BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043072
(267 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/241 (62%), Positives = 180/241 (74%), Gaps = 12/241 (4%)
Query: 1 MDVDMIKASQQAEDHMDMMAVIMQMEKLPEFC-EAFNN--NISPLPHEIHFSNANTNSNI 57
MDVDM+K+S E++MDMM V+MQMEKLP+FC E F+N N S + EI FSN N S +
Sbjct: 1 MDVDMMKSSS-GEENMDMMTVMMQMEKLPDFCSEPFHNTTNTSTILQEIQFSNGNPTSIV 59
Query: 58 STQPIYHNPNNYVSSPPPTFTNPS-SSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKT 116
++ PIYHN N + SSPP F NP S+P TP+QEPMTPPL Q N + + T
Sbjct: 60 ASPPIYHN-NPHASSPP--FINPPPCSMPFM---GTPIQEPMTPPL-QHNMMANKFKYST 112
Query: 117 SLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAA 176
+ + + ++EK+N A +R+M FRIAAMQPIHIDPES+KPPKRRNVKISKDPQSVAA
Sbjct: 113 PFSNANSFLSSIEKKNPTAEIRDMTFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAA 172
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVG 236
RHRRE ISER+RILQR+VPGGTKMDTASMLDEAIHYVKFLKKQV +LEQAGA+ P G
Sbjct: 173 RHRRERISERMRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEQAGANTPNGWFW 232
Query: 237 F 237
Sbjct: 233 L 233
>gi|224084350|ref|XP_002307268.1| predicted protein [Populus trichocarpa]
gi|222856717|gb|EEE94264.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/256 (61%), Positives = 186/256 (72%), Gaps = 13/256 (5%)
Query: 1 MDVDMIKASQQAEDHMDMMAVIMQMEKLPEFC-EAFNN--NISPLPHEIHFSNANTNSN- 56
MDVDM+K+S E+HMDMM ++MQMEKLP+FC E F N N S L EI FSN N +N
Sbjct: 1 MDVDMMKSSS-GEEHMDMMTMMMQMEKLPDFCSEPFYNTTNTSTLLQEIQFSNGNPTANT 59
Query: 57 ISTQPIYHNPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKT 116
+++ PI+HNP + SSPP NP S+P TP+QEP+TP L Q + + T
Sbjct: 60 VASPPIWHNP--HASSPP--LINPPCSMPFM---GTPIQEPVTPSL-QHDMMAKKFEYGT 111
Query: 117 SLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAA 176
+ + + ++EK+NS +REMIFRIAAMQP HIDPES+KPPKR+NVKISKDPQSVAA
Sbjct: 112 PFSNANSFLSSIEKKNSTTTIREMIFRIAAMQPAHIDPESVKPPKRKNVKISKDPQSVAA 171
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVG 236
RHRRE ISERIRILQR+VPGGTKMDTASMLDEAIHYVKFLK QV +LEQ GA+RPMGG
Sbjct: 172 RHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKMQVQSLEQTGANRPMGGFV 231
Query: 237 FQGAPMAGVAYPSLVK 252
G M V Y SLVK
Sbjct: 232 ITGVTMPSVGYSSLVK 247
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 149/265 (56%), Positives = 171/265 (64%), Gaps = 48/265 (18%)
Query: 1 MDVDMIKASQQAEDHMDMMAVIMQMEKLPEFCEAF---NNNISPLPHEIHFSNANTNSNI 57
MDVD++K S MDMM +MQMEK PEFCE F NNN S P ++ N ++
Sbjct: 1 MDVDILKTSTSDNISMDMMMTMMQMEKFPEFCEPFYNNNNNTSTAP--LYPENELLINST 58
Query: 58 STQPIY----HNPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGR 113
+T P++ +NPN V +PPP+ +N FI Q+PMTP L
Sbjct: 59 TTLPVFSNVINNPN--VITPPPSSSN-------FIQ-----QQPMTPHLE---------- 94
Query: 114 LKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQS 173
P LEKRNS+AAMREMIFR+A MQPIHIDPESIKPPKRRNVKISKDPQS
Sbjct: 95 ------------PNLEKRNSVAAMREMIFRVAVMQPIHIDPESIKPPKRRNVKISKDPQS 142
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
VAARHRRE ISERI+ILQR+VPGGTKMDTASMLDEAIHYVKFLKKQV TLEQAGA RP+
Sbjct: 143 VAARHRRERISERIKILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRPLN 202
Query: 234 GVGF---QGAPMAGVAYPSLVKASH 255
VGF +Y VK+ H
Sbjct: 203 VVGFPTTASNANNNNSYSGFVKSCH 227
>gi|225438732|ref|XP_002277850.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|296082413|emb|CBI21418.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 229 bits (584), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 163/272 (59%), Positives = 192/272 (70%), Gaps = 25/272 (9%)
Query: 1 MDVDMIKASQQAEDHMDMMAVIMQMEKLPEFCEAFNNNISPLPHEIHFSNANTNSNISTQ 60
MD+D++K++ +D MDMM+++MQM+KLPE + S LP E+ FS T + I T
Sbjct: 1 MDIDVLKST--VQDQMDMMSMMMQMDKLPELFGPYQEP-SELP-EMEFSGGATATTIGTA 56
Query: 61 P-IYHNPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTS-- 117
P ++H+P NPSSS+ +TPVQEPMTPPL P+ V GRLK++
Sbjct: 57 PPMFHSP----------LINPSSSISFM---STPVQEPMTPPL-LPH--VGSGRLKSAGE 100
Query: 118 LPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAAR 177
L +P+ P EK+NSMAAMREMIF IA MQPIHIDPES+KPPKRRNVKISKDPQSVAAR
Sbjct: 101 LCGVNPFSPPSEKKNSMAAMREMIFSIAVMQPIHIDPESVKPPKRRNVKISKDPQSVAAR 160
Query: 178 HRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGF 237
HRRE ISERIRILQR+VPGGTKMDTASMLDEAIHYVKFLK QV +LE+AGAHRPMG VGF
Sbjct: 161 HRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKNQVQSLERAGAHRPMGVVGF 220
Query: 238 QG--APMAGVAYPSLVKASHQMVDNINMQMFR 267
MA Y SL KA +MQMFR
Sbjct: 221 PATTTSMANPNYSSLAKAFQTSPMVGSMQMFR 252
>gi|255565212|ref|XP_002523598.1| DNA binding protein, putative [Ricinus communis]
gi|223537160|gb|EEF38793.1| DNA binding protein, putative [Ricinus communis]
Length = 278
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/297 (55%), Positives = 191/297 (64%), Gaps = 49/297 (16%)
Query: 1 MDVDMIKASQQAEDH----MDMMAVIMQMEKLPEFCEAFNNNISPLP---HEIHFSNANT 53
MDVDMIK+S DH +DMM ++MQMEKLP+FC+ F+NN S EI FSN +
Sbjct: 1 MDVDMIKSSSSGGDHHQEHIDMMTMMMQMEKLPDFCDPFHNNSSSSSSSLQEIQFSNGHN 60
Query: 54 NSNIST-----QPIYHNPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNV 108
++N +T PIYH+ PT NP S+ TTP+Q P N
Sbjct: 61 SNNNNTILPNSPPIYHHS--------PTLINPPPSISFM--ATTPIQGP---------NT 101
Query: 109 VTGGRLKTSL-----PSPSPYPP----------TLEKRNSMAAMREMIFRIAAMQPIHID 153
+T G L L S YPP ++EK+NS AA+REMIFRIAAMQPIHID
Sbjct: 102 MTTGSLHQQLQHNMFSSKFKYPPPFSNANSFLSSMEKKNSTAAIREMIFRIAAMQPIHID 161
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
PESIKPPKRRNVKISKDPQSVAARHRRE ISERIRILQR+VPGGTKMDTASMLDEAIHYV
Sbjct: 162 PESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYV 221
Query: 214 KFLKKQVHTLEQAGAHRPMG-GVGFQGAPMAGVAYPSLVKASHQMVDNI--NMQMFR 267
KFLKKQV +LEQAGA+R MG G F G M + Y SL+K N+ +MQM R
Sbjct: 222 KFLKKQVQSLEQAGANRSMGAGFPFSGLTMPNMGYSSLLKNCQPAHPNMVSSMQMLR 278
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/238 (57%), Positives = 169/238 (71%), Gaps = 19/238 (7%)
Query: 1 MDVDMIKASQQAEDHMDMMAVIMQMEKLPEFCEAFNNNISPLPHEIHFSNANTNSNISTQ 60
MD+D++K++ + + M ++MQM+KLPEFC +N ++ LP + FS + +T
Sbjct: 1 MDIDLLKSAPEDQ----MEMMMMQMDKLPEFCGTYNE-MAELP-SMGFSGGGS----ATM 50
Query: 61 P-IYHNPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTSLP 119
P I+ NP +V+SP TF N S++ N TTP QEP T P N+ V R L
Sbjct: 51 PQIFDNP--HVASP--TFINSPSTISF--NGTTPPQEP-TAPAFLTNSAVARWRGTGELS 103
Query: 120 SPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHR 179
+KRNSMAAMREMIFRIAAMQP+HIDPES+KPPKRRNVKISKDPQSVAARHR
Sbjct: 104 GVCNLSTPAQKRNSMAAMREMIFRIAAMQPVHIDPESVKPPKRRNVKISKDPQSVAARHR 163
Query: 180 REMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGF 237
RE ISE+IRILQR+VPGGTKMDTASMLDEAIHYVKFLK QV +LE+A A+RP G+GF
Sbjct: 164 RERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP-AGIGF 220
>gi|255538274|ref|XP_002510202.1| transcription factor, putative [Ricinus communis]
gi|223550903|gb|EEF52389.1| transcription factor, putative [Ricinus communis]
Length = 274
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/267 (54%), Positives = 176/267 (65%), Gaps = 22/267 (8%)
Query: 1 MDVDMIKASQQAEDHMDMMAVIMQMEKLPEFCEAFNNNISPLPHEIHFSNANTNSNISTQ 60
M++D + +S ED M+M IM M+KLP+F A+N+ L F A+T S +
Sbjct: 1 MEIDQLTSSTATEDQMEM---IMMMDKLPDFFGAYNDVAHDLAPTTEFPGASTTSTTAVS 57
Query: 61 PIYHNPNNYVSSP----PPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKT 116
I H ++SSP P+F + SS+P F N TP+Q+ TPP +N+ R +
Sbjct: 58 AIPH----FMSSPHIASSPSFMSLPSSVP-FTNNNTPMQDESTPPF--TSNLAAAERWRD 110
Query: 117 --SLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSV 174
P + Y +KRNSMAAMREMIFRIAAMQPIHIDPES+KPPKRRNVKISKDPQSV
Sbjct: 111 MGEFPGANAYSTPSQKRNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSV 170
Query: 175 AARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRP--- 231
AARHRRE ISERIRILQR+VPGGTKMDTASMLDEAIHYVKFLK QV +LE+A A RP
Sbjct: 171 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAQASRPSTS 230
Query: 232 --MGGVGFQGAPMAGVAYPSLVKASHQ 256
G+GF A +G +P + KA Q
Sbjct: 231 SSSTGIGFPIAMSSGSYFP-MGKAYQQ 256
>gi|356541813|ref|XP_003539367.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 242
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 146/244 (59%), Positives = 165/244 (67%), Gaps = 45/244 (18%)
Query: 1 MDVDMIKASQQAEDHMDMMAVIMQMEKLPEFCEAF---NNNISPLPHEIHFSNANTNSNI 57
MDVD++K S MDMM +MQMEK PEFCE F NNN S P ++ N ++
Sbjct: 1 MDVDILKTSTSDNISMDMMMTMMQMEKFPEFCEPFYNNNNNTSTAP--LYPENELLINST 58
Query: 58 STQPIY----HNPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGR 113
+T P++ +NPN V +PPP+ +N FI Q+PMTP L
Sbjct: 59 TTLPVFSNVINNPN--VITPPPSSSN-------FIQ-----QQPMTPHLE---------- 94
Query: 114 LKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQS 173
P LEKRNS+AAMREMIFR+A MQPIHIDPESIKPPKRRNVKISKDPQS
Sbjct: 95 ------------PNLEKRNSVAAMREMIFRVAVMQPIHIDPESIKPPKRRNVKISKDPQS 142
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
VAARHRRE ISERIRILQR+VPGGTKMDTASMLDEAIHYVKFLKKQV TLEQAGA RP+
Sbjct: 143 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRPLN 202
Query: 234 GVGF 237
VGF
Sbjct: 203 VVGF 206
>gi|356496900|ref|XP_003517303.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 251
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/268 (54%), Positives = 165/268 (61%), Gaps = 45/268 (16%)
Query: 1 MDVDMIKASQQAEDHMDMMAVIMQMEKLPEFCEAFNNNISP--------LPHEIHFSNAN 52
MDVD +K S MM + MQMEK PEFCE F NN + P +F N+
Sbjct: 1 MDVDKLKTSTSDSSMDMMMMM-MQMEKFPEFCEPFYNNNTTTTTTTTLLYPENEYFLNST 59
Query: 53 TNSNISTQPIYHNPNN--YVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVT 110
T +T P++ N NN ++ PP T NP F+ +Q+PMTP L
Sbjct: 60 T----TTLPVFPNVNNPNVITPPPTTLINPPPPSSNFV-----LQQPMTPHLE------- 103
Query: 111 GGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKD 170
P EK+NS+AAMREMIFR+A MQP+HIDPESIKPPKRRNVKISKD
Sbjct: 104 ---------------PNPEKKNSVAAMREMIFRVAVMQPVHIDPESIKPPKRRNVKISKD 148
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHR 230
PQSVAARHRRE ISERIRILQR+VPGGTKMDTASMLDEAIHYVKFLKKQV TLEQAGA R
Sbjct: 149 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGATR 208
Query: 231 PMGGVGFQGAPMAG---VAYPSLVKASH 255
P+ VGF V Y S VK+
Sbjct: 209 PLNVVGFPTTVSNANNNVNYSSFVKSCQ 236
>gi|357482887|ref|XP_003611730.1| Transcription factor HEC2 [Medicago truncatula]
gi|355513065|gb|AES94688.1| Transcription factor HEC2 [Medicago truncatula]
Length = 247
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 149/211 (70%), Gaps = 22/211 (10%)
Query: 63 YHNPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVT---GGRLKTSLP 119
Y N +N SS P+ NP S PL Q+PMTPPL QPN V T GR S
Sbjct: 51 YGN-SNVTSSLTPSLINPPLSYPL--------QQPMTPPLLQPNRVQTQIPSGRNNNSSL 101
Query: 120 SPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHR 179
S YP EK+NSM+AMREMIFR+A MQPI+IDPE+IKPPKR+NVKISKDPQSVAARHR
Sbjct: 102 S---YP---EKKNSMSAMREMIFRMAVMQPINIDPETIKPPKRKNVKISKDPQSVAARHR 155
Query: 180 REMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQG 239
RE ISERIRILQR+VPGGTKMDTASMLDEAIHYVKFLKKQV TLEQ GA+RP+ VGF G
Sbjct: 156 RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQVGANRPLNVVGFPG 215
Query: 240 -APMAGVAYPSLVKASH---QMVDNINMQMF 266
A +Y SL++ QMV + QM
Sbjct: 216 VVSNANFSYSSLIRGCSQPCQMVGPTSKQML 246
>gi|224137546|ref|XP_002327153.1| predicted protein [Populus trichocarpa]
gi|222835468|gb|EEE73903.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/251 (53%), Positives = 168/251 (66%), Gaps = 13/251 (5%)
Query: 1 MDVDMIKASQQAEDHMDMMAVIMQMEKLPEFCEAFNNNISPLPHEIHFSNANTNSNISTQ 60
M++D++K++ ED +MM M ++K PEF A N+ L F A+ + S+
Sbjct: 1 MEIDLLKSA--TEDQTEMM---MMIDKFPEFYGACNDVADHLSPTDQFLAASVSD--SSV 53
Query: 61 PIYHNPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTSLP- 119
P ++ N + ++ PP F N S+L F + TP+Q+ +P N + R LP
Sbjct: 54 PHFNTDNPHSANLPP-FMNLPSTLS-FNSNNTPIQD-QSPRAFISNPSTSRWRGVGELPG 110
Query: 120 SPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHR 179
+ + Y K+NSMAAMREMIFRIAAMQPIHIDPES+KPPKRRNVKISKDPQSVAARHR
Sbjct: 111 TANDYATPSRKKNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHR 170
Query: 180 REMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG--GVGF 237
RE ISERIRILQR+VPGGTKMDTASMLDEAIHYVKFLK QV +LE+A A+RP G+GF
Sbjct: 171 RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAQANRPTATTGIGF 230
Query: 238 QGAPMAGVAYP 248
A +G P
Sbjct: 231 PVAMTSGSYLP 241
>gi|224063507|ref|XP_002301178.1| predicted protein [Populus trichocarpa]
gi|222842904|gb|EEE80451.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 178/263 (67%), Gaps = 24/263 (9%)
Query: 1 MDVDMIKASQQAEDHMDMMAVIMQMEKLPEFCEAFNNNISPL-PHEIHFSNANTNSNIST 59
M++D ++++ ED M+MM M M+KLPEF +++N+ L P E ++A SNIS
Sbjct: 1 MEIDQLRSA--TEDQMEMM---MLMDKLPEFYDSYNDVADHLSPTEFLAASA---SNIS- 51
Query: 60 QPIYH----NPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLK 115
I H NP+N SSPP F N S+L + +TP Q+ +P P+ + R
Sbjct: 52 --ISHFNTDNPHN-ASSPP--FMNLQSTLSS-NSNSTPTQD-QSPQDFFPSPSSSRWRGL 104
Query: 116 TSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVA 175
LP + Y +K+NSMA MREMIFRIAAMQPI IDPES+KPPKRRNVKISKDPQSVA
Sbjct: 105 GELPEANDYATPSQKKNSMATMREMIFRIAAMQPIQIDPESVKPPKRRNVKISKDPQSVA 164
Query: 176 ARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRP--MG 233
ARHRRE ISERIRILQR+VPGGTKMDTASMLDEAIHYVKFLK QV +LE+ A+RP
Sbjct: 165 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERFQANRPTTTT 224
Query: 234 GVGFQGAPMAGVAYPSLVKASHQ 256
G+GF A +G +Y ++ K HQ
Sbjct: 225 GIGFPVAMTSG-SYLAMGKGYHQ 246
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/265 (50%), Positives = 169/265 (63%), Gaps = 31/265 (11%)
Query: 1 MDVDMIKASQQA-EDHMDMMAVIMQMEKLPEFCEAFNNN--ISPLP-HEIHF---SNANT 53
MD + +K+S + E+ +DMM + M +LPEF + NN I+ P + F SNA+
Sbjct: 1 MDCNQLKSSSSSSEEQIDMMLM--MMMQLPEFSSSNGNNNTINQFPPSDQQFYGTSNASN 58
Query: 54 NSNISTQPIYHNPNNYVSSPPPTFTN-PSSS------LPLFINTTTPV--QEPMTPPLHQ 104
N+ I + PN S +FT+ PS S + N +TP+ Q+ T PL
Sbjct: 59 NTRPLADLIDNPPNQIPWSSSSSFTHLPSQSTTNTNTIYFTNNNSTPLMFQQQQTTPLMF 118
Query: 105 PN--NVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKR 162
N N + SPS EKRNSMAAMREMIFRIAAMQPI+IDPES+KPPKR
Sbjct: 119 SNSSNEIAPNTNHYGTASPS------EKRNSMAAMREMIFRIAAMQPIYIDPESVKPPKR 172
Query: 163 RNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHT 222
RNVKISKDPQS+AARHRRE ISE+IRILQR+VPGGTKMDTASMLDEAIHYVKFLK Q+ +
Sbjct: 173 RNVKISKDPQSIAARHRRERISEKIRILQRMVPGGTKMDTASMLDEAIHYVKFLKTQLKS 232
Query: 223 LEQ----AGAHRPMGGVGFQGAPMA 243
L++ A ++R + G G G P++
Sbjct: 233 LQERASGANSNRTVAGSGL-GFPVS 256
>gi|356511883|ref|XP_003524651.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 273
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/110 (89%), Positives = 102/110 (92%), Gaps = 2/110 (1%)
Query: 120 SPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHR 179
S PYP EK+NSMAAMREMIFRIA MQP+HIDPESIKPPKRRNVKISKDPQSVAARHR
Sbjct: 106 SLQPYPS--EKKNSMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHR 163
Query: 180 REMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
RE ISERIRILQR+VPGGTKMDTASMLDEAIHYVKFLKKQV TLEQAGA+
Sbjct: 164 RERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGAN 213
>gi|147768917|emb|CAN66981.1| hypothetical protein VITISV_004454 [Vitis vinifera]
Length = 282
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/91 (91%), Positives = 88/91 (96%)
Query: 129 EKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIR 188
+KRNSMAAMREMIFRIAAMQP+HIDPES+KPPKRRNVKISKDPQSVAARHRRE ISE+IR
Sbjct: 66 QKRNSMAAMREMIFRIAAMQPVHIDPESVKPPKRRNVKISKDPQSVAARHRRERISEKIR 125
Query: 189 ILQRIVPGGTKMDTASMLDEAIHYVKFLKKQ 219
ILQR+VPGGTKMDTASMLDEAIHYV FLK Q
Sbjct: 126 ILQRLVPGGTKMDTASMLDEAIHYVXFLKTQ 156
>gi|356565592|ref|XP_003551023.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 299
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/108 (88%), Positives = 100/108 (92%), Gaps = 2/108 (1%)
Query: 123 PYPPTLEKRN--SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRR 180
PYP +K+N SMAAMREMIFRIA MQP+HIDPESIKPPKRRNVKISKDPQSVAARHRR
Sbjct: 108 PYPSEKKKKNNNSMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRR 167
Query: 181 EMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGA 228
E ISERIRILQR+VPGGTKMDTASMLDEAIHYVKFLKKQV TLEQAGA
Sbjct: 168 ERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGA 215
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 95/162 (58%), Positives = 112/162 (69%), Gaps = 11/162 (6%)
Query: 76 TFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVT------GGRLKTSLPSPSPYPPTLE 129
T + S F N T P P P+ P + G L + P+ P P +
Sbjct: 10 TLSQSDMSSTFFPNNTAPNCTPHVLPIIPPPAYFSDYSPPPGTSLFQTTPTIIPETPARQ 69
Query: 130 KRNS-----MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMIS 184
+R+ MAAMREMIFRIAAMQP+ IDPE+IK PKRRNV+ISKDPQSVAARHRRE IS
Sbjct: 70 RRSGVSGGGMAAMREMIFRIAAMQPVEIDPEAIKAPKRRNVRISKDPQSVAARHRRERIS 129
Query: 185 ERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
++IRILQR+VPGGTKMDTASMLDEA+HYVKFLK+QV TLEQ+
Sbjct: 130 QKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQS 171
>gi|356518097|ref|XP_003527719.1| PREDICTED: uncharacterized protein LOC100788158 [Glycine max]
gi|83853832|gb|ABC47864.1| bhelix-loop-helix transcription factor [Glycine max]
Length = 258
Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/139 (71%), Positives = 110/139 (79%), Gaps = 4/139 (2%)
Query: 129 EKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIR 188
EKRNSMAAMREMIFR+AAMQPIHIDPES+K PKRRNVKISKDPQSVAARHRRE ISERIR
Sbjct: 115 EKRNSMAAMREMIFRMAAMQPIHIDPESVKAPKRRNVKISKDPQSVAARHRRERISERIR 174
Query: 189 ILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAH----RPMGGVGFQGAPMAG 244
ILQR+VPGGTKMDTASMLDEAIHYVKFLK QV +LE+A + RP+ G G P+A
Sbjct: 175 ILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERASSANNNIRPLNAAGQIGFPVAS 234
Query: 245 VAYPSLVKASHQMVDNINM 263
Y L +Q + NM
Sbjct: 235 TPYFPLPSKPYQAPNMDNM 253
>gi|356509739|ref|XP_003523603.1| PREDICTED: transcription factor HEC1-like [Glycine max]
gi|83853819|gb|ABC47852.1| bHelix-loop-helix transcription factor [Glycine max]
Length = 264
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 153/241 (63%), Gaps = 33/241 (13%)
Query: 13 EDHMDMMAVIMQMEKLPEFCEAFNNNISPL-PHEIHFSNANTNSNISTQPIYHNPNNYVS 71
E MD+M +++Q +LP+ E + + + P E HF NT + + N N + S
Sbjct: 8 EYQMDVMTMMLQ--QLPQLSEPYTHTMEGFHPPEDHFYGNNT---MPLADLIDNNNPHSS 62
Query: 72 SPPPT---FTN-PSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPT 127
P + FT+ PSS++ N +QE H P+ + +PY
Sbjct: 63 MPWSSSYSFTHLPSSTISFSNNNPIMLQEQQQ---HSPSETYEDA-------NANPY--G 110
Query: 128 LEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERI 187
EKR+SMAAMREMIFR+AAMQPIHIDPES+K PKRRNVKISKDPQSVAARHRRE ISERI
Sbjct: 111 GEKRSSMAAMREMIFRMAAMQPIHIDPESVKQPKRRNVKISKDPQSVAARHRRERISERI 170
Query: 188 RILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAH----RPMG-------GVG 236
RILQR+VPGGTKMDTASMLDEAIHYVKFLK QV +L++A + RP+G G+G
Sbjct: 171 RILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLQRASSANNNIRPLGTSTVNATGIG 230
Query: 237 F 237
F
Sbjct: 231 F 231
>gi|449447251|ref|XP_004141382.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524104|ref|XP_004169063.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 238
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/113 (79%), Positives = 101/113 (89%), Gaps = 3/113 (2%)
Query: 127 TLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISER 186
+L+K+ S+AAMREMIFRIA MQPIHIDPE++KPPKRRNVKIS DPQSVAARHRRE ISER
Sbjct: 101 SLQKQRSVAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISER 160
Query: 187 IRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA---GAHRPMGGVG 236
IRILQR+VPGGTKMDTASMLDEAIHYVKFLK QV +LE+A +RP+ GVG
Sbjct: 161 IRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAVSAGNRPITGVG 213
>gi|297797671|ref|XP_002866720.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
gi|297312555|gb|EFH42979.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 134/222 (60%), Gaps = 52/222 (23%)
Query: 17 DMMAVIM-QMEKLPEFCEAFNNNISPLPHEIHFSNANTNSNISTQPIYHNPNNYVSSPPP 75
D+M ++M QMEKLPEFC NPN+ SP
Sbjct: 4 DIMNMMMHQMEKLPEFC--------------------------------NPNSSFFSPDH 31
Query: 76 TFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRL---KTSLPSPSPYPPTLEKR- 131
T+P LF +T + MT ++P G L + P+ + L+KR
Sbjct: 32 NNTHPF----LFNSTHYHSDQAMT---NEPGFRYGSGLLTNHSSIFPNTAYSSVLLDKRN 84
Query: 132 --------NSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMI 183
+MAAMREMIFRIA MQPIHIDPE++KPPKRRNV+ISKDPQSVAARHRRE I
Sbjct: 85 NTSNNNNSTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERI 144
Query: 184 SERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
SERIRILQR+VPGGTKMDTASMLDEAIHYVKFLKKQV +LE+
Sbjct: 145 SERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEE 186
>gi|51970182|dbj|BAD43783.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
Length = 231
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 117/172 (68%), Gaps = 19/172 (11%)
Query: 81 SSSLPLFINTT---TPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNS---- 133
S++ P F N T P + M P HQP G + + PSP P EKR
Sbjct: 40 SNTHPFFFNPTHSHLPFDQTM--PHHQP-----GLNFRYA---PSPSSPLPEKRGGCSDN 89
Query: 134 --MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQ 191
MAAMREMIFRIA MQPIHIDPES+KPPKR+NV+ISKDPQSVAARHRRE ISERIRILQ
Sbjct: 90 ANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQ 149
Query: 192 RIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMA 243
R+VPGGTKMDTASMLDEAIHYVKFLKKQV +LE+ G G +A
Sbjct: 150 RLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVVNGGGMTAVAGGALA 201
>gi|15229725|ref|NP_190602.1| transcription factor HEC2 [Arabidopsis thaliana]
gi|75313649|sp|Q9SND4.1|HEC2_ARATH RecName: Full=Transcription factor HEC2; AltName: Full=Basic
helix-loop-helix protein 37; Short=AtbHLH37; Short=bHLH
37; AltName: Full=Protein HECATE 2; AltName:
Full=Transcription factor EN 117; AltName: Full=bHLH
transcription factor bHLH037
gi|6523044|emb|CAB62312.1| putative protein [Arabidopsis thaliana]
gi|37202028|gb|AAQ89629.1| At3g50330 [Arabidopsis thaliana]
gi|51969500|dbj|BAD43442.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|51969966|dbj|BAD43675.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|332645132|gb|AEE78653.1| transcription factor HEC2 [Arabidopsis thaliana]
Length = 231
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 118/172 (68%), Gaps = 19/172 (11%)
Query: 81 SSSLPLFINTT---TPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNS---- 133
S++ P F N T P + M P HQP G + + PSPS P EKR
Sbjct: 40 SNTHPFFFNPTHSHLPFDQTM--PHHQP-----GLNFRYA-PSPSSSLP--EKRGGCSDN 89
Query: 134 --MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQ 191
MAAMREMIFRIA MQPIHIDPES+KPPKR+NV+ISKDPQSVAARHRRE ISERIRILQ
Sbjct: 90 ANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQ 149
Query: 192 RIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMA 243
R+VPGGTKMDTASMLDEAIHYVKFLKKQV +LE+ G G +A
Sbjct: 150 RLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVVNGGGMTAVAGGALA 201
>gi|15240189|ref|NP_201507.1| transcription factor HEC1 [Arabidopsis thaliana]
gi|75309085|sp|Q9FHA7.1|HEC1_ARATH RecName: Full=Transcription factor HEC1; AltName: Full=Basic
helix-loop-helix protein 88; Short=AtbHLH88; Short=bHLH
88; AltName: Full=Protein HECATE 1; AltName:
Full=Transcription factor EN 118; AltName: Full=bHLH
transcription factor bHLH088
gi|20127097|gb|AAM10961.1|AF488618_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|10177593|dbj|BAB10940.1| unnamed protein product [Arabidopsis thaliana]
gi|110737755|dbj|BAF00816.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332010913|gb|AED98296.1| transcription factor HEC1 [Arabidopsis thaliana]
Length = 241
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 134/222 (60%), Gaps = 52/222 (23%)
Query: 17 DMMAVIM-QMEKLPEFCEAFNNNISPLPHEIHFSNANTNSNISTQPIYHNPNNYVSSPPP 75
D+M ++M QMEKLPEFC NPN+ SP
Sbjct: 4 DIMNMMMHQMEKLPEFC--------------------------------NPNSSFFSPDH 31
Query: 76 TFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLK--TSLPSPSPYPPT-LEKRN 132
T P LF +T MT ++P G L +S+ + Y L+KRN
Sbjct: 32 NNTYPF----LFNSTHYQSDHSMT---NEPGFRYGSGLLTNPSSISPNTAYSSVFLDKRN 84
Query: 133 S---------MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMI 183
+ MAAMREMIFRIA MQPIHIDPE++KPPKRRNV+ISKDPQSVAARHRRE I
Sbjct: 85 NSNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERI 144
Query: 184 SERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
SERIRILQR+VPGGTKMDTASMLDEAIHYVKFLKKQV +LE+
Sbjct: 145 SERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEE 186
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 85/100 (85%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM++RIAAMQP+ IDP ++K P+RRNV+IS+DPQSVAARHRRE ISER+R+LQR+
Sbjct: 126 LGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISERVRVLQRL 185
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
VPGGTKMDTASMLDEAI Y+KFLK+QV L AG G
Sbjct: 186 VPGGTKMDTASMLDEAIRYIKFLKRQVQELHSAGGQSSHG 225
>gi|297819712|ref|XP_002877739.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
gi|297323577|gb|EFH53998.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/170 (60%), Positives = 115/170 (67%), Gaps = 15/170 (8%)
Query: 81 SSSLPLFIN-TTTPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNS------ 133
S++ P F + T T + T P HQP G PS S P +KR
Sbjct: 33 SNTHPFFFDPTHTHLPFDQTIPHHQP------GLSFRYAPSTSSSLP--DKRGGCSDNAN 84
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
MAAMREMIFRIA MQPIHIDPES+KPPKR+NV+ISKDPQSVAARHRRE ISERIRILQR+
Sbjct: 85 MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 144
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMA 243
VPGGTKMDTASMLDEAIHYVKFLKKQV +LE+ G G +A
Sbjct: 145 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVVNGGGMTAVAGGALA 194
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 82/91 (90%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM+++IAAMQP+ IDP +I+ PKRRNV+IS DPQSVAARHRRE ISE+IRILQR+
Sbjct: 110 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 169
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI YVKFLK+Q+ L+
Sbjct: 170 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 200
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 83/91 (91%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM++RIAAMQP+ IDP ++K P+RRNV+IS+DPQSVAARHRRE ISER+R+LQR+
Sbjct: 126 LGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISERVRVLQRL 185
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI Y+KFLK+QV L+
Sbjct: 186 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 216
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 83/91 (91%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM++RIAAMQP+ IDP ++K P+RRNV+IS+DPQSVAARHRRE ISER+R+LQR+
Sbjct: 125 LGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISERVRVLQRL 184
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI Y+KFLK+QV L+
Sbjct: 185 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 215
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 83/91 (91%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM+++IAAMQP+ IDP +I+ PKRRNV+IS+DPQSVAARHRRE ISE+IRILQR+
Sbjct: 87 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISEDPQSVAARHRRERISEKIRILQRL 146
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI YVKFLK+Q+ L+
Sbjct: 147 VPGGTKMDTASMLDEAIRYVKFLKRQIKLLQ 177
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 82/91 (90%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM+++IAAMQP+ IDP +I+ PKRRNV+IS DPQSVAARHRRE ISE+IRILQR+
Sbjct: 97 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 156
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI YVKFLK+Q+ L+
Sbjct: 157 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 187
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 82/91 (90%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM+++IAAMQP+ IDP +I+ PKRRNV+IS DPQSVAARHRRE ISE+IRILQR+
Sbjct: 102 LGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 161
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI YVKFLK+Q+ L+
Sbjct: 162 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 192
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 82/91 (90%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM+++IA MQP+ IDP +I+ PKR+NV+IS DPQSVAARHRRE ISE+IRILQR+
Sbjct: 98 LGAMKEMMYKIAVMQPVDIDPAAIRKPKRKNVRISDDPQSVAARHRRERISEKIRILQRL 157
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAIHYVKFLK+Q+ L+
Sbjct: 158 VPGGTKMDTASMLDEAIHYVKFLKRQIRLLQ 188
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 82/91 (90%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM+F+IAAMQP++IDP +I PKRRNV+IS DPQSVAARHRRE ISE+IRILQR+
Sbjct: 71 LGAMKEMMFKIAAMQPVNIDPATIYKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 130
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI YVKFLKKQ+ L+
Sbjct: 131 VPGGTKMDTASMLDEAIRYVKFLKKQIRLLQ 161
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 82/91 (90%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM++RIAAMQP+ IDP ++K P+RRNV+IS+DPQSV ARHRRE ISER+R+LQR+
Sbjct: 126 LGAMKEMMYRIAAMQPVDIDPATVKKPRRRNVRISEDPQSVVARHRRERISERVRVLQRL 185
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI Y+KFLK+QV L+
Sbjct: 186 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 216
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 81/90 (90%)
Query: 135 AAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIV 194
AM+EM+++IAAMQP+ IDP +I+ PKRRNV+IS DPQSVAARHRRE ISE+IRILQR+V
Sbjct: 62 GAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLV 121
Query: 195 PGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
PGGTKMDTASMLDEAI YVKFLK+Q+ L+
Sbjct: 122 PGGTKMDTASMLDEAIRYVKFLKRQIRQLQ 151
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 80/88 (90%)
Query: 137 MREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPG 196
M+EM+++IAAMQP+ IDP +I+ PKRRNV+IS DPQSVAARHRRE ISE+IRILQR+VPG
Sbjct: 1 MKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPG 60
Query: 197 GTKMDTASMLDEAIHYVKFLKKQVHTLE 224
GTKMDTASMLDEAI YVKFLK+Q+ L+
Sbjct: 61 GTKMDTASMLDEAIRYVKFLKRQIRQLQ 88
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 81/91 (89%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM+++IAAMQP+ IDP +I+ PKRRNV+IS DP SVAARHRRE ISE+IRILQR+
Sbjct: 66 LGAMKEMMYKIAAMQPVDIDPATIRRPKRRNVRISDDPASVAARHRRERISEKIRILQRL 125
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI YVKFLK+Q+ L+
Sbjct: 126 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 156
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 94/132 (71%), Gaps = 4/132 (3%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM++++A MQP+ IDP S++ PKRRNV+IS DPQSVAARHRRE ISE+IRILQR+
Sbjct: 82 LGAMKEMMYKMAVMQPVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 141
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYPSLVKA 253
VPGGTKMDTASMLDEAI YVKFLK+Q+ L+ + P+ + GA +P
Sbjct: 142 VPGGTKMDTASMLDEAILYVKFLKRQIRLLQSTSS--PL--INCTGAAPNSDYWPFAPNI 197
Query: 254 SHQMVDNINMQM 265
H + N N M
Sbjct: 198 FHSSITNTNASM 209
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 81/91 (89%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM++++A MQP+ IDP S++ PKRRNV+IS DPQSVAARHRRE ISE+IRILQR+
Sbjct: 91 LGAMKEMMYKMAVMQPVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRL 150
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI YVKFLK+Q+ L+
Sbjct: 151 VPGGTKMDTASMLDEAIRYVKFLKRQIRFLQ 181
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 80/90 (88%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM+++IAAMQP+ IDP +I+ PKRRNV+IS DPQS+AAR RRE ISE+IRILQR+
Sbjct: 82 LGAMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRERISEKIRILQRL 141
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
VPGGTKMDTASMLDEAI YVKFLK+Q+ L
Sbjct: 142 VPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 80/91 (87%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM++RIAAMQP+ IDP +I+ PKRRNV+IS DPQSVAAR RRE ISE+IRILQR+
Sbjct: 77 LGAMKEMMYRIAAMQPVEIDPATIRKPKRRNVRISDDPQSVAARLRRERISEKIRILQRL 136
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGG KMDTASML+EAI YVKFLK+Q+ L+
Sbjct: 137 VPGGRKMDTASMLEEAIRYVKFLKRQIRLLQ 167
>gi|42408644|dbj|BAD09865.1| bHLH protein family-like [Oryza sativa Japonica Group]
gi|125561863|gb|EAZ07311.1| hypothetical protein OsI_29558 [Oryza sativa Indica Group]
gi|125603724|gb|EAZ43049.1| hypothetical protein OsJ_27638 [Oryza sativa Japonica Group]
Length = 246
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/240 (42%), Positives = 135/240 (56%), Gaps = 34/240 (14%)
Query: 1 MDVDMIKASQQAEDHMDMMAVIMQMEKLPEF---------CEAFNNNISPLPHEIHFSNA 51
M+ DM+ ++ +A+ +++M ++Q+E+L F C + + HFS+
Sbjct: 1 MEFDMLNSNPEAQ--LELMNTMLQLEQLSAFPDHHGMVVPCSPTSPCMGAQGGHHHFSSV 58
Query: 52 NTNSNISTQPIYHNPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTG 111
N H P + V S T + P +N G
Sbjct: 59 N-----------HQPAHGVVSSGGANTGDGYRDQYYTQLL---------PAAAYSNAAGG 98
Query: 112 GRLKTSLPSPSPYPPTLEKRNSM---AAMREMIFRIAAMQPIHIDPESIKPPKRRNVKIS 168
GR + + P + + AAMREMIF IAA+QP++IDPE+++PPKRRNV+IS
Sbjct: 99 GRGSEYHTTTTTRPASGGGGDGGVGPAAMREMIFHIAALQPVNIDPETVRPPKRRNVRIS 158
Query: 169 KDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGA 228
DPQSVAAR RRE ISERIRILQR+VPGGTKMDTASMLDEAIHYVKFLK QV +LE+A A
Sbjct: 159 TDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 218
>gi|357141633|ref|XP_003572294.1| PREDICTED: uncharacterized protein LOC100835736 [Brachypodium
distachyon]
Length = 252
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/115 (72%), Positives = 94/115 (81%), Gaps = 10/115 (8%)
Query: 135 AAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIV 194
AAMREMIFRIAA+QP++IDPE+++PPKRRNV+IS DPQSVAAR RRE ISERIRILQR+V
Sbjct: 133 AAMREMIFRIAALQPVNIDPETVRPPKRRNVRISTDPQSVAARVRRERISERIRILQRLV 192
Query: 195 PGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ-------AGAHRPM---GGVGFQG 239
PGGTKMDTASMLDEAIHYVKFLK QV +LE+ G HRP G +QG
Sbjct: 193 PGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAANNNNGNHRPSPAGSGAAYQG 247
>gi|413921862|gb|AFW61794.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/238 (43%), Positives = 136/238 (57%), Gaps = 28/238 (11%)
Query: 1 MDVDMIKASQQAEDHMDMMAVIMQMEKLPEFCEAFNNNISPLPHEIHFSNANTNSNISTQ 60
MD DM+ + +A+ +++M ++Q+E+L F PLP +
Sbjct: 1 MDFDMLNSHPEAQ--LELMKAMLQLEQLTAF---------PLPDHGAMMMVPSTPPSPGM 49
Query: 61 PIYHNPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPP----------LHQPNNVVT 110
P ++Y SS P + ++ ++ + Q P H V
Sbjct: 50 PQATTHHHYFSSVPHHMSAGANGRGVYDDDHQYSQGTAAPCNGSARSSEYVAHAQGPVAG 109
Query: 111 GGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKD 170
GG S + S +S +AMREMIFR+AA+QP++IDPE ++PPKRRNV+IS D
Sbjct: 110 GGNSGESTAATS-------VGSSSSAMREMIFRVAALQPVNIDPEMVRPPKRRNVRISTD 162
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGA 228
PQSVAAR RRE ISERIRILQR+VPGGTKMDTASMLDEAIHYVKFLK QV +LE+A A
Sbjct: 163 PQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 220
>gi|242044912|ref|XP_002460327.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
gi|241923704|gb|EER96848.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
Length = 261
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/250 (43%), Positives = 139/250 (55%), Gaps = 47/250 (18%)
Query: 1 MDVDMIKASQQAEDHMDMMAVIMQMEKLPEFCEAFNNNISPLPHEIHFSNANTNSNISTQ 60
M+ D++ S +A+ +++M ++Q+E+L ++ ++P+ I S + T
Sbjct: 1 MEFDLLNYSPEAQ--LELMNTMLQLEQLTALDAHQSSPMAPVSPPI--------SPVQTH 50
Query: 61 PIYHNPNNYVSSPPPTFTNPSSSLPLFINTTT---PVQEPMTPPLHQPNNVVTGGRLK-- 115
+HN S PPP + I TTT P ++ TPP TGG L
Sbjct: 51 AGHHN---SFSPPPPHMST--------ITTTTAGYPAEQYHTPPAAALYAAATGGSLDHL 99
Query: 116 --TSLPSPSPYPPTLEKR-------------------NSMAAMREMIFRIAAMQPIHIDP 154
+ S SP P S AMRE IF IAA+QP+ IDP
Sbjct: 100 QDCYVLSSSPGPDNNNNNNGGAAAAAALQQAMGSSSPTSADAMREAIFHIAALQPVEIDP 159
Query: 155 ESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVK 214
E+++PPKRRNV+ISKDPQSVAAR RRE ISERIR LQR+VPGGTKMDTASMLDEAIHYVK
Sbjct: 160 EAVRPPKRRNVRISKDPQSVAARLRRERISERIRTLQRLVPGGTKMDTASMLDEAIHYVK 219
Query: 215 FLKKQVHTLE 224
FLK QV +LE
Sbjct: 220 FLKSQVQSLE 229
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 80/93 (86%)
Query: 132 NSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQ 191
+ AM+EM++R+AAMQP+ IDP +I PKR+NV+IS DPQSVAAR RRE ISE+IRILQ
Sbjct: 5 EELGAMKEMMYRVAAMQPVDIDPATIHKPKRKNVRISDDPQSVAARLRRERISEKIRILQ 64
Query: 192 RIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
R+VPGG KMDTASMLDEAI YVKFLK+Q+ +L+
Sbjct: 65 RLVPGGRKMDTASMLDEAIRYVKFLKRQIRSLQ 97
>gi|242081721|ref|XP_002445629.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
gi|241941979|gb|EES15124.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
Length = 269
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/94 (80%), Positives = 87/94 (92%)
Query: 135 AAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIV 194
+AMREMIFR+AA+QP++IDPE ++PPKRRNV+IS DPQSVAAR RRE ISERIRILQR+V
Sbjct: 146 SAMREMIFRVAALQPVNIDPEMVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLV 205
Query: 195 PGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGA 228
PGGTKMDTASMLDEAIHYVKFLK QV +LE+A A
Sbjct: 206 PGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAA 239
>gi|115479527|ref|NP_001063357.1| Os09g0455300 [Oryza sativa Japonica Group]
gi|51535231|dbj|BAD38280.1| basic helix-loop-helix (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|51536285|dbj|BAD38453.1| basic helix-loop-helix (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|113631590|dbj|BAF25271.1| Os09g0455300 [Oryza sativa Japonica Group]
gi|125563981|gb|EAZ09361.1| hypothetical protein OsI_31634 [Oryza sativa Indica Group]
gi|215697773|dbj|BAG91966.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765762|dbj|BAG87459.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 236
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/89 (84%), Positives = 83/89 (93%)
Query: 136 AMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVP 195
AMREMIF IAA+QP+ IDPE+++PPKRRNV+ISKDPQSVAAR RRE ISERIRILQR+VP
Sbjct: 116 AMREMIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRILQRLVP 175
Query: 196 GGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
GGTKMDTASMLDEAIHYVKFLK QV +LE
Sbjct: 176 GGTKMDTASMLDEAIHYVKFLKSQVQSLE 204
>gi|326530726|dbj|BAK01161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 238
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/89 (82%), Positives = 82/89 (92%)
Query: 136 AMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVP 195
AMREMIF IAA+QP+ IDPE+++PPKRRNV+ SKDPQSVAAR RRE ISERIR+LQR+VP
Sbjct: 124 AMREMIFHIAALQPVDIDPEAVRPPKRRNVRTSKDPQSVAARLRRERISERIRVLQRLVP 183
Query: 196 GGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
GGTKMDTASMLDEAIHYVKFLK QV +LE
Sbjct: 184 GGTKMDTASMLDEAIHYVKFLKSQVQSLE 212
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 91/124 (73%), Gaps = 10/124 (8%)
Query: 111 GGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESI-------KPPKRR 163
GG + + + + Y P +E +MA ++EMI+R AAM+P+++ PE++ + P+R+
Sbjct: 231 GGHVPSCGAAAAGYEPDME---AMAQVKEMIYRAAAMRPVNLGPEAVGAAGAGAERPRRK 287
Query: 164 NVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
NV+IS DPQ+VAAR RRE +SER+R+LQ++VPGG+KMDTASMLDEA Y+KFLK QV L
Sbjct: 288 NVRISSDPQTVAARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 347
Query: 224 EQAG 227
E G
Sbjct: 348 ETLG 351
>gi|226497552|ref|NP_001147658.1| LOC100281267 [Zea mays]
gi|195612888|gb|ACG28274.1| DNA binding protein [Zea mays]
gi|414885734|tpg|DAA61748.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/94 (78%), Positives = 83/94 (88%)
Query: 132 NSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQ 191
S AMRE IF IAA+QP+ IDPE+++PPKRRNV+ISKDPQSVAAR RRE ISERIR LQ
Sbjct: 120 TSADAMREAIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRTLQ 179
Query: 192 RIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
R+VPGGTKMDTASMLDEAIHYVKFLK QV +LE+
Sbjct: 180 RLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLER 213
>gi|255644404|gb|ACU22707.1| unknown [Glycine max]
Length = 185
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/78 (84%), Positives = 71/78 (91%), Gaps = 2/78 (2%)
Query: 123 PYPPTLEKRN--SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRR 180
PYP +K+N SMAAMREMIFRIA MQP+HIDPESIKPPKRRNVKISKDPQSVAARHRR
Sbjct: 108 PYPSEKKKKNNNSMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRR 167
Query: 181 EMISERIRILQRIVPGGT 198
E ISERI+ILQR+VPGGT
Sbjct: 168 ERISERIKILQRLVPGGT 185
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 8/122 (6%)
Query: 111 GGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESI-----KPPKRRNV 165
GG + + Y P +E +MA ++EMI+R AAM+P+++ PE I + P+R+NV
Sbjct: 234 GGGAHVARDPSAGYEPDME---AMAQVKEMIYRAAAMRPVNLGPEVIAAAAAEKPRRKNV 290
Query: 166 KISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
+IS DPQ+VAAR RRE +SER+R+LQ++VPGG+KMDTASMLDEA Y+KFLK QV LE
Sbjct: 291 RISSDPQTVAARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALET 350
Query: 226 AG 227
G
Sbjct: 351 LG 352
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 81/97 (83%), Gaps = 2/97 (2%)
Query: 132 NSMAAMREMIFRIAAMQPI-HIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRIL 190
+ A+MR ++FR A+ QP+ ++ + PKRRNV+ISKDPQSVAARHRRE IS+RIR+L
Sbjct: 403 DEFASMRAILFRHAS-QPVPSLEEIASSRPKRRNVRISKDPQSVAARHRRERISDRIRVL 461
Query: 191 QRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
QR+VPGGTKMDTASMLDEAIHYVKFLK Q+ TLEQ G
Sbjct: 462 QRLVPGGTKMDTASMLDEAIHYVKFLKLQLQTLEQIG 498
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 78/95 (82%)
Query: 133 SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
++A M+EMI+R AA +P++ E ++ KR+NVKIS DPQ+VAARHRRE ISE+IR+LQ+
Sbjct: 304 AIAQMKEMIYRAAAFRPVNFGLEVVEKLKRKNVKISTDPQTVAARHRRERISEKIRVLQK 363
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
+VPGG+KMDTASMLDEA +Y+KFL+ QV LE G
Sbjct: 364 LVPGGSKMDTASMLDEAANYLKFLRSQVKALESLG 398
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 78/95 (82%)
Query: 133 SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
++A M+EMI+R AA +P++ E + PKR+NVKIS DPQ+VAARHRRE I+E+IR+LQ+
Sbjct: 306 AIAQMKEMIYRAAAFRPVNFGLEVAEKPKRKNVKISTDPQTVAARHRRERINEKIRVLQK 365
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
+VPGG+KMDTASMLDEA +Y+KFL+ QV LE G
Sbjct: 366 LVPGGSKMDTASMLDEAANYLKFLRSQVKALESLG 400
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 89/126 (70%), Gaps = 11/126 (8%)
Query: 103 HQPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESI-KPPK 161
HQP++ G + + Y P +E +MA ++EMI+R AAM+P+H+ E+ P+
Sbjct: 227 HQPHHHHAG-------ATTAGYEPDME---AMAQVKEMIYRAAAMRPVHLGTEAAADKPR 276
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R+NV+IS DPQ+VAAR RRE +S+R+R+LQ++VPGG KMDTASMLDEA Y+KFLK QV
Sbjct: 277 RKNVRISSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQ 336
Query: 222 TLEQAG 227
LE G
Sbjct: 337 KLETLG 342
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 89/126 (70%), Gaps = 11/126 (8%)
Query: 103 HQPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESI-KPPK 161
HQP++ G + + Y P +E +MA ++EMI+R AAM+P+H+ E+ P+
Sbjct: 226 HQPHHHHAG-------ATTAGYEPDME---AMAQVKEMIYRAAAMRPVHLGTEAAADKPR 275
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R+NV+IS DPQ+VAAR RRE +S+R+R+LQ++VPGG KMDTASMLDEA Y+KFLK QV
Sbjct: 276 RKNVRISSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQ 335
Query: 222 TLEQAG 227
LE G
Sbjct: 336 KLETLG 341
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 85/119 (71%)
Query: 133 SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
++A M+EMI+R AA +P++ E ++ PKR+NVKIS DPQ+VAAR RRE ISE+IR+LQ
Sbjct: 243 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 302
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYPSLV 251
+VPGGTKMDTASMLDEA +Y+KFL+ QV LE + F AP + +PS +
Sbjct: 303 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPSFPLFHPSFL 361
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/103 (64%), Positives = 78/103 (75%), Gaps = 4/103 (3%)
Query: 134 MAAMREMIFRIAAMQPI-HIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
MA MRE ++R+A +PI D PKRRNV+IS DPQ+VAARHRRE IS +IRILQR
Sbjct: 255 MANMRETLYRMAVWRPITATDCLGGSKPKRRNVRISSDPQTVAARHRRERISTKIRILQR 314
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHT---LEQAGAHRPM 232
+VPGGTKMDTASMLDEAIHYVK+LK QV LEQ+ +P+
Sbjct: 315 LVPGGTKMDTASMLDEAIHYVKYLKSQVQAMEMLEQSSGDQPL 357
>gi|297810171|ref|XP_002872969.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
gi|297318806|gb|EFH49228.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
Length = 197
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 81/112 (72%), Gaps = 9/112 (8%)
Query: 136 AMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVP 195
AM+EM + IA MQP+ IDP ++ P RRNVKIS DPQ+V AR RRE ISE+IRIL+RIVP
Sbjct: 86 AMKEMQYMIAVMQPVDIDPATVPKPNRRNVKISDDPQTVVARRRRERISEKIRILKRIVP 145
Query: 196 GGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAY 247
GG KMDTASMLDEAI Y KFLK+QV L+ P + GAPMA +Y
Sbjct: 146 GGAKMDTASMLDEAIRYTKFLKRQVRILQ------PHSQI---GAPMADPSY 188
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 96/152 (63%), Gaps = 10/152 (6%)
Query: 80 PSSSLPLFINTTTPVQEPMT---PPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAA 136
P+ P I T P+ T P ++ G + S + Y P +E +MA
Sbjct: 190 PADDCPATIATAPPLPRAGTKRKAPATTATSITFGLQDTNSAGAAGGYEPDME---AMAQ 246
Query: 137 MREMIFRIAAMQPIHIDPES----IKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
++EMI+R AAM+P+ + ES I P+R+NV+IS DPQ+VAAR RRE +S+R+R+LQ+
Sbjct: 247 VKEMIYRAAAMRPVSLVTESPAAGISKPRRKNVRISSDPQTVAARLRRERVSDRLRVLQK 306
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+VPGG+KMDTASMLDEA Y+KFLK QV LE
Sbjct: 307 LVPGGSKMDTASMLDEAASYLKFLKSQVQALE 338
>gi|414869866|tpg|DAA48423.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 81/88 (92%)
Query: 137 MREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPG 196
MREM+FR+AA+QP++I+PE ++PPKRRN +IS DPQSVAAR RRE ISERIR+LQR+VPG
Sbjct: 135 MREMVFRVAALQPVNIEPEMVRPPKRRNARISTDPQSVAARVRRERISERIRVLQRLVPG 194
Query: 197 GTKMDTASMLDEAIHYVKFLKKQVHTLE 224
GTKMDTASMLDEAIHYVKFLK QV +LE
Sbjct: 195 GTKMDTASMLDEAIHYVKFLKTQVQSLE 222
>gi|15236714|ref|NP_191923.1| transcription factor IND [Arabidopsis thaliana]
gi|209572742|sp|O81313.3|IND_ARATH RecName: Full=Transcription factor IND; AltName: Full=Basic
helix-loop-helix protein 40; Short=AtbHLH40; Short=bHLH
40; AltName: Full=Protein INDEHISCENT; AltName:
Full=Transcription factor EN 120; AltName: Full=bHLH
transcription factor bHLH040
gi|3193315|gb|AAC19297.1| contains similarity to transcriptional activator Ra [Arabidopsis
thaliana]
gi|7267099|emb|CAB80770.1| hypothetical protein [Arabidopsis thaliana]
gi|117958473|gb|ABK59672.1| At4g00120 [Arabidopsis thaliana]
gi|332656425|gb|AEE81825.1| transcription factor IND [Arabidopsis thaliana]
Length = 198
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 81/112 (72%), Gaps = 9/112 (8%)
Query: 136 AMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVP 195
AM+EM + IA MQP+ IDP ++ P RRNV+IS DPQ+V AR RRE ISE+IRIL+RIVP
Sbjct: 87 AMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVP 146
Query: 196 GGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAY 247
GG KMDTASMLDEAI Y KFLK+QV L+ P + GAPMA +Y
Sbjct: 147 GGAKMDTASMLDEAIRYTKFLKRQVRILQ------PHSQI---GAPMANPSY 189
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 81/111 (72%)
Query: 133 SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
++A M+EMI+R AA +P++ E ++ PKR+NVKIS DPQ+VAAR RRE ISE+IR+LQ
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMA 243
+VPGGTKMDTASMLDEA +Y+KFL+ QV LE + F AP +
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTS 351
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 81/111 (72%)
Query: 133 SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
++A M+EMI+R AA +P++ E ++ PKR+NVKIS DPQ+VAAR RRE ISE+IR+LQ
Sbjct: 270 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 329
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMA 243
+VPGGTKMDTASMLDEA +Y+KFL+ QV LE + F AP +
Sbjct: 330 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTS 380
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 91/146 (62%), Gaps = 15/146 (10%)
Query: 83 SLPLFINTTTP-VQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMI 141
++ F T P P TPP Q V G P ++ N A M+ ++
Sbjct: 298 TVTCFDRVTIPSATHPPTPPFRQRKGSVGG-------------SPAVDLDN-FARMQAIL 343
Query: 142 FRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMD 201
FR A+ ++ + PKRRNV+IS D QSVAARHRRE IS+RIR+LQR+VPGGTKMD
Sbjct: 344 FRQASQLIPTLEDIASSRPKRRNVRISIDTQSVAARHRRERISDRIRVLQRLVPGGTKMD 403
Query: 202 TASMLDEAIHYVKFLKKQVHTLEQAG 227
TASMLDEAIHY+KFLK+Q+ TLEQ G
Sbjct: 404 TASMLDEAIHYIKFLKQQLQTLEQLG 429
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 80/111 (72%)
Query: 133 SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
++A M+EMI+R AA +P++ E ++ PKR+NVKIS DPQ+VAAR RRE ISE+IR+LQ
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMA 243
+VPGGTKMDTASMLDEA +Y KFL+ QV LE + F AP +
Sbjct: 301 LVPGGTKMDTASMLDEAANYFKFLRAQVKALENLRPKLDQTNLSFSSAPTS 351
>gi|242080237|ref|XP_002444887.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
gi|241941237|gb|EES14382.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
Length = 348
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 83/91 (91%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM++RIAAMQP+ IDP +IK P+RRNV+IS+DPQSVAARHRRE ISERIRILQR+
Sbjct: 166 LGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERIRILQRL 225
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI Y+KFLK+QV L+
Sbjct: 226 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 256
>gi|242080239|ref|XP_002444888.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
gi|241941238|gb|EES14383.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
Length = 331
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 83/91 (91%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM++RIAAMQP+ IDP +IK P+RRNV+IS+DPQSVAARHRRE ISERIRILQR+
Sbjct: 149 LGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERIRILQRL 208
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI Y+KFLK+QV L+
Sbjct: 209 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 239
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 77/103 (74%), Gaps = 4/103 (3%)
Query: 134 MAAMREMIFRIAAMQPI-HIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
M MRE ++R+A +PI D PKRRNV+IS DPQ+VAARHRRE IS +IRILQR
Sbjct: 256 MENMRETLYRMAVWRPITATDCLGGSKPKRRNVRISSDPQTVAARHRRERISTKIRILQR 315
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHT---LEQAGAHRPM 232
+VPGGTKMDTASMLDEAIHYVK+LK QV LEQ+ +P+
Sbjct: 316 LVPGGTKMDTASMLDEAIHYVKYLKSQVQAMEMLEQSSGDQPL 358
>gi|342298424|emb|CBY05402.1| INDEHISCENT-like protein [Lepidium appelianum]
Length = 172
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 86/125 (68%), Gaps = 7/125 (5%)
Query: 100 PPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKP 159
P LH P++++ P+P E+ M AM+EM + IAAMQP+ IDP ++
Sbjct: 31 PFLHDPHHLILD-------PTPETLIHLEEEDEDMDAMKEMQYMIAAMQPVDIDPATVPK 83
Query: 160 PKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQ 219
P RRNV+IS DPQ+ AR RRE ISE+IRIL+RIVPGG KMD+ASMLDEAI Y KFLK+Q
Sbjct: 84 PYRRNVRISDDPQTGVARRRRERISEKIRILKRIVPGGAKMDSASMLDEAIRYTKFLKRQ 143
Query: 220 VHTLE 224
V L+
Sbjct: 144 VRMLQ 148
>gi|293333080|ref|NP_001168866.1| uncharacterized protein LOC100382671 [Zea mays]
gi|223973413|gb|ACN30894.1| unknown [Zea mays]
Length = 335
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 82/90 (91%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM++RIAAMQP+ IDP +IK P+RRNV+IS+DPQSVAARHRRE ISERIRILQR+
Sbjct: 151 LGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISEDPQSVAARHRRERISERIRILQRL 210
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
VPGGTKMDTASMLDEAI Y+KFLK+QV L
Sbjct: 211 VPGGTKMDTASMLDEAIRYIKFLKRQVQEL 240
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 77/95 (81%)
Query: 133 SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
++A M+EMI+R AA +P+++ E + PKR+NV+IS DPQ+VAAR RRE IS+RIR+LQ
Sbjct: 170 AIAQMKEMIYRAAAFRPVNLGLEVAEKPKRKNVRISTDPQTVAARQRRERISDRIRVLQG 229
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
+VPGG+KMDTASMLDEA +Y+KFL+ QV LE G
Sbjct: 230 MVPGGSKMDTASMLDEAANYLKFLRSQVKALENLG 264
>gi|297725985|ref|NP_001175356.1| Os08g0108500 [Oryza sativa Japonica Group]
gi|255678100|dbj|BAH94084.1| Os08g0108500 [Oryza sativa Japonica Group]
Length = 306
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 82/92 (89%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM++RIAAMQP+ IDP +IK P+RRNV+IS DPQSVAARHRRE ISERIRILQR+
Sbjct: 130 LGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISDDPQSVAARHRRERISERIRILQRL 189
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
VPGGTKMDTASMLDEAI Y+KFLK+QV L+
Sbjct: 190 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQH 221
>gi|125601936|gb|EAZ41261.1| hypothetical protein OsJ_25770 [Oryza sativa Japonica Group]
Length = 303
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 82/91 (90%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM++RIAAMQP+ IDP +IK P+RRNV+IS DPQSVAARHRRE ISERIRILQR+
Sbjct: 127 LGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISDDPQSVAARHRRERISERIRILQRL 186
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI Y+KFLK+QV L+
Sbjct: 187 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 217
>gi|125559887|gb|EAZ05335.1| hypothetical protein OsI_27539 [Oryza sativa Indica Group]
Length = 303
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 82/91 (90%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM++RIAAMQP+ IDP +IK P+RRNV+IS DPQSVAARHRRE ISERIRILQR+
Sbjct: 127 LGAMKEMMYRIAAMQPVDIDPATIKKPRRRNVRISDDPQSVAARHRRERISERIRILQRL 186
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGGTKMDTASMLDEAI Y+KFLK+QV L+
Sbjct: 187 VPGGTKMDTASMLDEAIRYIKFLKRQVQELQ 217
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 12/112 (10%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIHI---------DPESIKPPKRRNVKISKDPQSV 174
Y P E ++A ++EMI+R AAM+P+H P S P+R+NV+IS DPQ+V
Sbjct: 241 YEPDSE---ALAQVKEMIYRAAAMRPVHQLVCGAGTEPAPSSQSKPRRKNVRISSDPQTV 297
Query: 175 AARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
AAR RRE +SER+R+LQR+VPGG++MDTASMLDEA Y+KFLK QV LE+A
Sbjct: 298 AARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAASYLKFLKTQVKALERA 349
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 77/97 (79%), Gaps = 2/97 (2%)
Query: 133 SMAAMREMIFRIAAMQPIHID--PESIKPPKRRNVKISKDPQSVAARHRREMISERIRIL 190
++A M+EMI+R AA +P+ + E + PKR+NVKIS DPQ+VAAR RRE IS+RIR+L
Sbjct: 355 AIAQMKEMIYRAAAFRPVSLLGLEEVAEKPKRKNVKISSDPQTVAARQRRERISDRIRVL 414
Query: 191 QRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
Q+IVPGG+KMDTASMLDEA +Y+KFL+ QV LE G
Sbjct: 415 QKIVPGGSKMDTASMLDEAANYLKFLRSQVKALESLG 451
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 85/115 (73%), Gaps = 9/115 (7%)
Query: 111 GGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESI-KPPKRRNVKISK 169
GG ++ S+ Y P E ++A ++EMI+R AAM+P+ + E + P+RRNV+IS
Sbjct: 304 GGGVEDSM-----YEPDTE---ALAQVKEMIYRAAAMRPVSLGSEDAGERPRRRNVRISS 355
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
DPQ+VAAR RRE ISER+R+LQ++VPGG KMDTASMLDEA +Y++FLK QV L+
Sbjct: 356 DPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQVRELQ 410
>gi|15242494|ref|NP_196537.1| transcription factor HEC3 [Arabidopsis thaliana]
gi|75311668|sp|Q9LXD8.1|HEC3_ARATH RecName: Full=Transcription factor HEC3; AltName: Full=Basic
helix-loop-helix protein 43; Short=AtbHLH43; Short=bHLH
43; AltName: Full=Protein HECATE 3; AltName:
Full=Transcription factor EN 119; AltName: Full=bHLH
transcription factor bHLH043
gi|7671414|emb|CAB89355.1| putative protein [Arabidopsis thaliana]
gi|9759006|dbj|BAB09533.1| unnamed protein product [Arabidopsis thaliana]
gi|332004059|gb|AED91442.1| transcription factor HEC3 [Arabidopsis thaliana]
Length = 224
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 82/98 (83%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM+++IAAMQ + IDP ++K PKRRNV+IS DPQSVAARHRRE ISERIRILQR+
Sbjct: 92 LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRP 231
VPGGTKMDTASMLDEAI YVKFLK+Q+ L + P
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTP 189
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 79/102 (77%), Gaps = 4/102 (3%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESI-KPPKRRNVKISKDPQSVAARHRREM 182
Y P E ++A ++EMI+R AAM+P+ + E + P+RRNV+IS DPQ+VAAR RRE
Sbjct: 341 YEPDTE---ALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRER 397
Query: 183 ISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
ISER+R+LQ++VPGG KMDTASMLDEA +Y++FLK Q+ L+
Sbjct: 398 ISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQ 439
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 82/113 (72%), Gaps = 13/113 (11%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIH--------IDP--ESIKPPKRRNVKISKDPQS 173
Y P E ++A ++EMI+R AAM+P+H +P S P+RRNV+IS DPQ+
Sbjct: 235 YEPDSE---AIAQVKEMIYRAAAMRPVHQLVCGAAGGEPPSSSQNKPRRRNVRISSDPQT 291
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
VAAR RRE +SER+R+LQR+VPGG++MDTASMLDEA Y+KFLK QV LE+A
Sbjct: 292 VAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKALERA 344
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 82/113 (72%), Gaps = 13/113 (11%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIH--------IDP--ESIKPPKRRNVKISKDPQS 173
Y P E ++A ++EMI+R AAM+P+H +P S P+RRNV+IS DPQ+
Sbjct: 236 YEPDSE---AIAQVKEMIYRAAAMRPVHQLVCGAAGGEPPSSSQNKPRRRNVRISSDPQT 292
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
VAAR RRE +SER+R+LQR+VPGG++MDTASMLDEA Y+KFLK QV LE+A
Sbjct: 293 VAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKALERA 345
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 79/102 (77%), Gaps = 4/102 (3%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESI-KPPKRRNVKISKDPQSVAARHRREM 182
Y P E ++A ++EMI+R AAM+P+ + E + P+RRNV+IS DPQ+VAAR RRE
Sbjct: 325 YEPDTE---ALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRER 381
Query: 183 ISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
ISER+R+LQ++VPGG KMDTASMLDEA +Y++FLK Q+ L+
Sbjct: 382 ISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQ 423
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 79/102 (77%), Gaps = 4/102 (3%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESI-KPPKRRNVKISKDPQSVAARHRREM 182
Y P E ++A ++EMI+R AAM+P+ + E + P+RRNV+IS DPQ+VAAR RRE
Sbjct: 329 YEPDTE---ALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRER 385
Query: 183 ISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
ISER+R+LQ++VPGG KMDTASMLDEA +Y++FLK Q+ L+
Sbjct: 386 ISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQ 427
>gi|237692500|gb|ACR15952.1| INDEHISCENT [Lepidium campestre]
gi|342298436|emb|CBY05408.1| INDEHISCENT-like protein [Lepidium campestre]
Length = 176
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 71/87 (81%)
Query: 138 REMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGG 197
+EM + IAAMQP+ IDP ++ P RRNV+IS DPQ+V AR RRE ISE+IRIL+RIVPGG
Sbjct: 66 KEMQYMIAAMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVPGG 125
Query: 198 TKMDTASMLDEAIHYVKFLKKQVHTLE 224
KMDTASMLDEAI Y KFLK+QV L+
Sbjct: 126 AKMDTASMLDEAIRYTKFLKRQVRILQ 152
>gi|414881477|tpg|DAA58608.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 481
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 80/107 (74%), Gaps = 9/107 (8%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIHIDPE------SIKPPKRRNVKISKDPQSVAAR 177
Y P E ++A ++EMI+R AAM+P+ + E + +PP+RRNV+IS DPQ+VAAR
Sbjct: 326 YEPDTE---ALAQVKEMIYRAAAMRPVSLGSEDDAGAGAERPPRRRNVRISSDPQTVAAR 382
Query: 178 HRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
RRE IS+R+R+LQ++VPGG KMDTASMLDEA Y++FLK QV L+
Sbjct: 383 QRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVRDLQ 429
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 120/220 (54%), Gaps = 36/220 (16%)
Query: 46 IHFSNANTNSNISTQPIYHNPNNYVSSPPPTFTNPSSSLPLFINTTTP-------VQEPM 98
+ S+ ++N+N S H+ NN V+SP T +P+S LP TT P V P
Sbjct: 141 CNISSGDSNNNYSGTG--HD-NNEVASPTSTILSPTSLLP-NSKTTCPKRKLPDVVGYPA 196
Query: 99 TPPLHQPNNVVT---GGRLKTSLPSPSP--------------YPPTLEKRNSMAAMREMI 141
T L P GG + +L + + Y P +E +MA ++EMI
Sbjct: 197 TTLLTPPQPQPLPRPGGAKRRALTTTTSISFGHHDMTNAAGGYEPDVE---AMAQVKEMI 253
Query: 142 FRIAAMQPIHI-----DPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPG 196
+R AAM+P+ + + P+R+NV+IS DPQ+VAAR RRE +S+R+R+LQ++VPG
Sbjct: 254 YRAAAMRPVSLVTAEAGAAASAKPRRKNVRISSDPQTVAARLRRERVSDRLRVLQKLVPG 313
Query: 197 GTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVG 236
G+KMDTASMLDEA Y+KFL+ QV LE G G
Sbjct: 314 GSKMDTASMLDEAASYLKFLRSQVQALETGNGSMATAGTG 353
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 79/102 (77%), Gaps = 4/102 (3%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESI-KPPKRRNVKISKDPQSVAARHRREM 182
Y P E ++A ++EMI+R AAM+P+ + E + P+RRNV+IS DPQ+VAAR RRE
Sbjct: 329 YEPDTE---AIAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVAARQRRER 385
Query: 183 ISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
ISER+R+LQ++VPGG KMDTASMLDEA +Y++FLK Q+ L+
Sbjct: 386 ISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQ 427
>gi|297811073|ref|XP_002873420.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
gi|297319257|gb|EFH49679.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/89 (76%), Positives = 79/89 (88%)
Query: 135 AAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIV 194
AM+EM+++IAAMQ + IDP ++K PKRRNV+IS DPQSVAARHRRE ISERIRILQR+V
Sbjct: 86 GAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLV 145
Query: 195 PGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
PGGTKMDTASMLDEAI YVKFLK+Q+ L
Sbjct: 146 PGGTKMDTASMLDEAIRYVKFLKRQIRLL 174
>gi|357130303|ref|XP_003566789.1| PREDICTED: uncharacterized protein LOC100831535 [Brachypodium
distachyon]
Length = 455
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 77/108 (71%), Gaps = 10/108 (9%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIHI-------DPESIKPPKRRNVKISKDPQSVAA 176
Y P E ++A ++EMI+R AAM+P+ + D E P RRNV+IS DPQ+VAA
Sbjct: 291 YEPDTE---ALAQVKEMIYRAAAMRPVTLGCNGGDEDTERAPAPGRRNVRISSDPQTVAA 347
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
R RRE ISER+R+LQR+VPGG KMDTASMLDEA Y++FLK Q+ L+
Sbjct: 348 RQRRERISERLRVLQRLVPGGAKMDTASMLDEAASYLRFLKAQIRDLQ 395
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 79/103 (76%), Gaps = 5/103 (4%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIHIDPE--SIKPPKRRNVKISKDPQSVAARHRRE 181
Y P E ++A ++EMI+R AAM+P+ + E + + P+RRNV+IS DPQ+VAAR RRE
Sbjct: 278 YEPDTE---ALAQVKEMIYRAAAMRPVSLGSEEDAGERPRRRNVRISSDPQTVAARQRRE 334
Query: 182 MISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
ISER+R+LQ++VPGG KMDTASMLDEA Y++FL+ QV L+
Sbjct: 335 RISERLRVLQKLVPGGAKMDTASMLDEAASYLRFLQSQVRELQ 377
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/68 (80%), Positives = 63/68 (92%)
Query: 160 PKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQ 219
PKRRNV+ISKDPQSVAARHRRE IS+R+R+LQ VPGGTKMDTASMLDEAIHYVKFL++Q
Sbjct: 381 PKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKFLQQQ 440
Query: 220 VHTLEQAG 227
+ TLE+ G
Sbjct: 441 LQTLERIG 448
>gi|288901043|gb|ADC68234.1| bHLH transcription factor [Brassica oleracea]
Length = 180
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 3/90 (3%)
Query: 142 FRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMD 201
+ IAAMQP+ IDP ++ P RRNV++S+DPQ+V AR RRE ISE+IRIL+R+VPGG KMD
Sbjct: 75 YAIAAMQPVDIDPATVPKPNRRNVRVSEDPQTVVARRRRERISEKIRILKRMVPGGAKMD 134
Query: 202 TASMLDEAIHYVKFLKKQVHTLE---QAGA 228
TASMLDEAI Y KFLK+QV L+ Q GA
Sbjct: 135 TASMLDEAIRYTKFLKRQVRLLQPHTQLGA 164
>gi|288901045|gb|ADC68235.1| bHLH transcription factor [Brassica rapa subsp. pekinensis]
Length = 171
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 71/87 (81%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
M M++M + IAAMQP+ +DP ++ P RRNV++S DPQ+V AR RRE ISE+IRIL+R+
Sbjct: 70 MDPMKKMQYAIAAMQPVDLDPATVPKPNRRNVRVSDDPQTVVARRRRERISEKIRILKRM 129
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQV 220
VPGG KMDTASMLDEAI Y KFLK+QV
Sbjct: 130 VPGGAKMDTASMLDEAIRYTKFLKRQV 156
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 80/113 (70%), Gaps = 15/113 (13%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIHI-------DPESIKP-----PKRRNVKISKDP 171
Y P E ++A ++EMI+R AAM+P+ + DP P P+R+NV+IS DP
Sbjct: 223 YEPDTE---AIAQVKEMIYRAAAMRPVTLGGAASASDPSFAAPQPPQRPRRKNVRISSDP 279
Query: 172 QSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
Q+VAAR RRE +SER+R+LQR+VPGG+KMDTA+MLDEA Y+KFLK Q+ LE
Sbjct: 280 QTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALE 332
>gi|342298444|emb|CBY05412.1| INDEHISCENT-like protein [Aethionema carneum]
Length = 176
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 70/87 (80%)
Query: 138 REMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGG 197
+EM + IAAMQP+ IDP ++ P RRNV+IS DPQ+V A RRE ISE+IRIL+RIVPGG
Sbjct: 66 KEMQYMIAAMQPVDIDPATVPKPYRRNVRISDDPQTVVAXRRRERISEKIRILKRIVPGG 125
Query: 198 TKMDTASMLDEAIHYVKFLKKQVHTLE 224
KMD+ASMLDEAI Y KFLK+QV L+
Sbjct: 126 AKMDSASMLDEAIRYTKFLKRQVRMLQ 152
>gi|168023485|ref|XP_001764268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684420|gb|EDQ70822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 74/87 (85%), Gaps = 2/87 (2%)
Query: 136 AMREMIFRIAAMQPI-HIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIV 194
++R ++FR A+ QPI ++ + PKRRNV+ISKDPQSVAARHRRE IS+RIR+LQR+V
Sbjct: 1 SVRAILFRHAS-QPIPTLEEIASSRPKRRNVRISKDPQSVAARHRRERISDRIRVLQRLV 59
Query: 195 PGGTKMDTASMLDEAIHYVKFLKKQVH 221
PGGTKMDTASMLDEAIHYVKFLK Q+
Sbjct: 60 PGGTKMDTASMLDEAIHYVKFLKLQLQ 86
>gi|449458249|ref|XP_004146860.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 72/91 (79%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
++ M+E I+ A +P+++ E+++ +R+NVK+SK+PQ+VAAR RRE ISE+IR+LQR+
Sbjct: 155 VSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRVLQRL 214
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGG+KMD SMLDEA Y+KFL+ Q+ LE
Sbjct: 215 VPGGSKMDIGSMLDEAASYLKFLRAQIKALE 245
>gi|449476926|ref|XP_004154878.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 72/91 (79%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
++ M+E I+ A +P+++ E+++ +R+NVK+SK+PQ+VAAR RRE ISE+IR+LQR+
Sbjct: 155 VSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRVLQRL 214
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
VPGG+KMD SMLDEA Y+KFL+ Q+ LE
Sbjct: 215 VPGGSKMDIGSMLDEAASYLKFLRAQIKALE 245
>gi|449448090|ref|XP_004141799.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 393
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 79/95 (83%)
Query: 133 SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
++A M+EMI+R AA +P+++ E I+ PKR+NV+IS DPQ+VAAR RRE ISERIR+LQR
Sbjct: 252 AIAQMKEMIYRAAAFRPVNLGLEMIEKPKRKNVRISSDPQTVAARQRRERISERIRVLQR 311
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
+VPGG+KMDTASMLDEA +Y+KFLK Q+ LE G
Sbjct: 312 LVPGGSKMDTASMLDEAANYLKFLKSQIKALENLG 346
>gi|255549698|ref|XP_002515900.1| DNA binding protein, putative [Ricinus communis]
gi|223544805|gb|EEF46320.1| DNA binding protein, putative [Ricinus communis]
Length = 395
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 89/123 (72%), Gaps = 6/123 (4%)
Query: 133 SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
++A M+EMI+R AA +P+++ E ++ PKR+NV+IS DPQ+VAAR RRE ISERIR+LQR
Sbjct: 256 AIAQMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQR 315
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYPSLVK 252
+VPGG+KMDTASMLDEA +Y+KFL+ QV LE G + +P +A+ SL
Sbjct: 316 LVPGGSKMDTASMLDEAANYLKFLRSQVKALENLGHKLEV------NSPPTNIAFSSLPF 369
Query: 253 ASH 255
SH
Sbjct: 370 NSH 372
>gi|357158743|ref|XP_003578226.1| PREDICTED: uncharacterized protein LOC100844721 [Brachypodium
distachyon]
Length = 247
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/97 (71%), Positives = 79/97 (81%), Gaps = 8/97 (8%)
Query: 136 AMREMIFRIAAMQPIHIDPE------SIKPPK--RRNVKISKDPQSVAARHRREMISERI 187
AMREMIF IAA+QP+ D + +++P K RRNV+ SKDPQSVAAR RRE ISERI
Sbjct: 125 AMREMIFHIAALQPVMNDDDDVEAAGAVRPAKKQRRNVRTSKDPQSVAARLRRERISERI 184
Query: 188 RILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
R+LQR+VPGGTKMDTASMLDEAIHYVKFLK QV +LE
Sbjct: 185 RVLQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLE 221
>gi|219363295|ref|NP_001136892.1| uncharacterized protein LOC100217048 [Zea mays]
gi|194697492|gb|ACF82830.1| unknown [Zea mays]
gi|414589607|tpg|DAA40178.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 81/102 (79%), Gaps = 8/102 (7%)
Query: 137 MREMIFRIAAMQPIHI------DPESI--KPPKRRNVKISKDPQSVAARHRREMISERIR 188
MRE IFRIAA+QP+ +PE+ + PKRRNV++SKDPQSVAAR RRE ISERIR
Sbjct: 126 MREAIFRIAALQPVEDQTTTGPEPEAAVRRAPKRRNVRVSKDPQSVAARLRRERISERIR 185
Query: 189 ILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHR 230
LQR+VPGGTKMDTASMLDEAI YVKFLK Q+ +L++A A R
Sbjct: 186 ALQRLVPGGTKMDTASMLDEAIQYVKFLKSQLQSLQRAAASR 227
>gi|326523389|dbj|BAJ88735.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 76/108 (70%), Gaps = 16/108 (14%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPI------------HIDPESIKPPKRRNVKISKDP 171
Y P E ++A ++EMI+R AAM+P+ H +P KP +R+NV+IS DP
Sbjct: 249 YEPDTE---AIAQVKEMIYRAAAMRPLPSLTGASAGDPTH-EPSPSKPRRRKNVRISSDP 304
Query: 172 QSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQ 219
Q+VAAR RRE +SER+R LQR+VPGG+KMDTASMLDEA Y+KFLK Q
Sbjct: 305 QTVAARLRREKVSERLRALQRLVPGGSKMDTASMLDEAASYLKFLKSQ 352
>gi|357454723|ref|XP_003597642.1| Transcription factor bHLH87 [Medicago truncatula]
gi|355486690|gb|AES67893.1| Transcription factor bHLH87 [Medicago truncatula]
Length = 392
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 80/96 (83%), Gaps = 1/96 (1%)
Query: 133 SMAAMREMIFRIAAMQPI-HIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQ 191
++A M+EMI+R AA +P+ ++ E ++ PKR+NVKISKDPQ+VAAR RRE ISERIR+LQ
Sbjct: 261 AIAQMKEMIYRAAAFRPVTNLGLEVMEKPKRKNVKISKDPQTVAARQRRERISERIRVLQ 320
Query: 192 RIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
+IVPGGTKMDTASMLDEA +Y+KFL+ QV LE G
Sbjct: 321 KIVPGGTKMDTASMLDEAANYLKFLRAQVKELENIG 356
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 75/113 (66%), Gaps = 15/113 (13%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKR------------RNVKISKDP 171
Y P E ++A ++EMI+R AAM+P+ + + +NV+IS DP
Sbjct: 179 YEPDTE---AIAQVKEMIYRAAAMRPVTLGGAASASDPSSAAPPPPQRPRRKNVRISSDP 235
Query: 172 QSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
Q+VAAR RRE +SER+R+LQR+VPGG+KMDTA+MLDEA Y+KFLK Q+ LE
Sbjct: 236 QTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALE 288
>gi|359482873|ref|XP_003632856.1| PREDICTED: transcription factor bHLH87-like [Vitis vinifera]
Length = 471
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 121 PSPYPPTLEKRNS--MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARH 178
PS ++E+ +S +A M+E+I+R AA +P++ ++++ PKR+NV+IS DPQ+VAAR
Sbjct: 320 PSSSASSVEEPDSEAIAQMKEIIYRAAAFRPVNFGMDAVEKPKRKNVRISTDPQTVAARQ 379
Query: 179 RREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
RRE ISERIR+LQR+VPGG KMDTASMLDEA +Y+KFL+ QV LE G
Sbjct: 380 RRERISERIRVLQRLVPGGNKMDTASMLDEAANYLKFLRSQVKALETLG 428
>gi|147797615|emb|CAN65002.1| hypothetical protein VITISV_023488 [Vitis vinifera]
Length = 447
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 121 PSPYPPTLEKRNS--MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARH 178
PS ++E+ +S +A M+E+I+R AA +P++ ++++ PKR+NV+IS DPQ+VAAR
Sbjct: 296 PSSSASSVEEPDSEAIAQMKEIIYRAAAFRPVNFGMDAVEKPKRKNVRISTDPQTVAARQ 355
Query: 179 RREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
RRE ISERIR+LQR+VPGG KMDTASMLDEA +Y+KFL+ QV LE G
Sbjct: 356 RRERISERIRVLQRLVPGGNKMDTASMLDEAANYLKFLRSQVKALETLG 404
>gi|168017686|ref|XP_001761378.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687384|gb|EDQ73767.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 160 PKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
PKRRNV+ISKDPQSVAARHRRE IS+R+R+LQ VPGGTKMDTASMLDEAIHYVKF
Sbjct: 361 PKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKF 416
>gi|449480726|ref|XP_004155978.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH87-like
[Cucumis sativus]
Length = 383
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 75/95 (78%)
Query: 133 SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
++A M+EMI+R AA +P+++ E I+ PKR+NV+IS DPQ+VAAR RRE ISERIR+LQR
Sbjct: 252 AIAQMKEMIYRAAAFRPVNLGLEMIEKPKRKNVRISSDPQTVAARQRRERISERIRVLQR 311
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
+VPGG+KMDTASMLDEA K LK Q+ LE G
Sbjct: 312 LVPGGSKMDTASMLDEAAXLSKVLKSQIKALENLG 346
>gi|168042091|ref|XP_001773523.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675225|gb|EDQ61723.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 706
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 52/56 (92%)
Query: 160 PKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
PKRRNV+IS DPQSVAARHRRE IS+R+R+LQ VPGGTKMDTASMLDEAIHYVKF
Sbjct: 503 PKRRNVRISSDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKF 558
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 77/113 (68%), Gaps = 15/113 (13%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIHIDP------------ESIKPPKRRNVKISKDP 171
Y P E ++A ++EM++R A M+P+ + + P+R+NV+IS DP
Sbjct: 249 YEPDTE---AIAQVKEMVYRAAPMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDP 305
Query: 172 QSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
Q+VAAR RRE +SER+R+LQR+VPGG+KMDTA+MLDEA Y+KFLK Q+ LE
Sbjct: 306 QTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALE 358
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 77/113 (68%), Gaps = 15/113 (13%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIHIDP------------ESIKPPKRRNVKISKDP 171
Y P E ++A ++EM++R A M+P+ + + P+R+NV+IS DP
Sbjct: 251 YEPDTE---AIAQVKEMVYRAAPMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDP 307
Query: 172 QSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
Q+VAAR RRE +SER+R+LQR+VPGG+KMDTA+MLDEA Y+KFLK Q+ LE
Sbjct: 308 QTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALE 360
>gi|140084395|gb|ABO84937.1| indehiscent 1 [Physcomitrella patens]
Length = 67
Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats.
Identities = 48/59 (81%), Positives = 54/59 (91%)
Query: 166 KISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+ISKDPQSVAARHRRE IS+RIR+LQR+VPGGTKMDTASMLDEAIHYVKFLK Q+ +
Sbjct: 1 RISKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQVCD 59
>gi|212721432|ref|NP_001131577.1| uncharacterized protein LOC100192921 [Zea mays]
gi|194691908|gb|ACF80038.1| unknown [Zea mays]
gi|414881478|tpg|DAA58609.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|414881479|tpg|DAA58610.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 427
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 53/62 (85%)
Query: 163 RNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHT 222
RNV+IS DPQ+VAAR RRE IS+R+R+LQ++VPGG KMDTASMLDEA Y++FLK QV
Sbjct: 314 RNVRISSDPQTVAARQRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVRD 373
Query: 223 LE 224
L+
Sbjct: 374 LQ 375
>gi|449461799|ref|XP_004148629.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
gi|449532778|ref|XP_004173357.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 195
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 48/56 (85%)
Query: 165 VKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
VK+S DPQSVAAR RR IS+R +ILQ +VPGGTKMDT SMLDEAIHYVKFLK Q+
Sbjct: 46 VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 101
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 54/71 (76%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
PE + + S +PQSVAARHRR+ ISERIR+L++++PGG KMDTA+MLDEAI YV
Sbjct: 373 PEEGRLCNGKPAATSVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYV 432
Query: 214 KFLKKQVHTLE 224
KFL+ QV LE
Sbjct: 433 KFLQLQVQILE 443
>gi|227016421|gb|ACP18672.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 7/81 (8%)
Query: 166 KISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK QV +L Q
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-SLHQ 110
Query: 226 AGA---HRPMGGVG---FQGA 240
A GGVG F GA
Sbjct: 111 AALVQHEEGCGGVGHGEFAGA 131
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 51/60 (85%)
Query: 165 VKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
V S +PQSVAARHRR+ ISERIR+L++++PGG KMDTA+MLDEAI YVKFL+ QV LE
Sbjct: 12 VATSVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQILE 71
>gi|227016419|gb|ACP18671.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 7/81 (8%)
Query: 166 KISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK QV +L Q
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-SLHQ 110
Query: 226 AGA---HRPMGGVG---FQGA 240
A GGVG F GA
Sbjct: 111 AALVQHEEGCGGVGHGEFAGA 131
>gi|357131240|ref|XP_003567247.1| PREDICTED: transcription factor LAX PANICLE-like [Brachypodium
distachyon]
Length = 228
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 161 KRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
+R K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK QV
Sbjct: 55 RRPGTKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV 114
Query: 221 HTLEQA 226
TL QA
Sbjct: 115 -TLHQA 119
>gi|51090503|dbj|BAD35705.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 211
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 52/62 (83%)
Query: 167 ISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
+S +PQSVAAR RRE +S+R+R LQR+VPGG ++DTASML+EAI YVKFLK V +LE+A
Sbjct: 120 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSLERA 179
Query: 227 GA 228
A
Sbjct: 180 AA 181
>gi|125554507|gb|EAZ00113.1| hypothetical protein OsI_22119 [Oryza sativa Indica Group]
Length = 201
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 52/62 (83%)
Query: 167 ISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
+S +PQSVAAR RRE +S+R+R LQR+VPGG ++DTASML+EAI YVKFLK V +LE+A
Sbjct: 121 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSLERA 180
Query: 227 GA 228
A
Sbjct: 181 AA 182
>gi|227016424|gb|ACP18673.1| barren stalk1-like protein [Leymus triticoides]
Length = 158
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 7/81 (8%)
Query: 166 KISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK QV +L Q
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-SLHQ 109
Query: 226 AGA---HRPMGGVG---FQGA 240
A GGVG F GA
Sbjct: 110 AALVQHEEGCGGVGHGEFAGA 130
>gi|227016415|gb|ACP18669.1| barren stalk1-like protein [Leymus cinereus]
Length = 149
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 7/81 (8%)
Query: 166 KISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK QV +L Q
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-SLHQ 110
Query: 226 AGA---HRPMGGVG---FQGA 240
A GGVG F GA
Sbjct: 111 AALVQHEEGCGGVGHGEFAGA 131
>gi|224091579|ref|XP_002334947.1| predicted protein [Populus trichocarpa]
gi|222875273|gb|EEF12404.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 48/57 (84%)
Query: 164 NVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
VK+S DPQSVAAR RR IS+R +ILQ +VPGGTKMDT SML+EAI+YVKFLK QV
Sbjct: 34 GVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKTQV 90
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 48/56 (85%)
Query: 165 VKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
VK+S DPQSVAAR RR IS+R +ILQ +VPGGTKMDT SML+EAI+YVKFLK Q+
Sbjct: 35 VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKNQI 90
>gi|62466473|gb|AAX83562.1| LAX [Oryza barthii]
gi|62466475|gb|AAX83563.1| LAX [Oryza meridionalis]
gi|62466477|gb|AAX83564.1| LAX [Oryza longistaminata]
gi|62466479|gb|AAX83565.1| LAX [Oryza glumipatula]
gi|62466481|gb|AAX83566.1| LAX [Oryza nivara]
gi|62466483|gb|AAX83567.1| LAX [Oryza rufipogon]
gi|62466485|gb|AAX83568.1| LAX [Oryza sativa Japonica Group]
gi|62466487|gb|AAX83569.1| LAX [Oryza sativa Japonica Group]
gi|62466489|gb|AAX83570.1| LAX [Oryza sativa Japonica Group]
gi|62466493|gb|AAX83572.1| LAX [Oryza sativa Japonica Group]
gi|62466495|gb|AAX83573.1| LAX [Oryza sativa Indica Group]
gi|62466497|gb|AAX83574.1| LAX [Oryza sativa Indica Group]
gi|62466501|gb|AAX83576.1| LAX [Oryza sativa Indica Group]
gi|62466511|gb|AAX83581.1| LAX [Oryza sativa Indica Group]
gi|62466517|gb|AAX83584.1| LAX [Oryza rufipogon]
Length = 189
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 165 VKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK QV TL
Sbjct: 22 AKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLH 80
Query: 225 QA 226
QA
Sbjct: 81 QA 82
>gi|62466521|gb|AAX83586.1| LAX [Oryza rufipogon]
Length = 190
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 166 KISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK QV TL Q
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLHQ 81
Query: 226 A 226
A
Sbjct: 82 A 82
>gi|115440839|ref|NP_001044699.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|68565366|sp|Q7XAQ6.1|LAX_ORYSJ RecName: Full=Transcription factor LAX PANICLE
gi|33342172|dbj|BAC80247.1| transcription factor [Oryza sativa Japonica Group]
gi|56785174|dbj|BAD81850.1| transcription factor [Oryza sativa Japonica Group]
gi|113534230|dbj|BAF06613.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|342674132|gb|AEL31274.1| LAX protein [Oryza sativa Japonica Group]
Length = 215
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 165 VKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK QV TL
Sbjct: 38 AKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLH 96
Query: 225 QA 226
QA
Sbjct: 97 QA 98
>gi|62466519|gb|AAX83585.1| LAX [Oryza rufipogon]
Length = 189
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 165 VKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK QV TL
Sbjct: 22 AKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLH 80
Query: 225 QA 226
QA
Sbjct: 81 QA 82
>gi|62466491|gb|AAX83571.1| LAX [Oryza sativa Japonica Group]
gi|62466499|gb|AAX83575.1| LAX [Oryza sativa Indica Group]
gi|62466503|gb|AAX83577.1| LAX [Oryza sativa Indica Group]
gi|62466505|gb|AAX83578.1| LAX [Oryza sativa Indica Group]
gi|62466507|gb|AAX83579.1| LAX [Oryza sativa Indica Group]
gi|62466509|gb|AAX83580.1| LAX [Oryza sativa Indica Group]
gi|62466513|gb|AAX83582.1| LAX [Oryza rufipogon]
gi|62466515|gb|AAX83583.1| LAX [Oryza rufipogon]
Length = 189
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 165 VKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK QV TL
Sbjct: 22 AKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLH 80
Query: 225 QA 226
QA
Sbjct: 81 QA 82
>gi|62466523|gb|AAX83587.1| LAX [Oryza rufipogon]
Length = 189
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 166 KISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK QV TL Q
Sbjct: 23 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLHQ 81
Query: 226 A 226
A
Sbjct: 82 A 82
>gi|147838921|emb|CAN77067.1| hypothetical protein VITISV_022410 [Vitis vinifera]
gi|297735648|emb|CBI18142.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 46/54 (85%)
Query: 167 ISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
+S DPQSVAAR RR IS+R +ILQ +VPGGTKMDT SML+EAIHYVK+LK Q+
Sbjct: 36 LSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAIHYVKYLKTQI 89
>gi|242059137|ref|XP_002458714.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
gi|241930689|gb|EES03834.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
Length = 232
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 164 NVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK Q+ +L
Sbjct: 54 GAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQI-SL 112
Query: 224 EQA 226
QA
Sbjct: 113 HQA 115
>gi|125528258|gb|EAY76372.1| hypothetical protein OsI_04303 [Oryza sativa Indica Group]
Length = 223
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 165 VKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KM+T SML++AIHYVKFLK QV TL
Sbjct: 46 AKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMETVSMLEQAIHYVKFLKAQV-TLH 104
Query: 225 QA 226
QA
Sbjct: 105 QA 106
>gi|162459126|ref|NP_001105271.1| barren stalk1 [Zea mays]
gi|56384213|gb|AAV85767.1| barren stalk1 [Zea mays]
gi|56384215|gb|AAV85768.1| barren stalk1 [Zea mays]
gi|223946525|gb|ACN27346.1| unknown [Zea mays]
gi|414879869|tpg|DAA57000.1| TPA: barren stalk1 [Zea mays]
Length = 219
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 165 VKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK Q+ +L
Sbjct: 50 AKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKTQI-SLH 108
Query: 225 QA 226
QA
Sbjct: 109 QA 110
>gi|357506069|ref|XP_003623323.1| LAX [Medicago truncatula]
gi|355498338|gb|AES79541.1| LAX [Medicago truncatula]
Length = 153
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 47/54 (87%)
Query: 167 ISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
+S DPQSVAAR RR IS+R +ILQ ++PGG+K+DT SML+EAIHYVKFLKKQ+
Sbjct: 32 LSTDPQSVAARERRHRISDRFKILQSMIPGGSKLDTVSMLEEAIHYVKFLKKQI 85
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 4/75 (5%)
Query: 166 KISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
K + +PQS+AAR RR+ ISER+R L+++VPGG K+DTASMLDEAI +VKFL+ QV LE
Sbjct: 383 KETVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEA 442
Query: 226 AGAHRPMGGVGFQGA 240
G GG G GA
Sbjct: 443 VGN----GGHGNYGA 453
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 4/75 (5%)
Query: 166 KISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
K + +PQS+AAR RR+ ISER+R L+++VPGG K+DTASMLDEAI +VKFL+ QV LE
Sbjct: 383 KETVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEA 442
Query: 226 AGAHRPMGGVGFQGA 240
G GG G GA
Sbjct: 443 VGN----GGHGNYGA 453
>gi|326527333|dbj|BAK04608.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 166 KISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMD SML++AIHYVKFLK QV +L Q
Sbjct: 52 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDNVSMLEQAIHYVKFLKAQV-SLHQ 110
Query: 226 A 226
A
Sbjct: 111 A 111
>gi|15240948|ref|NP_195751.1| aprataxin [Arabidopsis thaliana]
gi|75335734|sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic
helix-loop-helix protein 140; Short=AtbHLH140;
Short=bHLH 140; AltName: Full=Transcription factor EN
122; AltName: Full=bHLH transcription factor bHLH140
gi|7320709|emb|CAB81914.1| putative protein [Arabidopsis thaliana]
gi|332002943|gb|AED90326.1| aprataxin [Arabidopsis thaliana]
Length = 912
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 45/59 (76%)
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
R +S DPQSVAAR RR IS+R +ILQ +VPGG KMDT SMLDEAI YVKFLK Q+
Sbjct: 38 RSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQI 96
>gi|297810265|ref|XP_002873016.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318853|gb|EFH49275.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 898
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 45/59 (76%)
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
R +S DPQSVAAR RR ISER +ILQ +VPGG KMDT SML+EAI YVKFLK Q+
Sbjct: 38 RSTSTLSTDPQSVAARERRHRISERFKILQSMVPGGAKMDTVSMLEEAIRYVKFLKAQI 96
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DPQS+ AR RRE I+ER+RILQ++VP GTK+D ++ML+EA+HYVKFL+
Sbjct: 234 KPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQ 293
Query: 218 KQVHTL 223
Q+ L
Sbjct: 294 LQIKLL 299
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DPQS+ AR RRE I+ER+RILQ++VP GTK+D ++ML+EA+HYVKFL+
Sbjct: 234 KPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQ 293
Query: 218 KQVHTL 223
Q+ L
Sbjct: 294 LQIKLL 299
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP RR + DPQSV ARHRRE I+ER++ LQ +VP G K+D +MLDEAIHYV+FL+
Sbjct: 441 KPRARRGS--ATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQ 498
Query: 218 KQVHTLE 224
QV L+
Sbjct: 499 LQVTLLK 505
>gi|125605938|gb|EAZ44974.1| hypothetical protein OsJ_29617 [Oryza sativa Japonica Group]
Length = 287
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 55/61 (90%)
Query: 136 AMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVP 195
AMREMIF IAA+QP+ IDPE+++PPKRRNV+ISKDPQSVAAR RRE ISERIRILQR P
Sbjct: 116 AMREMIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRILQRPRP 175
Query: 196 G 196
G
Sbjct: 176 G 176
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP +R + DPQSV ARHRRE I+ER++ LQ +VP G K+D +MLDEAIHYVKFL+
Sbjct: 441 KPRAKRGS--ATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQ 498
Query: 218 KQVHTLE 224
QV L+
Sbjct: 499 TQVELLK 505
>gi|356537912|ref|XP_003537450.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 12/120 (10%)
Query: 112 GRLKTSLPSPSPYPPTLEKRNSMAAMREMIFR--------IAAMQPIHIDPESIKPPKRR 163
G+ + L P+P P + + A ++ + AA + I+ ++ K
Sbjct: 186 GQSSSGLLYPAPTIPNASSLHKLGAQESVLQKRPFMGESMKAAKKQCSIESKTTK----H 241
Query: 164 NVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
N SKDPQSVAA++RRE ISER++ILQ +VP G+K+D +ML++AI YVKFL+ QV L
Sbjct: 242 NSSPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 301
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 47/56 (83%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+KDPQS+AA++RRE ISER+RILQ +VP GTK+D +ML++AI YVKFL+ QV L
Sbjct: 204 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 259
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 47/56 (83%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+KDPQS+AA++RRE ISER+RILQ +VP GTK+D +ML++AI YVKFL+ QV L
Sbjct: 188 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 243
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 47/56 (83%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+KDPQS+AA++RRE ISER+RILQ +VP GTK+D +ML++AI YVKFL+ QV L
Sbjct: 204 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 259
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 47/56 (83%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+KDPQS+AA++RRE ISER+RILQ +VP GTK+D +ML++AI YVKFL+ QV L
Sbjct: 206 TKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 261
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 46/54 (85%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ++VP GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 246 DPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 299
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P S K R N + DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YV
Sbjct: 180 PSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYV 239
Query: 214 KFLKKQVHTL 223
KFL+ Q+ L
Sbjct: 240 KFLQLQIKLL 249
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P S K R N + DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YV
Sbjct: 180 PSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYV 239
Query: 214 KFLKKQVHTL 223
KFL+ Q+ L
Sbjct: 240 KFLQLQIKLL 249
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 216 DPQSIYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 269
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%)
Query: 146 AMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASM 205
A+ + +S+K + N I+ DPQS+ AR RRE I++R++ LQ +VP GTK+D ++M
Sbjct: 118 ALGLVSNTSKSLKRKAKSNKGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTM 177
Query: 206 LDEAIHYVKFLKKQVHTL 223
L++A+HYVKFL+ Q+ L
Sbjct: 178 LEDAVHYVKFLQLQIKLL 195
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP +R + DPQSV ARHRRE I+ER++ LQ +VP G K+D +ML+EAIHYVKFL+
Sbjct: 210 KPRAKRGS--ATDPQSVYARHRRERINERLKTLQHLVPNGAKVDIVTMLEEAIHYVKFLQ 267
Query: 218 KQVHTL 223
QV+ L
Sbjct: 268 LQVNML 273
>gi|356569373|ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 47/56 (83%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
SKDPQSVAA++RRE ISER++ILQ +VP G+K+D +ML++AI YVKFL+ QV L
Sbjct: 246 SKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 301
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 274 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 327
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 272 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 325
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 12/86 (13%)
Query: 150 IHIDPESIKPPK-----RRNVKI-------SKDPQSVAARHRREMISERIRILQRIVPGG 197
+ +P+++ P K R+ K +KDPQS+AA++RRE ISER+R LQ +VP G
Sbjct: 184 VSAEPQAVSPKKHCGAGRKASKAKSPSTTPTKDPQSLAAKNRRERISERLRTLQELVPNG 243
Query: 198 TKMDTASMLDEAIHYVKFLKKQVHTL 223
TK+D +ML++AI YVKFL+ QV L
Sbjct: 244 TKVDLVTMLEKAISYVKFLQLQVKVL 269
>gi|356499097|ref|XP_003518380.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 295
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 169 KDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
KDPQSVAA++RRE ISER++ILQ +VP G+K+D +ML++AI YVKFL+ QV L
Sbjct: 210 KDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 264
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 146 AMQPIHIDPES-IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTAS 204
+MQ + +S K PK ++ +KDPQS+AA++RRE ISER+++LQ +VP G+K+D +
Sbjct: 211 SMQALKKQRDSATKKPKPKSAGPAKDPQSIAAKNRRERISERLKMLQDLVPNGSKVDLVT 270
Query: 205 MLDEAIHYVKFLKKQVHTL 223
ML++AI YVKFL+ QV L
Sbjct: 271 MLEKAISYVKFLQLQVKVL 289
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 146 AMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASM 205
A+ + +S+K + N I+ DPQS+ AR RRE I++R++ LQ +VP GTK+D ++M
Sbjct: 117 ALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTM 176
Query: 206 LDEAIHYVKFLKKQVHTL--EQAGAHRPMGGVGF 237
L++A+HYVKFL+ Q+ L E + P+ G
Sbjct: 177 LEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGL 210
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 11/80 (13%)
Query: 155 ESIKPPKRRNVKIS-----------KDPQSVAARHRREMISERIRILQRIVPGGTKMDTA 203
ES +P K+ N ++ KDPQS+AA++RRE ISER++ILQ +VP GTK+D
Sbjct: 176 ESTQPSKKPNSGVTGKAKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLV 235
Query: 204 SMLDEAIHYVKFLKKQVHTL 223
+ML++AI YVKFL+ QV L
Sbjct: 236 TMLEKAISYVKFLQVQVKVL 255
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S+K R + DPQS+ AR RRE I+ER++ LQ +VP GTK+D ++ML+EA+HYVKF
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKF 221
Query: 216 LKKQVHTL 223
L+ Q+ L
Sbjct: 222 LQLQIKLL 229
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+ DPQSV ARHRRE I+ER++ LQ +VP G K+D +MLDEAIHYVKFL+ QV L+
Sbjct: 3 ATDPQSVYARHRREKINERLKSLQNLVPNGAKVDIVTMLDEAIHYVKFLQNQVELLK 59
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 7/75 (9%)
Query: 156 SIKPPKRRNVKIS-------KDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDE 208
S KP N KI KDPQS+AA++RRE ISER+++LQ +VP GTK+D +ML++
Sbjct: 189 SKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEK 248
Query: 209 AIHYVKFLKKQVHTL 223
AI YVKFL+ QV L
Sbjct: 249 AIGYVKFLQVQVKVL 263
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 296 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 349
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 102 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 155
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 47/56 (83%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
SKDPQS+AA++RRE ISER++ILQ +VP G+K+D +ML++AI YVKFL+ QV L
Sbjct: 232 SKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 287
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 296 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 349
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S+K R + DPQS+ AR RRE I+ER++ LQ +VP GTK+D ++ML+EA+HYVKF
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKF 221
Query: 216 LKKQVHTL 223
L+ Q+ L
Sbjct: 222 LQLQIKLL 229
>gi|356551793|ref|XP_003544258.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 110
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
S+DPQSVAA++RRE ISER++ILQ +VP G+K+D +ML++AI YVKFL+ QV L A
Sbjct: 24 SQDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA-AD 82
Query: 228 AHRPMGG 234
P+ G
Sbjct: 83 EFWPVQG 89
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 7/75 (9%)
Query: 156 SIKPPKRRNVKIS-------KDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDE 208
S KP N KI KDPQS+AA++RRE ISER+++LQ +VP GTK+D +ML++
Sbjct: 121 SKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEK 180
Query: 209 AIHYVKFLKKQVHTL 223
AI YVKFL+ QV L
Sbjct: 181 AIGYVKFLQVQVKVL 195
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+K R + DPQS+ AR RRE I+ER++ILQ +VP GTK+D ++ML+EA+ YVKFL
Sbjct: 242 LKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFL 301
Query: 217 KKQVHTL 223
+ Q+ L
Sbjct: 302 QLQIKLL 308
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P ++ R + DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YV
Sbjct: 257 PPNLDRKSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYV 316
Query: 214 KFLKKQVHTL 223
KFL+ Q+ L
Sbjct: 317 KFLQLQIKLL 326
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+ DPQSV ARHRRE I+ER++ LQ +VP G K+D +MLDEAIHYVKFL+ QV L+
Sbjct: 3 ATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQVELLK 59
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S+K R + DPQS+ AR RRE I+ER++ LQ +VP GTK+D ++ML+EA+HYVKF
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKF 221
Query: 216 LKKQV 220
L+ Q+
Sbjct: 222 LQLQI 226
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+KDPQS+AA++RRE ISER+R LQ +VP GTK+D +ML++AI YVKFL+ QV L
Sbjct: 201 TKDPQSLAAKNRRERISERLRALQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 256
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R + + SKD QS+ A+ RRE I+ER+RILQ++VP GTK+D ++ML+EA+ YVKFL+ Q+
Sbjct: 168 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIK 227
Query: 222 TL 223
L
Sbjct: 228 LL 229
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R + DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YVKFL+ Q+
Sbjct: 265 RATTGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIK 324
Query: 222 TL 223
L
Sbjct: 325 LL 326
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R + + SKD QS+ A+ RRE I+ER+RILQ++VP GTK+D ++ML+EA+ YVKFL+ Q+
Sbjct: 156 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIK 215
Query: 222 TL 223
L
Sbjct: 216 LL 217
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 169 KDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
KDPQS+AA++RRE ISER+++LQ +VP GTK+D +ML++AI YVKFL+ QV L
Sbjct: 209 KDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVL 263
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 169 KDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
KDPQS+AA++RRE ISER++ILQ +VP GTK+D +ML++AI YVKFL+ QV L
Sbjct: 203 KDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVL 257
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 47/62 (75%)
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R N + DPQS+ AR RRE I+ER+R LQ +VP GTK+D ++ML++AIHYVKFL+ Q+
Sbjct: 199 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIK 258
Query: 222 TL 223
L
Sbjct: 259 LL 260
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
K R S DPQS+ AR RRE I+ER++ LQ +VP GTK+D ++ML+EA+HYVKFL+
Sbjct: 212 KGKARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTKVDMSTMLEEAVHYVKFLQ 271
Query: 218 KQVHTL 223
Q+ L
Sbjct: 272 LQIKVL 277
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 47/62 (75%)
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R N + DPQS+ AR RRE I+ER+R LQ +VP GTK+D ++ML++AIHYVKFL+ Q+
Sbjct: 185 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIK 244
Query: 222 TL 223
L
Sbjct: 245 LL 246
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+K R N + DPQ V A+ RRE I+ER++ILQ +VP GTK+D ++ML+EA+ YVKFL
Sbjct: 234 LKGKSRCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFL 293
Query: 217 KKQVHTL 223
+ Q+ L
Sbjct: 294 QVQIKLL 300
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 44/51 (86%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
DPQS+ AR RRE I+ER++ILQ IVP GTK+D ++ML+EA+HYVKFL+ Q+
Sbjct: 279 DPQSLYARKRRERINERLKILQHIVPNGTKVDISTMLEEAVHYVKFLQLQI 329
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YVKFL+ Q+ L
Sbjct: 256 DPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 309
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
KP R+ + DPQS+AARHRRE IS+R++ILQ +VP TK+D +ML++AI+YVKFL
Sbjct: 356 FKPRARQGS--ANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFL 413
Query: 217 KKQVHTLEQAGAHRPMGGVGFQGAPMAGVA 246
+ QV L + + P G +Q + A A
Sbjct: 414 QLQVKVL-TSDDYWPSGAT-WQNSSKADTA 441
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
Query: 160 PKRRNVK--ISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
PK++ K +KDPQS+AA++RRE ISER++ILQ +VP G+K+D +ML++AI YVKFL+
Sbjct: 178 PKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQ 237
Query: 218 KQVHTL 223
QV L
Sbjct: 238 LQVKIL 243
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
K R + +PQS+ AR RRE I+ER++ILQ +VP GTK+D ++ML+EA+HYVKFL+
Sbjct: 223 KGKGRAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVHYVKFLQ 282
Query: 218 KQVHTL 223
Q+ L
Sbjct: 283 LQIRLL 288
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA++YVKFL+ Q+ L
Sbjct: 273 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLL 326
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YVKFL+ Q+ L
Sbjct: 233 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 286
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER++ILQ ++P GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 241 DPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLL 294
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
K R + DPQS+ AR RRE I+ER++ LQ +VP GTK+D ++ML+EA+HYVKFL+
Sbjct: 213 KGKSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQ 272
Query: 218 KQVHTL 223
Q+ L
Sbjct: 273 LQIKLL 278
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R + + DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YVKFL+ Q+
Sbjct: 265 RASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIK 324
Query: 222 TL 223
L
Sbjct: 325 LL 326
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER++ILQ ++P GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 241 DPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLL 294
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER++ILQ ++P GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 241 DPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLL 294
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER++ILQ +VP GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 230 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLL 283
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+ DPQSV ARHRRE I+ER++ LQ +VP G K+D +MLDEAIHYV+FL+ QV L+
Sbjct: 3 ATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVTLLK 59
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQSV ARHRRE I+ER++ LQR+VP G ++D +ML+EAIH+VKFL+ Q+ L
Sbjct: 479 DPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQLELL 532
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER++ILQ +VP GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 230 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLL 283
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
K R + + DPQS+ AR RRE I+ER++ILQ +VP GTK+D ++ML+EA+ YVKFL+
Sbjct: 256 KDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQ 315
Query: 218 KQVHTL 223
Q+ L
Sbjct: 316 LQIKLL 321
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
K R + + DPQS+ AR RRE I+ER++ILQ +VP GTK+D ++ML+EA+ YVKFL+
Sbjct: 252 KDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQ 311
Query: 218 KQVHTL 223
Q+ L
Sbjct: 312 LQIKLL 317
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
K R + + DPQS+ AR RRE I+ER+RILQ++VP GTK+D ++ML+EA YVKFL+
Sbjct: 187 KAYTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAAQYVKFLQ 246
Query: 218 KQVHTL 223
Q+ L
Sbjct: 247 LQIKLL 252
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YVKFL+ Q+ L
Sbjct: 193 DPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 246
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
K R + + DPQS+ AR RRE I+ER++ILQ +VP GTK+D ++ML+EA+ YVKFL+
Sbjct: 251 KDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQ 310
Query: 218 KQVHTL 223
Q+ L
Sbjct: 311 LQIKLL 316
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YVKFL+ Q+ L
Sbjct: 246 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGA 228
DPQSV AR RRE I+ER+R LQ ++P G K+D +MLDEA+HYV+FLK+QV + G
Sbjct: 456 DPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQVTQSDADGG 514
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YVKFL+ Q+ L
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YVKFL+ Q+ L
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA++YVKFL+ Q+ L
Sbjct: 270 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLL 323
>gi|225453146|ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
gi|296087164|emb|CBI33538.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 169 KDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
KDPQS+AA++RRE ISER++ILQ +VP G+K+D +ML++AI YVKFL+ QV L
Sbjct: 255 KDPQSLAAKNRRERISERLKILQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 309
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 44/54 (81%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER++ILQ +VP GTK+D ++ML+EA+ YVKFL+ Q+ L
Sbjct: 233 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 286
>gi|227016417|gb|ACP18670.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 99
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 166 KISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVK 214
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVK
Sbjct: 51 KLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVK 99
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%)
Query: 160 PKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQ 219
P + + + DPQS+ AR RRE I+ER+++LQ +VP GTK+D ++ML+EA+ YVKFL+ Q
Sbjct: 217 PSGKGRQSTTDPQSLYARKRRERINERLKVLQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 276
Query: 220 VHTL 223
+ L
Sbjct: 277 IKLL 280
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R + DPQS+AAR RRE IS+R++ILQ ++P G+K+D +ML++AI+YVKFL
Sbjct: 406 LKP--RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFL 463
Query: 217 KKQVHTL 223
+ QV L
Sbjct: 464 QLQVKVL 470
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/57 (59%), Positives = 45/57 (78%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+ DPQSV AR RRE I+ER+R LQ ++P G K+D +MLDEA+HYV+FLK+QV L+
Sbjct: 3 ATDPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQVTLLK 59
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 44/54 (81%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER++ILQ +VP GTK+D ++ML+EA+HYV FL+ Q+ L
Sbjct: 281 DPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVHYVNFLQLQIKLL 334
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R + DPQS+AAR RRE IS+R++ILQ ++P G+K+D +ML++AI+YVKFL
Sbjct: 406 LKP--RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFL 463
Query: 217 KKQVHTL 223
+ QV L
Sbjct: 464 QLQVKVL 470
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 44/51 (86%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
DPQS+ AR RRE I+ER+R+LQ +VP GTK+D ++ML+EA++YVKFL+ Q+
Sbjct: 283 DPQSLYARKRRERINERLRVLQNLVPNGTKVDISTMLEEAVNYVKFLQTQI 333
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
KP R+ + DPQS+AARHRRE IS+R++ILQ +VP TK+D +ML++AI+YVKFL
Sbjct: 356 FKPRARQGS--ANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFL 413
Query: 217 KKQV 220
+ QV
Sbjct: 414 QLQV 417
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+++LQ +VP GTK+D ++ML+EA+HY+KF++ Q+ L
Sbjct: 255 DPQSLYARKRREKINERLKVLQNLVPNGTKVDISTMLEEAVHYIKFMQLQIKLL 308
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+PQS+ AR RRE I+ER+++LQ +VP GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLL 275
>gi|414877869|tpg|DAA55000.1| TPA: putative clathrin heavy chain family protein [Zea mays]
Length = 898
Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+PQS+ AR RRE I+ER+++LQ +VP GTK+D ++ML+EA+HYVKFL+ Q+ +
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLI 275
>gi|140084384|gb|ABO84936.1| Rhd6-like 7 [Physcomitrella patens]
Length = 67
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ DPQSV ARHRRE I+ER++ LQR+VP G ++D +ML+EAIH+VKFL+ Q+ L
Sbjct: 3 ATDPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQLELL 58
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
K R + + DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA YVKFL+
Sbjct: 193 KTCTRASRGGATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQ 252
Query: 218 KQVHTL 223
Q+ L
Sbjct: 253 LQIKLL 258
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 82 SSLPLFINTTTP--VQEPMTPPLHQPNNVVTGG-----RLKTSLPSPSPYPPTLEKRNSM 134
S LPLF + + P +E M PNN TGG + P + SM
Sbjct: 92 SPLPLFTDRSPPPSAREDMDGGFKSPNNNATGGDHAMFNGFGAHGGAGAVQPPFGQGGSM 151
Query: 135 AAMREMIFRIAAMQPIHIDPES----IKPPKRRNVKISK----DPQSVAARHRREMISER 186
+ F A P S PP++ V+ + DP S+A R RRE I+ER
Sbjct: 152 SGQS---FGGTAASGGTAAPASSGGGAAPPRQTRVRARRGQATDPHSIAERLRRERIAER 208
Query: 187 IRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 209 MKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 245
>gi|357492173|ref|XP_003616375.1| Transcription factor bHLH83 [Medicago truncatula]
gi|355517710|gb|AES99333.1| Transcription factor bHLH83 [Medicago truncatula]
Length = 325
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 26/127 (20%)
Query: 124 YPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKI--SKDPQSVAARHRRE 181
+ L+KR+SM MQP + K+ K SKDPQSVAA++RRE
Sbjct: 188 HESVLKKRSSMGG---------NMQPTNAKKPCTAASKKEKHKSNPSKDPQSVAAKNRRE 238
Query: 182 MISERIRILQRIVPGGTK--------------MDTASMLDEAIHYVKFLKKQVHTLEQAG 227
ISER++ILQ +VP G+K +D +ML++AI YVKFL+ QV L A
Sbjct: 239 RISERLKILQELVPNGSKVDFQISPQSYVAFFVDLVTMLEKAISYVKFLQLQVKVL-AAD 297
Query: 228 AHRPMGG 234
P+ G
Sbjct: 298 EFWPVNG 304
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
D QS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YVKFL+ Q+ L
Sbjct: 205 DAQSIYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 258
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S K R + + +PQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA YVKF
Sbjct: 189 SKKTCARASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKF 248
Query: 216 LKKQVHTL 223
L+ Q+ L
Sbjct: 249 LQLQIKLL 256
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 46/56 (82%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+KD QS+AA++RRE ISER+++LQ +VP G+K+D +ML++AI YVKFL+ QV L
Sbjct: 238 AKDLQSIAAKNRRERISERLKVLQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 293
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 46/56 (82%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+KDPQSVAA+ RRE I+E++++LQ +VP GTK+D +ML++AI YVKFL+ QV L
Sbjct: 235 TKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKFLQLQVKVL 290
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R+ + DPQS+AAR RRE IS+R++ILQ +VP G+K+D +ML++AI+YVKF+
Sbjct: 231 LKPRSRQGT--ANDPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAINYVKFM 288
Query: 217 KKQVH 221
+ Q+
Sbjct: 289 QLQLQ 293
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 46/56 (82%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+KDPQSVAA+ RRE I+E++++LQ +VP GTK+D +ML++AI YVKFL+ QV L
Sbjct: 201 TKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKFLQLQVKVL 256
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 95 QEPMTPPLH-QPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHID 153
Q M P H PN+ + G SLP P + + A A QP
Sbjct: 126 QITMIPLSHNHPNDALFNGFSTGSLPFHLPQGSGGQTQTQSQATASATTGGATAQP---- 181
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
KP R + DP S+A R RRE I+ER++ LQ +VP G K D ASMLDE I YV
Sbjct: 182 --QTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYV 239
Query: 214 KFLKKQVHTL 223
KFL+ QV L
Sbjct: 240 KFLQLQVKVL 249
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 105 PNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRN 164
PN+ + G SLP P + + A A QP KP R
Sbjct: 80 PNDALFNGFSTGSLPFHLPQGSGGQTQTQSQATASATTGGATAQP------QTKPKVRAR 133
Query: 165 VKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ DP S+A R RRE I+ER++ LQ +VP G K D ASMLDE I YVKFL+ QV L
Sbjct: 134 RGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 192
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 95 QEPMTPPLH-QPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHID 153
Q M P H PN+ + G SLP P + + A A QP
Sbjct: 69 QITMIPLSHNHPNDALFNGFSTGSLPFHLPQGSGGQTQTQSQATASATTGGATAQP---- 124
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
KP R + DP S+A R RRE I+ER++ LQ +VP G K D ASMLDE I YV
Sbjct: 125 --QTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYV 182
Query: 214 KFLKKQVHTL 223
KFL+ QV L
Sbjct: 183 KFLQLQVKVL 192
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R+ + DPQS+AAR RRE IS+R++ILQ +VP G+K+D +ML++AI+YVKF+
Sbjct: 231 LKPRSRQGT--ANDPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAINYVKFM 288
Query: 217 KKQVH 221
+ Q+
Sbjct: 289 QLQLQ 293
>gi|315175249|gb|ADT82843.1| barren stalk1/lax panicle1 [Pharus latifolius]
Length = 141
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 179 RREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG--AHRPMGGVG 236
RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK QV +L QA H G
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-SLHQAALMQHEEASGHV 60
Query: 237 FQGAPMAGVAYPSLVK 252
F GA A A +V+
Sbjct: 61 FSGAASATSANDEVVQ 76
>gi|413920361|gb|AFW60293.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 15/136 (11%)
Query: 91 TTPVQEPMT--PPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQ 148
+T + P T P + + N++ + T+ P + K S E A +
Sbjct: 106 STDAKRPCTVPPWVSRKNSIAPADEINTTEP--------VNKSCSWCCSSEDDSAGACEE 157
Query: 149 PIHI-DPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLD 207
PI + S + P R SKD QS+ A+ RRE I+E++R LQ+++P GTK+D ++ML+
Sbjct: 158 PIVLKQSTSSRGPSRS----SKDSQSLYAKRRRERINEKLRTLQQLIPNGTKVDMSTMLE 213
Query: 208 EAIHYVKFLKKQVHTL 223
EA+ YVKFL+ Q+ L
Sbjct: 214 EAVQYVKFLQLQIKLL 229
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S +P R + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKF
Sbjct: 131 SARPRVRARRGQATDPHSIAERLRREKIAERMKALQELVPNANKTDKASMLDEIIDYVKF 190
Query: 216 LKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYPSLVKASHQMVDN 260
L+ QV L + +GG G AP+ VA L A ++V +
Sbjct: 191 LQLQVKVLSMS----RLGGAGATMAPL--VADLPLEGAGQELVSS 229
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 156 SIKPPKRRNVKISK----DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIH 211
++ P R V+ + DP S+A R RRE I+ER++ LQ +VP G K D ASMLDE I
Sbjct: 129 AVPPQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIID 188
Query: 212 YVKFLKKQVHTL----------------EQAGAHRPMGGVGFQGAPMAGVAYPSLVKASH 255
YVKFL+ QV L E G+H G+ AG + S+ H
Sbjct: 189 YVKFLQLQVKVLSMSRLGGAASVSSQLSEAGGSHGNASSAMAGGSQTAGNSNDSITMTEH 248
Query: 256 QMV 258
Q+
Sbjct: 249 QVA 251
>gi|242069235|ref|XP_002449894.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
gi|241935737|gb|EES08882.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
Length = 242
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 169 KDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL--EQA 226
KD QS+ A+ RRE I+ER+R LQ+++P GTK+D ++ML+EA+ YVKFL+ Q+ L E
Sbjct: 159 KDLQSLYAKRRRERINERLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLLSSEDT 218
Query: 227 GAHRPMG 233
+ P+
Sbjct: 219 WMYAPLA 225
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+ ++ML+EA+ YVKFL+ Q+ L
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVHISTMLEEAVQYVKFLQLQIKLL 299
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 45/70 (64%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P SI+P R + DP S+A R RRE ISERI+ LQ +VP K D A+MLDE + YV
Sbjct: 134 PPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYV 193
Query: 214 KFLKKQVHTL 223
KFL+ QV L
Sbjct: 194 KFLRLQVKVL 203
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
Query: 159 PPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHY 212
PP+ R KI + DP S+A R RRE I+ER++ LQ +VP G K D ASMLDE I Y
Sbjct: 131 PPQSR-TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDY 189
Query: 213 VKFLKKQVHTL----------------EQAGAHRPMGGVGFQGAPMAGVAYPSLVKASHQ 256
VKFL+ QV L E G+H G+ AG + S+ HQ
Sbjct: 190 VKFLQLQVKVLSMSRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQ 249
Query: 257 MV 258
+
Sbjct: 250 VA 251
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 45/70 (64%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P SI+P R + DP S+A R RRE ISERI+ LQ +VP K D A+MLDE + YV
Sbjct: 135 PPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYV 194
Query: 214 KFLKKQVHTL 223
KFL+ QV L
Sbjct: 195 KFLRLQVKVL 204
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 45/73 (61%)
Query: 151 HIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAI 210
H + S KP R + DP S+A R RRE ISER++ LQ +VP K D +SMLDE I
Sbjct: 311 HGNSVSAKPRSRARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKADKSSMLDEII 370
Query: 211 HYVKFLKKQVHTL 223
YVKFL+ QV L
Sbjct: 371 DYVKFLQLQVKVL 383
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
Query: 159 PPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHY 212
PP+ R KI + DP S+A R RRE I+ER++ LQ +VP G K D ASMLDE I Y
Sbjct: 131 PPQSR-TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDY 189
Query: 213 VKFLKKQVHTL----------------EQAGAHRPMGGVGFQGAPMAGVAYPSLVKASHQ 256
VKFL+ QV L E G+H G+ AG + S+ HQ
Sbjct: 190 VKFLQLQVKVLSMSRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQ 249
Query: 257 MV 258
+
Sbjct: 250 VA 251
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP +R + DPQS+ AR RRE I+ER+R LQ +VP G K+D +ML+EAI+YVKFL+
Sbjct: 236 KPRAKRGS--ATDPQSIYARQRRERINERLRALQGLVPNGAKVDIVTMLEEAINYVKFLQ 293
Query: 218 KQVHTLEQAGAHRPMGGVG 236
Q+ + ++ + P G
Sbjct: 294 LQLLSSDEYWMYAPTNYNG 312
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 41/50 (82%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQ 219
DPQS+ AR RRE I +R+RILQ +VP GTK+D ++ML+EA+ YVKFL+ Q
Sbjct: 249 DPQSLYARKRRERIDDRLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 298
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 43/66 (65%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE I+ER++ LQ +VP G K D ASMLDE I YVKFL+
Sbjct: 125 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 184
Query: 218 KQVHTL 223
QV L
Sbjct: 185 LQVKVL 190
>gi|357151466|ref|XP_003575800.1| PREDICTED: putative transcription factor bHLH086-like [Brachypodium
distachyon]
Length = 256
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 46/56 (82%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
SK+ QS+ A+ RRE I+E++R+LQ+++P GTK+D ++ML+EA+ YVKFL+ Q+ L
Sbjct: 170 SKNMQSLYAKKRRERINEKLRVLQQLIPNGTKVDISTMLEEAVQYVKFLQLQIKVL 225
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P +I+P R + DP S+A R RRE I+ER++ LQ +VP K D A+MLDE + YV
Sbjct: 162 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYV 221
Query: 214 KFLKKQVHTLEQAGAHRPMGGVG 236
KFL+ QV L + +GG G
Sbjct: 222 KFLRLQVKVLSMS----RLGGAG 240
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 43/68 (63%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S KP R + DP S+A R RRE ISER++ LQ +VP K D +SMLDE I YVKF
Sbjct: 314 SAKPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKF 373
Query: 216 LKKQVHTL 223
L+ QV L
Sbjct: 374 LQLQVKVL 381
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ QS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YVKFL+ Q+ L
Sbjct: 219 ESQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLL 272
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+ R N + DPQS+ A+ RRE I+ R+R LQ +VP GTK+D ++ML+EA+ YVKFL
Sbjct: 200 LNAKTRSNRWPATDPQSLYAKQRRERINARLRTLQNLVPNGTKVDISTMLEEAVRYVKFL 259
Query: 217 KKQVHTL 223
+ Q+ L
Sbjct: 260 QLQIKLL 266
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 43/68 (63%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S KP R + DP S+A R RRE ISER++ LQ +VP K D +SMLDE I YVKF
Sbjct: 315 SAKPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKF 374
Query: 216 LKKQVHTL 223
L+ QV L
Sbjct: 375 LQLQVKVL 382
>gi|357127136|ref|XP_003565241.1| PREDICTED: transcription factor bHLH113-like [Brachypodium
distachyon]
Length = 257
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS A+ RRE ISER+++LQ +VP GTK+D +ML++AI YVKFL+ QV L
Sbjct: 171 DPQSAVAKVRRERISERLKVLQDLVPNGTKVDMVTMLEKAITYVKFLQLQVKVL 224
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
PQS AA+ RRE ISER+++LQ +VP GTK+D +ML++AI+YVKFL+ QV L
Sbjct: 208 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVL 260
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
PQS AA+ RRE ISER+++LQ +VP GTK+D +ML++AI+YVKFL+ QV L
Sbjct: 209 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVL 261
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
PQS AA+ RRE ISER+++LQ +VP GTK+D +ML++AI+YVKFL+ QV L
Sbjct: 202 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVL 254
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P +I+P R + DP S+A R RRE I+ER++ LQ +VP K D A+MLDE + YV
Sbjct: 92 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYV 151
Query: 214 KFLKKQVHTLEQAGAHRPMGGVG 236
KFL+ QV L + +GG G
Sbjct: 152 KFLRLQVKVLSMS----RLGGAG 170
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 42/66 (63%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE ISER++ LQ +VP K D ASMLDE I YVKFL+
Sbjct: 312 KPRTRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 371
Query: 218 KQVHTL 223
QV L
Sbjct: 372 LQVKVL 377
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R + DP S+A R RRE IS+R++ LQ +VP K D ASMLDE I YVKFL
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKADKASMLDEIIDYVKFL 375
Query: 217 KKQVHTLEQAGAHRPMGGV----------GFQGAPMA 243
+ QV L + P G V G+ G P++
Sbjct: 376 QLQVKVLSMSRLGAP-GAVLPLLTESQTEGYHGQPLS 411
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YV+FL+
Sbjct: 96 KPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQ 155
Query: 218 KQVHTLEQAGAHRPMGGVGFQGAPMAGVA 246
QV L + +GG G G + G++
Sbjct: 156 LQVKVLSMS----RLGGAGAVGPRLNGLS 180
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YV+FL+
Sbjct: 96 KPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQ 155
Query: 218 KQVHTLEQAGAHRPMGGVGFQGAPMAGVA 246
QV L + +GG G G + G++
Sbjct: 156 LQVKVLSMS----RLGGAGSVGPRLNGLS 180
>gi|357150524|ref|XP_003575488.1| PREDICTED: transcription factor bHLH84-like [Brachypodium
distachyon]
Length = 178
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 3/65 (4%)
Query: 162 RRNVKIS---KDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKK 218
R+N K S KD QS A+ RR+ I+ER+RILQ+++P GTK+D ++ML+EA+ YVKFL
Sbjct: 93 RKNGKKSRAAKDSQSHYAKKRRQRINERLRILQKLIPNGTKVDISTMLEEAVQYVKFLHL 152
Query: 219 QVHTL 223
Q+ L
Sbjct: 153 QIKLL 157
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
Query: 159 PPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHY 212
PP+ R KI + DP S+A R RRE I+ER++ LQ +VP G K D ASMLDE I Y
Sbjct: 131 PPQSR-TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDY 189
Query: 213 VKFLKKQVHTL----------------EQAGAHRPMGGVGFQGAPMAGVAYPSLVKASHQ 256
V+FL+ QV L E G+H G+ AG + S+ HQ
Sbjct: 190 VEFLQLQVKVLSMSRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQ 249
Query: 257 MV 258
+
Sbjct: 250 VA 251
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R + DP S+A R RRE IS+R++ LQ +VP K D ASMLDE I YVKFL
Sbjct: 313 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFL 372
Query: 217 KKQVHTLEQAGAHRPMGGV----------GFQGAPM 242
+ QV L + P G V G+ G P+
Sbjct: 373 QLQVKVLSMSRVGAP-GAVLPLLTESKTEGYHGQPL 407
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R + DP S+A R RRE IS+R++ LQ +VP K D ASMLDE I YVKFL
Sbjct: 278 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFL 337
Query: 217 KKQVHTLEQAGAHRPMGGV----------GFQGAPM 242
+ QV L + P G V G+ G P+
Sbjct: 338 QLQVKVLSMSRVGAP-GAVLPLLTESKTEGYHGQPL 372
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE I+ER++ LQ +VP +K+D ASMLDE I YVKFL+
Sbjct: 348 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQ 407
Query: 218 KQVHTL 223
QV L
Sbjct: 408 LQVKVL 413
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 52/94 (55%), Gaps = 13/94 (13%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
+P R + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+
Sbjct: 29 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQ 88
Query: 218 KQVHTLEQAGAHRPMGGVGFQGAPMAGVAYPSLV 251
QV L + +GG G A PSLV
Sbjct: 89 LQVKVLSMS----RLGGAG---------ALPSLV 109
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 42/66 (63%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE ISER++ LQ +VP K D ASMLDE I YVKFL+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 218 KQVHTL 223
QV L
Sbjct: 373 LQVKVL 378
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P +I+P R + DP S+A R RRE I+ER++ LQ +VP K D A+MLDE + YV
Sbjct: 144 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYV 203
Query: 214 KFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYPSL 250
KFL+ QV L + +GG G +A + P++
Sbjct: 204 KFLRLQVKVLSMS----RLGGAGAVAQLVADIPLPAV 236
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 42/66 (63%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE ISER++ LQ +VP K D ASMLDE I YVKFL+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 218 KQVHTL 223
QV L
Sbjct: 373 LQVKVL 378
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 42/66 (63%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE ISER++ LQ +VP K D ASMLDE I YVKFL+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 218 KQVHTL 223
QV L
Sbjct: 373 LQVKVL 378
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
PQS AA+ RRE ISER+++LQ +VP GTK+D +ML++AI+YVKFL+ QV L
Sbjct: 224 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVL 276
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P I+P R + DP S+A R RRE I+ER+R LQ +VP K D A+MLDE + YV
Sbjct: 173 PPGIRPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKSDRAAMLDEIVDYV 232
Query: 214 KFLKKQVHTLEQAGAHRPMGGVG 236
KFL+ QV L + +GG G
Sbjct: 233 KFLRLQVKVLSMS----RLGGAG 251
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P +I+P R + DP S+A R RRE I+ER++ LQ +VP K D A+MLDE + YV
Sbjct: 168 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYV 227
Query: 214 KFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYPSL 250
KFL+ QV L + +GG G +A + P++
Sbjct: 228 KFLRLQVKVLSMS----RLGGAGAVAQLVADIPLPAV 260
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
+ DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L +
Sbjct: 203 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSMS- 261
Query: 228 AHRPMGGVG 236
+GG G
Sbjct: 262 ---RLGGAG 267
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
+ DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L +
Sbjct: 206 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSMS- 264
Query: 228 AHRPMGGVG 236
+GG G
Sbjct: 265 ---RLGGAG 270
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Query: 159 PPKRRNVKISK----DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVK 214
PP+++ V+ + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVK
Sbjct: 198 PPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVK 257
Query: 215 FLKKQVHTL 223
FL+ QV L
Sbjct: 258 FLQLQVKVL 266
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Query: 159 PPKRRNVKISK----DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVK 214
PP+++ V+ + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVK
Sbjct: 198 PPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVK 257
Query: 215 FLKKQVHTL 223
FL+ QV L
Sbjct: 258 FLQLQVKVL 266
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 42/66 (63%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+
Sbjct: 171 KPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 230
Query: 218 KQVHTL 223
QV L
Sbjct: 231 LQVKVL 236
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 42/66 (63%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE ISER++ LQ +VP K D ASMLDE I YVKFL+
Sbjct: 236 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 295
Query: 218 KQVHTL 223
QV L
Sbjct: 296 LQVKVL 301
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 43/67 (64%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R + DP S+A R RRE IS+R++ LQ +VP K D ASMLDE I YVKFL
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFL 375
Query: 217 KKQVHTL 223
+ QV L
Sbjct: 376 QLQVKVL 382
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 161 KRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
+R + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV
Sbjct: 188 QRAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQV 247
Query: 221 HTLEQAGAHRPMGGVGFQGAPMAGVA 246
L + +GG G +AG+A
Sbjct: 248 KVLSMS----RLGGATAVGTLVAGIA 269
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 43/67 (64%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R + DP S+A R RRE IS+R++ LQ +VP K D ASMLDE I YVKFL
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFL 375
Query: 217 KKQVHTL 223
+ QV L
Sbjct: 376 QLQVKVL 382
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 145 AAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTAS 204
AM P P + +P +R + DP S+A R RRE I+ER+R LQ +VP K D A+
Sbjct: 110 GAMVPQPHQPPAPRPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAA 169
Query: 205 MLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVG 236
MLDE + YVKFL+ QV L + +GG G
Sbjct: 170 MLDEILDYVKFLRLQVKVLSMSR----LGGAG 197
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P +I+P R + DP S+A R RRE I+ER++ LQ +VP K D A+M+DE + YV
Sbjct: 156 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKTDRAAMIDEIVDYV 215
Query: 214 KFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYPSLVKASHQMVDN 260
KFL+ QV L M +G GA VA L + +D
Sbjct: 216 KFLRLQVKVLS-------MSRLGAAGAVAQLVADVPLASVEGESIDG 255
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Query: 160 PKRRNVKISK----DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
PK++ V+ + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKF
Sbjct: 242 PKQQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKF 301
Query: 216 LKKQVHTL 223
L+ QV L
Sbjct: 302 LQLQVKVL 309
>gi|224061589|ref|XP_002300555.1| predicted protein [Populus trichocarpa]
gi|222847813|gb|EEE85360.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 33 EAFNNNISPLPHEIHFSNANTNSNISTQPIYHNPNNYVSSPPPTFTNPSSSLPLFINTTT 92
++F N + + ++ +S++ TN P + +P++ SS P +S L F +
Sbjct: 47 DSFINPLYDVEDQLFYSDSYTN----LLPFFSSPSDNTSSLSPE----TSPLEDFESYAC 98
Query: 93 PVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHI 152
P ++ + N + +P+P+P PP E + I + P
Sbjct: 99 PKRQKLYT--DHFNTKFATSFFEGYVPNPNPGPP------------EFLPEIPVLDPKFQ 144
Query: 153 DP--------ESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTAS 204
P ES+ K+ + +S QS+AAR RR I+E+ + L +++PGG KM+TA
Sbjct: 145 VPTNFNVGRTESLMDSKKPSTGVSLSAQSIAARERRRKITEKTQQLGKLIPGGNKMNTAE 204
Query: 205 MLDEAIHYVKFLKKQVHTLEQAGA 228
M A YVKFL+ Q+ LE G
Sbjct: 205 MFQAASKYVKFLQAQIGILELTGT 228
>gi|125555439|gb|EAZ01045.1| hypothetical protein OsI_23077 [Oryza sativa Indica Group]
Length = 294
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 169 KDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
K+ QS AA+ RRE ISER+R LQ +VP G K+D +MLD AI YVKF++ Q+ LE
Sbjct: 197 KETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVLE 252
>gi|52077404|dbj|BAD46515.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|125597317|gb|EAZ37097.1| hypothetical protein OsJ_21438 [Oryza sativa Japonica Group]
Length = 294
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 169 KDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
K+ QS AA+ RRE ISER+R LQ +VP G K+D +MLD AI YVKF++ Q+ LE
Sbjct: 197 KETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVLE 252
>gi|168029799|ref|XP_001767412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681308|gb|EDQ67736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 159 PPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKK 218
P +RR + DPQS+AAR RRE ++RIRILQ +VP G ++DT ML + YV+FL+
Sbjct: 673 PKQRRRHGTATDPQSIAARTRREKFTDRIRILQSLVPNGERLDTVHMLSQTFEYVRFLQH 732
Query: 219 QVHTL 223
+V L
Sbjct: 733 KVWDL 737
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P ++P R + DP S+A R RRE I+ER++ LQ +VP K D A+MLDE + YV
Sbjct: 51 PPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYV 110
Query: 214 KFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYPSL 250
KFL+ QV L + +GG G +A V S+
Sbjct: 111 KFLRLQVKVLSMS----RLGGAGAVAQLVADVPLSSV 143
>gi|357128639|ref|XP_003565978.1| PREDICTED: uncharacterized protein LOC100831424 [Brachypodium
distachyon]
Length = 299
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGG--TKMDTASMLDEAIHYVKFLKKQVHTLE 224
+PQ+VAAR RRE +SER+R L+R+VPGG KMDTASML +A Y+ FLK Q+ +
Sbjct: 181 EPQTVAARLRREKVSERLRALRRLVPGGGSGKMDTASMLHQAACYLSFLKAQLARFQ 237
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 42/66 (63%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+
Sbjct: 293 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQ 352
Query: 218 KQVHTL 223
QV L
Sbjct: 353 LQVKVL 358
>gi|315175241|gb|ADT82839.1| barren stalk1/lax panicle1 [Chasmanthium latifolium]
Length = 151
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 179 RREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQ 238
RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK Q+ + A G
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKGQISLHQAALMQHEEGCQAEL 61
Query: 239 GAPMAGVA 246
AP++ VA
Sbjct: 62 AAPLSAVA 69
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R+ + DPQS+AAR RRE ISER+++LQ ++P G K+D +ML++AI YV+ L
Sbjct: 637 LKPRARQGS--ANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCL 694
Query: 217 KKQVHTLE 224
+ Q+ L+
Sbjct: 695 EFQIKMLK 702
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 232 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 287
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
+P R + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+
Sbjct: 28 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQ 87
Query: 218 KQVHTLEQAGAHRPMGGVG 236
QV L + +GG G
Sbjct: 88 LQVKVLSMS----RLGGAG 102
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE----- 224
DP S+A R RRE I+ER++ LQ +VP K+D ASMLDE I YVKFL+ QV L
Sbjct: 249 DPHSIAERLRREKIAERMKNLQELVPNSNKVDKASMLDEIIEYVKFLQLQVKVLSMSRLG 308
Query: 225 QAGAHRPM 232
AGA P+
Sbjct: 309 AAGAVIPL 316
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 260 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 315
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 38/54 (70%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 206 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 259
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P ++P R + DP S+A R RRE I+ER++ LQ +VP K D A+MLDE + YV
Sbjct: 150 PPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYV 209
Query: 214 KFLKKQVHTLEQAGAHRPMGGVG 236
KFL+ QV L + +GG G
Sbjct: 210 KFLRLQVKVLSMS----RLGGAG 228
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P I+P R + DP S+A R RRE I+ER++ LQ +VP K D A+MLDE + YV
Sbjct: 159 PPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYV 218
Query: 214 KFLKKQVHTLEQAGAHRPMGGVG 236
KFL+ QV L + +GG G
Sbjct: 219 KFLRLQVKVLSMS----RLGGAG 237
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 224 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 279
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R+ + DPQS+AAR RRE ISER+++LQ ++P G K+D +ML++AI YV+ L
Sbjct: 752 LKPRARQGS--ANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCL 809
Query: 217 KKQVHTLE 224
+ Q+ L+
Sbjct: 810 ELQIKMLK 817
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 42/66 (63%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+
Sbjct: 146 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQ 205
Query: 218 KQVHTL 223
QV L
Sbjct: 206 LQVKVL 211
>gi|346682821|gb|AEO45564.1| abscisic acid-responsive protein bHLH2 [Populus koreana]
Length = 297
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 155 ESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVK 214
ES+ K+ + +S QS+AAR RR I+E+ + L +++PGG KM+TA M A YVK
Sbjct: 154 ESLMDSKKPSTGVSLSAQSIAARERRRKITEKTQQLGKLIPGGNKMNTAEMFQAASKYVK 213
Query: 215 FLKKQVHTLEQAGA 228
FL+ Q+ LE G
Sbjct: 214 FLQAQIGILELTGT 227
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 263 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 318
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 38/54 (70%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 213 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 266
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 43/56 (76%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ QS A++RR+ I+ER+RILQ ++P GTK+D ++ML+EAI YVKFL Q+ L
Sbjct: 115 AESSQSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLL 170
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R+ + DPQS+AAR RRE ISER+++LQ ++P G K+D +ML++AI YV+ L
Sbjct: 820 LKPRARQGS--ANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCL 877
Query: 217 KKQVHTLE 224
+ Q+ L+
Sbjct: 878 EFQIKMLK 885
>gi|168057236|ref|XP_001780622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667988|gb|EDQ54605.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 835
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 159 PPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKK 218
P +RR + DPQS+AAR RRE ++RIRILQ +VP G ++DT ML + YV+FL+
Sbjct: 672 PKQRRRHGTATDPQSIAARTRREKFTDRIRILQGLVPNGERLDTVHMLSQTFEYVRFLQH 731
Query: 219 QVHTL 223
+V L
Sbjct: 732 KVWDL 736
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P I+P R + DP S+A R RRE I+ER++ LQ +VP K D A+MLDE + YV
Sbjct: 162 PPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYV 221
Query: 214 KFLKKQVHTLEQAGAHRPMGGVG 236
KFL+ QV L + +GG G
Sbjct: 222 KFLRLQVKVLSMS----RLGGAG 240
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 38/54 (70%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 46 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 99
>gi|315175251|gb|ADT82844.1| barren stalk1/lax panicle1 [Miscanthus sinensis]
Length = 162
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 179 RREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK Q+ +L QA
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQI-SLHQA 48
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 38/54 (70%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 113 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 166
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
+ DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L +
Sbjct: 151 ATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQVQVKVLSMS- 209
Query: 228 AHRPMGGVG 236
+GG G
Sbjct: 210 ---RLGGAG 215
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 171 ATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQLQVKVL 226
>gi|315175247|gb|ADT82842.1| barren stalk1/lax panicle1 [Streptochaeta angustifolia]
Length = 125
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 179 RREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK Q+ +L QA
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQI-SLHQA 48
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P + +P R + DP S+A R RRE I+ER+R LQ +VP K D A+MLDE + YV
Sbjct: 108 PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYV 167
Query: 214 KFLKKQVHTLEQAGAHRPMGGVG 236
KFL+ QV L + +GG G
Sbjct: 168 KFLRLQVKVLSMSR----LGGAG 186
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 268 DPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL------ 321
Query: 230 RPMGGVGFQGAPM 242
M +G GA M
Sbjct: 322 -SMSRLGNAGAVM 333
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 268 DPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL------ 321
Query: 230 RPMGGVGFQGAPM 242
M +G GA M
Sbjct: 322 -SMSRLGNAGAVM 333
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
+ DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV ++ + G
Sbjct: 257 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVLSMSRLG 316
Query: 228 A 228
Sbjct: 317 G 317
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 42/66 (63%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE IS+R++ LQ +VP + D ASMLDE I YVKFL+
Sbjct: 295 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQ 354
Query: 218 KQVHTL 223
QV L
Sbjct: 355 LQVKVL 360
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 37 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQLQVKVL 92
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 161 KRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
+R + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV
Sbjct: 195 QRAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQV 254
Query: 221 HTL 223
L
Sbjct: 255 KVL 257
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
+P R + DP S+A R RRE I+ER+R LQ +VP K D A+MLDE + YVKFL+
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 218 KQVHTLEQAGAHRPMGGVG 236
QV L + +GG G
Sbjct: 190 LQVKVLSMS----RLGGAG 204
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P + +P R + DP S+A R RRE I+ER+R LQ +VP K D A+MLDE + YV
Sbjct: 109 PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYV 168
Query: 214 KFLKKQVHTLEQAGAHRPMGGVG 236
KFL+ QV L + +GG G
Sbjct: 169 KFLRLQVKVLSMSR----LGGAG 187
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R+ + DPQS+AAR RRE ISER+++LQ ++P G K+D +ML++AI YV+ L
Sbjct: 46 LKPRARQGS--ANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCL 103
Query: 217 KKQVHTLE 224
+ Q+ L+
Sbjct: 104 ELQIKMLK 111
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 67/136 (49%), Gaps = 16/136 (11%)
Query: 111 GGRLKTSLPSPSPYPPTLEKRNSMAAMR----EMIFRIAAMQP------IHIDPESIKPP 160
GG+ + ++ P +PP +R +FR A QP + P + +P
Sbjct: 64 GGKDREAVQLPGLFPPVFSGGVQPPHLRPNPPTQVFR--AQQPKQGGAGVGPQPPAPRPK 121
Query: 161 KRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
R + DP S+A R RRE I+ER+R LQ +VP K D A MLDE + YVKFL+ QV
Sbjct: 122 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAVMLDEILDYVKFLRLQV 181
Query: 221 HTLEQAGAHRPMGGVG 236
L + +GG G
Sbjct: 182 KVLSMS----RLGGAG 193
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
+P R + DP S+A R RRE I+ER+R LQ +VP K D A+MLDE + YVKFL+
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 218 KQVHTLEQAGAHRPMGGVG 236
QV L + +GG G
Sbjct: 190 LQVKVLSMS----RLGGAG 204
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
+ DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV ++ + G
Sbjct: 246 ATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVLSMSRLG 305
Query: 228 A 228
Sbjct: 306 G 306
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 43/67 (64%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
+KP R + DP S+A R RRE IS+R++ LQ +VP K D ASMLDE I +VKFL
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDHVKFL 375
Query: 217 KKQVHTL 223
+ QV L
Sbjct: 376 QLQVKVL 382
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 13/67 (19%)
Query: 170 DPQSVAAR-------------HRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YVKFL
Sbjct: 246 DPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFL 305
Query: 217 KKQVHTL 223
+ Q+ L
Sbjct: 306 QLQIKLL 312
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 160 PKRRNVKISK----DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
P R+ V+ + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE + YVKF
Sbjct: 235 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKF 294
Query: 216 LKKQVHTL 223
L+ QV L
Sbjct: 295 LQLQVKVL 302
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 160 PKRRNVKISK----DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
P R+ V+ + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE + YVKF
Sbjct: 234 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKF 293
Query: 216 LKKQVHTL 223
L+ QV L
Sbjct: 294 LQLQVKVL 301
>gi|224117892|ref|XP_002317694.1| predicted protein [Populus trichocarpa]
gi|222860759|gb|EEE98306.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 155 ESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVK 214
+S+ K+ + +S QS+AAR RR I+E+ R L + +PGG KM+TA M A YVK
Sbjct: 156 QSVMNSKKPSTGVSLSTQSIAARERRRKITEKTRELGKFIPGGHKMNTAEMFQAASKYVK 215
Query: 215 FLKKQVHTLEQAGAHRPMGG 234
FL+ Q+ LE G+ + G
Sbjct: 216 FLQAQIGILELMGSTQENKG 235
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P + +P R + DP S+A R RRE I+ER+R LQ +VP K D A+MLDE + YV
Sbjct: 117 PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYV 176
Query: 214 KFLKKQVHTLEQAGAHRPMGGVG 236
KFL+ QV L + +GG G
Sbjct: 177 KFLRLQVKVLSMS----RLGGAG 195
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
+P R + DP S+A R RRE I+ER+R LQ +VP K D A+MLDE + YVKFL+
Sbjct: 21 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 80
Query: 218 KQVHTLEQAGAHRPMGGVG 236
QV L + +GG G
Sbjct: 81 LQVKVLSMS----RLGGAG 95
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
+P R + DP S+A R RRE I+ER+R LQ +VP K D A+MLDE + YVKFL+
Sbjct: 129 RPKVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR 188
Query: 218 KQVHTLEQAGAHRPMGGVG 236
QV L + +GG G
Sbjct: 189 LQVKVLSMS----RLGGAG 203
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
+P R + DP S+A R RRE I+ER+R LQ +VP K D A+MLDE + YVKFL+
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 218 KQVHTL 223
QV L
Sbjct: 190 LQVKVL 195
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 38/54 (70%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 222 DPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 275
>gi|125596454|gb|EAZ36234.1| hypothetical protein OsJ_20554 [Oryza sativa Japonica Group]
Length = 189
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 38/43 (88%)
Query: 167 ISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEA 209
+S +PQSVAAR RRE +S+R+R LQR+VPGG ++DTASML+EA
Sbjct: 120 VSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEA 162
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 157 IKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
++ +R + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YV+FL
Sbjct: 190 LRQRQRAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVRFL 249
Query: 217 KKQVHTLEQAGAHRPMGGV 235
+ QV L + GG+
Sbjct: 250 QLQVKVLSMSRLGGAAGGM 268
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
+I P R + DP S+A R RRE ISERI+ LQ +VP K D A+++DE + YVKF
Sbjct: 129 AIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNKTDRAALVDEILDYVKF 188
Query: 216 LKKQVHTL 223
L+ QV L
Sbjct: 189 LRLQVKVL 196
>gi|225444197|ref|XP_002270265.1| PREDICTED: transcription factor bHLH52-like [Vitis vinifera]
Length = 283
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S++ ++ + S QS+AAR RR I+E+ + L +++PGG KM+TA M A YVK+
Sbjct: 145 SVESSGKKGCRESLSAQSIAARQRRRKITEKTQELGKLIPGGNKMNTAEMFQAAFKYVKY 204
Query: 216 LKKQVHTLEQAGA 228
L+ QV L+ G+
Sbjct: 205 LQAQVAILQLMGS 217
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 37/54 (68%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
P S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 270 PHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 323
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P I+P R + DP S+A R RR I+ER++ LQ +VP K D A+MLDE + YV
Sbjct: 13 PPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYV 72
Query: 214 KFLKKQVHTL 223
KFL+ QV L
Sbjct: 73 KFLRLQVKVL 82
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 42/66 (63%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE IS+R++ LQ +VP K + ASMLDE I YVKFL+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 218 KQVHTL 223
QV L
Sbjct: 371 LQVKVL 376
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 42/66 (63%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE IS+R++ LQ +VP K + ASMLDE I YVKFL+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 218 KQVHTL 223
QV L
Sbjct: 371 LQVKVL 376
>gi|296089224|emb|CBI38996.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S++ ++ + S QS+AAR RR I+E+ + L +++PGG KM+TA M A YVK+
Sbjct: 126 SVESSGKKGCRESLSAQSIAARQRRRKITEKTQELGKLIPGGNKMNTAEMFQAAFKYVKY 185
Query: 216 LKKQVHTLEQAGA 228
L+ QV L+ G+
Sbjct: 186 LQAQVAILQLMGS 198
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
+P R + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE + YVKFL+
Sbjct: 1 RPRVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQ 60
Query: 218 KQVHTL 223
QV L
Sbjct: 61 LQVKVL 66
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV
Sbjct: 168 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQV 218
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE IS+R++ LQ +VP + D ASMLDE I YVKFL+
Sbjct: 295 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQ 354
Query: 218 KQV 220
QV
Sbjct: 355 LQV 357
>gi|224081405|ref|XP_002306398.1| predicted protein [Populus trichocarpa]
gi|222855847|gb|EEE93394.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 168 SKDPQ-SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
SK P ++ R+RRE +S+R L +VPG KMD AS+L +AI Y+K+L+++V TLE+
Sbjct: 1 SKSPSHAIEERNRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKYLQERVKTLEEQ 60
Query: 227 GAHRPMGGVGFQGAPMAGVAYPS 249
A + M V F + +A S
Sbjct: 61 AAKKTMESVVFVKKSLVCIADDS 83
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 79/161 (49%), Gaps = 30/161 (18%)
Query: 107 NVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVK 166
N G RLKTS E R+S + ++ +P+ +P+S PPK+ +
Sbjct: 103 NDCDGKRLKTSGSRD-------ENRDSKTEVE-----TSSGKPVEQNPQSADPPKQDFIH 150
Query: 167 I------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQ 219
+ + D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 220 VH----TLEQAGAHRPMGGVGF-------QGAPMAGVAYPS 249
V LE + G GF Q AGVAY S
Sbjct: 211 VEFLSMKLEAVNSRMNSGIEGFPSKDFGQQTFDAAGVAYSS 251
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P I+P R + DP S+A R RR I+ER++ LQ +VP K D A+MLDE + YV
Sbjct: 9 PPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYV 68
Query: 214 KFLKKQVHTL 223
KFL+ Q+ L
Sbjct: 69 KFLRLQIKVL 78
>gi|125536776|gb|EAY83264.1| hypothetical protein OsI_38473 [Oryza sativa Indica Group]
Length = 198
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 176 ARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
A++RR+ I+ER+RILQ ++P GTK+D ++ML+EAI YVKFL Q+ L
Sbjct: 123 AKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLL 170
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 160 PKRRNVKISK----DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
P R+ V+ + DP S+A R RRE I+ER++ LQ +V K D ASMLDE I YVKF
Sbjct: 140 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKF 199
Query: 216 LKKQVHTLEQAGA 228
L+ QV ++ + G
Sbjct: 200 LQLQVLSMSRLGG 212
>gi|17027282|gb|AAL34136.1|AC090713_23 putative transcription factor [Oryza sativa Japonica Group]
gi|108711234|gb|ABF99029.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|125588017|gb|EAZ28681.1| hypothetical protein OsJ_12693 [Oryza sativa Japonica Group]
Length = 310
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 159 PPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKK 218
P +RR+ I+ QS+ AR RRE I+ R+RILQ++VP GTK+D ++ML+EA+HYVKFL+
Sbjct: 211 PARRRSATIA---QSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQL 267
Query: 219 QVHTLEQAGAHRPM 232
Q+ Q H M
Sbjct: 268 QIKVEVQIVCHDQM 281
>gi|255586237|ref|XP_002533773.1| DNA binding protein, putative [Ricinus communis]
gi|223526310|gb|EEF28618.1| DNA binding protein, putative [Ricinus communis]
Length = 288
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 39/53 (73%)
Query: 172 QSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
QS+AAR RR I+ER + L +++PGG KM+TA ML A +YVKFL+ QV LE
Sbjct: 166 QSIAARERRRKITERTQELGKLIPGGNKMNTAEMLQSASNYVKFLQAQVGILE 218
>gi|218193803|gb|EEC76230.1| hypothetical protein OsI_13645 [Oryza sativa Indica Group]
Length = 291
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 159 PPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKK 218
P +RR+ I+ QS+ AR RRE I+ R+RILQ++VP GTK+D ++ML+EA+HYVKFL+
Sbjct: 192 PARRRSATIA---QSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQL 248
Query: 219 QVHTLEQAGAHRPM 232
Q+ Q H M
Sbjct: 249 QIKVEVQIVCHDQM 262
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 160 PKRRNVKISK----DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
P R+ V+ + DP S+A R RRE I+ER++ LQ +V K D ASMLDE I YVKF
Sbjct: 112 PPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKF 171
Query: 216 LKKQVHTLEQAGA 228
L+ QV ++ + G
Sbjct: 172 LQLQVLSMSRLGG 184
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 79/161 (49%), Gaps = 30/161 (18%)
Query: 107 NVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVK 166
N G RLKTS E R+S + ++ +P+ +P+S PPK+ +
Sbjct: 34 NDCDGKRLKTSGSRD-------ENRDSKTEVE-----TSSGKPVEQNPQSADPPKQDFIH 81
Query: 167 I------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQ 219
+ + D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++Q
Sbjct: 82 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 141
Query: 220 VH----TLEQAGAHRPMGGVGF-------QGAPMAGVAYPS 249
V LE + G GF Q AGVAY S
Sbjct: 142 VEFLSMKLEAVNSRMNSGIEGFPSKDFGQQTFDAAGVAYSS 182
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 79/161 (49%), Gaps = 30/161 (18%)
Query: 107 NVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVK 166
N G RLKTS E R+S + ++ +P+ +P+S PPK+ +
Sbjct: 103 NDCDGKRLKTSGSRD-------ENRDSKTEVE-----TSSGKPVEQNPQSADPPKQDFIH 150
Query: 167 I------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQ 219
+ + D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 220 VH----TLEQAGAHRPMGGVGF-------QGAPMAGVAYPS 249
V LE + G GF Q AGVAY S
Sbjct: 211 VEFLSMKLEAVNSRMNSGIEGFPSKDFGQQTFDAAGVAYSS 251
>gi|358347412|ref|XP_003637751.1| LAX [Medicago truncatula]
gi|355503686|gb|AES84889.1| LAX [Medicago truncatula]
Length = 298
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Query: 157 IKPPKRRNVKISK-------DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEA 209
++PP KI K QS+AAR RR I+E+ + L ++VPGG KM+TA ML+ A
Sbjct: 146 VEPPFAATSKIEKKVTERTISSQSIAARERRRKITEKTQELGKLVPGGPKMNTAEMLNAA 205
Query: 210 IHYVKFLKKQVHTLE 224
+YVKFL+ QV L+
Sbjct: 206 ANYVKFLQAQVGMLQ 220
>gi|357444409|ref|XP_003592482.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481530|gb|AES62733.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 157
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 37/45 (82%)
Query: 179 RREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YVKFL+ Q+ L
Sbjct: 87 RRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 131
>gi|294460878|gb|ADE76012.1| unknown [Picea sitchensis]
Length = 171
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 41/51 (80%)
Query: 167 ISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
+S DPQS+AARHRR I +R +ILQ +VPGG MDT SMLDEAI YVKFL+
Sbjct: 37 LSMDPQSIAARHRRHKIRKRFKILQSMVPGGKNMDTVSMLDEAIQYVKFLQ 87
>gi|315175245|gb|ADT82841.1| barren stalk1/lax panicle1 [Joinvillea ascendens]
Length = 140
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 179 RREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG--AHRPMGGVG 236
RR IS+R R+L+ +VPGG+KMDT SML++AI YV+FLK Q+ L+Q H G G
Sbjct: 1 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIDYVQFLKAQIR-LQQTALMLHDQESGHG 59
Query: 237 F 237
F
Sbjct: 60 F 60
>gi|449493201|ref|XP_004159220.1| PREDICTED: uncharacterized protein LOC101232790 [Cucumis sativus]
Length = 312
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
P+S AR RR+ +S++ R LQ+++P KMD A+ML+EA YVKFL+ Q+ L+
Sbjct: 180 PRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ 233
>gi|255576033|ref|XP_002528912.1| DNA binding protein, putative [Ricinus communis]
gi|223531666|gb|EEF33492.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +S+R L +VPG KMD AS+L +AI Y+K L+++V TLE+ A + M
Sbjct: 181 IAERKRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKHLQERVKTLEEQAAKKTME 240
Query: 234 GVGF 237
V F
Sbjct: 241 SVVF 244
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ DP S+A R RRE IS+R++ LQ +VP K D ASML+E I Y+KFL+ Q L
Sbjct: 289 ATDPHSIAERLRREKISDRMKNLQELVPNSNKTDKASMLEEIIEYIKFLQLQTKVL 344
>gi|356495525|ref|XP_003516627.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 396
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE IS+R L I+PG KMD AS+L +A+ YVK L+++V TLE+ A R +G
Sbjct: 173 IAERKRRENISKRFIALSAILPGLKKMDKASVLGDAVKYVKQLQERVQTLEEQAAKRTLG 232
>gi|326501126|dbj|BAJ98794.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
+A R RRE +SER L +IVPG KMD AS+L +AI YVK L++QV +E+ RP+
Sbjct: 168 LAERKRREKLSERFIALSKIVPGLKKMDKASVLGDAIKYVKTLQEQVKGMEEVARRRPV 226
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKM---DTASMLDEAIHYVKFLKKQV 220
+ DP S+A R RRE I+ER++ LQ +VP K+ D ASMLDE I YVKFL+ QV
Sbjct: 257 ATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQV 312
>gi|356540613|ref|XP_003538782.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 349
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +S+R L I+PG KMD AS+L +AI YVK L+++V TLE+ A R G
Sbjct: 182 IAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIKYVKQLQERVQTLEEQAAKRTAG 241
Query: 234 G 234
Sbjct: 242 S 242
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 121 PSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDP---ESIKPPKRRNVKISKDPQSVAAR 177
P+ YPP L+ + + R +++ + +D ES+ R + P+S+A R
Sbjct: 151 PARYPPPLKGAQTGS------LRASSLIEMEMDKLLEESVPCKIRAKRGCATHPRSIAER 204
Query: 178 HRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQ 225
RR IS+RIR LQ +VP K +TA ML+EA+ YVKFL++Q+ L +
Sbjct: 205 VRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQIQELTE 253
>gi|302807648|ref|XP_002985518.1| hypothetical protein SELMODRAFT_451590 [Selaginella moellendorffii]
gi|300146724|gb|EFJ13392.1| hypothetical protein SELMODRAFT_451590 [Selaginella moellendorffii]
Length = 551
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 31/195 (15%)
Query: 41 PLPHEIHFSNANTNSNIS--TQPIYHNPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEP- 97
P H++ FS+ + NI+ TQ N++ P T PS ++ + P ++
Sbjct: 214 PWEHDVGFSDNQFSLNIAAPTQL------NFLGQPSKTGGQPSDHFDKQVDCSRPEKQGP 267
Query: 98 -------MTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPI 150
PPL PN+ S SP+ + K NS +++ ++
Sbjct: 268 PFVQGLQDVPPLAPPNHSF----------SESPHGSGVSKENS--EVKQETRADSSDCSD 315
Query: 151 HIDPESIKPPKRRNVK-ISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEA 209
+D + K R + +SK+ VA R RR+ ++ER+ L+ +VP TKMD AS+L +A
Sbjct: 316 QVDEDDEKATGRSGRRHLSKNL--VAERKRRKKLNERLYSLRALVPKITKMDRASILGDA 373
Query: 210 IHYVKFLKKQVHTLE 224
I YVK L++QV L+
Sbjct: 374 IEYVKELQQQVKELQ 388
>gi|222619489|gb|EEE55621.1| hypothetical protein OsJ_03959 [Oryza sativa Japonica Group]
Length = 166
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 35/42 (83%)
Query: 165 VKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASML 206
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDTA+++
Sbjct: 11 AKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTAALV 52
>gi|302820581|ref|XP_002991957.1| hypothetical protein SELMODRAFT_430203 [Selaginella moellendorffii]
gi|300140199|gb|EFJ06925.1| hypothetical protein SELMODRAFT_430203 [Selaginella moellendorffii]
Length = 551
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 31/195 (15%)
Query: 41 PLPHEIHFSNANTNSNIS--TQPIYHNPNNYVSSPPPTFTNPSSSLPLFINTTTPVQE-- 96
P H++ FS+ + NI+ TQ N++ P T PS ++ + P ++
Sbjct: 214 PWEHDVGFSDNQFSLNIAAPTQL------NFLGQPSKTGGQPSDHFDKQVDCSRPEKQVP 267
Query: 97 ------PMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPI 150
PPL PN+ S SP+ + K NS +++ ++
Sbjct: 268 PFVQGLQDVPPLAPPNHSF----------SESPHGSGVSKENS--EVKQETRADSSDCSD 315
Query: 151 HIDPESIKPPKRRNVK-ISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEA 209
+D + K R + +SK+ VA R RR+ ++ER+ L+ +VP TKMD AS+L +A
Sbjct: 316 QVDEDDEKATGRSGRRHLSKNL--VAERKRRKKLNERLYSLRALVPKITKMDRASILGDA 373
Query: 210 IHYVKFLKKQVHTLE 224
I YVK L++QV L+
Sbjct: 374 IEYVKELQQQVKELQ 388
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ++VPG K+ A MLDE I+YV+FL+ QV L
Sbjct: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 26/198 (13%)
Query: 73 PPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRN 132
PPP+ ++ SS I + TP +P +PP T++ S + P++
Sbjct: 11 PPPSSSDELSSFLRQILSRTPTAQPSSPPKS------------TNVSSAETFFPSV---- 54
Query: 133 SMAAMREMIFRIA--AMQPIHIDPESIKPPKRRNVKISKDPQ--SVAARHRREMISERIR 188
S A+ + + ++ + + +R ++K S D Q +++ + RR I+E+++
Sbjct: 55 SGGAVSSVGYGVSETGQDKYAFEHKRSGAKQRNSLKRSIDAQFHNLSEKKRRSKINEKMK 114
Query: 189 ILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYP 248
LQ+++P K D ASMLDEAI Y+K L+ QV TL M G+G + V P
Sbjct: 115 ALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLA------VMNGLGLNPMRLPQVPPP 168
Query: 249 SLVKASHQMVDNINMQMF 266
+ + + + ++N++
Sbjct: 169 THTRINETLEQDLNLETL 186
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKM---DTASMLDEAIHYVKFLKKQV 220
+ DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV
Sbjct: 245 ATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQLQV 300
>gi|125545578|gb|EAY91717.1| hypothetical protein OsI_13359 [Oryza sativa Indica Group]
Length = 359
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
+A R RRE +S+R L +IVPG KMD AS+L +AI YVK L+ QV LE+ RP+
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRPV 242
>gi|356574149|ref|XP_003555214.1| PREDICTED: transcription factor ABORTED MICROSPORES-like [Glycine
max]
Length = 529
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
Query: 34 AFNNNISPLPHEIHFS-NANTNSNISTQPIYHNPN--NYVSSPPPTFTNPSSSLPLFINT 90
N I + H + F + N+ SN+ + P+ + N N S T N SS T
Sbjct: 155 VINQCIEAVNHSMSFHIDENSMSNMQSNPLIGDENEGNNNSRDTSTLQNMSSQW-----T 209
Query: 91 TTPVQEPMTPPLHQPNNVVTGGRLKTSLPSP--SPYPPTLEKRNSMAAMREMIFRIAAMQ 148
+ +Q H+ + L T+ S P ++ ++ ++ R +M
Sbjct: 210 SAVLQTNQEDQEHEHEHDTYQKSLMTTTDSQYVEPLEAKEKQEEDKDLLKNVVGRSDSMS 269
Query: 149 PIHIDPESIKPPK--RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASML 206
E + K RRN K ++ VA R RR+ +++R+ L+ +VP +K+D AS+L
Sbjct: 270 DCSDQNEEEEDGKYRRRNGKGNQSKNLVAERKRRKKLNDRLYNLRSLVPRISKLDRASIL 329
Query: 207 DEAIHYVKFLKKQVHTLE 224
+AI YVK L+KQV L+
Sbjct: 330 GDAIEYVKDLQKQVKELQ 347
>gi|115455061|ref|NP_001051131.1| Os03g0725800 [Oryza sativa Japonica Group]
gi|41469283|gb|AAS07165.1| putative symbiotic ammonium transport protein [Oryza sativa
Japonica Group]
gi|50428739|gb|AAT77090.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108710844|gb|ABF98639.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549602|dbj|BAF13045.1| Os03g0725800 [Oryza sativa Japonica Group]
gi|215767830|dbj|BAH00059.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 359
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
+A R RRE +S+R L +IVPG KMD AS+L +AI YVK L+ QV LE+ RP+
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRPV 242
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P PP RR+ S D + + R RR+ I+E++R LQ ++P TK D SMLDEAI Y+
Sbjct: 8 PRRATPPTRRSR--SADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYL 65
Query: 214 KFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYPSLVKASHQMVDNINMQM 265
K L+ Q+ L V +G MA V P L + H + + QM
Sbjct: 66 KSLQLQLQML-----------VMGKGGGMAPVVPPELQQYMHYITADPAHQM 106
>gi|242038015|ref|XP_002466402.1| hypothetical protein SORBIDRAFT_01g007160 [Sorghum bicolor]
gi|241920256|gb|EER93400.1| hypothetical protein SORBIDRAFT_01g007160 [Sorghum bicolor]
Length = 292
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 47/54 (87%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER++ILQ++VP GTK+D ++ML+EA+HYV+FL++Q+ L
Sbjct: 212 DPQSLYARRRRERINERLKILQKLVPNGTKVDISTMLEEAVHYVRFLQQQIKML 265
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQ 225
P+S+A R RR IS+RIR LQ +VP K +TA ML+EA+ YVKFL+KQ+ L +
Sbjct: 178 PRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTE 233
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 26/198 (13%)
Query: 73 PPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRN 132
PPP+ ++ SS I + TP +P +PP T++ S + P++
Sbjct: 11 PPPSSSDELSSFLRHILSRTPTAQPSSPPK------------STNVSSAETFFPSV---- 54
Query: 133 SMAAMREMIFRIA--AMQPIHIDPESIKPPKRRNVKISKDPQ--SVAARHRREMISERIR 188
S A+ + + ++ + + +R ++K + D Q +++ + RR I+E+++
Sbjct: 55 SGGAVSSVGYGVSETGQDKYAFEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMK 114
Query: 189 ILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYP 248
LQ+++P K D ASMLDEAI Y+K L+ QV TL M G+G + V P
Sbjct: 115 ALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLA------VMNGLGLNPMRLPQVPPP 168
Query: 249 SLVKASHQMVDNINMQMF 266
+ + + + ++N++
Sbjct: 169 THTRINETLEQDLNLETL 186
>gi|356536103|ref|XP_003536579.1| PREDICTED: transcription factor bHLH84-like [Glycine max]
Length = 352
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 153 DPESIKPPKRR---NVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEA 209
D S+K ++ N + DPQSV AR RRE I+ER++ILQ +VP GTK+D ++ML+EA
Sbjct: 249 DSTSLKLKGKKSTANRGSATDPQSVYARRRRERINERLKILQNLVPNGTKVDISTMLEEA 308
Query: 210 IHYVKFLKKQVHTL 223
+ YVKFL+ Q+ L
Sbjct: 309 VQYVKFLQLQIKLL 322
>gi|449435928|ref|XP_004135746.1| PREDICTED: uncharacterized protein LOC101220022 [Cucumis sativus]
gi|449515945|ref|XP_004165008.1| PREDICTED: uncharacterized protein LOC101226994 [Cucumis sativus]
Length = 308
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 172 QSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
Q++AAR RR I+ + + L +VPGG+KM+TA ML+ A YVKFL+ QV L+
Sbjct: 189 QTIAARERRRKITVKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ 241
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR IS+RIR LQ +VP K +TA MLDEA+ YVKFL++Q+ L
Sbjct: 180 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQRQIQEL 233
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 82/208 (39%), Gaps = 24/208 (11%)
Query: 21 VIMQMEKLPEFCEAFNNNISPLPHEIHFSNANTNSNISTQPIYHNPNNYVSSPPPTFTNP 80
V++ + C AF + P A Q + + N++ S +
Sbjct: 36 VMLHDGRYRAICGAFGGYLQEWPDMSSACYAGGFGATPVQEVSNGGNSFSCSGGGSTKRK 95
Query: 81 SSS-LPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMRE 139
S + L P + L Q + GR K P P ++ A ++
Sbjct: 96 SDAYLDAKGECKRPRGKQQVCELDQSS-----GRGK-----PEKAKPAGTRKKGDVAAQK 145
Query: 140 MIFRIAAMQP---IHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPG 196
R A Q IH+ R + D S+A R RRE ISER+R LQ +VPG
Sbjct: 146 QDPRAAGGQKTDYIHV---------RARRGQATDSHSLAERVRRERISERMRYLQELVPG 196
Query: 197 GTKM-DTASMLDEAIHYVKFLKKQVHTL 223
K+ A MLDE I+YV+ L+KQV L
Sbjct: 197 CDKVTGKAGMLDEIINYVQSLQKQVEFL 224
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQ 225
P+S+A R RR IS+RIR LQ +VP K +TA MLDEA+ YVKFL+KQ+ L +
Sbjct: 91 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQIEELSE 146
>gi|222625712|gb|EEE59844.1| hypothetical protein OsJ_12417 [Oryza sativa Japonica Group]
Length = 201
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
+A R RRE +S+R L +IVPG KMD AS+L +AI YVK L+ QV LE+ RP+
Sbjct: 26 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRPV 84
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 33/180 (18%)
Query: 65 NPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPY 124
+ +NY PP+ ++ S+ I + TP +P +PP + T + L SPS Y
Sbjct: 3 DSDNYDHLAPPSSSDELSAFLRQILSRTPTTQPSSPPQRIFYSDETFPSVSGGLLSPSGY 62
Query: 125 PPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPK-----RRNVKISKDPQ--SVAAR 177
A H D + + + R ++K + D Q +++ +
Sbjct: 63 --------------------AVADTGHQDKNAFENKRNGGRQRNSLKRNIDAQFHNLSEK 102
Query: 178 HRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGF 237
RR I+E+++ LQ+++P K D ASMLDEAI Y+K L+ QV TL M G+G
Sbjct: 103 RRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYMKQLQLQVQTLA------VMNGLGL 156
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQ 225
P+S+A R RR IS+RIR LQ +VP K +TA ML+EA+ YVKFL+KQ+ L +
Sbjct: 193 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTE 248
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
+ D S+A R RRE ISER+R LQ +VPG +K+ A MLDE I+YV+ L+KQV L
Sbjct: 153 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 209
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
+ D S+A R RRE ISER+R LQ +VPG +K+ A MLDE I+YV+ L+KQV L
Sbjct: 153 ATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 209
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 26/198 (13%)
Query: 73 PPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRN 132
PPP+ ++ SS I + TP +P +PP T++ S + P++
Sbjct: 11 PPPSSSDELSSFLRQILSRTPTAQPSSPPKS------------TNVSSAETFFPSV---- 54
Query: 133 SMAAMREMIFRIA--AMQPIHIDPESIKPPKRRNVKISKDPQ--SVAARHRREMISERIR 188
S A+ + + ++ + + +R ++K + D Q +++ + RR I+E+++
Sbjct: 55 SGGAVSSVGYGVSETGQDKYAFEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMK 114
Query: 189 ILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYP 248
LQ+++P K D ASMLDEAI Y+K L+ QV TL M G+G + V P
Sbjct: 115 ALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLA------VMNGLGLNPMRLPQVPPP 168
Query: 249 SLVKASHQMVDNINMQMF 266
+ + + + ++N++
Sbjct: 169 THTRINETLEQDLNLETL 186
>gi|239051052|ref|NP_001132631.2| uncharacterized protein LOC100194106 [Zea mays]
gi|238908727|gb|ACF81557.2| unknown [Zea mays]
gi|414872549|tpg|DAA51106.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 364
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
+A R RRE +S+R L +IVPG KMD AS+L +AI YVK L+ QV LE RP+
Sbjct: 189 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDDARRRPV 247
>gi|357453543|ref|XP_003597049.1| Transcription factor bHLH117 [Medicago truncatula]
gi|355486097|gb|AES67300.1| Transcription factor bHLH117 [Medicago truncatula]
Length = 285
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
PQS AR RR+ +SE+ R LQ+++P +MD A++ +EA YVKFL+ Q+ L+
Sbjct: 146 PQSNLARQRRQKLSEKTRCLQKLMPWDKRMDQATLYEEAYKYVKFLQAQLSVLQ 199
>gi|413933203|gb|AFW67754.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 341
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
+A R RRE +S+R L +IVPG KMD AS+L +AI YVK L+ QV LE RP+
Sbjct: 165 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDDARRRPV 223
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVH----TLE 224
D S+A R RRE ISER+++LQ IVPG K + AS+LDE I+Y++ L++QV LE
Sbjct: 132 DSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLSMKLE 191
Query: 225 QAGAHRPMGGVGF 237
AH V F
Sbjct: 192 AINAHVSNATVAF 204
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM------DTASMLDEAIHYVKFLKKQ 219
DP S+A R RRE I+ER++ LQ +VP K+ D ASMLDE I YVKFL+ Q
Sbjct: 294 DPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVKFLQLQ 349
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 26/196 (13%)
Query: 73 PPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRN 132
PPP+ ++ SS I + TP +P +PP K ++ S + P++
Sbjct: 11 PPPSSSDELSSFLRQILSRTPTAQPSSPP-------------KRNVSSAETFFPSV---- 53
Query: 133 SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQ--SVAARHRREMISERIRIL 190
S A+ + + A + + + +R ++K + D Q +++ + RR I+E+++ L
Sbjct: 54 SGGAVSIAGYGV-AQEKYAFENKRNGAKQRNSLKRTIDAQFHNLSEKRRRSKINEKMKAL 112
Query: 191 QRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYPSL 250
Q+++P K D ASMLDEAI Y+K L+ QV TL M G+G + V P+
Sbjct: 113 QKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAV------MNGLGLNPMRLPPVLPPTH 166
Query: 251 VKASHQMVDNINMQMF 266
+ + + ++N++
Sbjct: 167 TRINETLEQDMNLETL 182
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R LQ +VPG +K+ A MLDE I+YV+ L+KQV L
Sbjct: 162 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 216
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQ 225
P+S+A R RR IS+RIR LQ +VP K +TA MLDEA+ YVKFL+ Q+ L +
Sbjct: 128 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQIEELSE 183
>gi|226529722|ref|NP_001147789.1| symbiotic ammonium transporter [Zea mays]
gi|195613768|gb|ACG28714.1| symbiotic ammonium transporter [Zea mays]
Length = 359
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
+A R RRE +S+R L +IVPG KMD AS+L +AI YVK L+ QV LE RP+
Sbjct: 184 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDDARRRPV 242
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 82/196 (41%), Gaps = 53/196 (27%)
Query: 90 TTTPVQ--EPMTPPLHQPNNVV-----TGGRLKTS---LPSPSPYPPTL----------E 129
TTTP + TP P + GGR +S PSPS + L +
Sbjct: 61 TTTPSRSRSASTPRAAGPAKRLLDGGHDGGRTVSSPNLAPSPSEFAVVLRLGVTEFGFSQ 120
Query: 130 KRN--SMAAMREMIFRIAA------------MQPIHIDPE---------------SIKPP 160
R+ +A + +F AA Q H P+ + +P
Sbjct: 121 DRDPVQLAGLFAPVFGAAAGVQPPHLRAPPPPQVFHAQPKPGEGAMAAPQPQQPPAPRPK 180
Query: 161 KRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
R + DP S+A R RRE I+ER+R LQ +VP K D A+MLDE + YVKFL+ QV
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQV 240
Query: 221 HTLEQAGAHRPMGGVG 236
L + +GG G
Sbjct: 241 KVLSMS----RLGGAG 252
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R LQ +VPG +K+ A MLDE I+YV+ L+KQV L
Sbjct: 152 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 206
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 60/113 (53%), Gaps = 18/113 (15%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVH----TLE 224
D S+A R RRE ISER+++LQ IVPG K + AS+LDE I+Y++ L++QV LE
Sbjct: 59 DSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLSMKLE 118
Query: 225 QAGAHRPMGGVGF----QGAPMAGVAYPSLV--------KASHQMVDNINMQM 265
AH V F GAP A PSL A M D ++MQ+
Sbjct: 119 TINAHMNNATVAFPTKDFGAPPYNTA-PSLTLDPQTPREYAQGSMSDWLHMQI 170
>gi|356565449|ref|XP_003550952.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 324
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +S+R L IVPG KMD A++L++AI YVK L+++V TLE+ + +
Sbjct: 156 IAERKRREKLSQRFIALSAIVPGLKKMDKATVLEDAIKYVKQLQERVKTLEEQAVDKTVE 215
Query: 234 GVGF--QGAPMAGV 245
F + AGV
Sbjct: 216 SAVFVKRSVVFAGV 229
>gi|226501366|ref|NP_001148121.1| symbiotic ammonium transporter [Zea mays]
gi|195615934|gb|ACG29797.1| symbiotic ammonium transporter [Zea mays]
Length = 340
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
+A R RRE +S+R L +IVPG KMD AS+L +AI YVK L+ QV LE RP+
Sbjct: 163 LAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEDDARRRPV 221
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R LQ +VPG +K+ A MLDE I+YV+ L+KQV L
Sbjct: 152 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 206
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPG-GTKMDTASMLDEAIHYVKFLKKQVHTLEQAGA 228
P+S+A R RR ISER+R LQ +VP T+ +TA MLD A+ Y+K L++QV TLE+ A
Sbjct: 313 PRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKTLEETRA 371
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
R RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 152 RLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 198
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 144 IAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DT 202
+AAM+ +S+ R + P+S+A R RR ISER+R LQ +VP K +T
Sbjct: 304 MAAMEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNT 363
Query: 203 ASMLDEAIHYVKFLKKQVHTLEQAGAH 229
A MLD A+ Y+K L+KQ +TL AH
Sbjct: 364 ADMLDLAVEYIKDLQKQYNTLTDNRAH 390
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 144 IAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DT 202
+AAM+ +S+ R + P+S+A R RR ISER+R LQ +VP K +T
Sbjct: 293 MAAMEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNT 352
Query: 203 ASMLDEAIHYVKFLKKQVHTLEQAGAH 229
A MLD A+ Y+K L+KQ +TL AH
Sbjct: 353 ADMLDLAVEYIKDLQKQYNTLTDNRAH 379
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R LQ +VPG +K+ A MLDE I+YV+ L+KQV L
Sbjct: 152 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 206
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
++ R RR+ I+E++R LQ ++P K D ASMLDEAI Y+K L+ QV + + PM
Sbjct: 374 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMM 433
Query: 234 GVGFQ 238
GFQ
Sbjct: 434 FPGFQ 438
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 61/131 (46%), Gaps = 26/131 (19%)
Query: 94 VQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHID 153
+Q+P+ P L P+ GGR ++ MAA+ E + P I
Sbjct: 283 LQQPLAPQLSLPSGKNKGGRAASA---------------EMAAI-EKFLQFQDAVPCKI- 325
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHY 212
R + P+S+A R RR ISERIR LQ +VP K +TA MLD A+ Y
Sbjct: 326 --------RAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDY 377
Query: 213 VKFLKKQVHTL 223
+K L+KQV L
Sbjct: 378 IKDLQKQVKVL 388
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R LQ +VPG K+ A MLDE I+YV+ L+KQV L
Sbjct: 173 DSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFL 227
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R LQ +VPG +K+ A MLDE I+YV+ L+KQV L
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFL 209
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGA 228
D S+A R RRE ISER+R LQ +VPG +K+ A MLDE I+YV+ L+KQV A A
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEVNGTAAA 214
Query: 229 HRPMGGVGFQGAPMAGVAYPSLVKASHQMVDNINMQM 265
+G Q +G S ++DN+ M+M
Sbjct: 215 WD----IGSQNL-FSGFDAQFQSVESGCLLDNLKMEM 246
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R LQ +VPG K+ A MLDE I+YV+ L+KQV L
Sbjct: 173 DSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFL 227
>gi|357117240|ref|XP_003560380.1| PREDICTED: transcription factor bHLH25-like [Brachypodium
distachyon]
Length = 349
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHR 230
+A R RRE +SER L +IVPG KMD AS+L +AI YVK L+ QV +E++ R
Sbjct: 170 LAERKRREKLSERFIALSKIVPGLKKMDKASVLGDAIKYVKTLQDQVKGMEESARLR 226
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 179 RREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 296
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 144 IAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DT 202
+AAM+ +S+ R + P+S+A R RR ISER+R LQ +VP K +T
Sbjct: 179 MAAMEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNT 238
Query: 203 ASMLDEAIHYVKFLKKQVHTLEQAGAH 229
A MLD A+ Y+K L+KQ +TL AH
Sbjct: 239 ADMLDLAVEYIKDLQKQYNTLTDNRAH 265
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTK--MDTASMLDEAIHYVKFLKKQVHTLEQ 225
P+S+A R RR ISER+R LQ +VP K ++ A MLDEA+ YVK L+KQV L +
Sbjct: 478 PRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQKQVQELAE 534
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 179 RREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 251 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 295
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQR+VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 181 DSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 235
>gi|224105829|ref|XP_002313947.1| predicted protein [Populus trichocarpa]
gi|222850355|gb|EEE87902.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +S+R L +VPG KMD AS+L +AI Y+K L+++V TLE+ + M
Sbjct: 150 IAERKRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKQLQEKVKTLEEQTKRKTME 209
Query: 234 GVGFQGAPMAGVAYPSLVKASHQMVD 259
V +VK SH VD
Sbjct: 210 SV-------------VIVKKSHIYVD 222
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 179 RREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 296
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 138 REMIFRIAAMQPIHIDPES--IKPPKRRNVKISKDPQ--SVAARHRREMISERIRILQRI 193
R++ +A Q +D ES + R++K S+ + +++ R RR+ I+E++R LQ +
Sbjct: 372 RKIQAECSASQDEDLDDESGALLRSTNRSMKRSRTAEVHNLSERRRRDRINEKMRALQEL 431
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+P K+D ASMLDEAI Y+K L+ QV +
Sbjct: 432 IPNCNKIDKASMLDEAIEYLKTLQLQVQMM 461
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R LQ +VPG K+ A MLDE I+YV+ L+KQV L
Sbjct: 159 DSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFL 213
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 11/91 (12%)
Query: 158 KPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
+PPK+ + + + D S+A R RRE ISER++ILQ +VPG K + AS+LDE I
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 178
Query: 211 HYVKFLKKQVH----TLEQAGAHRPMGGVGF 237
+Y++ L+ QV LE +H G V F
Sbjct: 179 NYIQSLQHQVEFLSMKLEAVNSHMINGIVAF 209
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 154 PESIKPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASML 206
P +PPK+ + + + D S+A R RRE ISER++ILQ +VPG KM A +L
Sbjct: 106 PSESEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVL 165
Query: 207 DEAIHYVKFLKKQVHTL 223
DE I+Y++ L+ QV L
Sbjct: 166 DEIINYIQSLQHQVEFL 182
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQR+VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 173 DSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 227
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 7/63 (11%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTK-------MDTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISER+R LQ +VP K +T+ MLDEA+ Y+KFL+KQV L
Sbjct: 426 PRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYMKFLQKQVDDL 485
Query: 224 EQA 226
++
Sbjct: 486 QEC 488
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R LQ +VPG K+ A MLDE I+YV+ L+KQV L
Sbjct: 173 DSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFL 227
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQR+VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 156 DSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 210
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHY 212
PE I RR + D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+Y
Sbjct: 206 PEYIHVRARRGQ--ATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINY 263
Query: 213 VKFLKKQVHTL 223
V+ L++QV L
Sbjct: 264 VQSLQRQVEFL 274
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVH----TLE 224
D S+A R RRE ISER++ILQ +VPG K + AS+LDE I+Y++ L++QV LE
Sbjct: 143 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLE 202
Query: 225 QAGAHRPMGGVGF 237
AH G F
Sbjct: 203 AVNAHVNNGIEAF 215
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 163 RNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHT 222
RN K+ +++ R RR+ I+E+IR L+ ++P KMD ASMLD+AI Y+K LK Q+
Sbjct: 208 RNAKV----HNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQI 263
Query: 223 LEQAGA 228
+ A
Sbjct: 264 MSMGRA 269
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 163 RNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHT 222
RN K+ +++ R RR+ I+E+IR L+ ++P KMD ASMLD+AI Y+K LK Q+
Sbjct: 208 RNAKV----HNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQI 263
Query: 223 LEQAGA 228
+ A
Sbjct: 264 MSMGRA 269
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG +K M AS LDE I+YV+ L++QV L
Sbjct: 141 DSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEFL 195
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV + A +
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGY 405
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV + A +
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGY 405
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVH----TLE 224
D S+A R RRE ISER++ILQ +VPG K + AS+LDE I+Y++ L++QV LE
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLE 204
Query: 225 QAGAH 229
AH
Sbjct: 205 AVNAH 209
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVH----TLE 224
D S+A R RRE ISER++ILQ +VPG K + AS+LDE I+Y++ L++QV LE
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLE 204
Query: 225 QAGAH 229
AH
Sbjct: 205 AVNAH 209
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV + A +
Sbjct: 348 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGY 403
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
++ R RR+ I+E++R LQ ++P K D ASMLDEAI Y+K L+ Q+ + G PM
Sbjct: 193 LSERRRRDRINEKMRALQELIPHCYKTDKASMLDEAIEYLKSLQLQLQVMWMGGGMAPM 251
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 143 RIAAMQPIHIDPESI--KPPKRRN--VKISKDPQ--SVAARHRREMISERIRILQRIVPG 196
+I Q +PE + + P R VK S++ Q ++ R RR+ I++R+RIL+ ++P
Sbjct: 721 KITVTQENDEEPEDVVKEKPAREGTGVKRSRNAQVHNLCERKRRDKINKRMRILKELIPN 780
Query: 197 GTKMDTASMLDEAIHYVKFLKKQVH 221
K D ASMLD+AI Y+K LK Q+
Sbjct: 781 CNKTDKASMLDDAIEYLKTLKLQIQ 805
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 33/171 (19%)
Query: 74 PPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNS 133
PP+ ++ S+ I + TP +P +PP + T + L SPS Y
Sbjct: 12 PPSSSDELSAFLRQILSRTPTTQPSSPPQRIFYSDETFPSVSGGLVSPSGY--------- 62
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPK-----RRNVKISKDPQ--SVAARHRREMISER 186
A H D + + + R ++K + D Q +++ + RR I+E+
Sbjct: 63 -----------AVADTGHQDKNAFENKRNGGRQRNSLKRNIDAQFHNLSEKRRRSKINEK 111
Query: 187 IRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGF 237
++ LQ+++P K D ASMLDEAI Y+K L+ QV TL M G+G
Sbjct: 112 MKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLA------VMNGLGL 156
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L+KQV L
Sbjct: 200 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFL 254
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L+KQV L
Sbjct: 200 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFL 254
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + AS+LDE I+Y++ L++QV L
Sbjct: 68 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 122
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPG-GTKMDTASMLDEAIHYVKFLKKQVHTLEQAGA 228
P+S+A R RR ISER+R LQ +VP T+ +TA MLD A+ Y+K L++QV LE++ A
Sbjct: 314 PRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRA 372
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVH----TLE 224
D S+A R RRE ISER++ILQ +VPG K + AS+LDE I+Y++ L++QV LE
Sbjct: 104 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLE 163
Query: 225 QAGAH 229
AH
Sbjct: 164 AVNAH 168
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 144 IAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DT 202
IAA++ +S+ R + P+S+A R RR ISER+R LQ +VP K +T
Sbjct: 313 IAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNT 372
Query: 203 ASMLDEAIHYVKFLKKQVHTLEQAGA 228
A MLD A+ Y+K L+KQV TL A
Sbjct: 373 ADMLDLAVDYIKDLQKQVQTLSDCHA 398
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 160 PKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQ 219
P RR+ S D + + R RR+ I+E++R LQ ++P TK D SMLDEAI Y+K L+ Q
Sbjct: 15 PTRRSR--SADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQ 72
Query: 220 VHTLEQAGAHRPMGGVGFQGAPMAGVAYPSLVKASHQMVDNINMQM 265
+ L V +G MA V P L + H + + QM
Sbjct: 73 LQML-----------VMGKGGGMAPVVPPELQQYMHYITADPAHQM 107
>gi|3127045|gb|AAC39455.1| bHLH transcription factor JAF13 [Petunia x hybrida]
Length = 628
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRP 231
++ R RRE I+ER +L ++P G K+D S+LDE I Y+K L+++V LE RP
Sbjct: 441 ISERRRREKINERFMLLASMLPAGGKVDKISLLDETIEYLKELERRVQDLEAKSGRRP 498
>gi|356514380|ref|XP_003525884.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 347
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
++ R RRE +S+R L I+PG KMD A++L++AI YVK L+++V TLE+ + +
Sbjct: 179 ISERKRREKLSQRFIALSAIIPGLKKMDKATVLEDAIKYVKQLQERVKTLEEQAVDKTVE 238
Query: 234 GVGF 237
F
Sbjct: 239 SAVF 242
>gi|255554513|ref|XP_002518295.1| DNA binding protein, putative [Ricinus communis]
gi|223542515|gb|EEF44055.1| DNA binding protein, putative [Ricinus communis]
Length = 309
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +S+R L IVPG KMD AS+L +AI Y+K L+++V TLE+ + M
Sbjct: 134 IAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKKKTME 193
Query: 234 GV 235
V
Sbjct: 194 SV 195
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 11/93 (11%)
Query: 156 SIKPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDE 208
+ +PPK+ + + + D S+A R RRE ISER+++LQ +VPG K + AS+LDE
Sbjct: 113 AAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDE 172
Query: 209 AIHYVKFLKKQVH----TLEQAGAHRPMGGVGF 237
I+Y++ L+ QV LE AH G F
Sbjct: 173 IINYIQSLQCQVEFLSMKLEAVNAHANQGVEAF 205
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHY 212
P+ I RR + D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+Y
Sbjct: 244 PDYIHVRARRGQ--ATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 301
Query: 213 VKFLKKQVHTL 223
V+ L++QV L
Sbjct: 302 VQSLQRQVEFL 312
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHY 212
P+ I RR + D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+Y
Sbjct: 244 PDYIHVRARRGQ--ATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 301
Query: 213 VKFLKKQVHTL 223
V+ L++QV L
Sbjct: 302 VQSLQRQVEFL 312
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHY 212
P+S+ R + P+S+A R RR ISER+R LQ +VP K +TA MLD A+ Y
Sbjct: 293 PDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEY 352
Query: 213 VKFLKKQVHTLEQAGA 228
+K L+KQ TL + A
Sbjct: 353 IKDLQKQFKTLSEKRA 368
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 179 RREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
RRE I+ER++ LQ +VP K D ASMLDE I YVKFL+ QV L
Sbjct: 142 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVL 186
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 300 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 354
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 353 SLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 404
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+ ILQ +VPG K + AS+LDE I+Y++ L++QV L
Sbjct: 140 DSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 194
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 153 DPESIKPPKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAI 210
+P ++ R+ K S+ + +++ R RR+ I+E++R LQ ++P K+D ASMLDEAI
Sbjct: 296 EPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAI 355
Query: 211 HYVKFLKKQVHTL 223
Y+K L+ QV +
Sbjct: 356 EYLKTLQLQVQMM 368
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 353 SLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 404
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 94 VQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHID 153
V+ M PPL GG + ++ P+P L + +S+ A + + D
Sbjct: 313 VEVTMEPPLGWHGVSSLGGAV--TVGEPAPRLEGLIRHSSLPATSRPFSSTFELDDLQAD 370
Query: 154 PESIKPPK-RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIH 211
P + R N + P+S+A R RR ISER++ LQ +VP + +TA MLD+A+
Sbjct: 371 PSMVYLKTLRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVE 430
Query: 212 YVKFLKKQVHTL 223
YVK L+ QV L
Sbjct: 431 YVKQLQLQVQEL 442
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 152 IDPESIKPPKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEA 209
ID S+KP R+ K ++ + +++ + RR I+E+++ LQ ++P +K D ASMLDEA
Sbjct: 121 IDEMSVKPAPPRSSKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSKTDKASMLDEA 180
Query: 210 IHYVKFLKKQVHTL 223
I Y+K L+ QV L
Sbjct: 181 IEYLKLLQLQVQGL 194
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
RRN QS R RR+ I+E++R LQ+++P K D ASML+EAI Y+K L+ Q+
Sbjct: 357 RRNRAAEVHNQS--ERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQ 414
Query: 222 TLEQAGAHRPMGGVGFQ------GAPMAGVAYPSL 250
+ G P+ G Q G M + PS+
Sbjct: 415 VMWMGGGMTPVMFPGIQHYMSQMGMGMGAPSLPSI 449
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 299 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQVEFL 353
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 7/78 (8%)
Query: 153 DPESIKPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASM 205
+P+S + PK + + + + S+A R RRE ISER+R+LQ +VPG K+ A M
Sbjct: 226 NPQSGEAPKDDYIHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVM 285
Query: 206 LDEAIHYVKFLKKQVHTL 223
LDE I+YV+ L++QV L
Sbjct: 286 LDEIINYVQSLQQQVEFL 303
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Query: 158 KPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
+PPK+ + + + D S+A R RRE ISER+++LQ +VPG K + AS+LDE I
Sbjct: 103 EPPKQDYIHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEII 162
Query: 211 HYVKFLKKQVH----TLEQAGAH 229
+Y++ L++QV LE AH
Sbjct: 163 NYIQALQRQVEFLSMKLEAVNAH 185
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 153 DPESIKPPKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAI 210
+P ++ R+ K S+ + +++ R RR+ I+E++R LQ ++P K+D ASMLDEAI
Sbjct: 368 EPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAI 427
Query: 211 HYVKFLKKQVHTL 223
Y+K L+ QV +
Sbjct: 428 EYLKTLQLQVQMM 440
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 395 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 449
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 348 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 402
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 153 DPESIKPPKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAI 210
+P ++ R+ K S+ + +++ R RR+ I+E++R LQ ++P K+D ASMLDEAI
Sbjct: 436 EPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAI 495
Query: 211 HYVKFLKKQVHTL 223
Y+K L+ QV +
Sbjct: 496 EYLKTLQLQVQMM 508
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 153 DPESIKPPKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAI 210
+P ++ R+ K S+ + +++ R RR+ I+E++R LQ ++P K+D ASMLDEAI
Sbjct: 424 EPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAI 483
Query: 211 HYVKFLKKQVHTL 223
Y+K L+ QV +
Sbjct: 484 EYLKTLQLQVQMM 496
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 102 LHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPK 161
+ +P + GR TS P P T KR S + E + M+ +D + KP
Sbjct: 528 IQEPTITSSSGRYATSA-EPPKEPVTGTKRKS-SEREEPECQSEDMEDESVDTKQ-KPAT 584
Query: 162 RRNVKISKDPQSV-----AARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
V +K ++ + R RR+ I+E++R LQ ++P K D ASMLDEAI Y+K L
Sbjct: 585 TGRVSTTKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKML 644
Query: 217 KKQVHTL 223
+ Q+ +
Sbjct: 645 QLQLQMM 651
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
++ R RR+ I+E++R LQ ++P K D ASMLDEAI Y+K L+ QV + + PM
Sbjct: 367 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMM 426
Query: 234 GVGFQ 238
G Q
Sbjct: 427 FPGIQ 431
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 367 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 421
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQR+VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 181 DSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 235
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQR+VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 189 DSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 243
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 277 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 328
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMD-TASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE I++R+++LQ +VPG K+ TA +LDE I++V+FL++QV L
Sbjct: 191 DSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQFLQRQVEIL 245
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 160 PKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
PK + K + PQ S++ R RR+ I++++R LQ ++P K+D ASMLD+AI Y+K L+
Sbjct: 371 PKSTSTKKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDKVDKASMLDKAIEYLKTLQ 430
Query: 218 KQVHTLEQAGA 228
Q+ + G+
Sbjct: 431 LQLQMMSMRGS 441
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 159 PPKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
PP R + K S+ + +++ + RR I+E+++ LQ ++P K D ASMLDEAI Y+K L
Sbjct: 81 PPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQL 140
Query: 217 KKQVHTL 223
+ QV L
Sbjct: 141 QLQVQML 147
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE-QAGAHRP 231
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV + AG + P
Sbjct: 464 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMP 522
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVH----TLE 224
D S+A R RRE I+ER++ILQ +VPG K + AS+LDE I+YV+ L++QV LE
Sbjct: 123 DSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQVEFLSMKLE 182
Query: 225 QAGAH 229
AH
Sbjct: 183 AVNAH 187
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 157 IKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
++PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I
Sbjct: 195 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254
Query: 211 HYVKFLKKQVHTL 223
+YV+ L++QV L
Sbjct: 255 NYVQSLQRQVEFL 267
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 359 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 413
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++Q+ L
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 15/131 (11%)
Query: 105 PNNVVTGGRLKTSLPSPSPYPPTLEKR-----NSMAAMREMIFRIAAMQPIHIDPESIKP 159
PN G + S S P EKR N+ A +R + + Q + +S +
Sbjct: 199 PNKNAEGDAVNDSPGKASNGPKEHEKRPKGEQNNGADVRG---KQSVKQAKDNNSQSGEA 255
Query: 160 PKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHY 212
PK + + + + S+A R RRE ISER+R+LQ +VPG K+ A MLDE I+Y
Sbjct: 256 PKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 315
Query: 213 VKFLKKQVHTL 223
V+ L++QV L
Sbjct: 316 VQSLQQQVEFL 326
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 394 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 448
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGA 228
P+S+A R RR ISER+R LQ +VP K +TA MLD A+ Y+K L+KQV TL A
Sbjct: 343 PRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVQTLSDCHA 401
>gi|3757520|gb|AAC64222.1| bHLH transcription factor [Arabidopsis thaliana]
Length = 467
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE--------- 224
+A R RR+ +++R+ L+ +VP TK+D AS+L +AI+YVK L+ + L+
Sbjct: 213 MAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSET 272
Query: 225 QAGAHRPMGGVGFQGAPMAGVAYPSL 250
+ G++RP GG+ G + G +P L
Sbjct: 273 EDGSNRPQGGMSLNGTVVTGF-HPGL 297
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++Q+ L
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 157 IKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
++PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I
Sbjct: 195 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254
Query: 211 HYVKFLKKQVHTL 223
+YV+ L++QV L
Sbjct: 255 NYVQSLQRQVEFL 267
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 162 DSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 216
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 381 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 435
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++Q+ L
Sbjct: 178 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 232
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 157 IKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
++PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I
Sbjct: 195 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254
Query: 211 HYVKFLKKQVHTL 223
+YV+ L++QV L
Sbjct: 255 NYVQSLQRQVEFL 267
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 450 DSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVENL 504
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 148 QPIHIDPESIKPPKRRNVKISKDPQSVAA-------RHRREMISERIRILQRIVPGGTKM 200
Q +D ES + ++N+ S +S AA R RR+ I+E+++ LQ ++P K
Sbjct: 234 QSEDVDFESAE--AKKNISGSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS 291
Query: 201 DTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQ 238
D ASMLDEAI Y+K L+ QV + PM G Q
Sbjct: 292 DKASMLDEAIDYLKSLQLQVQMMSMGCGMVPMMFPGIQ 329
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++Q+ L
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 159 PPKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
PP R + K S+ + +++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L
Sbjct: 10 PPARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKML 69
Query: 217 KKQVHTL 223
+ Q+ L
Sbjct: 70 QLQLQVL 76
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQR+VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 157 DSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 211
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 244 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 295
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQV 220
P+S+A R RR ISER+R LQ +VP K +T+ MLDEA+ Y+KFL+KQV
Sbjct: 35 PRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQKQV 85
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQ 225
P+S+A R RR IS+RIR LQ +VP K +TA ML+EA+ YVKFL++++ L +
Sbjct: 185 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELSE 240
>gi|359475553|ref|XP_002268443.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
gi|147839680|emb|CAN75020.1| hypothetical protein VITISV_039940 [Vitis vinifera]
Length = 331
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +S+R L IVPG KMD AS+L +AI Y+K L+++V TLE+ +
Sbjct: 160 IAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTRKKTTE 219
Query: 234 GVGF 237
V F
Sbjct: 220 SVVF 223
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++Q+ L
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISER+R LQ +VP K +T+ MLD A+ Y+K L+KQV TL
Sbjct: 369 PRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQVQTL 422
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISER+R LQ +VP K +T+ MLD A+ Y+K L+KQV TL
Sbjct: 369 PRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQVQTL 422
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 159 PPKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
PP R + K S+ + +++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L
Sbjct: 10 PPARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKML 69
Query: 217 KKQVHTL 223
+ Q+ L
Sbjct: 70 QLQLQVL 76
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHY 212
P+ I RR + D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+Y
Sbjct: 251 PDYIHVRARRGQ--ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 308
Query: 213 VKFLKKQVHTL 223
V+ L++QV L
Sbjct: 309 VQSLQRQVEFL 319
>gi|356522986|ref|XP_003530123.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 316
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 25/177 (14%)
Query: 64 HNPNNYVSSPPPTFTNPSSSLPLFINTT---TPVQEPMTPPLHQPNNVVTGGRLKTSLPS 120
H+PN+Y++ T + SSSL INT+ T +++ +P +P + + TS+P
Sbjct: 48 HSPNSYLTKERTTLLSNSSSLE-EINTSFDMTSLKQHASP--QKPKSCILSFEDSTSVPI 104
Query: 121 PSPYPPTL-EKRNSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHR 179
S L +S E+ R KP KR + +A R R
Sbjct: 105 TSKKTCQLYHGEHSKETQEELPNR--------------KPLKRD----TSFDHIMAERKR 146
Query: 180 REMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVG 236
RE IS L ++PG KMD AS+L AI +VK+L+++V LE+ R VG
Sbjct: 147 RENISRLFIALSALIPGLKKMDKASVLYNAIEHVKYLQQRVKDLEKDNKKRKTESVG 203
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE-QAGAHRP 231
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV + AG + P
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMP 386
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV +
Sbjct: 333 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 382
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE-QAGAHRP 231
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV + AG + P
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMP 386
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 355 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 409
>gi|224060969|ref|XP_002300300.1| predicted protein [Populus trichocarpa]
gi|222847558|gb|EEE85105.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 13/87 (14%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +S+R L +VPG KMD AS+L +AI Y+K L+++V TLE+ + M
Sbjct: 8 IAERKRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKTME 67
Query: 234 GVGFQGAPMAGVAYPSLVKASHQMVDN 260
V +VK SH VD
Sbjct: 68 SV-------------VIVKKSHVYVDE 81
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV +
Sbjct: 462 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMM 511
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE-QAGAHRP 231
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV + AG + P
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGIYMP 386
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQ 225
P+S+A R RR IS+RIR LQ +VP K +TA ML+EA+ YVKFL++++ L +
Sbjct: 115 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELSE 170
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 246 SLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 297
>gi|297736346|emb|CBI25069.3| unnamed protein product [Vitis vinifera]
Length = 344
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +S+R L IVPG KMD AS+L +AI Y+K L+++V TLE+ +
Sbjct: 173 IAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTRKKTTE 232
Query: 234 GVGF 237
V F
Sbjct: 233 SVVF 236
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE-QAGAHRP 231
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV + AG + P
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMP 386
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE-QAGAHRP 231
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV + AG + P
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMP 386
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV +
Sbjct: 469 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 518
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 15/85 (17%)
Query: 154 PESIKPPKRRNVKISK--------------DPQSVAARHRREMISERIRILQRIVPGGTK 199
P ++K RN +SK D S+A R RRE ISER++ LQ +VPG K
Sbjct: 33 PRALKDSNNRNKILSKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 92
Query: 200 M-DTASMLDEAIHYVKFLKKQVHTL 223
+ A MLDE I+YV+ L++QV +L
Sbjct: 93 VTGKAVMLDEIINYVQSLQRQVESL 117
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 261 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 315
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHY 212
P+ I RR + D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+Y
Sbjct: 232 PDYIHVRARRGQ--ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 289
Query: 213 VKFLKKQVHTL 223
V+ L++QV L
Sbjct: 290 VQSLQRQVEFL 300
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV +
Sbjct: 378 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 427
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE-QAGAHRP 231
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV + AG + P
Sbjct: 472 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMP 530
>gi|356574313|ref|XP_003555293.1| PREDICTED: transcription factor bHLH84-like [Glycine max]
Length = 353
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 153 DPESIKPPKRR---NVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEA 209
D S+K ++ N + DPQSV AR RRE I+ER+RILQ +VP GTK+D ++ML+EA
Sbjct: 250 DSTSLKLKGKKSTANRGSATDPQSVYARRRRERINERLRILQHLVPNGTKVDISTMLEEA 309
Query: 210 IHYVKFLKKQVHTL 223
+ YVKFL+ Q+ L
Sbjct: 310 VKYVKFLQLQIKLL 323
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 176 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 230
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 254 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 305
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 243 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 297
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHY 212
P+S+ R + P+S+A R RR ISER+R LQ +VP K +TA MLD A+ Y
Sbjct: 287 PDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEY 346
Query: 213 VKFLKKQVHTLEQAGA 228
+K L+KQ TL + A
Sbjct: 347 IKDLQKQFKTLSEKRA 362
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 158 KPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
+PPK+ + + + D S+A R RRE ISER+++LQ +VPG K + AS+LDE I
Sbjct: 117 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEII 176
Query: 211 HYVKFLKKQVHTL 223
+Y++ L+ QV L
Sbjct: 177 NYIQSLQCQVEFL 189
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 281 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 332
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMD-TASMLDEAIHYVKFLKKQV 220
+ D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+FL++QV
Sbjct: 13 ATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQRQV 66
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE-QAGAHRP 231
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV + AG + P
Sbjct: 442 LSERKRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMP 500
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 194 DSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFL 248
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 163 RNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
R K S+ + +++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV
Sbjct: 175 RGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQV 234
Query: 221 HTL 223
+
Sbjct: 235 QMM 237
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 378 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 432
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 413 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 467
>gi|22325727|ref|NP_179283.2| transcription factor ABORTED MICROSPORES [Arabidopsis thaliana]
gi|218563495|sp|Q9ZVX2.2|AMS_ARATH RecName: Full=Transcription factor ABORTED MICROSPORES; AltName:
Full=Basic helix-loop-helix protein 21; Short=AtbHLH21;
Short=bHLH 21; AltName: Full=Transcription factor EN 48;
AltName: Full=bHLH transcription factor bHLH021
gi|330251459|gb|AEC06553.1| transcription factor ABORTED MICROSPORES [Arabidopsis thaliana]
Length = 571
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE--------- 224
+A R RR+ +++R+ L+ +VP TK+D AS+L +AI+YVK L+ + L+
Sbjct: 317 MAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSET 376
Query: 225 QAGAHRPMGGVGFQGAPMAGVAYPSL 250
+ G++RP GG+ G + G +P L
Sbjct: 377 EDGSNRPQGGMSLNGTVVTGF-HPGL 401
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV +
Sbjct: 469 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 518
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 157 IKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
++PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I
Sbjct: 184 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 243
Query: 211 HYVKFLKKQVHTL 223
+YV+ L++QV L
Sbjct: 244 NYVQSLQRQVEFL 256
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 381 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 435
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV +
Sbjct: 454 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 503
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 381 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 435
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+++LQ +VPG TK+ A MLDE I+YV+ L++QV L
Sbjct: 186 SLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFL 237
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 163 RNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
R K S+ + +++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV
Sbjct: 378 RGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQV 437
Query: 221 HTL 223
+
Sbjct: 438 QMM 440
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHY 212
P+ I RR + D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+Y
Sbjct: 138 PDYIHVRARRGQ--ATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINY 195
Query: 213 VKFLKKQVHTL 223
V+ L++QV L
Sbjct: 196 VQSLQRQVEFL 206
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Query: 156 SIKPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDE 208
S +PPK+ + + + D S+A R RRE ISER++ILQ IVPG K + A +LDE
Sbjct: 89 SEQPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDE 148
Query: 209 AIHYVKFLKKQVHTL 223
I+Y++ L+ QV L
Sbjct: 149 IINYIQSLQHQVEFL 163
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR IS+RIR LQ +VP K +TA ML+EA+ YVK L++Q+ L
Sbjct: 194 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQEL 247
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D SVA R RR I+ER+R LQ IVPG K M A MLDE I+YV+ L+ QV L
Sbjct: 162 DSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFL 216
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE-QAGAHRP 231
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV + AG + P
Sbjct: 475 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGLYMP 533
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR IS+RIR LQ +VP K +TA ML+EA+ YVK L++Q+ L
Sbjct: 196 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQEL 249
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Query: 156 SIKPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDE 208
S +PPK+ + + + D S+A R RRE ISER++ILQ IVPG K + A +LDE
Sbjct: 89 SEQPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDE 148
Query: 209 AIHYVKFLKKQVHTL 223
I+Y++ L+ QV L
Sbjct: 149 IINYIQSLQHQVEFL 163
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 7/70 (10%)
Query: 158 KPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
+PPK+ + + + D S+A R RRE ISER++ILQ +VPG K + AS+LDE I
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 178
Query: 211 HYVKFLKKQV 220
+Y++ L+ QV
Sbjct: 179 NYIQSLQHQV 188
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
P+S+A R RR ISERIR LQ +VP K +TA MLD A+ Y+K L+KQV L A+
Sbjct: 170 PRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQVKVLNDGRAN 229
Query: 230 RPMGGVG 236
G G
Sbjct: 230 CTCSGGG 236
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV +
Sbjct: 359 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 408
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV +L
Sbjct: 397 DSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQVESL 451
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S +P +R + + + +++ R RR+ I+E++R LQ +VP K D AS+LDEAI Y+K
Sbjct: 219 SKRPAAKRRTR-AAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKS 277
Query: 216 LKKQVHTLEQA---------GAHRPM--GGVGFQGAPMAGVAYPSL 250
L+ QV + G H+ M G+G A M G L
Sbjct: 278 LQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACMPGAQAQGL 323
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 91 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 142
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV +
Sbjct: 169 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 218
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ IVPG K+ A +LDE I+Y++ L++QV L
Sbjct: 150 DSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQVEFL 204
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
+ D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 88 ATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFL 144
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 154 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 208
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S +P +R + + + +++ R RR+ I+E++R LQ +VP K D AS+LDEAI Y+K
Sbjct: 215 SKRPAAKRRTR-AAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKS 273
Query: 216 LKKQVHTLEQA---------GAHRPM--GGVGFQGAPMAGVAYPSL 250
L+ QV + G H+ M G+G A M G L
Sbjct: 274 LQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACMPGAQAQGL 319
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 272 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 326
>gi|441433511|gb|AGC31677.1| basic helix loop helix [Solanum tuberosum]
Length = 689
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+K+V LE H
Sbjct: 497 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKVQDLEARDRH 552
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 173 DSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 227
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
+ D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 13 ATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEFL 69
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 157 IKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
++PPK R + D S+A R RRE IS+R++ LQ +VPG K + A MLDE I
Sbjct: 181 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEII 240
Query: 211 HYVKFLKKQVHTL 223
+YV+ L++QV L
Sbjct: 241 NYVQSLQRQVEFL 253
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
K + R I +++ + RR I+E+++ LQ+++P K D ASMLDEAI Y+K L+
Sbjct: 95 KAVRTRQRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQ 154
Query: 218 KQVHTLEQAGAHRPMGGVGF 237
QV L M G+G
Sbjct: 155 LQVQALA------VMNGLGL 168
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQA 226
P+S+A R RR ISERIR LQ +VP K +T+ MLD A+ Y+K L+KQV L+++
Sbjct: 302 PRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKVLKES 358
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGA 228
D S+ R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV +A
Sbjct: 141 DSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEIINYVQSLQRQVEVARKAA- 199
Query: 229 HRPMGGV 235
+ GGV
Sbjct: 200 -KTTGGV 205
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
+ D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 118 ATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFL 174
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
P+S+A R RR ISERIR LQ +VP K +TA MLD A+ Y+K L+KQV L + A+
Sbjct: 79 PRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLNDSRAN 138
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L+ QV + + PM
Sbjct: 277 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMM 336
Query: 234 GVGFQ 238
G Q
Sbjct: 337 YPGVQ 341
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 158 KPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
+PPK+ + + + D S+A R RRE ISER++ILQ IVPG K + A +LDE I
Sbjct: 128 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEII 187
Query: 211 HYVKFLKKQVHTL 223
+Y++ L++QV L
Sbjct: 188 NYIQSLQRQVEFL 200
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 158 KPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
+PPK+ + + + D S+A R RRE ISER++ILQ +VPG K + A +LDE I
Sbjct: 137 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 196
Query: 211 HYVKFLKKQVHTL 223
+Y++ L++QV L
Sbjct: 197 NYIQSLQRQVEFL 209
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 158 KPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
+PPK+ + + + D S+A R RRE ISER++ILQ +VPG K + A +LDE I
Sbjct: 135 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 194
Query: 211 HYVKFLKKQVHTL 223
+Y++ L++QV L
Sbjct: 195 NYIQSLQRQVEFL 207
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPG-GTKMDTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG K A MLDE I+YV+ L++QV L
Sbjct: 243 SLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQQVEFL 294
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S +P +R + + + +++ R RR+ I+E++R LQ +VP K D AS+LDEAI Y+K
Sbjct: 218 SKRPAAKRRTR-AAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKS 276
Query: 216 LKKQVHTLEQA---------GAHRPM--GGVGFQGAPMAGVAYPSL 250
L+ QV + G H+ M G+G A M G L
Sbjct: 277 LQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACMPGAQAQGL 322
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ ++PG K+ A MLDE I+YV+ L++QV L
Sbjct: 201 DSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEFL 255
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 218 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 269
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGA 228
++ R RR+ I+E++R LQ ++P K D ASMLDEAI Y+K L+ QV + G
Sbjct: 322 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMMWMGGG 376
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ ++PG K+ A MLDE I+YV+ L++QV L
Sbjct: 201 DSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEFL 255
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
R RR+ I++R++ILQ++VP +K D ASMLDE I Y+K L+ QV + +
Sbjct: 225 RKRRDKINQRMKILQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSR 273
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 166 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 217
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L+ QV + PM
Sbjct: 323 LSERRRRDRINEKMKALQELIPRCNKTDKASMLDEAIEYLKTLQLQVQMMSMGCGMMPMM 382
Query: 234 GVGFQ 238
G Q
Sbjct: 383 FPGVQ 387
>gi|27650307|emb|CAD54298.1| bHLH transcription factor [Brassica napus]
Length = 564
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 152 IDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIH 211
ID E K++ K ++ A R RR+ +++R+ L+ +VP TK+D AS+L +AI+
Sbjct: 290 IDDEDDPKCKKKTGKHTQAKNLHAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAIN 349
Query: 212 YVKFLKKQVHTLE---------QAGAHRPMGGVGFQGAPMAG 244
YVK L+ + L+ + G++R GG+ G + G
Sbjct: 350 YVKELQNEAKELQDELEDNSETEDGSNRQQGGMSMNGTVLTG 391
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGA 228
+++ R RR+ I+E++R LQ ++P K D ASMLDEAI Y+K L+ QV + G
Sbjct: 42 NLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMMWMGGG 97
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG TK+ A MLDE I+YV+ L++QV L
Sbjct: 150 DRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQQVEFL 204
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 216 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 267
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 9/78 (11%)
Query: 155 ESIKPPK--------RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASM 205
E+ KPP+ R + D S+A R RRE ISER++ LQ +VPG K+ A M
Sbjct: 359 ENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 418
Query: 206 LDEAIHYVKFLKKQVHTL 223
LDE I+YV+ L++QV L
Sbjct: 419 LDEIINYVQSLQRQVEFL 436
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R LQ +VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 145 DSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFL 199
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 148 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 202
>gi|10998404|gb|AAG25927.1|AF260918_1 anthocyanin 1 [Petunia x hybrida]
gi|10998406|gb|AAG25928.1|AF260919_1 anthocyanin 1 [Petunia x hybrida]
Length = 668
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 162 RRNVKISKDPQS----VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
R+ I+++ S +A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+
Sbjct: 462 RKGCSITQEEPSGNHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 521
Query: 218 KQVHTLE 224
K+V LE
Sbjct: 522 KKVQDLE 528
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 166 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 220
>gi|401782370|dbj|BAM36702.1| bHLH transcriptional factor AN1 homolog [Rosa hybrid cultivar]
Length = 702
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+K++ LE H
Sbjct: 480 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLEARNVH 535
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 157 IKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
++PP+ R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I
Sbjct: 185 VEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 244
Query: 211 HYVKFLKKQVHTL 223
+YV+ L++QV L
Sbjct: 245 NYVQSLQRQVEFL 257
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 158 KPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
+PPK+ + + + D S+A R RRE ISER++ILQ +VPG K + A +LDE I
Sbjct: 137 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 196
Query: 211 HYVKFLKKQVHTL 223
+Y++ L++QV L
Sbjct: 197 NYIQSLQRQVEFL 209
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
P+S+A R RR ISERIR LQ +VP K +T+ MLD A+ Y+K L+KQV L++ A+
Sbjct: 295 PRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQVKVLKETQAN 354
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L+ QV + + PM
Sbjct: 315 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMM 374
Query: 234 GVGFQ 238
G Q
Sbjct: 375 YPGVQ 379
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR IS+RIR LQ +VP K +TA ML+EA+ YVK L+KQ+ L
Sbjct: 94 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQKQIEEL 147
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 151 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 205
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 159 PPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIH 211
PPK + + + + S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+
Sbjct: 363 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 422
Query: 212 YVKFLKKQVHTL 223
YV+ L++QV L
Sbjct: 423 YVQSLQRQVEFL 434
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQ 225
P+S+A R+RR ISER++ LQ +VP K +TA MLDEA+ YVK L+ QV L +
Sbjct: 25 PRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQVKDLSE 80
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 178 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 232
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 268 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 319
>gi|223702418|gb|ACN21640.1| putative basic helix-loop-helix protein BHLH19 [Lotus japonicus]
Length = 307
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +S+ L I+PG KMD AS+L AI VK L++QV TLE+ A + G
Sbjct: 128 IAERKRREKLSQSFVALSAILPGLKKMDKASILGGAIRSVKQLQEQVQTLEEQAAKKRTG 187
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 159 PPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIH 211
PPK + + + + S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+
Sbjct: 361 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIIN 420
Query: 212 YVKFLKKQVHTL 223
YV+ L++QV L
Sbjct: 421 YVQSLQRQVEFL 432
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 144 IAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DT 202
+AA++ +S+ R + P+S+A R RR ISER+R LQ +VP K +T
Sbjct: 323 MAAIEKFLQLSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNT 382
Query: 203 ASMLDEAIHYVKFLKKQVHTL 223
A MLD A+ Y+K L+ QV TL
Sbjct: 383 ADMLDLAVEYIKDLQNQVQTL 403
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 158 KPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIH 211
+PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I+
Sbjct: 244 EPPKDYIHFRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 303
Query: 212 YVKFLKKQVHTL 223
YV+ L++QV L
Sbjct: 304 YVQSLQRQVEFL 315
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 145 AAMQPIHIDPESIKPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGT 198
A + + ++ PPK + + + + S+A R RRE ISER++ LQ +VPG +
Sbjct: 336 ACGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCS 395
Query: 199 KM-DTASMLDEAIHYVKFLKKQVHTL 223
K+ A MLDE I+YV+ L++QV L
Sbjct: 396 KVTGKAVMLDEIINYVQSLQRQVEFL 421
>gi|332801231|gb|AEE99257.1| anthocyanin 1a [Nicotiana tabacum]
Length = 671
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 152 IDPESIKPPKRRNVKISKDPQ-----SVAARHRREMISERIRILQRIVPGGTKMDTASML 206
+D S R+ I+ + +A R RRE ++ER IL+ +VP TKMD AS+L
Sbjct: 451 VDSSSTASRFRKGCSITSQEEPSGNHVLAERRRREKLNERFIILRSLVPFVTKMDKASIL 510
Query: 207 DEAIHYVKFLKKQVHTLE 224
+ I YVK L+K+V LE
Sbjct: 511 GDTIEYVKQLRKKVQDLE 528
>gi|356563476|ref|XP_003549988.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 341
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE IS+++ L ++P KMD S+L EAI YVK LK+QV LE+ +
Sbjct: 158 IAERMRREKISQKLIALSALIPDLKKMDKVSVLGEAIRYVKQLKEQVKVLEEQSKRKNEE 217
Query: 234 GVGF 237
V F
Sbjct: 218 SVVF 221
>gi|332801235|gb|AEE99259.1| anthocyanin 1-like protein [Nicotiana sylvestris]
Length = 671
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 152 IDPESIKPPKRRNVKISKDPQ-----SVAARHRREMISERIRILQRIVPGGTKMDTASML 206
+D S R+ I+ + +A R RRE ++ER IL+ +VP TKMD AS+L
Sbjct: 451 VDSSSTASRFRKGCSITSQEEPSGNHVLAERRRREKLNERFIILRSLVPFVTKMDKASIL 510
Query: 207 DEAIHYVKFLKKQVHTLE 224
+ I YVK L+K+V LE
Sbjct: 511 GDTIEYVKQLRKKVQDLE 528
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+ +LQ +VPG ++ A MLDE I+YV+ L++QV L
Sbjct: 203 DSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFL 257
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 248 DSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 302
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 157 IKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
++PP+ R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I
Sbjct: 185 VEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 244
Query: 211 HYVKFLKKQVHTL 223
+YV+ L++QV L
Sbjct: 245 NYVQSLQRQVEFL 257
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 175 SLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 226
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 159 PPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIH 211
PPK + + + + S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+
Sbjct: 317 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIIN 376
Query: 212 YVKFLKKQVHTL 223
YV+ L++QV L
Sbjct: 377 YVQSLQRQVEFL 388
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 265 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 316
>gi|332801233|gb|AEE99258.1| anthocyanin 1b [Nicotiana tabacum]
Length = 683
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 152 IDPESIKPPKRRNVKISKDPQ-----SVAARHRREMISERIRILQRIVPGGTKMDTASML 206
+D S R+ I+ + +A R RRE ++ER IL+ +VP TKMD AS+L
Sbjct: 462 VDSSSTASRFRKGCSITSQEEPSGNHVLAERRRREKLNERFIILRSLVPFVTKMDKASIL 521
Query: 207 DEAIHYVKFLKKQVHTLEQAGAH 229
+ I YVK L K+V LE H
Sbjct: 522 GDTIEYVKQLHKKVQDLEARARH 544
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 158 KPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIH 211
+PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I+
Sbjct: 244 EPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 303
Query: 212 YVKFLKKQVHTL 223
YV+ L++QV L
Sbjct: 304 YVQSLQRQVEFL 315
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 73 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 127
>gi|332801237|gb|AEE99260.1| anthocyanin 1-like protein [Nicotiana tomentosiformis]
Length = 683
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 152 IDPESIKPPKRRNVKISKDPQ-----SVAARHRREMISERIRILQRIVPGGTKMDTASML 206
+D S R+ I+ + +A R RRE ++ER IL+ +VP TKMD AS+L
Sbjct: 462 VDSSSTASRFRKGCSITSQEEPSGNHVLAERRRREKLNERFIILRSLVPFVTKMDKASIL 521
Query: 207 DEAIHYVKFLKKQVHTLEQAGAH 229
+ I YVK L K+V LE H
Sbjct: 522 GDTIEYVKQLHKKVQDLEARARH 544
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S +P +R + + + +++ R RR+ I+E++R LQ +VP K D AS+LDEAI Y+K
Sbjct: 318 SKRPAAKRRTR-AAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKS 376
Query: 216 LKKQVHTLEQA---------GAHRPM--GGVGFQGAPMAGVAYPSL 250
L+ QV + G H+ M G+G A M G L
Sbjct: 377 LQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACMPGAQAQGL 422
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
P+S+A R RR ISERIR LQ +VP K +TA MLD A+ Y+K L+KQV L + A+
Sbjct: 332 PRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLNDSRAN 391
>gi|115453363|ref|NP_001050282.1| Os03g0391700 [Oryza sativa Japonica Group]
gi|40539023|gb|AAR87280.1| expressed protein (with alternative splicing) [Oryza sativa
Japonica Group]
gi|108708576|gb|ABF96371.1| expressed protein [Oryza sativa Japonica Group]
gi|108708577|gb|ABF96372.1| expressed protein [Oryza sativa Japonica Group]
gi|113548753|dbj|BAF12196.1| Os03g0391700 [Oryza sativa Japonica Group]
gi|215686766|dbj|BAG89616.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 315
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ RRE I E + L++IVPGG D ++LDEAI Y+K+LK +V TL
Sbjct: 264 KRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTL 310
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 157 IKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
++PP+ R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I
Sbjct: 185 VEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 244
Query: 211 HYVKFLKKQVHTL 223
+YV+ L++QV L
Sbjct: 245 NYVQSLQRQVEFL 257
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 183 DSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQVEFL 237
>gi|356534418|ref|XP_003535752.1| PREDICTED: transcription factor ABORTED MICROSPORES-like [Glycine
max]
Length = 571
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 161 KRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
+RRN K ++ VA R RR+ +++R+ L+ +VP +K+D AS+L +AI YVK L+KQV
Sbjct: 324 RRRNGKGNQSKNLVAERKRRKKLNDRLYNLRSLVPRISKLDRASILGDAIEYVKDLQKQV 383
Query: 221 HTLE 224
L+
Sbjct: 384 KELQ 387
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R LQ +VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 146 DSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQNQVEFL 200
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 36 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 90
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGA 228
P+S+A R RR ISERIR LQ +VP K +TA MLD A+ Y+K L+KQV L + A
Sbjct: 328 PRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLNDSRA 386
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 139 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 193
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|389827986|gb|AFL02463.1| transcription factor bHLH3 [Fragaria x ananassa]
Length = 697
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+K++ LE H
Sbjct: 477 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIKDLEARNVH 532
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGA 228
P+S+A R RR ISER+R LQ + P K +TA MLD A+ Y+K L+KQV TL+ A
Sbjct: 360 PRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQVKTLKDTKA 418
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 203 DSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFL 257
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG TK+ A MLDE I+YV+ L++QV L
Sbjct: 271 SLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFL 322
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 159 PPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIH 211
PPK + + + + S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+
Sbjct: 399 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 458
Query: 212 YVKFLKKQVHTL 223
YV+ L++QV L
Sbjct: 459 YVQSLQRQVEFL 470
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 158 KPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIH 211
+PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I+
Sbjct: 272 EPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 331
Query: 212 YVKFLKKQVHTL 223
YV+ L++QV L
Sbjct: 332 YVQSLQRQVEFL 343
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 160 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 214
>gi|222625055|gb|EEE59187.1| hypothetical protein OsJ_11123 [Oryza sativa Japonica Group]
Length = 359
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ RRE I E + L++IVPGG D ++LDEAI Y+K+LK +V TL
Sbjct: 308 KRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTL 354
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 188 SLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEFL 239
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE I ER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 308 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 362
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 268 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 319
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE I ER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 310 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 364
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RR I+ER+R LQ IVPG K M A+MLDE I+YV+ L+ QV L
Sbjct: 157 DSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQNQVELL 211
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 260 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 311
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 147 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 201
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 160 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 214
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 42 DSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQVEFL 96
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 158 KPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIH 211
+PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I+
Sbjct: 269 EPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 328
Query: 212 YVKFLKKQVHTL 223
YV+ L++QV L
Sbjct: 329 YVQSLQRQVEFL 340
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 143 RIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-D 201
R+A M+ ++ S+ R + P+S+A R RR IS RI+ LQ + P K
Sbjct: 342 RMATMEKLYQIQGSVPCKIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTS 401
Query: 202 TASMLDEAIHYVKFLKKQVHTLEQAGA 228
TA MLD A+ Y+K L+KQV L A
Sbjct: 402 TADMLDLAVEYIKDLQKQVKILRDTRA 428
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 138 DSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFL 192
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 260 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 311
>gi|218192968|gb|EEC75395.1| hypothetical protein OsI_11883 [Oryza sativa Indica Group]
Length = 414
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ RRE I E + L++IVPGG D ++LDEAI Y+K+LK +V TL
Sbjct: 363 KRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTL 409
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+ +LQ +VPG ++ A MLDE I+YV+ L++QV L
Sbjct: 200 DSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFL 254
>gi|449438279|ref|XP_004136916.1| PREDICTED: transcription factor bHLH25-like [Cucumis sativus]
gi|449511253|ref|XP_004163905.1| PREDICTED: transcription factor bHLH25-like [Cucumis sativus]
Length = 340
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +S+R L IVPG KMD AS+L +AI Y+K L+++V LE+ + +
Sbjct: 174 LAERRRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIE 233
Query: 234 GVGF 237
V F
Sbjct: 234 SVVF 237
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISER+R LQ +VP K +T+ MLD A+ Y+K L+KQV TL
Sbjct: 229 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKTL 282
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 157 IKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
++PPK R + D S+A R RRE IS+R++ LQ +VPG K + A MLDE I
Sbjct: 176 VEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEII 235
Query: 211 HYVKFLKKQVHTL 223
+YV+ L++QV L
Sbjct: 236 NYVQSLQRQVEFL 248
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 258 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 309
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISERIR LQ +VP K +TA MLD A+ Y+K L+KQV L
Sbjct: 329 PRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVL 382
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 159 PPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIH 211
PPK + + + + S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+
Sbjct: 294 PPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 353
Query: 212 YVKFLKKQVHTL 223
YV+ L++QV L
Sbjct: 354 YVQSLQRQVEFL 365
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS+R+++LQ +VPG K + A MLDE I+YV+ L++QV L
Sbjct: 83 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 137
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RR I+ER++ LQ IVPG K M A+MLDE I+YV+ L+ QV L
Sbjct: 156 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 210
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 152 IDPESIKPPKRRNVKISK----DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASML 206
I+ E KP + +V+ + D S+A R RR I+ER+R LQ IVPG K M A ML
Sbjct: 134 IEKEDEKPREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVML 193
Query: 207 DEAIHYVKFLKKQVHTL 223
DE I+YV+ L+ QV L
Sbjct: 194 DEIINYVQSLQNQVEFL 210
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE I ER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 310 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 364
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISERIR LQ +VP K +TA MLD A+ Y+K L+KQV L
Sbjct: 328 PRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVL 381
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RR I+ER++ LQ IVPG K M A+MLDE I+YV+ L+ QV L
Sbjct: 156 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 210
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 253 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 304
>gi|242037067|ref|XP_002465928.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
gi|241919782|gb|EER92926.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
Length = 287
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 172 QSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
Q AAR RR+ ISE+ L R++PG K++TA ML+EA +VK L+ QV L
Sbjct: 155 QKSAARQRRKRISEKTAELARLIPGAHKLNTAEMLEEAARHVKLLQAQVGVL 206
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISER+R LQ + P K +TA MLD A+ Y+K L+KQV TL
Sbjct: 343 PRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQVKTL 396
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 381 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 432
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 263 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFL 317
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++Q+ L
Sbjct: 78 DSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEFL 132
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 144 IAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DT 202
+AAM+ +S+ R + P+S+A R RR ISER+R LQ +VP K +T
Sbjct: 315 MAAMEKFLHFSDSVPMKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNT 374
Query: 203 ASMLDEAIHYVKFLKKQVHTLEQAGA 228
A MLD A+ Y+K L+KQ L+ A
Sbjct: 375 ADMLDLAVDYIKDLQKQAQKLQDCQA 400
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISER+R LQ + P K +TA MLD A+ Y+K L+KQV TL
Sbjct: 181 PRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQVKTL 234
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 156 SIKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEA 209
+ +PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE
Sbjct: 164 AAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEI 223
Query: 210 IHYVKFLKKQVHTL 223
I+YV+ L++QV L
Sbjct: 224 INYVQSLQQQVEFL 237
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 225 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFL 279
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 269 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 320
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 156 SIKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEA 209
+ +PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE
Sbjct: 164 AAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEI 223
Query: 210 IHYVKFLKKQVHTL 223
I+YV+ L++QV L
Sbjct: 224 INYVQSLQQQVEFL 237
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 155 ESIKPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLD 207
+S PPK + + + + S+A R RRE ISER++ LQ +VPG K+ A MLD
Sbjct: 290 QSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 349
Query: 208 EAIHYVKFLKKQVHTL 223
E I+YV+ L++QV L
Sbjct: 350 EIINYVQSLQRQVEFL 365
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 155 ESIKPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLD 207
+S PPK + + + + S+A R RRE ISER++ LQ +VPG K+ A MLD
Sbjct: 291 QSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 350
Query: 208 EAIHYVKFLKKQVHTL 223
E I+YV+ L++QV L
Sbjct: 351 EIINYVQSLQRQVEFL 366
>gi|356503537|ref|XP_003520564.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 577
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+A RHRRE ++ER IL+ +VP T+MD AS+L + I Y+K L+ ++ +LE
Sbjct: 420 MAERHRREKLNERFLILRSMVPSVTRMDKASILGDTIEYIKQLRDKIESLE 470
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L+ QV + PM
Sbjct: 312 LSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSMGCGMVPM 370
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
+ + S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 636 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 692
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L+ QV + PM
Sbjct: 308 LSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSMGCGMVPM 366
>gi|255549295|ref|XP_002515701.1| DNA binding protein, putative [Ricinus communis]
gi|223545138|gb|EEF46648.1| DNA binding protein, putative [Ricinus communis]
Length = 244
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 167 ISKDPQSVAARHR-REMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+S +P R R R+ + ++ RILQ+++P +MDTA+ML EA +Y+ FL+ QV L+
Sbjct: 100 LSSNPSQKNKRQRCRQTMGDKFRILQKLMPWDKRMDTATMLAEAYNYINFLQAQVKALQ 158
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
R RR+ I++R++ LQ++VP +K D ASMLDE I Y+K L+ QV + +
Sbjct: 293 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSR 341
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++Q+ L
Sbjct: 82 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFL 136
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 161 KRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
+RR ++ +++ R RR+ I+E++R LQ +VP K D ASMLDEAI Y+K L+ Q+
Sbjct: 235 RRRAAQV----HNLSERRRRDRINEKMRALQELVPHCNKTDKASMLDEAIEYLKSLQLQL 290
Query: 221 HTLEQAGA 228
+ G
Sbjct: 291 QVMWAMGG 298
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 155 ESIKPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLD 207
+S PPK + + + + S+A R RRE ISER++ LQ +VPG K+ A MLD
Sbjct: 291 QSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 350
Query: 208 EAIHYVKFLKKQVHTL 223
E I+YV+ L++QV L
Sbjct: 351 EIINYVQSLQRQVEFL 366
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 159 PPKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
PP R + K S+ + +++ + RR I+E+++ LQ ++P K D ASMLDEAI Y+K L
Sbjct: 115 PPPRSSSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQL 174
Query: 217 KKQVHTL 223
+ QV L
Sbjct: 175 QLQVQYL 181
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S +P +R + + + +++ R RR+ I+E++R LQ +VP K D AS+LDEAI Y+K
Sbjct: 394 SKRPAAKRRTR-AAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKS 452
Query: 216 LKKQVHTLEQA---------GAHRPM--GGVGFQGAPMAGVAYPSL 250
L+ QV + G H+ M G+G A M G L
Sbjct: 453 LQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACMPGAQAQGL 498
>gi|77557141|gb|ABA99937.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 338
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA-GAHRP 231
+A R RRE I++R L ++PG KMD A++L +A+ YVK L+++V TLE+ G RP
Sbjct: 170 IAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEEDGGGRP 228
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 156 SIKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEA 209
+++PPK R + D S+A R RRE IS+R++ LQ +VPG K + A MLDE
Sbjct: 147 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 206
Query: 210 IHYVKFLKKQVHTL 223
I+YV+ L++QV L
Sbjct: 207 INYVQSLQQQVEFL 220
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGA 228
P+S+A R RR ISERIR LQ +VP K +T+ MLD A+ Y+K L+KQV L ++ A
Sbjct: 204 PRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQVKALNESRA 262
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG +K + A MLDE I+YV+ L++QV L
Sbjct: 277 SLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFL 328
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 253 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 304
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 156 SIKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEA 209
+++PPK R + D S+A R RRE IS+R++ LQ +VPG K + A MLDE
Sbjct: 147 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 206
Query: 210 IHYVKFLKKQVHTL 223
I+YV+ L++QV L
Sbjct: 207 INYVQSLQQQVEFL 220
>gi|125580175|gb|EAZ21321.1| hypothetical protein OsJ_36975 [Oryza sativa Japonica Group]
Length = 338
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA-GAHRP 231
+A R RRE I++R L ++PG KMD A++L +A+ YVK L+++V TLE+ G RP
Sbjct: 170 IAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEEDGGGRP 228
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 156 SIKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEA 209
+++PPK R + D S+A R RRE IS+R++ LQ +VPG K + A MLDE
Sbjct: 147 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 206
Query: 210 IHYVKFLKKQVHTL 223
I+YV+ L++QV L
Sbjct: 207 INYVQSLQQQVEFL 220
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 194 DRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 248
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
+ D S+A R RRE IS+R+++LQ +VPG K + A MLDE I+YV+ L++QV L
Sbjct: 287 ATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 343
>gi|355320016|emb|CBY88797.1| basic helix-loop-helix transcription factor [Humulus lupulus]
Length = 695
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+K+V LE
Sbjct: 479 MAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKVQDLE 529
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISERIR LQ +VP K +TA MLD A+ Y+K L+KQV L
Sbjct: 307 PRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVL 360
>gi|125544694|gb|EAY90833.1| hypothetical protein OsI_12438 [Oryza sativa Indica Group]
Length = 263
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R + + P++ ++E + + +R L+ I+PGG +MDT ++LDEA+ Y+K LK +V
Sbjct: 195 RSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVK 254
Query: 222 TLEQAGA 228
L G+
Sbjct: 255 KLGARGS 261
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 158 KPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIH 211
+PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I+
Sbjct: 262 EPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 321
Query: 212 YVKFLKKQVHTL 223
YV+ L++QV L
Sbjct: 322 YVQSLQRQVEFL 333
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 158 KPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAI 210
+PPK+ + + + D S+A R RRE ISER++ LQ +VPG +K+ A MLDE I
Sbjct: 7 EPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 66
Query: 211 HYVKFLKKQVHTL 223
+YV+ L++QV L
Sbjct: 67 NYVQSLQRQVEFL 79
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 156 SIKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEA 209
+++PPK R + D S+A R RRE IS+R++ LQ +VPG K + A MLDE
Sbjct: 147 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 206
Query: 210 IHYVKFLKKQVHTL 223
I+YV+ L++QV L
Sbjct: 207 INYVQSLQQQVEFL 220
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 175 AARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGG 234
+ R RR+ I+E++R LQ+++P K D ASML+EAI Y+K L+ Q+ + P+
Sbjct: 368 SERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVMWMGSGMTPVMF 427
Query: 235 VGFQ------GAPMAGVAYPSL 250
G Q G M + PS+
Sbjct: 428 PGIQHYMSQMGMGMGAPSLPSI 449
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 158 KPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIH 211
+PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I+
Sbjct: 256 EPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 315
Query: 212 YVKFLKKQVHTL 223
YV+ L++QV L
Sbjct: 316 YVQSLQRQVEFL 327
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 158 KPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIH 211
+PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I+
Sbjct: 256 EPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 315
Query: 212 YVKFLKKQVHTL 223
YV+ L++QV L
Sbjct: 316 YVQSLQRQVEFL 327
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RR I+ER++ LQ IVPG K M A+MLDE I+YV+ L+ QV L
Sbjct: 158 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 212
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RR I+ER++ LQ IVPG K M A+MLDE I+YV+ L+ QV L
Sbjct: 145 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 199
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Query: 145 AAMQPIHIDPESIKPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGT 198
A+ + + ++ PPK + + + + S+A R RRE ISER++ LQ +VPG +
Sbjct: 199 ASGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCS 258
Query: 199 KM-DTASMLDEAIHYVKFLKKQVHTL 223
K+ A MLDE I+YV+ L++QV L
Sbjct: 259 KVTGKAVMLDEIINYVQSLQRQVEFL 284
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 156 SIKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEA 209
+++PPK R + D S+A R RRE IS+R++ LQ +VPG K + A MLDE
Sbjct: 146 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 205
Query: 210 IHYVKFLKKQVHTL 223
I+YV+ L++QV L
Sbjct: 206 INYVQSLQQQVEFL 219
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 156 SIKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEA 209
+++PPK R + D S+A R RRE IS+R++ LQ +VPG K + A MLDE
Sbjct: 146 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 205
Query: 210 IHYVKFLKKQVHTL 223
I+YV+ L++QV L
Sbjct: 206 INYVQSLQQQVEFL 219
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 21/90 (23%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASM-LDEAIHYVKFLKKQVHTLE---- 224
D S+A R RRE ISER+R+LQ +VPG K+ +M LDE I+YV+ L+ QV L
Sbjct: 140 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQVEFLSMRIA 199
Query: 225 ------------QAGAHR----PMGGVGFQ 238
G H MGGV FQ
Sbjct: 200 SMSPVLYGFGTNSEGLHDHHAPKMGGVSFQ 229
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 194 DRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 248
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 155 ESIKPPKRRNVKI---SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIH 211
E KP +R K + + +++ R RR+ I+E++R LQ ++P K D AS+LDE I
Sbjct: 309 EETKPSRRYGTKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIE 368
Query: 212 YVKFLKKQVHTLEQAGAHRPM 232
Y+K L+ QV + PM
Sbjct: 369 YLKSLQMQVQIMWMTSGMAPM 389
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 82/181 (45%), Gaps = 17/181 (9%)
Query: 54 NSNISTQPIYHN-----PNNYVSSPPPTF-TNPSSSLPLFINTTTPVQEPMTPPLHQPNN 107
NSN+ST HN + ++ P F N + P +N P++ P+ Q N
Sbjct: 45 NSNLST---MHNLVPFSCDTFLGPQEPEFPGNLEENFPALVNHNAL---PVSLPIFQAEN 98
Query: 108 VVTGGRLKTS--LPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHIDPESIKPPK--RR 163
+ G+ + S LP S T S + ++ R ++ + E K R
Sbjct: 99 EIHEGKKRKSVDLPETSSANSTPAVSESGSKIKHSSGRGKRVKSNVTEEEKAKEVVHVRA 158
Query: 164 NVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHT 222
+ D S+A R RR I+E++R LQ IVPG K M A MLDE I+YV+ L+ QV
Sbjct: 159 RRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEF 218
Query: 223 L 223
L
Sbjct: 219 L 219
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
+++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L+ QV + PM
Sbjct: 282 NLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPM 341
Query: 233 GGVGFQ 238
G Q
Sbjct: 342 IFPGIQ 347
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 315 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 366
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 155 ESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVK 214
E+++P + + +++ + RR I+E+++ LQ ++P K D ASMLDEAI Y+K
Sbjct: 113 ETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLK 172
Query: 215 FLKKQVHTL 223
L+ QV L
Sbjct: 173 QLQLQVQML 181
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG K+ A MLDE I+Y++ L++QV L
Sbjct: 60 SLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEFL 111
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 158 KPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
+PPK+ + + + D S+A R RRE ISER++ILQ +VPG K + A +LDE I
Sbjct: 84 EPPKQDYIHVRARRGQATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALVLDEII 143
Query: 211 HYVKFLKKQVHTL 223
+Y++ L++QV L
Sbjct: 144 NYIQSLQQQVEFL 156
>gi|255559476|ref|XP_002520758.1| conserved hypothetical protein [Ricinus communis]
gi|223540143|gb|EEF41720.1| conserved hypothetical protein [Ricinus communis]
Length = 668
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+K++ LE
Sbjct: 483 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 533
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGA 228
P+S+A R RR ISERIR LQ +VP K +T+ MLD A+ Y+K L+KQV L ++ A
Sbjct: 327 PRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKALNESRA 385
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 177 DRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 231
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 194 DRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 248
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG +K + A MLDE I+YV+ L++QV L
Sbjct: 275 SLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFL 326
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASM-LDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ ++ LDE I+YVK L+ QV L
Sbjct: 117 DSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSLQNQVEFL 171
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 143 RIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-D 201
R+A M+ + S+ R + P+S+A R RR IS RI+ LQ + P K
Sbjct: 338 RVATMEKFYQIQGSVPCKIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTS 397
Query: 202 TASMLDEAIHYVKFLKKQVHTLEQAGA 228
TA MLD A+ Y+K L+KQV L A
Sbjct: 398 TADMLDLAVEYIKDLQKQVKMLRDTRA 424
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISERIR LQ +VP K TA MLD A+ Y+K L+KQ TL
Sbjct: 313 PRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQFKTL 366
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 194 DRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 248
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE I ER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 265 DSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 319
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 158 KPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIH 211
+PPK R + D S+A R RRE IS+R+++LQ +VPG K + A MLDE I+
Sbjct: 271 EPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 330
Query: 212 YVKFLKKQVHTL 223
YV+ L++QV L
Sbjct: 331 YVQSLQRQVEFL 342
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG +K + A MLDE I+YV+ L++QV L
Sbjct: 275 SLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFL 326
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 144 IAAMQPIHIDP---ESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM 200
I+ M +++D +S+ R + P+S+A R RR IS+RIR LQ +VP K
Sbjct: 161 ISGMMDMNMDKIFEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQ 220
Query: 201 -DTASMLDEAIHYVKFLKKQVHTL 223
+TA ML+EA+ YVK L+ Q+ L
Sbjct: 221 TNTADMLEEAVEYVKALQSQIQEL 244
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+++ R RR+ I+ER++ LQ ++P K D ASMLDEAI Y+K L+ Q+ +
Sbjct: 14 NLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQVV 64
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 180 DSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 234
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 145 AAMQPIHIDPESIKPPKRRNVKISKDPQS-----VAARHRREMISERIRILQRIVPGGTK 199
A+ + +D E +R + SK ++ ++ R RR+ I+E++R LQ ++P K
Sbjct: 92 ASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK 151
Query: 200 MDTASMLDEAIHYVKFLKKQVHTL 223
+D ASML+EAI Y+K L+ QV +
Sbjct: 152 IDKASMLEEAIEYLKTLQLQVQMM 175
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 145 AAMQPIHIDPESIKPPKRRNVKISKDPQS-----VAARHRREMISERIRILQRIVPGGTK 199
A+ + +D E +R + SK ++ ++ R RR+ I+E++R LQ ++P K
Sbjct: 308 ASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK 367
Query: 200 MDTASMLDEAIHYVKFLKKQVHTL 223
+D ASML+EAI Y+K L+ QV +
Sbjct: 368 IDKASMLEEAIEYLKTLQLQVQMM 391
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 145 AAMQPIHIDPESIKPPKRRNVKISKDPQS-----VAARHRREMISERIRILQRIVPGGTK 199
A+ + +D E +R + SK ++ ++ R RR+ I+E++R LQ ++P K
Sbjct: 308 ASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK 367
Query: 200 MDTASMLDEAIHYVKFLKKQVHTL 223
+D ASML+EAI Y+K L+ QV +
Sbjct: 368 IDKASMLEEAIEYLKTLQLQVQMM 391
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS+R++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 362 DSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 416
>gi|47232560|dbj|BAD18983.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
gi|47232562|dbj|BAD18984.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
Length = 670
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+++V LE A
Sbjct: 475 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRVQELEAA 527
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RR+ ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 256 DSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFL 310
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 148 QPIHIDPESIKPPKRRNVKISKDPQSVAA-------RHRREMISERIRILQRIVPGGTKM 200
Q +D ES + ++N+ S +S AA R RR+ I+E+++ LQ ++P K
Sbjct: 234 QSEDVDFESAE--AKKNISGSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS 291
Query: 201 DTASMLDEAIHYVKFLKKQVHTLE 224
D ASMLDEAI Y+K L+ QV ++
Sbjct: 292 DKASMLDEAIDYLKSLQLQVQRVQ 315
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGA 228
P+S+A R RR ISERIR LQ +VP K +T+ MLD A+ Y+K L+KQV L ++ A
Sbjct: 307 PRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQVKALNESRA 365
>gi|242073170|ref|XP_002446521.1| hypothetical protein SORBIDRAFT_06g017460 [Sorghum bicolor]
gi|241937704|gb|EES10849.1| hypothetical protein SORBIDRAFT_06g017460 [Sorghum bicolor]
Length = 345
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 159 PPKRRNV-----KISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
PP RR V I +A R RRE I++R L ++PG KMD A++L +A YV
Sbjct: 131 PPTRRAVLKTVGSIYAQDHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDATRYV 190
Query: 214 KFLKKQVHTLEQAGA 228
K L++++ TLE G
Sbjct: 191 KELQEKLKTLEDDGG 205
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGA 228
P+S+A R RR ISERIR LQ +VP K +T+ MLD A+ Y+K L+KQV L ++ A
Sbjct: 307 PRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQVKALNESRA 365
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQ 225
P+S+A R RR ISER+R LQ +VP K +T+ MLD A+ Y+K L++QV TL +
Sbjct: 349 PRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQVETLSE 404
>gi|163311834|gb|ABY26930.1| putative anthocyanin transcriptional regulator [Ipomoea alba]
Length = 671
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGA 228
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L++++ LE A A
Sbjct: 476 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARA 530
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++Q+ L
Sbjct: 85 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFL 139
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISER+R LQ +VP K +TA MLD A+ Y+K L+KQ TL
Sbjct: 292 PRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQFKTL 345
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 175 AARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
+ R RR+ I++R++ LQ++VP +K D ASMLDE I Y+K L+ QV + +
Sbjct: 278 SERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMNR 328
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
R RR+ I+E++R LQ +VP K D AS+LDEAI Y+K L+ QV + + PM
Sbjct: 258 RRRRDRINEKMRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMSTGMAPM 313
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P PP R + S + + + R RR+ I+E+++ LQ ++P TK D SMLDEAI Y+
Sbjct: 7 PRRSTPPTTRRSR-SAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYL 65
Query: 214 KFLKKQVHTL 223
K L+ Q+ L
Sbjct: 66 KSLQLQLQML 75
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
Query: 158 KPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAI 210
+PPK+ + + + D S+A R RRE ISER++ILQ +VPG K + A +LDE I
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 178
Query: 211 HYVKFLKKQVHTL 223
+Y++ L++QV L
Sbjct: 179 NYIQSLQRQVEFL 191
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 144 IAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DT 202
+AA++ +S+ R + P+S+A R RR ISER+R LQ +VP K +T
Sbjct: 338 LAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNT 397
Query: 203 ASMLDEAIHYVKFLKKQVHTL 223
+ MLD A+ Y+K L+ QV TL
Sbjct: 398 SDMLDLAVEYIKDLQNQVETL 418
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+++ R RR+ I+ER++ LQ ++P K D ASMLDEAI Y+K L+ Q+ +
Sbjct: 14 NLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQVV 64
>gi|168015644|ref|XP_001760360.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688374|gb|EDQ74751.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 542
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
+A R RRE +S+R L IVPG KMD AS+L +AI YVK L++++ T+E+
Sbjct: 234 MAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYVKTLEEKLKTMEE 285
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 131 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQVEFL 185
>gi|414864593|tpg|DAA43150.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 290
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 172 QSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
Q+ AAR RR+ ISE+ L R++PG K++TA ML+EA +VK L+ QV L
Sbjct: 159 QNSAARQRRKRISEKTAELARLIPGANKLNTAEMLEEASRHVKLLQAQVGML 210
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 162 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 213
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 67 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 121
>gi|168041399|ref|XP_001773179.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675538|gb|EDQ62032.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 550
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 153 DPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHY 212
D E P+ +SK+ VA R RR+ ++ER+ L+ +VP TKMD AS+L +AI Y
Sbjct: 300 DDEEKGGPRSARRHLSKNL--VAERKRRKKLNERLYSLRALVPKITKMDRASILGDAIEY 357
Query: 213 VKFLKKQVHTLEQA---GAHRPMG--GVGF 237
VK L++QV L++ MG G+GF
Sbjct: 358 VKELQQQVKELQEELLDSKENDMGTAGLGF 387
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L+ QV L
Sbjct: 287 DSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFL 341
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
R RR+ I+E++R LQ ++P K+D ASML+EAI Y+K L+ QV + G
Sbjct: 279 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSSMG 329
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 180 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 234
>gi|37991892|gb|AAR06338.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 384
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R + + P++ ++E + + +R L+ I+PGG +MDT ++LDEA+ Y+K LK +V
Sbjct: 195 RSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVK 254
Query: 222 TL 223
L
Sbjct: 255 KL 256
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
R RR+ I++R++ LQ++VP +K D ASMLDE I Y+K L+ QV
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 144 DSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQVEFL 198
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
R RR+ I++R++ LQ++VP +K D ASMLDE I Y+K L+ QV
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R RR+ I+E+++ LQ++VP +K D ASMLDE I Y+K L+ QV
Sbjct: 271 RRRRDRINEKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQ 315
>gi|324022722|gb|ADY15317.1| transparent testa 8 [Prunus avium]
Length = 565
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+K++ LE
Sbjct: 423 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 473
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L+ QV L
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFL 321
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 134 DSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEFL 188
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ + PG K+ A MLDE I+YV+ L++QV L
Sbjct: 218 SLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVEFL 269
>gi|451953540|dbj|BAM84239.1| bHLH transcription factor [Dahlia pinnata]
Length = 651
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 28/177 (15%)
Query: 64 HNPNN---YVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTSLPS 120
HNP+N + S P FT S +L ++ + PLH + P
Sbjct: 368 HNPSNIQLHTSEFAPEFTRYSDTLSTILHKQSTQWSSSHTPLHHNS------------PQ 415
Query: 121 PSPYPPTLEKRNSMAA---------MREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDP 171
S P T + +S+ ++ ++F + + S R S +
Sbjct: 416 SSFTPWTSTRHHSLLLPSSTTSQRILKYILFTVPFLYTTTTTTTSDSIASRLRKTTSHEE 475
Query: 172 QS----VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
S +A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+ +V LE
Sbjct: 476 LSANHVLAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLRNKVQDLE 532
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 160 PKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
P R + K S+ + +++ + RR I+E+++ LQ ++P K D ASMLDEAI Y+K L+
Sbjct: 175 PSRSSTKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQ 234
Query: 218 KQVHTL 223
QV L
Sbjct: 235 LQVQML 240
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISER+R LQ +VP K +TA MLD A+ Y+K L+KQ TL
Sbjct: 281 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQYKTL 334
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RR I+ER+R LQ +VPG K M A+MLDE I+YV+ L+ QV L
Sbjct: 154 DSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 208
>gi|357476613|ref|XP_003608592.1| Transcription factor bHLH19 [Medicago truncatula]
gi|355509647|gb|AES90789.1| Transcription factor bHLH19 [Medicago truncatula]
Length = 328
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +S+R L I+PG KMD A++L++AI ++K L+++V TLE+ A + +
Sbjct: 158 IAERKRREKLSQRFIALSSILPGLKKMDKATILEDAIKHMKQLQERVKTLEEQVADKKVE 217
Query: 234 GVGF 237
F
Sbjct: 218 SAVF 221
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Query: 165 VKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
VK S++P+ +++ + RRE I++++R L+ ++P K+D ASMLD+AI Y+K LK Q+
Sbjct: 332 VKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKVDKASMLDDAIDYLKTLKLQL 389
>gi|357452535|ref|XP_003596544.1| Transcription factor bHLH123 [Medicago truncatula]
gi|355485592|gb|AES66795.1| Transcription factor bHLH123 [Medicago truncatula]
Length = 437
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 34/176 (19%)
Query: 65 NPNNYVSSPPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPY 124
N NN ++ P + ++ +P F T+P ++P LH NN +P+
Sbjct: 215 NSNNELNIMPASNNWSNNKVPQFFMRTSPPKQPTNNQLHFTNN--------------TPF 260
Query: 125 PPTLEKRNSMAAMREMIF-----------------RIAAMQPIHIDPESIKPPKRRNVKI 167
E NS+ +R F I+ + + P + RN
Sbjct: 261 WNASEAPNSVKDVRSTFFPSLQPQFSPSNFDSHSKNISEVSVVKKSGSEPAPKRTRNETP 320
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
S P A + R+E + +RI LQ++V K DTAS+L EAI Y+KFL +QV L
Sbjct: 321 STLP---AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVL 373
>gi|108709600|gb|ABF97395.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|125544695|gb|EAY90834.1| hypothetical protein OsI_12439 [Oryza sativa Indica Group]
gi|125586994|gb|EAZ27658.1| hypothetical protein OsJ_11606 [Oryza sativa Japonica Group]
gi|215678773|dbj|BAG95210.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 263
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R + + P++ ++E + + +R L+ I+PGG +MDT ++LDEA+ Y+K LK +V
Sbjct: 195 RSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVK 254
Query: 222 TL 223
L
Sbjct: 255 KL 256
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 161 KRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
+RR ++ +++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L+ Q+
Sbjct: 267 RRRAAEV----HNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQL 322
Query: 221 HTLEQAGAHRP 231
+ G P
Sbjct: 323 QMMWMGGGMAP 333
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 161 KRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
+RR ++ +++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L+ Q+
Sbjct: 267 RRRAAEV----HNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQL 322
Query: 221 HTLEQAGAHRP 231
+ G P
Sbjct: 323 QMMWMGGGMAP 333
>gi|356511998|ref|XP_003524708.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 336
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE IS++ L ++P KMD S+L EAI YVK LK+QV LE+ +
Sbjct: 152 IAERMRREKISQQFIALSALIPDLKKMDKVSLLGEAIRYVKQLKEQVKLLEEQSKRKNEE 211
Query: 234 GVGF 237
V F
Sbjct: 212 SVMF 215
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RR I+ER+R LQ IVPG K M A MLDE I+YV+ L+ QV L
Sbjct: 166 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFL 220
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASM-LDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ ++ LDE I+YVK L+ QV L
Sbjct: 117 DSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEFL 171
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ RR I+ER++ LQ++VPG +K + AS LD+ IHY+K L++QV +
Sbjct: 202 KRRRHKINERLKTLQKLVPGCSKSNQASTLDQTIHYMKSLQQQVQAM 248
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 56 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 110
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
++ R RR+ I+E++R LQ ++P K D ASMLDEAI Y+K L+ QV + MG
Sbjct: 340 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMW-------MG 392
Query: 234 GVGFQGAPMAGVAYPSLVKASHQMVDNINMQM 265
G P V +P + HQ + + + M
Sbjct: 393 SAGIAAPPA--VMFPGV----HQYLPRMGVGM 418
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 83 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 137
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 161 KRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
+RR ++ +++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L+ Q+
Sbjct: 276 RRRAAEV----HNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQL 331
Query: 221 HTLEQAGAHRP 231
+ G P
Sbjct: 332 QMMWMGGGMAP 342
>gi|225436998|ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis vinifera]
Length = 696
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+K++ LE
Sbjct: 492 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 542
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D +A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 160 DSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 214
>gi|327194899|gb|AEA34965.1| putative transcription factor BHLH2 [Ipomoea batatas]
Length = 667
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L++++ LE A
Sbjct: 475 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAA 527
>gi|184161316|gb|ACC68685.1| bHLH-like DNA binding protein [Vitis vinifera]
Length = 701
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+K++ LE
Sbjct: 497 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 547
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 150 IHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDE 208
+ + +S+ R + P+S+A R RR IS+R+R LQ +VP K +T+ MLD
Sbjct: 284 LQLQQDSVACRVRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDI 343
Query: 209 AIHYVKFLKKQVHTLEQ 225
A+ Y+K L+ Q+ L+Q
Sbjct: 344 AVDYIKVLQDQIEKLKQ 360
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
R RR+ I+E++R LQ ++P K+D ASML+EAI Y+K L+ QV + G
Sbjct: 334 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSTMG 384
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
R RR+ I+E++R LQ ++P K+D ASML+EAI Y+K L+ QV + G
Sbjct: 334 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSTMG 384
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
++ R RR+ I+E++R LQ ++P K D ASMLDEAI Y+K L+ QV + MG
Sbjct: 340 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMMW-------MG 392
Query: 234 GVGFQGAPMAGVAYPSLVKASHQMVDNINMQM 265
G P V +P + HQ + + + M
Sbjct: 393 SAGIAAPPA--VMFPGV----HQYLPRMGVGM 418
>gi|163311848|gb|ABY26937.1| putative anthocyanin transcriptional regulator [Ipomoea
hochstetteri]
Length = 683
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L++++ LE A
Sbjct: 488 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAA 540
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAG 227
R RR+ I+E++R LQ ++P K+D ASML+EAI Y+K L+ QV + G
Sbjct: 338 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSTMG 388
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P SI+P R + DP S+A R RRE I+ERIR LQ +VP K D A+M+DE + YV
Sbjct: 139 PTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYV 198
Query: 214 KFLKKQVHTLEQAGAHRPMGGVG 236
KFL+ QV L + +GGVG
Sbjct: 199 KFLRLQVKVLSMSR----LGGVG 217
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ++VPG ++ A +LDE I+YV+ L+ QV L
Sbjct: 154 DSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQVEFL 208
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P PP RR+ S + + + R RR+ I+E+++ LQ ++P K D SMLDEAI Y+
Sbjct: 7 PRRSTPPTRRSR--SAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYL 64
Query: 214 KFLKKQVHTL 223
K L+ Q+ L
Sbjct: 65 KSLQLQLQML 74
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 88 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 139
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S P RR+ S D + + R RR+ I+E+++ LQ ++P TK D SMLDEAI Y+K
Sbjct: 11 SSAPTTRRSR--SADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKS 68
Query: 216 LKKQVHTL 223
L+ Q+ L
Sbjct: 69 LQLQLQML 76
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RR+ ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 152 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 203
>gi|296086734|emb|CBI32369.3| unnamed protein product [Vitis vinifera]
Length = 620
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+K++ LE
Sbjct: 416 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 466
>gi|163311842|gb|ABY26934.1| putative anthocyanin transcriptional regulator [Ipomoea lacunosa]
Length = 669
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L++++ LE A
Sbjct: 477 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAA 529
>gi|147772652|emb|CAN62848.1| hypothetical protein VITISV_010152 [Vitis vinifera]
Length = 668
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+K++ LE
Sbjct: 464 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 514
>gi|163311840|gb|ABY26933.1| putative anthocyanin transcriptional regulator [Ipomoea trifida]
Length = 676
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L++++ LE A
Sbjct: 484 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAA 536
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R RR+ I++R++ LQ++VP +K D ASMLDE I Y+K L+ QV
Sbjct: 292 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 336
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHY 212
P+ I RR + D S+A R RRE ISER++ILQ + PG K + A +LDE I+Y
Sbjct: 109 PDYIHVRARRGQ--ATDSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDEIINY 166
Query: 213 VKFLKKQVHTL 223
++ L++QV L
Sbjct: 167 IQSLQRQVEFL 177
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 160 PKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQ 219
PKRR + + +++ R RR+ I+E++R LQ ++P K D AS+LDE I Y+K L+ Q
Sbjct: 225 PKRRTR--AAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQ 282
Query: 220 VHTLEQAGAHRPM 232
V + PM
Sbjct: 283 VQIMWMTSGMAPM 295
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 158 KPPKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
KP R + K S+ + +++ + RR I+E+++ LQ ++P K D ASMLDEAI Y+K
Sbjct: 163 KPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQ 222
Query: 216 LKKQVHTL 223
L+ QV L
Sbjct: 223 LQLQVQML 230
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RR+ ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 158 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 209
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 153 DPESIKPPKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAI 210
+P + + R+ K S+ + +++ R RR+ I+E++R LQ ++P K+D ASML+EAI
Sbjct: 245 EPGATRRSAARSAKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAI 304
Query: 211 HYVKFLKKQVHTL 223
Y+K L+ QV +
Sbjct: 305 EYLKTLQLQVQMM 317
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 131 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 185
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 118 DSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 172
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 130 DSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFL 184
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P PP RR+ S + + + R RR+ I+E+++ LQ ++P K D SMLDEAI Y+
Sbjct: 7 PRRSTPPARRSR--SAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYL 64
Query: 214 KFLKKQVHTL 223
K L+ Q+ L
Sbjct: 65 KSLQLQLQML 74
>gi|163311838|gb|ABY26932.1| putative anthocyanin transcriptional regulator [Ipomoea coccinea]
Length = 661
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L++++ LE A
Sbjct: 466 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAA 518
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RR+ ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 159 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 210
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RR I+ER+R LQ IVPG K M A MLDE I+YV+ L+ QV L
Sbjct: 165 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFL 219
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+E++R LQ ++P K D ASMLDEAI Y+K L+ QV +
Sbjct: 335 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMM 384
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE I+ER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 135 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFL 186
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 317 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFL 368
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 175 AARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ R RR+ I+E++R LQ ++P K D ASMLDEAI Y+K L+ Q+ +
Sbjct: 742 SERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIDYLKILQLQLQMM 790
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE I+ER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 640 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFL 691
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 120 DSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFL 174
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+E++R LQ ++P K D ASMLDEAI Y+K L+ Q+ +
Sbjct: 41 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVM 90
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE I+ER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 640 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFL 691
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
P+S+A R RR ISERIR LQ +VP K +TA MLD A+ Y+K L++QV + ++ A+
Sbjct: 310 PRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQVKVINESRAN 369
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 150 DRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFL 204
>gi|125537518|gb|EAY84006.1| hypothetical protein OsI_39237 [Oryza sativa Indica Group]
Length = 309
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHR 230
+A R RRE I++R L ++PG KMD A++L +A+ YVK L+++V TLE+ R
Sbjct: 167 IAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEEDGGR 223
>gi|45735905|dbj|BAD12937.1| bHLH transcription factor (bHLH123)-like protein [Oryza sativa
Japonica Group]
Length = 418
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
P S+AA+ R+E + +R+ LQ++V K DTAS+L E I Y+KFL QV L
Sbjct: 294 PASLAAKVRKEKLGDRVTALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGAL 346
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 156 SIKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEA 209
+++PPK R + D S+A R RRE IS+R++ LQ +VPG K + A MLDE
Sbjct: 146 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 205
Query: 210 IHYVKFLKKQVHTL 223
I+YV+ L++QV L
Sbjct: 206 INYVQSLQQQVEFL 219
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE I+ER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 137 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFL 188
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ RR I+ER++ LQ+IVPG +K + AS LD+ IHY+K L+ QV +
Sbjct: 186 KRRRHKINERLKTLQQIVPGCSKSNQASTLDQTIHYMKSLQHQVQAM 232
>gi|356536767|ref|XP_003536906.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 654
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L++++ LE
Sbjct: 466 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELE 516
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
++ R RR+ I+E++R LQ ++P K D AS+LDEAI Y+K L+ QV + PM
Sbjct: 227 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGMAPM 285
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 158 KPPKRRNVKISKDPQ--SVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
KP R + K S+ + +++ + RR I+E+++ LQ ++P K D ASMLDEAI Y+K
Sbjct: 163 KPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQ 222
Query: 216 LKKQVHTL 223
L+ QV L
Sbjct: 223 LQLQVQML 230
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 150 IHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDE 208
+ + +S+ R + P+S+A R RR IS+R+R LQ +VP K +T+ MLD
Sbjct: 289 LQLQQDSVACRVRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDI 348
Query: 209 AIHYVKFLKKQVHTLEQ 225
A+ Y+K L+ Q+ L+Q
Sbjct: 349 AVDYIKVLQDQIEKLKQ 365
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 258 SLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFL 309
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 156 SIKPPK-----RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEA 209
+++PPK R + D S+A R RRE IS+R++ LQ +VPG K + A MLDE
Sbjct: 148 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 207
Query: 210 IHYVKFLKKQVHTL 223
I+YV+ L++QV L
Sbjct: 208 INYVQSLQQQVEFL 221
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
++ R RR+ I+E++R LQ ++P K D ASMLDEAI Y+K L+ Q+
Sbjct: 24 LSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQ 71
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 270 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 321
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 265 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 316
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L+ QV L
Sbjct: 100 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFL 154
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+ER++ LQ ++P K D ASMLDEAI Y+K L+ Q+ +
Sbjct: 300 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQVM 349
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
++ R RR+ I+E++R LQ ++P K D AS+LDEAI Y+K L+ QV + PM
Sbjct: 238 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGMAPM 296
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 272 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 323
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 116 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 170
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 148 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 202
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 272 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 323
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 150 IHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDE 208
+ + P+S+ R + P+S+A R RR IS+R++ LQ +VP K +T+ MLD
Sbjct: 82 LQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDI 141
Query: 209 AIHYVKFLKKQVHTLEQAGAHRPMGG 234
A+ Y+K L+ QV L+ A+ G
Sbjct: 142 AVTYIKELQGQVEKLKHDQANCTCSG 167
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 129 DSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFL 183
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE I+ER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 640 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFL 691
>gi|356547454|ref|XP_003542127.1| PREDICTED: transcription factor bHLH19-like [Glycine max]
Length = 218
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHR 230
++ R RR++++ER L I+PG K+D AS+L EAI+YVK LK ++ LEQ +++
Sbjct: 46 MSERKRRQLMAERFIALSAIIPGLKKIDKASVLSEAINYVKQLKGRIAVLEQESSNK 102
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 120 DNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 174
>gi|302782295|ref|XP_002972921.1| hypothetical protein SELMODRAFT_34848 [Selaginella moellendorffii]
gi|300159522|gb|EFJ26142.1| hypothetical protein SELMODRAFT_34848 [Selaginella moellendorffii]
Length = 154
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 175 AARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGG 234
A R RRE +S+R L IVPG KMD AS+L +AI YVK L++++ +LE+ + + +
Sbjct: 5 AERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYVKQLQERLKSLEEHVSRKGVQS 64
Query: 235 VGF--QGAPMAG 244
V + + PM G
Sbjct: 65 VAYCKKSVPMHG 76
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR IS+RIR LQ +VP K +TA ML+EA+ YVK L+ Q+ L
Sbjct: 188 PRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQIQEL 241
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 120 DNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 174
>gi|224994136|dbj|BAH28881.1| bHLH transcription factor LjTT8 [Lotus japonicus]
Length = 678
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L++++ LE
Sbjct: 475 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELE 525
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
P+S+A R RR ISER+R LQ +VP K +T+ MLD A+ Y+K L++QV TL + A
Sbjct: 42 PRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQVQTLSEIRAR 101
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
++ R RR+ I+E++R LQ ++P K D AS+LDEAI Y+K L+ QV + PM
Sbjct: 327 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGMAPM 385
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 148 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 202
>gi|226530089|ref|NP_001140525.1| uncharacterized protein LOC100272590 [Zea mays]
gi|194699850|gb|ACF84009.1| unknown [Zea mays]
Length = 379
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
VA R RRE I++R L ++P KMD A++L +A YVK L++++ L+Q G+ G
Sbjct: 189 VAERKRREKINQRFIELSAVIPCLKKMDKATILSDATRYVKELQEKLKALQQGGSCNARG 248
Query: 234 GV 235
G
Sbjct: 249 GT 250
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 132 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 186
>gi|414871979|tpg|DAA50536.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 379
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
VA R RRE I++R L ++P KMD A++L +A YVK L++++ L+Q G+ G
Sbjct: 189 VAERKRREKINQRFIELSAVIPCLKKMDKATILSDATRYVKELQEKLKALQQGGSCNARG 248
Query: 234 GV 235
G
Sbjct: 249 GT 250
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV +
Sbjct: 10 QRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 56
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
R RR+ I+++++ LQ++VP +K D ASMLDE I Y+K L+ QV +
Sbjct: 257 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQAM 303
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RR+ ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 150 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 201
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
++ R RR+ I+E++R LQ ++P K D AS+LDEAI Y+K L+ QV + PM
Sbjct: 343 LSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGMAPM 401
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R RR+ I++R++ LQ++VP K D ASMLDE I Y+K L+ QV
Sbjct: 303 RKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHY 212
P+ I RR + D S+A R RRE IS++++ LQ +VPG K+ A MLDE I+Y
Sbjct: 185 PDYIHVRARRGQ--ATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINY 242
Query: 213 VKFLKKQVHTL 223
V+ L++QV L
Sbjct: 243 VQSLQRQVEFL 253
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASM-LDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ ++ LDE I+YVK L+ QV L
Sbjct: 51 DSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEFL 105
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 145 AAMQPIHIDPESIKPPKRRNVKISKDPQS-----VAARHRREMISERIRILQRIVPGGTK 199
A+ + +D E +R + SK ++ ++ R RR+ I+E++R LQ ++P K
Sbjct: 187 ASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK 246
Query: 200 MDTASMLDEAIHYVKFLKKQVHTL 223
+D ASML+EAI Y+K L+ QV +
Sbjct: 247 IDKASMLEEAIEYLKTLQLQVQMM 270
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R RR+ I++R++ LQ++VP K D ASMLDE I Y+K L+ QV
Sbjct: 303 RKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHY 212
P+ I RR + D S+A R RRE IS++++ LQ +VPG K+ A MLDE I+Y
Sbjct: 185 PDYIHVRARRGQ--ATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINY 242
Query: 213 VKFLKKQVHTL 223
V+ L++QV L
Sbjct: 243 VQSLQRQVEFL 253
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RR+ ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 43 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 94
>gi|326526363|dbj|BAJ97198.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 121 PSPYPPTLEKRNSMAAMREMIF------RIAAMQPIHIDPESIKPPKRRNVKISKDPQSV 174
P+ TL+ ++ A+ EM++ R AA P P S PP ++ +
Sbjct: 126 PASDDGTLDSGSAGPAVPEMVYGSQPTRRAAARSPTGTGPVSSGPPYAQD-------HIM 178
Query: 175 AARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQA 226
A R RRE I++R L ++PG KMD A++L +A +VK L++++ LE A
Sbjct: 179 AERKRREKINQRFIELSTVIPGLKKMDKATILSDATRHVKELQEKIKALEAA 230
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 161 KRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
KRR+ QS R RR+ I+E++R LQ ++P K D AS+LDEAI Y+K L+ QV
Sbjct: 202 KRRSRAAEVHNQS--ERRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQV 259
Query: 221 HTLEQAGAHRPM 232
+ PM
Sbjct: 260 QVMWMTSGMAPM 271
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 146 DRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFL 200
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 148 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 202
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 134 DRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFL 188
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 161 KRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
KRR+ QS R RR+ I+E++R LQ ++P K D AS+LDEAI Y+K L+ QV
Sbjct: 193 KRRSRAAEVHNQS--ERRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQV 250
Query: 221 HTLEQAGAHRPM 232
+ PM
Sbjct: 251 QVMWMTSGMAPM 262
>gi|4519201|dbj|BAA75514.1| MYC-GP [Perilla frutescens]
Length = 620
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 137 MREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSV------AARHRREMISERIRIL 190
+++++F +A M + ES K + + ++ V + R RRE ISER IL
Sbjct: 383 LKKVLFEVARMHE-NARIESAKQKDKCDDHSGQEADEVDRNHVLSERKRREKISERFSIL 441
Query: 191 QRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+VP G K+D S+LD I Y++ L+++V LE
Sbjct: 442 VSLVPSGGKVDKVSILDHTIEYLRELERKVKDLE 475
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASM-LDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ ++ LDE I+YVK L+ QV L
Sbjct: 117 DSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEFL 171
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 175 AARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ R RR+ I++R++ LQ++VP +K D ASMLDE I Y+K L+ QV +
Sbjct: 242 SERRRRDKINQRMKELQKLVPNSSKTDKASMLDEVIQYMKQLQAQVQMM 290
>gi|302812639|ref|XP_002988006.1| hypothetical protein SELMODRAFT_48361 [Selaginella moellendorffii]
gi|300144112|gb|EFJ10798.1| hypothetical protein SELMODRAFT_48361 [Selaginella moellendorffii]
Length = 162
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +S+R L IVPG KMD AS+L +AI YVK L++++ +LE+ + + +
Sbjct: 16 MAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYVKQLQERLKSLEEHVSRKGVQ 75
Query: 234 GVGF--QGAPMAG 244
V + + PM G
Sbjct: 76 SVAYCKKSVPMHG 88
>gi|4519199|dbj|BAA75513.1| MYC-RP [Perilla frutescens]
Length = 620
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 137 MREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSV------AARHRREMISERIRIL 190
+++++F +A M + ES K + + ++ V + R RRE ISER IL
Sbjct: 383 LKKVLFEVARMHE-NARIESAKQKDKCDDHSGQEADEVDRNHVLSERKRREKISERFSIL 441
Query: 191 QRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+VP G K+D S+LD I Y++ L+++V LE
Sbjct: 442 VSLVPSGGKVDKVSILDHTIEYLRELERKVKDLE 475
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RR+ ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 118 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 169
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
+ D S+A R RRE ISER+++LQ +VP K+ A MLDE I+YV+ L++QV L
Sbjct: 39 ATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQVEFL 95
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 261 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 312
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVH 221
R RR+ I++R++ LQ++VP +K D ASMLDE I Y+K L+ QV
Sbjct: 38 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 82
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L+ QV + P+
Sbjct: 315 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQVQMMSMGCGMVPVM 374
Query: 234 GVGFQ 238
G Q
Sbjct: 375 FPGIQ 379
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 329 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 380
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 176 ARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
A+ RR I+ER++ LQ++VPG +K + AS LD+ IHY+K L+ QV +
Sbjct: 222 AQRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQVQAM 269
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 134 DRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFL 188
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 150 DRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFL 204
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 380 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 431
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 150 DRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFL 204
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE-QAGAHRP 231
++ + RR I+E+++ LQ +VP +K D ASMLD+AI Y+K L+ QV L + G +RP
Sbjct: 57 LSEKRRRCKINEKMKALQSLVPNSSKTDKASMLDDAIEYLKHLQLQVQMLSMRNGVYRP 115
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQV 220
D S+A R RRE I ER+++LQ +VPG +K+ A MLDE I+YV+ L++QV
Sbjct: 265 DSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 316
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
+ D S+A R RRE ISER+++LQ +VPG K+ A MLDE I YV+ L+ QV L
Sbjct: 187 ATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFL 243
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 150 DRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFL 204
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
+ D S+A R RRE ISER+++LQ +VPG K+ A MLDE I YV+ L+ QV L
Sbjct: 187 ATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFL 243
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 150 DRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFL 204
>gi|4206118|gb|AAD11428.1| transporter homolog [Mesembryanthemum crystallinum]
Length = 300
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +++R L +VPG KMD AS+L +A Y+K L++QV LE+ A R +
Sbjct: 121 LAERKRREKMTQRFHALSALVPGLKKMDKASILGDAAKYLKQLEEQVKLLEEQTASRTVE 180
Query: 234 GV 235
V
Sbjct: 181 SV 182
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L+ QV + PM
Sbjct: 270 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGYGMVPMM 329
Query: 234 GVGFQ 238
G Q
Sbjct: 330 FPGIQ 334
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ RR I+ER + LQ+IVPG +K + AS LD+ IHY+K L+ QV +
Sbjct: 189 KRRRHKINERFKTLQQIVPGCSKSNQASTLDQTIHYMKSLQHQVQAM 235
>gi|356502813|ref|XP_003520210.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 646
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L++++ LE
Sbjct: 458 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELE 508
>gi|223702440|gb|ACN21651.1| putative basic helix-loop-helix protein BHLH15 [Lotus japonicus]
Length = 274
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 158 KPPKRRNVKISKDPQSVA-ARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFL 216
KPP ++ +++P S A+ R+E + ERI LQ++V K DTAS+L EA Y+KFL
Sbjct: 146 KPPYKKTK--AENPTSTGHAKKRKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIKFL 203
Query: 217 KKQVHTL 223
+ QV L
Sbjct: 204 QDQVQVL 210
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ RR I+ER++ LQ++VPG +K + AS LD+ IHY+K L+ QV +
Sbjct: 174 KRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQVQAM 220
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 150 IHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDE 208
+ + P+S+ R + P+S+A R RR IS+R++ LQ +VP K +T+ MLD
Sbjct: 145 LQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDI 204
Query: 209 AIHYVKFLKKQVHTLEQAGAHRPMGG 234
A+ Y+K L+ QV L+ A+ G
Sbjct: 205 AVTYIKELQGQVEKLKHDQANCTCSG 230
>gi|357512987|ref|XP_003626782.1| Transcription factor bHLH25 [Medicago truncatula]
gi|355520804|gb|AET01258.1| Transcription factor bHLH25 [Medicago truncatula]
Length = 332
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 154 PESIKPPKRRNVKISKDPQS--VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIH 211
P++IK + +N++ S + Q +A R RR+++SER L +PG K D A +L+EAI+
Sbjct: 125 PKTIKK-RTKNLRSSSEIQDHIMAERKRRQVLSERFIALSATIPGLKKTDKAYILEEAIN 183
Query: 212 YVKFLKKQVHTLE 224
YVK L+++V+ LE
Sbjct: 184 YVKQLQERVNELE 196
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
+ RR I+ER++ LQ++VPG +K + AS LD+ IHY+K L++QV +
Sbjct: 180 KRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQQQVQAM 226
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 144 IAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM-DT 202
+AA++ +S+ R + P+S+A R RR ISER+R LQ +VP K +T
Sbjct: 320 MAAIEKFLQLSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNT 379
Query: 203 ASMLDEAIHYVKFLKKQVHTL 223
A MLD A+ Y+K L+ QV L
Sbjct: 380 ADMLDLAVEYIKDLQNQVEAL 400
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 196 DRHSLAERARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFL 250
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISER+R LQ +VP K +TA MLD A+ Y+K L+KQ TL
Sbjct: 281 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQYKTL 334
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A + RRE ISER+++LQ +VPG +K+ A MLDE I+YV+ L++QV L
Sbjct: 160 SIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 211
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGA 228
P+S+A R RR ISERIR LQ +VP K +TA MLD A+ Y+K L++QV + ++ A
Sbjct: 317 PRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQVKVINESRA 375
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+ER++ LQ ++P K D ASMLDEAI Y+K L+ Q+ +
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 269
>gi|356503206|ref|XP_003520402.1| PREDICTED: transcription factor bHLH25-like [Glycine max]
Length = 312
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE IS L ++P KMD AS+L AI YVK+L++ V LEQ R
Sbjct: 145 LAERKRRENISRMFIALSALIPDLKKMDKASVLSNAIEYVKYLQQHVKDLEQENKKRKTE 204
Query: 234 GVG 236
+G
Sbjct: 205 SLG 207
>gi|255576031|ref|XP_002528911.1| DNA binding protein, putative [Ricinus communis]
gi|223531665|gb|EEF33491.1| DNA binding protein, putative [Ricinus communis]
Length = 331
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMG 233
+A R RRE +S+R L +VPG KMD AS+L +AI +VK L+++V LE R M
Sbjct: 158 LAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKHVKQLQERVKMLEDQTKKRTME 217
Query: 234 GV 235
+
Sbjct: 218 SI 219
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR ISER+R LQ +VP K +TA MLD A+ Y+K L+KQ TL
Sbjct: 40 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQYKTL 93
>gi|224066515|ref|XP_002302118.1| predicted protein [Populus trichocarpa]
gi|222843844|gb|EEE81391.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L K++ LE
Sbjct: 463 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLLKKIQDLE 513
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+ER++ LQ ++P K D ASMLDEAI Y+K L+ Q+ +
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>gi|356497663|ref|XP_003517679.1| PREDICTED: transcription factor MYC2-like [Glycine max]
Length = 648
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 152 IDPESIKPPKRRNVKISKDPQS-----VAARHRREMISERIRILQRIVPGGTKMDTASML 206
++PE K P++R K + + A R RRE +++R L+ +VP +KMD AS+L
Sbjct: 443 VEPE--KRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLL 500
Query: 207 DEAIHYVKFLKKQVHTLE--QAGAHRPMGGV 235
+AI Y+ LK ++ TLE + G + + GV
Sbjct: 501 GDAISYITELKSKLQTLESDKDGMQKQLEGV 531
>gi|168011109|ref|XP_001758246.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690702|gb|EDQ77068.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 418
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
+A R RRE +S+R L IVPG KMD AS+L +AI YVK L++++ LE+
Sbjct: 232 MAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYVKTLEEKLKALEE 283
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+ER++ LQ ++P K D ASMLDEAI Y+K L+ Q+ +
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 269
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+ER++ LQ ++P K D ASMLDEAI Y+K L+ Q+ +
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S++ R RRE ISER+R+LQ +VPG K+ A +LDE I+YV+ L+ QV L
Sbjct: 114 DSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQVEFL 168
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 33/44 (75%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
R RR+ I+++++ LQ++VP +K D ASMLDE I Y+K L+ QV
Sbjct: 195 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 238
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RR+ ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 150 SLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFL 201
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 33/44 (75%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
R RR+ I+++++ LQ++VP +K D ASMLDE I Y+K L+ QV
Sbjct: 233 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 276
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RR I+ER+R LQ IVPG K M A MLDE I+YV+ L+ QV L
Sbjct: 82 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFL 136
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMD-TASMLDEAIHY 212
P+S+ R + P+S+A R RR ISER+R LQ IVP K T+ MLD A+ Y
Sbjct: 236 PDSVPSSIRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEY 295
Query: 213 VKFLKKQVHTL 223
+K L+KQ+ T+
Sbjct: 296 IKDLQKQLKTM 306
>gi|297832282|ref|XP_002884023.1| hypothetical protein ARALYDRAFT_480571 [Arabidopsis lyrata subsp.
lyrata]
gi|297329863|gb|EFH60282.1| hypothetical protein ARALYDRAFT_480571 [Arabidopsis lyrata subsp.
lyrata]
Length = 571
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE--------- 224
+A R RR+ +++R+ L+ +VP TK+D AS+L +AI+YVK L+ + L+
Sbjct: 317 MAERRRRKKLNDRLYKLRSLVPTITKLDRASILGDAINYVKELQNEAKELQDELEENSET 376
Query: 225 QAGAHRPMGGVGFQGAPMAG 244
+ G++R GG+ G + G
Sbjct: 377 EDGSNRQQGGMSLNGTVVTG 396
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RR+ ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 150 SLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFL 201
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RR I+E++R LQ IVPG K M A MLDE I+YV+ L+ QV L
Sbjct: 164 DSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFL 218
>gi|11121434|emb|CAC14865.1| transparent testa 8 [Arabidopsis thaliana]
Length = 518
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 132 NSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQ 191
+S +++MIFR+ P D K R ++ VA R RRE ++E+ L+
Sbjct: 333 SSQWVLKQMIFRV----PFLHDNTKDKRLPREDL-----SHVVAERRRREKLNEKFITLR 383
Query: 192 RIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+VP TKMD S+L + I YV L+K+VH LE
Sbjct: 384 SMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 15/93 (16%)
Query: 161 KRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
+RR ++ +++ R RR+ I+E+++ LQ ++P K D ASMLDEAI Y+K L+ Q+
Sbjct: 249 RRRAAQV----HNLSERRRRDRINEKMKALQELIPHCNKADKASMLDEAIEYLKSLQLQL 304
Query: 221 HTLEQAGAHRPMGGVGFQGAPMAGVAYPSLVKA 253
+ MGG G AGV ++V A
Sbjct: 305 QVVW-------MGG----GIAAAGVHQRTMVAA 326
>gi|451953538|dbj|BAM84238.1| bHLH transcription factor [Dahlia pinnata]
Length = 652
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+A R RRE ++ER IL+ +VP TKMD AS+L + I YVK L+ +V LE
Sbjct: 483 LAERRRREKLNERFIILRTLVPLVTKMDKASILGDTIEYVKQLRNKVQDLE 533
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE I+ER+++LQ +VPG K+ A MLDE I+YV+ L++Q+ L
Sbjct: 136 SLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFL 187
>gi|116831343|gb|ABK28624.1| unknown [Arabidopsis thaliana]
Length = 519
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 132 NSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQ 191
+S +++MIFR+ P D K R ++ VA R RRE ++E+ L+
Sbjct: 333 SSQWVLKQMIFRV----PFLHDNTKDKRLPREDL-----SHVVAERRRREKLNEKFITLR 383
Query: 192 RIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+VP TKMD S+L + I YV L+K+VH LE
Sbjct: 384 SMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>gi|79466906|ref|NP_192720.2| transcription factor TT8 [Arabidopsis thaliana]
gi|27151708|sp|Q9FT81.2|TT8_ARATH RecName: Full=Transcription factor TT8; AltName: Full=Basic
helix-loop-helix protein 42; Short=AtbHLH42; Short=bHLH
42; AltName: Full=Protein TRANSPARENT TESTA 8; AltName:
Full=Transcription factor EN 32; AltName: Full=bHLH
transcription factor 042
gi|91806648|gb|ABE66051.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332657402|gb|AEE82802.1| transcription factor TT8 [Arabidopsis thaliana]
Length = 518
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 132 NSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQ 191
+S +++MIFR+ P D K R ++ VA R RRE ++E+ L+
Sbjct: 333 SSQWVLKQMIFRV----PFLHDNTKDKRLPREDL-----SHVVAERRRREKLNEKFITLR 383
Query: 192 RIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+VP TKMD S+L + I YV L+K+VH LE
Sbjct: 384 SMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.130 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,349,979,260
Number of Sequences: 23463169
Number of extensions: 196248613
Number of successful extensions: 767386
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2245
Number of HSP's successfully gapped in prelim test: 1324
Number of HSP's that attempted gapping in prelim test: 761351
Number of HSP's gapped (non-prelim): 6169
length of query: 267
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 127
effective length of database: 9,074,351,707
effective search space: 1152442666789
effective search space used: 1152442666789
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)