BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043068
(526 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 165/284 (58%), Gaps = 1/284 (0%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGEL 242
+I++ + PDV TY MI GYCK G I NA V D M+V P+++ YNT++ C G+L
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKL 220
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A + ++ M+ R C P+ +TY +I C + V A L+ +MR G +V T+ +
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ G+C G+ D+A+ +L ++ + P+V ++ +++ C G+ +A LL +M +G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P+V +FN + L G L RAI +L++MPQ C PN +SYN ++ G C K +M
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK-KMDRAI 399
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ ++RM+ G D Y+ +L C++G VE+ ++I +++ +K
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 168/306 (54%), Gaps = 5/306 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN++L L +K A E ++++ + P DV TYT +I C+ + +A K+ D
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP-DVITYTILIEATCRDSGVGHAMKLLDE 264
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+++ YN ++NG CK+G L+EA K +N+M + GC+PN +T+N ++ +C GR
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+A+ L+A M GF +V T ++ LC G +A+ L + + P+ SY
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++GFCK K D AI L+ M +RG P + ++N + L ++G+++ A+ +L Q+
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C P ++YNT+I GL A G+ L+D M D YS L+ G EG V+
Sbjct: 445 CSPVLITYNTVIDGLAKA-GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 457 MQIAHE 462
++ HE
Sbjct: 504 IKFFHE 509
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 167/310 (53%), Gaps = 5/310 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN L+ + + + A +F + + P+V T+ ++R C G +A+K+
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGC-QPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ +N +IN C+KG L A + +M GC+PN L+YN +++G C +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+D A + +M G ++ T+ +ML LC GK + AV L + +P + +Y
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G K GK+ +AI LL EMRA+ LKP +++++ L G++D AI + +M
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V++N+I+ GLC ++ + ++ LV MI G + T Y+ L++G EG +
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLV-FMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 457 MQIAHEMVTK 466
+++ +E+ K
Sbjct: 574 LELLNELCNK 583
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 138/266 (51%), Gaps = 7/266 (2%)
Query: 201 IRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
+R + G +E K + M P+++ T+I GFC+ G+ +A K + + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
P+ +TYN MI G C G ++ A ++ +M ++ +V T+ ++L+ LC GK QA+
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAME 225
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L +++ + PDV +Y ++I C+ A+ LL EMR RG P V ++N + +
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
+ G LD AI L MP C PN +++N I+ +C + GR D E L+ M+R G +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC-STGRWMDAEKLLADMLRKGFSPSV 344
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEM 463
++ L+ C +G + + I +M
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKM 370
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 113/206 (54%), Gaps = 4/206 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN LL + + A E+ ++V P D+ TY TM+ CK G +E+A ++ +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP-DIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
++ K P L+ YNT+I+G K G+ +A K ++EM + +P+ +TY++++ GL G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VDEA + G + N T S++ GLC + D+A+ +L ++ P+ SY +
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 337 VINGFCKIGKSDEAISLLKEMRARGL 362
+I G G + EA+ LL E+ +GL
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGL 585
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN----SIKLAEEFFHQI 184
++ A G V+ A+ +Q L +YN+++ L + +IKL +E +
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGE 241
+K PD TY++++ G + G ++ A K F + M ++PN + +N+++ G CK +
Sbjct: 480 LK-----PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+ A + M+NRGC+PNE +Y +I GL G EA L+ ++
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 39/133 (29%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S L+ G V AI +FH+ +++
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMG--------------------------------- 514
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ P+ T+ +++ G CK + A M KPN +Y +I G +G +
Sbjct: 515 ---IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 244 EAKKCMNEMMNRG 256
EA + +NE+ N+G
Sbjct: 572 EALELLNELCNKG 584
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/558 (25%), Positives = 250/558 (44%), Gaps = 113/558 (20%)
Query: 5 RRSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYE 64
RRSL+ + P S+L + ++R P + + F+ SN++ K
Sbjct: 9 RRSLSTFASSPSDSLLADKALTFLKR------HPYQLHHLSAN-FTPEAASNLLLK---S 58
Query: 65 QTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN--SNKLS 122
Q + L F NWA NP+++ T C +L L A L ++ + L
Sbjct: 59 QNDQALILKFLNWA-----NPHQFF-TLRCKCITLHILTKFKLYKTAQILAEDVAAKTLD 112
Query: 123 DFFISKL---------------------IKAYGDRGNVKAAIFWFHQAKQIENGACLYSY 161
D + S + +K+Y + A+ H A+ + SY
Sbjct: 113 DEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSY 172
Query: 162 NSLLGVLVRVN-SIKLAEEFFHQIVKENVVP----------------------------- 191
N++L +R +I AE F ++++ V P
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 232
Query: 192 -----PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
P+V TY T+I GYCK+ I++ K+ M +K PNL++YN +ING C++G ++
Sbjct: 233 TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK 292
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
E + EM RG +E+TYN +I G C G +A ++ A+M +G +V T+ S++
Sbjct: 293 EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352
Query: 304 KGLCVVGKFDQAV----------------------------GY-------LRNVMEANMN 328
+C G ++A+ GY LR + + +
Sbjct: 353 HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS 412
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P V +Y +ING C GK ++AI++L++M+ +GL P V S++ V + ++D A+ +
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
++M + P+ ++Y+++I G C + R ++ DL + M+R G D Y+ L+ YC
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQR-RTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 449 EEGNVENVMQIAHEMVTK 466
EG++E +Q+ +EMV K
Sbjct: 532 MEGDLEKALQLHNEMVEK 549
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 174/365 (47%), Gaps = 56/365 (15%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + + A ++++ + P V TYT++I CK G + A + D
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS-VITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V+ PN Y T+++GF +KG + EA + + EM + G P+ +TYNA+I G C+ G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+++A ++ M+ G +V ++ ++L G C D+A+ R ++E + PD +Y
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I GFC+ ++ EA L +EM GL P F++ A+ G+L++A+ L +M +
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 397 CLPNFVSYNTIICGL--------------------------------------------- 411
LP+ V+Y+ +I GL
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 412 -----CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
CM KG M + + + + M+ H D T Y+ ++ G+C G++ + EMV K
Sbjct: 611 LIKGFCM-KGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV-K 668
Query: 467 KGRLL 471
G LL
Sbjct: 669 SGFLL 673
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 178/434 (41%), Gaps = 94/434 (21%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENG--ACLYSYNSLLGVLVRVNSIKLAE 178
L + + LIK Y GN A+ A+ + +G + +Y SL+ + + ++ A
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVM--HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMING 235
EF Q+ + P + TYTT++ G+ + G + A +V M P+++ YN +ING
Sbjct: 366 EFLDQMRVRGLCPNE-RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 236 FCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
C G++E+A + +M +G P+ ++Y+ ++ G C + VDEA + +M G K +
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 355
T+ S+++G C + +A ++ + PD +Y +IN +C G ++A+ L
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 356 EMRARGLKPTVFSF-------------------------------NAVFRILVEN----- 379
EM +G+ P V ++ + + L+EN
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 380 --------------GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
G + A + + M + P+ +YN +I G C A G ++ L
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA-GDIRKAYTLY 663
Query: 426 DRMIRSGHNLDFTMYSCLLKGY-------------------CE----------------E 450
M++SG L L+K CE E
Sbjct: 664 KEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHRE 723
Query: 451 GNVENVMQIAHEMV 464
GN++ V+ + EM
Sbjct: 724 GNMDVVLDVLAEMA 737
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 167/363 (46%), Gaps = 30/363 (8%)
Query: 95 YTAITDVLLSHSLISIAASLLK--NSNKLSDFFIS--KLIKAYGDRGNVKAAIFWFHQAK 150
YT + D ++ A +L+ N N S ++ LI + G ++ AI K
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + SY+++L R + A ++V E + PD TY+++I+G+C+
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV-EKGIKPDTITYSSLIQGFCEQRRT 501
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A +++ M + P+ Y +IN +C +G+LE+A + NEM+ +G P+ +TY+ +
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 268 IYGLCINGRVDEAKMLMAKMRLN-GFKDNVSTHK--------------SMLKGLCVVGKF 312
I GL R EAK L+ K+ +V+ H S++KG C+ G
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+A +++ N PD +Y ++I+G C+ G +A +L KEM G + A+
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681
Query: 373 FRILVENG---ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ L + G EL+ I+ + + C + ++ + +G M V D++ M
Sbjct: 682 VKALHKEGKVNELNSVIVHVLR----SCELSEAEQAKVLVEINHREGNMDVVLDVLAEMA 737
Query: 430 RSG 432
+ G
Sbjct: 738 KDG 740
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 21/261 (8%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI+ + ++ K A + + ++ ++Y +L+ ++ A + +++V+
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAK----KVFDVMTVKPNLLAYNTMIN-------- 234
+ V+P DV TY+ +I G K AK K+F +V P+ + Y+T+I
Sbjct: 549 KGVLP-DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV-PSDVTYHTLIENCSNIEFK 606
Query: 235 -------GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
GFC KG + EA + M+ + +P+ YN MI+G C G + +A L +M
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+GF + T +++K L GK ++ + +V+ + + + +V++ + G
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNM 726
Query: 348 DEAISLLKEMRARGLKPTVFS 368
D + +L EM G P S
Sbjct: 727 DVVLDVLAEMAKDGFLPNGIS 747
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 174/345 (50%), Gaps = 38/345 (11%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP--------------------------- 191
Y Y S++G+L R+ + AEE F +++++ ++P
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 192 -------PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
PDV TYT +I G+C++G + A K+F M K P+ + + +ING+CK G
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
+++A + N M+ GC PN +TY +I GLC G +D A L+ +M G + N+ T+ S
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ GLC G ++AV + A +N D +Y +++ +CK G+ D+A +LKEM +G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
L+PT+ +FN + +G L+ LL M PN ++N+++ C+ + ++
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI-RNNLKAA 615
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ M G D Y L+KG+C+ N++ + EM K
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 162 bits (409), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 162/319 (50%), Gaps = 7/319 (2%)
Query: 153 ENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
E G C + SYN ++ + ++ IK A +++ PDV +Y+T++ GYC+ G +
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLL-LLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ K+ +VM +KPN Y ++I C+ +L EA++ +EM+ +G P+ + Y +
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C G + A +M +V T+ +++ G C +G +A + +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD ++ +ING+CK G +A + M G P V ++ + L + G+LD A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LL +M ++ PN +YN+I+ GLC + G +++ LV +G N D Y+ L+ Y
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKS-GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 448 CEEGNVENVMQIAHEMVTK 466
C+ G ++ +I EM+ K
Sbjct: 537 CKSGEMDKAQEILKEMLGK 555
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 141/270 (52%), Gaps = 4/270 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
++LI Y G++K A + Q + +Y +L+ L + + A E H++
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGEL 242
K + P++ TY +++ G CK G IE A K+ F+ + + + Y T+++ +CK GE+
Sbjct: 484 KIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A++ + EM+ +G +P +T+N ++ G C++G +++ + L+ M G N +T S+
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+K C+ A +++ + PD K+YE ++ G CK EA L +EM+ +G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQM 392
+V +++ + + ++ + A + QM
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 123/248 (49%), Gaps = 6/248 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI G++ +A H+ +I +++YNS++ L + +I+ A + +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ D TYTT++ YCK G ++ A+++ M ++P ++ +N ++NGFC G LE
Sbjct: 520 AGL-NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
+ +K +N M+ +G PN T+N+++ CI + A + M G + T+++++
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
KG C +A + + + V +Y V+I GF K K EA + +MR GL
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Query: 364 P--TVFSF 369
+F F
Sbjct: 699 ADKEIFDF 706
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
Query: 275 GRVDEAKMLMAKMRLNGFK---DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
G + EA+ + KM G D+ + + + L C K A+ R E + +V
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--KTATAIIVFREFPEVGVCWNV 246
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
SY +VI+ C++G+ EA LL M +G P V S++ V GELD+ L++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
M + PN Y +II LC ++ + E+ MIR G D +Y+ L+ G+C+ G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRI-CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 452 NVENVMQIAHEMVTK 466
++ + +EM ++
Sbjct: 366 DIRAASKFFYEMHSR 380
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 223/448 (49%), Gaps = 23/448 (5%)
Query: 24 ITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNP 83
+ S++ + P P+ +PL F L NI+T VI ++ N FF WAS
Sbjct: 37 VISILAKKKPIEPAL-----EPLVPF---LSKNIITSVIKDEVNRQLGFRFFIWASR--- 85
Query: 84 NPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK----LSDFFISKLIKAYGDRGNV 139
+ + + + D+L + + L+ + + LI AY G
Sbjct: 86 --RERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMA 143
Query: 140 KAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSI-KLAEEFFHQIVKENVVPPDVSTYT 198
+ A+ F + K+ + +++YN +L V++R LA +++++K N P++ T+
Sbjct: 144 EKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNC-SPNLYTFG 202
Query: 199 TMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
++ G K G +A+K+FD MT + PN + Y +I+G C++G ++A+K EM
Sbjct: 203 ILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTS 262
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G P+ + +NA++ G C GR+ EA L+ +GF + + S++ GL ++ QA
Sbjct: 263 GNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQA 322
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
N+++ N+ PD+ Y ++I G K GK ++A+ LL M ++G+ P + +NAV +
Sbjct: 323 FELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKA 382
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L G L+ L +M + + P+ ++ +IC +C G +++ E++ + +SG +
Sbjct: 383 LCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC-RNGLVREAEEIFTEIEKSGCSP 441
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ L+ G C+ G ++ + H+M
Sbjct: 442 SVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 157/341 (46%), Gaps = 11/341 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI RG+ A F++ + N ++N+LL ++ + A E K+
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
V + Y+++I G + A +++ M +KP+++ Y +I G K G++E+A
Sbjct: 299 FVL-GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K ++ M ++G P+ YNA+I LC G ++E + L +M + TH ++
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICS 417
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+C G +A + ++ +P V ++ +I+G CK G+ EA LL +M G +
Sbjct: 418 MCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV-GRPAS 476
Query: 366 VF-----SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+F S N F +VE+G + +A L P+ VSYN +I G C A G +
Sbjct: 477 LFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA-GDIDG 535
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
L++ + G + D Y+ L+ G G E ++ +
Sbjct: 536 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFY 576
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 165/387 (42%), Gaps = 85/387 (21%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+IKA RG ++ + + E+ ++ L+ + R ++ AEE F +I K
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAK-----------------------KVFDVMT---- 221
P V+T+ +I G CK G ++ A+ + FD M
Sbjct: 439 C-SPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGS 497
Query: 222 ---------------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
P++++YN +INGFC+ G+++ A K +N + +G P+ +TYN
Sbjct: 498 ILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNT 557
Query: 267 MIYGLCINGRVDEA-KMLMAKMRLNGFKDNVSTHKSMLKGLC----VVGKFDQAVGY--- 318
+I GL GR +EA K+ AK + F+ + + ++S++ C V+ F+ + Y
Sbjct: 558 LINGLHRVGREEEAFKLFYAK---DDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKK 614
Query: 319 ------------------------LRNVMEANMNPD---VKSYEVVINGFCKIGKSDEAI 351
LR ++E + D + Y + + G C+ G+ EA+
Sbjct: 615 ISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEAL 674
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI--LLLKQMPQMDCLPNFVSYNTIIC 409
+ +R + + T S + L + +LD AI L +P +Y ++
Sbjct: 675 MVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNY--LLS 732
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLD 436
L + +M+ V L +RM R+G+N+D
Sbjct: 733 SLLESTEKMEIVSQLTNRMERAGYNVD 759
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV- 377
L + ++ D + V+I+ + K+G +++A+ M+ +P VF++N + R+++
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
E A + +M + +C PN ++ ++ GL KGR D + + D M G + +
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGL-YKKGRTSDAQKMFDDMTGRGISPNR 233
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVT 465
Y+ L+ G C+ G+ ++ ++ +EM T
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQT 261
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 204/413 (49%), Gaps = 28/413 (6%)
Query: 68 PYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL----KNSN---K 120
P L FF+W SN + H + + + L +++A + L + SN K
Sbjct: 81 PADGLRFFDWVSNKG-----FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVK 135
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
L D + + LI++YG+ G + ++ F KQ+ + ++NSLL +L++ +A +
Sbjct: 136 LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDL 195
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFC 237
F ++ + V PD T+ T+I G+CK M++ A ++F M + P+++ YNT+I+G C
Sbjct: 196 FDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLC 255
Query: 238 KKGELEEAKKCMNEMMNRGC--RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDN 295
+ G+++ A ++ M+ + PN ++Y ++ G C+ +DEA ++ M G K N
Sbjct: 256 RAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPN 315
Query: 296 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEA--NMNPDVKSYEVVINGFCKIGKSDEAISL 353
T+ +++KGL ++D+ L +A PD ++ ++I C G D A+ +
Sbjct: 316 AVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKV 375
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM-------DCLPNFVSYNT 406
+EM L P S++ + R L E DRA L ++ + +C P +YN
Sbjct: 376 FQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNP 435
Query: 407 IICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ LC A G+ + E + ++++ G D Y L+ G+C EG + ++
Sbjct: 436 MFEYLC-ANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYEL 486
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 133/305 (43%), Gaps = 51/305 (16%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+YN+++ L R +K+A ++K+ V P+V +YTT++RGYC I+ A VF
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 219 VMT---VKPNLLAYNTMINGF-------------------------------------CK 238
M +KPN + YNT+I G C
Sbjct: 306 DMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCD 365
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM----AKMRLNGFKD 294
G L+ A K EM+N P+ +Y+ +I LC+ D A+ L K L G KD
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLG-KD 424
Query: 295 N----VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEA 350
+ + M + LC GK QA R +M+ + D SY+ +I G C+ GK A
Sbjct: 425 ECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPA 483
Query: 351 ISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
LL M R P + ++ + L++ GE A L++M + LP ++++++
Sbjct: 484 YELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAE 543
Query: 411 LCMAK 415
L K
Sbjct: 544 LAKRK 548
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 143/310 (46%), Gaps = 31/310 (10%)
Query: 89 HHTTP---CYTAITDVLLSHSLISIA----ASLLKNSNKLSDFFIS--KLIKAYGDRGNV 139
+H P Y I D L + IA + +LK + + +S L++ Y + +
Sbjct: 238 YHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEI 297
Query: 140 KAAIFWFHQ--AKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN----VVPPD 193
A+ FH ++ ++ A +YN+L+ L + +E ++ N PD
Sbjct: 298 DEAVLVFHDMLSRGLKPNAV--TYNTLIKGLSEAHRY---DEIKDILIGGNDAFTTFAPD 352
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
T+ +I+ +C G ++ A KVF M + P+ +Y+ +I C + E + A+ N
Sbjct: 353 ACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFN 412
Query: 251 EMMNRG-------CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
E+ + C+P YN M LC NG+ +A+ + ++ G +D S +K+++
Sbjct: 413 ELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPS-YKTLI 471
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
G C GKF A L ++ PD+++YE++I+G KIG++ A L+ M
Sbjct: 472 TGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYL 531
Query: 364 PTVFSFNAVF 373
P +F++V
Sbjct: 532 PVATTFHSVL 541
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 37/237 (15%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN + L K AE+ F Q++K V P +Y T+I G+C+ G + A ++ +
Sbjct: 432 AYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP--PSYKTLITGHCREGKFKPAYELLVL 489
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + P+L Y +I+G K GE A + M+ P T+++++ L
Sbjct: 490 MLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKF 549
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSML----------KGLCVVG---------KFDQAVG 317
+E+ L+ M + N+ ++ K +V K ++ +G
Sbjct: 550 ANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLG 609
Query: 318 YL---RNVMEAN----------MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
YL R +++A+ D+ + VI G CK + EA SL E+ G
Sbjct: 610 YLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 202/382 (52%), Gaps = 25/382 (6%)
Query: 92 TPCYTAITDVLLSHSLISIAASL---LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFH 147
T Y+ + + L + S + +A L +K ++D + + ++ ++ G ++ A WF+
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ +++ + +Y +L+ ++ + A E F ++ E +P ++ TY+ +I G+CK
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP-NIVTYSALIDGHCKA 601
Query: 208 GMIENAKKVFDVM-------------------TVKPNLLAYNTMINGFCKKGELEEAKKC 248
G +E A ++F+ M + +PN++ Y +++GFCK +EEA+K
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
++ M GC PN++ Y+A+I GLC G++DEA+ + +M +GF + T+ S++
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
V + D A L ++E + P+V Y +I+G CK+GK+DEA L++ M +G +P V +
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+ A+ G+++ + LL++M PN+V+Y +I C G + +L++ M
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI-DHCCKNGALDVAHNLLEEM 840
Query: 429 IRSGHNLDFTMYSCLLKGYCEE 450
++ Y +++G+ +E
Sbjct: 841 KQTHWPTHTAGYRKVIEGFNKE 862
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/544 (22%), Positives = 217/544 (39%), Gaps = 87/544 (15%)
Query: 42 SSQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDV 101
S + L QF L ++V +V+ P + FF WA Y HT P Y A+ D+
Sbjct: 119 SQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQI----GYKHTAPVYNALVDL 174
Query: 102 LLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC 157
++ + L+ + ++ F++ L++ + G+ A+ + K
Sbjct: 175 IVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPS 234
Query: 158 LYSYNSLLGVLVRVNSIKLA--------------------------------EEFFHQIV 185
+YN L+ ++ + + A E +
Sbjct: 235 RSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE 294
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGEL 242
EN VP D YT +I G C+ + E A + M PN++ Y+T++ G K +L
Sbjct: 295 TENFVP-DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM--------------- 287
K+ +N MM GC P+ +N++++ C +G A L+ KM
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Query: 288 --RLNGFKDNVSTH------------------------KSMLKGLCVVGKFDQAVGYLRN 321
+ G KD+++ S + LC GK+++A +R
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 322 VMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGE 381
++ PD +Y V+N C K + A L +EM+ GL V+++ + + G
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 382 LDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYS 441
+++A +M ++ C PN V+Y +I AK ++ +L + M+ G + YS
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK-KVSYANELFETMLSEGCLPNIVTYS 592
Query: 442 CLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWISRFVF 501
L+ G+C+ G VE QI M K + + + + D +VT G+ + F
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKD-VPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 502 VHQV 505
H+V
Sbjct: 652 SHRV 655
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 169/381 (44%), Gaps = 32/381 (8%)
Query: 111 AASLLKNSNKLSD-FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLV 169
A +L++ N + D F +KLI + + A+ + ++ + + +Y++LL +
Sbjct: 289 ALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 348
Query: 170 RVNSIKLAEEFFHQIVKENVVP-PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----P 224
+ + + ++ E P P + + +++ YC G A K+ M VK P
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKI--FNSLVHAYCTSGDHSYAYKLLKKM-VKCGHMP 405
Query: 225 NLLAYNTMINGFCKKGE------LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
+ YN +I C + L+ A+K +EM+ G N++ ++ LC G+ +
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A ++ +M GF + ST+ +L LC K + A + + DV +Y +++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
+ FCK G ++A EMR G P V ++ A+ ++ ++ A L + M CL
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM----------------YSC 442
PN V+Y+ +I G C A G+++ + +RM S D M Y
Sbjct: 586 PNIVTYSALIDGHCKA-GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 443 LLKGYCEEGNVENVMQIAHEM 463
LL G+C+ VE ++ M
Sbjct: 645 LLDGFCKSHRVEEARKLLDAM 665
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 131/282 (46%), Gaps = 43/282 (15%)
Query: 156 ACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKK 215
A LY+Y+SL+ +V LA + +++ EN P+V YT MI G CK+G + A K
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKML-ENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 216 VFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ +M K PN++ Y MI+GF G++E + + M ++G PN +TY +I C
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
NG +D A L+ +M+ + + + ++ +++G +F +++G L + + + P +
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLS 883
Query: 333 SYEVVIN-------------------------------------GFCKIGKSDEAISLLK 355
Y ++I+ C K + A L
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 943
Query: 356 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
EM +G+ P + SF ++ + L N ++ A+LLL + M C
Sbjct: 944 EMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVC 985
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 177/342 (51%), Gaps = 4/342 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +++ Y + G++ A+ Q + S N ++ + ++ A F ++
Sbjct: 228 TTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSN 287
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
++ PD T+ T++ G CK G +++A ++ DVM + P++ YN++I+G CK GE++
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +++M+ R C PN +TYN +I LC +V+EA L + G +V T S++
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+GLC+ A+ + PD +Y ++I+ C GK DEA+++LK+M G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+V ++N + + + A + +M N V+YNT+I GLC ++ R++D
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR-RVEDAAQ 526
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
L+D+MI G D Y+ LL +C G+++ I M +
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 175/346 (50%), Gaps = 5/346 (1%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ + L+ G+VK AI Q +Y+YNS++ L ++ +K A E Q
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKG 240
++ + P V TY T+I CK +E A ++ V+T K P++ +N++I G C
Sbjct: 356 MITRDCSPNTV-TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
A + EM ++GC P+E TYN +I LC G++DEA ++ +M L+G +V T+
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+++ G C K +A + ++ + +Y +I+G CK + ++A L+ +M
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G KP +++N++ G++ +A +++ M C P+ V+Y T+I GLC A GR++
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA-GRVEV 593
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+ + G NL Y+ +++G + + + EM+ +
Sbjct: 594 ASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 176/344 (51%), Gaps = 41/344 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ L R + ++ A + +VP D T+TT+++GY + G ++ A ++ +
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVP-DEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR-GCRPNELTYNAMIYGLCING 275
M + ++ N +++GFCK+G +E+A + EM N+ G P++ T+N ++ GLC G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
V A +M M G+ +V T+ S++ GLC +G+ +AV L ++ + +P+ +Y
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 336 VVINGFCKIGKSDE-----------------------------------AISLLKEMRAR 360
+I+ CK + +E A+ L +EMR++
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G +P F++N + L G+LD A+ +LKQM C + ++YNT+I G C A + ++
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN-KTRE 488
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
E++ D M G + + Y+ L+ G C+ VE+ Q+ +M+
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 161/307 (52%), Gaps = 6/307 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN +L +LV NS+KL E H + + PDVST+ +I+ C+ + A + + M
Sbjct: 157 YNRMLNLLVDGNSLKLVE-ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM 215
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ P+ + T++ G+ ++G+L+ A + +M+ GC + ++ N +++G C GRV
Sbjct: 216 PSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRV 275
Query: 278 DEAKMLMAKMR-LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++A + +M +GF + T +++ GLC G A+ + +++ +PDV +Y
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G CK+G+ EA+ +L +M R P ++N + L + +++ A L + +
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
LP+ ++N++I GLC+ + +E L + M G D Y+ L+ C +G ++
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAME-LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 457 MQIAHEM 463
+ + +M
Sbjct: 455 LNMLKQM 461
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 168/332 (50%), Gaps = 17/332 (5%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++NSL+ L + ++A E F ++ + PD TY +I C G ++ A +
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + +++ YNT+I+GFCK + EA++ +EM G N +TYN +I GLC + R
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++A LM +M + G K + T+ S+L C G +A ++ + PD+ +Y
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM-PQM 395
+I+G CK G+ + A LL+ ++ +G+ T ++N V + L + AI L ++M Q
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ P+ VSY + GLC G +++ D + ++ G +F+ L +G E
Sbjct: 641 EAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET 700
Query: 456 VMQIAHEMVTKKGR-----------LLKLKNF 476
++++ + MV +K R LLK++ F
Sbjct: 701 LVKLVN-MVMQKARFSEEEVSMVKGLLKIRKF 731
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 128/255 (50%), Gaps = 12/255 (4%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYS---YNSLLGVLVRVNSIKLAEE 179
+F + LI + +G + A+ + KQ+E C S YN+L+ + N + AEE
Sbjct: 435 EFTYNMLIDSLCSKGKLDEAL---NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGF 236
F ++ V V TY T+I G CK +E+A ++ D M + KP+ YN+++ F
Sbjct: 492 IFDEMEVHGVSRNSV-TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C+ G++++A + M + GC P+ +TY +I GLC GRV+ A L+ +++ G
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP 610
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEAN-MNPDVKSYEVVINGFCKIGKS-DEAISLL 354
+ +++GL K +A+ R ++E N PD SY +V G C G EA+ L
Sbjct: 611 HAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFL 670
Query: 355 KEMRARGLKPTVFSF 369
E+ +G P S
Sbjct: 671 VELLEKGFVPEFSSL 685
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 142/288 (49%), Gaps = 7/288 (2%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMT----VKPNLLAYNTMINGFCKKGELEEAKKCM 249
ST+ +I Y + + + V D M +KP+ YN M+N L+ +
Sbjct: 118 TSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISH 177
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M G +P+ T+N +I LC ++ A +++ M G + T ++++G
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR-GLKPTVFS 368
G D A+ ++E + S V+++GFCK G+ ++A++ ++EM + G P ++
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
FN + L + G + AI ++ M Q P+ +YN++I GLC G +++ +++D+M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL-GEVKEAVEVLDQM 356
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNF 476
I + + Y+ L+ C+E VE ++A ++T KG L + F
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELAR-VLTSKGILPDVCTF 403
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 39/205 (19%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YNSLL R IK A + Q + N PD+ TY T+I G CK G +E A K+
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIV-QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 219 VMTVKP-NLL--AYNTMINGFCKKGELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLC-I 273
+ +K NL AYN +I G +K + EA EM+ + P+ ++Y + GLC
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNG 659
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVST---------------------------------HK 300
G + EA + ++ GF S+
Sbjct: 660 GGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV 719
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEA 325
SM+KGL + KF A+ L V+++
Sbjct: 720 SMVKGLLKIRKFQDALATLGGVLDS 744
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 37/213 (17%)
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
F + ++ +L L G FD L ++ + ++ ++I + + DE +
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 352 SLLK------------------------------------EMRARGLKPTVFSFNAVFRI 375
S++ +M G+KP V +FN + +
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L +L AIL+L+ MP +P+ ++ T++ G + +G + + ++M+ G +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY-IEEGDLDGALRIREQMVEFGCSW 257
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKG 468
+ ++ G+C+EG VE+ + EM + G
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 173/310 (55%), Gaps = 5/310 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ + I+ A++ F ++ K +V + TYT +I G K G+ + ++++ M
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE-RTYTVLINGLFKNGVKKQGFEMYEKM 259
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
V PNL YN ++N CK G ++A + +EM RG N +TYN +I GLC ++
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL 319
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA ++ +M+ +G N+ T+ +++ G C VGK +A+ R++ ++P + +Y ++
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
++GFC+ G + A ++KEM RG+KP+ ++ + + +++AI L M ++
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ +Y+ +I G C+ KG+M + L M+ + +Y+ ++ GYC+EG+ +
Sbjct: 440 VPDVHTYSVLIHGFCI-KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 458 QIAHEMVTKK 467
++ EM K+
Sbjct: 499 KLLKEMEEKE 508
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 158/302 (52%), Gaps = 8/302 (2%)
Query: 136 RGNVKAAIFWFHQAKQIENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
+ VK F ++ Q E+G LY+YN ++ L + K A + F ++ +E V +
Sbjct: 245 KNGVKKQGFEMYEKMQ-EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM-RERGVSCN 302
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMN 250
+ TY T+I G C+ + A KV D M + PNL+ YNT+I+GFC G+L +A
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
++ +RG P+ +TYN ++ G C G A ++ +M G K + T+ ++
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
++A+ ++ E + PDV +Y V+I+GFC G+ +EA L K M + +P +N
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ + G RA+ LLK+M + + PN SY +I LC + + ++ E LV++MI
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER-KSKEAERLVEKMID 541
Query: 431 SG 432
SG
Sbjct: 542 SG 543
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 39/268 (14%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G K A F + ++ + +YN+L+G L R + A + Q+ K + + P++ T
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM-KSDGINPNLIT 340
Query: 197 YTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y T+I G+C +G + A + + P+L+ YN +++GFC+KG+ A K + EM
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 254 NRGCRPNELTY-----------------------------------NAMIYGLCINGRVD 278
RG +P+++TY + +I+G CI G+++
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
EA L M + N + +M+ G C G +A+ L+ + E + P+V SY +I
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTV 366
CK KS EA L+++M G+ P+
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
YEV+IN + + + +IS EM G P FN + +V + ++ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
L + S+ +I G C A G ++ DL+ + G + + +Y+ L+ G C++G +
Sbjct: 157 SKVVL-DVYSFGILIKGCCEA-GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 454 ENVMQIAHEM 463
E + EM
Sbjct: 215 EKAKDLFFEM 224
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 160/285 (56%), Gaps = 4/285 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y GN+ HQ ++ +++Y++L+ L + N + A F ++ K
Sbjct: 281 LINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG 340
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
++P DV +TT+I G+ + G I+ K+ + M K P+++ YNT++NGFCK G+L A
Sbjct: 341 LIPNDV-IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ ++ M+ RG RP+++TY +I G C G V+ A + +M NG + + +++ G
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
+C G+ A LR ++ A + PD +Y ++++ FCK G + LLKEM++ G P+
Sbjct: 460 MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS 519
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG 410
V ++N + L + G++ A +LL M + +P+ ++YNT++ G
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 203/422 (48%), Gaps = 33/422 (7%)
Query: 68 PYHALF-FFNW-ASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL------KNSN 119
P ++F FF + +S P + T Y + L H + + A SL+ K N
Sbjct: 97 PQRSIFAFFKFISSQPG-----FRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKN 151
Query: 120 KLSDFFIS---------------KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSL 164
S FIS L+ Y D G + AI F +++ + +L
Sbjct: 152 SASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNL 211
Query: 165 LGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--- 221
L ++++N F+ +I+ P +V + ++ +CK G I +A+KVFD +T
Sbjct: 212 LDRMMKLNPTGTIWGFYMEILDAGF-PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
++P ++++NT+ING+CK G L+E + ++M RP+ TY+A+I LC ++D A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L +M G N +++ G G+ D + ++ + PD+ Y ++NGF
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK G A +++ M RGL+P ++ + G+++ A+ + K+M Q +
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
V ++ ++CG+C +GR+ D E + M+R+G D Y+ ++ +C++G+ + ++
Sbjct: 451 VGFSALVCGMC-KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509
Query: 462 EM 463
EM
Sbjct: 510 EM 511
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 164/327 (50%), Gaps = 5/327 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ + GN+ A F + + + S+N+L+ +V ++ HQ+ K
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEA 245
PDV TY+ +I CK ++ A +FD M + PN + + T+I+G + GE++
Sbjct: 306 T-RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLM 364
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K+ +M+++G +P+ + YN ++ G C NG + A+ ++ M G + + T+ +++ G
Sbjct: 365 KESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDG 424
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
C G + A+ + + + + D + ++ G CK G+ +A L+EM G+KP
Sbjct: 425 FCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
++ + + G+ LLK+M +P+ V+YN ++ GLC G+M++ + L+
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL-GQMKNADMLL 543
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGN 452
D M+ G D Y+ LL+G+ N
Sbjct: 544 DAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 35.8 bits (81), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 114 LLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+L+ K D + ++ A+ +G+ + + + + + +YN LL L ++
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYN 230
+K A+ ++ VVP D+ TY T++ G+ + N+ K + + + +L +Y
Sbjct: 536 MKNADMLLDAMLNIGVVPDDI-TYNTLLEGHHRHA---NSSKRYIQKPEIGIVADLASYK 591
Query: 231 TMINGFCKKGELEEAKK 247
+++N EL+ A K
Sbjct: 592 SIVN------ELDRASK 602
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
N +N ++ C +G + D + + D + + ++ L+ GYC+ GN++ ++
Sbjct: 239 NVYVFNILMNKFC-KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 460 AHEMVTKKGR 469
H+M + R
Sbjct: 298 KHQMEKSRTR 307
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 249/534 (46%), Gaps = 100/534 (18%)
Query: 1 MATPRRSLTNISQIPD--QSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIV 58
M+ P R L+ +S+ P+ +S + S+ S I SP ++SS FSL L
Sbjct: 60 MSVPHRLLSILSK-PNWHKSPSLKSMVSAI--------SPSHVSSL----FSLDL----- 101
Query: 59 TKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIA------- 111
+P AL F +W S NP +Y H+ Y ++ +L+++ + +
Sbjct: 102 --------DPKTALNFSHWISQ---NP-RYKHSVYSYASLLTLLINNGYVGVVFKIRLLM 149
Query: 112 -------------ASLLKNSNKLSDFFISK--LIKAYGDRGNVKAAIFWFHQAKQI---- 152
L + NK F + +I Y N A + KQ+
Sbjct: 150 IKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEM 209
Query: 153 -ENGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGM 209
E+ C +Y+YN ++ ++ +++ A ++ +IV E + PD TYT++I GYC+
Sbjct: 210 LEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV-EAGLDPDFFTYTSLIMGYCQRKD 268
Query: 210 IENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNA 266
+++A KVF+ M +K N +AY +I+G C ++EA +M + C P TY
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 267 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 326
+I LC + R EA L+ +M G K N+ T+ ++ LC KF++A L ++E
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ P+V +Y +ING+CK G ++A+ +++ M +R L P ++N + + ++ + +A+
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAM 447
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMA-------------------------------- 414
+L +M + LP+ V+YN++I G C +
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 415 --KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R+++ DL D + + G N + MY+ L+ GYC+ G V+ + +M++K
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Score = 162 bits (409), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 166/311 (53%), Gaps = 9/311 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+++Y L+ L + A E Q++++ ++P +V TY +I GYCK GMIE+A V
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP-NVITYNALINGYCKRGMIEDAVDVV 416
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
++M + PN YN +I G+C K + +A +N+M+ R P+ +TYN++I G C +
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A L++ M G + T+ SM+ LC + ++A ++ + +NP+V Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G+CK GK DEA +L++M ++ P +FNA+ L +G+L A LL ++M +
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG--- 451
+ P VS +TI+ + G +M+ SG D Y+ ++ YC EG
Sbjct: 596 IGLQPT-VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 452 NVENVMQIAHE 462
+ E++M E
Sbjct: 655 DAEDMMAKMRE 665
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 184/362 (50%), Gaps = 22/362 (6%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
++LIK Y + NV A+ ++ + + + +YNSL+ R + A +
Sbjct: 432 NELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+VP D TYT+MI CK +E A +FD + V PN++ Y +I+G+CK G+++
Sbjct: 491 RGLVP-DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + +M+++ C PN LT+NA+I+GLC +G++ EA +L KM G + VST ++
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
L G FD A + ++ + PD +Y I +C+ G+ +A ++ +MR G+
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC-MAKGRMQDVE 422
P +F+++++ + + G+ + A +LK+M C P+ ++ ++I L M G+ + E
Sbjct: 670 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSE 729
Query: 423 ----------------DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L+++M+ + Y L+ G CE GN+ ++ M
Sbjct: 730 PELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRN 789
Query: 467 KG 468
+G
Sbjct: 790 EG 791
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 152/277 (54%), Gaps = 5/277 (1%)
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
+ Y T++ + G+++ K+V+ M V PN+ YN M+NG+CK G +EEA + ++
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
+++ G P+ TY ++I G C +D A + +M L G + N + ++ GLCV
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ D+A+ + + P V++Y V+I C + EA++L+KEM G+KP + ++
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ L + ++A LL QM + +PN ++YN +I G C +G ++D D+V+ M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC-KRGMIEDAVDVVELMES 421
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ + Y+ L+KGYC + NV M + ++M+ +K
Sbjct: 422 RKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERK 457
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 161/415 (38%), Gaps = 129/415 (31%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y S++ L + ++ A + F + ++ V P+V YT +I GYCK G ++ A + +
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAK----------------------------- 246
M K PN L +N +I+G C G+L+EA
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 247 ------KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+M++ G +P+ TY I C GR+ +A+ +MAKMR NG ++ T+
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 301 SMLKG--------------------------------------------------LCVVG 310
S++KG LC +
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMS 736
Query: 311 ---KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG---------------------- 345
+FD V L ++E ++ P+ KSYE +I G C++G
Sbjct: 737 NMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Query: 346 --------------KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
K +EA ++ +M G P + S + L + GE +R + +
Sbjct: 797 LVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
+ Q + +++ II G+ +G ++ +L + M ++G YS L++G
Sbjct: 857 LLQCGYYEDELAWKIIIDGV-GKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 135/310 (43%), Gaps = 21/310 (6%)
Query: 70 HALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKL 129
HA F + P+ + +TT T + L + + A + +N F S L
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE-DMMAKMRENGVSPDLFTYSSL 678
Query: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
IK YGD G F F K++ + C S ++ L ++ + +K K+
Sbjct: 679 IKGYGDLGQTN---FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYG--------KQKG 727
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCM 249
P++ + M+ + ++E + +V PN +Y +I G C+ G L A+K
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVE----HSVTPNAKSYEKLILGICEVGNLRVAEKVF 783
Query: 250 NEMM-NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ M N G P+EL +NA++ C + +EA ++ M G + + K ++ GL
Sbjct: 784 DHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYK 843
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G+ ++ +N+++ D +++++I+G K G + L M G K FS
Sbjct: 844 KGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK---FS 900
Query: 369 FNAVFRILVE 378
+ + +L+E
Sbjct: 901 -SQTYSLLIE 909
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 161/301 (53%), Gaps = 6/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ Y +++ L + + AE F +I+K V D T+++ G+C+ + +A KVF
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVL-DSHIGTSLLLGFCRGLNLRDALKVF 253
Query: 218 DVM----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
DVM T PN ++Y+ +I+G C+ G LEEA ++M +GC+P+ TY +I LC
Sbjct: 254 DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD 313
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G +D+A L +M G K NV T+ ++ GLC GK ++A G R +++ + P V +
Sbjct: 314 RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVIT 373
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +ING+CK G+ A LL M R KP V +FN + L G+ +A+ LLK+M
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
P+ VSYN +I GLC +G M L+ M D ++ ++ +C++G
Sbjct: 434 DNGLSPDIVSYNVLIDGLC-REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 454 E 454
+
Sbjct: 493 D 493
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 163/315 (51%), Gaps = 14/315 (4%)
Query: 136 RG-NVKAAIFWFH-QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF-FHQIVKENVVPP 192
RG N++ A+ F +K++ SY+ L+ L V +L E F + E P
Sbjct: 242 RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVG--RLEEAFGLKDQMGEKGCQP 299
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
TYT +I+ C G+I+ A +FD M KPN+ Y +I+G C+ G++EEA
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+M+ P+ +TYNA+I G C +GRV A L+ M K NV T +++GLC V
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
GK +AV L+ +++ ++PD+ SY V+I+G C+ G + A LL M ++P +F
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD----VEDLV 425
A+ + G+ D A L M + + V+ T+I G+C G+ +D +E LV
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKV-GKTRDALFILETLV 538
Query: 426 D-RMIRSGHNLDFTM 439
R++ + H+L+ +
Sbjct: 539 KMRILTTPHSLNVIL 553
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 172/376 (45%), Gaps = 40/376 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LIKA DRG + A F + +++Y L+ L R I+ A ++VK+
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------------------- 221
+ P V TY +I GYCK G + A ++ VM
Sbjct: 367 IFPS-VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 222 -----------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+ P++++YN +I+G C++G + A K ++ M P+ LT+ A+I
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C G+ D A + M G + T +++ G+C VGK A+ L +++ +
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
S V+++ K K E +++L ++ GL P+V ++ + L+ +G++ + +L+
Sbjct: 546 PHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILE 605
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
M CLPN Y II GLC GR+++ E L+ M SG + + Y+ ++KGY
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQF-GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 451 GNVENVMQIAHEMVTK 466
G ++ ++ MV +
Sbjct: 665 GKLDRALETVRAMVER 680
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 154/336 (45%), Gaps = 45/336 (13%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
LI Y G V A F +E AC + ++N L+ L RV A +++
Sbjct: 377 LINGYCKDGRVVPA---FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
+N + PD+ +Y +I G C+ G + A K+ M ++P+ L + +IN FCK+G+
Sbjct: 434 -DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM---AKMR-------LN-- 290
+ A + M+ +G +E+T +I G+C G+ +A ++ KMR LN
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 291 -----------------------GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
G +V T+ +++ GL G + L + +
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P+V Y ++ING C+ G+ +EA LL M+ G+ P ++ + + V NG+LDRA+
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
++ M + N Y++++ G +++ + + E+
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 158/368 (42%), Gaps = 60/368 (16%)
Query: 157 CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
CL ++ +++ + +A F ++++ + +V T TT+I G CK+G +A +
Sbjct: 476 CL-TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV-TGTTLIDGVCKVGKTRDALFI 533
Query: 217 FDVMT--------------------------------------VKPNLLAYNTMINGFCK 238
+ + + P+++ Y T+++G +
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
G++ + + + M GC PN Y +I GLC GRV+EA+ L++ M+ +G N T
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC--KIGKSDEAISLLKE 356
+ M+KG GK D+A+ +R ++E + + Y ++ GF + G + S + +
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSD 713
Query: 357 MRARGLKPTVF--------------SFNAVFRI--LVENGELDRAILLLKQMPQMDCLPN 400
+ R P S +F + L + G D + L++ + +
Sbjct: 714 IALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE 773
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
+ + I+ C K + +E L+ +++SG F + +++G +EG+ E ++
Sbjct: 774 -KAMDIIMESYCSKKKHTKCME-LITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELV 831
Query: 461 HEMVTKKG 468
E++T G
Sbjct: 832 MELLTSNG 839
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 84/208 (40%), Gaps = 39/208 (18%)
Query: 262 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRN 321
+ Y ++ LC NG + A+M M+K+ GF + S+L G C A+ +
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF-D 254
Query: 322 VM--EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
VM E P+ SY ++I+G C++
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEV----------------------------------- 279
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
G L+ A L QM + C P+ +Y +I LC +G + +L D MI G +
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC-DRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTKK 467
Y+ L+ G C +G +E + +MV +
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 12/182 (6%)
Query: 291 GFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD-----VKSYEVVINGFCKIG 345
GF+ N + S+L L K D +G+L V M D + Y ++N CK G
Sbjct: 155 GFRLNYPCYSSLLMSL---AKLD--LGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNG 209
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP-QMDCLPNFVSY 404
++ A + ++ G ++ L A+ + M ++ C PN VSY
Sbjct: 210 YTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSY 269
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ +I GLC GR+++ L D+M G Y+ L+K C+ G ++ + EM+
Sbjct: 270 SILIHGLCEV-GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 465 TK 466
+
Sbjct: 329 PR 330
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 157/283 (55%), Gaps = 5/283 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGE 241
+K+N D+ TY+++I G C G ++ A+ VF D +++ YNTM+ GFC+ G+
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK 340
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
++E+ + + +M N ++YN +I GL NG++DEA M+ M G+ + +T+
Sbjct: 341 IKESLE-LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGI 399
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+ GLCV G ++A+G ++ V + + DV +Y +I+ CK + +EA +L+KEM G
Sbjct: 400 FIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG 459
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
++ NA+ L+ + L A L++M + C P VSYN +ICGLC A G+ +
Sbjct: 460 VELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA-GKFGEA 518
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
V M+ +G D YS LL G C + ++ +++ H+ +
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 200/405 (49%), Gaps = 24/405 (5%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSH----SLISIAASLLKNSN-----KL 121
AL F+ S P+ CY + D L + + + LL++S+ K
Sbjct: 203 ALELFDEMSERGVAPD-----VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKT 257
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFF 181
+ IS L K G V + + + KQ E LY+Y+SL+ L ++ AE F
Sbjct: 258 HNIMISGLSKC----GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 182 HQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP--NLLAYNTMINGFCKK 239
+++ E DV TY TM+ G+C+ G I+ + +++ +M K N+++YN +I G +
Sbjct: 314 NEL-DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLEN 372
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G+++EA M +G ++ TY I+GLC+NG V++A +M ++ +G +V +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S++ LC + ++A ++ + + + + +I G + + EA L+EM
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G +PTV S+N + L + G+ A +K+M + P+ +Y+ ++CGLC + R
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC--RDRKI 550
Query: 420 DVE-DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D+ +L + ++SG D M++ L+ G C G +++ M + M
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 169/373 (45%), Gaps = 42/373 (11%)
Query: 115 LKNSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173
+K + + D + S LI D GNV A F++ + + + +YN++LG R
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK 340
Query: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP--------- 224
IK + E + + +N V ++ +Y +I+G + G I+ A ++ +M K
Sbjct: 341 IKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 225 -----------------------------NLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
++ AY ++I+ CKK LEEA + EM
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
G N NA+I GL + R+ EA + +M NG + V ++ ++ GLC GKF +A
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+++ ++E PD+K+Y +++ G C+ K D A+ L + GL+ V N +
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L G+LD A+ ++ M +C N V+YNT++ G G + M + G
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF-FKVGDSNRATVIWGYMYKMGLQP 637
Query: 436 DFTMYSCLLKGYC 448
D Y+ ++KG C
Sbjct: 638 DIISYNTIMKGLC 650
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 135/267 (50%), Gaps = 18/267 (6%)
Query: 154 NGACLYSY-NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIEN 212
+G C+ Y N LGV+ Q V+ + DV Y ++I CK +E
Sbjct: 402 HGLCVNGYVNKALGVM--------------QEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 213 AKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
A + M+ V+ N N +I G + L EA + EM GCRP ++YN +I
Sbjct: 448 ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILIC 507
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
GLC G+ EA + +M NG+K ++ T+ +L GLC K D A+ +++ +
Sbjct: 508 GLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLET 567
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
DV + ++I+G C +GK D+A++++ M R + ++N + + G+ +RA ++
Sbjct: 568 DVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKG 416
M +M P+ +SYNTI+ GLCM +G
Sbjct: 628 GYMYKMGLQPDIISYNTIMKGLCMCRG 654
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 135/289 (46%), Gaps = 6/289 (2%)
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF----DVMTVKPNLLAYNTMINGFCK 238
++++ D ++I+ Y K M + A VF ++ +P + +YNT++N F +
Sbjct: 67 ELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVE 126
Query: 239 KGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ + + G PN TYN +I C ++A+ + M GFK +V +
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFS 186
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE-M 357
+ +++ L GK D A+ + E + PDV Y ++I+GF K A+ L +
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ P V + N + L + G +D + + ++M Q + + +Y+++I GLC A G
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA-GN 305
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ E + + + ++D Y+ +L G+C G ++ +++ M K
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 111/219 (50%), Gaps = 4/219 (1%)
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM- 220
N+L+G L+R + + A F ++ K N P V +Y +I G CK G A M
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGK-NGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526
Query: 221 --TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
KP+L Y+ ++ G C+ +++ A + ++ + G + + +N +I+GLC G++D
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLD 586
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A +MA M N+ T+ ++++G VG ++A + + + PD+ SY ++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
G C A+ + R G+ PTV+++N + R +V
Sbjct: 647 KGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 192/383 (50%), Gaps = 22/383 (5%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G V AA F++ + E + +N+L+ V + A+ +V + PDV T
Sbjct: 336 GRVDAAKDLFYRIPKPE----IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y ++I GY K G++ A +V M KPN+ +Y +++GFCK G+++EA +NEM
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G +PN + +N +I C R+ EA + +M G K +V T S++ GLC V +
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
A+ LR+++ + + +Y +IN F + G+ EA L+ EM +G ++N++
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+ L GE+D+A L ++M + P+ +S N +I GLC + G +++ + M+ G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS-GMVEEAVEFQKEMVLRGS 630
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGG 493
D ++ L+ G C G +E+ + + ++ +G F T L+ W+ GG
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKL-QAEGIPPDTVTFNT------LMSWLCKGG 683
Query: 494 SWISRFVFVHQVVVIMERTVEDG 516
FV+ ++++ +EDG
Sbjct: 684 -------FVYDACLLLDEGIEDG 699
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 146/252 (57%), Gaps = 4/252 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+N L+ + + I A E F ++ ++ PDV T+ ++I G C++ I++A +
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGC-KPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V N + YNT+IN F ++GE++EA+K +NEM+ +G +E+TYN++I GLC G
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A+ L KM +G + + ++ GLC G ++AV + + ++ PD+ ++
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING C+ G+ ++ +++ ++++A G+ P +FN + L + G + A LLL + +
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Query: 397 CLPNFVSYNTII 408
+PN +++ ++
Sbjct: 700 FVPNHRTWSILL 711
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 164/311 (52%), Gaps = 10/311 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
SYN +L +LV N K+A F+ ++ +PP + T+ +++ +C + I++A +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRK-IPPTLFTFGVVMKAFCAVNEIDSALSLLRD 242
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT PN + Y T+I+ K + EA + + EM GC P+ T+N +I GLC R
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EA ++ +M + GF + T+ ++ GLC +G+ D A +++ P++ +
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNT 358
Query: 337 VINGFCKIGKSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+GF G+ D+A ++L +M + G+ P V ++N++ + G + A+ +L M
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
C PN SY ++ G C G++ + ++++ M G + ++CL+ +C+E +
Sbjct: 419 GCKPNVYSYTILVDGFCKL-GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 456 VMQIAHEMVTK 466
++I EM K
Sbjct: 478 AVEIFREMPRK 488
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 131/259 (50%), Gaps = 4/259 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A+ + A+ F + + +Y++NSL+ L V+ IK A ++ E
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL---AYNTMINGFCKKGELEEA 245
VV V TY T+I + + G I+ A+K+ + M + + L YN++I G C+ GE+++A
Sbjct: 525 VVANTV-TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +M+ G P+ ++ N +I GLC +G V+EA +M L G ++ T S++ G
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G+ + + R + + PD ++ +++ CK G +A LL E G P
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Query: 366 VFSFNAVFRILVENGELDR 384
+++ + + ++ LDR
Sbjct: 704 HRTWSILLQSIIPQETLDR 722
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 144/315 (45%), Gaps = 19/315 (6%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF--- 217
Y L+G L K + Q+ E +V + S + +++R Y K G ++
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKE-SLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 218 -DVMTVKPNLLAYNT----MINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+V + +P +YN +++G C K A +M++R P T+ ++ C
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHK----VAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+D A L+ M +G N +++++ L + ++A+ L + PD +
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
++ VI G CK + +EA ++ M RG P ++ + L + G +D A L ++
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRS-GHNLDFTMYSCLLKGYCEEG 451
P+ P V +NT+I G + GR+ D + ++ M+ S G D Y+ L+ GY +EG
Sbjct: 349 PK----PEIVIFNTLIHGF-VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 452 NVENVMQIAHEMVTK 466
V +++ H+M K
Sbjct: 404 LVGLALEVLHDMRNK 418
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
Query: 92 TPCYTAITDVLLSHSLISIAASLLK----NSNKLSDFFISKLIKAYGDRGNVKAAIFWFH 147
T Y + + L I A L+ + L + + LIK G V A F
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 148 QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM 207
+ + + S N L+ L R ++ A EF ++V P D+ T+ ++I G C+
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP-DIVTFNSLINGLCRA 647
Query: 208 GMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
G IE+ +F + + P+ + +NT+++ CK G + +A ++E + G PN T+
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 265 NAMIYGLCINGRVDEAKMLMA 285
+ ++ + +D + A
Sbjct: 708 SILLQSIIPQETLDRRRFYNA 728
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 168/307 (54%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++G L + LA + +Q++ +N P V TYT +I G ++ A K+ D
Sbjct: 195 TYNIMIGSLCSRGKLDLALKVLNQLLSDNC-QPTVITYTILIEATMLEGGVDEALKLMDE 253
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +KP++ YNT+I G CK+G ++ A + + + +GC P+ ++YN ++ L G+
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+E + LM KM NV T+ ++ LC GK ++A+ L+ + E + PD SY+
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I FC+ G+ D AI L+ M + G P + ++N V L +NG+ D+A+ + ++ ++
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
C PN SYNT+ L + +++ + ++ M+ +G + D Y+ ++ C EG V+
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALH-MILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Query: 457 MQIAHEM 463
++ +M
Sbjct: 493 FELLVDM 499
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 148/278 (53%), Gaps = 4/278 (1%)
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+ E PDV Y +I G+CKM I++A +V D M K P+ + YN MI C +G+
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L+ A K +N++++ C+P +TY +I + G VDEA LM +M G K ++ T+ +
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+++G+C G D+A +RN+ PDV SY +++ GK +E L+ +M +
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
P V +++ + L +G+++ A+ LLK M + P+ SY+ +I C +GR+
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC-REGRLDVA 387
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
+ ++ MI G D Y+ +L C+ G + ++I
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 150/276 (54%), Gaps = 3/276 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTV--KPNLLAYNTMINGFCKKGELEEAKKCM 249
PDV T +I+G+ + I A +V +++ +P++ AYN +INGFCK +++A + +
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVL 181
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
+ M ++ P+ +TYN MI LC G++D A ++ ++ + + V T+ +++ +
Sbjct: 182 DRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLE 241
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G D+A+ + ++ + PD+ +Y +I G CK G D A +++ + +G +P V S+
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
N + R L+ G+ + L+ +M C PN V+Y+ +I LC G++++ +L+ M
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC-RDGKIEEAMNLLKLMK 360
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
G D Y L+ +C EG ++ ++ M++
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 156/313 (49%), Gaps = 11/313 (3%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + +I+ G V A F + +E C + SYN LL L+ + E+
Sbjct: 264 FTYNTIIRGMCKEGMVDRA---FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 320
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFC 237
++ E P+V TY+ +I C+ G IE A + +M K P+ +Y+ +I FC
Sbjct: 321 MTKMFSEKC-DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
++G L+ A + + M++ GC P+ + YN ++ LC NG+ D+A + K+ G N S
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
++ +M L G +A+ + +M ++PD +Y +I+ C+ G DEA LL +M
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
R+ P+V ++N V + ++ AI +L+ M C PN +Y +I G+ A R
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559
Query: 418 MQDVEDLVDRMIR 430
+ +E L + ++R
Sbjct: 560 AEAME-LANDLVR 571
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 52/243 (21%)
Query: 291 GFKDNVSTHKSMLKGL---CVVGKFDQAVGYLRNVMEANMNPDVK--------------- 332
GF+D MLK C G + +++ L ++ NPDV
Sbjct: 86 GFRDT-----QMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNI 140
Query: 333 -------------------SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+Y +INGFCK+ + D+A +L MR++ P ++N +
Sbjct: 141 PKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI 200
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L G+LD A+ +L Q+ +C P ++Y TI+ M +G + + L+D M+ G
Sbjct: 201 GSLCSRGKLDLALKVLNQLLSDNCQPTVITY-TILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDA-LLLMWIVTG 492
D Y+ +++G C+EG V+ A EMV R L+LK V+ +LL ++
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDR----AFEMV----RNLELKGCEPDVISYNILLRALLNQ 311
Query: 493 GSW 495
G W
Sbjct: 312 GKW 314
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 203/415 (48%), Gaps = 37/415 (8%)
Query: 56 NIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL 115
N V VI + + L F+++ N N N N I+ LS +L+ A L
Sbjct: 152 NSVLNVIINEGLYHRGLEFYDYVVNSNMNMN-----------ISPNGLSFNLVIKALCKL 200
Query: 116 KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK 175
+ F+ + I+ + RG + K + +G Y+Y +L+ L + I
Sbjct: 201 R--------FVDRAIEVF--RG--------MPERKCLPDG---YTYCTLMDGLCKEERID 239
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTM 232
A ++ E P V Y +I G CK G + K+ D M +K PN + YNT+
Sbjct: 240 EAVLLLDEMQSEGCSPSPV-IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
I+G C KG+L++A + M++ C PN++TY +I GL R +A L++ M G+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
N + ++ GL GK ++A+ R + E P++ Y V+++G C+ GK +EA
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
+L M A G P ++++++ + + G + A+ + K+M + C N Y+ +I GLC
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
GR+++ + +M+ G D YS ++KG C G+++ +++ HEM+ ++
Sbjct: 479 -GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 181/389 (46%), Gaps = 45/389 (11%)
Query: 118 SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL-YSYNSLLGVLVRVNSIKL 176
S KL D +S +I++Y + G+ + + + +EN + S+ + + +
Sbjct: 72 SFKLGDSTLSSMIESYANSGDFDSVEKLLSRIR-LENRVIIERSFIVVFRAYGKAHLPDK 130
Query: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV-------MTVKPNLLAY 229
A + FH++V E V ++ +++ G+ + +D M + PN L++
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSF 190
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR- 288
N +I CK ++ A + M R C P+ TY ++ GLC R+DEA +L+ +M+
Sbjct: 191 NLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS 250
Query: 289 ----------------------------------LNGFKDNVSTHKSMLKGLCVVGKFDQ 314
L G N T+ +++ GLC+ GK D+
Sbjct: 251 EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
AV L ++ + P+ +Y +ING K ++ +A+ LL M RG ++ +
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L + G+ + A+ L ++M + C PN V Y+ ++ GLC +G+ + +++++RMI SG
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC-REGKPNEAKEILNRMIASGCL 429
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ YS L+KG+ + G E +Q+ EM
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 125/245 (51%), Gaps = 12/245 (4%)
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y+ +I G K G E A ++ M KPN++ Y+ +++G C++G+ EAK+ +N M+
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
GC PN TY++++ G G +EA + +M G N + ++ GLC VG+
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR---GLKPTVFSFN 370
+A+ ++ + PD +Y +I G C IG D A+ L EM + +P V ++N
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA-----KGRMQDVEDLV 425
+ L ++ RA+ LL M C P+ ++ NT + L KGR +E+LV
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGR-SFLEELV 603
Query: 426 DRMIR 430
R+++
Sbjct: 604 VRLLK 608
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 7/224 (3%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y+ L+ L + + A + ++ E P++ Y+ ++ G C+ G AK++ + M
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMA-EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
PN Y++++ GF K G EEA + EM GC N+ Y+ +I GLC GRV
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM---EANMNPDVKSY 334
EA M+ +KM G K + + S++KGLC +G D A+ ++ E PDV +Y
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
++++G C A+ LL M RG P V + N L E
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 117/253 (46%), Gaps = 36/253 (14%)
Query: 110 IAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAI-FWFHQAKQIENGACL---YSYNSLL 165
IA+ L N+ + S L+K + G + A+ W K+++ C + Y+ L+
Sbjct: 424 IASGCLPNA-----YTYSSLMKGFFKTGLCEEAVQVW----KEMDKTGCSRNKFCYSVLI 474
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK-- 223
L V +K A + +++ + PD Y+++I+G C +G ++ A K++ M +
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGI-KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 533
Query: 224 ----PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC-INGRVD 278
P+++ YN +++G C + ++ A +N M++RGC P+ +T N + L + D
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCD 593
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+ + + ++ + K + + G C + + ++ + P ++ +++
Sbjct: 594 KGRSFLEELVVRLLK------RQRVSGACTI---------VEVMLGKYLAPKTSTWAMIV 638
Query: 339 NGFCKIGKSDEAI 351
CK K + AI
Sbjct: 639 REICKPKKINAAI 651
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 181/364 (49%), Gaps = 28/364 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
++K + G ++ A F ++ ++ A L SYN L LVR AE Q+ +
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
+ P + +Y ++ G CK+GM+ +AK + +M V P+ + Y +++G+C G+++ A
Sbjct: 357 -IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAA 415
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
K + EMM C PN T N +++ L GR+ EA+ L+ KM G+ + T ++ G
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Query: 306 LCVVGKFDQAV--------------GYLRN---------VMEANMNPDVKSYEVVINGFC 342
LC G+ D+A+ G L N ++E N PD+ +Y ++NG C
Sbjct: 476 LCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLC 535
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K G+ EA +L EM L+P ++N + G++ A +LK M + C +
Sbjct: 536 KAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLE 595
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
+YN++I GL + K ++ ++ L+D M G + + Y+ ++ CE VE+ + E
Sbjct: 596 TYNSLILGLGI-KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDE 654
Query: 463 MVTK 466
M+ K
Sbjct: 655 MMQK 658
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 174/373 (46%), Gaps = 68/373 (18%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN+++ R +E+ ++ +E +VP D+ T+ + I CK G + +A ++F M
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVP-DIVTFNSRISALCKEGKVLDASRIFSDM 278
Query: 221 TV-------KPNLLAYNTMINGFCKKGELEEAK--------------------------- 246
+ +PN + YN M+ GFCK G LE+AK
Sbjct: 279 ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVR 338
Query: 247 --------KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVST 298
+ +M ++G P+ +YN ++ GLC G + +AK ++ M+ NG + T
Sbjct: 339 HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ +L G C VGK D A L+ +M N P+ + ++++ K+G+ EA LL++M
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 359 ARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP-----------------------QM 395
+G + N + L +GELD+AI ++K M +
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+CLP+ ++Y+T++ GLC A GR + ++L M+ D Y+ + +C++G + +
Sbjct: 519 NCLPDLITYSTLLNGLCKA-GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577
Query: 456 VMQIAHEMVTKKG 468
++ +M KKG
Sbjct: 578 AFRVLKDM-EKKG 589
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 159/364 (43%), Gaps = 29/364 (7%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
L+ Y G V AA + + Y+ N LL L ++ I AEE ++ E
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM-NEK 460
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK------------------------- 223
D T ++ G C G ++ A ++ M V
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 224 -PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P+L+ Y+T++NG CK G EAK EMM +P+ + YN I+ C G++ A
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
++ M G ++ T+ S++ GL + + + G + + E ++P++ +Y I C
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ K ++A +LL EM + + P VFSF + + + D A + + + C
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEG 699
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHE 462
Y+ + L +A G++ +L++ ++ G L +Y L++ C++ +E I H+
Sbjct: 700 LYSLMFNEL-LAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHK 758
Query: 463 MVTK 466
M+ +
Sbjct: 759 MIDR 762
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 150/330 (45%), Gaps = 10/330 (3%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205
F + +G L + ++ +LVR + +E + I+ ++ +S+ +++ +
Sbjct: 27 FSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFA 86
Query: 206 KMGMIENAKKVFDVMTV-----KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
K I+ A F ++ KP++ YN ++ K+ +E +M+ G P
Sbjct: 87 KSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQ 146
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
T+N +I LC + VD A+ L +M G K N T +++G C G D+ + L
Sbjct: 147 TYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLN 206
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ + P+ Y +++ FC+ G++D++ ++++MR GL P + +FN+ L + G
Sbjct: 207 AMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266
Query: 381 ELDRAILLLKQMPQMDCL----PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
++ A + M + L PN ++YN ++ G C G ++D + L + + +
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV-GLLEDAKTLFESIRENDDLAS 325
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+G G + +M K
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDK 355
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 11/235 (4%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
I + +G + +A F K +E C L +YNSL+ L N I ++
Sbjct: 565 FIHHFCKQGKISSA---FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM- 620
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGEL 242
KE + P++ TY T I+ C+ +E+A + D M + PN+ ++ +I FCK +
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDF 680
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
+ A++ ++ C E Y+ M L G++ +A L+ + GF+ +K +
Sbjct: 681 DMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDL 739
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
++ LC + + A G L +++ D + VI+G K+G EA S +M
Sbjct: 740 VESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 174/377 (46%), Gaps = 41/377 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
SK++ N I FH + G LYSYN ++ L R + +A +++K
Sbjct: 73 SKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK 132
Query: 187 ENVVP----------------------------------PDVSTYTTMIRGYCKMGMIEN 212
P PDV Y T+I G CK+G++ +
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 192
Query: 213 AKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 269
A ++FD M V+ + + YN+++ G C G +A + M +M+ R PN +T+ A+I
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 270 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 329
G+ EA L +M +V T+ S++ GLC+ G+ D+A L ++ P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
DV +Y +INGFCK + DE L +EM RGL ++N + + + G D A +
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 449
+M D PN +Y+ ++ GLCM R++ L + M +S LD T Y+ ++ G C+
Sbjct: 373 SRM---DSRPNIRTYSILLYGLCM-NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 450 EGNVENVMQIAHEMVTK 466
GNVE+ + + K
Sbjct: 429 IGNVEDAWDLFRSLSCK 445
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 136/243 (55%), Gaps = 7/243 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +++ V V+ A + + ++ + V PDV TY ++I G C G ++ AK++ D+
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRR-CVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ YNT+INGFCK ++E K EM RG + +TYN +I G GR
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+ + ++M + N+ T+ +L GLC+ + ++A+ N+ ++ + D+ +Y +
Sbjct: 365 PDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI+G CKIG ++A L + + +GLKP V S+ + + D++ LL ++M +
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 397 CLP 399
LP
Sbjct: 482 LLP 484
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 180/378 (47%), Gaps = 20/378 (5%)
Query: 88 YHHTTPC--------YTAITDVLLSHSLISIAASLLKNSNKLSD----FFISKLIKAYGD 135
+HH C Y + + L S IA S++ K +S LI +
Sbjct: 92 FHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ 151
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
V AI + +++ + YN+++ ++ + A E F ++ ++ V D
Sbjct: 152 GNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV-RADAV 210
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY +++ G C G +A ++ M ++ PN++ + +I+ F K+G+ EA K EM
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
R P+ TYN++I GLC++GRVDEAK ++ M G +V T+ +++ G C +
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
D+ R + + + D +Y +I G+ + G+ D A + M +R P + +++ +
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSIL 387
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L N +++A++L + M + + + +YN +I G+C G ++D DL + G
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI-GNVEDAWDLFRSLSCKG 446
Query: 433 HNLDFTMYSCLLKGYCEE 450
D Y+ ++ G+C +
Sbjct: 447 LKPDVVSYTTMISGFCRK 464
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
LEE +M+ P+ + ++ ++ + + D L M + G ++ ++
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ LC +F A+ + +M+ PDV + +INGFC+ + +AI L+ +M G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+P V +N + + G ++ A+ L +M + + V+YN+++ GLC + GR D
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS-GRWSDA 228
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
L+ M+ + ++ ++ + +EG M++ EM +
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 165/313 (52%), Gaps = 5/313 (1%)
Query: 157 CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
CL ++N LL VL + +K E+ +++K V+ P++ TY I+G C+ G ++ A ++
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVL-PNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 217 FDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
+ KP+++ YN +I G CK + +EA+ + +M+N G P+ TYN +I G C
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G V A+ ++ NGF + T++S++ GLC G+ ++A+ + + P+V
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I G G EA L EM +GL P V +FN + L + G + A L+K M
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
P+ ++N +I G + +M++ +++D M+ +G + D Y+ LL G C+
Sbjct: 454 SKGYFPDIFTFNILIHGYS-TQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 454 ENVMQIAHEMVTK 466
E+VM+ MV K
Sbjct: 513 EDVMETYKTMVEK 525
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 213/485 (43%), Gaps = 84/485 (17%)
Query: 58 VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN 117
VT VI Q +P AL FN + HT Y ++ + L + +L +
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEV----GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVD 65
Query: 118 -----SNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
N + + +K YG +G V+ A+ F + + ++SYN+++ VLV
Sbjct: 66 MRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSG 125
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAY 229
A + + ++ ++ + PDV ++T ++ +CK A ++ + M+ + N++AY
Sbjct: 126 YFDQAHKVYMRM-RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 230 NTMINGF-----------------------------------CKKGELEEAKKCMNEMMN 254
T++ GF CKKG+++E +K +++++
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
RG PN TYN I GLC G +D A ++ + G K +V T+ +++ GLC KF +
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCK------------------------------- 343
A YL ++ + PD +Y +I G+CK
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Query: 344 ----IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP 399
G+++ A++L E +G+KP V +N + + L G + A L +M + +P
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIP 424
Query: 400 NFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 459
++N ++ GLC G + D + LV MI G+ D ++ L+ GY + +EN ++I
Sbjct: 425 EVQTFNILVNGLC-KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 460 AHEMV 464
M+
Sbjct: 484 LDVML 488
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 155/312 (49%), Gaps = 6/312 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+YN+L+ + ++LAE V VP D TY ++I G C G A +F+
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP-DQFTYRSLIDGLCHEGETNRALALFN 380
Query: 219 VM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+KPN++ YNT+I G +G + EA + NEM +G P T+N ++ GLC G
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
V +A L+ M G+ ++ T ++ G K + A+ L +++ ++PDV +Y
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++NG CK K ++ + K M +G P +F+FN + L +LD A+ LL++M
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFT-MYSCLLKGYCEEGNVE 454
P+ V++ T+I G C G + L +M + T Y+ ++ + E+ NV
Sbjct: 561 SVNPDAVTFGTLIDGFC-KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVT 619
Query: 455 NVMQIAHEMVTK 466
++ EMV +
Sbjct: 620 MAEKLFQEMVDR 631
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 163/329 (49%), Gaps = 6/329 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y SL+ L A F++ + + + P+V Y T+I+G GMI A ++ +
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGI-KPNVILYNTLIKGLSNQGMILEAAQLAN 415
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M+ K P + +N ++NG CK G + +A + M+++G P+ T+N +I+G
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
+++ A ++ M NG +V T+ S+L GLC KF+ + + ++E P++ ++
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+++ C+ K DEA+ LL+EM+ + + P +F + +NG+LD A L ++M +
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+ + II K + E L M+ D Y ++ G+C+ GNV
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL 655
Query: 456 VMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
+ EM+ + G + L L RV++ L
Sbjct: 656 GYKFLLEMM-ENGFIPSLTT-LGRVINCL 682
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 42/287 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N L+ L ++ + A+ ++ + P D+ T+ +I GY +ENA ++ DV
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFP-DIFTFNILIHGYSTQLKMENALEILDV 486
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P++ YN+++NG CK + E+ + M+ +GC PN T+N ++ LC +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN---------- 326
+DEA L+ +M+ + T +++ G C G D A R + EA
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Query: 327 --------------------------MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+ PD +Y ++++GFCK G + L EM
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
G P++ + V L + A ++ +M Q +P V NTI
Sbjct: 667 GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTI 711
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L+++N LL L R + A ++ K V PD T+ T+I G+CK G ++ A +F
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEM-KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 218 DVMT----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
M V + YN +I+ F +K + A+K EM++R P+ TY M+ G C
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
G V+ + +M NGF +++T ++ LCV + +A G + +++ + P+
Sbjct: 650 TGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE--- 706
Query: 334 YEVVINGFCKIGKSDEA 350
+N C + K + A
Sbjct: 707 ---AVNTICDVDKKEVA 720
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 180/377 (47%), Gaps = 40/377 (10%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+KL+ A I + +++E LY+YN L+ R + I LA +++K
Sbjct: 89 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
P + T ++++ GYC I +A + D M +P+ + + T+I+G +
Sbjct: 149 LG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCING---------------------------- 275
EA ++ M+ RGC+PN +TY ++ GLC G
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 276 -------RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
VD+A L +M G + NV T+ S++ LC G++ A L +++E +N
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 388
P++ ++ +I+ F K GK EA L +M R + P +F++N++ + LD+A +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 389 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 448
+ M DC P+ V+YNT+I G C +K R++D +L M G D Y+ L++G
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSK-RVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 449 EEGNVENVMQIAHEMVT 465
+G+ +N ++ +MV+
Sbjct: 447 HDGDCDNAQKVFKQMVS 463
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 140/254 (55%), Gaps = 4/254 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++N+L+ V+ AE+ + ++K ++ PD+ TY +++ G+C ++ AK++F
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI-DPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K P+++ YNT+I GFCK +E+ + EM +RG + +TY +I GL +
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A+ + +M +G ++ T+ +L GLC GK ++A+ + ++ + D+ Y
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G CK GK D+ L + +G+KP V ++N + L L A LLK+M +
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 395 MDCLPNFVSYNTII 408
LPN +YNT+I
Sbjct: 569 DGPLPNSGTYNTLI 582
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L A + ++ E + P++ T+ +I + K G A+K++D
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ P++ YN+++NGFC L++AK+ M+++ C P+ +TYN +I G C + R
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L +M G + T+ ++++GL G D A + ++ + PD+ +Y +
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G C GK ++A+ + M+ +K ++ + + + + G++D L +
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V+YNT+I GLC +K +Q+ L+ +M G + Y+ L++ + +G+
Sbjct: 536 VKPNVVTYNTMISGLC-SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAAS 594
Query: 457 MQIAHEM 463
++ EM
Sbjct: 595 AELIREM 601
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 156/301 (51%), Gaps = 5/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y ++ L + LA +++ + + DV + T+I CK +++A +F
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++PN++ Y+++I+ C G +A + +++M+ + PN +T+NA+I
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+ EA+ L M ++ T+ S++ G C+ + D+A ++ + PDV +Y
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I GFCK + ++ L +EM RGL ++ + + L +G+ D A + KQM
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ ++Y+ ++ GLC G+++ ++ D M +S LD +Y+ +++G C+ G V+
Sbjct: 464 DGVPPDIMTYSILLDGLC-NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 455 N 455
+
Sbjct: 523 D 523
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 157/309 (50%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N LL + ++ + ++ + +V + TY +I +C+ I A + M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG-LYTYNILINCFCRRSQISLALALLGKM 146
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+P+++ ++++NG+C + +A +++M+ G RP+ +T+ +I+GL ++ +
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L+ +M G + N+ T+ ++ GLC G D A+ L + A + DV + +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ CK D+A++L KEM +G++P V +++++ L G A LL M +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN V++N +I + +G+ + E L D MI+ + D Y+ L+ G+C ++
Sbjct: 327 NPNLVTFNALIDAF-VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 458 QIAHEMVTK 466
Q+ MV+K
Sbjct: 386 QMFEFMVSK 394
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 147/297 (49%), Gaps = 19/297 (6%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV----------MTVKPNLLAY 229
F +VK +P + + ++ KM K FDV + + L Y
Sbjct: 72 LFGGMVKSRPLPS-IVEFNKLLSAIAKM-------KKFDVVISLGEKMQRLEIVHGLYTY 123
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +IN FC++ ++ A + +MM G P+ +T ++++ G C R+ +A L+ +M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G++ + T +++ GL + K +AV + +++ P++ +Y VV+NG CK G +D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
A++LL +M A ++ V FN + L + +D A+ L K+M PN V+Y+++I
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC + GR D L+ MI N + ++ L+ + +EG ++ +M+ +
Sbjct: 304 CLC-SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 5/231 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + ++ E F ++ +V D TYTT+I+G G +NA+KVF
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+++ Y+ +++G C G+LE+A + + M + + Y MI G+C G+
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+ L + L G K NV T+ +M+ GLC +A L+ + E P+ +Y
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 580
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L++EMR+ + V +L +G LD++ L
Sbjct: 581 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKSFL 630
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L++A M+ P+ + +N ++ + + D L KM+ + T+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ C + A+ L +M+ P + + ++NG+C + +A++L+ +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G +P +F + L + + A+ L+ +M Q C PN V+Y ++ GLC +G
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC-KRGDTDL 243
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+L+++M + D +++ ++ C+ +V++ + + EM TK R
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 158 bits (400), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 146/264 (55%), Gaps = 10/264 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ V+ + AE+ + +++K ++ PD+ TY+++I G+C ++ AK +F++
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ YNT+I GFCK +EE + EM RG N +TYN +I GL G
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+ + KM +G ++ T+ +L GLC GK ++A+ + ++ M PD+ +Y +
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK GK ++ L + +G+KP V + + G + A L ++M +
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 397 CLPNFVSYNTIICGLCMAKGRMQD 420
LPN +YNT+I + R++D
Sbjct: 566 TLPNSGTYNTLI------RARLRD 583
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 172/346 (49%), Gaps = 40/346 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LYSYN L+ R + + LA +++K PD+ T ++++ GYC I A +
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGY-EPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 218 D---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D VM +PN + +NT+I+G + EA ++ M+ RGC+P+ TY ++ GLC
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 275 GRVDEAKMLMAKMR---------------------------LN--------GFKDNVSTH 299
G +D A L+ KM LN G + NV T+
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S+++ LC G++ A L +++E +NP+V ++ +I+ F K GK EA L EM
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
R + P +F+++++ + LD A + + M DC PN V+YNT+I G C AK R++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK-RVE 412
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ +L M + G + Y+ L++G + G+ + +I +MV+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 194/406 (47%), Gaps = 14/406 (3%)
Query: 70 HALFFFNWASNPNPNPNKY--HHTTP---CYTAITDVLLSHSLISIAASLLKNSNK---L 121
H LF N AS ++ P Y + + L I +A SLLK K
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 122 SDFFI-SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
+D I + +I A + NV A+ F + + +YNSL+ L A
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFC 237
++ E + P+V T++ +I + K G + A+K++D M ++ P++ Y+++INGFC
Sbjct: 313 LSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
L+EAK M+++ C PN +TYN +I G C RV+E L +M G N
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++++GL G D A + ++ + PD+ +Y ++++G CK GK ++A+ + + +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
+ ++P ++++N + + + G+++ L + PN + Y T+I G C KG
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC-RKGL 550
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ + L M G + Y+ L++ +G+ ++ EM
Sbjct: 551 KEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 166/329 (50%), Gaps = 7/329 (2%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTM 200
A+ F + Q + +N LL + ++N L ++ +N+ + D+ +Y +
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM--QNLRISYDLYSYNIL 121
Query: 201 IRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGC 257
I +C+ + A V M +P+++ ++++NG+C + EA +++M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 258 RPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVG 317
+PN +T+N +I+GL ++ + EA L+ +M G + ++ T+ +++ GLC G D A+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 318 YLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILV 377
L+ + + + DV Y +I+ C ++A++L EM +G++P V ++N++ R L
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 378 ENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDF 437
G A LL M + PN V+++ +I + +G++ + E L D MI+ + D
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAF-VKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
YS L+ G+C ++ + M++K
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISK 389
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 5/231 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + ++ E F ++ + +V V TY T+I+G + G + A+K+F
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+++ Y+ +++G CK G+LE+A + P+ TYN MI G+C G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L + L G K NV + +M+ G C G ++A R + E P+ +Y
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L+KEMR+ G + + V +L +G L+++ L
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSYL 625
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 117/244 (47%), Gaps = 1/244 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ +N +++ K + + M N + +YN +I C ++ A +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ KM G++ ++ T S+L G C + +AV + + P+ ++ +I+G
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
K+ EA++L+ M ARG +P +F++ V L + G++D A+ LLK+M + + V
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y TII LC K + D +L M G + Y+ L++ C G + ++ +M
Sbjct: 258 YTTIIDALCNYKN-VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 464 VTKK 467
+ +K
Sbjct: 317 IERK 320
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L++A EM+ P+ + +N ++ + + D L +M+ ++ ++
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ C + A+ L +M+ PD+ + ++NG+C + EA++L+ +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
+P +FN + L + + A+ L+ +M C P+ +Y T++ GLC +G +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC-KRGDIDL 238
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
L+ +M + D +Y+ ++ C NV + + + EM K R
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 147/266 (55%), Gaps = 10/266 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++++L+ V+ + AE+ + ++VK ++ P + TY+++I G+C ++ AK++F
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K P+++ YNT+I GFCK +EE + EM RG N +TYN +I GL
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A+ + +M +G N+ T+ ++L GLC GK ++A+ + + M P + +Y
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I G CK GK ++ L + +G+KP V ++N + G + A L K+M +
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQD 420
LPN YNT+I + R++D
Sbjct: 565 DGTLPNSGCYNTLI------RARLRD 584
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 169/341 (49%), Gaps = 5/341 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
SKL+ A I Q + + Y+Y+ L+ R + + LA +++
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGEL 242
K P++ T ++++ GYC I A + D M V +PN + +NT+I+G +
Sbjct: 144 KLGY-EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA ++ M+ +GC+P+ +TY ++ GLC G D A L+ KM + V + ++
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC D A+ + + + P+V +Y +I+ C G+ +A LL +M R +
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P VF+F+A+ V+ G+L A L +M + P+ V+Y+++I G CM R+ + +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM-HDRLDEAK 381
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ + M+ D Y+ L+KG+C+ VE M++ EM
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 162/307 (52%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L A ++ E + PDV T++ +I + K G + A+K++D
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ P+++ Y+++INGFC L+EAK+ M+++ C P+ +TYN +I G C R
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V+E + +M G N T+ +++GL G D A + ++ + P++ +Y
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G CK GK ++A+ + + ++ ++PT++++N + + + G+++ L +
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ V+YNT+I G C KG ++ + L M G + Y+ L++ +G+ E
Sbjct: 532 VKPDVVAYNTMISGFC-RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 457 MQIAHEM 463
++ EM
Sbjct: 591 AELIKEM 597
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 144/277 (51%), Gaps = 4/277 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKC 248
P+ T+ T+I G A + D M K P+L+ Y ++NG CK+G+ + A
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+N+M P L YN +I GLC +D+A L +M G + NV T+ S++ LC
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
G++ A L +++E +NPDV ++ +I+ F K GK EA L EM R + P++ +
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
++++ + LD A + + M C P+ V+YNT+I G C K R+++ ++ M
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREM 422
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ G + Y+ L++G + G+ + +I EMV+
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 160/310 (51%), Gaps = 7/310 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ LL + ++N + Q+ +N+ +P + TY+ +I +C+ + A V
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQM--QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +PN++ ++++NG+C + EA +++M G +PN +T+N +I+GL ++ +
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
EA L+ +M G + ++ T+ ++ GLC G D A L + + + P V Y
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G CK D+A++L KEM +G++P V +++++ L G A LL M +
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ +++ +I + +G++ + E L D M++ + YS L+ G+C ++
Sbjct: 322 INPDVFTFSALIDAF-VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 457 MQIAHEMVTK 466
Q+ MV+K
Sbjct: 381 KQMFEFMVSK 390
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 158/301 (52%), Gaps = 5/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y ++ L + LA +++ ++ + P V Y T+I G CK +++A +F
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++PN++ Y+++I+ C G +A + +++M+ R P+ T++A+I
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G++ EA+ L +M ++ T+ S++ G C+ + D+A ++ + PDV +Y
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I GFCK + +E + + +EM RGL ++N + + L + G+ D A + K+M
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN ++YNT++ GLC G+++ + + + RS Y+ +++G C+ G VE
Sbjct: 460 DGVPPNIMTYNTLLDGLC-KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 455 N 455
+
Sbjct: 519 D 519
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 166/341 (48%), Gaps = 17/341 (4%)
Query: 136 RGNVKA-----AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKL--AEEFFHQIVKEN 188
RGN + FW ++ +G Y Y L ++ +KL A F ++VK
Sbjct: 22 RGNAATVSPSFSFFW----RRAFSGKTSYDYREKLS-RNGLSELKLDDAVALFGEMVKSR 76
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P + ++ ++ KM + + + M + N Y+ +IN FC++ +L A
Sbjct: 77 PFPS-IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLA 135
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +MM G PN +T ++++ G C + R+ EA L+ +M + G++ N T +++ G
Sbjct: 136 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
L + K +A+ + ++ PD+ +Y VV+NG CK G +D A +LL +M L+P
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 255
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V +N + L + +D A+ L K+M PN V+Y+++I LC GR D L+
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-NYGRWSDASRLL 314
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI N D +S L+ + +EG + ++ EMV +
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 148/335 (44%), Gaps = 44/335 (13%)
Query: 95 YTAITDVLLSHSLISIAASLLKN--SNKLSD--FFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+++ L ++ S A+ LL + K++ F S LI A+ G + A + +
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +Y+SL+ + + A++ F +V ++ P DV TY T+I+G+CK +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP-DVVTYNTLIKGFCKYKRV 412
Query: 211 ENAKKVFDVMT--------------------------------------VKPNLLAYNTM 232
E +VF M+ V PN++ YNT+
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
++G CK G+LE+A + P TYN MI G+C G+V++ L + L G
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
K +V + +M+ G C G ++A + + E P+ Y +I + G + +
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 592
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
L+KEMR+ G + V +L +G LD++ L
Sbjct: 593 LIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSFL 626
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 171/350 (48%), Gaps = 40/350 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+ + ++ R + LA +I+K PD T++T+I G C G + A ++
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGY-EPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 218 DVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY---------- 264
D M KP L+ N ++NG C G++ +A ++ M+ G +PNE+TY
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 265 -------------------------NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
+ +I GLC +G +D A L +M + GFK ++ +
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++++G C G++D LR++++ + PDV ++ +I+ F K GK EA L KEM
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RG+ P ++ ++ + +LD+A +L M C PN ++N +I G C A +
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN-LID 404
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
D +L +M G D Y+ L++G+CE G +E ++ EMV+++ R
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 167/329 (50%), Gaps = 7/329 (2%)
Query: 142 AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMI 201
A+ F + + L ++ L V+ R L + Q+ + + ++ T + MI
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-NLYTLSIMI 114
Query: 202 RGYC---KMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCR 258
C K+ + +A + +P+ + ++T+ING C +G + EA + ++ M+ G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 259 PNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGY 318
P +T NA++ GLC+NG+V +A +L+ +M GF+ N T+ +LK +C G+ A+
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 319 LRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVE 378
LR + E + D Y ++I+G CK G D A +L EM +G K + + + R
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 379 NGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK-GRMQDVEDLVDRMIRSGHNLDF 437
G D LL+ M + P+ V+++ +I C K G++++ E+L MI+ G + D
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALI--DCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 438 TMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+ G+C+E ++ + MV+K
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 183/376 (48%), Gaps = 9/376 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y + V+ ++A LL+ KL S +I G++ A F++ +
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
A + Y +L+ + ++K + P DV ++ +I + K G +
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP-DVVAFSALIDCFVKEGKL 333
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A+++ M + P+ + Y ++I+GFCK+ +L++A ++ M+++GC PN T+N +
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C +D+ L KM L G + T+ ++++G C +GK + A + ++ +
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD+ SY+++++G C G+ ++A+ + +++ ++ + +N + + ++D A
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L +P P+ +YN +I GLC KG + + + L +M GH+ + Y+ L++ +
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLC-KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 448 CEEGNVENVMQIAHEM 463
EG+ ++ E+
Sbjct: 573 LGEGDATKSAKLIEEI 588
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 121/236 (51%), Gaps = 5/236 (2%)
Query: 155 GACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAK 214
G + ++N L+ + N I E F ++ VV D TY T+I+G+C++G +E AK
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGKLEVAK 442
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
++F M V+P++++Y +++G C GE E+A + ++ + YN +I+G+
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C +VD+A L + L G K +V T+ M+ GLC G +A R + E +P+
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+Y ++I G + ++ L++E++ G + V +L +G L ++ L
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSFL 617
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 129/260 (49%), Gaps = 4/260 (1%)
Query: 211 ENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
++A +F MT +P L+ ++ + + + + + +M +G N T + M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I C ++ A M K+ G++ + T +++ GLC+ G+ +A+ + ++E
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
P + + ++NG C GK +A+ L+ M G +P ++ V +++ ++G+ A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
LL++M + + V Y+ II GLC G + + +L + M G D +Y+ L++G+
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLC-KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 448 CEEGNVENVMQIAHEMVTKK 467
C G ++ ++ +M+ +K
Sbjct: 293 CYAGRWDDGAKLLRDMIKRK 312
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 110/239 (46%), Gaps = 15/239 (6%)
Query: 115 LKNSNKLSDFFISK-----------LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNS 163
L +N + D +SK LI Y + + F + A +YN+
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-- 221
L+ + +++A+E F ++V V PD+ +Y ++ G C G E A ++F+ +
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRV-RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 222 -VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
++ ++ YN +I+G C ++++A + +G +P+ TYN MI GLC G + EA
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 339
+L KM +G N T+ +++ G ++ + + + D + ++V++
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+ ++IN C+ K A S + ++ G +P +F+ + L G + A+ L+ +M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
+M P ++ N ++ GLC+ G++ D L+DRM+ +G + Y +LK C+ G
Sbjct: 169 VEMGHKPTLITLNALVNGLCL-NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 453 VENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
M++ +M +K +L +K + ++D L
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSI--IIDGL 257
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 83/172 (48%), Gaps = 2/172 (1%)
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
K VS + + G+ + K D AV + + + P + + + + + + D +
Sbjct: 35 KGKVSYRERLRSGIVDI-KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLD 93
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
L K+M +G+ +++ + + +L A + ++ ++ P+ V+++T+I GLC
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 413 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ +GR+ + +LVDRM+ GH + L+ G C G V + + + MV
Sbjct: 154 L-EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
+SI +LK + I L+ + R V A+ + +I + +YN+++
Sbjct: 140 LSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---P 224
L + + A +FF +I ++ + P+V TYT ++ G C +A ++ M K P
Sbjct: 200 LCKTKRVNDAFDFFKEIERKG-IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N++ Y+ +++ F K G++ EAK+ EM+ P+ +TY+++I GLC++ R+DEA +
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
M G +V ++ +++ G C + + + R + + + + +Y +I GF +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
G D+A +M G+ P ++++N + L +NGEL++A+++ + M + + + V+Y
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
T+I G+C G++++ L + G D Y+ ++ G C +G + V + +M
Sbjct: 439 TTVIRGMCKT-GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 148/277 (53%), Gaps = 13/277 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++LL V+ + A+E F ++V+ ++ PD+ TY+++I G C I+ A ++FD+
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K ++++YNT+INGFCK +E+ K EM RG N +TYN +I G G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A+ ++M G ++ T+ +L GLC G+ ++A+ ++ + M+ D+ +Y
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
VI G CK GK +EA SL + +GLKP + ++ + L G L L +M Q
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
+ N + ++ G + +L+ +M+ G+
Sbjct: 501 LMKNDCT---------LSDGDITLSAELIKKMLSCGY 528
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 155/298 (52%), Gaps = 5/298 (1%)
Query: 170 RVNSIKL--AEEFFHQIVKENVVPP--DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPN 225
R+ IKL A + F +VK P D + + I K ++ + K +V+ ++ +
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 226 LLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
L +N +IN FC ++ A + +M+ G P+ +T +++ G C RV +A L+
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 286 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 345
KM G+K ++ + +++ LC + + A + + + + P+V +Y ++NG C
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 346 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 405
+ +A LL +M + + P V +++A+ V+NG++ A L ++M +M P+ V+Y+
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 406 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++I GLC+ R+ + + D M+ G D Y+ L+ G+C+ VE+ M++ EM
Sbjct: 300 SLINGLCL-HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 144/274 (52%), Gaps = 4/274 (1%)
Query: 193 DVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCM 249
D+ T+ +I +C + A + M +P+ + +++NGFC++ + +A +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 250 NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
++M+ G +P+ + YNA+I LC RV++A ++ G + NV T+ +++ GLC
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
++ A L ++++ + P+V +Y +++ F K GK EA L +EM + P + ++
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+++ L + +D A + M CL + VSYNT+I G C AK R++D L M
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK-RVEDGMKLFREMS 357
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ G + Y+ L++G+ + G+V+ + +M
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L + + K+D + + + + D+ ++ +VIN FC + A+S+L +M G
Sbjct: 91 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 150
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+P + ++ + A+ L+ +M ++ P+ V+YN II LC K R+ D
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK-RVNDA 209
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D + R G + Y+ L+ G C + ++ +M+ KK
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 159/300 (53%), Gaps = 5/300 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L V+ + LA E ++ + N+ D Y+ +I G CK G ++NA +F+
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNI-KLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M +K +++ YNT+I GFC G ++ K + +M+ R PN +T++ +I G+
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L+ +M G N T+ S++ G C + ++A+ + ++ +PD+ ++ +
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ING+CK + D+ + L +EM RG+ ++N + + ++G+L+ A L ++M
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ VSY ++ GLC G ++ ++ ++ +S LD +Y ++ G C V++
Sbjct: 469 VRPDIVSYKILLDGLC-DNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 167/312 (53%), Gaps = 5/312 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N+LL L + A E ++V E P + T T++ G C G + +A + D M
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMV-EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+PN + Y ++N CK G+ A + + +M R + + + Y+ +I GLC +G +
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
D A L +M + GFK ++ T+ +++ G C G++D LR++++ ++P+V ++ V+
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ F K GK EA LLKEM RG+ P ++N++ + L+ AI ++ M C
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
P+ +++N +I G C A R+ D +L M G + Y+ L++G+C+ G +E
Sbjct: 400 DPDIMTFNILINGYCKAN-RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 458 QIAHEMVTKKGR 469
++ EMV+++ R
Sbjct: 459 KLFQEMVSRRVR 470
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 162/320 (50%), Gaps = 8/320 (2%)
Query: 150 KQIENGA---CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
KQ+E+ +Y+ + ++ R + A +I+K PD + T++ G C
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGY-EPDTVIFNTLLNGLCL 170
Query: 207 MGMIENAKKVFDVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
+ A ++ D M KP L+ NT++NG C G++ +A ++ M+ G +PNE+T
Sbjct: 171 ECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVT 230
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y ++ +C +G+ A L+ KM K + + ++ GLC G D A +
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
D+ +Y +I GFC G+ D+ LL++M R + P V +F+ + V+ G+L
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A LLK+M Q PN ++YN++I G C + R+++ +VD MI G + D ++ L
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFC-KENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 444 LKGYCEEGNVENVMQIAHEM 463
+ GYC+ +++ +++ EM
Sbjct: 410 INGYCKANRIDDGLELFREM 429
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 181/376 (48%), Gaps = 9/376 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y + +V+ ++A LL+ KL S +I G++ A F++ +
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
A + +YN+L+G + ++K + P+V T++ +I + K G +
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI-SPNVVTFSVLIDSFVKEGKL 349
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A ++ M + PN + YN++I+GFCK+ LEEA + ++ M+++GC P+ +T+N +
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C R+D+ L +M L G N T+ ++++G C GK + A + ++ +
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD+ SY+++++G C G+ ++A+ + ++ ++ + + + + ++D A
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L +P + +YN +I LC K + + L +M GH D Y+ L++ +
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISELC-RKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Query: 448 CEEGNVENVMQIAHEM 463
+ + ++ EM
Sbjct: 589 LGDDDATTAAELIEEM 604
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 127/245 (51%), Gaps = 1/245 (0%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
+ ++ + MIN FC+ +L A M ++M G P+ + +N ++ GLC+ RV EA
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 341
L+ +M G K + T +++ GLC+ GK AV + ++E P+ +Y V+N
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 342 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 401
CK G++ A+ LL++M R +K ++ + L ++G LD A L +M +
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 402 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
++YNT+I G C A GR D L+ MI+ + + +S L+ + +EG + Q+
Sbjct: 299 ITYNTLIGGFCNA-GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 462 EMVTK 466
EM+ +
Sbjct: 358 EMMQR 362
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 40/299 (13%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI ++ G ++ A + Q +YNSL+ + N ++ A + ++
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ PD+ T+ +I GYCK I++ ++F M+++ N + YNT++ GFC+ G+LE
Sbjct: 397 KGC-DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 244 EAKKCMNEMMNRGCRPNELTYNAM-----------------------------------I 268
AKK EM++R RP+ ++Y + I
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 269 YGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
+G+C +VD+A L + L G K + + M+ LC +A R + E
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PD +Y ++I + A L++EM++ G V + V +L +GELD++ L
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELDKSFL 633
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 118/244 (48%), Gaps = 1/244 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P ++ +N + + K + E +M ++G + T + MI C ++ A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M K+ G++ + ++L GLC+ + +A+ + ++E P + + ++NG C
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GK +A+ L+ M G +P ++ V ++ ++G+ A+ LL++M + + + V
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ II GLC G + + +L + M G D Y+ L+ G+C G ++ ++ +M
Sbjct: 266 YSIIIDGLC-KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 464 VTKK 467
+ +K
Sbjct: 325 IKRK 328
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 1/224 (0%)
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A +M+ P + +N + + + + L +M G ++ T M
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ C K A + +M+ PD + ++NG C + EA+ L+ M G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KPT+ + N + L NG++ A++L+ +M + PN V+Y ++ +C + G+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS-GQTALAM 248
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L+ +M LD YS ++ G C++G+++N + +EM K
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 292 FKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAI 351
F D +++ L V K D AV R+++++ P V + + + K + + +
Sbjct: 49 FSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVL 108
Query: 352 SLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGL 411
+L K+M ++G+ ++++ + + +L A + ++ ++ P+ V +NT++ GL
Sbjct: 109 ALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL 168
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
C+ + R+ + +LVDRM+ GH + L+ G C G V + + + MV
Sbjct: 169 CL-ECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ + ++IN FC+ K A S + ++ G +P FN + L + A+ L+
Sbjct: 123 IYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD 182
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M +M P ++ NT++ GLC+ G++ D L+DRM+ +G + Y +L C+
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCL-NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 451 GNVENVMQIAHEMVTKKGRLLKLK 474
G M++ +M + +L +K
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVK 265
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 191/412 (46%), Gaps = 44/412 (10%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ + D+ + A S L KLS + + LI + G++ AA + +
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMI 464
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +Y SL+G I A +H++ + + P + T+TT++ G + G+I
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS-IYTFTTLLSGLFRAGLI 523
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+A K+F+ M VKPN + YN MI G+C++G++ +A + + EM +G P+ +Y +
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I+GLC+ G+ EAK+ + + + N + +L G C GK ++A+ + +++ +
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ D+ Y V+I+G K LLKEM RGLKP + ++ + G+ A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM---------IRSGHNLDF- 437
+ M C+PN V+Y +I GLC A G + + E L +M + G LD
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKA-GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL 762
Query: 438 -------------------------TMYSCLLKGYCEEGNVENVMQIAHEMV 464
Y+ L++G+C +G +E ++ M+
Sbjct: 763 TKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 166/346 (47%), Gaps = 42/346 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENA----KK 215
+Y +L+ L +V ++ E +++ P + + ++++ G K G IE A K+
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV-SSLVEGLRKRGKIEEALNLVKR 357
Query: 216 VFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
V D V PNL YN +I+ CK + EA+ + M G RPN++TY+ +I C G
Sbjct: 358 VVD-FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++D A + +M G K +V + S++ G C G A G++ ++ + P V +Y
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF----NAVFRI---------------- 375
++ G+C GK ++A+ L EM +G+ P++++F + +FR
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 376 ---------------LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
E G++ +A LK+M + +P+ SY +I GLC+ G+ +
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT-GQASE 595
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ VD + + L+ Y+ LL G+C EG +E + + EMV +
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 42/343 (12%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I+ Y + G++ A + + + YSY L+ L A+ F + K N
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT--------------------------- 221
++ YT ++ G+C+ G +E A V M
Sbjct: 608 CELNEIC-YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLF 666
Query: 222 -----------VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+KP+ + Y +MI+ K G+ +EA + M+N GC PNE+TY A+I G
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD-QAVGYLRNVMEANMNP 329
LC G V+EA++L +KM+ N T+ L L G+ D Q L N + +
Sbjct: 727 LCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGEVDMQKAVELHNAILKGLLA 785
Query: 330 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 389
+ +Y ++I GFC+ G+ +EA L+ M G+ P ++ + L ++ +AI L
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 390 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
M + P+ V+YNT+I G C+A G M +L + M+R G
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVA-GEMGKATELRNEMLRQG 887
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 175/415 (42%), Gaps = 79/415 (19%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ L+ Y +G + A+ +H+ +Y++ +LL L R I+ A + F+++ +
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
NV P V TY MI GYC+ G + A + MT K P+ +Y +I+G C G+
Sbjct: 536 WNVKPNRV-TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA----------------------- 280
EAK ++ + C NE+ Y +++G C G+++EA
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 281 ---------KM---LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMN 328
K+ L+ +M G K + + SM+ G F +A G ++
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 329 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD--RAI 386
P+ +Y VING CK G +EA L +M+ P ++ IL + GE+D +A+
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAV 773
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC---- 442
L + + L N +YN +I G C +GR+++ +L+ RMI G + D Y+
Sbjct: 774 ELHNAILK-GLLANTATYNMLIRGFC-RQGRIEEASELITRMIGDGVSPDCITYTTMINE 831
Query: 443 -------------------------------LLKGYCEEGNVENVMQIAHEMVTK 466
L+ G C G + ++ +EM+ +
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 145/290 (50%), Gaps = 4/290 (1%)
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
F ++ + + P+V T + ++ G K A ++F+ M ++P++ Y +I C
Sbjct: 179 FKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLC 238
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+ +L AK+ + M GC N + YN +I GLC +V EA + + K +V
Sbjct: 239 ELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ +++ GLC V +F+ + + ++ +P + ++ G K GK +EA++L+K +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
G+ P +F +NA+ L + + A LL +M ++ PN V+Y+ +I C +G+
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFC-RRGK 417
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ + M+ +G L Y+ L+ G+C+ G++ EM+ KK
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 159/342 (46%), Gaps = 40/342 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+ ++LL LV+ LA E F+ +V + PDV YT +IR C++ + AK++
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGI-RPDVYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 220 MTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI--- 273
M N++ YN +I+G CKK ++ EA ++ + +P+ +TY ++YGLC
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 274 --------------------------------NGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
G+++EA L+ ++ G N+ + +
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ LC KF +A + + + P+ +Y ++I+ FC+ GK D A+S L EM G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
LK +V+ +N++ + G++ A + +M P V+Y +++ G C +KG++
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC-SKGKINKA 491
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
L M G ++ LL G G + + +++ +EM
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y S++ + K A + ++ E VP +V TYT +I G CK G + A+ + M
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV-TYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 221 ---TVKPNLLAYNTMINGFCKKGELEEAKKC-MNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ PN + Y ++ KGE++ K ++ + +G N TYN +I G C GR
Sbjct: 744 QPVSSVPNQVTYGCFLD-ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++EA L+ +M +G + T+ +M+ LC +A+ ++ E + PD +Y
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKP 364
+I+G C G+ +A L EM +GL P
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 160 SYNSLLGVLVRVN-SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+Y L +L + ++ A E + I+K + + +TY +IRG+C+ G IE A ++
Sbjct: 754 TYGCFLDILTKGEVDMQKAVELHNAILKG--LLANTATYNMLIRGFCRQGRIEEASELIT 811
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M V P+ + Y TMIN C++ ++++A + N M +G RP+ + YN +I+G C+ G
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKS 301
+ +A L +M G N T ++
Sbjct: 872 EMGKATELRNEMLRQGLIPNNKTSRT 897
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 170/348 (48%), Gaps = 40/348 (11%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+ + ++ R + LA +I+K P+ T++T+I G C G + A ++
Sbjct: 123 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGY-EPNTITFSTLINGLCLEGRVSEALELV 181
Query: 218 DVMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT----------- 263
D M KP+L+ NT++NG C G+ EA +++M+ GC+PN +T
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 264 ------------------------YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
Y+ +I GLC +G +D A L +M + G N+ T+
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
++ G C G++D LR++++ +NP+V ++ V+I+ F K GK EA L KEM
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
RG+ P ++ ++ + LD+A ++ M C PN ++N +I G C A R+
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN-RID 420
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D +L +M G D Y+ L++G+CE G + ++ EMV++K
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 149/280 (53%), Gaps = 5/280 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+++ L+ V+ ++ AEE +++ + P D TYT++I G+CK ++ A ++ D+
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAP-DTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN+ +N +ING+CK +++ + +M RG + +TYN +I G C G+
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ AK L +M N+ T+K +L GLC G+ ++A+ + ++ M D+ Y +
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C K D+A L + +G+KP V ++N + L + G L A LL ++M +
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
P+ +YN +I + G L++ + R G ++D
Sbjct: 574 HAPDGWTYNILIRAH-LGDGDATKSVKLIEELKRCGFSVD 612
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 155/330 (46%), Gaps = 40/330 (12%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +L V+ + LA E ++ + N+ D Y+ +I G CK G ++NA +F+
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNI-KLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 220 MTVK---PNLLAYNTMINGFC-----------------------------------KKGE 241
M +K N++ YN +I GFC K+G+
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
L EA++ EM++RG P+ +TY ++I G C +D+A ++ M G N+ T
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
++ G C + D + R + + D +Y +I GFC++GK + A L +EM +R
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P + ++ + L +NGE ++A+ + +++ + + YN II G+C A ++ D
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA-SKVDDA 527
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
DL + G Y+ ++ G C++G
Sbjct: 528 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 147/292 (50%), Gaps = 3/292 (1%)
Query: 177 AEEFFHQIVKENVVPP--DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMIN 234
A + F ++ +P D S + I + ++ K ++ + NL + MIN
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
FC+ +L A M +++ G PN +T++ +I GLC+ GRV EA L+ +M G K
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
++ T +++ GLC+ GK +A+ + ++E P+ +Y V+N CK G++ A+ LL
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
++M R +K ++ + L ++G LD A L +M N ++YN +I G C A
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
GR D L+ MI+ N + +S L+ + +EG + ++ EM+ +
Sbjct: 312 -GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 5/233 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++N L+ + N I E F ++ VV D TY T+I+G+C++G + AK++F
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGKLNVAKELF 461
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V PN++ Y +++G C GE E+A + ++ + YN +I+G+C
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+VD+A L + L G K V T+ M+ GLC G +A R + E PD +Y
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
++I G + +++ L++E++ G + V +L +G L ++ L
Sbjct: 582 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKSFL 633
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 121/244 (49%), Gaps = 1/244 (0%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P ++ ++ + + K + + +M +G N T + MI C ++ A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
M K+ G++ N T +++ GLC+ G+ +A+ + ++E PD+ + ++NG C
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 403
GK EA+ L+ +M G +P ++ V ++ ++G+ A+ LL++M + + + V
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 404 YNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
Y+ II GLC G + + +L + M G + Y+ L+ G+C G ++ ++ +M
Sbjct: 266 YSIIIDGLC-KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 464 VTKK 467
+ +K
Sbjct: 325 IKRK 328
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 1/224 (0%)
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
++A +M++ P + ++ + + + D L +M L G N+ T M
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ C K A + +++ P+ ++ +ING C G+ EA+ L+ M G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
KP + + N + L +G+ A+LL+ +M + C PN V+Y ++ +C + G+
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS-GQTALAM 248
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L+ +M LD YS ++ G C+ G+++N + +EM K
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
+ F D +++ L+ V K D A+ R+++ + P V + + + K + D
Sbjct: 46 FSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYD 105
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTII 408
++L K+M +G+ +++ + + +L A + ++ ++ PN ++++T+I
Sbjct: 106 LVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLI 165
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
GLC+ +GR+ + +LVDRM+ GH D + L+ G C G M + +MV
Sbjct: 166 NGLCL-EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 155/280 (55%), Gaps = 5/280 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ V V+ + A+E +++++ + P D TY ++I G+CK + A ++FD+
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAP-DTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ Y+ +IN +CK +++ + E+ ++G PN +TYN ++ G C +G+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
++ AK L +M G +V T+ +L GLC G+ ++A+ + ++ M + Y +
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C K D+A SL + +G+KP V ++N + L + G L A +L ++M +
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
C P+ +YN +I G + VE L++ M G + D
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVE-LIEEMKVCGFSAD 594
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 169/331 (51%), Gaps = 5/331 (1%)
Query: 139 VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
V AI F Q +N L + R L F + + N + D+ T T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGM-ELNGIEHDMYTMT 109
Query: 199 TMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNR 255
MI YC+ + A V + +P+ + ++T++NGFC +G + EA ++ M+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 256 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 315
RP+ +T + +I GLC+ GRV EA +L+ +M GF+ + T+ +L LC G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 316 VGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
+ R + E N+ V Y +VI+ CK G D+A+SL EM +G+K V +++++
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 376 LVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL 435
L +G+ D +L++M + +P+ V+++ +I + + +G++ + ++L + MI G
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI-DVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 436 DFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ L+ G+C+E + Q+ MV+K
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 169/330 (51%), Gaps = 5/330 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
GN A+ F + ++ A + Y+ ++ L + S A F+++ + + DV T
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI-KADVVT 282
Query: 197 YTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y+++I G C G ++ K+ M + P+++ ++ +I+ F K+G+L EAK+ NEM+
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG P+ +TYN++I G C + EA + M G + ++ T+ ++ C + D
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ R + + P+ +Y ++ GFC+ GK + A L +EM +RG+ P+V ++ +
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L +NGEL++A+ + ++M + YN II G+C A ++ D L + G
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS-KVDDAWSLFCSLSDKGV 521
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D Y+ ++ G C++G++ + +M
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 159/352 (45%), Gaps = 76/352 (21%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
PD T++T++ G+C G + A + D M +P+L+ +T+ING C KG + EA
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 249 MNEMMNRGCRPNELTY-----------------------------------NAMIYGLCI 273
++ M+ G +P+E+TY + +I LC
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+G D+A L +M + G K +V T+ S++ GLC GK+D LR ++ N+ PDV +
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV----------------FRILV 377
+ +I+ F K GK EA L EM RG+ P ++N++ F ++V
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 378 ENG-------------------ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRM 418
G +D + L +++ +PN ++YNT++ G C + G++
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS-GKL 436
Query: 419 QDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
++L M+ G Y LL G C+ G + ++I +M +K R+
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM--QKSRM 486
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 40/266 (15%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNSL+ + N + A + F +V + PD+ TY+ +I YCK +++ ++F
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGC-EPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY------------ 264
++ K PN + YNT++ GFC+ G+L AK+ EM++RG P+ +TY
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 265 -----------------------NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
N +I+G+C +VD+A L + G K +V T+
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
M+ GLC G +A R + E PD +Y ++I ++ L++EM+ G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 362 LKPTVFSFNAVFRILVENGELDRAIL 387
+ V +L + LD++ L
Sbjct: 591 FSADSSTIKMVIDMLSDR-RLDKSFL 615
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 115 LKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLY-------------SY 161
L +N++ D +SK + D I + +AK++++G L+ +Y
Sbjct: 366 LHEANQMFDLMVSKGCEP--DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221
N+L+ + + A+E F ++V V PP V TY ++ G C G + A ++F+ M
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGV-PPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 222 VKPNLLA---YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
L YN +I+G C ++++A + ++G +P+ +TYN MI GLC G +
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKG 305
EA ML KM+ +G + T+ +++
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRA 569
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 180/369 (48%), Gaps = 5/369 (1%)
Query: 98 ITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC 157
++D++ + + ++K+ S +KL+ A + I Q + +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+Y+ + R + + LA +++K PD+ T ++++ GYC I +A +
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M KP+ + T+I+G + EA +++M+ RGC+P+ +TY ++ GLC
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D A L+ KM + +V + +++ GLC D A+ + + PDV +Y
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+ C G+ +A LL +M R + P V +F+A+ V+ G+L A L +M +
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ +Y+++I G CM R+ + + + + MI + YS L+KG+C+ VE
Sbjct: 357 RSIDPDIFTYSSLINGFCM-HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 455 NVMQIAHEM 463
M++ EM
Sbjct: 416 EGMELFREM 424
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 144/264 (54%), Gaps = 10/264 (3%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ V+ + AE+ + +++K ++ PD+ TY+++I G+C ++ AK +F++
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ Y+T+I GFCK +EE + EM RG N +TY +I+G
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+M+ +M G N+ T+ +L GLC GK +A+ + + M PD+ +Y +
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK GK ++ L + +G+ P V ++N + G + A LLK+M +
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 397 CLPNFVSYNTIICGLCMAKGRMQD 420
LPN +YNT+I + R++D
Sbjct: 569 PLPNSGTYNTLI------RARLRD 586
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 179/331 (54%), Gaps = 5/331 (1%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG++ A+ + ++ + A + YN+++ L + + A F ++ + + PDV
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI-RPDVF 294
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY+++I C G +A ++ M + PN++ ++ +I+ F K+G+L EA+K +EM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ R P+ TY+++I G C++ R+DEAK + M NV T+ +++KG C +
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
++ + R + + + + +Y +I+GF + D A + K+M + G+ P + ++N +
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L +NG+L +A+++ + + + P+ +YN +I G+C A G+++D +L + G
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA-GKVEDGWELFCNLSLKG 533
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ + Y+ ++ G+C +G+ E + +M
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 161/309 (52%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+N LL + ++N +L Q+ + + D+ TY+ I +C+ + A V M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQM-QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+P+++ ++++NG+C + +A +++M+ G +P+ T+ +I+GL ++ +
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
EA L+ +M G + ++ T+ +++ GLC G D A+ L+ + + + DV Y +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G CK D+A++L EM +G++P VF+++++ L G A LL M +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN V+++ +I + +G++ + E L D MI+ + D YS L+ G+C ++
Sbjct: 325 NPNVVTFSALIDAF-VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 458 QIAHEMVTK 466
+ M++K
Sbjct: 384 HMFELMISK 392
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 173/332 (52%), Gaps = 19/332 (5%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK-------NSNKLSD 123
AL F N P+ + Y+++ L ++ S A+ LL N N ++
Sbjct: 277 ALNLFTEMDNKGIRPDVF-----TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT- 330
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
S LI A+ G + A + + + +++Y+SL+ + + A+ F
Sbjct: 331 --FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKG 240
++ ++ P +V TY+T+I+G+CK +E ++F M+ + N + Y T+I+GF +
Sbjct: 389 MISKDCFP-NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ + A+ +M++ G PN LTYN ++ GLC NG++ +A ++ ++ + + ++ T+
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
M++G+C GK + N+ ++P+V +Y +I+GFC+ G +EA SLLK+M+
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
G P ++N + R + +G+ + + L+K+M
Sbjct: 568 GPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 5/231 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++L+ + ++ E F ++ + +V V TYTT+I G+ + +NA+ VF
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V PN+L YN +++G CK G+L +A + P+ TYN MI G+C G+
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L + L G NV + +M+ G C G ++A L+ + E P+ +Y
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + + L+KEMR+ G + V +L +G LD++ L
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSFL 628
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
E++ N I K D+A+ L +M P++ FN + + + + + I L +QM
Sbjct: 52 EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ + +Y+ I C + ++ ++ +M++ G+ D S LL GYC +
Sbjct: 112 LGISHDLYTYSIFINCFC-RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 455 NVMQIAHEMV 464
+ + + +MV
Sbjct: 171 DAVALVDQMV 180
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 173/336 (51%), Gaps = 8/336 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEF 180
F + L+K D + A+ H G + SY +++ + A
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+H+++ ++P DV TY ++I CK ++ A +V + M V P+ + YN++++G+C
Sbjct: 219 YHEMLDRGILP-DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
G+ +EA + +M + G P+ +TY+ ++ LC NGR EA+ + M G K ++
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T+ ++L+G G + G L ++ ++PD + ++I + K GK D+A+ + +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
R +GL P ++ AV IL ++G ++ A+L +QM P + YN++I GLC +
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN-K 456
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ E+L+ M+ G L+ ++ ++ +C+EG V
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 158/307 (51%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YNS+L K A F ++ + + V PDV TY+ ++ CK G A+K+FD
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
MT +KP + Y T++ G+ KG L E ++ M+ G P+ ++ +I G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
VD+A ++ +KMR G N T+ +++ LC G+ + A+ Y +++ ++P Y
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I+G C K + A L+ EM RG+ FN++ + G + + L + M ++
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN ++YNT+I G C+A G+M + L+ M+ G + YS L+ GYC+ +E+
Sbjct: 507 VKPNVITYNTLINGYCLA-GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 457 MQIAHEM 463
+ + EM
Sbjct: 566 LVLFKEM 572
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 164/314 (52%), Gaps = 6/314 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKE--NVVPPDVSTYTTMIRGYCKMGMIENAKK 215
++SYN LL L N + A E H + + PPDV +YTT+I G+ K G + A
Sbjct: 158 VFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 216 VFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 272
+ M + P+++ YN++I CK +++A + +N M+ G P+ +TYN++++G C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 273 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 332
+G+ EA + KMR +G + +V T+ ++ LC G+ +A ++ + + P++
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 333 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+Y ++ G+ G E LL M G+ P + F+ + + G++D+A+L+ +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 393 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 452
Q PN V+Y +I LC + GR++D ++MI G + +Y+ L+ G C
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKS-GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 453 VENVMQIAHEMVTK 466
E ++ EM+ +
Sbjct: 457 WERAEELILEMLDR 470
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 215/463 (46%), Gaps = 57/463 (12%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P Y Y ++ H L+ + +++N + S LI AY +G V A
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
+ F + +Q +Y +++G+L + ++ A +F Q++ E + P ++ Y ++I
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI-VYNSLIH 449
Query: 203 G-----------------------------------YCKMGMIENAKKVFDVMT---VKP 224
G +CK G + ++K+F++M VKP
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N++ YNT+ING+C G+++EA K ++ M++ G +PN +TY+ +I G C R+++A +L
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M +G ++ T+ +L+GL + A + E+ ++ +Y ++++G CK
Sbjct: 570 KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629
Query: 345 GKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY 404
+D+A+ + + + LK +FN + L++ G D A L +PN+ +Y
Sbjct: 630 KLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
Query: 405 NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ + + +G +++++ L M +G +D M + +++ + G +
Sbjct: 690 RLMAENI-IGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE-----------I 737
Query: 465 TKKGRLLKL---KNFLTRVVDALLLMWIVTGGSWISRFVFVHQ 504
T+ G L + K+F A L + +++GG + + F+ +
Sbjct: 738 TRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFLPE 780
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 163/367 (44%), Gaps = 56/367 (15%)
Query: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV--VPPDVSTYTTMIRG 203
F + + GA +Y N L + R +S A ++++ + V PD+ TY +I
Sbjct: 38 FDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIGC 96
Query: 204 YCKMGMIENA--------KKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKK-CMNEMMN 254
C+ G ++ KK F V + +A+ ++ G C +A + M
Sbjct: 97 CCRAGRLDLGFAALGNVIKKGFRV-----DAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR-----------------LNGFKD--- 294
GC PN +YN ++ GLC R EA L+ M +NGF
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 295 ------------------NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+V T+ S++ LC D+A+ L +++ + PD +Y
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G+C G+ EAI LK+MR+ G++P V +++ + L +NG A + M +
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P +Y T++ G KG + ++ L+D M+R+G + D ++S L+ Y ++G V+
Sbjct: 332 LKPEITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 457 MQIAHEM 463
M + +M
Sbjct: 391 MLVFSKM 397
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 37/143 (25%)
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ PD+ +Y ++I C+ G+ D + L + +G + +F + +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK------------ 130
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV-DRMIRSGHNLDFTMYSCLLK 445
GLC K R D D+V RM G + Y+ LLK
Sbjct: 131 -----------------------GLCADK-RTSDAMDIVLRRMTELGCIPNVFSYNILLK 166
Query: 446 GYCEEGNVENVMQIAHEMVTKKG 468
G C+E + +++ H M +G
Sbjct: 167 GLCDENRSQEALELLHMMADDRG 189
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 165/305 (54%), Gaps = 6/305 (1%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
++Y++++ L R ++ A F + + + P V ++ +++ GYCK+G ++ AK F
Sbjct: 230 HTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 288
Query: 219 VMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
+ + P++ ++N +ING C G + EA + ++M G P+ +TYN + G + G
Sbjct: 289 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 348
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD-VKSY 334
+ A ++ M G +V T+ +L G C +G D + L++++ + +
Sbjct: 349 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 408
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
V+++G CK G+ DEA+SL +M+A GL P + +++ V L + G+ D A+ L +M
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
LPN ++ ++ GLC KG + + L+D +I SG LD +Y+ ++ GY + G +E
Sbjct: 469 KRILPNSRTHGALLLGLC-QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 527
Query: 455 NVMQI 459
+++
Sbjct: 528 EALEL 532
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 136/282 (48%), Gaps = 5/282 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP----NLLAYNTMINGFCKKGELEEA 245
+ PDV TYT ++ G C++G I+ + M + +++ + M++G CK G ++EA
Sbjct: 365 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 424
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
N+M G P+ + Y+ +I+GLC G+ D A L +M N TH ++L G
Sbjct: 425 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 484
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G +A L +++ + D+ Y +VI+G+ K G +EA+ L K + G+ P+
Sbjct: 485 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 544
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V +FN++ + + A +L + P+ VSY T++ G + +++L
Sbjct: 545 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC-GNTKSIDELR 603
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
M G YS + KG C EN + E + +K
Sbjct: 604 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 645
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 168/346 (48%), Gaps = 19/346 (5%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G + A+ F+Q K L +Y+ ++ L ++ +A + ++ + ++P + T
Sbjct: 419 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP-NSRT 477
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMM 253
+ ++ G C+ GM+ A+ + D + +++ YN +I+G+ K G +EEA + ++
Sbjct: 478 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 537
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G P+ T+N++IYG C + EA+ ++ ++L G +V ++ +++ G
Sbjct: 538 ETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN-T 596
Query: 314 QAVGYLRNVMEA-NMNPDVKSYEVVINGFCKIGKSDEAISLLKE------------MRAR 360
+++ LR M+A + P +Y V+ G C+ K + +L+E M +
Sbjct: 597 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 656
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G+ P ++N + + L L A + L+ M + + +YN +I LC+ G ++
Sbjct: 657 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY-GYIRK 715
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+ + + +L Y+ L+K +C +G+ E +++ H+++ +
Sbjct: 716 ADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 761
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 144/314 (45%), Gaps = 32/314 (10%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
YN ++ + I+ A E F ++V E + P V+T+ ++I GYCK I A+K+ DV+
Sbjct: 513 YNIVIDGYAKSGCIEEALELF-KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 571
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC----- 272
+ P++++Y T+++ + G + + EM G P +TY+ + GLC
Sbjct: 572 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 631
Query: 273 ------INGRV-DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 325
+ R+ ++ K + M G + T+ ++++ LC V A +L +
Sbjct: 632 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 691
Query: 326 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRA 385
N++ +Y ++I+ C G +A S + ++ + + + F++ + + G+ + A
Sbjct: 692 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 751
Query: 386 ILLLKQMPQMDCLPNFVSYNTIICGLC---------------MAKGRMQDVEDLVDRMIR 430
+ L Q+ + Y+ +I LC +++G D+ D+ + MI+
Sbjct: 752 VKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL-DICEVMIK 810
Query: 431 SGHNLDFTMYSCLL 444
S L +T+ LL
Sbjct: 811 SDELLSWTIKWGLL 824
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 116/237 (48%), Gaps = 9/237 (3%)
Query: 228 AYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM 287
+YN+++ F + ++ + K + + NE TY+ ++ GLC ++++A + +
Sbjct: 203 SYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTS 255
Query: 288 RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKS 347
+V + S++ G C +G D A + V++ + P V S+ ++ING C +G
Sbjct: 256 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 315
Query: 348 DEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTI 407
EA+ L +M G++P ++N + + G + A +++ M P+ ++Y +
Sbjct: 316 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 375
Query: 408 ICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM-YSCLLKGYCEEGNVENVMQIAHEM 463
+CG C G + L+ M+ G L+ + S +L G C+ G ++ + + ++M
Sbjct: 376 LCGQCQL-GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 431
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N T+ +++ GLC K + AV +LR ++ P V S+ +++G+CK+G D A S
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 287
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICG---L 411
+ GL P+V+S N + L G + A+ L M + P+ V+YN + G L
Sbjct: 288 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 347
Query: 412 CMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M G + + D++D+ G + D Y+ LL G C+ GN++ + + +M+++
Sbjct: 348 GMISGAWEVIRDMLDK----GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 398
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 20/238 (8%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-- 217
SY +L+ + K +E ++ E + P +V TY+ + +G C+ EN V
Sbjct: 582 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV-TYSVIFKGLCRGWKHENCNHVLRE 640
Query: 218 -------------DVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY 264
+ + P+ + YNT+I C+ L A + M +R + TY
Sbjct: 641 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 700
Query: 265 NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME 324
N +I LC+ G + +A + ++ + + +++K CV G + AV ++
Sbjct: 701 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 760
Query: 325 ANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 382
N ++ Y VIN C+ +E+ M ++G+ P + + +++++ EL
Sbjct: 761 RGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL----DICEVMIKSDEL 814
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 91 TTPCYTAITDVLLSHSLI----SIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWF 146
++ Y + D L + I S SL + + LS F + LIKA+ +G+ + A+ F
Sbjct: 696 SSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLF 755
Query: 147 HQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIR 202
HQ + Y++++ L R + + ++ FF ++ + + PD+ MI+
Sbjct: 756 HQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQG-ISPDLDICEVMIK 810
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 188/378 (49%), Gaps = 42/378 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI+ + D G + F + + + C +YN+L+ ++ +K A E F ++
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI- 309
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E V P+V TYT +I G C +G + A ++ ++M K PN + YN +IN CK G +
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA-KMLMAKMRLNGFKD-NVSTHKS 301
+A + + M R RP+ +TYN ++ GLC G +DEA K+L ++ + + D +V ++ +
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 302 MLKGLC-----------------------------------VVGKFDQAVGYLRNVMEAN 326
++ GLC G ++A+ + + ++
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 327 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 386
+ + +Y +I+GFCK G + A LL +MR L+P+VF +N + L + G LD+A
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 387 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 446
L ++M + + P+ VS+N +I G + G ++ E L+ M R+G + D YS L+
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDG-SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 447 YCEEGNVENVMQIAHEMV 464
+ + G ++ + +MV
Sbjct: 609 FLKLGYLDEAISFFDKMV 626
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 180/364 (49%), Gaps = 41/364 (11%)
Query: 139 VKAAIFWFHQAKQIENGACL-YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS-- 195
+K A+ F QA +++G+ L ++ N+L+ LVR + +LA F+ ++++ + VS
Sbjct: 54 LKNAVSVFQQA--VDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 196 --------------------------------TYTTMIRGYCKMGMIENAKKVFDVM--- 220
+ +++G C+ A + M
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 221 TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
++ P++ +YNT+I GFC+ ELE+A + NEM GC + +T+ +I C G++DEA
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+ +M+ G + ++ + S+++G C G+ D+ V+E +P +Y +I G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
FCK+G+ EA + + M RG++P V+++ + L G+ A+ LL M + D PN
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+YN II LC G + D ++V+ M + D Y+ LL G C +G+++ ++
Sbjct: 352 AVTYNIIINKLC-KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 461 HEMV 464
+ M+
Sbjct: 411 YLML 414
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 166/316 (52%), Gaps = 7/316 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+Y++N LL L R A ++ + N + PDV +Y T+IRG+C+ +E A ++
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREM-RRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +L+ + +I+ FCK G+++EA + EM G + + Y ++I G C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +D K L ++ G T+ ++++G C +G+ +A ++E + P+V +Y
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G C +GK+ EA+ LL M + +P ++N + L ++G + A+ +++ M +
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR--SGHNLDFTMYSCLLKGYCEEGN 452
P+ ++YN ++ GLC AKG + + L+ M++ S + D Y+ L+ G C+E
Sbjct: 381 RRTRPDNITYNILLGGLC-AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Query: 453 VENVMQIAHEMVTKKG 468
+ + I +V K G
Sbjct: 440 LHQALDIYDLLVEKLG 455
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 175/343 (51%), Gaps = 13/343 (3%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI A+ G + A+ + + K + A L Y SL+ + + F ++++
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
P + TY T+IRG+CK+G ++ A ++F+ M V+PN+ Y +I+G C G+ +EA
Sbjct: 278 DSPCAI-TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +N M+ + PN +TYN +I LC +G V +A ++ M+ + + T+ +L G
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 306 LCVVGKFDQAVGYLRNVMEAN--MNPDVKSYEVVINGFCKIGKSDEAI---SLLKEMRAR 360
LC G D+A L +++ + +PDV SY +I+G CK + +A+ LL E
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G + T N + ++ G++++A+ L KQ+ + N +Y +I G C G +
Sbjct: 457 GDRVTT---NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT-GMLNV 512
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ L+ +M S Y+CLL C+EG+++ ++ EM
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 138/311 (44%), Gaps = 45/311 (14%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKEN-VVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+YN LLG L + A + + ++K++ PDV +Y +I G CK + A ++D
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 219 VMT--------VKPNLL------------------------------AYNTMINGFCKKG 240
++ V N+L Y MI+GFCK G
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKM-RLNGFKDNVSTH 299
L AK + +M +P+ YN ++ LC G +D+A L +M R N F D VS +
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
M+ G G A L + A ++PD+ +Y +IN F K+G DEAIS +M
Sbjct: 569 -IMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
G +P ++V + + GE D+ L+K++ D + + T++ +C + M
Sbjct: 628 SGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANM- 686
Query: 420 DVEDLVDRMIR 430
DL R++R
Sbjct: 687 ---DLAKRLLR 694
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 42/317 (13%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN ++ L + + A E +++K+ PD TY ++ G C G ++ A K+ +
Sbjct: 354 TYNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 220 MT-----VKPNLLAYNTMINGFCKKGELEEA---------------KKCMNEMMNRGCRP 259
M P++++YN +I+G CK+ L +A + N ++N +
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 260 NEL--------------------TYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
++ TY AMI G C G ++ AK L+ KMR++ + +V +
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+L LC G DQA + N PDV S+ ++I+G K G A SLL M
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
GL P +F+++ + ++ G LD AI +M P+ ++++ C+++G
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL-KYCISQGETD 651
Query: 420 DVEDLVDRMIRSGHNLD 436
+ +LV +++ LD
Sbjct: 652 KLTELVKKLVDKDIVLD 668
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 36/219 (16%)
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING-- 340
++A M GF NV H +LKGLC + +AV LR + ++ PDV SY VI G
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188
Query: 341 ---------------------------------FCKIGKSDEAISLLKEMRARGLKPTVF 367
FCK GK DEA+ LKEM+ GL+ +
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+ ++ R + GELDR L ++ + P ++YNT+I G C G++++ ++ +
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL-GQLKEASEIFEF 307
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI G + Y+ L+ G C G + +Q+ + M+ K
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 153/292 (52%), Gaps = 6/292 (2%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
+F Q ++ + D+ ++T +I +C+ + A V M +P+++ + ++++GF
Sbjct: 92 YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGF 151
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C + +A + M+ G PN + YN +I GLC NG ++ A L+ +M G +V
Sbjct: 152 CLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV 211
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
T+ ++L GLC G++ A LR++M+ ++NPDV ++ +I+ F K G DEA L KE
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M + P ++N++ L +G L A M C PN V+YNT+I G C K
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC--KF 329
Query: 417 RMQDVE-DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
RM D L RM G N D Y+ L+ GYC+ G + + I MV+++
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 158/294 (53%), Gaps = 5/294 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF-DV 219
YN+L+ L + + +A E +++ K+ + DV TY T++ G C G +A ++ D+
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGL-GADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 220 M--TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
M ++ P+++ + +I+ F K+G L+EA++ EM+ PN +TYN++I GLC++GR+
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+AK M G NV T+ +++ G C D+ + + + N D+ +Y +
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+G+C++GK A+ + M +R + P + + + L NGE++ A++ M + +
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
V+YN +I GLC A +++ +L R+ G D Y+ ++ G C+ G
Sbjct: 418 YIGIVAYNIMIHGLCKAD-KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 129/238 (54%), Gaps = 4/238 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +L+ V V+ ++ A+E + ++++ +V P +V TY ++I G C G + +AKK FD+
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV-TYNSIINGLCMHGRLYDAKKTFDL 306
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ YNT+I+GFCK ++E K M G + TYN +I+G C G+
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ A + M ++ TH +L GLCV G+ + A+ ++ E+ + +Y +
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+G CK K ++A L + G+KP ++ + L +NG A L+++M +
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 122/239 (51%), Gaps = 4/239 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI + +GN+ A + + Q +YNS++ L + A++ F +
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
+ P +V TY T+I G+CK M++ K+F M+ + ++ YNT+I+G+C+ G+L
Sbjct: 310 KGCFP-NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A M++R P+ +T+ +++GLC+NG ++ A + MR + + + M+
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI 428
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
GLC K ++A + + PD ++Y ++I G CK G EA L++ M+ G+
Sbjct: 429 HGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 124/280 (44%), Gaps = 49/280 (17%)
Query: 219 VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVD 278
++T NL Y T+I F +K EL G + ++ +I+ C R+
Sbjct: 77 LLTATANLRRYETVIY-FSQKMEL------------YGISHDLYSFTILIHCFCRCSRLS 123
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV---------GYLRNVMEAN--- 326
A ++ KM G++ ++ T S+L G C+V + A GY NV+ N
Sbjct: 124 FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI 183
Query: 327 -----------------------MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+ DV +Y ++ G C G+ +A +L++M R +
Sbjct: 184 DGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P V +F A+ + V+ G LD A L K+M Q PN V+YN+II GLCM GR+ D +
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM-HGRLYDAKK 302
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
D M G + Y+ L+ G+C+ V+ M++ M
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 234 NGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFK 293
GF E+A EM++ P+ + + ++ R + KM L G
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 294 DNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISL 353
++ + ++ C + A+ L +M+ P + ++ +++GFC + + +A SL
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 354 LKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCM 413
+ M G +P V +N + L +NGEL+ A+ LL +M + + V+YNT++ GLC
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 414 AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
+ GR D ++ M++ N D ++ L+ + ++GN++ ++ EM+
Sbjct: 224 S-GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 192/408 (47%), Gaps = 40/408 (9%)
Query: 98 ITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC 157
++D++ + + ++K+ S +KL+ A + I Q + +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
LY+Y+ + R + + LA +++K PD+ T ++++ GYC I +A +
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGY-EPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
D M KP+ + T+I+G + EA +++M+ RGC+P+ +TY ++ GLC
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 275 GRVDEA-----KMLMAKMRLN------------------------------GFKDNVSTH 299
G +D A KM A+++ N G + NV T+
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
S++ LC G++ A L N++E +NP+V ++ +I+ F K GK EA L +EM
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQ 419
R + P ++N + + LD A + K M DCLPN +YNT+I G C K R++
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK-RVE 415
Query: 420 DVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
D +L M + G + Y+ +++G+ + G+ ++ + +MV+ +
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 170/334 (50%), Gaps = 12/334 (3%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
RG++ A+ ++ + A + +N+++ L + +++A + F ++ + + P+V
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI-RPNVV 294
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
TY ++I C G +A ++ M + PN++ +N +I+ F K+G+L EA+K EM
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ R P+ +TYN +I G C++ R+DEAK + M N+ T+ +++ G C +
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+ V R + + + + +Y +I GF + G D A + K+M + + + +++ +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L G+LD A+++ K + + + N YNT+I G+C A G++ + DL +
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA-GKVGEAWDLFCSL---S 530
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
D Y+ ++ G C + ++Q A ++ K
Sbjct: 531 IKPDVVTYNTMISGLCS----KRLLQEADDLFRK 560
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 130/252 (51%), Gaps = 7/252 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+L+ + + AE+ ++++ ++ PD TY +I G+C ++ AK++F
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSI-DPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN+ YNT+INGFCK +E+ + EM RG N +TY +I G G
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+M+ +M N ++ T+ +L GLC GK D A+ + + ++ M ++ Y
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK GK EA L + +KP V ++N + L L A L ++M +
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 397 CLPNFVSYNTII 408
LPN +YNT+I
Sbjct: 566 TLPNSGTYNTLI 577
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ +I+ + G+ +A F Q + +Y+ LL L + A F + K
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAK 246
+ ++ Y TMI G CK G + A +F +++KP+++ YNTMI+G C K L+EA
Sbjct: 497 SEM-ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+M G PN TYN +I + + L+ +MR +GF + ST S++ +
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST-ISLVTNM 614
Query: 307 CVVGKFDQA 315
G+ D++
Sbjct: 615 LHDGRLDKS 623
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
E++ N I K D+A+ L +M P++ FN + + + + + I L +QM
Sbjct: 52 EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
+ + +Y+ I C + ++ ++ +M++ G+ D S LL GYC +
Sbjct: 112 LGISHDLYTYSIFINCFC-RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 455 NVMQIAHEMV 464
+ + + +MV
Sbjct: 171 DAVALVDQMV 180
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 173/330 (52%), Gaps = 5/330 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G+ A+ + ++ A +++Y++++ L R I A F ++ + + V T
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI-KSSVVT 265
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y +++RG CK G + + M + PN++ +N +++ F K+G+L+EA + EM+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
RG PN +TYN ++ G C+ R+ EA ++ M N ++ T S++KG C+V + D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+ RN+ + + + +Y +++ GFC+ GK A L +EM + G+ P V ++ +
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L +NG+L++A+ + + + + V Y TII G+C G+++D +L + G
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG-GKVEDAWNLFCSLPCKGV 504
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ Y+ ++ G C++G++ + +M
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 168/322 (52%), Gaps = 8/322 (2%)
Query: 150 KQIE-NGAC--LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCK 206
KQ+E NG +Y+ N ++ R A +++K PD +T+ T+I+G
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTLIKGLFL 170
Query: 207 MGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELT 263
G + A + D M +P+++ YN+++NG C+ G+ A + +M R + + T
Sbjct: 171 EGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFT 230
Query: 264 YNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM 323
Y+ +I LC +G +D A L +M G K +V T+ S+++GLC GK++ L++++
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 324 EANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELD 383
+ P+V ++ V+++ F K GK EA L KEM RG+ P + ++N + L
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 384 RAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL 443
A +L M + C P+ V++ ++I G CM K R+ D + + + G + YS L
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK-RVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 444 LKGYCEEGNVENVMQIAHEMVT 465
++G+C+ G ++ ++ EMV+
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVS 431
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 157/293 (53%), Gaps = 3/293 (1%)
Query: 177 AEEFFHQIVKENVVPP--DVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMIN 234
A F ++++ +P D S + + I + ++ + K ++ + N+ N MIN
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 235 GFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKD 294
FC+ + A + ++M G P+ T+N +I GL + G+V EA +L+ +M NG +
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+V T+ S++ G+C G A+ LR + E N+ DV +Y +I+ C+ G D AISL
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
KEM +G+K +V ++N++ R L + G+ + LLLK M + +PN +++N ++ + +
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL-DVFVK 310
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+G++Q+ +L MI G + + Y+ L+ GYC + + + MV K
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 185/376 (49%), Gaps = 9/376 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLK---NSNKLSDFFI-SKLIKAYGDRGNVKAAIFWFHQAK 150
Y +I + + S+A LL+ N +D F S +I + G + AAI F + +
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + +YNSL+ L + +V +V P+V T+ ++ + K G +
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV-PNVITFNVLLDVFVKEGKL 314
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
+ A +++ M + PN++ YNT+++G+C + L EA ++ M+ C P+ +T+ ++
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
I G C+ RVD+ + + G N T+ +++G C GK A + ++ +
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
PDV +Y ++++G C GK ++A+ + ++++ + + + + + + G+++ A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 447
L +P PN ++Y +I GLC KG + + L+ +M G+ + Y+ L++ +
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLC-KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 448 CEEGNVENVMQIAHEM 463
+G++ ++ EM
Sbjct: 554 LRDGDLTASAKLIEEM 569
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 166/349 (47%), Gaps = 9/349 (2%)
Query: 95 YTAITDVLLSHSLISIAASLLKNSN----KLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y+ I D L I A SL K K S + L++ G
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
E + ++N LL V V+ ++ A E + +++ + P++ TY T++ GYC +
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI-SPNIITYNTLMDGYCMQNRL 349
Query: 211 ENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAM 267
A + D+M P+++ + ++I G+C +++ K + RG N +TY+ +
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 268 IYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANM 327
+ G C +G++ A+ L +M +G +V T+ +L GLC GK ++A+ ++ ++ M
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 328 NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+ + Y +I G CK GK ++A +L + +G+KP V ++ + L + G L A +
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 388 LLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
LL++M + PN +YNT+I + G + L++ M G + D
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAH-LRDGDLTASAKLIEEMKSCGFSAD 577
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 117/233 (50%), Gaps = 5/233 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
+ ++ SL+ V + + F I K +V V TY+ +++G+C+ G I+ A+++F
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV-TYSILVQGFCQSGKIKLAEELF 426
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V P+++ Y +++G C G+LE+A + ++ + Y +I G+C
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+V++A L + G K NV T+ M+ GLC G +A LR + E P+ +Y
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L++EM++ G S V +L+ +GELD++ L
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDKSFL 598
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 38/154 (24%)
Query: 346 KSDEAISLLKEM-RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP----------- 393
K D+AI+L +EM R+R L P++ F+ F + + + + KQ+
Sbjct: 68 KKDDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 394 --QMDCL----------------------PNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
++C P+ ++NT+I GL + +G++ + LVDRM+
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFL-EGKVSEAVVLVDRMV 185
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+G D Y+ ++ G C G+ + + +M
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 169/340 (49%), Gaps = 5/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + R + A+ + ++ + + +SLL I A Q+V E
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-EM 109
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEA 245
PD T+TT+I G A + D M +PNL+ Y ++NG CK+G+++ A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+N+M + + +N +I LC VD+A L +M G + NV T+ S++
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC G++ A L +++E +NP++ ++ +I+ F K GK EA L +M R + P
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+F++N++ + LD+A + + M DC P+ +YNT+I G C +K R++D +L
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK-RVEDGTELF 348
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
M G D Y+ L++G +G+ +N ++ +MV+
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 138/254 (54%), Gaps = 4/254 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++N+L+ V+ AE+ ++K ++ PD+ TY ++I G+C ++ AK++F
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI-DPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K P+L YNT+I GFCK +E+ + EM +RG + +TY +I GL +
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G D A+ + +M +G ++ T+ +L GLC GK ++A+ + ++ + D+ Y
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I G CK GK D+ L + +G+KP V ++N + L L A LLK+M +
Sbjct: 434 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Query: 395 MDCLPNFVSYNTII 408
LP+ +YNT+I
Sbjct: 494 DGPLPDSGTYNTLI 507
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 158/307 (51%), Gaps = 5/307 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y+SL+ L A + ++ E + P++ T+ +I + K G A+K+ D
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Query: 220 M---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M ++ P++ YN++INGFC L++AK+ M+++ C P+ TYN +I G C + R
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L +M G + T+ ++++GL G D A + ++ + PD+ +Y +
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+++G C GK ++A+ + M+ +K ++ + + + + G++D L +
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
PN V+YNT+I GLC +K +Q+ L+ +M G D Y+ L++ + +G+
Sbjct: 461 VKPNVVTYNTMISGLC-SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 519
Query: 457 MQIAHEM 463
++ EM
Sbjct: 520 AELIREM 526
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 157/301 (52%), Gaps = 5/301 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +Y ++ L + I LA +++ + + DV + T+I CK +++A +F
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M ++PN++ Y+++I+ C G +A + +++M+ + PN +T+NA+I
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+ EA+ L M ++ T+ S++ G C+ + D+A ++ + PD+ +Y
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I GFCK + ++ L +EM RGL ++ + + L +G+ D A + KQM
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
P+ ++Y+ ++ GLC G+++ ++ D M +S LD +Y+ +++G C+ G V+
Sbjct: 389 DGVPPDIMTYSILLDGLC-NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 455 N 455
+
Sbjct: 448 D 448
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 158/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++ +N LL + ++ L ++ + + ++ TY +I +C+ I A +
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI-SHNLYTYNILINCFCRRSQISLALALL 68
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M +P+++ ++++NG+C + +A +++M+ G RP+ +T+ +I+GL ++
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+ EA L+ +M G + N+ T+ ++ GLC G D A L + A + DV +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
+I+ CK D+A++L KEM +G++P V +++++ L G A LL M +
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN V++N +I + +G+ + E L D MI+ + D Y+ L+ G+C ++
Sbjct: 249 KKINPNLVTFNALIDAF-VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 455 NVMQIAHEMVTK 466
Q+ MV+K
Sbjct: 308 KAKQMFEFMVSK 319
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 5/233 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN+L+ + ++ E F ++ +V D TYTT+I+G G +NA+KVF
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M V P+++ Y+ +++G C G+LE+A + + M + + Y MI G+C
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+VD+ L + L G K NV T+ +M+ GLC +A L+ + E PD +Y
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L++EMR+ + V +L +G LD++ L
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKSFL 555
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
+L + + KFD + + ++ ++ +Y ++IN FC+ + A++LL +M G
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+P++ + +++ + A+ L+ QM +M P+ +++ T+I GL + + V
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
LVDRM++ G + Y ++ G C+ G+++ + ++M K
Sbjct: 136 A-LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 168/322 (52%), Gaps = 11/322 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG---MIENAK 214
++++N ++ L + + A + + K P+V +Y T+I GYCK+G + A
Sbjct: 223 VFTFNVVINALCKTGKMNKARDVMEDM-KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 215 KVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 271
V M V PNL +N +I+GF K L + K EM+++ +PN ++YN++I GL
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 272 CINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDV 331
C G++ EA + KM G + N+ T+ +++ G C +A+ +V P
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401
Query: 332 KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ 391
+ Y ++I+ +CK+GK D+ +L +EM G+ P V ++N + L NG ++ A L Q
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 392 MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ LP+ V+++ ++ G C KG + L+ M + G Y+ ++KGYC+EG
Sbjct: 462 LTSKG-LPDLVTFHILMEGYC-RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Query: 452 NVENVMQIAHEMVTKKGRLLKL 473
N++ + +M +K R L++
Sbjct: 520 NLKAATNMRTQM--EKERRLRM 539
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 167/314 (53%), Gaps = 10/314 (3%)
Query: 160 SYNSLLGVLVRVNS---IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
SYN+L+ ++ + A+ ++V EN V P+++T+ +I G+ K + + KV
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMV-ENDVSPNLTTFNILIDGFWKDDNLPGSMKV 318
Query: 217 FDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
F M VKPN+++YN++ING C G++ EA ++M++ G +PN +TYNA+I G C
Sbjct: 319 FKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK 378
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
N + EA + ++ G + ++ C +GK D + + PDV +
Sbjct: 379 NDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGT 438
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I G C+ G + A L ++ ++GL P + +F+ + GE +A +LLK+M
Sbjct: 439 YNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMS 497
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH-NLDFTMYSCLLKGYCEEGN 452
+M P ++YN ++ G C +G ++ ++ +M + ++ Y+ LL+GY ++G
Sbjct: 498 KMGLKPRHLTYNIVMKGYC-KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Query: 453 VENVMQIAHEMVTK 466
+E+ + +EM+ K
Sbjct: 557 LEDANMLLNEMLEK 570
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 145/288 (50%), Gaps = 11/288 (3%)
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAY 229
S+K+ +E Q VK NV+ +Y ++I G C G I A + D M V+PNL+ Y
Sbjct: 315 SMKVFKEMLDQDVKPNVI-----SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITY 369
Query: 230 NTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 289
N +INGFCK L+EA + +G P YN +I C G++D+ L +M
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
G +V T+ ++ GLC G + A + + PD+ ++ +++ G+C+ G+S +
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRK 488
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP-NFVSYNTII 408
A LLKEM GLKP ++N V + + G L A + QM + L N SYN ++
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 409 CGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
G KG+++D L++ M+ G + Y + + ++G V ++
Sbjct: 549 QGYSQ-KGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDI 595
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 130/248 (52%), Gaps = 4/248 (1%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI---NGRVD 278
++PN+ +N +IN CK G++ +A+ M +M GC PN ++YN +I G C NG++
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 279 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVI 338
+A ++ +M N N++T ++ G ++ + +++ ++ P+V SY +I
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 339 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 398
NG C GK EAIS+ +M + G++P + ++NA+ +N L A+ + + +
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 399 PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQ 458
P YN +I C G++ D L + M R G D Y+CL+ G C GN+E +
Sbjct: 399 PTTRMYNMLIDAYCKL-GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 459 IAHEMVTK 466
+ ++ +K
Sbjct: 458 LFDQLTSK 465
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 39/232 (16%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI + +K A+ F K YN L+ ++ I ++ +E
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFCKKGELEEAK 246
+VP DV TY +I G C+ G IE AKK+FD +T K P+L+ ++ ++ G+C+KGE +A
Sbjct: 432 IVP-DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAA 490
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCING------------------------------- 275
+ EM G +P LTYN ++ G C G
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 276 -----RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 322
++++A ML+ +M G N T++ + + + G G+L NV
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNV 602
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
K +S + + KEM R ++P VF+FN V L + G++++A +++ M C PN V
Sbjct: 200 KENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVV 259
Query: 403 SYNTIICGLCM--AKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
SYNT+I G C G+M + ++ M+ + + + T ++ L+ G+ ++ N+ M++
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVF 319
Query: 461 HEMVTK 466
EM+ +
Sbjct: 320 KEMLDQ 325
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV---FRIL 376
+ ++ + P+V ++ VVIN CK GK ++A ++++M+ G P V S+N + + L
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK---GRMQDVEDLVDRMIRSGH 433
NG++ +A +LK+M + D PN ++N +I G G M+ ++++D+ ++
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP-- 329
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ Y+ L+ G C G + + + +MV+
Sbjct: 330 --NVISYNSLINGLCNGGKISEAISMRDKMVS 359
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 166/333 (49%), Gaps = 5/333 (1%)
Query: 136 RGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVS 195
R + A+ + ++ G + + NSLL N I A Q+V E PD
Sbjct: 113 RSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV-EMGYQPDTV 171
Query: 196 TYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEM 252
T+TT++ G + A + + M VK P+L+ Y +ING CK+GE + A +N+M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
+ + Y+ +I LC VD+A L +M G + +V T+ S++ LC G++
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
A L +++E +NP+V ++ +I+ F K GK EA L EM R + P + ++N++
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
+ LD A + M DCLP+ V+YNT+I G C AK ++ D +L M R G
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK-KVVDGMELFRDMSRRG 410
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ Y+ L+ G+ + + +N + +MV+
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 189/371 (50%), Gaps = 9/371 (2%)
Query: 88 YHHTTPCYTAITDVLLSHSLISIAASLLKN---SNKLSDFFI-SKLIKAYGDRGNVKAAI 143
Y T +T + L H+ S A +L++ D +I RG A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 144 FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
++ ++ + A + Y++++ L + + A F ++ + + PDV TY+++I
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI-RPDVFTYSSLISC 284
Query: 204 YCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
C G +A ++ M + PN++ +N++I+ F K+G+L EA+K +EM+ R PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
+TYN++I G C++ R+DEA+ + M +V T+ +++ G C K + R
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
++ + + +Y +I+GF + D A + K+M + G+ P + ++N + L +NG
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
+L++A+++ + + + P+ +YN + G+C A G+++D DL + G D Y
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA-GKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 441 SCLLKGYCEEG 451
+ ++ G+C++G
Sbjct: 524 NTMISGFCKKG 534
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 141/252 (55%), Gaps = 4/252 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++NSL+ + + AE+ F ++++ ++ P++ TY ++I G+C ++ A+++F +
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSI-DPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K P+++ YNT+INGFCK ++ + + +M RG N +TY +I+G
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+M+ +M +G N+ T+ ++L GLC GK ++A+ + ++ M PD+ +Y +
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+ G CK GK ++ L + +G+KP V ++N + + G + A L +M +
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 397 CLPNFVSYNTII 408
LP+ +YNT+I
Sbjct: 551 PLPDSGTYNTLI 562
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 147/280 (52%), Gaps = 4/280 (1%)
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
V ++ TY MI C+ + A + M P+++ N+++NGFC + EA
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 247 KCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGL 306
+++M+ G +P+ +T+ +++GL + + EA L+ +M + G + ++ T+ +++ GL
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 307 CVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
C G+ D A+ L + + + DV Y VI+ CK D+A++L EM +G++P V
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 367 FSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 426
F+++++ L G A LL M + PN V++N++I +G++ + E L D
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA-KEGKLIEAEKLFD 334
Query: 427 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
MI+ + + Y+ L+ G+C ++ QI MV+K
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 169/329 (51%), Gaps = 13/329 (3%)
Query: 71 ALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN--SNKLSDFFIS- 127
AL F N P+ + Y+++ L ++ S A+ LL + K++ ++
Sbjct: 259 ALNLFTEMDNKGIRPDVF-----TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 128 -KLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
LI A+ G + A F + Q + +YNSL+ + + A++ F +V
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGELE 243
++ +P DV TY T+I G+CK + + ++F M+ + N + Y T+I+GF + + +
Sbjct: 374 KDCLP-DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A+ +M++ G PN +TYN ++ GLC NG++++A ++ ++ + + ++ T+ M
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+G+C GK + ++ + PDV +Y +I+GFCK G +EA +L +M+ G
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQM 392
P ++N + R + +G+ + L+K+M
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 110/229 (48%), Gaps = 1/229 (0%)
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L+EA EM+ P+ + ++ ++ + + D KM + G N+ T+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
M+ LC + A+ L +M+ P + + ++NGFC + EA++L+ +M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G +P +F + L ++ + A+ L+++M C P+ V+Y +I GLC +G
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC-KRGEPDL 223
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGR 469
+L+++M + D +YS ++ C+ +V++ + + EM K R
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 196/429 (45%), Gaps = 14/429 (3%)
Query: 45 PLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLS 104
P+ + L + +I +Q N AL F +A +P + H Y +I L
Sbjct: 39 PIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPG---FTHNYDTYHSILFKLSR 95
Query: 105 HSLISIAASL---LKNSN---KLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACL 158
SL L+NS K + L++ YG G ++++ F + +
Sbjct: 96 ARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSV 155
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
S N+LL VL++ L F + + P++ T +++ CK IE+A KV D
Sbjct: 156 RSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLD 215
Query: 219 ---VMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M + PNL+ Y T++ G+ +G++E AK+ + EM++RG P+ TY ++ G C G
Sbjct: 216 EIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLG 275
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
R EA +M M N + N T+ M++ LC K +A ++E + PD
Sbjct: 276 RFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCC 335
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
VI+ C+ K DEA L ++M P + + L + G + A L + +
Sbjct: 336 KVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EK 394
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
+P+ ++YNT+I G+C KG + + L D M + Y+ L++G + GNV+
Sbjct: 395 GSIPSLLTYNTLIAGMC-EKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKE 453
Query: 456 VMQIAHEMV 464
+++ EM+
Sbjct: 454 GVRVLEEML 462
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 10/182 (5%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK--PNLLAYNTMINGFC 237
+ +++K N +P D + +T+I CK G + A+K+FD P+LL YNT+I G C
Sbjct: 353 LWRKMLKNNCMP-DNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMC 411
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
+KGEL EA + ++M R C+PN TYN +I GL NG V E ++ +M G N +
Sbjct: 412 EKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKT 471
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNP--DVKSYEVVINGFCKIGKSDEAISLLK 355
T + +GL +GK + A ++ V A MN D +S+E+ + F G+ D+ + LK
Sbjct: 472 TFLILFEGLQKLGKEEDA---MKIVSMAVMNGKVDKESWELFLKKFA--GELDKGVLPLK 526
Query: 356 EM 357
E+
Sbjct: 527 EL 528
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 178/333 (53%), Gaps = 9/333 (2%)
Query: 136 RGNVKAAIFWFHQAKQ--IENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
RG++ A+ + +Q IE G +Y N+++ L ++ A F ++ + + P+
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIY--NTIIDALCNYKNVNDALNLFTEMDNKGI-RPN 290
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
V TY ++IR C G +A ++ M + PN++ ++ +I+ F K+G+L EA+K +
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
EM+ R P+ TY+++I G C++ R+DEAK + M NV T+ +++KG C
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ D+ + R + + + + +Y +I+GF + + D A + K+M + G+ P + +++
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ L NG+++ A+++ + + + P+ +YN +I G+C A G+++D DL +
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA-GKVEDGWDLFCSLSL 529
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G + Y+ ++ G+C +G E + EM
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 169/342 (49%), Gaps = 5/342 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S LI + R + A+ + ++ + + NSLL N I A Q+V
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV- 178
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E PD T+ T+I G + A + D M VK P+L+ Y ++NG CK+G+++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A + +M P + YN +I LC V++A L +M G + NV T+ S++
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+ LC G++ A L +++E +NP+V ++ +I+ F K GK EA L EM R +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +F+++++ + LD A + + M DC PN V+YNT+I G C AK R+ + +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK-RVDEGME 417
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
L M + G + Y+ L+ G+ + +N + +MV+
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 139/252 (55%), Gaps = 4/252 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++++L+ V+ + AE+ + +++K ++ PD+ TY+++I G+C ++ AK +F++
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ YNT+I GFCK ++E + EM RG N +TY +I+G
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+++ +M +G ++ T+ +L GLC GK + A+ + + M PD+ +Y +
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK GK ++ L + +G+KP V ++ + G + A L ++M +
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 397 CLPNFVSYNTII 408
LP+ +YNT+I
Sbjct: 567 PLPDSGTYNTLI 578
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 185/386 (47%), Gaps = 28/386 (7%)
Query: 85 PNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIF 144
P + H + + V + ISI N+L+D + + +GD VK+ F
Sbjct: 29 PPSFSHCSFWVRDFSGVRYDYRKISI--------NRLNDLKLDDAVNLFGDM--VKSRPF 78
Query: 145 WFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRG 203
+ ++ LL + ++N L Q+ +N+ + ++ TY+ +I
Sbjct: 79 -----------PSIVEFSKLLSAIAKMNKFDLVISLGEQM--QNLGISHNLYTYSILINC 125
Query: 204 YCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPN 260
+C+ + A V M +P+++ N+++NGFC + +A + +M+ G +P+
Sbjct: 126 FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD 185
Query: 261 ELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLR 320
T+N +I+GL + R EA L+ +M + G + ++ T+ ++ GLC G D A+ L+
Sbjct: 186 SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLK 245
Query: 321 NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENG 380
+ + + P V Y +I+ C ++A++L EM +G++P V ++N++ R L G
Sbjct: 246 KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305
Query: 381 ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMY 440
A LL M + PN V+++ +I + +G++ + E L D MI+ + D Y
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAF-VKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 441 SCLLKGYCEEGNVENVMQIAHEMVTK 466
S L+ G+C ++ + M++K
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISK 390
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 5/231 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+YN+L+ + + E F ++ + +V V TYTT+I G+ + +NA+ VF
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV-TYTTLIHGFFQARECDNAQIVFKQ 456
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M V P+++ Y+ +++G C G++E A + P+ TYN MI G+C G+
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
V++ L + L G K NV T+ +M+ G C G ++A R + E PD +Y
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAIL 387
+I + G + L++EMR+ + V +L +G LD++ L
Sbjct: 577 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML-HDGRLDKSFL 626
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 164/334 (49%), Gaps = 5/334 (1%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G V+ A + + + G +Y+ N ++ L + ++ F Q V+E V PD+ T
Sbjct: 214 GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQ-VQEKGVYPDIVT 272
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y T+I Y G++E A ++ + M K P + YNT+ING CK G+ E AK+ EM+
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 254 NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFD 313
G P+ TY +++ C G V E + + + MR ++ SM+ G D
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 314 QAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVF 373
+A+ Y +V EA + PD Y ++I G+C+ G A++L EM +G V ++N +
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 374 RILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGH 433
L + L A L +M + P+ + +I G C G +Q+ +L +M
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL-GNLQNAMELFQKMKEKRI 511
Query: 434 NLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
LD Y+ LL G+ + G+++ +I +MV+K+
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 176/355 (49%), Gaps = 17/355 (4%)
Query: 123 DFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFH 182
D I ++A R +A + + AC N+L+G LVR+ ++LA +
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC----NALIGSLVRIGWVELAWGVYQ 224
Query: 183 QIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKK 239
+I + V +V T M+ CK G +E + K P+++ YNT+I+ + K
Sbjct: 225 EISRSGV-GINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G +EEA + MN M +G P TYN +I GLC +G+ + AK + A+M +G + +T+
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+S+L C G + ++ ++ PD+ + +++ F + G D+A+ ++
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 360 RGLKPTVFSFNAVFRILVEN----GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 415
GL P N ++ IL++ G + A+ L +M Q C + V+YNTI+ GLC K
Sbjct: 404 AGLIPD----NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRL 470
+ + + L + M D + L+ G+C+ GN++N M++ +M K+ RL
Sbjct: 460 -MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 166/349 (47%), Gaps = 42/349 (12%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L ++S++ + R ++ A +F+ VKE + PD YT +I+GYC+ GMI A +
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNS-VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M + +++ YNT+++G CK+ L EA K NEM R P+ T +I G C
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G + A L KM+ + +V T+ ++L G VG D A +++ + P SY
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTV---------------------------- 366
+++N C G EA + EM ++ +KPTV
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 367 -------FSFNAVFRILVENGELDRAILLLKQMP--QMDCLPNFVSYNTIICGLCMAKGR 417
S+N + V + +A L+K+M Q +P+ +YN+I+ G C + +
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFC-RQNQ 672
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
M++ E ++ +MI G N D + Y+C++ G+ + N+ +I EM+ +
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 172/343 (50%), Gaps = 9/343 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI AY +G ++ A + +Y+YN+++ L + + A+E F ++++
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
+ PD +TY +++ CK G + +KVF M V P+L+ +++M++ F + G L++A
Sbjct: 336 L-SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
N + G P+ + Y +I G C G + A L +M G +V T+ ++L G
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +A + E + PD + ++I+G CK+G A+ L ++M+ + ++
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
V ++N + + G++D A + M + LP +SY+ ++ LC +KG + + +
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC-SKGHLAEAFRVW 573
Query: 426 DRMIRSGHNLDFTMYSC--LLKGYCEEGNVENVMQIAHEMVTK 466
D MI N+ T+ C ++KGYC GN + +M+++
Sbjct: 574 DEMI--SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 154/309 (49%), Gaps = 5/309 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
++ L+ V+ ++ A E F +++ + +I ++G +E A V+ +
Sbjct: 168 FDLLIRTYVQARKLREAHEAF-TLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ V N+ N M+N CK G++E+ ++++ +G P+ +TYN +I G +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+EA LM M GF V T+ +++ GLC GK+++A ++ + ++PD +Y +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
+ CK G E + +MR+R + P + F+++ + +G LD+A++ + +
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
+P+ V Y +I G C KG + +L + M++ G +D Y+ +L G C+ +
Sbjct: 407 IPDNVIYTILIQGYC-RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 458 QIAHEMVTK 466
++ +EM +
Sbjct: 466 KLFNEMTER 474
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 127/246 (51%), Gaps = 6/246 (2%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
+ ++ LI + GN++ A+ F + K+ + +YN+LL +V I A+E +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKG 240
+V + ++P +S Y+ ++ C G + A +V+D M +KP ++ N+MI G+C+ G
Sbjct: 541 MVSKEILPTPIS-YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR--LNGFKDNVST 298
+ + + +M++ G P+ ++YN +IYG + +A L+ KM G +V T
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 299 HKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMR 358
+ S+L G C + +A LR ++E +NPD +Y +INGF EA + EM
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 359 ARGLKP 364
RG P
Sbjct: 720 QRGFSP 725
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 128/247 (51%), Gaps = 6/247 (2%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
Y+ L+ ++ +++ A E F Q +KE + DV TY T++ G+ K+G I+ AK+++
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELF-QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 219 VMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
M K P ++Y+ ++N C KG L EA + +EM+++ +P + N+MI G C +G
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME--ANMNPDVKS 333
+ + + KM GF + ++ +++ G +A G ++ + E + PDV +
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +++GFC+ + EA +L++M RG+ P ++ + V L A + +M
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 394 QMDCLPN 400
Q P+
Sbjct: 720 QRGFSPD 726
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 123/267 (46%), Gaps = 18/267 (6%)
Query: 217 FDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG-----------------CRP 259
F K L+ + MI+ + G L +A+ C+ M+ R C
Sbjct: 104 FHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGS 163
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
N+ ++ +I ++ EA +R GF ++ +++ L +G + A G
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ + + + +V + +++N CK GK ++ + L +++ +G+ P + ++N +
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
G ++ A L+ MP P +YNT+I GLC G+ + +++ M+RSG + D T
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC-KHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 440 YSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y LL C++G+V ++ +M ++
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSR 369
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 174/326 (53%), Gaps = 15/326 (4%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y++ + + ++LA + FH + K + + P+V T+T +I GYCK G +E A ++
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSM-KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M + N++ Y +I+GFCKKGE++ A++ + M+ PN L Y +I G G
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A +AKM G + +++ + ++ GLC GK +A + ++ ++++ PD+ +
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
++N + K G+ A+++ ++ RG +P V + + + + +NG+L AI+
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF------- 396
Query: 397 CL--PNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
C+ N V Y +I LC +G +VE L ++ +G D MY+ + G C++GN+
Sbjct: 397 CIEKANDVMYTVLIDALC-KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRV 480
+ ++ MV ++G LL L + T +
Sbjct: 456 DAFKLKTRMV-QEGLLLDLLAYTTLI 480
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 156/313 (49%), Gaps = 9/313 (2%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
S+NS++ + ++ +K AE+ H + + PDV +Y ++I G+C+ G I +A V +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFG-CEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 220 MTV------KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
+ KP+++++N++ NGF K L+E M M+ + C PN +TY+ I C
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCK 175
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+G + A M+ + NV T ++ G C G + AV + + M+ +V +
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I+GFCK G+ A + M ++P + + + G+ D A+ L +M
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
+ +Y II GLC G++++ ++V+ M +S D +++ ++ Y + G +
Sbjct: 296 NQGMRLDITAYGVIISGLC-GNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 454 ENVMQIAHEMVTK 466
+ + + H+++ +
Sbjct: 355 KAAVNMYHKLIER 367
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 175/378 (46%), Gaps = 18/378 (4%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN--VVPPDV 194
G VK A H + + SYNSL+ R I+ A + + + PD+
Sbjct: 70 GQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDI 129
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVM--TVKPNLLAYNTMINGFCKKGELEEAKKCMNEM 252
++ ++ G+ KM M++ VM PN++ Y+T I+ FCK GEL+ A K + M
Sbjct: 130 VSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSM 189
Query: 253 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 312
PN +T+ +I G C G ++ A L +MR NV T+ +++ G C G+
Sbjct: 190 KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEM 249
Query: 313 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 372
+A ++E + P+ Y +I+GF + G SD A+ L +M +G++ + ++ +
Sbjct: 250 QRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVI 309
Query: 373 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 432
L NG+L A +++ M + D +P+ V + T++ GRM+ ++ ++I G
Sbjct: 310 ISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY-FKSGRMKAAVNMYHKLIERG 368
Query: 433 HNLDFTMYSCLLKGYCEEGNVENVM-------------QIAHEMVTKKGRLLKLKNFLTR 479
D S ++ G + G + + + + + K+G ++++ ++
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSK 428
Query: 480 VVDALLLMWIVTGGSWIS 497
+ +A L+ SWI+
Sbjct: 429 ISEAGLVPDKFMYTSWIA 446
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 179/390 (45%), Gaps = 43/390 (11%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S I + G ++ A+ FH K+ + ++ L+ + +++A + ++ +
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELE 243
+ +V TYT +I G+CK G ++ A++++ M V+PN L Y T+I+GF ++G+ +
Sbjct: 227 VRM-SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A K + +M+N+G R + Y +I GLC NG++ EA ++ M + ++ +M+
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKS------------------------------ 333
G+ AV ++E PDV +
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM 405
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y V+I+ CK G E L ++ GL P F + + L + G L A L +M
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNV 453
Q L + ++Y T+I GL +KG M + + D M+ SG + D ++ L++ Y +EGN
Sbjct: 466 QEGLLLDLLAYTTLIYGLA-SKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGN- 523
Query: 454 ENVMQIAHEMVTKKGRLLKLKNFLTRVVDA 483
M A +++ R + +T V DA
Sbjct: 524 ---MAAASDLLLDMQR----RGLVTAVSDA 546
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 134/250 (53%), Gaps = 5/250 (2%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+ ++N++++ CK G+++ A+ ++ M GC P+ ++YN++I G C NG + A ++
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 284 MAKMRL-NGF--KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+ +R +GF K ++ + S+ G + D+ Y+ VM +P+V +Y I+
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYM-GVMLKCCSPNVVTYSTWIDT 172
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
FCK G+ A+ M+ L P V +F + + G+L+ A+ L K+M ++ N
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V+Y +I G C KG MQ E++ RM+ + +Y+ ++ G+ + G+ +N M+
Sbjct: 233 VVTYTALIDGFC-KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 461 HEMVTKKGRL 470
+M+ + RL
Sbjct: 292 AKMLNQGMRL 301
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 7/276 (2%)
Query: 95 YTAITDVLL----SHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
YT I D S + + A +L +L +I G +K A +
Sbjct: 271 YTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDME 330
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + + + +++ + +K A +H+++ E PDV +TMI G K G +
Sbjct: 331 KSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLI-ERGFEPDVVALSTMIDGIAKNGQL 389
Query: 211 ENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
A F + K N + Y +I+ CK+G+ E ++ +++ G P++ Y + I G
Sbjct: 390 HEAIVYFCIE--KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAG 447
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
LC G + +A L +M G ++ + +++ GL G +A ++ + ++PD
Sbjct: 448 LCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTV 366
++++I + K G A LL +M+ RGL V
Sbjct: 508 SAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM-LMAKMRLNGFKDNVSTHK 300
+ EA + ++ + P+ T N I+ L IN + +A + G+ + S+
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQL-INSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA- 359
S++ +C +G+ A + ++ PDV SY +I+G C+ G A +L+ +RA
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 360 RGL--KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
G KP + SFN++F + LD + + M + C PN V+Y+T I C + G
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKS-GE 178
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+Q M R + + ++CL+ GYC+ G++E + + EM
Sbjct: 179 LQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
+S +I G + AI +F K + Y L+ L + E F +I
Sbjct: 376 LSTMIDGIAKNGQLHEAIVYFCIEKAND-----VMYTVLIDALCKEGDFIEVERLFSKIS 430
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTMINGFCKKGEL 242
+ +VP D YT+ I G CK G + +A K+ M + +LLAY T+I G KG +
Sbjct: 431 EAGLVP-DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLM 489
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
EA++ +EM+N G P+ ++ +I G + A L+ M+ G VS
Sbjct: 490 VEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 25/169 (14%)
Query: 314 QAVGYLRNVMEANMNPDV----KSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
+A+ +L + +++ PD K +IN C I ++ L + +RG P SF
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGI----LSLKFLAYLVSRGYTPHRSSF 59
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE--DLVDR 427
N+V + + G++ A ++ MP+ C P+ +SYN++I G C R D+ LV
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHC----RNGDIRSASLVLE 115
Query: 428 MIRSGHNL----DFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLK 472
+R+ H D ++ L G+ + M++ E+ G +LK
Sbjct: 116 SLRASHGFICKPDIVSFNSLFNGFSK-------MKMLDEVFVYMGVMLK 157
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 178/346 (51%), Gaps = 7/346 (2%)
Query: 121 LSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
++DF S+L+ A I+ + Q + + L + N LL R + + LA F
Sbjct: 81 IADF--SRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237
+++K P + T+ +++ G+C+ + +A +FD M KPN++ YNT+I+G C
Sbjct: 139 LGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 238 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 297
K +++ A +N M G P+ +TYN++I GLC +GR +A +++ M +V
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 298 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 357
T +++ G+ +A + ++ +++PD+ +Y ++I G C + DEA + M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 358 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 417
++G P V +++ + ++ +++ + L +M Q + N V+Y +I G C A G+
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA-GK 376
Query: 418 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+ E++ RM+ G + + Y+ LL G C+ G +E + I +M
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 179/349 (51%), Gaps = 9/349 (2%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAY--GDRGNVKAAIFWFHQAKQIENGACLYSYNSLL 165
+S ++K ++ S L+ + GDR V A++ F Q + + YN+++
Sbjct: 136 LSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR--VYDALYMFDQMVGMGYKPNVVIYNTII 193
Query: 166 GVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---V 222
L + + A + +++ K+ + PDV TY ++I G C G +A ++ MT +
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGI-GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 223 KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKM 282
P++ +N +I+ K+G + EA++ EM+ R P+ +TY+ +IYGLC+ R+DEA+
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 283 LMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFC 342
+ M G +V T+ ++ G C K + + + + + + +Y ++I G+C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 343 KIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFV 402
+ GK + A + + M G+ P + ++N + L +NG++++A+++L M + + V
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 403 SYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+YN II G+C A G + D D+ + G D Y+ ++ G ++G
Sbjct: 433 TYNIIIRGMCKA-GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 138/246 (56%), Gaps = 4/246 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++++N+L+ V+ + AEEF+ ++++ ++ PD+ TY+ +I G C ++ A+++F
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSL-DPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M K P+++ Y+ +ING+CK ++E K EM RG N +TY +I G C
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G+++ A+ + +M G N+ T+ +L GLC GK ++A+ L ++ + M+ D+ +Y
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++I G CK G+ +A + + +GL P ++++ + L + G A L ++M +
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Query: 395 MDCLPN 400
LPN
Sbjct: 495 DGILPN 500
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 149/290 (51%), Gaps = 6/290 (2%)
Query: 180 FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGF 236
FFH + + P ++ ++ ++ KM + +++ M + NL N ++N F
Sbjct: 69 FFHMVQCRPL--PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 237 CKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
C+ +L A + +M+ G P+ +T+ +++ G C RV +A + +M G+K NV
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
+ +++ GLC + D A+ L + + + PDV +Y +I+G C G+ +A ++
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKG 416
M R + P VF+FNA+ V+ G + A ++M + P+ V+Y+ +I GLCM
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS- 305
Query: 417 RMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R+ + E++ M+ G D YS L+ GYC+ VE+ M++ EM +
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
+++ +L + + K+D + + + ++ + +++N FC+ + A+S L
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
+M G +P++ +F ++ + A+ + QM M PN V YNTII GLC +
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
K ++ + DL++RM + G D Y+ L+ G C G + ++ M ++
Sbjct: 200 K-QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 82/169 (48%), Gaps = 1/169 (0%)
Query: 295 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 354
N S ++ ML+ K D ++ ++++ P + + +++ K+ K D I L
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 355 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 414
++M+ G+ + + N + +L A+ L +M ++ P+ V++ +++ G C
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 415 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
R+ D + D+M+ G+ + +Y+ ++ G C+ V+N + + + M
Sbjct: 165 D-RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 4/136 (2%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI+ Y G + A F + + +YN LL L I+ A + K N
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK-N 425
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ D+ TY +IRG CK G + +A ++ + + P++ Y TM+ G KKG EA
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485
Query: 246 KKCMNEMMNRGCRPNE 261
+M G PNE
Sbjct: 486 DALFRKMKEDGILPNE 501
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 198/429 (46%), Gaps = 18/429 (4%)
Query: 82 NPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKA 141
+PN Y+ ++ VL++ L++ S + N ++ + LI + GN K
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT---FNALIDGHISEGNFKE 351
Query: 142 AI--FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTT 199
A+ F+ +AK + SY LL L + LA F+ ++ K N V TYT
Sbjct: 352 ALKMFYMMEAKGLTPSEV--SYGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGRITYTG 408
Query: 200 MIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRG 256
MI G CK G ++ A + + M+ + P+++ Y+ +INGFCK G + AK+ + + G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 257 CRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAV 316
PN + Y+ +IY C G + EA + M L G + T ++ LC GK +A
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 317 GYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 376
++R + + P+ S++ +ING+ G+ +A S+ EM G PT F++ ++ + L
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 377 VENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLD 436
+ G L A LK + + + V YNT++ +C + G + L M++ D
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS-GNLAKAVSLFGEMVQRSILPD 647
Query: 437 FTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLMWIVTGGSWI 496
Y+ L+ G C +G + A E +G +L K T VD + G W
Sbjct: 648 SYTYTSLISGLCRKGKTVIAILFAKE-AEARGNVLPNKVMYTCFVDGMF-----KAGQWK 701
Query: 497 SRFVFVHQV 505
+ F Q+
Sbjct: 702 AGIYFREQM 710
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 158/340 (46%), Gaps = 5/340 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI G+ + + + + ++ + +YN++L + K A E + K
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM-KSK 257
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEA 245
V DV TY +I C+ I + M + PN + YNT+INGF +G++ A
Sbjct: 258 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 317
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ +NEM++ G PN +T+NA+I G G EA + M G + ++ +L G
Sbjct: 318 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 377
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC +FD A G+ + + +Y +I+G CK G DEA+ LL EM G+ P
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ +++A+ + G A ++ ++ ++ PN + Y+T+I C G +++ +
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM-GCLKEAIRIY 496
Query: 426 DRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ MI GH D ++ L+ C+ G V + M +
Sbjct: 497 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 164/342 (47%), Gaps = 9/342 (2%)
Query: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
F+ + KA G KA I++ Q + + + + N+++ R+ I+ + ++
Sbjct: 690 FVDGMFKA----GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Query: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGE 241
+N P+++TY ++ GY K + + ++ + + P+ L ++++ G C+
Sbjct: 746 GNQNG-GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 804
Query: 242 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
LE K + + RG + T+N +I C NG ++ A L+ M G + T +
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
M+ L +F ++ L + + ++P+ + Y +ING C++G A + +EM A
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
+ P + +A+ R L + G+ D A LLL+ M +M +P S+ T++ LC G + +
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM-HLCCKNGNVIEA 983
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+L M G LD Y+ L+ G C +G++ ++ EM
Sbjct: 984 LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 133/307 (43%), Gaps = 39/307 (12%)
Query: 195 STYTTMIRGYCKMGMIENAKKVFDVM---------------------------------- 220
S Y +IR Y + GMI+++ ++F +M
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183
Query: 221 ----TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
+ P++ +N +IN C +G E++ M +M G P +TYN +++ C GR
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
A L+ M+ G +V T+ ++ LC + + LR++ + ++P+ +Y
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+INGF GK A LL EM + GL P +FNA+ + G A+ + M
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
P+ VSY ++ GLC RM R+G + Y+ ++ G C+ G ++
Sbjct: 364 LTPSEVSYGVLLDGLC-KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422
Query: 457 MQIAHEM 463
+ + +EM
Sbjct: 423 VVLLNEM 429
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 5/321 (1%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I Y G ++ + G L +YN LL + + + + I+ N
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL-N 783
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGELEEA 245
+ PD T +++ G C+ M+E K+ F V+ + +N +I+ C GE+ A
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 305
+ M + G ++ T +AM+ L N R E++M++ +M G + ++ G
Sbjct: 844 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 903
Query: 306 LCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPT 365
LC VG A ++ + P + ++ K GK+DEA LL+ M L PT
Sbjct: 904 LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 963
Query: 366 VFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLV 425
+ SF + + +NG + A+ L M + VSYN +I GLC AKG M +L
Sbjct: 964 IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC-AKGDMALAFELY 1022
Query: 426 DRMIRSGHNLDFTMYSCLLKG 446
+ M G + T Y L++G
Sbjct: 1023 EEMKGDGFLANATTYKALIRG 1043
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 12/315 (3%)
Query: 159 YSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFD 218
+++N L+ L + + AEEF + + ++P VS + +I GY G A VFD
Sbjct: 509 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS-FDCLINGYGNSGEGLKAFSVFD 567
Query: 219 VMTV---KPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCING 275
MT P Y +++ G CK G L EA+K + + + + YN ++ +C +G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV-MEANMNPDVKSY 334
+ +A L +M + T+ S++ GLC GK A+ + + N+ P+ Y
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++G K G+ I ++M G P + + NA+ G++++ LL +M
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVED---LVDRMIRSGHNLDFTMYSCLLKGYCEEG 451
+ PN +YN ++ G + +DV L +I +G D L+ G CE
Sbjct: 748 QNGGPNLTTYNILLHGY----SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 803
Query: 452 NVENVMQIAHEMVTK 466
+E ++I + +
Sbjct: 804 MLEIGLKILKAFICR 818
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 156/352 (44%), Gaps = 14/352 (3%)
Query: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F L+K G+++ A + + YN+LL + + ++ A F +
Sbjct: 579 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 638
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMG----MIENAKKVFDVMTVKPNLLAYNTMINGFCKK 239
+V+ +++P D TYT++I G C+ G I AK+ V PN + Y ++G K
Sbjct: 639 MVQRSILP-DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 697
Query: 240 GELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTH 299
G+ + +M N G P+ +T NAMI G G++++ L+ +M N++T+
Sbjct: 698 GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTY 757
Query: 300 KSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRA 359
+L G + R+++ + PD + ++ G C+ + + +LK
Sbjct: 758 NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 817
Query: 360 RGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA----K 415
RG++ ++FN + NGE++ A L+K M + +S + C ++
Sbjct: 818 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG-----ISLDKDTCDAMVSVLNRN 872
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
R Q+ ++ M + G + + Y L+ G C G+++ + EM+ K
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 9/215 (4%)
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
R C N Y+ +I G + ++ + M L GF +V T ++L + G+
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176
Query: 315 AVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR 374
+L+ +++ + PDV ++ ++IN C G +++ L+++M G PT+ ++N V
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 375 ILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC----MAKGRMQDVEDLVDRMIR 430
+ G AI LL M + +YN +I LC +AKG + + D+ RMI
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL-LRDMRKRMIH 295
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
Y+ L+ G+ EG V Q+ +EM++
Sbjct: 296 PNE----VTYNTLINGFSNEGKVLIASQLLNEMLS 326
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Query: 222 VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK 281
+ P Y +ING C+ G+++ A EM+ P + +AM+ L G+ DEA
Sbjct: 890 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949
Query: 282 MLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVME-ANMNPDVKSYEVVING 340
+L+ M +++ +++ C G +A+ LR VM + D+ SY V+I G
Sbjct: 950 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL-ELRVVMSNCGLKLDLVSYNVLITG 1008
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFR-ILVENGELDRAILLLKQM 392
C G A L +EM+ G ++ A+ R +L A ++LK +
Sbjct: 1009 LCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDL 1061
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 199/440 (45%), Gaps = 26/440 (5%)
Query: 6 RSLTNISQIPDQSILVTSITSVIQRLNPQNPSPKNISSQPLDQFSLCLGSNIVTKVIYEQ 65
R + + P LV I+ V+ + +PK+ L +S + SN+V +V+
Sbjct: 23 RIFSTLLHDPPSPDLVNEISRVLS----DHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRC 78
Query: 66 TN---PYHALFFFNWASN-PNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKL 121
N P H FF WA P+ + H+ Y + ++L S ++ L + +
Sbjct: 79 KNLGFPAHR--FFLWARRIPD-----FAHSLESYHILVEILGSSKQFALLWDFLIEAREY 131
Query: 122 SDFFISK-----LIKAYGDRGNVKA-AIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIK 175
+ F IS + +AY R N+ + A F++ + C+ + LL L +
Sbjct: 132 NYFEISSKVFWIVFRAYS-RANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVN 190
Query: 176 LAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKP---NLLAYNTM 232
A+EFF + +VP TY+ ++RG+ ++ A+KVFD M + +LLAYN +
Sbjct: 191 HAQEFFGKAKGFGIVP-SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNAL 249
Query: 233 INGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 292
++ CK G+++ K EM N G +P+ ++ I+ C G V A ++ +M+
Sbjct: 250 LDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDL 309
Query: 293 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 352
NV T ++K LC K D A L +++ NPD +Y ++ C + + A
Sbjct: 310 VPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATK 369
Query: 353 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 412
LL M P ++N V ++L+ G DRA + + M + P +Y +I GL
Sbjct: 370 LLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLV 429
Query: 413 MAKGRMQDVEDLVDRMIRSG 432
KG++++ + MI G
Sbjct: 430 RKKGKLEEACRYFEMMIDEG 449
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 1/224 (0%)
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA + N M+ G +P + +++ LC V+ A+ K + G + T+ ++
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+G + A ++E N D+ +Y +++ CK G D + +EM GLK
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
P +SF + G++ A +L +M + D +PN ++N II LC + ++ D
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNE-KVDDAYL 334
Query: 424 LVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
L+D MI+ G N D Y+ ++ +C+ V ++ M K
Sbjct: 335 LLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
I AY D G+V +A + K+ + +Y++N ++ L + + A +++++
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 189 VVP----------------------------------PDVSTYTTMIRGYCKMGMIENAK 214
P PD TY +++ ++G + A
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRAT 403
Query: 215 KVFDVMTVK---PNLLAYNTMINGFC-KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
++++ M+ + P + Y MI+G KKG+LEEA + M++ G P T +
Sbjct: 404 EIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNR 463
Query: 271 LCINGRVDEAKMLMAKM 287
L G++D +L KM
Sbjct: 464 LVGWGQMDVVDVLAGKM 480
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 198/424 (46%), Gaps = 22/424 (5%)
Query: 58 VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL-- 115
V K++ + + ++ F+ A+ N Y H + + L+S + A L+
Sbjct: 19 VIKLMRAEKDVEKSMAVFDSATAEYAN--GYVHDQSSFGYMVLRLVSANKFKAAEDLIVR 76
Query: 116 ---KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVN 172
+N D +S + + YG ++ FH+ K + +Y ++L +LV N
Sbjct: 77 MKIENCVVSEDILLS-ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEEN 135
Query: 173 SIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKM-GMIENAKKVFDVMTVK---PNLLA 228
+ LA +F+ + +E +PP V++ +I+ C+ G ++ K+F M + P+
Sbjct: 136 QLNLAFKFYKNM-REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYT 194
Query: 229 YNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 288
Y T+I+G C+ G ++EAKK EM+ + C P +TY ++I GLC + VDEA + +M+
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK 254
Query: 289 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 348
G + NV T+ S++ GLC G+ QA+ +M P++ +Y +I G CK K
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314
Query: 349 EAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSY---- 404
EA+ LL M +GLKP + V + A L +M PN +++
Sbjct: 315 EAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHV 374
Query: 405 ---NTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 461
N ++ GLC L M G +++ L+K C++G + +Q+
Sbjct: 375 KTSNEVVRGLC--ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVD 432
Query: 462 EMVT 465
E+VT
Sbjct: 433 EIVT 436
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 186/375 (49%), Gaps = 29/375 (7%)
Query: 49 FSLCLGSNIVTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLI 108
S+C G V + P+ +L F+ + + +P++ Y + +L+ + +
Sbjct: 90 LSICRGYGRVHR-------PFDSLRVFHKMKDFDCDPSQ-----KAYVTVLAILVEENQL 137
Query: 109 SIAASLLKNSNKL----SDFFISKLIKAY-GDRGNVKAAIFWFHQAKQIENGACLYSYNS 163
++A KN ++ + ++ LIKA + G V A + F + + Y+Y +
Sbjct: 138 NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGT 197
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-- 221
L+ L R I A++ F ++V+++ P V TYT++I G C ++ A + + M
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPT-VVTYTSLINGLCGSKNVDEAMRYLEEMKSK 256
Query: 222 -VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
++PN+ Y+++++G CK G +A + MM RGCRPN +TY +I GLC ++ EA
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD-------VKS 333
L+ +M L G K + + ++ G C + KF +A +L ++ + P+ VK+
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKT 376
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
V+ G C S A +L MR+RG+ V + ++ + L + GE +A+ L+ ++
Sbjct: 377 SNEVVRGLCANYPS-RAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIV 435
Query: 394 QMDCLPNFVSYNTII 408
C+P+ ++ +I
Sbjct: 436 TDGCIPSKGTWKLLI 450
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 10/212 (4%)
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV-VGKFDQAVGY 318
++ ++ M+ L + A+ L+ +M++ +N + +L +C G+ +
Sbjct: 50 DQSSFGYMVLRLVSANKFKAAEDLIVRMKI----ENCVVSEDILLSICRGYGRVHRPFDS 105
Query: 319 LR---NVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRI 375
LR + + + +P K+Y V+ + + + A K MR GL PTV S N + +
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 376 LVEN-GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 434
L N G +D + + +MP+ C P+ +Y T+I GLC GR+ + + L M+
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRF-GRIDEAKKLFTEMVEKDCA 224
Query: 435 LDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
Y+ L+ G C NV+ M+ EM +K
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSK 256
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%)
Query: 290 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 349
NG+ + S+ M+ L KF A + + N + G+ ++ + +
Sbjct: 45 NGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFD 104
Query: 350 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 409
++ + +M+ P+ ++ V ILVE +L+ A K M ++ P S N +I
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 410 GLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
LC G + + M + G + D Y L+ G C G ++ ++ EMV K
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 185/396 (46%), Gaps = 40/396 (10%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
I + ++K+ S F +KL+ A I + +++ LY+YN L+
Sbjct: 70 IGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINC 129
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
R + I LA +++K P + T ++++ GYC I +A + D M +P
Sbjct: 130 FCRRSQISLALALLGKMMKLGY-EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA---- 280
+ + + T+I+G + EA ++ M+ RGC+PN +TY ++ GLC G +D A
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 281 -KMLMAKMRLN------------------------------GFKDNVSTHKSMLKGLCVV 309
KM AK+ N G + NV T+ S++ LC
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
++ A L +++E +NP+V ++ +I+ F K GK EA L EM R + P +F++
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+++ + LD A + + M DC PN V+YNT+I G C AK R+ + +L M
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK-RIDEGVELFREMS 427
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
+ G + Y+ L+ G+ + + +N + +MV+
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 135/244 (55%), Gaps = 4/244 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++N+L+ V+ + AE+ + +++K ++ PD+ TY+++I G+C ++ AK +F++
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 220 MTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M K PN++ YNT+INGFCK ++E + EM RG N +TY +I+G
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+M+ +M +G N+ T+ ++L GLC GK ++A+ + + M P + +Y +
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK GK ++ L + +G+KP V +N + G + A L ++M +
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Query: 397 CLPN 400
LP+
Sbjct: 571 PLPD 574
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 175/333 (52%), Gaps = 9/333 (2%)
Query: 136 RGNVKAAIFWFH--QAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
RG++ A + +A +IE +YS +++ L + A F ++ + V P+
Sbjct: 238 RGDIDLAFNLLNKMEAAKIEANVVIYS--TVIDSLCKYRHEDDALNLFTEMENKGV-RPN 294
Query: 194 VSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMN 250
V TY+++I C +A ++ M + PN++ +N +I+ F K+G+L EA+K +
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 251 EMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVG 310
EM+ R P+ TY+++I G C++ R+DEAK + M NV T+ +++ G C
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 311 KFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFN 370
+ D+ V R + + + + +Y +I+GF + D A + K+M + G+ P + ++N
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 371 AVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIR 430
+ L +NG+L++A+++ + + + P +YN +I G+C A G+++D DL +
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA-GKVEDGWDLFCSLSL 533
Query: 431 SGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
G D +Y+ ++ G+C +G E + +M
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 156/312 (50%), Gaps = 5/312 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
++ +N LL + ++ L ++ + + ++ TY +I +C+ I A +
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI-SHNLYTYNILINCFCRRSQISLALALL 143
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M +P+++ ++++NG+C + +A +++M+ G RP+ +T+ +I+GL ++
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
+ EA L+ +M G + N+ T+ ++ GLC G D A L + A + +V Y
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
VI+ CK D+A++L EM +G++P V +++++ L A LL M +
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
PN V++N +I + +G++ + E L D MI+ + D YS L+ G+C ++
Sbjct: 324 RKINPNVVTFNALIDAF-VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 455 NVMQIAHEMVTK 466
+ M++K
Sbjct: 383 EAKHMFELMISK 394
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 95/192 (49%), Gaps = 1/192 (0%)
Query: 276 RVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++D+A L M + ++ +L + + KFD + + ++ ++ +Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
++IN FC+ + A++LL +M G +P++ + +++ + A+ L+ QM +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ +++ T+I GL + + V LVDRM++ G + Y ++ G C+ G+++
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVA-LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 456 VMQIAHEMVTKK 467
+ ++M K
Sbjct: 244 AFNLLNKMEAAK 255
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 17/137 (12%)
Query: 143 IFWFHQAKQIENGACLY-------------SYNSLLGVLVRVNSIKLAEEFFHQIVKENV 189
I F QA+ +N ++ +YN+LL L + ++ A F + ++ +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSK 500
Query: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAK 246
+ P + TY MI G CK G +E+ +F ++ VKP+++ YNTMI+GFC+KG EEA
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 247 KCMNEMMNRGCRPNELT 263
+M G P+ T
Sbjct: 561 ALFRKMREDGPLPDSGT 577
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850, chloroplastic
OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 179/350 (51%), Gaps = 8/350 (2%)
Query: 122 SDFFISKLIKAYGDRGNVKAAIFWFHQ-AKQIENGACLYSYNSLLGVLVRVNSIKLAEEF 180
D + +I+ NV A F + K + L +YN L+G L+ + I++A++
Sbjct: 748 GDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDV 807
Query: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTV---KPNLLAYNTMINGFC 237
F Q VK PDV+TY ++ Y K G I+ +++ M+ + N + +N +I+G
Sbjct: 808 FLQ-VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866
Query: 238 KKGELEEAKKCMNEMM-NRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNV 296
K G +++A ++M +R P TY +I GL +GR+ EAK L M G + N
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNC 926
Query: 297 STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKE 356
+ + ++ G G+ D A + +++ + PD+K+Y V+++ C +G+ DE + KE
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 357 MRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL-PNFVSYNTIICGLCMAK 415
++ GL P V +N + L ++ L+ A++L +M + P+ +YN++I L +A
Sbjct: 987 LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA- 1045
Query: 416 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
G +++ + + + R+G + ++ L++GY G E+ + MVT
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 171/363 (47%), Gaps = 21/363 (5%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L++YN+L+ L+RV+ + A E F + + V P TY I Y K G +A + F
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 218 DVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M K PN++A N + K G EAK+ + + G P+ +TYN M+
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +DEA L+++M NG + +V S++ L + D+A + E + P V +Y
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 576
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 394
++ G K GK EAI L + M +G P +FN +F L +N E+ A+ +L +M
Sbjct: 577 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD 636
Query: 395 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 454
M C+P+ +YNTII GL + G++++ +M + + DF LL G + +E
Sbjct: 637 MGCVPDVFTYNTIIFGL-VKNGQVKEAMCFFHQMKKLVYP-DFVTLCTLLPGVVKASLIE 694
Query: 455 NVMQIAHEMVTKKGRLLKLKNFLTRVVDALL-LMWIVTGGSWISRFVFVHQVVVIMERTV 513
+ +I + NFL D L W GS ++ + V ER V
Sbjct: 695 DAYKI-------------ITNFLYNCADQPANLFWEDLIGSILAE-AGIDNAVSFSERLV 740
Query: 514 EDG 516
+G
Sbjct: 741 ANG 743
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 151/342 (44%), Gaps = 40/342 (11%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
+Y +LL + ++F+ ++ K+ VP DV T+T ++ CK G A DV
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTY------------ 264
M + PNL YNT+I G + L++A + M + G +P TY
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 265 -----------------------NAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 301
NA +Y L GR EAK + ++ G + T+
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 302 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 361
M+K VG+ D+A+ L +ME PDV +IN K + DEA + M+
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 362 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 421
LKPTV ++N + L +NG++ AI L + M Q C PN +++NT+ LC +
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC-KNDEVTLA 627
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
++ +M+ G D Y+ ++ G + G V+ M H+M
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 146/313 (46%), Gaps = 6/313 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+ L+G ++ I A F ++V + S +IR CK + A+ +F+
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKF 775
Query: 221 T----VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
T V+P L YN +I G + +E A+ ++ + GC P+ TYN ++ +G+
Sbjct: 776 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVM-EANMNPDVKSYE 335
+DE L +M + + N TH ++ GL G D A+ ++M + + +P +Y
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895
Query: 336 VVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQM 395
+I+G K G+ EA L + M G +P +N + + GE D A L K+M +
Sbjct: 896 PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 396 DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVEN 455
P+ +Y+ ++ LCM GR+ + + SG N D Y+ ++ G + +E
Sbjct: 956 GVRPDLKTYSVLVDCLCMV-GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 456 VMQIAHEMVTKKG 468
+ + +EM T +G
Sbjct: 1015 ALVLFNEMKTSRG 1027
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 169/374 (45%), Gaps = 40/374 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+ K+ +G +K A + + ++ YSYN L+ +L++ A E + +++ E
Sbjct: 159 IFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG 218
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAK---KVFDVMTVKPNLLAYNTMINGFCKKGELEEA 245
P + TY++++ G K I++ K + + +KPN+ + I + G++ EA
Sbjct: 219 F-RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 246 KKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR--------------LNG 291
+ + M + GC P+ +TY +I LC ++D AK + KM+ L+
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 292 FKDN---------------------VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
F DN V T ++ LC G F +A L + + + P+
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
+ +Y +I G ++ + D+A+ L M + G+KPT +++ ++G+ A+ +
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M PN V+ N + L A GR ++ + + + G D Y+ ++K Y +
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKA-GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516
Query: 451 GNVENVMQIAHEMV 464
G ++ +++ EM+
Sbjct: 517 GEIDEAIKLLSEMM 530
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 139/297 (46%), Gaps = 7/297 (2%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLL----AYNTMINGFCKKGELEEAKK 247
PD+S+ + RG +++ F + NL+ N M+ G+LEE
Sbjct: 80 PDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAY 139
Query: 248 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 307
+ M R + + TY + L + G + +A + KMR GF N ++ ++ L
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 308 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 367
+A+ R ++ P +++Y ++ G K D + LLKEM GLKP V+
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 368 SFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
+F R+L G+++ A +LK+M C P+ V+Y +I LC A+ ++ +++ ++
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTAR-KLDCAKEVFEK 318
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
M H D Y LL + + ++++V Q EM K G + + F T +VDAL
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM-EKDGHVPDVVTF-TILVDAL 373
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 195/486 (40%), Gaps = 81/486 (16%)
Query: 83 PNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAA 142
P+ Y+ CY+ + ++ I + + +++N + ++ LI V A
Sbjct: 501 PDSVTYNMMMKCYSKVGEI---DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 143 IFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVP----------- 191
F + K+++ + +YN+LL L + I+ A E F +V++ P
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 192 -----------------------PDVSTYTTMIRGYCKMGMIENAKKVFDVMT--VKPNL 226
PDV TY T+I G K G ++ A F M V P+
Sbjct: 618 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDF 677
Query: 227 LAYNTMINGFCKKGELEEAKKCM-NEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMA 285
+ T++ G K +E+A K + N + N +P L + +I + +D A
Sbjct: 678 VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSE 737
Query: 286 KMRLNGF-----------------KDNVSTHKSML----KGLCVVGKFDQAVGYLRNVME 324
++ NG +NVS +++ K L V K + ++E
Sbjct: 738 RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797
Query: 325 ANM----------------NPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
A+M PDV +Y +++ + K GK DE L KEM + +
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTIT 857
Query: 369 FNAVFRILVENGELDRAI-LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR 427
N V LV+ G +D A+ L M D P +Y +I GL + GR+ + + L +
Sbjct: 858 HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS-GRLYEAKQLFEG 916
Query: 428 MIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDALLLM 487
M+ G + +Y+ L+ G+ + G + + MV K+G LK + + +VD L ++
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV-KEGVRPDLKTY-SVLVDCLCMV 974
Query: 488 WIVTGG 493
V G
Sbjct: 975 GRVDEG 980
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 12/205 (5%)
Query: 146 FHQAKQIENGACLYS-------YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198
++AKQ+ G Y YN L+ + A F ++VKE V PD+ TY+
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV-RPDLKTYS 965
Query: 199 TMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEM-MN 254
++ C +G ++ F + + P+++ YN +ING K LEEA NEM +
Sbjct: 966 VLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Query: 255 RGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQ 314
RG P+ TYN++I L I G V+EA + +++ G + NV T ++++G + GK +
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1085
Query: 315 AVGYLRNVMEANMNPDVKSYEVVIN 339
A + ++ +P+ +YE + N
Sbjct: 1086 AYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 137/337 (40%), Gaps = 41/337 (12%)
Query: 169 VRVNSIKLAE-EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
+RV+ KL E + ++++ ++ D +TY T+ + G ++ A M
Sbjct: 128 LRVDG-KLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVL 186
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 284
N +YN +I+ K EA + M+ G RP+ TY++++ GL +D L+
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 285 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 344
+M G K NV T ++ L GK ++A L+ + + PDV +Y V+I+ C
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 345 GKSDEA-------------------ISLL----------------KEMRARGLKPTVFSF 369
K D A I+LL EM G P V +F
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMI 429
+ L + G A L M LPN +YNT+ICGL R+ D +L M
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH-RLDDALELFGNME 425
Query: 430 RSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
G Y + Y + G+ + ++ +M TK
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 137 GNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVST 196
G V + +F + K+ + YN ++ L + + ++ A F+++ + PD+ T
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Query: 197 YTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMM 253
Y ++I GM+E A K+++ + ++PN+ +N +I G+ G+ E A M+
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Query: 254 NRGCRPNELTYNAM 267
G PN TY +
Sbjct: 1095 TGGFSPNTGTYEQL 1108
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 163/311 (52%), Gaps = 8/311 (2%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENV-VPPDVSTYTTMIRGYCKMGMIENAKKV 216
+ ++ LL + ++N L Q+ +N+ + ++ TY+ I +C+ + A +
Sbjct: 75 IVEFSKLLSAIAKMNKFDLVISLGEQM--QNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 217 FDVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI 273
M P+++ N+++NGFC + EA +++M+ G +P+ +T+ +++GL
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 274 NGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKS 333
+ + EA L+ +M + G + ++ T+ +++ GLC G+ D A+ L + + + DV
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 334 YEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMP 393
Y +I+G CK D+A L +M +G+KP VF++N + L G A LL M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 394 QMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL-DFTMYSCLLKGYCEEGN 452
+ + P+ V +N +I + +G++ + E L D M++S H D Y+ L+KG+C+
Sbjct: 313 EKNINPDLVFFNALIDAF-VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 453 VENVMQIAHEM 463
VE M++ EM
Sbjct: 372 VEEGMEVFREM 382
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 178/362 (49%), Gaps = 8/362 (2%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
S I + R + A+ + ++ G + + NSLL N I A Q+V
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV- 172
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGELE 243
E PD T+TT++ G + A + + M VK P+L+ Y +ING CK+GE +
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
A +N+M + + YN +I GLC +D+A L KM G K +V T+ ++
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM-RARGL 362
LC G++ A L +++E N+NPD+ + +I+ F K GK EA L EM +++
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVE 422
P V ++N + + + ++ + + ++M Q + N V+Y T+I G A+ + +
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD-CDNAQ 411
Query: 423 DLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVD 482
+ +M+ G + D Y+ LL G C GNVE + + E + K+ L + + T +++
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL-VVFEYMQKRDMKLDIVTY-TTMIE 469
Query: 483 AL 484
AL
Sbjct: 470 AL 471
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 164/344 (47%), Gaps = 6/344 (1%)
Query: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185
SKL+ A I Q + + LY+Y+ + R + + LA +++
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGEL 242
K P + T +++ G+C I A + D M +P+ + + T+++G + +
Sbjct: 138 KLG-YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA + M+ +GC+P+ +TY A+I GLC G D A L+ KM + +V + ++
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GLC D A + + PDV +Y +I+ C G+ +A LL +M + +
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 363 KPTVFSFNAVFRILVENGELDRAILLLKQMPQMD-CLPNFVSYNTIICGLCMAKGRMQDV 421
P + FNA+ V+ G+L A L +M + C P+ V+YNT+I G C K R+++
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK-RVEEG 375
Query: 422 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 465
++ M + G + Y+ L+ G+ + + +N + +MV+
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 131/238 (55%), Gaps = 3/238 (1%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +N+L+ V+ + AE+ + ++VK PDV Y T+I+G+CK +E +VF
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 218 DVMTVKP---NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
M+ + N + Y T+I+GF + + + A+ +M++ G P+ +TYN ++ GLC N
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G V+ A ++ M+ K ++ T+ +M++ LC GK + ++ + P+V +Y
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+++GFC+ G +EA +L EM+ G P ++N + R + +G+ + L+K+M
Sbjct: 500 TTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 181/384 (47%), Gaps = 10/384 (2%)
Query: 88 YHHTTPCYTAITDVLLSHSLISIAASLLKN---SNKLSDFFI-SKLIKAYGDRGNVKAAI 143
Y T +T + L H+ S A +L++ D +I RG A+
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 144 FWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
++ ++ + A + YN+++ L + + A + F+++ + + PDV TY +I
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI-KPDVFTYNPLISC 294
Query: 204 YCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELEEAKKCMNEMM-NRGCRP 259
C G +A ++ M + P+L+ +N +I+ F K+G+L EA+K +EM+ ++ C P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 260 NELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYL 319
+ + YN +I G C RV+E + +M G N T+ +++ G D A
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 320 RNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN 379
+ ++ ++PD+ +Y ++++G C G + A+ + + M+ R +K + ++ + L +
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 380 GELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTM 439
G+++ L + PN V+Y T++ G C KG ++ + L M G +
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC-RKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 440 YSCLLKGYCEEGNVENVMQIAHEM 463
Y+ L++ +G+ ++ EM
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEM 557
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 134/279 (48%), Gaps = 4/279 (1%)
Query: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGELEEAKKC 248
P + ++ ++ KM + + + M + NL Y+ IN FC++ +L A
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 249 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 308
+ +MM G P+ +T N+++ G C R+ EA L+ +M G++ + T +++ GL
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 309 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 368
K +AV + ++ PD+ +Y VING CK G+ D A++LL +M ++ V
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 369 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
+N + L + +D A L +M P+ +YN +I LC GR D L+ M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC-NYGRWSDASRLLSDM 311
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKK 467
+ N D ++ L+ + +EG + ++ EMV K
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Query: 125 FISKLIKAYGDRGN-VKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQ 183
F + LI A+ G V+A + K + +YN+L+ + ++ E F +
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 184 IVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKG 240
+ + +V V TYTT+I G+ + +NA+ VF M V P+++ YN +++G C G
Sbjct: 382 MSQRGLVGNTV-TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+E A M R + + +TY MI LC G+V++ L + L G K NV T+
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+M+ G C G ++A + E P+ +Y +I + G + L+KEMR+
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560
Query: 361 GLKPTVFSFNAVFRILVENGELDRAIL 387
G +F V +L +G LD++ L
Sbjct: 561 GFAGDASTFGLVTNML-HDGRLDKSFL 586
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+L++A +M+ P+ + ++ ++ + + D L +M+ G N+ T+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
+ C + A+ L +M+ P + + ++NGFC + EA++L+ +M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G +P +F + L ++ + A+ L+++M C P+ V+Y +I GLC +G
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC-KRGEPDL 233
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
+L+++M + D +Y+ ++ G C+ ++++ + ++M TK
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 172/373 (46%), Gaps = 40/373 (10%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
LI Y GN + + + K L ++N+LL L + ++ AE ++
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 189 VVPPDVSTYTTMIRGY-----------------------------------CKMGMIENA 213
VP D T++ + GY CK G IE A
Sbjct: 315 FVP-DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 214 KKVFDVMTVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
+++ K PN + YNTMI+G+C+KG+L A+ + M +G +P+ L YN +I
Sbjct: 374 EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRR 433
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
C G ++ A+ + KM+L G +V T+ ++ G +FD+ L+ + + P+
Sbjct: 434 FCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 390
V SY +IN CK K EA + ++M RG+ P V +N + G+++ A K
Sbjct: 494 VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSK 553
Query: 391 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 450
+M + N V+YNT+I GL M G++ + EDL+ + R G D Y+ L+ GY
Sbjct: 554 EMLKKGIELNLVTYNTLIDGLSMT-GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612
Query: 451 GNVENVMQIAHEM 463
GNV+ + + EM
Sbjct: 613 GNVQRCIALYEEM 625
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 198/416 (47%), Gaps = 44/416 (10%)
Query: 108 ISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGV 167
I++ ++L++ + S F K I+A +V + F++ K ++ YN L+
Sbjct: 164 INVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDG 223
Query: 168 LVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKP 224
L + + AE+ F +++ ++P + TY T+I GYCK G E + KV + M ++P
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLI-TYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 225 NLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG-------------- 270
+L+ +NT++ G K G +E+A+ + EM + G P+ T++ + G
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 271 ---------------------LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVV 309
LC G++++A+ ++ + G N + +M+ G C
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 310 GKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSF 369
G A + + + M PD +Y +I FC++G+ + A + +M+ +G+ P+V ++
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 370 NAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDR-M 428
N + E D+ +LK+M +PN VSY T+I C+ KG +V R M
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN--CLCKGSKLLEAQIVKRDM 520
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKGRLLKLKNFLTRVVDAL 484
G + +Y+ L+ G C +G +E+ + + EM+ KKG L L + T ++D L
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML-KKGIELNLVTYNT-LIDGL 574
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 164/343 (47%), Gaps = 19/343 (5%)
Query: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
+I Y +G++ A ++ +YN L+ + ++ AE+ +++ K
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM-KLK 453
Query: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT------VKPNLLAYNTMINGFCKKGEL 242
V P V TY +I GY G K FD++ PN+++Y T+IN CK +L
Sbjct: 454 GVSPSVETYNILIGGY---GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 243 EEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSM 302
EA+ +M +RG P YN +I G C G++++A +M G + N+ T+ ++
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 303 LKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
+ GL + GK +A L + + PDV +Y +I+G+ G I+L +EM+ G+
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 363 KPTVFSFNAVFRILVENG-ELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA-KGRMQD 420
KPT+ +++ + + + G EL + +M P+ + YN ++ C A G M+
Sbjct: 631 KPTLKTYHLLISLCTKEGIELTERLF-----GEMSLKPDLLVYNGVLH--CYAVHGDMEK 683
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEM 463
+L +MI LD T Y+ L+ G + G + V + EM
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 726
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 154/306 (50%), Gaps = 5/306 (1%)
Query: 164 LLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT-- 221
LL LV+ ++ F I++ + P Y I+ K+ + ++F+ M
Sbjct: 150 LLDHLVKTKQFRVTINVFLNILESDFRPSKF-MYGKAIQAAVKLSDVGKGLELFNRMKHD 208
Query: 222 -VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 280
+ P++ YN +I+G CK + +A++ +EM+ R P+ +TYN +I G C G +++
Sbjct: 209 RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS 268
Query: 281 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 340
+ +M+ + + ++ T ++LKGL G + A L+ + + PD ++ ++ +G
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328
Query: 341 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPN 400
+ K++ A+ + + G+K ++ + + L + G++++A +L + +PN
Sbjct: 329 YSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Query: 401 FVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIA 460
V YNT+I G C KG + ++ M + G D Y+CL++ +CE G +EN +
Sbjct: 389 EVIYNTMIDGYC-RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 461 HEMVTK 466
++M K
Sbjct: 448 NKMKLK 453
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 114/238 (47%), Gaps = 8/238 (3%)
Query: 158 LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVF 217
L +YN+L+ L + AE+ +I ++ + PDV TY ++I GY G ++ ++
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL-KPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 218 DVMT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 274
+ M +KP L Y+ +I+ C K +E ++ EM +P+ L YN +++ ++
Sbjct: 623 EEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVH 678
Query: 275 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 334
G +++A L +M + +T+ S++ G VGK + + + M P+ +Y
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
Query: 335 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 392
+++ G C++ A +EM+ +G V N + L E A +++ +M
Sbjct: 739 NIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 41/272 (15%)
Query: 95 YTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAK 150
Y + D L +S A LL + K F + LI YG GNV+ I + + K
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 151 QIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMI 210
+ + + P + TY +I K G I
Sbjct: 627 R------------------------------------SGIKPTLKTYHLLISLCTKEG-I 649
Query: 211 ENAKKVFDVMTVKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 270
E +++F M++KP+LL YN +++ + G++E+A +M+ + ++ TYN++I G
Sbjct: 650 ELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILG 709
Query: 271 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 330
G++ E + L+ +M + T+ ++KG C V + A + R + E D
Sbjct: 710 QLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLD 769
Query: 331 VKSYEVVINGFCKIGKSDEAISLLKEMRARGL 362
V +++G + +S EA ++ EM R L
Sbjct: 770 VCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
+ EA L +R G + + +L L +F + N++E++ P Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
I K+ + + L M+ + P+VF +N + L + ++ A L +M
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 397 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENV 456
LP+ ++YNT+I G C A G + + +RM ++ LLKG + G VE+
Sbjct: 245 LLPSLITYNTLIDGYCKA-GNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 457 MQIAHEM 463
+ EM
Sbjct: 304 ENVLKEM 310
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 160/309 (51%), Gaps = 5/309 (1%)
Query: 127 SKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK 186
+ LI+ ++ A+ F+Q + + +YN+L+ L + A ++K
Sbjct: 192 TTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK 251
Query: 187 ENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGELE 243
+ P+V T+T +I + K+G + AK++++VM +V P++ Y ++ING C G L+
Sbjct: 252 RRI-EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 244 EAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSML 303
EA++ M GC PNE+ Y +I+G C + RV++ + +M G N T+ ++
Sbjct: 311 EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
Query: 304 KGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLK 363
+G C+VG+ D A + PD+++Y V+++G C GK ++A+ + + MR R +
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Query: 364 PTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVED 423
+ ++ + + + + G+++ A L + PN ++Y T+I G C +G + + +
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC-RRGLIHEADS 489
Query: 424 LVDRMIRSG 432
L +M G
Sbjct: 490 LFKKMKEDG 498
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 158/311 (50%), Gaps = 5/311 (1%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
+ LL V+ ++N + F Q+ + PP + T ++ C A M
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGI-PPLLCTCNIVMHCVCLSSQPCRASCFLGKM 144
Query: 221 T---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+P+L+ + +++NG+C +E+A ++++ G +PN +TY +I LC N +
Sbjct: 145 MKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHL 204
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 337
+ A L +M NG + NV T+ +++ GLC +G++ A LR++M+ + P+V ++ +
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 338 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDC 397
I+ F K+GK EA L M + P VF++ ++ L G LD A + M + C
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 398 LPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVM 457
PN V Y T+I G C +K R++D + M + G + Y+ L++GYC G +
Sbjct: 325 YPNEVIYTTLIHGFCKSK-RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 458 QIAHEMVTKKG 468
++ ++M +++
Sbjct: 384 EVFNQMSSRRA 394
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 135/244 (55%), Gaps = 4/244 (1%)
Query: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
++ +L+ V+V + A+E ++ +++ +V P DV TY ++I G C G+++ A+++F +
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYP-DVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 220 MT---VKPNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGR 276
M PN + Y T+I+GFCK +E+ K EM +G N +TY +I G C+ GR
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 277 VDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEV 336
D A+ + +M ++ T+ +L GLC GK ++A+ + + M+ ++ +Y +
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 337 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 396
+I G CK+GK ++A L + ++G+KP V ++ + G + A L K+M +
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Query: 397 CLPN 400
LPN
Sbjct: 499 FLPN 502
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 36/278 (12%)
Query: 224 PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 283
P+++ + +++ K + +M G P T N +++ +C++ + A
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 284 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 343
+ KM GF+ ++ T S+L G C + + A+ ++ P+V +Y +I CK
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 344 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQ------------ 391
+ A+ L +M G +P V ++NA+ L E G A LL+
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 392 -----------------------MPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 428
M QM P+ +Y ++I GLCM G + + + M
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY-GLLDEARQMFYLM 319
Query: 429 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTK 466
R+G + +Y+ L+ G+C+ VE+ M+I +EM K
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 4/178 (2%)
Query: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVM 220
Y +L+ + ++ + F+++ ++ VV + TYT +I+GYC +G + A++VF+ M
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI-TYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 221 TVK---PNLLAYNTMINGFCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 277
+ + P++ YN +++G C G++E+A M R N +TY +I G+C G+V
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 278 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYE 335
++A L + G K NV T+ +M+ G C G +A + + E P+ Y+
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
Query: 241 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 300
+ +A M++ P+ + + ++ + R D L +M++ G + T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 301 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 360
++ +C+ + +A +L +M+ PD+ ++ ++NG+C + ++AI+L ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 361 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 420
G KP V ++ + R L +N L+ A+ L QM PN V+YN ++ GLC GR D
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC-EIGRWGD 241
Query: 421 VEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMV 464
L+ M++ + ++ L+ + + G + ++ + M+
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,174,291
Number of Sequences: 539616
Number of extensions: 7546571
Number of successful extensions: 27672
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 18347
Number of HSP's gapped (non-prelim): 2621
length of query: 526
length of database: 191,569,459
effective HSP length: 122
effective length of query: 404
effective length of database: 125,736,307
effective search space: 50797468028
effective search space used: 50797468028
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)