI+
Sbjct: 342 ILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVY 401
Query: 410 GLCMAKGRMQDVEDLVDRMIRS 431
LC ++ E + RM+ S
Sbjct: 402 WLCRQSKFLEAYEYFL-RMVES 422
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 170/343 (49%), Gaps = 12/343 (3%)
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
A+Q + +++YN+ L LV+ A + F ++ + +P ++ TY ++RG C
Sbjct: 28 ARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLP-NIYTYGIVLRGLCDDA 86
Query: 209 MIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
+ A ++ M K P N +++ CK G+++ A + + + C + ++YN
Sbjct: 87 KTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDE-CSLDRISYN 145
Query: 266 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME- 324
+ YGLC ++D A + +M N ++ T+ +L G C G+ +QA+ L ++E
Sbjct: 146 MLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEG 205
Query: 325 ---ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
+++ PD+ SY VI+GFCK + A +L+ M G P V +FN + L G+
Sbjct: 206 KKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGK 265
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
LD A + + M + +C P V+Y +I G A R+ D M+R G + Y+
Sbjct: 266 LDEANAMFEYMVERNCEPTAVTYTVLITGHARAL-RIDKANDYFVDMLRRGVEPNVYTYT 324
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
L+ G C+ VE+ ++I M + GR + + TRV+ AL
Sbjct: 325 ALIGGLCDANKVEDALEILKRM-SSTGREPNVVTY-TRVIGAL 365
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+LL L + A F +V+ N P V TYT +I G+ + I+ A F
Sbjct: 252 TFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAV-TYTVLITGHARALRIDKANDYFVD 310
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V+PN+ Y +I G C ++E+A + + M + G PN +TY +I LC G+
Sbjct: 311 MLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQ 370
Query: 277 VDEAKMLMAKM---RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
++ A L R K + + +++ LC KF +A Y ++E+ +
Sbjct: 371 IERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHI 430
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLK 363
Y+ + +G + ++++ + E A G++
Sbjct: 431 YKAMADGLELVQETEKVERVCLEASAHGIE 460
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y +L+G L N ++ A E ++ P+V TYT +I CK G IE A K+F
Sbjct: 320 VYTYTALIGGLCDANKVEDALEILKRMSSTGR-EPNVVTYTRVIGALCKGGQIERATKLF 378
Query: 218 -DVM-----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
D M KP+ AY+T++ C++ + EA + M+ Y AM GL
Sbjct: 379 NDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGL 438
>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
Length = 709
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 163/346 (47%), Gaps = 37/346 (10%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
SY +++ L + + ++ + + PD TY +I G K G + A
Sbjct: 270 SYFTVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRE 329
Query: 218 -DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ + + + Y+ +++ FC G + EAK+ + EM+++GCRP+ +TY+A++ G C G
Sbjct: 330 SEGKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGE 389
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D+A+ +M M NG K N TH ++L GLC VGK +A L E P +Y V
Sbjct: 390 LDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSV 449
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++GF + GK E+ ++ +M +G PT N + L + + RA ++Q
Sbjct: 450 IMHGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKG 509
Query: 397 CLPNFVSYNTIICGLCMA----------------------------------KGRMQDVE 422
C N V++ T+I G KG+M++
Sbjct: 510 CFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEAT 569
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
LV++M+ G Y ++ YCE+G VE+++ + +M+TK+G
Sbjct: 570 ALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLTKQG 615
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 143/289 (49%), Gaps = 7/289 (2%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
Q+++++ PD+ + G ++ A + + M V P+++ YN +I G C
Sbjct: 187 QLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERMRRVGVDPDVVTYNCLIKGLCGA 246
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG--FKDNVS 297
+ EA + + M+ GC P++++Y ++ LC RV E L+ +MR + F D +
Sbjct: 247 RRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQI- 305
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++ GL G D+A+ +LR D Y +++ FC G+ EA ++ EM
Sbjct: 306 TYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEM 365
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
++G +P V +++AV GELD+A ++K M + C PN V++ ++ GLC G+
Sbjct: 366 ISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKV-GK 424
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +L+++ YS ++ G+ EG + + +M+ K
Sbjct: 425 SSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQK 473
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 149/304 (49%), Gaps = 5/304 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G+ A+ + +++ Y++++ + A+E +++ +
Sbjct: 310 LIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKG 369
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
PDV TY+ ++ G+C++G ++ A+K+ M KPN + + ++NG CK G+ EA
Sbjct: 370 C-RPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEA 428
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +N+ P+ +TY+ +++G G++ E+ ++ +M GF ++
Sbjct: 429 WELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHA 488
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC K +A ++ +V ++ VI+GF + G + A+SLL +M P
Sbjct: 489 LCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPD 548
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V ++ V L G++ A L+++M LP V+Y T+I C KG ++D+ +L+
Sbjct: 549 VVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYC-EKGAVEDLLNLL 607
Query: 426 DRMI 429
D+M+
Sbjct: 608 DKML 611
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 116/236 (49%), Gaps = 2/236 (0%)
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
+ ++ + + G+L A + + M GC P+ N + L + GRVD+A +MR
Sbjct: 166 FAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERMR 225
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G +V T+ ++KGLC + +A+ + ++++ PD SY V++ CK +
Sbjct: 226 RVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVA 285
Query: 349 EAISLLKEMR-ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
E +LL+ MR G+ P ++N + L ++G D A+ L++ + V Y+ I
Sbjct: 286 EVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAI 345
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ C+ GRM + ++++ MI G D YS ++ G+C G ++ ++ M
Sbjct: 346 VHSFCL-NGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHM 400
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 8/209 (3%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N L+ L + A++F Q + +V +TT+I G+ + G +E+A + D M
Sbjct: 483 NLLIHALCKEQKPARAKDFMEQCQSKGCFI-NVVNFTTVIHGFSRQGDLESALSLLDDMY 541
Query: 222 V---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ P+++ Y +++ +KG+++EA + +M+NRG P +TY +I+ C G V+
Sbjct: 542 LTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVE 601
Query: 279 EAKMLMAKMRL-NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+ L+ KM GF S + +++ LC GK +A L V+ + D ++ ++
Sbjct: 602 DLLNLLDKMLTKQGFS---SAYNQVIEKLCAFGKLSEAYNLLSKVLRSASKRDAQTCHIL 658
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTV 366
++ F G ++ ++ M R L P +
Sbjct: 659 MDSFLNRGLPLQSYNVACRMFQRNLIPDL 687
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
GK A+ L+ + + PD+ V +N G+ D+A+ + MR G+ P V +
Sbjct: 176 AGKLRSAMRVLQLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERMRRVGVDPDVVT 235
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + + L + A+ ++ M Q C P+ +SY T++ LC K R+ +V +L++RM
Sbjct: 236 YNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEK-RVAEVWNLLERM 294
Query: 429 IR-SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+G D Y+ L+ G + G+ + + E K+ R+
Sbjct: 295 RNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRV 337
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 159/308 (51%), Gaps = 7/308 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+LL + + + E ++++NVV +V+TYT +I Y + IE A+K+FD
Sbjct: 229 TYNTLLNGYIEIKDVGGVNEILS-LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDE 287
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++P++ Y ++IN CK G ++ A +EM R PN TY A+I G C G
Sbjct: 288 MLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGE 347
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPDVKSYE 335
+ A+M++ M+ G N +++ G C G D+A+ L+N+M+ D +
Sbjct: 348 MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEAL-RLQNIMQQKGFEIDAFTCN 406
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++ +GFC+ + +EA LL M RG+ P V SF+ + I + A L K M +
Sbjct: 407 IIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKK 466
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ V+YN I C KG+M++ L++ M G D Y+ L+ G GNV+
Sbjct: 467 GKAPSVVTYNAFIERYC-KKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDR 525
Query: 456 VMQIAHEM 463
+++ +EM
Sbjct: 526 ALELFNEM 533
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 156/318 (49%), Gaps = 18/318 (5%)
Query: 143 IFWFHQAKQIENGACL-------------YSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
I W+ ++ +IE L Y Y S++ + ++K A F ++ + +
Sbjct: 269 IEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRL 328
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAK 246
VP + TY +I G CK G ++ A+ + + M K N + +NT+++G+CKKG ++EA
Sbjct: 329 VP-NAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEAL 387
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ N M +G + T N + G C + R +EAK L+ M G NV + ++
Sbjct: 388 RLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIY 447
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C F +A + + + P V +Y I +CK GK +EA L+ EM+ RGL P
Sbjct: 448 CKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDT 507
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+++ ++ +G +DRA+ L +MPQ+ N V+Y II GL GR + L D
Sbjct: 508 YTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLS-KDGRADEAFKLYD 566
Query: 427 RMIRSGHNLDFTMYSCLL 444
M + G D +YS L+
Sbjct: 567 EMNKEGIVPDDGIYSSLI 584
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 143/297 (48%), Gaps = 8/297 (2%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS- 195
GN+K A F + + Y+Y +L+ + +K AE + + + V DV+
Sbjct: 311 GNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGV---DVNR 367
Query: 196 -TYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNE 251
+ T++ GYCK GMI+ A ++ ++M K + N + +GFC+ EEAK+ +
Sbjct: 368 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLT 427
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M RG PN ++++ +I C EA+ L M G +V T+ + ++ C GK
Sbjct: 428 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 487
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
++A + + E + PD +Y +I+G G D A+ L EM GL V ++
Sbjct: 488 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 547
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ L ++G D A L +M + +P+ Y+++I L + +E++VDR+
Sbjct: 548 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRI 604
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 144/281 (51%), Gaps = 7/281 (2%)
Query: 191 PPDVSTYTTMI-RGYCKMGMIENAKKVFDVMTVKPNLLAYNTMIN---GFCKKGELEEAK 246
P V + M+ R Y M +++ +VFD K + + + G +E
Sbjct: 118 PSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCV 177
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + +M++ G ++ A++ GLC G V AK LM ++ GFK +V T+ ++L G
Sbjct: 178 EFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGY 237
Query: 307 CVVGKFDQAVGYLRNVMEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+ K V + ++ME N ++ +V +Y ++I + + K +EA L EM +G++P
Sbjct: 238 IEI-KDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPD 296
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V+ + ++ + G + RA +L +M + +PN +Y +I G C A G M+ E +V
Sbjct: 297 VYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA-GEMKAAEMMV 355
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M G +++ +++ L+ GYC++G ++ +++ + M K
Sbjct: 356 NDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQK 396
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
++ +++G CKKGE+ AK M+E++ +G +P+ +TYN ++ G V +++ M
Sbjct: 194 SWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLM 253
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
N NV+T+ +++ K ++A +++ + PDV Y +IN CK G
Sbjct: 254 EKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNM 313
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
A L EM R L P +++ A+ + GE+ A +++ M N V +NT+
Sbjct: 314 KRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTL 373
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G C KG + + L + M + G +D + + G+C E ++ M
Sbjct: 374 MDGYC-KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTM 428
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 267 MIYGLCINGRV-DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
M++ + ++ R+ D + + R GF+ + + L L G + V +LR ++++
Sbjct: 127 MLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDS 186
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ V S+ V++G CK G+ A +L+ E+ +G KP+V ++N + +E ++
Sbjct: 187 GIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGV 246
Query: 386 ILLLKQMPQMDCLPNFVSYN----TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+L M + N V YN T++ ++++ E L D M++ G D +Y+
Sbjct: 247 NEILSLMEK-----NVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 301
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKK 467
++ C+ GN++ + EM ++
Sbjct: 302 SIINWNCKFGNMKRAFVLFDEMTERR 327
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 197/439 (44%), Gaps = 45/439 (10%)
Query: 30 RLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYH 89
RL P SP +SS P + N V + Q A F P
Sbjct: 58 RLVPLPESPALLSSLP--SVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRP---- 111
Query: 90 HTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQA 149
T YT + L + A LL++ ++A G R +V
Sbjct: 112 -TAVSYTTLMRALCAERRTGQAVGLLRD------------MQASGVRPDV---------- 148
Query: 150 KQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
+Y +L+ L + A E ++ E+ + P+V Y+ +++GYCK G
Sbjct: 149 ---------VTYGTLIRGLCDAADVDKAVELLREMC-ESGIEPNVVVYSCLLQGYCKAGR 198
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
E KVF+ M+ ++P+++ Y +I+ C++G++++A + M++MM RG PN +TYN
Sbjct: 199 WECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNV 258
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM--E 324
+I +C G V EA L M G + T+ +++ GL V + D+A+G L ++ E
Sbjct: 259 LINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGE 318
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P+V ++ VI+G CK G+ +A + M G + +FN + L+ ++ +
Sbjct: 319 TMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKK 378
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A+ L+ +M P+ +Y+ +I G C ++ E L+ +M R G + Y LL
Sbjct: 379 AMELMDEMASSGLEPDSFTYSILINGFC-KMWQVDRAESLLSKMRRDGIEPELVHYIPLL 437
Query: 445 KGYCEEGNVENVMQIAHEM 463
CE+G +E EM
Sbjct: 438 AALCEQGMMEQARNFFDEM 456
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 169/329 (51%), Gaps = 20/329 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLL----GVLVRVNSIKLAEEFFH 182
LI + G+VK A+ + +E G L +YN+L+ GVL ++ L EE H
Sbjct: 259 LINSMCKEGSVKEAMSL--RNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
E +V P+V T+ ++I G CK G + A +V D+M NL+ +N +I G +
Sbjct: 317 ---GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRV 373
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
++++A + M+EM + G P+ TY+ +I G C +VD A+ L++KMR +G + + +
Sbjct: 374 HKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHY 433
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+L LC G +QA + + M N DV +Y +I+G C++ A LK M
Sbjct: 434 IPLLAALCEQGMMEQARNFF-DEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLD 492
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
GL P +++ + + +G+L A +LKQM +P+ ++++I G AKG +
Sbjct: 493 EGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYG-AKGDTE 551
Query: 420 DVEDLVDRMIRSGHNLD----FTMYSCLL 444
V +L+ M LD T+Y+CL+
Sbjct: 552 KVLELIREMTAKDIALDSKIISTIYTCLV 580
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 127/240 (52%), Gaps = 1/240 (0%)
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+ ++YNT++ C++G +A + +M RP ++Y ++ LC R +A L+
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M+ +G + +V T+ ++++GLC D+AV LR + E+ + P+V Y ++ G+CK
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G+ + + +EM RG++P V + + L G++ +A ++ +M + PN V+Y
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
N +I +C +G +++ L + M+ G LD Y+ L+ G ++ M + EM+
Sbjct: 257 NVLINSMC-KEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 144/313 (46%), Gaps = 41/313 (13%)
Query: 193 DVSTYTTMIRGYCKMG-MIENAKKVFDVMT--VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D +Y T++ C+ G ++ A + VM +P ++Y T++ C + +A +
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M G RP+ +TY +I GLC VD+A L+ +M +G + NV + +L+G C
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G+++ + + PDV Y +I+ C+ GK +A ++ +M RGL+P V ++
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256
Query: 370 NAVFRILVENG-----------------------------------ELDRAILLLKQMPQ 394
N + + + G E+D A+ LL++M
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316
Query: 395 MDCL--PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ + PN V++N++I GLC GRM+ + D M +G + ++ L+ G
Sbjct: 317 GETMVEPNVVTFNSVIHGLC-KTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK 375
Query: 453 VENVMQIAHEMVT 465
V+ M++ EM +
Sbjct: 376 VKKAMELMDEMAS 388
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 126/249 (50%), Gaps = 10/249 (4%)
Query: 153 ENG-AC-LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
ENG AC L ++N L+G L+RV+ +K A E ++ + PD TY+ +I G+CKM +
Sbjct: 353 ENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGL-EPDSFTYSILINGFCKMWQV 411
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A+ + M ++P L+ Y ++ C++G +E+A+ +EM ++ C+ + + Y+ M
Sbjct: 412 DRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTM 470
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I+G C A+ + M G + T+ ++ G A L+ + +
Sbjct: 471 IHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGF 530
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PDV ++ +I G+ G +++ + L++EM A+ + + ++ LV N E
Sbjct: 531 VPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVANNE---GKA 587
Query: 388 LLKQMPQMD 396
LL+ +P D
Sbjct: 588 LLQSVPGFD 596
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 168/344 (48%), Gaps = 10/344 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+I + ++G + +FW+ K +E G L ++ SL+ L + SIK A E ++VK
Sbjct: 272 MISTFCEKG-FASRVFWYFD-KWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVK 329
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGEL 242
+ P+V T+T +I G CK G E A ++F + KPN+ Y +MI+G+CK+ +L
Sbjct: 330 KGW-KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKL 388
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
A+ ++ M +G PN TY +I G G ++A LM M GF N+ T+ +
Sbjct: 389 NRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAF 448
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ LC G+F +A L+ + D +Y ++I+ C+ + EA+ +M G+
Sbjct: 449 IDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGV 508
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+P + ++N + ++ + L + + +P +Y ++ICG C + ++
Sbjct: 509 QPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALK 568
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+RM G D Y L+ G C+E ++ Q+ MV K
Sbjct: 569 -FFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDK 611
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 220/502 (43%), Gaps = 80/502 (15%)
Query: 17 QSILVTSITSVI-QRLNPQNP------SPK-NISSQPLDQFSLCLGSNIVTKVIYEQTNP 68
Q LV SI S++ + + Q P SP N+S P D + +V + E
Sbjct: 64 QQSLVRSICSLVCESYSQQTPHVRLLQSPSINLSVNP-DSLTHEQAITVVASLASE-AGS 121
Query: 69 YHALFFFNWASN-PNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSN-KLSDFFI 126
AL FFNWA P K+ + Y I A S + N N + + +
Sbjct: 122 MVALSFFNWAIGFP-----KFRYFMRFY------------IVCATSFIGNENFERAHEVM 164
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGA---CLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+++ + + G + A+ + ++EN + + N + GV + + AE F +
Sbjct: 165 DCMVRVFAEIGKFQEAV---NMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDE 221
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIEN------------------------------- 212
+ V P VS Y M YC+MG I +
Sbjct: 222 MRVRGVCPDSVS-YKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKG 280
Query: 213 -AKKVFDV------MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYN 265
A +VF + +KPNL+ + ++ING CK+G +++A + + EM+ +G +PN T+
Sbjct: 281 FASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHT 340
Query: 266 AMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
A+I GLC G ++A L K+ R + +K NV T+ SM+ G C K ++A L + E
Sbjct: 341 ALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKE 400
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P+ K+Y +I+G K G ++A L+ M G +F++NA L + G
Sbjct: 401 QGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLE 460
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV--DRMIRSGHNLDFTMYSC 442
A LLK+ ++ + V+Y +I LC R E LV +M ++G D Y+
Sbjct: 461 ACKLLKKGFRLGLQADTVTYTILISELCR---RADTREALVFFSKMFKAGVQPDMHTYNT 517
Query: 443 LLKGYCEEGNVENVMQIAHEMV 464
L+ + + +E ++ E V
Sbjct: 518 LIAAFSRQRRMEESEKLFAEAV 539
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 131/273 (47%), Gaps = 6/273 (2%)
Query: 200 MIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTM--INGFCKK-GELEEAKKCMNEMMNRG 256
M+R + ++G + A + M +L T+ + G + G + A+ +EM RG
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRG 226
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
P+ ++Y M C GR+ + + M GF + +T M+ C G +
Sbjct: 227 VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVF 286
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
Y +E + P++ ++ +ING CK G +A +L+EM +G KP V++ A+ L
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346
Query: 377 VENGELDRAI-LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
+ G ++A L LK + D PN +Y ++I G C + ++ E L+ RM G
Sbjct: 347 CKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYC-KEDKLNRAEMLLSRMKEQGLVP 405
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ Y+CL+ G+ + GN E ++ +++ K+G
Sbjct: 406 NTKTYTCLIDGHSKAGNFEKAYELM-DLMGKEG 437
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 151/379 (39%), Gaps = 42/379 (11%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ LI RG++K A + + +Y++ +L+ L + + A F ++V
Sbjct: 304 FTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 363
Query: 186 KENVVPPDVSTYTTMIRGYCK----------------MGMIENAK--------------- 214
+ + P+V TYT+MI GYCK G++ N K
Sbjct: 364 RSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNF 423
Query: 215 -KVFDVMTV------KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
K +++M + N+ YN I+ CKKG EA K + + G + + +TY +
Sbjct: 424 EKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTIL 483
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I LC EA + +KM G + ++ T+ +++ + +++ + +
Sbjct: 484 ISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGL 543
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P ++Y +I G+C+ A+ M G P ++ A+ L + +LD A
Sbjct: 544 VPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQ 603
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L + M P V+ T+ C + D + + R L + L++
Sbjct: 604 LYEAMVDKGLSPCEVTRLTLAYEYC----KQDDSATAMVILERLDKKLWIRTVNTLIRKL 659
Query: 448 CEEGNVENVMQIAHEMVTK 466
C E V + H+++ K
Sbjct: 660 CSERKVGMAVLFFHKLLDK 678
>gi|242041019|ref|XP_002467904.1| hypothetical protein SORBIDRAFT_01g036150 [Sorghum bicolor]
gi|241921758|gb|EER94902.1| hypothetical protein SORBIDRAFT_01g036150 [Sorghum bicolor]
Length = 558
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 140/255 (54%), Gaps = 3/255 (1%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
VS Y ++ + G A +F M V P+ ++ T + C++G +EAK ++EM+
Sbjct: 146 VSDYNDILSALARAGDHATAVALFRAMPVAPDAQSFATAVQCLCRQGAPDEAKLAIDEMV 205
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG RP+ T++A++ LC GRV +A + MR G + + ++ S++ GLC VG+ +
Sbjct: 206 ARGFRPSVATFSAVVGCLCKRGRVTKAMEVFDAMRALGCEPTIRSYNSLVGGLCYVGRLE 265
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ L + ++ M PD+ ++ +V++GFCK+G+++EA ++ + GL PT+F++NA+
Sbjct: 266 EALDLLNKLKDSPMTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTIFTYNALL 325
Query: 374 RILVENGELDRAILLLKQMPQMD--CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ G +A LL +M D C P+ +S+ ++ L A G RM R+
Sbjct: 326 NGHCKEGNPLKAFALLMEMCGNDAACPPDKISFGIVLTALLRA-GETSAAWQTYKRMERA 384
Query: 432 GHNLDFTMYSCLLKG 446
G +D L++G
Sbjct: 385 GFEVDGRALDTLVRG 399
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 158/333 (47%), Gaps = 15/333 (4%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN +L L R A F + V PD ++ T ++ C+ G + AK D M
Sbjct: 149 YNDILSALARAGDHATAVALFRAMP----VAPDAQSFATAVQCLCRQGAPDEAKLAIDEM 204
Query: 221 TV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+P++ ++ ++ CK+G + +A + + M GC P +YN+++ GLC GR+
Sbjct: 205 VARGFRPSVATFSAVVGCLCKRGRVTKAMEVFDAMRALGCEPTIRSYNSLVGGLCYVGRL 264
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA L+ K++ + ++ T +L G C VG+ ++A + + ++P + +Y +
Sbjct: 265 EEALDLLNKLKDSPMTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTIFTYNAL 324
Query: 338 INGFCKIGKSDEAISLLKEM--RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+NG CK G +A +LL EM P SF V L+ GE A K+M +
Sbjct: 325 LNGHCKEGNPLKAFALLMEMCGNDAACPPDKISFGIVLTALLRAGETSAAWQTYKRMERA 384
Query: 396 DCLPNFVSYNTIICGL---CMAK-GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ + +T++ GL C + D +++ +++ SGH Y + + G
Sbjct: 385 GFEVDGRALDTLVRGLFRRCATDVSALGDAKEVFAKVVASGHEPVSYTYCLMAQALARGG 444
Query: 452 NVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
V+ + + +MV +KG L+ + + T VV AL
Sbjct: 445 EVDAAVALLEDMV-RKGYALRKRAY-TDVVRAL 475
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 136/284 (47%), Gaps = 12/284 (4%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG V A+ F + + + SYNSL+G L V ++ A + +++ K++ + PD+
Sbjct: 226 RGRVTKAMEVFDAMRALGCEPTIRSYNSLVGGLCYVGRLEEALDLLNKL-KDSPMTPDIY 284
Query: 196 TYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
T+T ++ G+CK+G E A +F M + P + YN ++NG CK+G +A + EM
Sbjct: 285 TFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTIFTYNALLNGHCKEGNPLKAFALLMEM 344
Query: 253 M--NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL---C 307
+ C P+++++ ++ L G A +M GF+ + ++++GL C
Sbjct: 345 CGNDAACPPDKISFGIVLTALLRAGETSAAWQTYKRMERAGFEVDGRALDTLVRGLFRRC 404
Query: 308 V--VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
V A V+ + P +Y ++ + G+ D A++LL++M +G
Sbjct: 405 ATDVSALGDAKEVFAKVVASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRKGYALR 464
Query: 366 VFSFNAVFRILVENGE-LDRAILLLKQMPQMDCLPNFVSYNTII 408
++ V R L + G LD +L+ M D +P ++ ++
Sbjct: 465 KRAYTDVVRALCDRGRALDALQVLVLVMIVRDFVPGRNAFEALL 508
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 127/279 (45%), Gaps = 13/279 (4%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKC 248
P V+T++ ++ CK G + A +VFD M +P + +YN+++ G C G LEEA
Sbjct: 211 PSVATFSAVVGCLCKRGRVTKAMEVFDAMRALGCEPTIRSYNSLVGGLCYVGRLEEALDL 270
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+N++ + P+ T+ ++ G C GR +EA + G + T+ ++L G C
Sbjct: 271 LNKLKDSPMTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTIFTYNALLNGHCK 330
Query: 309 VGKFDQAVGYLRNVM--EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
G +A L + +A PD S+ +V+ + G++ A K M G +
Sbjct: 331 EGNPLKAFALLMEMCGNDAACPPDKISFGIVLTALLRAGETSAAWQTYKRMERAGFEVDG 390
Query: 367 FSFNAVFRILVENGELDRAIL-----LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ + + R L D + L + ++ P VSY + +A+G D
Sbjct: 391 RALDTLVRGLFRRCATDVSALGDAKEVFAKVVASGHEP--VSYTYCLMAQALARGGEVDA 448
Query: 422 E-DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
L++ M+R G+ L Y+ +++ C+ G + +Q+
Sbjct: 449 AVALLEDMVRKGYALRKRAYTDVVRALCDRGRALDALQV 487
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
VS + +L L G AV R + A PD +S+ + C+ G DEA +
Sbjct: 145 TVSDYNDILSALARAGDHATAVALFRAMPVA---PDAQSFATAVQCLCRQGAPDEAKLAI 201
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
EM ARG +P+V +F+AV L + G + +A+ + M + C P SYN+++ GLC
Sbjct: 202 DEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVFDAMRALGCEPTIRSYNSLVGGLCYV 261
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
GR+++ DL++++ S D ++ +L G+C+ G E I H+ +
Sbjct: 262 -GRLEEALDLLNKLKDSPMTPDIYTFTIVLDGFCKVGRTEEATAIFHDAI 310
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 200/416 (48%), Gaps = 44/416 (10%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
I++ ++L++ + S F K I+A +V + F++ K ++ YN L+
Sbjct: 537 INVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDG 596
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKP 224
L +V +K AE+ F +++ ++P + TY T+I GYCK G E + KV + M ++P
Sbjct: 597 LCKVRQMKDAEQLFDEMLARRLLPSLI-TYNTLIDGYCKDGNPEKSFKVRERMKADNIEP 655
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+L+ +NT++ G K G +E+A+ + EM ++G P+ T++ + G N + D A +
Sbjct: 656 SLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVY 715
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV-----------------------GYLR- 320
+G K N T +L LC G+ ++A GY R
Sbjct: 716 ETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRK 775
Query: 321 ----------NVMEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+ ME M PD +Y +I FC++G + A + +M+ +G+ P+V ++
Sbjct: 776 GDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETY 835
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR-M 428
N + E D+ LLK+M +PN VSY T+I C+ KG +V R M
Sbjct: 836 NILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLIN--CLCKGSKLLEAQIVKRDM 893
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
G + + +Y+ L+ G C +G +E+ + + EM KKG L L + T ++D L
Sbjct: 894 EDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMF-KKGIELNLVTYNT-LIDGL 947
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 174/375 (46%), Gaps = 40/375 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y GN + + + K L ++N+LL L + ++ AE ++ +
Sbjct: 628 LIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQG 687
Query: 189 VVPPDVSTYTTMIRGY-----------------------------------CKMGMIENA 213
VP D T++ + GY CK G IE A
Sbjct: 688 FVP-DAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKA 746
Query: 214 KKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+++ K PN + YNTMI+G+ +KG+L A+ ++ M +G +P+ L YN +I
Sbjct: 747 EEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRT 806
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C G ++ A+ + KM+L G +V T+ ++ G +FD+ L+ + + P+
Sbjct: 807 FCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPN 866
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V SY +IN CK K EA + ++M RG+ P V +N + G+++ A +
Sbjct: 867 VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSE 926
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M + N V+YNT+I GL M G++ + ED++ + R G D Y+ L+ GY
Sbjct: 927 EMFKKGIELNLVTYNTLIDGLSM-NGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFA 985
Query: 451 GNVENVMQIAHEMVT 465
GNV+ + + EM T
Sbjct: 986 GNVQRCIALYEEMKT 1000
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 167/347 (48%), Gaps = 19/347 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I Y +G++ A ++ +YN L+ + ++ AE+ +++ K
Sbjct: 768 MIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKM-KLK 826
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT------VKPNLLAYNTMINGFCKKGEL 242
V P V TY +I GY G K FD++ PN+++Y T+IN CK +L
Sbjct: 827 GVSPSVETYNILIGGY---GRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKL 883
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA+ +M +RG PN YN +I G C G++++A +M G + N+ T+ ++
Sbjct: 884 LEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTL 943
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GL + GK +A L + + PDV +Y +I+G+ G I+L +EM+ G+
Sbjct: 944 IDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGI 1003
Query: 363 KPTVFSFNAVFRILVENG-ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA-KGRMQD 420
KPT+ +++ + + + G EL + I +M P+ + YN ++ C A G M
Sbjct: 1004 KPTLKTYHLLISLCTKEGIELTKKIF-----GEMSLQPDLLVYNGVLH--CYAVHGDMDK 1056
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+L +MI LD T Y+ L+ G + G + V + EM ++
Sbjct: 1057 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKARE 1103
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 155/306 (50%), Gaps = 5/306 (1%)
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-- 221
LL LV+ ++ F I++ + P Y I+ K+ + ++F+ M
Sbjct: 523 LLDHLVKTKQFRVTINVFLNILESDFRPSKF-MYGKAIQAAVKLSDVGKGLELFNRMKHD 581
Query: 222 -VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
+ P + YN +I+G CK ++++A++ +EM+ R P+ +TYN +I G C +G +++
Sbjct: 582 RISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKS 641
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+ +M+ + + ++ T ++LKGL G + A L + + PD ++ ++ +G
Sbjct: 642 FKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDG 701
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
+ K+D A+ + + GLK ++ + + L + G++++A +L + +PN
Sbjct: 702 YSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPN 761
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V YNT+I G KG + +D M + G D Y+CL++ +CE G++EN Q
Sbjct: 762 EVLYNTMIDGYS-RKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEV 820
Query: 461 HEMVTK 466
++M K
Sbjct: 821 NKMKLK 826
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 156/342 (45%), Gaps = 52/342 (15%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACL---YSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI YG + F K++E+ + SY +L+ L + + + A QIV
Sbjct: 838 LIGGYGRKYEFDKC---FDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA-----QIV 889
Query: 186 KENV----VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCK 238
K ++ V P+V Y +I G C G IE+A + + M ++ NL+ YNT+I+G
Sbjct: 890 KRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSM 949
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G+L EA+ + E+ +G +P+ TYN++I G G V L +M+ +G K + T
Sbjct: 950 NGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKT 1009
Query: 299 HKSMLKGLC--------------------------------VVGKFDQAVGYLRNVMEAN 326
+ +L LC V G D+A + ++E +
Sbjct: 1010 YH-LLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKS 1068
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ D +Y +I G K+GK E SL+ EM+AR ++P +++ + + E + A
Sbjct: 1069 IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAY 1128
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ ++M + L + + ++ GL + R ++ E+++ M
Sbjct: 1129 VWYREMQEKGLLLDVCIGDELVSGL-KEEWRSKEAENVISEM 1169
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 112/239 (46%), Gaps = 35/239 (14%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY------------- 204
L +YN+L+ L + AE+ +I ++ + PDV TY ++I GY
Sbjct: 937 LVTYNTLIDGLSMNGKLAEAEDMLLEISRKGL-KPDVFTYNSLISGYRFAGNVQRCIALY 995
Query: 205 ---------------------CKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELE 243
C IE KK+F M+++P+LL YN +++ + G+++
Sbjct: 996 EEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMD 1055
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A +M+ + ++ TYN++I G G++ E + L+ +M+ + T+ ++
Sbjct: 1056 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIV 1115
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
KG C + + A + R + E + DV + +++G + +S EA +++ EM R L
Sbjct: 1116 KGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRKL 1174
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 1/187 (0%)
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L +R G + + +L L +F + N++E++ P Y
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
I K+ + + L M+ + PTVF +N + L + ++ A L +M
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
LP+ ++YNT+I G C G + + +RM ++ LLKG + G VE+
Sbjct: 618 LLPSLITYNTLIDGYC-KDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDA 676
Query: 457 MQIAHEM 463
+ EM
Sbjct: 677 ENVLTEM 683
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 166/308 (53%), Gaps = 4/308 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
SY +++G L + IK +++K++ + PD TY T + K G + A +
Sbjct: 339 SYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLRE 398
Query: 218 -DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ + + + Y+ +++ FC++G +++AK+ +NEM ++GC P+ +TY ++I GLC +
Sbjct: 399 AEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERK 458
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+AK ++ +M +G K N ++ ++L GLC G +A + E P+ +Y V
Sbjct: 459 VDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSV 518
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++GF + GKS EA L++EM +G PT N + + L + ++D A ++Q
Sbjct: 519 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 578
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C N V++ T+I G C K ++ L+D M S + D Y+ ++ ++G +E
Sbjct: 579 CAVNVVNFTTVIHGFCQ-KDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEA 637
Query: 457 MQIAHEMV 464
++A +M+
Sbjct: 638 TKLAMKML 645
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 174/354 (49%), Gaps = 8/354 (2%)
Query: 110 IAASLLKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
+ +LK+SN L D + + G+ A+ + +A++ Y++++
Sbjct: 359 LMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSF 418
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPN 225
R + A+E +++ + +P DV TYT++I G C+ ++ AKK+ M KPN
Sbjct: 419 CREGRMDKAKEIVNEMFSKGCIP-DVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPN 477
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++Y ++NG CK G EA++ MN PN +TY+ +++G G+ EA L+
Sbjct: 478 TVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVR 537
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M GF +++ LC K D+A ++ + +V ++ VI+GFC+
Sbjct: 538 EMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKD 597
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ A+SLL +M P V ++ + L + G ++ A L +M ++ +P V+Y
Sbjct: 598 DLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYR 657
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
T+I C GR++D+ L+++M+ T Y+ +++ C GN+E ++
Sbjct: 658 TVIHQYCRM-GRVEDLLKLLEKMLSRQECR--TAYNQVIEKLCSFGNLEQAYKL 708
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 143/282 (50%), Gaps = 7/282 (2%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAK 246
+ PD+S T I ++ A + + M + +PN++ YN +I G+C LE+A
Sbjct: 263 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAM 322
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM--RLNGFKDNVSTHKSMLK 304
+ + EM +GC P++++Y ++ LC R+ E ++LM KM N D V T+ + +
Sbjct: 323 ELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQV-TYNTFVH 381
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
L G D+A+ +LR E D Y +++ FC+ G+ D+A ++ EM ++G P
Sbjct: 382 MLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIP 441
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
V ++ +V L + ++D+A +L+QM + C PN VSY ++ GLC G + ++
Sbjct: 442 DVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLC-KNGNSLEAREM 500
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ + YS L+ G+ EG + EM+ K
Sbjct: 501 MNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKK 542
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
A+ ++ + + G+L A + + M G P+ N I+ L + R+D+A + +M
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQA----------------------VGYL------ 319
++ + NV T+ ++KG C + + + A +G+L
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI 353
Query: 320 ---RNVME-----ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
R +ME +N+ PD +Y ++ K G DEA+ L+E R + ++A
Sbjct: 354 KEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA 413
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ G +D+A ++ +M C+P+ V+Y ++I GLC + ++ + ++ +M +
Sbjct: 414 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQER-KVDQAKKMLRQMYKH 472
Query: 432 GHNLDFTMYSCLLKGYCEEGN 452
G + Y+ LL G C+ GN
Sbjct: 473 GCKPNTVSYTALLNGLCKNGN 493
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 109/232 (46%), Gaps = 9/232 (3%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N L+ L + + A+ F Q + N +V +TT+I G+C+ +E A + D M
Sbjct: 552 NLLIQSLCQEEKVDEAKRFMEQCLN-NGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 610
Query: 222 VK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ P+++ Y T+I+ KKG +EEA K +M+ G P +TY +I+ C GRV+
Sbjct: 611 LSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVE 670
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+ L+ KM ++ + + +++ LC G +QA L V+ D + ++I
Sbjct: 671 DLLKLLEKML--SRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLI 728
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG---ELDRAIL 387
+ G + ++ M R L P + V + L+ G E D+ IL
Sbjct: 729 ESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLIL 780
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+++ V+ + + GK A+ +L M+ G++P + N +LV LD+A+ L++
Sbjct: 233 EAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLER 292
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M ++ PN ++YN +I G C R++D +L+ M G + D Y ++ C+E
Sbjct: 293 MQIVEIEPNVITYNCLIKGYCDLH-RLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEK 351
Query: 452 NVENVMQIAHEMV 464
++ V + +M+
Sbjct: 352 RIKEVRLLMEKML 364
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+ +I + + +++AA+ + +Y +++ L + I+ A + +++
Sbjct: 586 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKML 645
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNL-LAYNTMINGFCKKGELEE 244
+ ++P V TY T+I YC+MG +E+ K+ + M + AYN +I C G LE+
Sbjct: 646 RVGLIPTPV-TYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQ 704
Query: 245 AKKCMNEMMNRGCRPNELTYNAMI 268
A K + +++ + + T + +I
Sbjct: 705 AYKLLGKVLRTASKIDANTCHMLI 728
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 176/379 (46%), Gaps = 42/379 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
S ++K+ D G + A+ A + + G C + Y++++ L + + A + FH+
Sbjct: 178 STVLKSVCDDGRSQWALDILRMAVK-QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHE 236
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ ++ V PP+V TY ++I CK ++ A+ + M V+P+ + YNT+I+G+ G
Sbjct: 237 MTQQGV-PPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLG 295
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ ++A + EM +RG PN +T + + LC +GR++EA+ M G K N+ ++
Sbjct: 296 QWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYS 355
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++L G G ++ + P+ + +++NG+ K G EA+ + ++M+ R
Sbjct: 356 TLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKR 415
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM------- 413
GL P V ++ AV G +D A+ M PNF Y +I G C
Sbjct: 416 GLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKA 475
Query: 414 ---------------------------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+GR+ + + + D +IR+G D +++ L+ G
Sbjct: 476 EELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDG 535
Query: 447 YCEEGNVENVMQIAHEMVT 465
YC G + ++ MV+
Sbjct: 536 YCLIGKMSEAFRVHDAMVS 554
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 155/305 (50%), Gaps = 8/305 (2%)
Query: 113 SLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVR 170
S+L +KL+ S L+ Y G + F+ + +G + +N L+ +
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNL--MVRDGIVPNQHVFNILVNGYAK 398
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLL 227
++ A F + K + PDV TY +I +C+MG +++A F+ M V+PN
Sbjct: 399 CGMVREAMFIFEDMQKRGL-NPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFA 457
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
Y +I GFC G+L +A++ + E+ N+G P L++ ++I LC GRV EA+ + +
Sbjct: 458 VYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMI 517
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
G K +V+ S++ G C++GK +A ++ + PD+ +Y ++NG CK G+
Sbjct: 518 IRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRI 577
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
D+ + L +E+ +G+KPT F++ + L G A + ++M + +Y+ +
Sbjct: 578 DDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSIL 637
Query: 408 ICGLC 412
+ GLC
Sbjct: 638 LTGLC 642
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 158/317 (49%), Gaps = 9/317 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y+ L+ R + LA FF ++++ + DV ++++RG C + A V
Sbjct: 103 VYTYSILIDCCCRARRLDLAFAFFGCLLRQG-MKADVIVVSSLLRGLCDAKRTDEAVDVL 161
Query: 218 ----DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR--GCRPNELTYNAMIYGL 271
+ P+ ++Y+T++ C G + A + + + GC N + Y+ +++GL
Sbjct: 162 FHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGL 221
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
G+V EA L +M G NV T+ S++ LC D+A G LR ++ + PD
Sbjct: 222 FKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDN 281
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +I+G+ +G+ +A+ + KEM +RG+ P + + L ++G ++ A
Sbjct: 282 VTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDS 341
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M N +SY+T++ G A G + D+ +L + M+R G + +++ L+ GY + G
Sbjct: 342 MLAKGHKLNIISYSTLLHGYATA-GCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400
Query: 452 NVENVMQIAHEMVTKKG 468
V M I +M K+G
Sbjct: 401 MVREAMFIFEDM-QKRG 416
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 155/328 (47%), Gaps = 44/328 (13%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP------NLLAYNTMI 233
FH++ + VP D +Y+T+++ C G + A + M VK N++ Y+T++
Sbjct: 161 LFHRMPELGCVP-DAISYSTVLKSVCDDGRSQWALDILR-MAVKQGGGCPCNVVVYSTVV 218
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
+G K+G++ EA +EM +G PN +TYN++I+ LC VD+A+ ++ +M NG +
Sbjct: 219 HGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQ 278
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
+ T+ +++ G +G++ QAV + + + P+ + + CK G+ +EA
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREF 338
Query: 354 LKEMRARGLKPTVFSFNA-------------------------------VFRILVEN--- 379
M A+G K + S++ VF ILV
Sbjct: 339 FDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAK 398
Query: 380 -GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
G + A+ + + M + P+ ++Y +I C G M D D + MI G +F
Sbjct: 399 CGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRM-GSMDDAMDKFNHMIDKGVEPNFA 457
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+Y CL++G+C G++ ++ +E+ K
Sbjct: 458 VYQCLIQGFCTHGDLVKAEELVYEIRNK 485
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 186/374 (49%), Gaps = 8/374 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G V+ A+F F ++ + +Y +++ R+ S+ A + F+ ++ +
Sbjct: 392 LVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKG 451
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKK-VFDVMT--VKPNLLAYNTMINGFCKKGELEEA 245
V P+ + Y +I+G+C G + A++ V+++ + P +L++ ++IN CK+G + EA
Sbjct: 452 V-EPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEA 510
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
++ + ++ G + + + ++I G C+ G++ EA + M G + ++ T+ +++ G
Sbjct: 511 QRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNG 570
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G+ D + R ++ + P +Y ++++G G++ A + +EM G+ T
Sbjct: 571 CCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVT 630
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +++ + L N + AI + +++ M+ + V N +I + A+ R ++ E L
Sbjct: 631 IPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKAR-RREEAEGLF 689
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALL 485
+ G Y+ +++ +EG+VE + M+ K L +F+ +V LL
Sbjct: 690 ASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVML--KSGLSPTSHFINVIVRTLL 747
Query: 486 LMW-IVTGGSWISR 498
IV G ++ R
Sbjct: 748 EKGEIVKAGIYMCR 761
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 39/279 (13%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA-KM 282
P + Y+ +I+ C+ L+ A ++ +G + + + ++++ GLC R DEA +
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR-NVMEANMNP-DVKSYEVVING 340
L +M G + ++ ++LK +C G+ A+ LR V + P +V Y V++G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
K GK EA L EM +G+ P V ++N+V L + +D+A +L+QM P+
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280
Query: 401 FVSYNTIICG-----------------------------------LCMAKGRMQDVEDLV 425
V+YNT+I G LC GR+++ +
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLC-KHGRIEEAREFF 339
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
D M+ GH L+ YS LL GY G + ++ + + MV
Sbjct: 340 DSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMV 378
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P TY+ +I C R+D A + G K +V S+L+GLC + D+AV
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 319 LRNVM-EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM--RARGLKPTVFSFNAVFRI 375
L + M E PD SY V+ C G+S A+ +L+ + G V ++ V
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L + G++ A L +M Q PN V+YN++I LC A+ + + ++ +M+ +G
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARA-VDKAQGILRQMVGNGVQP 279
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ L+ GY G + +++ EM ++
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEMTSR 310
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 4/199 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y +L L A+E F +++ E+ + + TY+ ++ G C+ E A VF
Sbjct: 597 FTYGIILDGLFHAGRTAAAKEMFQEMI-ESGIAVTIPTYSILLTGLCRNNCTEEAITVFQ 655
Query: 219 ---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M VK +++ N MI+ K EEA+ + + G P TY M+ L G
Sbjct: 656 KLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEG 715
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
V+EA+ + + M +G +++ L G+ +A Y+ V ++ + +
Sbjct: 716 SVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTAS 775
Query: 336 VVINGFCKIGKSDEAISLL 354
++++ F GK E ++LL
Sbjct: 776 MLLSLFSCKGKHREHLNLL 794
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%)
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
PTV++++ + LD A + + + + ++++ GLC AK + V+
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
L RM G D YS +LK C++G + + I V + G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGG 205
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 204/498 (40%), Gaps = 108/498 (21%)
Query: 68 PYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN--SNKLSDFF 125
P AL FN + + HT + + LL H + A SL+ SNK+S F
Sbjct: 18 PLQALSLFNSSIQQG-----FQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPF 72
Query: 126 IS-----------------------KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS-- 160
+ +I A+ + A+ +F++ ++ G
Sbjct: 73 FTVPSLLHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNE--MVDKGLVFRPNI 130
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENV------------------------------- 189
+NSLLG LVR N + A FF+++ KE V
Sbjct: 131 FNSLLGSLVRSNCFEKAWLFFNEL-KERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQ 189
Query: 190 ---VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT------------------------- 221
+ P+V YTT+I G CK G IE A+ FD M
Sbjct: 190 DMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKK 249
Query: 222 -------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
+ PNL YN ++N +C +G++ A +EM RG N +TYN +I
Sbjct: 250 DGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLI 309
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
G+C RV EA+ L+ +M+ N+ T+ +++ G C VG D+A L + ++
Sbjct: 310 GGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLS 369
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P + +Y ++I G+ K G L +EM RG+ P+ + + V E+++A +
Sbjct: 370 PSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQI 429
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
M + +P+ Y +I GLCM KG M++ L M +Y+ ++ GYC
Sbjct: 430 YSSMEKFGLVPDVYVYGVLIHGLCM-KGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYC 488
Query: 449 EEGNVENVMQIAHEMVTK 466
+E N +++ EM K
Sbjct: 489 KEDNSYRALRLLREMEAK 506
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 147/282 (52%), Gaps = 4/282 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G + A F + ++ A + +YN+L+G + R + AE+ Q+ K+
Sbjct: 273 LMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQM-KKA 331
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V P++ TY T+I G+C +G ++ A + D + + P+L+ YN +I G+ K G +
Sbjct: 332 AVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGV 391
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
EM RG P+++T +I +++A + + M G +V + ++ G
Sbjct: 392 ADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHG 451
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC+ G ++ R++ E ++ P Y +I+G+CK S A+ LL+EM A+GL P
Sbjct: 452 LCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPN 511
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
V S++++ +L ++G+ + A +LL +M ++ P+ N I
Sbjct: 512 VASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 5/276 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+YN L+ I A + F ++ +E V +V TY T+I G C+ + A+K+
Sbjct: 267 LYTYNCLMNEYCGEGKICRAFDLFDEM-RERGVEANVVTYNTLIGGMCREERVWEAEKLV 325
Query: 218 DVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M V PNL+ YNT+I GFC G L++A ++++ + G P+ +TYN +I G
Sbjct: 326 DQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKA 385
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G L +M G + T ++ + + ++A ++ + + PDV Y
Sbjct: 386 GNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVY 445
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+I+G C G E+ L + M ++P+ +N + + RA+ LL++M
Sbjct: 446 GVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEA 505
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+PN SY++II LC G+ ++ E L+D+MI
Sbjct: 506 KGLVPNVASYSSIIGVLC-KDGKWEEAEVLLDKMIE 540
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 176/376 (46%), Gaps = 42/376 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ +I + G++ A +H+ ++ G + +YNS++ L + ++ A E +
Sbjct: 203 TTVINGFFKEGDLDKAYGTYHE--MLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSM 260
Query: 185 VKENVVP----------------------------------PDVSTYTTMIRGYCKMGMI 210
VK V+P PDV TY +++ CK G
Sbjct: 261 VKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC 320
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A+K+FD MT +KP + Y T++ G+ KG L E ++ M+ G PN ++ +
Sbjct: 321 TEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 380
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G+VD+A ++ +KMR G + T+ +++ LC G+ + A+ Y +++ +
Sbjct: 381 ICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+P Y +I+ C K D+A L+ EM RG+ FN++ + G + +
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L M ++ PN ++Y+T+I G C+A G+M + L+ M+ G D Y+ L+ GY
Sbjct: 501 LFDLMVRIGVKPNIITYSTLIDGYCLA-GKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 448 CEEGNVENVMQIAHEM 463
C+ +E+ + + EM
Sbjct: 560 CKISRMEDALVLFREM 575
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 180/382 (47%), Gaps = 42/382 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + L+K D + A+ Q + G C + SY +++ + + A
Sbjct: 163 FSYNILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGT 221
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+H+++ ++P +V TY ++I CK ++ A +V M V PN YN++++G+C
Sbjct: 222 YHEMLDRGILP-NVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G+ +EA + +M + G P+ +TYN+++ LC NGR EA+ + M G K ++
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++L+G G + G L ++ ++P+ + ++I + K GK D+A+ + +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM---- 413
R +GL P ++ V IL ++G ++ A+ +QM P + YN++I LC+
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 414 ------------------------------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+GR+ + E L D M+R G + YS L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTL 520
Query: 444 LKGYCEEGNVENVMQIAHEMVT 465
+ GYC G ++ ++ MV+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVS 542
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 148/281 (52%), Gaps = 6/281 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM-----TVKPNLLAYNTMINGFCKKGELEEAK 246
P+V +Y +++G C + A ++ +M P++++Y T+INGF K+G+L++A
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+EM++RG PN +TYN++I LC +D+A ++ M NG N T+ S++ G
Sbjct: 220 GTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+ +A+G+L+ + + PDV +Y +++ CK G+ EA + M RGLKP +
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++ + + G L LL M + PN ++ +IC +G++ +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA-KQGKVDQAMLVFS 398
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+M + G N D Y ++ C+ G VE+ M+ +M+ ++
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 182/372 (48%), Gaps = 8/372 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P Y Y ++ H L+ + +++N + + S LI AY +G V A
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPNHYVFSILICAYAKQGKVDQA 393
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + +Q +Y +++G+L + ++ A +F Q++ E + P ++ Y ++I
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI-VYNSLIH 452
Query: 203 GYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
C + AK++ M + + + +N++I+ CK+G + E++K + M+ G +P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N +TY+ +I G C+ G++DEA L+A M G K + T+ +++ G C + + + A+
Sbjct: 513 NIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
R + + ++PD+ +Y +++ G + ++ A L + G + + ++N + L +N
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
D A+ + + + D ++N +I G + GR + +DL + +G D
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMI-GALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 440 YSCLLKGYCEEG 451
YS + + E+G
Sbjct: 692 YSLMAENLIEQG 703
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 141/264 (53%), Gaps = 6/264 (2%)
Query: 150 KQIENGACLYS--YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ ++ G CL + +NS++ + + +E+ F +V+ V P++ TY+T+I GYC
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV-KPNIITYSTLIDGYCLA 527
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G ++ A K+ M +KP+ + YNT+ING+CK +E+A EM + G P+ +TY
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N ++ GL R AK L + +G + +ST+ +L GLC D+A+ +N+
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 647
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
++ + +++ ++I K+G++DEA L + A GL P V +++ + L+E G L+
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707
Query: 385 AILLLKQMPQMDCLPNFVSYNTII 408
L M + C N N+I+
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIV 731
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 165/366 (45%), Gaps = 55/366 (15%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRG 203
F + + GA +Y N L + R +S A ++++ + V P++ TY +I
Sbjct: 42 FDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100
Query: 204 YCKMGMIENA--------KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK-CMNEMMN 254
C G ++ KK F V + +A+ ++ G C +A + M
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRV-----DAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-----------------FKD--- 294
GC PN +YN ++ GLC R EA L+ M +G FK+
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 295 -----------------NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
NV T+ S++ LC D+A+ L ++++ + P+ ++Y +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++G+C G+ EAI LK+M + G++P V ++N++ L +NG A + M +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P +Y T++ G KG + ++ L+D M+R+G + + ++S L+ Y ++G V+ M
Sbjct: 336 KPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 458 QIAHEM 463
+ +M
Sbjct: 395 LVFSKM 400
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P++ +Y ++I C G+ D + L + +G + +F + + L + A+
Sbjct: 87 VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146
Query: 387 -LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL--DFTMYSCL 443
++L++M Q+ C+PN SYN ++ GLC + R Q+ +L+ M G + D Y+ +
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLC-DENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+ G+ +EG+++ HEM+ +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDR 228
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 4/214 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y ++ A+ F + + + +YN +L L + A+E + I E+
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT-ES 613
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
++STY ++ G CK + + A ++F + ++ +N MI K G +EA
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + G P+ TY+ M L G ++E L M NG N S+++
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
L G +A YL + E + + + + + ++
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ + + ++ A + ++K PD+ T+ T +R YC +G +E+ + D
Sbjct: 499 TYNIMIQFCCKASKMEEAIQLRDDMIKRGF-KPDLFTFNTFLRAYCNLGKVEDILHLLDQ 557
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KP+++ Y T+I+G+CK ++ +A K + E++ G RPN + YNA+I G NG
Sbjct: 558 MKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGS 617
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ +A ++ M+ NG + T+ S++ +C G ++A + N+ V Y +
Sbjct: 618 ISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTI 677
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I GFCKIGK DEA+ KEM R ++P ++ + + G + A L +M
Sbjct: 678 IIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSG 737
Query: 397 CLPNFVSYNTIICGLC 412
+P+ VSYNT+I G C
Sbjct: 738 IVPDTVSYNTLISGCC 753
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 156/309 (50%), Gaps = 10/309 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN L+G R A F ++V + + V TY + + CK G +E+A+++ D M
Sbjct: 324 YNQLIGWHCREGHCSEALRLFDEMVSKGI-KQTVVTYNLIAKALCKEGEMEHAEQILDEM 382
Query: 221 -----TVKPNLLAYNTMINGFCK-KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
TV +L +N+++ + G L+ + + EM+ R +PN+ A I LC
Sbjct: 383 LLAGMTVHCSL--FNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKR 440
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+ +EA + + G N++T +++ GLC +A L+ ++++ + D +Y
Sbjct: 441 GKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITY 500
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I CK K +EAI L +M RG KP +F+FN R G+++ + LL QM
Sbjct: 501 NIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKS 560
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ V+Y TII G C AK + + L++ +I++G + +Y+ L+ GY G++
Sbjct: 561 EGLKPDIVTYGTIIDGYCKAKDVHKANKYLIE-LIKNGLRPNAVIYNALIGGYGRNGSIS 619
Query: 455 NVMQIAHEM 463
+ + + M
Sbjct: 620 DAIGVLDTM 628
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 124/234 (52%), Gaps = 8/234 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQI--VKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
L+++N+ L + + E+ H + +K + PD+ TY T+I GYCK + A K
Sbjct: 532 LFTFNTFLRAYCNLGKV---EDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANK 588
Query: 216 VFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ ++PN + YN +I G+ + G + +A ++ M + G +P +TYN+++Y +C
Sbjct: 589 YLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMC 648
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G V+EAK + A+ L + V + +++G C +GK D+AV Y + + ++ P+
Sbjct: 649 HAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKM 708
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+Y ++ +CK G +EA L EM + G+ P S+N + E LD+ +
Sbjct: 709 TYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIV 762
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 145/287 (50%), Gaps = 7/287 (2%)
Query: 183 QIVKENV---VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGF 236
++++E V + P+ + T I+ CK G E A +++ ++ K N+ N +I+G
Sbjct: 413 RLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGL 472
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C+ ++EA K + M++ G + +TYN MI C +++EA L M GFK ++
Sbjct: 473 CQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDL 532
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T + L+ C +GK + + L + + PD+ +Y +I+G+CK +A L E
Sbjct: 533 FTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIE 592
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
+ GL+P +NA+ NG + AI +L M P ++YN+++ +C A G
Sbjct: 593 LIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHA-G 651
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+++ +++ + I L Y+ +++G+C+ G ++ + EM
Sbjct: 652 LVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 698
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 136/276 (49%), Gaps = 4/276 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
+++T +I G C+ ++ A KV M V+ + + YN MI CK ++EEA +
Sbjct: 461 NIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLR 520
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++M+ RG +P+ T+N + C G+V++ L+ +M+ G K ++ T+ +++ G C
Sbjct: 521 DDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKA 580
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+A YL +++ + P+ Y +I G+ + G +AI +L M+ G++PT ++
Sbjct: 581 KDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITY 640
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N++ + G ++ A + Q + + Y II G C G++ + M
Sbjct: 641 NSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKI-GKIDEAVMYFKEMH 699
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ Y+ L+ YC+ GN E ++ EMV+
Sbjct: 700 YRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVS 735
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 179/430 (41%), Gaps = 45/430 (10%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLKNSN--KLSDFFISKLIKAYGDRGNVKAAIFWFHQ 148
+ P + LL + +S+AA+ + +S+ +D + + + G++ A F +
Sbjct: 112 SLPSARRLISRLLFFNPLSVAAAAIADSDCTATADLLVRACLNSPAP-GSLSCAADAFLE 170
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
+ + N L+ L + LA + F ++ N V PDV TYT MI+ C+ G
Sbjct: 171 LSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAG 230
Query: 209 MIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA-------------------- 245
I+ A + + ++P ++ YN +++ C+ G +EEA
Sbjct: 231 EIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFG 290
Query: 246 ---------------KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+ EM G PNE+ YN +I C G EA L +M
Sbjct: 291 ILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSK 350
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK-IGKSDE 349
G K V T+ + K LC G+ + A L ++ A M + V+ + G+ D
Sbjct: 351 GIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDV 410
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
+ L++EM AR LKP A + L + G+ + A + + N + N +I
Sbjct: 411 VLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIH 470
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK--K 467
GLC M++ ++ M+ SG D Y+ +++ C+ +E +Q+ +M+ + K
Sbjct: 471 GLCQGN-NMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFK 529
Query: 468 GRLLKLKNFL 477
L FL
Sbjct: 530 PDLFTFNTFL 539
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 164/375 (43%), Gaps = 41/375 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IKA G + AA + ++ + +YN L+ L R ++ A + ++V E
Sbjct: 222 MIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV-EG 280
Query: 189 VVPPDVSTYTTMIRGYCK---MGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ P + T+ +I G + G ++ + + + PN + YN +I C++G EA
Sbjct: 281 RLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEA 340
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-------------- 291
+ +EM+++G + +TYN + LC G ++ A+ ++ +M L G
Sbjct: 341 LRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAW 400
Query: 292 ----------------------FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
K N + + ++ LC GK ++A V+ +
Sbjct: 401 HLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGV 460
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
++ + +I+G C+ EA +LK M G++ ++N + + + +++ AI L
Sbjct: 461 NIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLR 520
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
M + P+ ++NT + C G+++D+ L+D+M G D Y ++ GYC+
Sbjct: 521 DDMIKRGFKPDLFTFNTFLRAYCNL-GKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCK 579
Query: 450 EGNVENVMQIAHEMV 464
+V + E++
Sbjct: 580 AKDVHKANKYLIELI 594
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 119/255 (46%), Gaps = 4/255 (1%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
I + ++K K F + ++AY + G V+ + Q K + +Y +++
Sbjct: 517 IQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDG 576
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
+ + A ++ +++K N + P+ Y +I GY + G I +A V D M ++P
Sbjct: 577 YCKAKDVHKANKYLIELIK-NGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQP 635
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+ YN+++ C G +EEAK+ + + + + Y +I G C G++DEA M
Sbjct: 636 TPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYF 695
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M + N T+ +++ C G ++A ++ + + PD SY +I+G C++
Sbjct: 696 KEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEV 755
Query: 345 GKSDEAISLLKEMRA 359
D+ + EM +
Sbjct: 756 DSLDKIVESPAEMSS 770
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 13/311 (4%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN L+ +R + + L E + ++ PDV T +++ C G +E A++VFD M
Sbjct: 113 YNRLILAALRESRLDLVEALYKDLLLSGA-QPDVFTRNLLLQALCDAGRMELAQRVFDAM 171
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
+ N ++ + G+C+ G +A K ++ M + N + N ++ G C G V+EA
Sbjct: 172 PAR-NEFSFGILARGYCRAGRSIDALKVLDGMPSM----NLVVCNTVVAGFCKEGLVEEA 226
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN----PDVKSYEV 336
+ L+ +MR+ G NV T + + LC G+ A +++ E + PD +++V
Sbjct: 227 ERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDV 286
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++GFC G DEA L+ MR G V S+N LV NG + A LL++M
Sbjct: 287 MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEG 346
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG-HNLDFTMYSCLLKGYCEEGNVEN 455
PN +YN I+ GLC +G+ D V+ IRSG + D Y+ LL YC +GN+
Sbjct: 347 IQPNSYTYNIIVSGLC-KEGKAFDARR-VENFIRSGVMSPDVVTYTSLLHAYCSKGNIAA 404
Query: 456 VMQIAHEMVTK 466
+I EM K
Sbjct: 405 ANRILDEMAQK 415
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 172/367 (46%), Gaps = 48/367 (13%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++ N LL L ++LA+ F + N ++ + RGYC+ G +A KV
Sbjct: 145 VFTRNLLLQALCDAGRMELAQRVFDAMPARNEF-----SFGILARGYCRAGRSIDALKVL 199
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR- 276
D M NL+ NT++ GFCK+G +EEA++ + M +G PN +T+NA I LC GR
Sbjct: 200 DGMPSM-NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRV 258
Query: 277 --------------------------------------VDEAKMLMAKMRLNGFKDNVST 298
VDEA++L+ MR GF V +
Sbjct: 259 LDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVES 318
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ L GL G+ +A LR + + P+ +Y ++++G CK GK+ +A + +R
Sbjct: 319 YNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIR 378
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
+ + P V ++ ++ G + A +L +M Q C PN +YN ++ L A GR
Sbjct: 379 SGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRA-GRT 437
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK-KGRLLKLKN-F 476
+ E L++RM G++LD + ++ G C ++ M I M + G L +L N F
Sbjct: 438 TEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSF 497
Query: 477 LTRVVDA 483
L+ V D+
Sbjct: 498 LSVVSDS 504
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 140/315 (44%), Gaps = 62/315 (19%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN ++ L + A ++ V+ PDV TYT+++ YC G I A ++ D
Sbjct: 352 YTYNIIVSGLCKEGKAFDARRV-ENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILD 410
Query: 219 VMTVK---PNLLAYNTM-----------------------------------INGFCKKG 240
M K PN YN + I+G C+
Sbjct: 411 EMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNS 470
Query: 241 ELEEAKKCMNEMMNRG-----------------------CRPNELTYNAMIYGLCINGRV 277
L+ A ++ M G C P+++TY+ +I LC GR
Sbjct: 471 RLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRF 530
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
DEAK + +M + + + + + G C GK A+ LR++ + NP ++Y ++
Sbjct: 531 DEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLL 590
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I GF + KS+E + L+ EM+ +G+ P V ++N++ + + G +++A+ LL +M Q +
Sbjct: 591 IRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNEL 650
Query: 398 LPNFVSYNTIICGLC 412
+PN S++ +I C
Sbjct: 651 VPNITSFDLLIKAYC 665
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 181/437 (41%), Gaps = 63/437 (14%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLKN---SNKLSDFFISKLI-KAYGDRGNVKAA--IF 144
TTP Y + L S + + +L K+ S D F L+ +A D G ++ A +F
Sbjct: 109 TTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVF 168
Query: 145 WFHQAKQ------IENGAC-------------------LYSYNSLLGVLVRVNSIKLAEE 179
A+ + G C L N+++ + ++ AE
Sbjct: 169 DAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAER 228
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-------VKPNLLAYNTM 232
++ + + P +V T+ I CK G + +A ++F M +P+ + ++ M
Sbjct: 229 LVERMRVQGLAP-NVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVM 287
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
++GFC G ++EA+ ++ M G +YN + GL NGRV EA+ L+ +M G
Sbjct: 288 LSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGI 347
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
+ N T+ ++ GLC GK A + M+PDV +Y +++ +C G A
Sbjct: 348 QPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANR 407
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+L EM +G P F++N + + L G A LL++M + + N II GLC
Sbjct: 408 ILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLC 467
Query: 413 MAKGRMQDVEDLVDRMIRSGHNL-----------------------DFTMYSCLLKGYCE 449
R+ D+VD M G D YS L+ C+
Sbjct: 468 R-NSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCK 526
Query: 450 EGNVENVMQIAHEMVTK 466
EG + + EM+ K
Sbjct: 527 EGRFDEAKKKLLEMIVK 543
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 134/282 (47%), Gaps = 7/282 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
PD TY+ +I CK G + AKK M VK P+ + Y+T I+G+CK G+ A K
Sbjct: 512 PDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKV 571
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +M +GC P+ TYN +I G + +E LM++M+ G NV T+ S++K C
Sbjct: 572 LRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQ 631
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK-EMRARGLKPTVF 367
G ++A+ L +++ + P++ S++++I +CKI A + +R G K ++
Sbjct: 632 QGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLY 691
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
L G+ A +L+ +M Y II GLC G + L+
Sbjct: 692 CLMCTE--LTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEV-GEVDHAHSLLKL 748
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+I H D + ++ + G ++V ++ +M+ R
Sbjct: 749 LIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSAKMMEMADR 790
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 15/246 (6%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P YN +I ++ L+ + +++ G +P+ T N ++ LC GR++ A+ +
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRV 167
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M N + + +G C G+ A+ L + N+ V+ GFCK
Sbjct: 168 FDAMPAR----NEFSFGILARGYCRAGRSIDALKVLDGMPSMNL----VVCNTVVAGFCK 219
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC-----L 398
G +EA L++ MR +GL P V +FNA L + G + A + + M Q D
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDM-QEDWQHGLPR 278
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P+ V+++ ++ G C A G + + LVD M G Y+ L G G V +
Sbjct: 279 PDQVTFDVMLSGFCDA-GFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQE 337
Query: 459 IAHEMV 464
+ EM
Sbjct: 338 LLREMA 343
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 105 HSLISIAASLLKNSNKL----SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS 160
H S+A +L++ K S + LI+ + ++ + + + K+ + +
Sbjct: 562 HGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMT 621
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD-- 218
YNSL+ + + A ++++ +VP +++++ +I+ YCK+ +A+ VFD
Sbjct: 622 YNSLIKSFCQQGMVNKAMPLLDEMLQNELVP-NITSFDLLIKAYCKITDFPSAQMVFDAA 680
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ T + Y M G+ EAK + + Y +I GLC G VD
Sbjct: 681 LRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVD 740
Query: 279 EA----KMLMAKMRL 289
A K+L+AK L
Sbjct: 741 HAHSLLKLLIAKRHL 755
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 159/308 (51%), Gaps = 7/308 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+LL + + + E ++++NVV +V+TYT +I Y + IE A+K+FD
Sbjct: 225 TYNTLLNGYIEIKDVGGVNEILS-LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDE 283
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++P++ Y ++IN CK G ++ A +EM R PN TY A+I G C G
Sbjct: 284 MLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGE 343
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA-NMNPDVKSYE 335
+ A+M++ M+ G N +++ G C G D+A+ L+N+M+ D +
Sbjct: 344 MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEAL-RLQNIMQQKGFEIDAFTCN 402
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++ +GFC+ + +EA LL M RG+ P V SF+ + I + A L K M +
Sbjct: 403 IIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKK 462
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ V+YN I C KG+M++ L++ M G D Y+ L+ G GNV+
Sbjct: 463 GKAPSVVTYNAFIERYC-KKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDR 521
Query: 456 VMQIAHEM 463
+++ +EM
Sbjct: 522 ALELFNEM 529
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 156/318 (49%), Gaps = 18/318 (5%)
Query: 143 IFWFHQAKQIENGACL-------------YSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
I W+ ++ +IE L Y Y S++ + ++K A F ++ + +
Sbjct: 265 IEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRL 324
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAK 246
VP + TY +I G CK G ++ A+ + + M K N + +NT+++G+CKKG ++EA
Sbjct: 325 VP-NAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEAL 383
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ N M +G + T N + G C + R +EAK L+ M G NV + ++
Sbjct: 384 RLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIY 443
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C F +A + + + P V +Y I +CK GK +EA L+ EM+ RGL P
Sbjct: 444 CKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDT 503
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
+++ ++ +G +DRA+ L +MPQ+ N V+Y II GL GR + L D
Sbjct: 504 YTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLS-KDGRADEAFKLYD 562
Query: 427 RMIRSGHNLDFTMYSCLL 444
M + G D +YS L+
Sbjct: 563 EMNKEGIVPDDGIYSSLI 580
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 143/297 (48%), Gaps = 8/297 (2%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS- 195
GN+K A F + + Y+Y +L+ + +K AE + + + V DV+
Sbjct: 307 GNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGV---DVNR 363
Query: 196 -TYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNE 251
+ T++ GYCK GMI+ A ++ ++M K + N + +GFC+ EEAK+ +
Sbjct: 364 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLT 423
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M RG PN ++++ +I C EA+ L M G +V T+ + ++ C GK
Sbjct: 424 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 483
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
++A + + E + PD +Y +I+G G D A+ L EM GL V ++
Sbjct: 484 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 543
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ L ++G D A L +M + +P+ Y+++I L + +E++VDR+
Sbjct: 544 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRI 600
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 144/281 (51%), Gaps = 7/281 (2%)
Query: 191 PPDVSTYTTMI-RGYCKMGMIENAKKVFDVMTVKPNLLAYNTMIN---GFCKKGELEEAK 246
P V + M+ R Y M +++ +VFD K + + + G +E
Sbjct: 114 PSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCV 173
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+ + +M++ G ++ A++ GLC G V AK LM ++ GFK +V T+ ++L G
Sbjct: 174 EFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGY 233
Query: 307 CVVGKFDQAVGYLRNVMEAN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+ K V + ++ME N ++ +V +Y ++I + + K +EA L EM +G++P
Sbjct: 234 IEI-KDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPD 292
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V+ + ++ + G + RA +L +M + +PN +Y +I G C A G M+ E +V
Sbjct: 293 VYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA-GEMKAAEMMV 351
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M G +++ +++ L+ GYC++G ++ +++ + M K
Sbjct: 352 NDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQK 392
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
++ +++G CKKGE+ AK M+E++ +G +P+ +TYN ++ G V +++ M
Sbjct: 190 SWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLM 249
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
N NV+T+ +++ K ++A +++ + PDV Y +IN CK G
Sbjct: 250 EKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNM 309
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
A L EM R L P +++ A+ + GE+ A +++ M N V +NT+
Sbjct: 310 KRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTL 369
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G C KG + + L + M + G +D + + G+C E ++ M
Sbjct: 370 MDGYC-KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTM 424
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 267 MIYGLCINGRV-DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
M++ + ++ R+ D + + R GF+ + + L L G + V +LR ++++
Sbjct: 123 MLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDS 182
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
+ V S+ V++G CK G+ A +L+ E+ +G KP+V ++N + +E ++
Sbjct: 183 GIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGV 242
Query: 386 ILLLKQMPQMDCLPNFVSYN----TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+L M + N V YN T++ ++++ E L D M++ G D +Y+
Sbjct: 243 NEILSLMEK-----NVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 297
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKK 467
++ C+ GN++ + EM ++
Sbjct: 298 SIINWNCKFGNMKRAFVLFDEMTERR 323
>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
Length = 810
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 160/308 (51%), Gaps = 37/308 (12%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
DV TY T++ GYC+ G + +A+++ M PN +T++ G C E ++A++ ++EM
Sbjct: 170 DVVTYNTLVAGYCREGRLNDARRLVADMPFAPNSYTNSTLLKGLCSNKEWDDAEELLSEM 229
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR------------------------ 288
+ GC PN+LT+ +I+ LC NG D A ++ +M
Sbjct: 230 IRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRV 289
Query: 289 ---LNGF-----KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
L+ F K ++ ++ +++KGLC G+++ A + ++ + PD ++ VI+
Sbjct: 290 EEALHLFDQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISY 349
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
C G D A+ ++++M G KP F+++A+ L E G +D A+ LL+ +P PN
Sbjct: 350 LCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPWK---PN 406
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V Y +++ GLC A R DV LV MIR+ NLD + ++ C++G V+ ++
Sbjct: 407 TVCYRSVLKGLCRAD-RWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVL 465
Query: 461 HEMVTKKG 468
EM TK G
Sbjct: 466 REM-TKFG 472
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 185/436 (42%), Gaps = 78/436 (17%)
Query: 94 CYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIE 153
C+ + D + + + K K +F S L+ A +RG V A+
Sbjct: 351 CHRGLVDCAME-----VVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPWKP 405
Query: 154 NGACLYSYNSLLGVLVRV---------------NSIKLAE----------------EFFH 182
N C Y S+L L R N + L E ++
Sbjct: 406 NTVC---YRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGA 462
Query: 183 QIVKENV---VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKK 239
++++E PD+ Y ++I G+ + G +++A ++F M+ K N++ YN M+ G C+
Sbjct: 463 EVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKRNVVTYNYMLKGLCRA 522
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR----------- 288
+ E+A K + EM+ C PNE+T++ +I LC G V+ A + KM
Sbjct: 523 EQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIY 582
Query: 289 ---LNGFKD------------------NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+NG D + + + LKGLC +++ A + ++ N
Sbjct: 583 STLINGLSDQECVDDALKLLNDMPCKPDTICYSAALKGLCRAERWEDAGELILEMIRKNC 642
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD ++ ++IN C G + A + + M P VF ++++ E + A+
Sbjct: 643 LPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQ 702
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LL+ MP C P+ + Y+ + GLC AK R +D +L+ M R LD +S L+
Sbjct: 703 LLRNMP---CEPDTICYSAALKGLCRAK-RWEDARELIAEMFRKQCPLDEATFSMLIGSL 758
Query: 448 CEEGNVENVMQIAHEM 463
C+ G V+ ++ +M
Sbjct: 759 CQNGLVDMATEVFEQM 774
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 176/343 (51%), Gaps = 14/343 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+++I + G V+ A+ F Q + ++SYN+++ L R + A +V+
Sbjct: 277 NEIISCLAELGRVEEALHLFDQMPCKPD---IFSYNTVMKGLCRDGRWEDAGTLIAGMVR 333
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
++ PPD T+ T+I C G+++ A +V + M KP+ Y+ ++N ++G ++
Sbjct: 334 KDC-PPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVD 392
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + + + +PN + Y +++ GLC R D+ L+A+M N + T ++
Sbjct: 393 DALELLRTI---PWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLII 449
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
LC G D LR + + +PD+ Y +INGF + G D+A+ L K M K
Sbjct: 450 DCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCK 506
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
V ++N + + L + + A L+ +M + +CLPN V+++T+I LC KG ++ +
Sbjct: 507 RNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQ-KGFVECAIE 565
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ ++M + + +YS L+ G ++ V++ +++ ++M K
Sbjct: 566 VFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMPCK 608
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 155/340 (45%), Gaps = 43/340 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+++ L + A E Q+ K PD TY+ ++ + G +++A ++
Sbjct: 342 TFNTVISYLCHRGLVDCAMEVVEQMPKYGC-KPDNFTYSALVNALSERGCVDDALELLRT 400
Query: 220 MTVKPNLLAYNTMINGFCK-----------------------------------KGELEE 244
+ KPN + Y +++ G C+ KG ++
Sbjct: 401 IPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDY 460
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
+ + EM GC P+ + YN++I G NG VD+A L M K NV T+ MLK
Sbjct: 461 GAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLK 517
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
GLC +++ A + +++ P+ ++ +I+ C+ G + AI + ++M P
Sbjct: 518 GLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMP 577
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
V ++ + L + +D A+ LL MP C P+ + Y+ + GLC A+ R +D +L
Sbjct: 578 NVIIYSTLINGLSDQECVDDALKLLNDMP---CKPDTICYSAALKGLCRAE-RWEDAGEL 633
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ MIR D +S L+ C +G +E+ +++ M+
Sbjct: 634 ILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELML 673
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 167/356 (46%), Gaps = 48/356 (13%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLS---DFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
+ I D L L+ A +L+ K D I + LI + + G+V A+ F
Sbjct: 445 FGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMS 504
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
N + +YN +L L R + A + ++VK+ +P +V T++T+I C+ G +
Sbjct: 505 CKRN---VVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEV-TFSTLISYLCQKGFV 560
Query: 211 ENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
E A +VF+ M PN++ Y+T+ING + +++A K +N+M C+P+ + Y+A
Sbjct: 561 ECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM---PCKPDTICYSAA 617
Query: 268 IYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+ GLC R ++A L+ +M R N D V T ++ LC G + A +++
Sbjct: 618 LKGLCRAERWEDAGELILEMIRKNCLPDEV-TFSILINNLCHKGFLESATEVSELMLKYE 676
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEM-----------------------RARGLK 363
P+V Y +INGF + ++++A+ LL+ M AR L
Sbjct: 677 CMPNVFIYSSLINGFAEQYRAEDALQLLRNMPCEPDTICYSAALKGLCRAKRWEDARELI 736
Query: 364 PTVF---------SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
+F +F+ + L +NG +D A + +QM C PN +++++ G
Sbjct: 737 AEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNG 792
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 115/234 (49%), Gaps = 10/234 (4%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI D+ V A+ + + C Y++ L L R + A E ++++
Sbjct: 583 STLINGLSDQECVDDALKLLNDMPCKPDTIC---YSAALKGLCRAERWEDAGELILEMIR 639
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+N +P +V T++ +I C G +E+A +V ++M PN+ Y+++INGF ++ E
Sbjct: 640 KNCLPDEV-TFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAE 698
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+A + + N C P+ + Y+A + GLC R ++A+ L+A+M + +T ++
Sbjct: 699 DA---LQLLRNMPCEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLI 755
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
LC G D A + +P+ K + ++NG+ + + DE + LL M
Sbjct: 756 GSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 39/249 (15%)
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
E M RP + +I LC GR+D+A+ ++ G D V T +++ G C G
Sbjct: 92 ESMRDPERPAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTADAV-TRNTLVAGYCRAG 150
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK------------------------ 346
+ + + + DV +Y ++ G+C+ G+
Sbjct: 151 GRLADAERMLASLALSGSADVVTYNTLVAGYCREGRLNDARRLVADMPFAPNSYTNSTLL 210
Query: 347 --------SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
D+A LL EM G P +F + L +NG DRA+ +L QM + C
Sbjct: 211 KGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCT 270
Query: 399 PNFVSYNTIICGLCMAK-GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+ YN II C+A+ GR+++ L D+M D Y+ ++KG C +G E+
Sbjct: 271 RGVIVYNEIIS--CLAELGRVEEALHLFDQM---PCKPDIFSYNTVMKGLCRDGRWEDAG 325
Query: 458 QIAHEMVTK 466
+ MV K
Sbjct: 326 TLIAGMVRK 334
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 199/440 (45%), Gaps = 26/440 (5%)
Query: 6 RSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQ 65
R + + P LV I+ V+ + +PK+ L +S + SN+V +V+
Sbjct: 23 RIFSTLLHDPPSPDLVNEISRVLS----DHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRC 78
Query: 66 TN---PYHALFFFNWASN-PNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKL 121
N P H FF WA P+ + H+ Y + ++L S ++ L + +
Sbjct: 79 KNLGFPAHR--FFLWARRIPD-----FAHSLESYHILVEILGSSKQFALLWDFLIEAREY 131
Query: 122 SDFFISK-----LIKAYGDRGNVKA-AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK 175
+ F IS + +AY R N+ + A F++ + C+ + LL L +
Sbjct: 132 NYFEISSKVFWIVFRAYS-RANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVN 190
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTM 232
A+EFF + +VP TY+ ++RG+ ++ A+KVFD M + +LLAYN +
Sbjct: 191 HAQEFFGKAKGFGIVP-SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNAL 249
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
++ CK G+++ K EM N G +P+ ++ I+ C G V A ++ +M+
Sbjct: 250 LDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDL 309
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
NV T ++K LC K D A L +++ NPD +Y ++ C + + A
Sbjct: 310 VPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATK 369
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
LL M P ++N V ++L+ G DRA + + M + P +Y +I GL
Sbjct: 370 LLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLV 429
Query: 413 MAKGRMQDVEDLVDRMIRSG 432
KG++++ + MI G
Sbjct: 430 RKKGKLEEACRYFEMMIDEG 449
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 1/224 (0%)
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + N M+ G +P + +++ LC V+ A+ K + G + T+ ++
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+G + A ++E N D+ +Y +++ CK G D + +EM GLK
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +SF + G++ A +L +M + D +PN ++N II LC + ++ D
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNE-KVDDAYL 334
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
L+D MI+ G N D Y+ ++ +C+ V ++ M K
Sbjct: 335 LLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
I AY D G+V +A + K+ + +Y++N ++ L + + A +++++
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 189 VVP----------------------------------PDVSTYTTMIRGYCKMGMIENAK 214
P PD TY +++ ++G + A
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRAT 403
Query: 215 KVFDVMTVK---PNLLAYNTMINGFC-KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
++++ M+ + P + Y MI+G KKG+LEEA + M++ G P T +
Sbjct: 404 EIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNR 463
Query: 271 LCINGRVDEAKMLMAKM 287
L G++D +L KM
Sbjct: 464 LVGWGQMDVVDVLAGKM 480
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 177/343 (51%), Gaps = 9/343 (2%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQ 183
++ LIK +G + A F FH K + G L SY +L+ L +V + A + Q
Sbjct: 10 LNTLIKGLCLKGQIHQA-FLFHD-KLVALGFHLDQVSYGTLIHGLCKVGETRAALDLL-Q 66
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
V +V + Y T+I G CK + +A ++ M K PN++ Y+ +I+GF G
Sbjct: 67 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVG 126
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L++A N+++ +P+ T+N ++ G C + ++ E K + A M G +V T+
Sbjct: 127 KLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYN 186
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
S++ G +V + + A + + +NPD++SY ++INGFCKI K D+A++L EM +
Sbjct: 187 SLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCK 246
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+ P V ++N++ L ++G + A+ L+ QM PN ++YN+II L ++
Sbjct: 247 NIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDAL-FKTHQVDK 305
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L+ + G Y+ L+ G C+ G +++ I ++
Sbjct: 306 AIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 134/275 (48%), Gaps = 4/275 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
P+ T T+I+G C G I A D + + ++Y T+I+G CK GE A
Sbjct: 5 PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ + + + N + YN +IYG+C + V++A L ++M G NV T+ +++ G V
Sbjct: 65 LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
VGK A+ ++ N+ PD ++ ++++GFCK K E ++ M +G+ P V +
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 184
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N++ E++ A + M Q P+ SYN +I G C K ++ +L + M
Sbjct: 185 YNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIK-KVDKAMNLFNEM 243
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ Y+ L+ G + G + +Q+ +M
Sbjct: 244 HCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQM 278
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 124/244 (50%), Gaps = 1/244 (0%)
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M PN + NT+I G C KG++ +A ++++ G ++++Y +I+GLC G
Sbjct: 1 MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A L+ ++ + N + +++ G+C + A ++ ++P+V +Y +I+
Sbjct: 61 ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
GF +GK +AI L ++ +KP ++FN + ++ ++ + M + +P
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ V+YN+++ G + K + + + + M + G N D Y+ L+ G+C+ V+ M +
Sbjct: 181 DVVTYNSLVDGYRLVK-EVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNL 239
Query: 460 AHEM 463
+EM
Sbjct: 240 FNEM 243
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 167/310 (53%), Gaps = 9/310 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT--TMIRGYCKMGMIENAKKV 216
++Y+ L L R + F + +K+ V+ + YT ++ G CK G + AK+V
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVM---LGAYTCSILLNGLCKDGKVAKAKQV 356
Query: 217 FDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
F+++ + P + YNT+ING+C+ +L A +M +R RP+ +TYNA+I GLC
Sbjct: 357 FEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 416
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
V +A+ L+ +M +G +V T +++ G+ ++ L ++ + + DV S
Sbjct: 417 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
+ V+ FCK GK EA+++L +M + + P +N++ +E+G+ ++A+LL+++M
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMK 536
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ V+YN ++ GLC + ++ + E+L+ + G D Y+ ++ C +G+
Sbjct: 537 NSGVSASIVTYNLLLKGLCRSS-QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 595
Query: 454 ENVMQIAHEM 463
+ +++ EM
Sbjct: 596 DKALELLQEM 605
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 161/337 (47%), Gaps = 8/337 (2%)
Query: 134 GDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK-ENVVPP 192
G +V+AA A + +++N ++ V + +A ++ + E PP
Sbjct: 136 GRHADVRAAFGLLVAAGARPD---TFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPP 192
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D +Y +I G + G +A KVFD M V PN + YNTMI+G K G+LE +
Sbjct: 193 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLR 252
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++M++ G +PN +TYN ++ GLC GR+DE + LM +M + + T+ + GL
Sbjct: 253 DQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRT 312
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G+ + ++ + + +++NG CK GK +A + + + GL PT +
Sbjct: 313 GESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIY 372
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + + +L A + +QM P+ ++YN +I GLC + + EDLV M
Sbjct: 373 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE-MVTKAEDLVMEME 431
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+SG + ++ L+ Y G +E + +M K
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 468
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 176/375 (46%), Gaps = 5/375 (1%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN 154
+ +T S +++S+ A LK L + S L+ G V A F
Sbjct: 306 FDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGL 365
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
YN+L+ +V ++ A F Q+ K + PD TY +I G CK+ M+ A+
Sbjct: 366 VPTTVIYNTLINGYCQVRDLRGAFCIFEQM-KSRHIRPDHITYNALINGLCKLEMVTKAE 424
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
+ M V P++ +NT+I+ + G+LE+ +++M +G + + +++ +++
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 484
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C NG++ EA ++ M N + S++ G +QA+ + + + ++ +
Sbjct: 485 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASI 544
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y +++ G C+ + DEA L+ +R +GL+P V S+N + G+ D+A+ LL++
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + P + +T++ L A GR+ D+E L +M+ ++Y ++ Y
Sbjct: 605 MNKYGIRPTLRTCHTLVSALASA-GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCE 663
Query: 452 NVENVMQIAHEMVTK 466
N V + EM K
Sbjct: 664 NDSKVASLKKEMSEK 678
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 155/325 (47%), Gaps = 13/325 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y +++ A F Q K +YN+L+ L ++ + AE+ ++ K
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
V P V T+ T+I Y G +E V M +K +++++ +++ FCK G++ EA
Sbjct: 435 V-DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEA 493
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+++M+ + PN YN++I +G ++A +L+ KM+ +G ++ T+ +LKG
Sbjct: 494 VAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKG 553
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC + D+A + + + PDV SY +I+ C G +D+A+ LL+EM G++PT
Sbjct: 554 LCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPT 613
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII---------CGLCMAKG 416
+ + + + L G + L +QM + P+ Y ++ + K
Sbjct: 614 LRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKK 673
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYS 441
M + D RS H LD + S
Sbjct: 674 EMSEKGIAFDDTKRSNHELDRIIAS 698
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 176/400 (44%), Gaps = 43/400 (10%)
Query: 105 HSLISIAASLLKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSY 161
H+ + A LL + D F +K+++A G++ A+ + + E +SY
Sbjct: 138 HADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSY 197
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
N ++ L R A + F ++V V P + TY TMI G+ K G +E ++ D M
Sbjct: 198 NVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRI-TYNTMIDGHVKGGDLEAGFRLRDQML 256
Query: 221 --TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM----------- 267
KPN++ YN +++G C+ G ++E + M+EM + P+ TY+ +
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316
Query: 268 ------------------------IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+ GLC +G+V +AK + + G + +++
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLI 376
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C V A + ++ PD +Y +ING CK+ +A L+ EM G+
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 436
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P+V +FN + G+L++ +L M Q + +S+ +++ C G++ +
Sbjct: 437 PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC-KNGKIPEAVA 495
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++D MI + +Y+ ++ Y E G+ E + + +M
Sbjct: 496 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKM 535
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 102/254 (40%), Gaps = 35/254 (13%)
Query: 218 DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+V + P+L + N ++ G + + ++ G RP+ +N ++ G +
Sbjct: 114 EVCSPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDL 173
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A ++ +M + E PD SY VV
Sbjct: 174 DVALAMLRRMGRS---------------------------------EGAPPPDAFSYNVV 200
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I G + GK +A+ + EM G+ P ++N + V+ G+L+ L QM
Sbjct: 201 IAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP 260
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN V+YN ++ GLC GRM + L+D M D YS L G G + ++
Sbjct: 261 KPNVVTYNVLLSGLCRT-GRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTML 319
Query: 458 QIAHEMVTKKGRLL 471
+ E + KKG +L
Sbjct: 320 SLFAESL-KKGVML 332
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 164/344 (47%), Gaps = 38/344 (11%)
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+A + A S+N+L+ R S+ AE +V TYT +I GYC+
Sbjct: 143 EALKTSGAADAVSHNTLVAGYCRDGSLWDAERVLEAARASGAA--NVVTYTALIDGYCRS 200
Query: 208 GMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
G + +A ++ M V P+ YNT++ G C + EEA++ M EM+ C PNE+T+
Sbjct: 201 GRLTDALRLIASMPVAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQ 260
Query: 268 IYGLCINGRVDEAKMLMAKMR--------------LNGFKD------------------N 295
I C NG +D A L+ +M +NGF + N
Sbjct: 261 IRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPN 320
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
+ + LKGLC+ G++D+ + ++ + P+ ++ +IN C+ ++ AI +L+
Sbjct: 321 TVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLE 380
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
+M+ G P V S+N + E D A+ LL M C P+ +S+N ++ LC A+
Sbjct: 381 QMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAE 437
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
R D +L+ +M++ + + ++ L+ C+ G V++ +++
Sbjct: 438 -RWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEM 480
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 51/347 (14%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN++L L + AEE ++++ N P +V T+ T IR +C+ G+++ A ++ +
Sbjct: 220 YTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEV-TFATQIRAFCQNGLLDRAVELLE 278
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M P+++ Y+T++NGF + G +++A K ++ M+ CRPN + YNA + GLCI G
Sbjct: 279 QMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAG 335
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R DE L+A+M N +T +++ LC + A+ L + + PDV SY
Sbjct: 336 RWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYN 395
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV----------------------- 372
+I+ F + +D+A+ LL M KP SFNAV
Sbjct: 396 TIISCFSEQACADDALKLLNSMLC---KPDTISFNAVLKCLCRAERWYDAAELMAKMLKE 452
Query: 373 --------FRILV----ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
F IL+ +NG++ AI + + MP+ C P+ V+Y+++I G Q
Sbjct: 453 DCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGF-----SEQG 507
Query: 421 VEDLVDRMIRS-GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
++ + + RS D Y+ LKG C ++ ++ +MVTK
Sbjct: 508 LDKVAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTK 554
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 159/303 (52%), Gaps = 37/303 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ L + + A E Q+ K +P DV +Y T+I + + ++A K+ +
Sbjct: 358 TFSTLINSLCQNRLAEYAIEVLEQMQKYGYMP-DVVSYNTIISCFSEQACADDALKLLNS 416
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M KP+ +++N ++ C+ +A + M +M+ C NE+T+N +I LC NG+V +
Sbjct: 417 MLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKD 476
Query: 280 A-KM--LMAKMR-----------LNGFKD------------------NVSTHKSMLKGLC 307
A +M LM K R +NGF + ++ ++ + LKGLC
Sbjct: 477 AIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRADIFSYNATLKGLC 536
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
+ ++D A + +++ + P+ ++ ++IN C+ G + AI + ++M G+ P +F
Sbjct: 537 MAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIF 596
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++NA+ E G LD A+ L MP C P+ +SYN+I+ GLC A+ R +D E LV
Sbjct: 597 TYNALINGYSEQGCLDDALKFLSTMP---CEPDTISYNSILKGLCRAE-RWKDAEKLVTE 652
Query: 428 MIR 430
M+R
Sbjct: 653 MLR 655
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 180/385 (46%), Gaps = 18/385 (4%)
Query: 86 NKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK---LSDFFI-SKLIKAYGDRGNVKA 141
N H + + L+ A LL+ K + D I S L+ + + G V
Sbjct: 248 NNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDD 307
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ N C YN+ L L E ++V+++ PP+ +T++T+I
Sbjct: 308 ALKLLSTMLCRPNTVC---YNAALKGLCIAGRWDEVGELIAEMVRKDC-PPNDATFSTLI 363
Query: 202 RGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
C+ + E A +V + M P++++YNT+I+ F ++ ++A K +N M+ C+
Sbjct: 364 NSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CK 420
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P+ +++NA++ LC R +A LMAKM N T ++ LC G+ A+
Sbjct: 421 PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEM 480
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+ + PD+ +Y +INGF + G A L + M R +FS+NA + L
Sbjct: 481 FELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRA---DIFSYNATLKGLCM 537
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
D A L+ M DCLPN V++N +I LC KG + ++ ++M + G D
Sbjct: 538 AARWDDAGELIADMVTKDCLPNEVTFNILINSLCQ-KGLVNRAIEVYEQMPKYGITPDIF 596
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ L+ GY E+G +++ ++ M
Sbjct: 597 TYNALINGYSEQGCLDDALKFLSTM 621
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 124/243 (51%), Gaps = 9/243 (3%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P ++ N +I C + L +A++ + + G + +++N ++ G C +G + +A+ +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGA-ADAVSHNTLVAGYCRDGSLWDAERV 175
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ R +G NV T+ +++ G C G+ A LR + + PD +Y V+ G C
Sbjct: 176 LEAARASGAA-NVVTYTALIDGYCRSGRLTDA---LRLIASMPVAPDTYTYNTVLKGLCF 231
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
+ +EA L++EM P +F R +NG LDRA+ LL+QMP+ C+P+ V
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVI 291
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+T++ G GR+ D L+ M+ + + Y+ LKG C G + V ++ EM
Sbjct: 292 YSTLVNGF-SEHGRVDDALKLLSTMLCRPNTV---CYNAALKGLCIAGRWDEVGELIAEM 347
Query: 464 VTK 466
V K
Sbjct: 348 VRK 350
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 4/219 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ L + +K A E F + K P D+ TY+++I G+ + G+ + A +F
Sbjct: 460 TFNILIDSLCQNGQVKDAIEMFELMPKYRCTP-DIVTYSSLINGFSEQGLDKVAFDLFRS 518
Query: 220 MTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 279
M + ++ +YN + G C ++A + + +M+ + C PNE+T+N +I LC G V+
Sbjct: 519 MPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNR 578
Query: 280 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
A + +M G ++ T+ +++ G G D A+ +L + PD SY ++
Sbjct: 579 AIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTM---PCEPDTISYNSILK 635
Query: 340 GFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
G C+ + +A L+ EM + P +F ++ ++
Sbjct: 636 GLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 674
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 182/368 (49%), Gaps = 11/368 (2%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIEN-GACLY--SYNSL 164
I A ++ + L D F+S +I+ + K A+ K+ EN G L SYN+L
Sbjct: 716 IEFAENIASSGLLLDDLFLSPIIRHFCKH---KEALAAHELVKKFENLGVSLKTGSYNAL 772
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---T 221
+ LV + I +AEE F ++ K PD TY ++ K IE+ K+ + M
Sbjct: 773 ICGLVDEDLIDIAEELFSEM-KRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKG 831
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
K + YNT+I+G K L+EA ++M+ G P TY ++ GL +G +++A+
Sbjct: 832 YKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAE 891
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L +M G + N + + +L G + G ++ +++E MNPD+KSY VVI+
Sbjct: 892 ALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTL 951
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
C G+ ++ +S K++ GL+P + ++N + L ++G L+ A+ L M + PN
Sbjct: 952 CADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNL 1011
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
+YN++I L A G+ + + + ++ G + Y+ L++GY G+ EN
Sbjct: 1012 YTYNSLILYLGKA-GKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYG 1070
Query: 462 EMVTKKGR 469
M+ R
Sbjct: 1071 RMIVGGCR 1078
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 154/320 (48%), Gaps = 8/320 (2%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLKNSNKLS----DFFISKLIKAYGDRGNVKAAIFWFH 147
T Y A+ L+ LI IA L +L +F ++ A G ++ +
Sbjct: 766 TGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQE 825
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ + +YN+++ LV+ + A ++Q++ E P TY ++ G K
Sbjct: 826 EMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPC-TYGPLLDGLLKD 884
Query: 208 GMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G IE+A+ +FD M +PN YN ++NG+ G+ E+ + M+ +G P+ +Y
Sbjct: 885 GNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSY 944
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+I LC +GR+++ ++ G + ++ T+ ++ GL G+ ++A+ ++ +
Sbjct: 945 TVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEK 1004
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P++ +Y +I K GK+ EA + +E+ A+G KP VF++NA+ R +G +
Sbjct: 1005 KGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPEN 1064
Query: 385 AILLLKQMPQMDCLPNFVSY 404
A +M C PN +Y
Sbjct: 1065 AFAAYGRMIVGGCRPNSSTY 1084
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 142/290 (48%), Gaps = 9/290 (3%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G V A+ F + KQ YSYNSL+ ++ + A E F+ + N+ P +
Sbjct: 360 GRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHM---NIHGPTPNG 416
Query: 197 YTTM--IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNE 251
YT + I + K G A K +++M K P+++A N ++ G K G L AK+ +E
Sbjct: 417 YTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHE 476
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
+ G P+ +TY MI DEA + A+M N +V S++ L G+
Sbjct: 477 LKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGR 536
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
++A + E N+ P +Y ++ G + GK E + LL+ M + P + ++N
Sbjct: 537 GNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNT 596
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
V L +NGE++ A+ +L M C+P+ SYNT++ GL + +GR+ +
Sbjct: 597 VLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGL-VKEGRLDEA 645
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 187/452 (41%), Gaps = 64/452 (14%)
Query: 66 TNPYHAL-FFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDF 124
+P AL F + A P + HTT + +++ +H + A + D
Sbjct: 79 ADPEEALELFLSVARQP-----RVVHTTESCNYMLELMRAHGRVGDVAQVF-------DL 126
Query: 125 FISKLIKA-----------YGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
++IKA G G +++A K+ Y+YN L+ LV+
Sbjct: 127 MQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGF 186
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYN 230
+ A + + + + VVP V TY+ ++ + K E + M V+PN+ +Y
Sbjct: 187 DREAMDVYKAMAADGVVP-TVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYT 245
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL- 289
I + G LEEA + + +M GC+P+ +T +I LC GR+ +AK + KM+
Sbjct: 246 ICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKAS 305
Query: 290 ----------------------------------NGFKDNVSTHKSMLKGLCVVGKFDQA 315
+G+ DNV ++ + + LC VG+ D+A
Sbjct: 306 DQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEA 365
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ + + + P SY +I+GF K + + A+ L M G P ++
Sbjct: 366 LDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINY 425
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
++GE +A+ + M +P+ V+ N ++ GL GR+ + + + G +
Sbjct: 426 HGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLA-KTGRLGMAKRVFHELKAMGISP 484
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D Y+ ++K + N + M+I EM+ +
Sbjct: 485 DNITYTMMIKCCSKASNADEAMKIFAEMIENR 516
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 173/401 (43%), Gaps = 47/401 (11%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKL 129
AL FN + P PN Y H + H K+ L +L
Sbjct: 399 RALELFNHMNIHGPTPNGYTHVL--------FINYHG---------KSGESLKALKRYEL 441
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
+K+ G +V A N++L L + + +A+ FH++ K
Sbjct: 442 MKSKGIVPDVVAG-------------------NAVLYGLAKTGRLGMAKRVFHEL-KAMG 481
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+ PD TYT MI+ K + A K+F M P++LA N++I+ K G EA
Sbjct: 482 ISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAW 541
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
K E+ P + TYN ++ GL G+V E L+ M N F N+ T+ ++L L
Sbjct: 542 KIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCL 601
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+ + A+ L ++ PD+ SY V+ G K G+ DEA + +M+ + L P
Sbjct: 602 CKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDY 660
Query: 367 FSFNAVFRILVENGELDRAILLLKQ-MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ + V +G + A+ +++ + Q D + S ++++ G+ G + +E
Sbjct: 661 ATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIE-FA 719
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + SG LD S +++ +C+ AHE+V K
Sbjct: 720 ENIASSGLLLDDLFLSPIIRHFCKHKEA----LAAHELVKK 756
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 164/344 (47%), Gaps = 11/344 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+IK N A+ F A+ IEN + + NSL+ +L + A + F+++ +
Sbjct: 492 MIKCCSKASNADEAMKIF--AEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKE 549
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
N+ P D TY T++ G + G ++ ++ + M + PN++ YNT+++ CK GE+
Sbjct: 550 MNLEPTDC-TYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVN 608
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + M GC P+ +YN ++YGL GR+DEA + +M+ + +T ++L
Sbjct: 609 YALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDYATVCTIL 667
Query: 304 KGLCVVGKFDQAVGYLRN-VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
G +A+ +R +++ + D S ++ G K ++++I + + + GL
Sbjct: 668 PSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGL 727
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
+ + R ++ E A L+K+ + SYN +ICGL + + + E
Sbjct: 728 LLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGL-VDEDLIDIAE 786
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L M R G + D Y +L + +E++++I EM K
Sbjct: 787 ELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNK 830
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 148/313 (47%), Gaps = 8/313 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK----MGMIENAKK 215
S +SL+ +++ + + + EF I ++ D+ + +IR +CK + E KK
Sbjct: 698 SVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDL-FLSPIIRHFCKHKEALAAHELVKK 756
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
F+ + V +YN +I G + ++ A++ +EM GC P+E TY+ ++ + +
Sbjct: 757 -FENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSM 815
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R+++ + +M G+K T+ +++ GL D+A+ +M +P +Y
Sbjct: 816 RIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYG 875
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++G K G ++A +L EM G +P +N + G+ ++ L + M +
Sbjct: 876 PLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQ 935
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ SY +I LC A GR+ D ++ G D Y+ L+ G + G +E
Sbjct: 936 GMNPDIKSYTVVIDTLC-ADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEE 994
Query: 456 VMQIAHEMVTKKG 468
+ + ++M KKG
Sbjct: 995 ALSLYNDM-EKKG 1006
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 157/331 (47%), Gaps = 9/331 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L SYN+++ LV+ + A F Q+ K V+ PD +T T++ + + G+++ A
Sbjct: 626 LSSYNTVMYGLVKEGRLDEAFWMFCQMKK--VLAPDYATVCTILPSFVRSGLMKEALHTV 683
Query: 218 DVMTVKPN----LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
++P+ + ++++ G K+ E++ + + + G ++L + +I C
Sbjct: 684 REYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCK 743
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+ A L+ K G ++ +++ GL D A + +PD +
Sbjct: 744 HKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFT 803
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y ++++ K + ++ + + +EM +G K T ++N + LV++ LD AI L Q+
Sbjct: 804 YHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLM 863
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
P +Y ++ GL + G ++D E L D M+ G + +Y+ LL GY G+
Sbjct: 864 SEGFSPTPCTYGPLLDGL-LKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDT 922
Query: 454 ENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
E V ++ MV ++G +K++ T V+D L
Sbjct: 923 EKVCELFESMV-EQGMNPDIKSY-TVVIDTL 951
>gi|255661016|gb|ACU25677.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 367
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 153/287 (53%), Gaps = 5/287 (1%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKK 239
+++KE+ D TY ++ G+CK G + + V ++ K +L AY+ MING CK+
Sbjct: 83 ELMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLEIAERKGGVLDAFAYSAMINGLCKE 142
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+L++A +N M+ GC+PN YNA+I GL + ++A ++ +M F V T+
Sbjct: 143 AKLDKAVSVLNGMIKNGCKPNAHVYNALINGLVGASKFEDAIRVLREMGTXHFSPTVVTY 202
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ GLC +F +A ++ +++ +NP V +Y ++I G C K D+A+ L ++ +
Sbjct: 203 SXJINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSLLIKGLCLDRKVDKALQLWNQVIS 262
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G KP V N + L G++ A L L M + DC PN V++NT++ G G ++
Sbjct: 263 KGFKPDVQMHNIMIHGLCSVGKMQLA-LSLYYMNRWDCAPNLVTHNTLMEGF-YKDGDVR 320
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + R++R+G D Y+ LKG C + + + V+K
Sbjct: 321 NALVIWARILRNGLQPDIISYNITLKGLCSCNRISGAILFLQDAVSK 367
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 142/265 (53%), Gaps = 5/265 (1%)
Query: 205 CKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
C++G I+ A++V+ + V P+ + YN M+NG+ + G +++ + + E+M R +
Sbjct: 1 CEIGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVGRIKDCFE-LWELMGREGSRSV 59
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
++N M GL NG+VDE + M+ +G+ ++ T+ ++ G C G ++++ L
Sbjct: 60 SSFNIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLEI 119
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
D +Y +ING CK K D+A+S+L M G KP +NA+ LV +
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNAHVYNALINGLVGASK 179
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+ AI +L++M P V+Y+ JI GLC + R + DLV M+ G N YS
Sbjct: 180 FEDAIRVLREMGTXHFSPTVVTYSXJINGLCKGE-RFGEAYDLVKEMLDKGLNPSVITYS 238
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTK 466
L+KG C + V+ +Q+ +++++K
Sbjct: 239 LLIKGLCLDRKVDKALQLWNQVISK 263
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 119/236 (50%), Gaps = 5/236 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y++++ L + + A + ++K N P+ Y +I G E+A +V
Sbjct: 130 FAYSAMINGLCKEAKLDKAVSVLNGMIK-NGCKPNAHVYNALINGLVGASKFEDAIRVLR 188
Query: 219 VMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M P ++ Y+ +ING CK EA + EM+++G P+ +TY+ +I GLC++
Sbjct: 189 EMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSLLIKGLCLDR 248
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+VD+A L ++ GFK +V H M+ GLC VGK A+ L + + P++ ++
Sbjct: 249 KVDKALQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLALS-LYYMNRWDCAPNLVTHN 307
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
++ GF K G A+ + + GL+P + S+N + L + AIL L+
Sbjct: 308 TLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISGAILFLQD 363
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 107/220 (48%), Gaps = 7/220 (3%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+S+ ++KN K + + LI + AI + + +Y+ J+
Sbjct: 149 VSVLNGMIKNGCKPNAHVYNALINGLVGASKFEDAIRVLREMGTXHFSPTVVTYSXJING 208
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
L + A + +++ + + P V TY+ +I+G C ++ A ++++ + KP
Sbjct: 209 LCKGERFGEAYDLVKEMLDKGL-NPSVITYSLLIKGLCLDRKVDKALQLWNQVISKGFKP 267
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNR-GCRPNELTYNAMIYGLCINGRVDEAKML 283
++ +N MI+G C G+++ A MNR C PN +T+N ++ G +G V A ++
Sbjct: 268 DVQMHNIMIHGLCSVGKMQLALSLY--YMNRWDCAPNLVTHNTLMEGFYKDGDVRNALVI 325
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
A++ NG + ++ ++ LKGLC + A+ +L++ +
Sbjct: 326 WARILRNGLQPDIISYNITLKGLCSCNRISGAILFLQDAV 365
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 38/165 (23%)
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C +G D A + ++E+ ++PD Y ++NG+ ++G+ + L + M G + +V
Sbjct: 1 CEIGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVGRIKDCFELWELMGREGSR-SV 59
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
SFN + R L +NG++D I + + M +
Sbjct: 60 SSFNIMXRGLFBNGKVDEVISIWELMKE-------------------------------- 87
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLL 471
SG+ D Y L+ G+C+ G + + + E+ +KG +L
Sbjct: 88 ----SGYVEDSITYGILVHGFCKNGYLNKSIHVL-EIAERKGGVL 127
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 168/313 (53%), Gaps = 7/313 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN L+G L+ + I++A++ F Q VK PDV+TY ++ Y K G I+ +++
Sbjct: 787 LPTYNLLIGGLLEADMIEIAQDVFLQ-VKNTGCIPDVATYNFLLDAYGKSGKIDELFEIY 845
Query: 218 DVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMM-NRGCRPNELTYNAMIYGLCI 273
M+ +PN + +N +I+G K G +++A ++M +R P TY +I GL
Sbjct: 846 KEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK 905
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+GR+ EAK L M G + N + + ++ G G+ D A + +++ + PD+K+
Sbjct: 906 SGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKT 965
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y V+++ C +G+ DE + +E++ GL P V +N + L + L+ A++L +M
Sbjct: 966 YSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMK 1025
Query: 394 QMDCL-PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+ + P+ +YN++I L +A G +++ + + + R+G + ++ L++GY G
Sbjct: 1026 KSRGITPDLYTYNSLILNLGIA-GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1084
Query: 453 VENVMQIAHEMVT 465
E+ + MVT
Sbjct: 1085 PEHAYAVYQTMVT 1097
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 170/363 (46%), Gaps = 21/363 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L++YN+L+ L+RV+ + A E F + V P TY I Y K G +A + F
Sbjct: 400 LHTYNTLICGLLRVHRLDDALEIFDNMESLGV-KPTAYTYIVFIDYYGKSGDSVSALETF 458
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K PN++A N + K G EAK+ + + G P+ +TYN M+
Sbjct: 459 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 518
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +DEA L+++M N + +V S++ L + D+A + E + P V +Y
Sbjct: 519 GEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 578
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++ G K GK EAI L + M +G P +FN +F L +N E+ A+ +L +M
Sbjct: 579 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD 638
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
M C+P+ +YNTII GL + G++++ +M + + DF LL G + G +E
Sbjct: 639 MGCVPDVFTYNTIIFGL-VKNGQVKEAMCFFHQMKKLVYP-DFVTLCTLLPGVVKAGLIE 696
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRVVDALL-LMWIVTGGSWISRFVFVHQVVVIMERTV 513
+ +I + NFL D L W GS ++ + V ER V
Sbjct: 697 DAYKI-------------IANFLYSCADQPANLFWEDLMGSILAE-AGIDNAVSFSERLV 742
Query: 514 EDG 516
+G
Sbjct: 743 ANG 745
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 151/342 (44%), Gaps = 40/342 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +LL + +F+ ++ K+ VP DV T+T ++ CK G A DV
Sbjct: 332 TYITLLDRFSDNRDLDSVNQFWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFAKLDV 390
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY------------ 264
M + PNL YNT+I G + L++A + + M + G +P TY
Sbjct: 391 MRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGD 450
Query: 265 -----------------------NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
NA +Y L GR EAK + ++ G + T+
Sbjct: 451 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 510
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
M+K VG+ D+A+ L ++E PDV +IN K + DEA + M+
Sbjct: 511 MMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 570
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
LKPTV ++N + L +NG++ AI L + M Q C PN +++NT+ LC +
Sbjct: 571 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC-KNDEVTLA 629
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ +M+ G D Y+ ++ G + G V+ M H+M
Sbjct: 630 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 671
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 163/378 (43%), Gaps = 40/378 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ G R ++++ + + + + +Y++ + VL R I A E ++
Sbjct: 229 SSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 288
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELE 243
E PDV TYT +I C ++ AK+VF M KP+ + Y T+++ F +L+
Sbjct: 289 EGC-GPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLD 347
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+ +EM G P+ +T+ ++ LC G EA + MR G N+ T+ +++
Sbjct: 348 SVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLI 407
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
GL V + D A+ N+ + P +Y V I+ + K G S A+ ++M+ +G+
Sbjct: 408 CGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 467
Query: 364 PTVFSFNAVFRILVEN-----------------------------------GELDRAILL 388
P + + NA L + GE+D AI L
Sbjct: 468 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 527
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
L +M + C P+ + N++I L A R+ + + RM Y+ LL G
Sbjct: 528 LSEMVENCCEPDVIVVNSLINTLYKAD-RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 586
Query: 449 EEGNVENVMQIAHEMVTK 466
+ G ++ +++ MV K
Sbjct: 587 KNGKIQEAIELFEGMVQK 604
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 143/313 (45%), Gaps = 6/313 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+ L+G ++ I A F ++V + S +IR K A+ +F+
Sbjct: 718 WEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKF 777
Query: 221 T----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
T V+P L YN +I G + +E A+ ++ N GC P+ TYN ++ +G+
Sbjct: 778 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGK 837
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM-EANMNPDVKSYE 335
+DE + +M + + N TH ++ GL G D A+ ++M + + +P +Y
Sbjct: 838 IDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 897
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+G K G+ EA L + M G +P +N + + GE D A L K+M +
Sbjct: 898 PLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 957
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ +Y+ ++ LCM GR+ + + SG N D Y+ ++ G + +E
Sbjct: 958 GVRPDLKTYSVLVDCLCMV-GRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEE 1016
Query: 456 VMQIAHEMVTKKG 468
+ + +EM +G
Sbjct: 1017 ALVLFNEMKKSRG 1029
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 122/255 (47%), Gaps = 3/255 (1%)
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N M+ G++EE + M R + + TY + L + G + +A + KMR
Sbjct: 124 NYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMRE 183
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
GF N ++ ++ L +A+ R ++ P +++Y ++ G K +
Sbjct: 184 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIES 243
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
+ LLKEM GLKP V++F R+L G+++ A +LK+M C P+ V+Y +I
Sbjct: 244 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 303
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
LC A+ ++ +++ +M H D Y LL + + ++++V Q EM K G
Sbjct: 304 ALCTAR-KLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEM-EKDGH 361
Query: 470 LLKLKNFLTRVVDAL 484
+ + F T +VDAL
Sbjct: 362 VPDVVTF-TILVDAL 375
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 133/331 (40%), Gaps = 34/331 (10%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
+G ++ A F + ++ YSYN L+ +L++ A E + +++
Sbjct: 168 KGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI---------- 217
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
+ G+ +P+L Y++++ G K+ ++E + EM
Sbjct: 218 -----LDGF------------------RPSLQTYSSLMVGLGKRRDIESVMGLLKEMETL 254
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G +PN T+ I L G+++EA ++ +M G +V T+ ++ LC K D A
Sbjct: 255 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 314
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ PD +Y +++ F D EM G P V +F +
Sbjct: 315 KEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDA 374
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L + G A L M LPN +YNT+ICGL R+ D ++ D M G
Sbjct: 375 LCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVH-RLDDALEIFDNMESLGVKP 433
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y + Y + G+ + ++ +M TK
Sbjct: 434 TAYTYIVFIDYYGKSGDSVSALETFEKMKTK 464
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 12/205 (5%)
Query: 146 FHQAKQIENGACLYS-------YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
++AKQ+ G Y YN L+ + A F ++VKE V PD+ TY+
Sbjct: 909 LYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV-RPDLKTYS 967
Query: 199 TMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM-N 254
++ C +G ++ F + + P+++ YN +ING K LEEA NEM +
Sbjct: 968 VLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKS 1027
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
RG P+ TYN++I L I G V+EA + +++ G + NV T ++++G + GK +
Sbjct: 1028 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1087
Query: 315 AVGYLRNVMEANMNPDVKSYEVVIN 339
A + ++ +P+ +YE + N
Sbjct: 1088 AYAVYQTMVTGGFSPNTGTYEQLPN 1112
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 187/426 (43%), Gaps = 54/426 (12%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P+ Y+ CY+ + ++ I + + +++N + ++ LI V A
Sbjct: 503 PDSVTYNMMMKCYSKVGEI---DEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEA 559
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
F + K+++ + +YN+LL L + I+ A E F +V++ PP+ T+ T+
Sbjct: 560 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG-CPPNTITFNTLFD 618
Query: 203 GYCKMGMIENA-KKVFDVMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
CK + A K +F +M + P++ YNT+I G K G+++EA C M + P
Sbjct: 619 CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA-MCFFHQMKKLVYP 677
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLN---------------------GFKDNVS- 297
+ +T ++ G+ G +++A ++A + G + VS
Sbjct: 678 DFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSF 737
Query: 298 THKSMLKGLCVVG------------KFDQAVG----YLRNVMEANMNPDVKSYEVVINGF 341
+ + + G+C G K + A G + + + + P + +Y ++I G
Sbjct: 738 SERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGL 797
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
+ + A + +++ G P V ++N + ++G++D + K+M +C PN
Sbjct: 798 LEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNT 857
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC----LLKGYCEEGNVENVM 457
+++N +I GL A G + D DL ++ + DF+ +C L+ G + G +
Sbjct: 858 ITHNIVISGLVKA-GNVDDALDLYYDLM---SDRDFSPTACTYGPLIDGLSKSGRLYEAK 913
Query: 458 QIAHEM 463
Q+ M
Sbjct: 914 QLFEGM 919
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G V + +F + K+ + YN ++ L + + ++ A F+++ K + PD+ T
Sbjct: 977 GRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYT 1036
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y ++I GM+E A K+++ + ++PN+ +N +I G+ G+ E A M+
Sbjct: 1037 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1096
Query: 254 NRGCRPNELTYNAM 267
G PN TY +
Sbjct: 1097 TGGFSPNTGTYEQL 1110
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 181/382 (47%), Gaps = 42/382 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + L+K D + A+ Q + G C + SY +++ + + A
Sbjct: 163 FSYNILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGT 221
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+H+++ ++P +V TY+++I CK ++ A +V M V PN YN++++G+C
Sbjct: 222 YHEMLDRGILP-NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G+ +EA + +M + G P+ +TYN+++ LC NGR EA+ + M G K ++
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++L+G G + G L ++ ++P+ + ++I + K GK D+A+ + +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM---- 413
R +GL P ++ V IL ++G ++ A+ +QM P + YN++I LC+
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 414 ------------------------------AKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+GR+ + E L D M+R G D YS L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520
Query: 444 LKGYCEEGNVENVMQIAHEMVT 465
+ GYC G ++ ++ MV+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVS 542
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 156/307 (50%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS++ K A F ++ + V PDV TY +++ CK G A+K+FD
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT +KP + Y T++ G+ KG L E ++ M+ G PN ++ +I G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A ++ +KMR G + T+ +++ LC G+ + A+ Y +++ ++P Y
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ C K D+A L+ EM RG+ FN++ + G + + L M ++
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ ++Y+T+I G C+A G+M + L+ M+ G D Y+ L+ GYC+ +E+
Sbjct: 510 VKPDIITYSTLIDGYCLA-GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 457 MQIAHEM 463
+ + EM
Sbjct: 569 LVLFREM 575
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 148/281 (52%), Gaps = 6/281 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM-----TVKPNLLAYNTMINGFCKKGELEEAK 246
P+V +Y +++G C + A ++ +M P++++Y T+INGF K+G+L++A
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+EM++RG PN +TY+++I LC +D+A ++ M NG N T+ S++ G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+ +A+G+L+ + + PDV +Y +++ CK G+ EA + M RGLKP +
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++ + + G L LL M + PN ++ +IC +G++ +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA-KQGKVDQAMLVFS 398
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+M + G N D Y ++ C+ G VE+ M+ +M+ ++
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 182/372 (48%), Gaps = 8/372 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P Y Y ++ H L+ + +++N + + S LI AY +G V A
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPNHYVFSILICAYAKQGKVDQA 393
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + +Q +Y +++G+L + ++ A +F Q++ E + P ++ Y ++I
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI-VYNSLIH 452
Query: 203 GYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
C + AK++ M + + + +N++I+ CK+G + E++K + M+ G +P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TY+ +I G C+ G++DEA L+A M G K + T+ +++ G C + + + A+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
R + + ++PD+ +Y +++ G + ++ A L + G + + ++N + L +N
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
D A+ + + + D ++N +I G + GR + +DL + +G D
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMI-GALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 440 YSCLLKGYCEEG 451
YS + + E+G
Sbjct: 692 YSLMAENLIEQG 703
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 176/390 (45%), Gaps = 40/390 (10%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+ + S++KN + + ++ Y G K AI + + + +YNSL+
Sbjct: 254 MEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC---------------------- 205
L + A + F + K + P+++TY T+++GY
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGL-KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372
Query: 206 -------------KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
K G ++ A VF M + P+ + Y T+I CK G +E+A +
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M++ P + YN++I+ LCI + D+AK L+ +M G + S++ C
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G+ ++ ++ + PD+ +Y +I+G+C GK DEA LL M + G+KP ++
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + + ++ A++L ++M P+ ++YN I+ GL + R ++L +
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR-RTAAAKELYVGIT 611
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
SG L+ + Y+ +L G C+ + +++
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRM 641
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 141/264 (53%), Gaps = 6/264 (2%)
Query: 150 KQIENGACLYS--YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ ++ G CL + +NS++ + + +E+ F +V+ V PD+ TY+T+I GYC
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV-KPDIITYSTLIDGYCLA 527
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G ++ A K+ M +KP+ + YNT+ING+CK +E+A EM + G P+ +TY
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N ++ GL R AK L + +G + +ST+ +L GLC D+A+ +N+
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 647
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
++ + +++ ++I K+G++DEA L + A GL P V +++ + L+E G L+
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707
Query: 385 AILLLKQMPQMDCLPNFVSYNTII 408
L M + C N N+I+
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIV 731
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 165/366 (45%), Gaps = 55/366 (15%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRG 203
F + + GA +Y N L + R +S A ++++ + V P++ TY +I
Sbjct: 42 FDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100
Query: 204 YCKMGMIENA--------KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK-CMNEMMN 254
C G ++ KK F V + +A+ ++ G C +A + M
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRV-----DAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-----------------FKD--- 294
GC PN +YN ++ GLC R EA L+ M +G FK+
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 295 -----------------NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
NV T+ S++ LC D+A+ L ++++ + P+ ++Y +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++G+C G+ EAI LK+M + G++P V ++N++ L +NG A + M +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P +Y T++ G KG + ++ L+D M+R+G + + ++S L+ Y ++G V+ M
Sbjct: 336 KPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 458 QIAHEM 463
+ +M
Sbjct: 395 LVFSKM 400
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P++ +Y ++I C G+ D + L + +G + +F + + L + A+
Sbjct: 87 VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146
Query: 387 -LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL--DFTMYSCL 443
++L++M Q+ C+PN SYN ++ GLC + R Q+ +L+ M G + D Y+ +
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLC-DENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+ G+ +EG+++ HEM+ +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDR 228
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 4/214 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y ++ A+ F + + + +YN +L L + A+E + I E+
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT-ES 613
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
++STY ++ G CK + + A ++F + ++ +N MI K G +EA
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + G P+ TY+ M L G ++E L M NG N S+++
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
L G +A YL + E + + + + + ++
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 198/424 (46%), Gaps = 22/424 (5%)
Query: 58 VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL-- 115
V K++ + + ++ F+ A+ N Y H + + L+S + A L+
Sbjct: 19 VIKLMRAEKDVEKSMAVFDSATAEYAN--GYVHDQSSFGYMVLRLVSANKFKAAEDLIVR 76
Query: 116 ---KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+N D +S + + YG ++ FH+ K + +Y ++L +LV N
Sbjct: 77 MKIENCVVSEDILLS-ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEEN 135
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM-GMIENAKKVFDVMTVK---PNLLA 228
+ LA +F+ + +E +PP V++ +I+ C+ G ++ K+F M + P+
Sbjct: 136 QLNLAFKFYKNM-REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYT 194
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y T+I+G C+ G ++EAKK EM+ + C P +TY ++I GLC + VDEA + +M+
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK 254
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G + NV T+ S++ GLC G+ QA+ +M P++ +Y +I G CK K
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY---- 404
EA+ LL M +GLKP + V + A L +M PN +++
Sbjct: 315 EAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHV 374
Query: 405 ---NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
N ++ GLC L M G +++ L+K C++G + +Q+
Sbjct: 375 KTSNEVVRGLC--ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVD 432
Query: 462 EMVT 465
E+VT
Sbjct: 433 EIVT 436
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 186/375 (49%), Gaps = 29/375 (7%)
Query: 49 FSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLI 108
S+C G V + P+ +L F+ + + +P++ Y + +L+ + +
Sbjct: 90 LSICRGYGRVHR-------PFDSLRVFHKMKDFDCDPSQ-----KAYVTVLAILVEENQL 137
Query: 109 SIAASLLKNSNKL----SDFFISKLIKAY-GDRGNVKAAIFWFHQAKQIENGACLYSYNS 163
++A KN ++ + ++ LIKA + G V A + F + + Y+Y +
Sbjct: 138 NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGT 197
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-- 221
L+ L R I A++ F ++V+++ P V TYT++I G C ++ A + + M
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPT-VVTYTSLINGLCGSKNVDEAMRYLEEMKSK 256
Query: 222 -VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
++PN+ Y+++++G CK G +A + MM RGCRPN +TY +I GLC ++ EA
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD-------VKS 333
L+ +M L G K + + ++ G C + KF +A +L ++ + P+ VK+
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKT 376
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
V+ G C S A +L MR+RG+ V + ++ + L + GE +A+ L+ ++
Sbjct: 377 SNEVVRGLCANYPS-RAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIV 435
Query: 394 QMDCLPNFVSYNTII 408
C+P+ ++ +I
Sbjct: 436 TDGCIPSKGTWKLLI 450
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 10/212 (4%)
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV-VGKFDQAVGY 318
++ ++ M+ L + A+ L+ +M++ +N + +L +C G+ +
Sbjct: 50 DQSSFGYMVLRLVSANKFKAAEDLIVRMKI----ENCVVSEDILLSICRGYGRVHRPFDS 105
Query: 319 LR---NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
LR + + + +P K+Y V+ + + + A K MR GL PTV S N + +
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 376 LVEN-GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L N G +D + + +MP+ C P+ +Y T+I GLC GR+ + + L M+
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRF-GRIDEAKKLFTEMVEKDCA 224
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+ G C NV+ M+ EM +K
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSK 256
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%)
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
NG+ + S+ M+ L KF A + + N + G+ ++ + +
Sbjct: 45 NGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFD 104
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
++ + +M+ P+ ++ V ILVE +L+ A K M ++ P S N +I
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC G + + M + G + D Y L+ G C G ++ ++ EMV K
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 155/311 (49%), Gaps = 23/311 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ + + + A + ++K PD+ T+ + YC +G +E + D
Sbjct: 494 TYNIMIQGCCKASKMDEAIQLRDDMIKRGF-KPDLFTFNIFLHTYCNLGKVEEILHLLDQ 552
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KP+++ Y T+I+G+CK ++ +A + + E+M G RPN + YNA+I G NG
Sbjct: 553 MKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGN 612
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ +A ++ M+ NG + T+ S++ +C G ++ + ++ V Y +
Sbjct: 613 ISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTI 672
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I GFCKIGK DEA+ KEM +RG+ P ++ + ++G + A L +M +
Sbjct: 673 IIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLG 732
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL-------DFTMYSCLLKG--- 446
+P+ VSYNT+I G C D +D+M+ S + D Y+ + G
Sbjct: 733 IVPDSVSYNTLISGFCEV--------DSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITT 784
Query: 447 -YCEEGNVENV 456
+C++ V N
Sbjct: 785 PWCQKEAVSNA 795
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 156/312 (50%), Gaps = 16/312 (5%)
Query: 161 YNSLLGVLVR----VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
YN ++G R ++KL +E + +K+ VV TY + + CK G +E+A+K+
Sbjct: 319 YNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVV-----TYNLIAKALCKEGEMEHAEKI 373
Query: 217 FDVMTVKPNLLAYNTMINGFCK-----KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
D M + ++ + ++ N G L+ + + EM+ R +PN+ A I L
Sbjct: 374 LDEMLLA-GMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQEL 432
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +G+ +EA + ++ G NV+T +++ GLC +A L+ ++ + + D
Sbjct: 433 CKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDR 492
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+Y ++I G CK K DEAI L +M RG KP +F+FN G+++ + LL Q
Sbjct: 493 ITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQ 552
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M P+ V+Y TII G C AK M + + ++++G + +Y+ L+ GY G
Sbjct: 553 MKSEGLKPDIVTYGTIIDGYCKAK-DMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNG 611
Query: 452 NVENVMQIAHEM 463
N+ + + I M
Sbjct: 612 NISDAIGILDTM 623
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 147/296 (49%), Gaps = 9/296 (3%)
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV-FDVMT--VKPNLLAYN 230
++L E + +K P+ + T I+ CK G E A ++ F V+ + N+ N
Sbjct: 407 LRLIREMLARFLK-----PNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSN 461
Query: 231 TMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+I+G C+ ++EA K + M+N G + +TYN MI G C ++DEA L M
Sbjct: 462 ALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKR 521
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
GFK ++ T L C +GK ++ + L + + PD+ +Y +I+G+CK +A
Sbjct: 522 GFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKA 581
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
L E+ GL+P +NA+ NG + AI +L M P V+YN+++
Sbjct: 582 NEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYW 641
Query: 411 LCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+C A G +++V+ + + I L Y+ +++G+C+ G ++ + EM ++
Sbjct: 642 MCHA-GLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSR 696
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 161/328 (49%), Gaps = 40/328 (12%)
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMI 233
A E + Q++ + + +V+T +I G C+ ++ A KV M V+ + + YN MI
Sbjct: 441 AAEIWFQVLGKGL-GVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMI 499
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
G CK +++EA + ++M+ RG +P+ T+N ++ C G+V+E L+ +M+ G K
Sbjct: 500 QGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLK 559
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
++ T+ +++ G C +A YL +M+ + P+ Y +I G+ + G +AI +
Sbjct: 560 PDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGI 619
Query: 354 LKEMRARGLKPTVFSFNAV-------------------------------FRILVEN--- 379
L M+ G++PT ++N++ + I+++
Sbjct: 620 LDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCK 679
Query: 380 -GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
G++D A++ K+M PN ++Y T++ + G ++ L D M+ G D
Sbjct: 680 IGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKS-GNKEEASKLFDEMVSLGIVPDSV 738
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+ G+CE +++ +++ EM ++
Sbjct: 739 SYNTLISGFCEVDSLDKMVESPAEMSSQ 766
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 179/417 (42%), Gaps = 43/417 (10%)
Query: 91 TTPCYTAITDVLLSHSLISIAASLLKNSN--KLSDFFISKLIKAYGDRGNVKAAIFWFHQ 148
+ P + LL + +S+AA+ + +S+ +D + + + G++ A F +
Sbjct: 107 SLPSARRLVSRLLRFNPLSVAAAAIADSHCTATADLLVRACLNSPAP-GSLSRAADAFLE 165
Query: 149 AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG 208
+ + + L+ L + +A + F ++ V PDV TYT MI+ C+ G
Sbjct: 166 LSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAG 225
Query: 209 MIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKK------------------ 247
I+ A + + ++P ++ YN +++ CK G +EEA +
Sbjct: 226 EIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFG 285
Query: 248 -----------------CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+ EM G PNE+ YN MI C G EA L +M
Sbjct: 286 ILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSK 345
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK-IGKSDE 349
G K V T+ + K LC G+ + A L ++ A M + V+ + G+ D
Sbjct: 346 GIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDL 405
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
+ L++EM AR LKP A + L ++G+ + A + Q+ N + N +I
Sbjct: 406 VLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIH 465
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GLC M++ ++ M+ SG LD Y+ +++G C+ ++ +Q+ +M+ +
Sbjct: 466 GLCQGN-NMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKR 521
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 8/259 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQI--VKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
L+++N L + + EE H + +K + PD+ TY T+I GYCK + A +
Sbjct: 527 LFTFNIFLHTYCNLGKV---EEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANE 583
Query: 216 VFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ ++PN + YN +I G+ + G + +A ++ M G +P +TYN+++Y +C
Sbjct: 584 YLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMC 643
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
G V+E K + A+ + + V + +++G C +GK D+AV Y + + + P+
Sbjct: 644 HAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKM 703
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y ++ + K G +EA L EM + G+ P S+N + E LD+ + +M
Sbjct: 704 TYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEM 763
Query: 393 PQMDCLPNFVSYNTIICGL 411
+ SYN + G+
Sbjct: 764 SSQVLKQDGCSYNAFVDGI 782
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 181/403 (44%), Gaps = 38/403 (9%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLI--KAYGDRGNVKAA------I 143
P + LL H L AS +++ L +S L+ DR ++ +A +
Sbjct: 59 APLPASSAQRLLQHILSDAHASASRHAEDLLSPRVSTLLLQSLVADRASLPSARRLVSRL 118
Query: 144 FWFH----QAKQIENGACLYSYNSLLGVLVRV-------NSIKLAEEFFHQIVKENVVPP 192
F+ A I + C + + +LVR S+ A + F ++ P
Sbjct: 119 LRFNPLSVAAAAIADSHCTATAD----LLVRACLNSPAPGSLSRAADAFLELSARGA-SP 173
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVF----DVMTVKPNLLAYNTMINGFCKKGELEEAKKC 248
+ T + ++ G ++ A+KVF D TV P++ Y MI C+ GE++ A
Sbjct: 174 SIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAM 233
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ E+ G +P +TYN ++ LC +GRV+EA L +M + ++ T ++ GL
Sbjct: 234 LAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLAR 293
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
+F + L+ + + P+ Y +I C+ G EA+ L EM ++G+K TV +
Sbjct: 294 GQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVT 353
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + + L + GE++ A +L +M + + +N+++ GR+ DLV R+
Sbjct: 354 YNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRL----DLVLRL 409
Query: 429 IRSGHNL-----DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
IR D M +C ++ C+ G E +I +++ K
Sbjct: 410 IREMLARFLKPNDALMTAC-IQELCKSGKHEEAAEIWFQVLGK 451
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 162/381 (42%), Gaps = 49/381 (12%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +IKA G + AA + ++ + +YN L+ L + ++ A ++V
Sbjct: 215 TAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV- 273
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
E V P + T+ +I G + V M + PN + YN MI C+KG
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM- 302
EA K +EM+++G + +TYN + LC G ++ A+ ++ +M L G + S S+
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393
Query: 303 ---LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
L+G G+ D + +R ++ + P+ I CK GK +EA + ++
Sbjct: 394 AWHLRG---TGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLG 450
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK---- 415
+GL V + NA+ L + + A +LK M + ++YN +I G C A
Sbjct: 451 KGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDE 510
Query: 416 ------------------------------GRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
G+++++ L+D+M G D Y ++
Sbjct: 511 AIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIID 570
Query: 446 GYCEEGNVENVMQIAHEMVTK 466
GYC+ + M A+E +T+
Sbjct: 571 GYCKAKD----MHKANEYLTE 587
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
L+KN + + + LI YG GN+ AI K +YNSL+ +
Sbjct: 588 LMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGL 647
Query: 174 IKLAEEFFHQ-IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAY 229
++ + F Q IVK+ + V YT +I+G+CK+G I+ A F M + PN + Y
Sbjct: 648 VEEVKAVFAQCIVKD--IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTY 705
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
T++ + K G EEA K +EM++ G P+ ++YN +I G C +D+ A+M
Sbjct: 706 TTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSS 765
Query: 290 NGFKDNVSTHKSMLKGL 306
K + ++ + + G+
Sbjct: 766 QVLKQDGCSYNAFVDGI 782
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 181/382 (47%), Gaps = 42/382 (10%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + L+ D + A+ H + G C + SY++++ + +
Sbjct: 52 FSYNILLNGLCDENRSQEALELLHIMAD-DGGDCPPDVVSYSTVINGFFKEGDLDKTYST 110
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+++++ + + P+V TY ++I CK ++ A +V M V P+ + YN++++GFC
Sbjct: 111 YNEMLDQRI-SPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 169
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G+ +EA + +M + G P+ +TYN+++ LC NGR EA+ + M G K ++
Sbjct: 170 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEIT 229
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++L+G G + G L ++ ++P+ + +++ + K K +EA+ + +M
Sbjct: 230 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 289
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA--- 414
R +GL P ++ AV IL ++G ++ A+L +QM P + YN++I GLC
Sbjct: 290 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 349
Query: 415 -------------------------------KGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
+GR+ + E L D M+R G D YS L
Sbjct: 350 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 409
Query: 444 LKGYCEEGNVENVMQIAHEMVT 465
+ GYC G ++ ++ MV+
Sbjct: 410 IDGYCLAGKMDEATKLLASMVS 431
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 156/307 (50%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS++ K A F ++ + + V PDV TY +++ CK G A+K+FD
Sbjct: 160 TYNSIVHGFCSSGQPKEAIVFLKKM-RSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDS 218
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT +KP + Y T++ G+ KG L E ++ M+ G PN ++ ++ +
Sbjct: 219 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 278
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+EA ++ +KMR G N T+ +++ LC G+ + A+ Y +++ ++P Y
Sbjct: 279 VEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 338
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C K + A L+ EM RG+ FN++ + G + + L M ++
Sbjct: 339 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 398
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ ++Y+T+I G C+A G+M + L+ M+ G D YS L+ GYC+ +++
Sbjct: 399 VKPDIITYSTLIDGYCLA-GKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDA 457
Query: 457 MQIAHEM 463
+ + EM
Sbjct: 458 LVLFREM 464
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 164/313 (52%), Gaps = 5/313 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKV 216
++SYN LL L N + A E H + + PPDV +Y+T+I G+ K G ++
Sbjct: 51 VFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYST 110
Query: 217 FDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
++ M + PN++ YN++I CK +++A + + M+ G P+ +TYN++++G C
Sbjct: 111 YNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 170
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+G+ EA + + KMR +G + +V T+ S++ LC G+ +A ++ + + P++ +
Sbjct: 171 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITT 230
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y ++ G+ G E LL M G+ P + F+ + + +++ A+L+ +M
Sbjct: 231 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 290
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
Q PN V+Y +I LC + GR++D ++MI G + +Y+ L+ G C
Sbjct: 291 QQGLNPNAVTYGAVIGILCKS-GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 349
Query: 454 ENVMQIAHEMVTK 466
E ++ EM+ +
Sbjct: 350 ERAEELILEMLDR 362
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 140/257 (54%), Gaps = 5/257 (1%)
Query: 211 ENAKKVFDVMTVK--PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG--CRPNELTYNA 266
E+A+ VFD + + P++ +YN ++NG C + +EA + ++ M + G C P+ ++Y+
Sbjct: 34 EDARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I G G +D+ +M NV T+ S++ LC D+A+ L ++++
Sbjct: 94 VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PD +Y +++GFC G+ EAI LK+MR+ G++P V ++N++ L +NG A
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+ M + P +Y T++ G KG + ++ L+D M+R+G + + ++S L+
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272
Query: 447 YCEEGNVENVMQIAHEM 463
Y ++ VE M + +M
Sbjct: 273 YAKQEKVEEAMLVFSKM 289
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 11/254 (4%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGE 241
+++ + P+ TY +I CK G +E+A F+ M + P + YN++I+G C +
Sbjct: 289 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 348
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
E A++ + EM++RG N + +N++I C GRV E++ L M G K ++ T+ +
Sbjct: 349 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 408
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C+ GK D+A L +++ M PD +Y +ING+CKI + +A+ L +EM + G
Sbjct: 409 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSG 468
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P + ++N + + L + A L + + +YN I+ GLC K
Sbjct: 469 VSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNK------ 522
Query: 422 EDLVDRMIRSGHNL 435
L D +R NL
Sbjct: 523 --LTDDALRMFQNL 534
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 186/380 (48%), Gaps = 8/380 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P Y Y ++ H L+ + +++N + + S L+ AY + V+ A
Sbjct: 226 PEITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPNHYVFSILVCAYAKQEKVEEA 282
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + +Q +Y +++G+L + ++ A +F Q++ E + P ++ Y ++I
Sbjct: 283 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI-VYNSLIH 341
Query: 203 GYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
G C E A+++ M + N + +N++I+ CK+G + E++K + M+ G +P
Sbjct: 342 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 401
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TY+ +I G C+ G++DEA L+A M G K + T+ +++ G C + + A+
Sbjct: 402 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLF 461
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
R + + ++PD+ +Y +++ G + ++ A L + G + + ++N + L +N
Sbjct: 462 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKN 521
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
D A+ + + + MD ++N +I L + GR + +DL +G ++
Sbjct: 522 KLTDDALRMFQNLCLMDLKLEARTFNIMIDAL-LKVGRNDEAKDLFVAFSSNGLVPNYWT 580
Query: 440 YSCLLKGYCEEGNVENVMQI 459
Y + + +G +E + Q+
Sbjct: 581 YRLMAENIIGQGLLEELDQL 600
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 212/483 (43%), Gaps = 40/483 (8%)
Query: 3 TPRRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVI 62
+P + L S PD + T V R PK IS + +I
Sbjct: 95 SPLQYLNATSPKPDPPATEATTTMVEPR-----KKPKFISHES------------AINLI 137
Query: 63 YEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLS----HSLISIAASLLKNS 118
+T+P AL FN + + H Y I L ++ ++ + +
Sbjct: 138 KRETDPQRALEIFNRVAEQR----GFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYET 193
Query: 119 NKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQI-ENGACLYSYNSLLGVLVRVN----- 172
K + L+K + + + F I L + ++ L +LV N
Sbjct: 194 CKFHEGIFLNLMKHFSKLSLHERVVEMFDAIXPIVREKPSLKAISTCLNLLVESNQSSIT 253
Query: 173 ----SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----P 224
I A E ++ K +V P++ TY+T+I G C G ++ A ++F+ M K P
Sbjct: 254 AKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILP 313
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
+ L YN +INGFC +++ A K M M GC PN Y+A++ G C GR++EAK +
Sbjct: 314 DALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVF 373
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M+ G K + + +++ C G+ D+A+ L+++ E D ++ V++ G C+
Sbjct: 374 DEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCRE 433
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G+ +EA +L+ + G+ S+ V L GEL +A L+ M LP+F +
Sbjct: 434 GRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATS 493
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
N ++ LC A G++ D + ++ G + ++ L++ C E + ++ ++V
Sbjct: 494 NELLVHLCEA-GKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 552
Query: 465 TKK 467
++
Sbjct: 553 IQE 555
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 88/162 (54%), Gaps = 3/162 (1%)
Query: 310 GKFDQAVGYLRNVMEANMN-PDVKSYEVVINGFCKIGKSDEAISLLKEMRARG-LKPTVF 367
G D A + + +++++ P++ +Y +ING C G+ EAI L +EM ++ + P
Sbjct: 257 GDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDAL 316
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++NA+ ++DRA+ +++ M + C PN +Y+ ++ G C +GR+++ +++ D
Sbjct: 317 TYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFC-KEGRLEEAKEVFDE 375
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
M G D Y+ L+ +C G V+ M++ +M K R
Sbjct: 376 MKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCR 417
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 146/282 (51%), Gaps = 4/282 (1%)
Query: 188 NVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEE 244
N P++ Y +I GYC G +E+A KVF+ M PN+ Y +I+G CK G++E
Sbjct: 206 NGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + M+ G PN +TY A+I G C G + A L+ M NG N T ++
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
LC K ++A +L ++++ + + Y +I+G CK GK D A L+++M + G P
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
S++++ L +L +A L+L+ M + + V+Y II L G + + +
Sbjct: 386 DAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS-EGPKKI 444
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D+MI +G N D Y+ ++ YCEEG +E+ + +MV +
Sbjct: 445 FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR 486
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 153/309 (49%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+L+ ++ A + F + N P+V TYT +I G CK G +E A +F M
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGM-DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
++PN++ Y +I G C +G L+ A + ++ M G PN+ T++ +I LC +V
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA++ + + G K N + S++ GLC GK D A ++ ++ PD SY +
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G C+ K +A +L++M +G++ + ++ + LV + + +M
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ V+Y + C +GRM+D E ++ +M+ G + Y+ L++GY G V
Sbjct: 454 NPDIVTYTVFVRSYC-EEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAF 512
Query: 458 QIAHEMVTK 466
MV K
Sbjct: 513 STFEVMVGK 521
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 164/334 (49%), Gaps = 5/334 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y + G ++ A+ F + +Y L+ L + ++ A F ++V E
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV-EA 276
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
+ P+V TYT +I+G C G ++ A ++ +M PN ++ +I+ CK+ ++EEA
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ + ++ +G + NE+ Y ++I GLC G++D A LM KM GF + ++ S++ G
Sbjct: 337 QLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC K QA L ++ME + +Y ++I+ + S+ + +M A G+ P
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPD 456
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ ++ R E G ++ A ++ QM PN V+YNT+I G G +
Sbjct: 457 IVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA-NLGLVSQAFSTF 515
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ M+ G + Y+ LL+ ++ + +N + I
Sbjct: 516 EVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 154/343 (44%), Gaps = 44/343 (12%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
N+LL L R E ++ N+ TYTT+I YC G I AK+ +
Sbjct: 45 NTLLMALARHRMFPDMESLASRMPARNL-----RTYTTLINAYCLAGDIPAAKQHLTSLL 99
Query: 221 --TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ P+ AY + + G+C+ G L A + M RGC TY A+++GL G V
Sbjct: 100 HAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVR 159
Query: 279 EAKMLMAKMRL-----------------------------------NGFKDNVSTHKSML 303
EA + MR NGF+ N+ + +++
Sbjct: 160 EAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALI 219
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C G+ + A+ + +P+V++Y +I+G CK GK + A+ L M GL+
Sbjct: 220 DGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLE 279
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V ++ A+ + G L A LL M +PN +++ +I LC + ++++ +
Sbjct: 280 PNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC-KREKVEEAQL 338
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ +++ G ++ +Y+ L+ G C+ G ++ ++ +M+++
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE 381
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 154/316 (48%), Gaps = 12/316 (3%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLGVLVRVNSIKLAEEFFHQI 184
+ LI+ + G+++ A H + NG ++++ L+ L + ++ A+ F +
Sbjct: 286 TALIQGQCNEGHLQCAFRLLHLMET--NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSL 343
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
VK+ V +V YT++I G CK G I+ A ++ M + P+ +Y+++I+G C++ +
Sbjct: 344 VKKGVKVNEV-VYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKK 402
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L +A + +MM +G + + +TY +I L + K + KM G ++ T+
Sbjct: 403 LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTV 462
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ C G+ + A + +++ + P++ +Y +I G+ +G +A S + M +G
Sbjct: 463 FVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKG 522
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP---NFVSYNTIICGLCMAKGRM 418
KP S+ + R++V+ D ++ + K D + + + +I GL + KG +
Sbjct: 523 WKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGL-LQKGSV 581
Query: 419 QDVEDLVDRMIRSGHN 434
+ L+ M G+
Sbjct: 582 AEFSSLLSVMKEHGYQ 597
>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
Length = 561
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 176/341 (51%), Gaps = 9/341 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + RG ++ A+ F + ++ +Y YNSL+ + N+ A +++V +
Sbjct: 92 LIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKG 151
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P S Y+ +I G C+ G + +A ++ MT V N+ + +I+GFCK G ++EA
Sbjct: 152 LTPSPAS-YSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEA 210
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++MM PNE+T+N MI G C G + +A L +M G + T++S++
Sbjct: 211 TRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISV 270
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+C+ +A ++ ++ + S +++GFCK G ++ L KEM A P
Sbjct: 271 VCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEGSAE---ILCKEMLAGHFLPN 327
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+++N L GEL++A +L M + CL N V++NT+I G CMA G++Q DL+
Sbjct: 328 SYTYNCFLDYLANEGELEKAKVLHAAMLE-GCLANTVTFNTLIKGFCMA-GQIQGAIDLM 385
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ SG D YS ++ C+ G+ ++ +EM+ K
Sbjct: 386 QKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYK 426
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 117/244 (47%), Gaps = 14/244 (5%)
Query: 205 CKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
CK+G++ NLLA N I+ K G EA+K M +RG PNE+TY
Sbjct: 43 CKLGIV-------------ANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTY 89
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+I+ LC G +++A + +MR G + V + S++ G C F QA G L ++
Sbjct: 90 AILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVA 149
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
+ P SY +I G C+ G A+ L +EM + V++F A+ ++G +D
Sbjct: 150 KGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDE 209
Query: 385 AILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLL 444
A L +M + +PN V++N +I G C G ++ L D+M+ G D Y L+
Sbjct: 210 ATRLFHKMMESSLVPNEVTFNVMIEGYCRV-GNIRKAFQLYDQMLDRGLTPDNYTYRSLI 268
Query: 445 KGYC 448
C
Sbjct: 269 SVVC 272
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 149/320 (46%), Gaps = 45/320 (14%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI +G++ +A+ + + +Y++ +L+ + ++ A FH++++
Sbjct: 160 SPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMME 219
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMI---------- 233
++VP +V T+ MI GYC++G I A +++D M + P+ Y ++I
Sbjct: 220 SSLVPNEV-TFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAM 278
Query: 234 -------------------------NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 268
+GFCK+G E K EM+ PN TYN +
Sbjct: 279 KAKEFVADLENNCAVLNSFSLTALMHGFCKEGSAEILCK---EMLAGHFLPNSYTYNCFL 335
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
L G +++AK+L A M L G N T +++KG C+ G+ A+ ++ E+
Sbjct: 336 DYLANEGELEKAKVLHAAM-LEGCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFF 394
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
PD SY +IN CK+G +++A L EM +GLKP + ++ + R +GE D+ + +
Sbjct: 395 PDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTILIRWCNIHGEFDKGLGI 454
Query: 389 LKQMPQMDCLPNFVSYNTII 408
M + LP + I+
Sbjct: 455 YSDM--VTVLPEYPEVYNIV 472
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 1/227 (0%)
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G + ++ + + G N L NA I L +GR EA+ L M G N T+
Sbjct: 30 GHIHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTY 89
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ LC G + A+ + E + V Y +ING+CK +A LL EM A
Sbjct: 90 AILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVA 149
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+GL P+ S++ + L G+L A+ L ++M + N ++ +I G C G M
Sbjct: 150 KGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFC-KDGNMD 208
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ L +M+ S + ++ +++GYC GN+ Q+ +M+ +
Sbjct: 209 EATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDR 255
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 157/309 (50%), Gaps = 5/309 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L + N L+ + + + +I+K P+ T TT+++G C G ++ +
Sbjct: 87 LVTLNILINCFCHLGQMSFSFSVLGKILKLGY-QPNTITLTTLMKGLCLKGEVQKSVHFH 145
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D + + N ++Y T++NG CK GE A K + + + N + YN +I GLC +
Sbjct: 146 DKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKD 205
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
V+EA ++M G NV T+ +++ G C+ G+ A L ++ N+NP+V +Y
Sbjct: 206 KLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTY 265
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I+ CK GK EA +LL EM RG V ++ ++ +N LD+A L +M +
Sbjct: 266 AILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKE 325
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN +Y +I GLC GR++D + L ++ G +D Y+ ++ G C+EG ++
Sbjct: 326 WGIQPNKYTYTALIDGLCKG-GRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLD 384
Query: 455 NVMQIAHEM 463
+ I +M
Sbjct: 385 EALAIKSKM 393
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 165/329 (50%), Gaps = 9/329 (2%)
Query: 109 SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL--YSYNSLLG 166
S+ +LK + + ++ L+K +G V+ ++ FH K + G + SY +LL
Sbjct: 108 SVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSV-HFHD-KVVAQGFQMNQVSYGTLLN 165
Query: 167 VLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--- 223
L ++ + A +F ++++++ +V Y T+I G CK ++ A + M +
Sbjct: 166 GLCKIGETRCAIKFL-RMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIF 224
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
PN++ Y T+I GFC G+L A +NEM+ + PN TY +I LC G+V EAK L
Sbjct: 225 PNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNL 284
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+A+M G +V T+ S+L G C D+A + E + P+ +Y +I+G CK
Sbjct: 285 LAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCK 344
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
G+ +A L +++ +G V ++N + L + G LD A+ + +M C+PN V+
Sbjct: 345 GGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVT 404
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ II L K E L+ MI G
Sbjct: 405 FEIIIRSL-FKKDENDKAEKLLHEMIAKG 432
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 132/249 (53%), Gaps = 1/249 (0%)
Query: 215 KVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
K +V ++PNL+ N +IN FC G++ + + +++ G +PN +T ++ GLC+
Sbjct: 76 KQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLK 135
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G V ++ K+ GF+ N ++ ++L GLC +G+ A+ +LR + +++ +V Y
Sbjct: 136 GEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMY 195
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G CK +EA EM ARG+ P V ++ + G+L A LL +M
Sbjct: 196 NTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMIL 255
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ PN +Y +I LC +G++++ ++L+ M G D Y+ LL G+C+ N++
Sbjct: 256 KNINPNVYTYAILIDALC-KEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLD 314
Query: 455 NVMQIAHEM 463
+ +M
Sbjct: 315 KATALFMKM 323
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L+G + A ++++ +N+ P+V TY +I CK G ++ AK +
Sbjct: 229 TYTTLIGGFCLAGQLTGAFSLLNEMILKNI-NPNVYTYAILIDALCKEGKVKEAKNLLAE 287
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + +++ Y ++++GFCK L++A +M G +PN+ TY A+I GLC GR
Sbjct: 288 MHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGR 347
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ +A+ L + + G +V T+ M+ GLC G D+A+ + + P+V ++E+
Sbjct: 348 LKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEI 407
Query: 337 VINGFCKIGKSDEAISLLKEMRARG------------LKPTVFSF 369
+I K ++D+A LL EM A+G LKPT + F
Sbjct: 408 IIRSLFKKDENDKAEKLLHEMIAKGLLRFRNFHEIEDLKPTAYLF 452
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+M P ++ + ++ K A +M +G PN +T N +I C G++
Sbjct: 45 LMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMS 104
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+ ++ K+ G++ N T +++KGLC+ G+ ++V + V+ + SY ++
Sbjct: 105 FSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLL 164
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG CKIG++ AI L+ + V +N + L ++ ++ A +M
Sbjct: 165 NGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIF 224
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
PN ++Y T+I G C+A G++ L++ MI N + Y+ L+ C+EG V+
Sbjct: 225 PNVITYTTLIGGFCLA-GQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKN 283
Query: 459 IAHEM 463
+ EM
Sbjct: 284 LLAEM 288
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D A+ ++ + P + + ++ K+ AISL K+M +G++P + + N +
Sbjct: 34 DDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNIL 93
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
G++ + +L ++ ++ PN ++ T++ GLC+ KG +Q D+++ G
Sbjct: 94 INCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCL-KGEVQKSVHFHDKVVAQG 152
Query: 433 HNLDFTMYSCLLKGYCEEG 451
++ Y LL G C+ G
Sbjct: 153 FQMNQVSYGTLLNGLCKIG 171
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 84/192 (43%), Gaps = 3/192 (1%)
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
I+ VD+A M L + +L L + + A+ + + + P++
Sbjct: 29 IDNVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLV 88
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+ ++IN FC +G+ + S+L ++ G +P + + + L GE+ +++ ++
Sbjct: 89 TLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKV 148
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR-SGHNLDFTMYSCLLKGYCEEG 451
N VSY T++ GLC ++ L RMI S L+ MY+ ++ G C++
Sbjct: 149 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKFL--RMIEDSSTGLNVVMYNTIIDGLCKDK 206
Query: 452 NVENVMQIAHEM 463
V EM
Sbjct: 207 LVNEAYDFYSEM 218
>gi|255660986|gb|ACU25662.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 376
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 155/294 (52%), Gaps = 4/294 (1%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKK 239
+++K++ D TY ++ G+CK G I+ + V ++ K +L AY+ MING CK+
Sbjct: 83 ELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKE 142
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
L+ A +N M+ GC+PN YN +I GL + ++A + +M N+ T+
Sbjct: 143 ANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITY 202
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+++ GLC F +A ++ +++ +NP V +Y +++ G C K ++A+ L ++ +
Sbjct: 203 NTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTS 262
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
+G KP V N + L G++ A+ L M + C PN VS+NT++ G G ++
Sbjct: 263 KGFKPDVQMHNVLIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF-YKDGDIR 321
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKL 473
+ + R++R+G D Y+ LKG C + + + H+ VTKK L K+
Sbjct: 322 NALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKI 375
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 130/264 (49%), Gaps = 4/264 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + G + ++ A+Q ++Y++++ L + ++ A + ++K
Sbjct: 100 LVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSG 159
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEA 245
P+ Y T+I G E+A +VF M PN++ YNT+ING CK EA
Sbjct: 160 C-KPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITYNTLINGLCKNEMFGEA 218
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ E++++G P +TY+ ++ GLC++ +V++A L ++ GFK +V H ++ G
Sbjct: 219 YNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHG 278
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC VGK A+ ++ P++ S+ ++ GF K G A+ + + GL+P
Sbjct: 279 LCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPD 338
Query: 366 VFSFNAVFRILVENGELDRAILLL 389
+ S+N + L + AIL L
Sbjct: 339 IISYNITLKGLCSCNRISDAILFL 362
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 38/267 (14%)
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMI---------------------------- 268
C+ G+++ A++ E++ P+ + YNAM+
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60
Query: 269 ------YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
GL NG+VDE + M+ +GF ++ T+ ++ G C G D+++ L
Sbjct: 61 SFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ D +Y +ING CK D A+S+L M G KP +N + LV +
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKF 180
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM-QDVEDLVDRMIRSGHNLDFTMYS 441
+ AI + ++M M C PN ++YNT+I GLC K M + +LV ++ G N YS
Sbjct: 181 EDAIRVFREMGTMHCSPNIITYNTLINGLC--KNEMFGEAYNLVKELLDKGLNPGVITYS 238
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKG 468
L+KG C + VE +Q+ ++ VT KG
Sbjct: 239 MLMKGLCLDHKVEKALQLWNQ-VTSKG 264
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----K 214
+ YN+L+ LV + + A F ++ + P++ TY T+I G CK M A K
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHC-SPNIITYNTLINGLCKNEMFGEAYNLVK 223
Query: 215 KVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
++ D + P ++ Y+ ++ G C ++E+A + N++ ++G +P+ +N +I+GLC
Sbjct: 224 ELLD-KGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCSV 282
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++ A L M N+ +H ++++G G A+ ++ + PD+ SY
Sbjct: 283 GKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISY 342
Query: 335 EVVINGFCKIGKSDEAISLLKE 356
+ + G C + +AI L +
Sbjct: 343 NITLKGLCSCNRISDAILFLHD 364
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 108/219 (49%), Gaps = 4/219 (1%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+S+ ++K+ K + + LI + AI F + + + +YN+L+
Sbjct: 149 VSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITYNTLING 208
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
L + A +++ + + P V TY+ +++G C +E A ++++ +T KP
Sbjct: 209 LCKNEMFGEAYNLVKELLDKGL-NPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKP 267
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
++ +N +I+G C G+++ A +M C PN +++N ++ G +G + A ++
Sbjct: 268 DVQMHNVLIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIW 327
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
A++ NG + ++ ++ LKGLC + A+ +L + +
Sbjct: 328 ARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAV 366
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 38/165 (23%)
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G D A + ++E+ ++PD Y ++NG+ ++ K + L + M + G + +V
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
SFN + R L +NG++D I + + M
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMK--------------------------------- 86
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLL 471
+SG D Y L+ G+C+ G ++ + + EM +KG +L
Sbjct: 87 ---KSGFVEDSITYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVL 127
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 163/312 (52%), Gaps = 9/312 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+L+ + + + + A + K V P DV TY ++G CK G I++A ++F+
Sbjct: 281 TFNTLMSGMCKASDLNSANALRGLMAKAGVAP-DVYTYGAFMQGLCKAGRIQDAVEMFEE 339
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V PN + + T+I+ CK+G + + EM RG + + + YNA+ GLC
Sbjct: 340 MRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRD 399
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ A ++ +MR NG K + T+ +++ G C G+ D A+ + + + + D +Y
Sbjct: 400 LKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTT 459
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G K G+S ++ +L EM GL+P ++ V +N ++ LLK+M
Sbjct: 460 LISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKG 519
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P V+YN ++ G C+ G+M++ + L++ M+ G D Y+ LL G+C+ G V +
Sbjct: 520 RKPGVVTYNVVMNGFCIL-GQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRD- 577
Query: 457 MQIAHEMVTKKG 468
A E+ + KG
Sbjct: 578 ---AEELKSAKG 586
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 155/296 (52%), Gaps = 8/296 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y+Y + + L + I+ A E F ++ +E V P+ +TT+I +CK G + ++
Sbjct: 314 VYTYGAFMQGLCKAGRIQDAVEMFEEM-RERGVNPNTVVFTTLIDAHCKEGNVAAGLELH 372
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M +K +L+AYN + NG C+ +L+ A + EM N G +P+++TY +I G C
Sbjct: 373 REMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKE 432
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D A + +M G + T+ +++ GL G+ + L +MEA + PD +Y
Sbjct: 433 GELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTY 492
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+VI+ FCK LLKEM+ +G KP V ++N V G++ A +LL M
Sbjct: 493 TMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLN 552
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+ P+ ++YN ++ G C G+++D E+L G DF +Y+ L+ + ++
Sbjct: 553 IGVCPDDITYNILLDGHC-KHGKVRDAEELKS---AKGMVSDFGLYTSLINEFVKK 604
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 149/303 (49%), Gaps = 6/303 (1%)
Query: 170 RVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNL 226
R+ S+ A F+ Q++ V PP+ + ++R + G + +A+ +FD M V P +
Sbjct: 221 RLPSVPEAYAFYLQLLDAGV-PPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTV 279
Query: 227 LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 286
+ +NT+++G CK +L A M G P+ TY A + GLC GR+ +A + +
Sbjct: 280 VTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEE 339
Query: 287 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 346
MR G N +++ C G + R + + D+ +Y + NG C++
Sbjct: 340 MRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRD 399
Query: 347 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNT 406
A +++EMR GLKP ++ + + GELD A+ + ++M + V+Y T
Sbjct: 400 LKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTT 459
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+I GL + GR D E ++ M+ +G D T Y+ ++ +C+ +V+ ++ EM
Sbjct: 460 LISGLSKS-GRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEM-QN 517
Query: 467 KGR 469
KGR
Sbjct: 518 KGR 520
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 121/243 (49%), Gaps = 6/243 (2%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
V+ L A++ ++N + + EA ++++ G P +N ++ + +G++ A+
Sbjct: 208 VRVPLPAWSDLMN---RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASAR 264
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM-EANMNPDVKSYEVVING 340
+ +M G V T +++ G+C + A LR +M +A + PDV +Y + G
Sbjct: 265 NMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSA-NALRGLMAKAGVAPDVYTYGAFMQG 323
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
CK G+ +A+ + +EMR RG+ P F + + G + + L ++M +
Sbjct: 324 LCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTD 383
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+YN + GLC + ++ D+V+ M +G D Y+ L+ G+C+EG ++ M++
Sbjct: 384 LVAYNALANGLCRVRD-LKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMK 442
Query: 461 HEM 463
EM
Sbjct: 443 QEM 445
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 171/353 (48%), Gaps = 41/353 (11%)
Query: 153 ENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
+ G C + SY +++ + + A +H+++ ++P +V TY+++I CK
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILP-NVVTYSSIIAALCKAQA 249
Query: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
++ A +V M V PN YN++++G+C G+ +EA + +M + G P+ +TYN+
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
++ LC NGR EA+ + M G K ++T+ ++L+G G + G L ++
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
++P+ + ++I + K GK D+A+ + +MR +GL P ++ V IL ++G ++ A+
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCM--------------------------------- 413
+QM P + YN++I LC+
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489
Query: 414 -AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+GR+ + E L D M+R G D YS L+ GYC G ++ ++ MV+
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 156/307 (50%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS++ K A F ++ + V PDV TY +++ CK G A+K+FD
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT +KP + Y T++ G+ KG L E ++ M+ G PN ++ +I G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A ++ +KMR G + T+ +++ LC G+ + A+ Y +++ ++P Y
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+ C K D+A L+ EM RG+ FN++ + G + + L M ++
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ ++Y+T+I G C+A G+M + L+ M+ G D Y+ L+ GYC+ +E+
Sbjct: 510 VKPDIITYSTLIDGYCLA-GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 457 MQIAHEM 463
+ + EM
Sbjct: 569 LVLFREM 575
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 148/281 (52%), Gaps = 6/281 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM-----TVKPNLLAYNTMINGFCKKGELEEAK 246
P+V +Y +++G C + A ++ +M P++++Y T+INGF K+G+L++A
Sbjct: 160 PNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+EM++RG PN +TY+++I LC +D+A ++ M NG N T+ S++ G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+ +A+G+L+ + + PDV +Y +++ CK G+ EA + M RGLKP +
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
++ + + G L LL M + PN ++ +IC +G++ +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA-KQGKVDQAMLVFS 398
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+M + G N D Y ++ C+ G VE+ M+ +M+ ++
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 182/372 (48%), Gaps = 8/372 (2%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P Y Y ++ H L+ + +++N + + S LI AY +G V A
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPNHYVFSILICAYAKQGKVDQA 393
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + +Q +Y +++G+L + ++ A +F Q++ E + P ++ Y ++I
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI-VYNSLIH 452
Query: 203 GYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRP 259
C + AK++ M + + + +N++I+ CK+G + E++K + M+ G +P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ +TY+ +I G C+ G++DEA L+A M G K + T+ +++ G C + + + A+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
R + + ++PD+ +Y +++ G + ++ A L + G + + ++N + L +N
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
D A+ + + + D ++N +I G + GR + +DL + +G D
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMI-GALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 440 YSCLLKGYCEEG 451
YS + + E+G
Sbjct: 692 YSLMAENLIEQG 703
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 176/390 (45%), Gaps = 40/390 (10%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+ + S++KN + + ++ Y G K AI + + + +YNSL+
Sbjct: 254 MEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC---------------------- 205
L + A + F + K + P+++TY T+++GY
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGL-KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372
Query: 206 -------------KMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
K G ++ A VF M + P+ + Y T+I CK G +E+A +
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M++ P + YN++I+ LCI + D+AK L+ +M G + S++ C
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G+ ++ ++ + PD+ +Y +I+G+C GK DEA LL M + G+KP ++
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + + ++ A++L ++M P+ ++YN I+ GL + R ++L +
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR-RTAAAKELYVGIT 611
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
SG L+ + Y+ +L G C+ + +++
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRM 641
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 141/264 (53%), Gaps = 6/264 (2%)
Query: 150 KQIENGACLYS--YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ ++ G CL + +NS++ + + +E+ F +V+ V PD+ TY+T+I GYC
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV-KPDIITYSTLIDGYCLA 527
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G ++ A K+ M +KP+ + YNT+ING+CK +E+A EM + G P+ +TY
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N ++ GL R AK L + +G + +ST+ +L GLC D+A+ +N+
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 647
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDR 384
++ + +++ ++I K+G++DEA L + A GL P V +++ + L+E G L+
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707
Query: 385 AILLLKQMPQMDCLPNFVSYNTII 408
L M + C N N+I+
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIV 731
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 164/361 (45%), Gaps = 45/361 (12%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRG 203
F + + GA +Y N L + R +S A ++++ + V P++ TY ++
Sbjct: 42 FDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYGILMGS 100
Query: 204 YCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKK-CMNEMMNRGCRP 259
C G ++ + K + +A+ M+ G C +A + M GC P
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNG-----------------FKD-------- 294
N +YN ++ GLC + R EA L+ M +G FK+
Sbjct: 161 NVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 295 ------------NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
NV T+ S++ LC D+A+ L ++++ + P+ ++Y +++G+C
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
G+ EAI LK+M + G++P V ++N++ L +NG A + M + P
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+Y T++ G KG + ++ L+D M+R+G + + ++S L+ Y ++G V+ M + +
Sbjct: 341 TYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399
Query: 463 M 463
M
Sbjct: 400 M 400
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P++ +Y +++ C G+ D + L + +G +F + + L + A+
Sbjct: 87 VTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAM 146
Query: 387 -LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL--DFTMYSCL 443
++L++M Q+ C+PN SYN ++ GLC R Q+ +L+ M G + D Y+ +
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLC-DDNRSQEALELLQMMPDDGGDCPPDVVSYTTV 205
Query: 444 LKGYCEEGNVENVMQIAHEMVTK 466
+ G+ +EG+++ HEM+ +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDR 228
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 4/214 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y ++ A+ F + + + +YN +L L + A+E + I E+
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT-ES 613
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEA 245
++STY ++ G CK + + A ++F + ++ +N MI K G +EA
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + G P+ TY+ M L G ++E L M NG N S+++
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
L G +A YL + E + + + + + ++
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 123/223 (55%), Gaps = 3/223 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
DV +Y++MI +CK G +A +V+ M KPN YN +INGFC+ ++ +A K
Sbjct: 438 DVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIY 497
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
EM + GC P +TYN +I GLC + EA L +M GFK ++ T+ S+++GLC
Sbjct: 498 IEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRD 557
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
K D A+ +++A + DV + ++I+G C GK DEA + EM+ + P + ++
Sbjct: 558 KKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTY 617
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
N + E G +D+A L + P+ V+YNT I GLC
Sbjct: 618 NTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLC 660
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 174/355 (49%), Gaps = 12/355 (3%)
Query: 115 LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSI 174
+++ N L D F+ + Y D A++ H A L +YN +L L +
Sbjct: 119 VRSHNTLLDAFVRA--RRYSDADAFFASLS--HGAFGRRIAPNLQTYNIILRSLCARGDV 174
Query: 175 KLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNT 231
A F + + V PD TY+T++ G K ++NA + D M V+ + + YN
Sbjct: 175 DRAVSLFSSLRRRGVA-PDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233
Query: 232 MINGFCKKGELEEAKKCMNEMM-NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLN 290
+++G + G E+A K +++ + G PN TY M+ GLC GR EA + ++M N
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
+ + T+ ++ GLC G D A ++++A + DV Y +I GFC++G++ EA
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP-QMDCLPNFVSYNTIIC 409
G++ + ++N + + L+++G + A LLKQ+ C P+ V++ T+I
Sbjct: 354 WKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIH 412
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
GLC G ++++ SG LD YS ++ +C++G + ++ MV
Sbjct: 413 GLC-ENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMV 466
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 185/410 (45%), Gaps = 76/410 (18%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++++ RG+V A+ F ++ +Y++L+ L + + + A + ++
Sbjct: 164 ILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYG 223
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGELEE 244
V D Y ++ G + GM E A KV++ + PNL Y M++G CK G +E
Sbjct: 224 V-QADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKE 282
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + + MM + + +TY +I+GLC +G VD A + + M G +VS + S++K
Sbjct: 283 AGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIK 342
Query: 305 GLCVVG------KFDQAVGY-------LRNVM----------------------EANMNP 329
G C VG KF + G+ N+M +A+ +P
Sbjct: 343 GFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSP 402
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF----------------NAVF 373
D ++ +I+G C+ G ++ A +L++ R G + VFS+ N V+
Sbjct: 403 DKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVY 462
Query: 374 RILVENG-------------------ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
+ +V++G +++ AI + +M C P ++YNT+I GLC A
Sbjct: 463 KNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKA 522
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ + Q+ L M+ G D Y+ L++G C + V+ ++I E++
Sbjct: 523 E-KYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEIL 571
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 156/375 (41%), Gaps = 82/375 (21%)
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
HQA + +Y L+ L R + A + +VK +V DVS Y ++I+G+C+
Sbjct: 295 HQADTV-------TYGILIHGLCRSGDVDSAARVYSDMVKAGLVL-DVSVYNSLIKGFCE 346
Query: 207 MGMIENAKKVFD--------------VMT------------------------VKPNLLA 228
+G A K +D +MT P+ +
Sbjct: 347 VGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVT 406
Query: 229 YNTMING-----------------------------------FCKKGELEEAKKCMNEMM 253
+ T+I+G FCK G +A + M+
Sbjct: 407 FGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMV 466
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
GC+PN YNA+I G C ++++A + +M NG + T+ +++ GLC K+
Sbjct: 467 KDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQ 526
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A + ++E PD+++Y +I G C+ K D A+ + E+ GL+ V N +
Sbjct: 527 EASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILI 586
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L G++D A + +M + +C PN V+YNT++ G G + L ++ +G
Sbjct: 587 HGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGF-YEIGSIDKAASLWTAILDNGL 645
Query: 434 NLDFTMYSCLLKGYC 448
D Y+ +KG C
Sbjct: 646 KPDIVTYNTRIKGLC 660
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 313 DQAVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR----ARGLKPTVF 367
D A+ R++ NP V+S+ +++ F + + +A + + R + P +
Sbjct: 100 DAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQ 159
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++N + R L G++DRA+ L + + P+ V+Y+T++ GL ++ + DL+D
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLA-KHDQLDNALDLLDE 218
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
M G D Y+ LL G G E M++ ++V G
Sbjct: 219 MPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPG 259
>gi|195650415|gb|ACG44675.1| hypothetical protein [Zea mays]
Length = 558
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 148/287 (51%), Gaps = 16/287 (5%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
VS Y ++ + G A +F M V P+ ++ T + C++G +EAK ++EM+
Sbjct: 145 VSDYNDILSALARAGDHATAVALFRAMPVAPDAHSFATAVQCLCRQGAPDEAKLALDEMV 204
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG RP+ T++A++ LC GRV +A ++ M G + + T+ S++ GLC VG+ +
Sbjct: 205 ARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMLGLGCEPTIRTYNSLVGGLCYVGRLE 264
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ L+ + ++ + PD+ ++ +V++GFCK+G+++EA ++ + GL PT F++NA+
Sbjct: 265 EALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTTFTYNALL 324
Query: 374 RILVENGELDRAILLLKQM---PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ G +A LL +M CLP+ S+ ++ L A G RM R
Sbjct: 325 NGXCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTALLRA-GETSAAWQTYKRMER 383
Query: 431 SGHNLDFTMYSCLLKGYCEE--------GNVEN----VMQIAHEMVT 465
+G +D L +G C G+ E V+ HE V+
Sbjct: 384 AGFEVDGRALDTLARGLCRRCATDASALGDAEEVFGKVVASGHEPVS 430
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 158/334 (47%), Gaps = 16/334 (4%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN +L L R A F + V PD ++ T ++ C+ G + AK D M
Sbjct: 148 YNDILSALARAGDHATAVALFRAMP----VAPDAHSFATAVQCLCRQGAPDEAKLALDEM 203
Query: 221 TV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+P++ ++ ++ CK+G + +A + ++ M+ GC P TYN+++ GLC GR+
Sbjct: 204 VARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMLGLGCEPTIRTYNSLVGGLCYVGRL 263
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA L+ K++ + ++ T +L G C VG+ ++A + + ++P +Y +
Sbjct: 264 EEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTTFTYNAL 323
Query: 338 INGFCKIGKSDEAISLLKEM---RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+NG CK G +A +LL EM P SF V L+ GE A K+M +
Sbjct: 324 LNGXCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTALLRAGETSAAWQTYKRMER 383
Query: 395 MDCLPNFVSYNTIICGLC----MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+ + +T+ GLC + D E++ +++ SGH Y + +
Sbjct: 384 AGFEVDGRALDTLARGLCRRCATDASALGDAEEVFGKVVASGHEPVSYTYCLMAQALARG 443
Query: 451 GNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
G V+ + + +MV +KG L+ + + T VV AL
Sbjct: 444 GEVDAAVALLEDMV-RKGYALRKRAY-TDVVRAL 475
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 136/290 (46%), Gaps = 20/290 (6%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YNSL+G L V ++ A E ++ K++ + PD+ T+T ++ G+CK+G E A +F
Sbjct: 247 IRTYNSLVGGLCYVGRLEEALELLKKL-KDSPLTPDIYTFTIVLDGFCKVGRTEEATAIF 305
Query: 218 D---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM---NRGCRPNELTYNAMIYGL 271
M + P YN ++NG CK+G +A + EM + C P++ ++ ++ L
Sbjct: 306 HDAIGMGLSPTTFTYNALLNGXCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTAL 365
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC--------VVGKFDQAVGYLRNVM 323
G A +M GF+ + ++ +GLC +G ++ G V+
Sbjct: 366 LRAGETSAAWQTYKRMERAGFEVDGRALDTLARGLCRRCATDASALGDAEEVFG---KVV 422
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ P +Y ++ + G+ D A++LL++M +G ++ V R L + G
Sbjct: 423 ASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRKGYALRKRAYTDVVRALCDRGRAR 482
Query: 384 RAI-LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
A+ +L+ M D +P ++ ++ G +GR D + ++ G
Sbjct: 483 DALQVLVLVMIVRDFVPGRNAFEALL-GELSRQGRWADAMTVYAAAVKRG 531
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 151/351 (43%), Gaps = 20/351 (5%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
+SD+ + ++ A G+ A+ F + +S+ + + L R + A+
Sbjct: 145 VSDY--NDILSALARAGDHATAVALFRAMPVAPDA---HSFATAVQCLCRQGAPDEAKLA 199
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFC 237
++V P V+T++ ++ CK G + A +V D M +P + YN+++ G C
Sbjct: 200 LDEMVARGFRP-SVATFSAVVGCLCKRGRVTKAMEVLDAMLGLGCEPTIRTYNSLVGGLC 258
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G LEEA + + ++ + P+ T+ ++ G C GR +EA + G
Sbjct: 259 YVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTTF 318
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVM---EANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
T+ ++L G C G +A L + +A PD S+ +V+ + G++ A
Sbjct: 319 TYNALLNGXCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTALLRAGETSAAWQTY 378
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAIL-----LLKQMPQMDCLPNFVSYNTIIC 409
K M G + + + + R L D + L + ++ P VSY +
Sbjct: 379 KRMERAGFEVDGRALDTLARGLCRRCATDASALGDAEEVFGKVVASGHEP--VSYTYCLM 436
Query: 410 GLCMAKGRMQDVE-DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+A+G D L++ M+R G+ L Y+ +++ C+ G + +Q+
Sbjct: 437 AQALARGGEVDAAVALLEDMVRKGYALRKRAYTDVVRALCDRGRARDALQV 487
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 185/396 (46%), Gaps = 40/396 (10%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
I + ++K+ S F +KL+ A I + +++ LY+YN L+
Sbjct: 70 IGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINC 129
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
R + I LA +++K P + T ++++ GYC I +A + D M +P
Sbjct: 130 FCRRSQISLALALLGKMMKLGY-EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA---- 280
+ + + T+I+G + EA ++ M+ RGC+PN +TY ++ GLC G +D A
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 281 -KMLMAKMRLN------------------------------GFKDNVSTHKSMLKGLCVV 309
KM AK+ N G + NV T+ S++ LC
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
++ A L +++E +NP+V ++ +I+ F K GK EA L EM R + P +F++
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+++ + LD A + + M DC PN V+YNT+I G C AK R+ + +L M
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK-RIDEGVELFREMS 427
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ G + Y+ L+ G+ + + +N + +MV+
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 135/244 (55%), Gaps = 4/244 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+L+ V+ + AE+ + +++K ++ PD+ TY+++I G+C ++ AK +F++
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ YNT+INGFCK ++E + EM RG N +TY +I+G
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+M+ +M +G N+ T+ ++L GLC GK ++A+ + + M P + +Y +
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK GK ++ L + +G+KP V +N + G + A L ++M +
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Query: 397 CLPN 400
LP+
Sbjct: 571 PLPD 574
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 175/333 (52%), Gaps = 9/333 (2%)
Query: 136 RGNVKAAIFWFH--QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
RG++ A + +A +IE +YS +++ L + A F ++ + V P+
Sbjct: 238 RGDIDLAFNLLNKMEAAKIEANVVIYS--TVIDSLCKYRHEDDALNLFTEMENKGV-RPN 294
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
V TY+++I C +A ++ M + PN++ +N +I+ F K+G+L EA+K +
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
EM+ R P+ TY+++I G C++ R+DEAK + M NV T+ +++ G C
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ D+ V R + + + + +Y +I+GF + D A + K+M + G+ P + ++N
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ L +NG+L++A+++ + + + P +YN +I G+C A G+++D DL +
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA-GKVEDGWDLFCSLSL 533
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G D +Y+ ++ G+C +G E + +M
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 156/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++ +N LL + ++ L ++ + + ++ TY +I +C+ I A +
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI-SHNLYTYNILINCFCRRSQISLALALL 143
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M +P+++ ++++NG+C + +A +++M+ G RP+ +T+ +I+GL ++
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+ EA L+ +M G + N+ T+ ++ GLC G D A L + A + +V Y
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
VI+ CK D+A++L EM +G++P V +++++ L A LL M +
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN V++N +I + +G++ + E L D MI+ + D YS L+ G+C ++
Sbjct: 324 RKINPNVVTFNALIDAF-VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 455 NVMQIAHEMVTK 466
+ M++K
Sbjct: 383 EAKHMFELMISK 394
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 95/192 (49%), Gaps = 1/192 (0%)
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++D+A L M + ++ +L + + KFD + + ++ ++ +Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++IN FC+ + A++LL +M G +P++ + +++ + A+ L+ QM +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ +++ T+I GL + + V LVDRM++ G + Y ++ G C+ G+++
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVA-LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 456 VMQIAHEMVTKK 467
+ ++M K
Sbjct: 244 AFNLLNKMEAAK 255
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 17/137 (12%)
Query: 143 IFWFHQAKQIENGACLY-------------SYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
I F QA+ +N ++ +YN+LL L + ++ A F + ++ +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSK 500
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+ P + TY MI G CK G +E+ +F ++ VKP+++ YNTMI+GFC+KG EEA
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 247 KCMNEMMNRGCRPNELT 263
+M G P+ T
Sbjct: 561 ALFRKMREDGPLPDSGT 577
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 161/310 (51%), Gaps = 4/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SY +++G L + I+ + ++V + + PD TY T+I K G ++A
Sbjct: 342 SYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKE 401
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
K + + Y+ +++ FC+KG ++EAK + +M +RGC P+ +TY A++ G C GR
Sbjct: 402 AQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGR 461
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEAK ++ +M +G K N ++ ++L GLC GK +A + E P+ +Y
Sbjct: 462 IDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGA 521
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
V++G + GK EA L +EM +G PT N + + L +N ++ A L++
Sbjct: 522 VMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKG 581
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C N V++ T+I G C G M+ ++D M SG + D Y+ L ++G ++
Sbjct: 582 CAINVVNFTTVIHGFCQI-GDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEA 640
Query: 457 MQIAHEMVTK 466
++ +M++K
Sbjct: 641 AELIVKMLSK 650
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 206/430 (47%), Gaps = 15/430 (3%)
Query: 57 IVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK 116
+V V+ Q + AL FF WA +Y H Y + DVL L A +L+
Sbjct: 169 LVCAVLRSQADERVALNFFYWADRQW----RYSHHPVVYYTMLDVLSKTKLCQGARRVLR 224
Query: 117 ----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+ ++ +Y G ++ A+ ++ L N+ + VLV+
Sbjct: 225 LMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGG 284
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAY 229
++ A +F ++ + + PD+ TY ++I+GYC + IE+A ++ + K P+ ++Y
Sbjct: 285 KLEKALKFLERM-QVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSY 343
Query: 230 NTMINGFCKKGELEEAKKCMNEMM-NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
T++ CK+ ++EE K M +M+ N P+++TYN +I+ L +G D+A + + +
Sbjct: 344 YTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQ 403
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
GF + + +++ C G+ D+A + ++ NPDV +Y +++GFC++G+ D
Sbjct: 404 DKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRID 463
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
EA +L++M G KP S+ A+ L +G+ A ++ + PN ++Y ++
Sbjct: 464 EAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVM 523
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
GL +G++ + DL M+ G + L++ C+ V + E + KG
Sbjct: 524 HGL-RREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLN-KG 581
Query: 469 RLLKLKNFLT 478
+ + NF T
Sbjct: 582 CAINVVNFTT 591
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 145/271 (53%), Gaps = 6/271 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKC 248
PDV TYT ++ G+C++G I+ AKK+ M KPN ++Y ++NG C G+ EA++
Sbjct: 444 PDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREM 503
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+N PN +TY A+++GL G++ EA L +M GF +++ LC
Sbjct: 504 INVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQ 563
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
K +A YL + +V ++ VI+GFC+IG + A+S+L +M G P +
Sbjct: 564 NQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVT 623
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ A+F L + G LD A L+ +M P V+Y ++I GR+ D+ +L+++M
Sbjct: 624 YTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQW-GRVDDMLNLLEKM 682
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
++ T+Y+ +++ C+ GN+E ++
Sbjct: 683 LK--RQPFRTVYNQVIEKLCDFGNLEEAEKL 711
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 47/232 (20%)
Query: 171 VNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLL 227
V + K EE ++ NVV +TT+I G+C++G +E A V D M + P+ +
Sbjct: 568 VEAKKYLEECLNKGCAINVV-----NFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAV 622
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
Y + + KKG L+EA + + +M+++G P +TY ++I+ GRVD+ L+ KM
Sbjct: 623 TYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKM 682
Query: 288 -RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA--------------------- 325
+ F+ + + +++ LC G ++A L V+
Sbjct: 683 LKRQPFR---TVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGV 739
Query: 326 --------------NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
N+ PD+K E V GK EA +L+ RG++
Sbjct: 740 AISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGIQ 791
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 172/364 (47%), Gaps = 46/364 (12%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
YSY L+ L ++ A +V++ ++ YT +I+G CK G I +A+ + D
Sbjct: 250 YSYTILIQGLYEARCVREALVLVFMMVQDGC-SLNLHMYTLLIKGLCKEGRIHDARGLLD 308
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M ++ P++ YN MI+G+CK G +++A M GC P++ TYN++IYGLC G
Sbjct: 309 EMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GG 367
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++DEA+ L+ GF V T +++ G C + D A+ N++ +N D+++Y
Sbjct: 368 KLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYG 427
Query: 336 VVIN-----------------------------------GFCKIGKSDEAISLLKEMRAR 360
V+IN G+CK+G A+ + K M
Sbjct: 428 VLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHE 487
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G P +++ ++ L+++ +L +A+ L+ +M + P ++Y T+I G C K +
Sbjct: 488 GCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQC-KKHEFDN 546
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRV 480
L + M ++G D Y+ L C+ G E A+ + +KG +L K T +
Sbjct: 547 AFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEE----AYSFLVRKGVVLT-KVTYTSL 601
Query: 481 VDAL 484
VD
Sbjct: 602 VDGF 605
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 198/436 (45%), Gaps = 63/436 (14%)
Query: 67 NPYHALFFFNW-ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFF 125
+P AL FF W A P + HT + A+ +L + N +KL
Sbjct: 65 DPATALAFFEWVARRPG-----FRHTAASHAALLQLLARRRAPA-------NYDKL---- 108
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS---YNSLLGVLVRVNSIKLAEEFFH 182
+ +I G +V+ A+ +++ + S YN L L+R + + + +
Sbjct: 109 VLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYS 168
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKK 239
+V+E ++P D TY TMI YCK G + A + F ++ ++ + N ++ G+C+
Sbjct: 169 HLVQEGLLP-DTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRT 227
Query: 240 GELEEA----------------------------KKCMNE-------MMNRGCRPNELTY 264
+L +A +C+ E M+ GC N Y
Sbjct: 228 SDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMY 287
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
+I GLC GR+ +A+ L+ +M L G +V T+ +M+ G C G+ A+G ++ +ME
Sbjct: 288 TLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALG-IKALME 346
Query: 325 AN-MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
N NPD +Y +I G C GK DEA LL ARG PTV +F + + +D
Sbjct: 347 QNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A+ + M +C + +Y +I + + K R+++ ++ ++ M +G + +Y+ +
Sbjct: 406 DALRVKSNMISSNCKLDLQAYGVLI-NVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSI 464
Query: 444 LKGYCEEGNVENVMQI 459
+ GYC+ G V +++
Sbjct: 465 IDGYCKVGMVGAALEV 480
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 176/393 (44%), Gaps = 57/393 (14%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ +I Y G V AA+ F K +E+ C ++Y SL+ L++ + A +
Sbjct: 462 TSIIDGYCKVGMVGAALEVF---KLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITK 518
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ +E+ + P V YTT+I+G CK +NA ++F++M + P+ AYN + + CK G
Sbjct: 519 M-QEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSG 577
Query: 241 ELEEAKK--------------------------------CMNEMMNRGCRPNELTYNAMI 268
EEA + +M+N GC+ + TY+ ++
Sbjct: 578 RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLL 637
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
LC +++EA ++ +M ++G K N+ + ++ + GK D A ++ +
Sbjct: 638 QALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHK 697
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P +Y V I+ +CKIG+ +EA L+ EM G+ P V +++ G +DRA
Sbjct: 698 PSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFST 757
Query: 389 LKQMPQMDCLPN----------FVSYNTIICGLCMAKG-----RMQDVEDLVDRMIRSGH 433
LK+M C PN F+ + I G + V L++RM++ G
Sbjct: 758 LKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGL 817
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
N YS ++ G+C+ +E + M+ K
Sbjct: 818 NPTVVTYSSIIAGFCKATRLEEACVLLDHMLGK 850
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 166/375 (44%), Gaps = 73/375 (19%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++YNSL+ L + AEE + + P V T+T +I GYCK I++A +V
Sbjct: 355 WTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPT-VITFTNLINGYCKAERIDDALRVKS 412
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM---------------------- 253
M K +L AY +IN KK L+EAK+ +NEM
Sbjct: 413 NMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVG 472
Query: 254 -------------NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ GC PN TY ++IYGL + ++ +A L+ KM+ +G V +
Sbjct: 473 MVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYT 532
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS-------- 352
++++G C +FD A + + + PD ++Y V+ + CK G+++EA S
Sbjct: 533 TLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVV 592
Query: 353 ------------------------LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
L+++M G K +++++ + + L + +L+ A+ +
Sbjct: 593 LTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSI 652
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
L QM N V+Y II + + +G+ + L + MI SGH T Y+ + YC
Sbjct: 653 LDQMTVSGVKCNIVAYTIIISEM-IKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYC 711
Query: 449 EEGNVENVMQIAHEM 463
+ G +E + EM
Sbjct: 712 KIGQIEEAEHLIGEM 726
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 148/314 (47%), Gaps = 21/314 (6%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y SL+ + + A ++V E D+ TY+ +++ CK + A + D
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGC-KADLYTYSVLLQALCKQKKLNEALSILDQ 655
Query: 220 MTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MTV K N++AY +I+ K+G+ + AK NEM++ G +P+ TY I C G+
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQ 715
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EA+ L+ +M +G +V T+ + G +G D+A L+ +++A+ P+ +Y +
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWL 775
Query: 337 VINGFCKIG----------------KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
++ F K+ + + LL+ M GL PTV +++++ +
Sbjct: 776 LLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKAT 835
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
L+ A +LL M PN Y +I C K +DV + D MI G Y
Sbjct: 836 RLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTD-MIEFGFQPQLESY 894
Query: 441 SCLLKGYCEEGNVE 454
L+ G C+EG+ +
Sbjct: 895 HYLIVGLCDEGDYD 908
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 22/277 (7%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
+Y + ++ I+ AE ++ ++ V P DV TY I G MG ++ A K+
Sbjct: 702 TYTVFISSYCKIGQIEEAEHLIGEMERDGVTP-DVVTYHIFINGCGHMGYMDRAFSTLKR 760
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKG----------------ELEEAKKCMNEMMNRGCRP 259
+ D + +PN Y ++ F K EL + + MM G P
Sbjct: 761 MVDA-SCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNP 819
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+TY+++I G C R++EA +L+ M N + ++K C + F + V ++
Sbjct: 820 TVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFV 879
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+++E P ++SY +I G C G D A SL ++ ++ + L++
Sbjct: 880 TDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKA 939
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
G +D LL M C + SY+ + + A G
Sbjct: 940 GHVDFCSQLLAAMDNRHCRIDSESYSMLTDSIREASG 976
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 179/377 (47%), Gaps = 42/377 (11%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
++DF S+L+ A I+ + Q + + L + N LL R + + LA F
Sbjct: 81 IADF--SRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+++K PD+ T+ +++ G+C+ I +A +FD M +PN++ YNT+I+G C
Sbjct: 139 LGKMMKLGH-EPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLC 197
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD------------------- 278
K +++ A +N M G RP+ +TYN++I GLC +GR D
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVF 257
Query: 279 ----------------EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
EA+ L +M ++ T+ ++ GLC+ + D+A +
Sbjct: 258 TFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFM 317
Query: 323 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
+ PDV +Y ++ING+CK K + + L EM RG+ ++ + + G+L
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKL 377
Query: 383 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 442
+ A + K M PN ++YN ++ GLC G+++ ++ M +SG + D Y+
Sbjct: 378 NVAEEIFKWMVFCGVPPNIITYNVLLHGLC-DNGKIEKALVILADMQKSGMDADIVTYNI 436
Query: 443 LLKGYCEEGNVENVMQI 459
+++G C+ G V + +
Sbjct: 437 IIRGMCKAGEVADAWDL 453
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 169/321 (52%), Gaps = 7/321 (2%)
Query: 134 GDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
GDR + A++ F + ++ + YN+++ L + + A + +++ + + + PD
Sbjct: 164 GDR--IYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRM-EVDGIRPD 220
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMN 250
TY ++I G C G ++A ++ MT + P++ +N +I+ K+G + EA++
Sbjct: 221 AVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYE 280
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
EM+ R P+ +TY+ +IYGLC+ R+DEA+ + M G +V T+ ++ G C
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
K + + + + + + +Y V+I G+C+ GK + A + K M G+ P + ++N
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYN 400
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ L +NG++++A+++L M + + V+YN II G+C A G + D DL +
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKA-GEVADAWDLYCSLNL 459
Query: 431 SGHNLDFTMYSCLLKGYCEEG 451
G D Y+ ++ G ++G
Sbjct: 460 KGLTPDIWTYTAMMLGLYKKG 480
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 138/246 (56%), Gaps = 4/246 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++N+L+ V+ I AEE + ++++ ++ PD+ TY+ +I G C ++ A+++F
Sbjct: 256 VFTFNALIDACVKEGRISEAEELYEEMIRRSL-DPDIVTYSLLIYGLCMYSRLDEAEQMF 314
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P+++ Y+ +ING+CK ++E K EM RG N +TY +I G C
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRA 374
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+++ A+ + M G N+ T+ +L GLC GK ++A+ L ++ ++ M+ D+ +Y
Sbjct: 375 GKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTY 434
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I G CK G+ +A L + +GL P ++++ A+ L + G A L ++M +
Sbjct: 435 NIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKE 494
Query: 395 MDCLPN 400
LPN
Sbjct: 495 DGILPN 500
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 148/290 (51%), Gaps = 6/290 (2%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
FFH + + P ++ ++ ++ KM + +++ M + NL N ++N F
Sbjct: 69 FFHMVQCRPL--PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C+ +L A + +MM G P+ +T+ +++ G C R+ +A + +M G++ NV
Sbjct: 127 CRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNV 186
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
+ +++ GLC + D A+ L + + PD +Y +I+G C G+ D+A ++
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSC 246
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M R + P VF+FNA+ V+ G + A L ++M + P+ V+Y+ +I GLCM
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYS- 305
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R+ + E + M+ G D YS L+ GYC+ VE+ M++ EM +
Sbjct: 306 RLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 129/275 (46%), Gaps = 4/275 (1%)
Query: 195 STYTTMIR-GYCKMGMIENAKKVFDVMTVKP--NLLAYNTMINGFCKKGELEEAKKCMNE 251
S Y M+R G M + ++ F ++ +P ++ ++ +++ K + + +
Sbjct: 47 SDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQ 106
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M G N T N ++ C ++ A + KM G + ++ T S+L G C +
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDR 166
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
A+ ++E P+V Y +I+G CK + D A+ LL M G++P ++N+
Sbjct: 167 IYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNS 226
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L +G D A ++ M + + P+ ++N +I C+ +GR+ + E+L + MIR
Sbjct: 227 LISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALI-DACVKEGRISEAEELYEEMIRR 285
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ D YS L+ G C ++ Q+ MV+K
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSK 320
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+++ +L + + K+D + + + ++ + +++N FC+ + A+S L
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
+M G +P + +F ++ + A+ + +M +M PN V YNTII GLC +
Sbjct: 140 GKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKS 199
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
K ++ + DL++RM G D Y+ L+ G C G ++ ++ M ++
Sbjct: 200 K-QVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKRE 251
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 129 LIKAYGDRG--NVKAAIF-WFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI+ Y G NV IF W N + +YN LL L I+ A +
Sbjct: 367 LIQGYCRAGKLNVAEEIFKWMVFCGVPPN---IITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
K + D+ TY +IRG CK G + +A ++ + +K P++ Y M+ G KKG
Sbjct: 424 KSGM-DADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLR 482
Query: 243 EEAKKCMNEMMNRGCRPNE 261
EA +M G PNE
Sbjct: 483 GEADALFRKMKEDGILPNE 501
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 166/308 (53%), Gaps = 4/308 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
SY +++G L + IK +++K++ + PD TY T + K G + A +
Sbjct: 276 SYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLRE 335
Query: 218 -DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ + + + Y+ +++ FC++G +++AK+ +NEM ++GC P+ +TY ++I GLC +
Sbjct: 336 AEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERK 395
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+AK ++ +M +G K N ++ ++L GLC G +A + E P+ +Y V
Sbjct: 396 VDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSV 455
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++GF + GKS EA L++EM +G PT N + + L + ++D A ++Q
Sbjct: 456 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C N V++ T+I G C K ++ L+D M S + D Y+ ++ ++G +E
Sbjct: 516 CAVNVVNFTTVIHGFC-QKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEA 574
Query: 457 MQIAHEMV 464
++A +M+
Sbjct: 575 TKLAMKML 582
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 199/452 (44%), Gaps = 47/452 (10%)
Query: 20 LVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWAS 79
LV I +I+ + NP + L L V V+ QT+ AL FF WA
Sbjct: 70 LVREICRLIELRSAWNPKLEG----ELRHLLRSLKPRQVCAVLQLQTDERVALRFFYWAD 125
Query: 80 NPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNV 139
+Y H Y A+ ++L L A +L+ K I + +A+G
Sbjct: 126 RQW----RYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRR---IERRPEAFG----- 173
Query: 140 KAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTT 199
+ + +A ++ N + ++++ + PD+S T
Sbjct: 174 -YVMVSYSRAGKLRNAMRXLT-----------------------MMQKAGIEPDLSICNT 209
Query: 200 MIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
I ++ A + + M + PN++ YN +I G+C LE+A + + EM +G
Sbjct: 210 AIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKG 269
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKM--RLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
C P++++Y ++ LC R+ E ++LM KM N D V T+ + + L G D+
Sbjct: 270 CSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQV-TYNTFVHMLSKHGHGDE 328
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+ +LR E D Y +++ FC+ G+ D+A ++ EM ++G P V ++ +V
Sbjct: 329 ALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVIN 388
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L + ++D+A +L+QM + C PN VSY ++ GLC G + ++++
Sbjct: 389 GLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLC-KNGNSLEAREMMNMSEEXWWI 447
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ YS L+ G+ EG + EM+ K
Sbjct: 448 PNAITYSVLMHGFRREGKSSEACDLVREMIKK 479
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 174/354 (49%), Gaps = 8/354 (2%)
Query: 110 IAASLLKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
+ +LK+SN L D + + G+ A+ + +A++ Y++++
Sbjct: 296 LMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSF 355
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPN 225
R + A+E +++ + +P DV TYT++I G C+ ++ AKK+ M KPN
Sbjct: 356 CREGRMDKAKEIVNEMFSKGCIP-DVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPN 414
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++Y ++NG CK G EA++ MN PN +TY+ +++G G+ EA L+
Sbjct: 415 TVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVR 474
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M GF +++ LC K D+A ++ + +V ++ VI+GFC+
Sbjct: 475 EMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKD 534
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ A+SLL +M P V ++ + L + G ++ A L +M ++ +P V+Y
Sbjct: 535 DLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYR 594
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
T+I C GR++D+ L+++M+ T Y+ +++ C GN+E ++
Sbjct: 595 TVIHQYCRM-GRVEDLLKLLEKMLSRQECR--TAYNQVIEKLCSFGNLEQAYKL 645
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 109/232 (46%), Gaps = 9/232 (3%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N L+ L + + A+ F Q + N +V +TT+I G+C+ +E A + D M
Sbjct: 489 NLLIQSLCQEEKVDEAKRFMEQCLN-NGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 547
Query: 222 VK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ P+++ Y T+I+ KKG +EEA K +M+ G P +TY +I+ C GRV+
Sbjct: 548 LSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVE 607
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+ L+ KM ++ + + +++ LC G +QA L V+ D + ++I
Sbjct: 608 DLLKLLEKML--SRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLI 665
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG---ELDRAIL 387
+ G + ++ M R L P + V + L+ G E D+ IL
Sbjct: 666 ESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLIL 717
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I + + +++AA+ + +Y +++ L + I+ A + ++++
Sbjct: 524 TTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLR 583
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNL-LAYNTMINGFCKKGELEEA 245
+P V TY T+I YC+MG +E+ K+ + M + AYN +I C G LE+A
Sbjct: 584 VGWIPTPV-TYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQA 642
Query: 246 KKCMNEMMNRGCRPNELTYNAMI 268
K + +++ + + T + +I
Sbjct: 643 YKLLGKVLRTASKIDANTCHMLI 665
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 171/366 (46%), Gaps = 55/366 (15%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIV---------KENVV---------PPDVSTYTTMI 201
+YN+LL + + AE F++I+ K N V P + TYTT+I
Sbjct: 269 TYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLI 328
Query: 202 RGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
YCK +E + ++ M + P+++ ++++ GFC+ G+L EA EM G
Sbjct: 329 AAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLD 388
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
PN ++Y +I L +GRV EA L ++M + G ++ T +++ GL VGK +A
Sbjct: 389 PNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEV 448
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+++ N+ P+ +Y +++G+CK+GK + A +L++M + P V +F+++ +
Sbjct: 449 FETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAK 508
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK----------------------- 415
G L +A+ +L++M Q + +PN + Y +I G A
Sbjct: 509 KGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVI 568
Query: 416 -----------GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
GRM + L+ M G + D Y+ L+ GY +EGN + I EM
Sbjct: 569 FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMK 628
Query: 465 TKKGRL 470
K R
Sbjct: 629 EKNIRF 634
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 40/342 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++LL ++ ++LAE ++ KE+ VPP+V T++++I GY K GM+ A V
Sbjct: 463 TYSALLDGYCKLGKMELAELVLQKMEKEH-VPPNVITFSSIINGYAKKGMLSKAVDVLRE 521
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V PN + Y +I+G+ K GE + A EM +R + + ++ ++ L GR
Sbjct: 522 MVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGR 581
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+DEA+ L+ M G ++ + S++ G G A+ ++ + E N+ DV +Y
Sbjct: 582 MDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNA 641
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G ++GK D + M GL P ++N + G+ + A+ +L +M
Sbjct: 642 LIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYG 700
Query: 397 CLPNFVSYNTIICGLC----------------------MAKGRMQDVEDLV--------- 425
+PN V+YN +I GLC A +Q E LV
Sbjct: 701 IMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQ 760
Query: 426 ----DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D M++ G + D Y+ L++GYC +VE ++ +M
Sbjct: 761 KVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQM 802
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 150/327 (45%), Gaps = 45/327 (13%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI Y GN AA+ + K+ + +YN+L+ L+R+ K + +
Sbjct: 605 ASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLG--KYDPRYVCSRMI 662
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG--- 240
E + PD TY T+I YC G E+A + + M + PN + YN +I G CK G
Sbjct: 663 ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVP 722
Query: 241 ---------------------------------ELEEAKKCMNEMMNRGCRPNELTYNAM 267
EL+ K ++EM+ RG + +TYNA+
Sbjct: 723 TPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNAL 782
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG----KFDQAVGYLRNVM 323
I G C V++A ++M ++G N++T+ ++L GL G ++ + +
Sbjct: 783 IRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMN 842
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
E + P+ +Y+++++G+ ++G + I L EM +G PT+ ++N + ++G++
Sbjct: 843 ERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMI 902
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICG 410
A LL + +PN +Y+ + CG
Sbjct: 903 EARELLNDLLTKGRIPNSFTYDILTCG 929
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 199/456 (43%), Gaps = 105/456 (23%)
Query: 107 LISIAASLLKNSNKLSDFFI-----SKLIKAYGDRGNVKAAI--------FWFHQAK--- 150
L+S A L++NS + SD I + L+KA+ G++ A FW + +
Sbjct: 247 LMSQATELIENSWR-SDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKN 305
Query: 151 -------QIEN-GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+I+N L +Y +L+ + ++ + + +++ N + PDV T ++++
Sbjct: 306 NDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIM-NGIMPDVVTCSSILY 364
Query: 203 GYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR- 258
G+C+ G + A +F M + PN ++Y T+IN K G + EA ++M+ RG
Sbjct: 365 GFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISF 424
Query: 259 ----------------------------------PNELTYNAMIYGLCINGRVDEAKMLM 284
PN +TY+A++ G C G+++ A++++
Sbjct: 425 DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 484
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
KM NV T S++ G G +AV LR +++ N+ P+ Y ++I+G+ K
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCLPN 400
G+ D A KEM++R L+ + N +F IL+ N G +D A L+ M P+
Sbjct: 545 GEQDVADDFCKEMKSRRLEES----NVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPD 600
Query: 401 FVSYNTIICGL-----------------------------CMAKGRMQ----DVEDLVDR 427
V+Y ++I G + KG ++ D + R
Sbjct: 601 IVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSR 660
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
MI G D Y+ ++ YC +G E+ + I +EM
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEM 696
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 178/432 (41%), Gaps = 92/432 (21%)
Query: 85 PNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIF 144
P K H + + + L+H S A++ + L G V F
Sbjct: 52 PTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRAL---------------GLVPTLPF 96
Query: 145 WFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
W LY +N+ LV + ++ F +V PDV + ++
Sbjct: 97 W---------NTLLYQFNA--SGLVSQVKLMYSDMLFCGVV------PDVFSVNVLVHSL 139
Query: 205 CKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNE 261
CK+G ++ A DV+ + + YNT+I GFC+KG +++ ++EM+ RG +
Sbjct: 140 CKVGDLDLALGYLRNNDVVDIDN--VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDS 197
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKM--------------RLNGF--------------- 292
+T N ++ G C G V A+ +M + ++G+
Sbjct: 198 ITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIEN 257
Query: 293 ------KDNVSTHKSMLKGLCVVGK-------FDQAVGYLRNVME------------ANM 327
K ++ T+ ++LK C G F++ +G+ ++ N+
Sbjct: 258 SWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNL 317
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P + +Y +I +CK +E+ SL K+M G+ P V + +++ +G+L A +
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV 377
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L ++M +M PN VSY TII L GR+ + +L +M+ G + D + ++ G
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSL-FKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGL 436
Query: 448 CEEGNVENVMQI 459
+ G + ++
Sbjct: 437 FKVGKTKEAEEV 448
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 161/378 (42%), Gaps = 77/378 (20%)
Query: 175 KLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG----------MIENAKKVFDVMTVKP 224
+LA Q +KE + DV Y +I+G ++G MIE + + P
Sbjct: 617 QLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIE--------LGLAP 668
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING--------- 275
+ + YNT+IN +C KG+ E+A +NEM + G PN +TYN +I GLC G
Sbjct: 669 DCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHK 728
Query: 276 -------RVDEA--------------------KMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
R ++A K+++ +M G ++ T+ ++++G C
Sbjct: 729 FLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCT 788
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG----KSDEAISLLKEMRARGLKP 364
++A+ + + P++ +Y ++ G G +E L+ EM RGL P
Sbjct: 789 GSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVP 848
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
+++ + G + I+L +M +P +YN +I + G+M + +L
Sbjct: 849 NAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKS-GKMIEAREL 907
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCE---EGNVENVMQIAHEM---------------VTK 466
++ ++ G + Y L G+ E ++ ++ ++E+ +K
Sbjct: 908 LNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGLKFSK 967
Query: 467 KGRLLKLKNFLTRVVDAL 484
K + +LK F +VDAL
Sbjct: 968 KAEIRRLKIFPHWMVDAL 985
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 166/308 (53%), Gaps = 4/308 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
SY +++G L + IK +++K++ + PD TY T + K G + A +
Sbjct: 276 SYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLRE 335
Query: 218 -DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ + + + Y+ +++ FC++G +++AK+ +NEM ++GC P+ +TY ++I GLC +
Sbjct: 336 AEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERK 395
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+AK ++ +M +G K N ++ ++L GLC G +A + E P+ +Y V
Sbjct: 396 VDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSV 455
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++GF + GKS EA L++EM +G PT N + + L + ++D A ++Q
Sbjct: 456 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C N V++ T+I G C K ++ L+D M S + D Y+ ++ ++G +E
Sbjct: 516 CAVNVVNFTTVIHGFC-QKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEA 574
Query: 457 MQIAHEMV 464
++A +M+
Sbjct: 575 TKLAMKML 582
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 203/452 (44%), Gaps = 47/452 (10%)
Query: 20 LVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWAS 79
LV I +I+ + NP + L L V V+ QT+ AL FF WA
Sbjct: 70 LVREICRLIELRSAWNPKLEG----ELRHLLRSLKPRQVCAVLQLQTDERVALRFFYWAD 125
Query: 80 NPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNV 139
+Y H Y A+ ++L L A +L+ K I + +A+G
Sbjct: 126 RQW----RYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRR---IERRPEAFG----- 173
Query: 140 KAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTT 199
+ + +A ++ N +RV ++ +++ + PD+S T
Sbjct: 174 -YVMVSYSRAGKLRNA-------------MRVLTM----------MQKAGIEPDLSICNT 209
Query: 200 MIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
I ++ A + + M + +PN++ YN +I G+C LE+A + + EM +G
Sbjct: 210 AIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKG 269
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKM--RLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
C P++++Y ++ LC R+ E ++LM KM N D V T+ + + L G D+
Sbjct: 270 CSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQV-TYNTFVHMLSKHGHGDE 328
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
A+ +LR E D Y +++ FC+ G+ D+A ++ EM ++G P V ++ +V
Sbjct: 329 ALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVIN 388
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L + ++D+A +L+QM + C PN VSY ++ GLC G + ++++
Sbjct: 389 GLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLC-KNGNSLEAREMMNMSEEDWWI 447
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ YS L+ G+ EG + EM+ K
Sbjct: 448 PNAITYSVLMHGFRREGKSSEACDLVREMIKK 479
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 174/354 (49%), Gaps = 8/354 (2%)
Query: 110 IAASLLKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVL 168
+ +LK+SN L D + + G+ A+ + +A++ Y++++
Sbjct: 296 LMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSF 355
Query: 169 VRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPN 225
R + A+E +++ + +P DV TYT++I G C+ ++ AKK+ M KPN
Sbjct: 356 CREGRMDKAKEIVNEMFSKGCIP-DVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPN 414
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
++Y ++NG CK G EA++ MN PN +TY+ +++G G+ EA L+
Sbjct: 415 TVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVR 474
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
+M GF +++ LC K D+A ++ + +V ++ VI+GFC+
Sbjct: 475 EMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKD 534
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ A+SLL +M P V ++ + L + G ++ A L +M ++ +P V+Y
Sbjct: 535 DLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYR 594
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
T+I C GR++D+ L+++M+ T Y+ +++ C GN+E ++
Sbjct: 595 TVIHQYCRM-GRVEDLLKLLEKMLSRQECR--TAYNQVIEKLCSFGNLEQAYKL 645
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 109/232 (46%), Gaps = 9/232 (3%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N L+ L + + A+ F Q + N +V +TT+I G+C+ +E A + D M
Sbjct: 489 NLLIQSLCQEEKVDEAKRFMEQCLN-NGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 547
Query: 222 VK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ P+++ Y T+I+ KKG +EEA K +M+ G P +TY +I+ C GRV+
Sbjct: 548 LSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVE 607
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+ L+ KM ++ + + +++ LC G +QA L V+ D + ++I
Sbjct: 608 DLLKLLEKML--SRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLI 665
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG---ELDRAIL 387
+ G + ++ M R L P + V + L+ G E D+ IL
Sbjct: 666 ESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLIL 717
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I + + +++AA+ + +Y +++ L + I+ A + ++++
Sbjct: 524 TTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLR 583
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNL-LAYNTMINGFCKKGELEEA 245
++P V TY T+I YC+MG +E+ K+ + M + AYN +I C G LE+A
Sbjct: 584 VGLIPTPV-TYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQA 642
Query: 246 KKCMNEMMNRGCRPNELTYNAMI 268
K + +++ + + T + +I
Sbjct: 643 YKLLGKVLRTASKIDANTCHMLI 665
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 179/371 (48%), Gaps = 12/371 (3%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F S ++K D + A+ F + E GAC + +YN+++ + A
Sbjct: 229 FSYSIILKGLCDNSMSQRALDLFQMMAK-EGGACSPNVVAYNTVIHGFFKEGETGKACSL 287
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
FH++ ++ V PDV TY +I CK ++ A+ V MT +P+ + YN MI+G+
Sbjct: 288 FHEMTRQGV-KPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYA 346
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G L+EA K +M +RG PN + N+ + LC +GR EA + M G K ++
Sbjct: 347 TLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIV 406
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
++ ++L G G F +G ++ + D + + ++I+ + K G D+A+ + EM
Sbjct: 407 SYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM 466
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ +G+ P V +++ V G L A+ QM PN Y++II G CM G
Sbjct: 467 QQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGL 526
Query: 418 MQDVEDLVDRMIRSG-HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
++ ++LV MI G D ++ ++ C++G V + I ++VT G + F
Sbjct: 527 VK-AKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDI-FDLVTDIGERPDVITF 584
Query: 477 LTRVVDALLLM 487
T ++D L+
Sbjct: 585 -TSLIDGYCLV 594
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 189/393 (48%), Gaps = 24/393 (6%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY RG V A+ F + +Q + +Y++++ R+ + A E F+Q+V
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG 505
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMINGFCKKGELEE 244
+ P+ + Y ++I+G+C G + AK++ M K P+++ +N++IN CK G + +
Sbjct: 506 I-QPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMD 564
Query: 245 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLK 304
A + + + G RP+ +T+ ++I G C+ G++D+A ++ M + G + ++ T+ ++L
Sbjct: 565 AHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLD 624
Query: 305 GLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 364
G G+ + + R + + P+ +Y +++ G + G++ A EM G
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV 684
Query: 365 TVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDL 424
TV + + L N D AI+L +++ M+ + NT+I + + R ++ ++L
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQ-RKEEAKEL 743
Query: 425 VDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH------------------EMVTK 466
+ SG + + Y ++ ++G VE+ + M+ +
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLE 803
Query: 467 KGRLLKLKNFLTRVVDALLLMWIVTGGSWISRF 499
KG + K N+L++V +L+ T +S F
Sbjct: 804 KGEIAKAGNYLSKVDGKRILLEASTTSLMLSLF 836
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 144/336 (42%), Gaps = 23/336 (6%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIK--------LAEEFFHQIVKEN----VVPPD 193
F QA + S N L L R S LA F+++ +E VVP
Sbjct: 101 FRQATPVPG----RSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGPRVVPLT 156
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCM- 249
V TY+ ++ C+ + +F + +K + + +T++ C EEA +
Sbjct: 157 VHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLL 216
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNG--FKDNVSTHKSMLKGLC 307
+ M GC PN +Y+ ++ GLC N A L M G NV + +++ G
Sbjct: 217 HRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFF 276
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
G+ +A + + PDV +Y ++I+ CK D+A +L++M G +P
Sbjct: 277 KEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTV 336
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
++N + G L A + ++M +PN V N+ + LC GR ++ ++ D
Sbjct: 337 TYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLC-KHGRSKEAAEIFDS 395
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
M GH D Y LL GY EG +++ + + M
Sbjct: 396 MTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSM 431
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 4/231 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ Y G + + F + ++ +Y +L L R A + FH+++
Sbjct: 620 STLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMI- 678
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELE 243
E+ VS Y ++ G C+ + A +F M VK ++ NTMIN K E
Sbjct: 679 ESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKE 738
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EAK+ + G PNE TY MI L +G V++A + + M +G ++
Sbjct: 739 EAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRII 798
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+ L G+ +A YL V + + + ++++ F + GK E + LL
Sbjct: 799 RMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP-----DVKSYEVVINGFCK 343
LNGF ++ S C+ A+ V P V +Y ++++ C+
Sbjct: 112 LNGFLTALARATS--SSACITDGPALALALFNRVCREQAGPRVVPLTVHTYSILMDCCCR 169
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI-LLLKQMPQMDCLPNFV 402
+ D + L + GLK + + + + L + A+ +LL +M ++ C+PN
Sbjct: 170 ARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVF 229
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGH--NLDFTMYSCLLKGYCEEGNVENVMQIA 460
SY+ I+ GLC Q DL M + G + + Y+ ++ G+ +EG +
Sbjct: 230 SYSIILKGLC-DNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLF 288
Query: 461 HEMVTKKG 468
HEM T++G
Sbjct: 289 HEM-TRQG 295
>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
Length = 375
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 144/275 (52%), Gaps = 5/275 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKC 248
P+ TY +I C+ G ++ A+++ + + + KPN + YNT++ GFC +A +
Sbjct: 8 PNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIERWVDANEI 67
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++E+++ C PNE T N I LC G + + + KM +G NV T+ +++ GLC
Sbjct: 68 LDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIGGLCE 127
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G D A+ L N+ PD+ +Y V+ G C + ++A L+ +M +
Sbjct: 128 QGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLRDNST 187
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
FN + + G + +A+ + KQMP+ C PN +Y+TII GL A +M+ +L++ M
Sbjct: 188 FNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKA-SKMEQALELLNEM 246
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G N D MY L K +E +E V+Q+ H++
Sbjct: 247 ANKGFNTD-KMYLVLTKSLNKEDKIEEVVQVVHKL 280
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 143/306 (46%), Gaps = 39/306 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L + A E ++V EN PP+ +T I C+ G+++ + +
Sbjct: 47 NYNTVLKGFCSIERWVDANEILDEVVSENC-PPNEATLNVTINTLCRKGLLQKVTRYLEK 105
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ N++ YN +I G C++G ++ A + ++ M + GC+P+ +TYN ++ GLC R
Sbjct: 106 MSKHGCTTNVVTYNAIIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADR 165
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++A+ LM KM N + ST +++ C G QA+ + + E NP+ +Y
Sbjct: 166 WEDAEELMIKMSQNDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYST 225
Query: 337 VINGFCKIGKSDEAISLLKEMRARG----------------------------------L 362
+I G K K ++A+ LL EM +G +
Sbjct: 226 IIGGLVKASKMEQALELLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVHKLQDSGI 285
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P +N V L NG+ + AI +L M C+P+ +Y +I GL +G +++
Sbjct: 286 SPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGL-FYEGYLKEAR 344
Query: 423 DLVDRM 428
+L+ R+
Sbjct: 345 ELLSRL 350
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 113/215 (52%), Gaps = 1/215 (0%)
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M GC PN +TYN +I +C G VD+A+ L+ + K N + ++LKG C + +
Sbjct: 1 MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
+ A L V+ N P+ + V IN C+ G + L++M G V ++NA
Sbjct: 61 WVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNA 120
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ L E G +D A+ LL M C P+ V+YNT++ GLC A R +D E+L+ +M ++
Sbjct: 121 IIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSAD-RWEDAEELMIKMSQN 179
Query: 432 GHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D + ++ ++ +C++G + +++ +M K
Sbjct: 180 DRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEK 214
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 123/244 (50%), Gaps = 5/244 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+++G L ++ A E + + PD+ TY T+++G C E+A+++
Sbjct: 117 TYNAIIGGLCEQGNVDSALELLSNM-QSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIK 175
Query: 220 MTVKPNLL---AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M+ L +NT+I+ +C+KG + +A + +M +GC PN TY+ +I GL +
Sbjct: 176 MSQNDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASK 235
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+++A L+ +M GF + + + K L K ++ V + + ++ ++P Y
Sbjct: 236 MEQALELLNEMANKGFNTD-KMYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNT 294
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
V+ G C+ GK++ AI +L +M + G P ++ + L G L A LL ++ D
Sbjct: 295 VLLGLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLKEARELLSRLCSRD 354
Query: 397 CLPN 400
L N
Sbjct: 355 VLSN 358
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I ++GNV +A+ + + +YN++L L + + AEE ++ +N
Sbjct: 121 IIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKM-SQN 179
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
D ST+ T+I +C+ G+I A +VF M K PN Y+T+I G K ++E+A
Sbjct: 180 DRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQA 239
Query: 246 KKCMNEMMNRG----------------------------------CRPNELTYNAMIYGL 271
+ +NEM N+G P + YN ++ GL
Sbjct: 240 LELLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGL 299
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
C NG+ + A ++A M G + ST+ +++GL G +A
Sbjct: 300 CRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLKEA 343
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I + +G + A+ F Q + +Y++++G LV+ + ++ A E +++ +
Sbjct: 191 IISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALELLNEMANKG 250
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ Y + + K IE +V + + P + YNT++ G C+ G+ A
Sbjct: 251 FNTDKM--YLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTNYA 308
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+ +M++ GC P+E TY +I GL G + EA+ L++++
Sbjct: 309 IDVLADMVSCGCMPDESTYIILIEGLFYEGYLKEARELLSRL 350
>gi|212275248|ref|NP_001130560.1| uncharacterized protein LOC100191659 [Zea mays]
gi|194689480|gb|ACF78824.1| unknown [Zea mays]
Length = 558
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 148/287 (51%), Gaps = 16/287 (5%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
VS Y ++ + G A +F M V P+ ++ T + C++G +EAK ++EM+
Sbjct: 145 VSDYNDILSALARAGDHATAVALFRAMPVAPDAHSFATAVQCLCRQGAPDEAKLALDEMV 204
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG RP+ T++A++ LC GRV +A ++ M G + + T+ S++ GLC VG+ +
Sbjct: 205 ARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMLGLGCEPTIRTYNSLVGGLCYVGRLE 264
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ L+ + ++ + PD+ ++ +V++GFCK+G+++EA ++ + GL PT F++NA+
Sbjct: 265 EALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTTFTYNALL 324
Query: 374 RILVENGELDRAILLLKQM---PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ G +A LL +M CLP+ S+ ++ L A G RM R
Sbjct: 325 NGHCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTALLRA-GETSAAWQTYKRMER 383
Query: 431 SGHNLDFTMYSCLLKGYCEE--------GNVEN----VMQIAHEMVT 465
+G +D L +G C G+ E V+ HE V+
Sbjct: 384 AGFEVDGRALDTLARGLCRRCATDASALGDAEEVFGKVVASGHEPVS 430
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 158/334 (47%), Gaps = 16/334 (4%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN +L L R A F + V PD ++ T ++ C+ G + AK D M
Sbjct: 148 YNDILSALARAGDHATAVALFRAMP----VAPDAHSFATAVQCLCRQGAPDEAKLALDEM 203
Query: 221 TV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+P++ ++ ++ CK+G + +A + ++ M+ GC P TYN+++ GLC GR+
Sbjct: 204 VARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMLGLGCEPTIRTYNSLVGGLCYVGRL 263
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA L+ K++ + ++ T +L G C VG+ ++A + + ++P +Y +
Sbjct: 264 EEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTTFTYNAL 323
Query: 338 INGFCKIGKSDEAISLLKEM---RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+NG CK G +A +LL EM P SF V L+ GE A K+M +
Sbjct: 324 LNGHCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTALLRAGETSAAWQTYKRMER 383
Query: 395 MDCLPNFVSYNTIICGLC----MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+ + +T+ GLC + D E++ +++ SGH Y + +
Sbjct: 384 AGFEVDGRALDTLARGLCRRCATDASALGDAEEVFGKVVASGHEPVSYTYCLMAQALARG 443
Query: 451 GNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
G V+ + + +MV +KG L+ + + T VV AL
Sbjct: 444 GEVDAAVALLEDMV-RKGYALRKRAY-TDVVRAL 475
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 136/290 (46%), Gaps = 20/290 (6%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ +YNSL+G L V ++ A E ++ K++ + PD+ T+T ++ G+CK+G E A +F
Sbjct: 247 IRTYNSLVGGLCYVGRLEEALELLKKL-KDSPLTPDIYTFTIVLDGFCKVGRTEEATAIF 305
Query: 218 D---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM---NRGCRPNELTYNAMIYGL 271
M + P YN ++NG CK+G +A + EM + C P++ ++ ++ L
Sbjct: 306 HDAIGMGLSPTTFTYNALLNGHCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTAL 365
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC--------VVGKFDQAVGYLRNVM 323
G A +M GF+ + ++ +GLC +G ++ G V+
Sbjct: 366 LRAGETSAAWQTYKRMERAGFEVDGRALDTLARGLCRRCATDASALGDAEEVFG---KVV 422
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ P +Y ++ + G+ D A++LL++M +G ++ V R L + G
Sbjct: 423 ASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRKGYALRKRAYTDVVRALCDRGRAR 482
Query: 384 RAI-LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
A+ +L+ M D +P ++ ++ G +GR D + ++ G
Sbjct: 483 DALQVLVLVMIVRDFVPGRNAFEALL-GELSRQGRWADAMTVYAAAVKRG 531
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
VS + +L L G AV R + A PD S+ + C+ G DEA L
Sbjct: 144 TVSDYNDILSALARAGDHATAVALFRAMPVA---PDAHSFATAVQCLCRQGAPDEAKLAL 200
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
EM ARG +P+V +F+AV L + G + +A+ +L M + C P +YN+++ GLC
Sbjct: 201 DEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMLGLGCEPTIRTYNSLVGGLCYV 260
Query: 415 KGRMQDVEDLVDRMIRSGHNLD---FTM-------------------------------- 439
GR+++ +L+ ++ S D FT+
Sbjct: 261 -GRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTTFT 319
Query: 440 YSCLLKGYCEEGNVENVMQIAHEM 463
Y+ LL G+C+EGN + EM
Sbjct: 320 YNALLNGHCKEGNPLKAFALLMEM 343
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 216/496 (43%), Gaps = 75/496 (15%)
Query: 37 SPKNISSQPLDQFSLCLGSNI----VTKVIYEQTNPYHALFFFNWAS-NPNPNPNKYHHT 91
S +S Q + L SN + + Q + AL +WAS PN PN
Sbjct: 32 SNSTLSFASTQQHTATLSSNFTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPN----- 86
Query: 92 TPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISK-----LIKAYGDRGNVKAAIFWF 146
+ Y I L + +L+ L D I + I +Y + + I
Sbjct: 87 SSIYEEILRKLGKVGSFNSMKDILQEMKGL-DCQIDRGVLLIFIDSYA-KFELYEEILCI 144
Query: 147 HQAKQIENGACLYS--YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGY 204
+ ++E G L + YN LL VLV N +KL E +V + + PDVST+ +I+
Sbjct: 145 VEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGI-KPDVSTFNILIKAL 203
Query: 205 CKMGMIENAKKVFDVMT---VKPNLLAYNTMI---------------------------- 233
CK I A V + M+ + P+ + T++
Sbjct: 204 CKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTN 263
Query: 234 -------NGFCKKGELEEA-----------KKCM-----NEMMNRGCRPNELTYNAMIYG 270
+GFCK+G +EEA K M NEM N+GC+P+E TYN +I
Sbjct: 264 VTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDS 323
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC G++ EA L+ +M ++G NV T+ +++ G C K ++A + ++ +
Sbjct: 324 LCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRN 383
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+Y +I+G CK + EA L+ +M GLKP F++N++ G++ +A +++
Sbjct: 384 SVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQ 443
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
M C P+ V+Y T+I GLC A GR++ L+ + G L Y+ +++ +
Sbjct: 444 TMTSNGCEPDIVTYGTLIGGLCKA-GRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKR 502
Query: 451 GNVENVMQIAHEMVTK 466
+ M++ EM K
Sbjct: 503 KRTKEAMRLFREMEEK 518
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 143/276 (51%), Gaps = 4/276 (1%)
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTM 232
+A E ++++ K PD TY +I C G ++ A + M + N++ YNT+
Sbjct: 297 MAIELYNEM-KNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTL 355
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
I+GFCK ++EEA++ ++M +G N +TYN +I GLC + RV EA LM +M + G
Sbjct: 356 IDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGL 415
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
K + T+ SML C G +A ++ + PD+ +Y +I G CK G+ + A
Sbjct: 416 KPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASR 475
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
LL+ ++ +G+ T ++N V + L + A+ L ++M + P+ +Y + GL
Sbjct: 476 LLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLS 535
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+ G + + D V MI G +F+ + L +G C
Sbjct: 536 NSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC 571
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 179/383 (46%), Gaps = 23/383 (6%)
Query: 103 LSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS-Y 161
+S+S +S A++ + S+F ++L+ + + AA+ A + N S Y
Sbjct: 31 ISNSTLSFASTQQHTATLSSNFTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIY 90
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
+L L +V S ++ ++ K D I Y K + E + +VM
Sbjct: 91 EEILRKLGKVGSFNSMKDILQEM-KGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVME 149
Query: 222 VKPNL----LAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V+ L L YN ++N +L+ + + M+++G +P+ T+N +I LC ++
Sbjct: 150 VEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQI 209
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
A ++M +M G + T ++++G G D A +++A + V+
Sbjct: 210 RPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVL 269
Query: 338 INGFCKIGKSDEAIS----------------LLKEMRARGLKPTVFSFNAVFRILVENGE 381
++GFCK G+ +EA+S L EM+ +G +P F++N + L G+
Sbjct: 270 VHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGK 329
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
L A+ LL++M C N ++YNT+I G C K ++++ E++ D+M G + + Y+
Sbjct: 330 LQEALGLLREMEISGCARNVITYNTLIDGFCKNK-KIEEAEEIFDQMEIQGLSRNSVTYN 388
Query: 442 CLLKGYCEEGNVENVMQIAHEMV 464
L+ G C+ V+ Q+ +M+
Sbjct: 389 TLIDGLCKSRRVQEAAQLMDQMI 411
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 171/330 (51%), Gaps = 25/330 (7%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+NSLL LV+ A + E PPD TY T+ G+C+ +++ + D++
Sbjct: 178 FNSLLDALVKSRRASKAASLVRAL--EQRFPPDAVTYNTLADGWCR---VKDTSRALDIL 232
Query: 221 T------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-----CRPNELTYNAMIY 269
+ P YN ++ GF + G+L+ A +M RG C+P+ ++Y +++
Sbjct: 233 RQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLH 292
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
GL + G++D+A+ + +M + G K + +T+ ++++ C G + AV +++ P
Sbjct: 293 GLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIP 352
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+V +Y V+I G C GK A+ LL M++ G +P V ++N + R +E GE+++ + L
Sbjct: 353 NVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLF 412
Query: 390 KQMPQ-MDCLPNFVSYNTIICGLCMAKGRMQDV---EDLVDRMIRSGHNLDFTMYSCLLK 445
+ M + +CLPN +YN II + + K R +D+ +V M+ G+ M++ +L
Sbjct: 413 ETMSKGEECLPNQDTYNIIISAMFVRK-RAEDMAVAARMVVEMVDRGYLPRKFMFNRVLN 471
Query: 446 GYCEEGNVENVMQIAHEMVTKKGRLLKLKN 475
G GN E ++ E++ + + +L+
Sbjct: 472 GLMLTGNQE----LSRELLRMQEKYTRLRR 497
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 195/427 (45%), Gaps = 14/427 (3%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKA 141
+PN Y+ ++ VL++ L++ + + N ++ + LI + GN K
Sbjct: 295 HPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVT---FNALIDGHISEGNFKE 351
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ FH + SY LL L + LA F+ ++ K N V TYT MI
Sbjct: 352 ALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGRITYTGMI 410
Query: 202 RGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
G CK G ++ A + + M+ + P+++ Y+ +INGFC+ G L+ AK+ + + G
Sbjct: 411 DGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLS 470
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
PN + Y+ +IY C G + E + M L G + T ++ LC GK +A +
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
+R + + P+ S++ +ING+ G+ +A S+ EM G PT F++ ++ + L +
Sbjct: 531 MRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT 438
G L A LK + + + V NT+I +C + G + L M++ D
Sbjct: 591 GGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKS-GNLDKAVSLFGEMVQRSILPDSF 649
Query: 439 MYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISR 498
Y+ L+ G C +G + A E +G L+ K T VD + G W +
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKE-AEARGNLVPNKVMYTCFVDGMF-----KAGQWKAG 703
Query: 499 FVFVHQV 505
F F Q+
Sbjct: 704 FYFRQQM 710
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 162/402 (40%), Gaps = 110/402 (27%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ VL S K + Q ++++ P + TY T++ YCK G + A ++ D
Sbjct: 195 TFNILINVLCAEGSFK-KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253
Query: 220 MTVK--------------------------------------PNLLAYNTMINGFCKKGE 241
M +K PN + YNT++NGF +G+
Sbjct: 254 MNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGK 313
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMI--------------------------------- 268
+ A++ +NEM+ G PN +T+NA+I
Sbjct: 314 VLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGV 373
Query: 269 --YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
GLC N D A+ +M+ NG T+ M+ GLC G D+AV L + +
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDG 433
Query: 327 MNPDVKSYEVVINGFCKIGK-----------------------------------SDEAI 351
++PD+ +Y +INGFC++G+ E I
Sbjct: 434 IDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETI 493
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+ + M G P F+FN + L + G++ A ++ M LPN VS++ +I G
Sbjct: 494 RIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGY 553
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ G + D M + GH+ F Y LLKG C+ G++
Sbjct: 554 -GSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 146/326 (44%), Gaps = 5/326 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I Y G ++ + G L +YN LL + + + + ++
Sbjct: 725 MIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSG 784
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEA 245
++P ++ Y+ +I G C+ M+E K+ F V+ + +N +I+ C GE+ A
Sbjct: 785 ILPDKLTCYS-IILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWA 843
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+N M + G ++ T +A++ L N R E++M++ +M G + +L G
Sbjct: 844 FDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNG 903
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC VG A ++ + P + ++ K GK+DEA LL+ M L PT
Sbjct: 904 LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPT 963
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ SF + + +NG + A+ L M + VSYN +I GLC AKG M +L
Sbjct: 964 IASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLC-AKGDMAIAFELF 1022
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ M R G + T Y L+ G +G
Sbjct: 1023 EEMKRDGFLANVTTYKALVGGILSQG 1048
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 4/263 (1%)
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNE 251
S + +IR Y + GMI+++ ++F +M + P++ N ++ K E + E
Sbjct: 124 SVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKE 183
Query: 252 MMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGK 311
M+ R P+ T+N +I LC G ++ LM KM +G+ + T+ ++L C G+
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 312 FDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNA 371
F A+ L ++ +N DV +Y ++I+ C+ +S + LL++MR R + P ++N
Sbjct: 244 FKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 372 VFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS 431
+ G++ A LL +M PN V++N +I G +++G ++ + M
Sbjct: 304 LLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGH-ISEGNFKEALKMFHMMEAK 362
Query: 432 GHNLDFTMYSCLLKGYCEEGNVE 454
G Y LL G C+ +
Sbjct: 363 GLIGTEVSYGVLLDGLCKNAEFD 385
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 141/313 (45%), Gaps = 8/313 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+++N L+ L + + AEEF + + ++P VS + +I GY G A VFD
Sbjct: 509 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVS-FDCLINGYGSSGEGLKAFSVFD 567
Query: 219 VMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
MT P Y +++ G CK G L A+K + + N + + N +I +C +G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSG 627
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV-MEANMNPDVKSY 334
+D+A L +M + T+ S++ GLC GK A+ + + N+ P+ Y
Sbjct: 628 NLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMY 687
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++G K G+ ++M GL V + NA+ G++++ LL +M
Sbjct: 688 TCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGN 747
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD-FTMYSCLLKGYCEEGNV 453
+ PN +YN ++ G K + L MI SG D T YS +L G CE +
Sbjct: 748 QNQGPNLTTYNILLHGYSKRK-HVSTSFMLYRSMILSGILPDKLTCYSIIL-GICESNML 805
Query: 454 ENVMQIAHEMVTK 466
E ++I + +
Sbjct: 806 EIGLKILKAFICR 818
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 152/380 (40%), Gaps = 45/380 (11%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI YG G A F + ++ + ++Y SLL L + + AE+F +
Sbjct: 549 LINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQN-- 606
Query: 189 VVPPDVSTY--TTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
VP V T T+I CK G ++ A +F M ++ P+ Y ++I+G C+KG+
Sbjct: 607 -VPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTV 665
Query: 244 EAKKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
A E RG PN++ Y + G+ G+ +M G +V T +M
Sbjct: 666 IAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAM 725
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G +GK ++ L + N P++ +Y ++++G+ K + L + M G+
Sbjct: 726 IDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGI 785
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P + ++ + E+ L+ + +LK + ++N +I C A G +
Sbjct: 786 LPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCC-ANGEINWAF 844
Query: 423 DLVDRMIRSGHNLDFTM-----------------------------------YSCLLKGY 447
D+V+ M G +LD Y LL G
Sbjct: 845 DMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGL 904
Query: 448 CEEGNVENVMQIAHEMVTKK 467
C G+++ + EM+ K
Sbjct: 905 CRVGDIKTAFVVKEEMIAHK 924
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
N NP V ++++I + + G +++ + + M G P+V++ NA+ +V++ E
Sbjct: 120 NSNPSV--FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSV 177
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLK 445
LK+M + P+ ++N +I LC A+G + L+ +M +SG+ Y+ +L
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLC-AEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 446 GYCEEGNVENVMQIAHEM 463
YC++G + +++ M
Sbjct: 237 WYCKKGRFKAAIELLDHM 254
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,809,829,945
Number of Sequences: 23463169
Number of extensions: 309333123
Number of successful extensions: 923722
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7337
Number of HSP's successfully gapped in prelim test: 5241
Number of HSP's that attempted gapping in prelim test: 722476
Number of HSP's gapped (non-prelim): 64457
length of query: 526
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 379
effective length of database: 8,910,109,524
effective search space: 3376931509596
effective search space used: 3376931509596
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)