BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043072
(267 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SND4|HEC2_ARATH Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1
Length = 231
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 118/172 (68%), Gaps = 19/172 (11%)
Query: 81 SSSLPLFINTT---TPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRNS---- 133
S++ P F N T P + M P HQP G + + PSPS P EKR
Sbjct: 40 SNTHPFFFNPTHSHLPFDQTM--PHHQP-----GLNFRYA-PSPSSSLP--EKRGGCSDN 89
Query: 134 --MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQ 191
MAAMREMIFRIA MQPIHIDPES+KPPKR+NV+ISKDPQSVAARHRRE ISERIRILQ
Sbjct: 90 ANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQ 149
Query: 192 RIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMA 243
R+VPGGTKMDTASMLDEAIHYVKFLKKQV +LE+ G G +A
Sbjct: 150 RLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVVNGGGMTAVAGGALA 201
>sp|Q9FHA7|HEC1_ARATH Transcription factor HEC1 OS=Arabidopsis thaliana GN=HEC1 PE=1 SV=1
Length = 241
Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 134/222 (60%), Gaps = 52/222 (23%)
Query: 17 DMMAVIM-QMEKLPEFCEAFNNNISPLPHEIHFSNANTNSNISTQPIYHNPNNYVSSPPP 75
D+M ++M QMEKLPEFC NPN+ SP
Sbjct: 4 DIMNMMMHQMEKLPEFC--------------------------------NPNSSFFSPDH 31
Query: 76 TFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLK--TSLPSPSPYPPT-LEKRN 132
T P LF +T MT ++P G L +S+ + Y L+KRN
Sbjct: 32 NNTYPF----LFNSTHYQSDHSMT---NEPGFRYGSGLLTNPSSISPNTAYSSVFLDKRN 84
Query: 133 S---------MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMI 183
+ MAAMREMIFRIA MQPIHIDPE++KPPKRRNV+ISKDPQSVAARHRRE I
Sbjct: 85 NSNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERI 144
Query: 184 SERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQ 225
SERIRILQR+VPGGTKMDTASMLDEAIHYVKFLKKQV +LE+
Sbjct: 145 SERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEE 186
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 131 bits (329), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 81/112 (72%), Gaps = 9/112 (8%)
Query: 136 AMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVP 195
AM+EM + IA MQP+ IDP ++ P RRNV+IS DPQ+V AR RRE ISE+IRIL+RIVP
Sbjct: 87 AMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVP 146
Query: 196 GGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAY 247
GG KMDTASMLDEAI Y KFLK+QV L+ P + GAPMA +Y
Sbjct: 147 GGAKMDTASMLDEAIRYTKFLKRQVRILQ------PHSQI---GAPMANPSY 189
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 130 bits (328), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 81/111 (72%)
Query: 133 SMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQR 192
++A M+EMI+R AA +P++ E ++ PKR+NVKIS DPQ+VAAR RRE ISE+IR+LQ
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300
Query: 193 IVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMA 243
+VPGGTKMDTASMLDEA +Y+KFL+ QV LE + F AP +
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTS 351
>sp|Q9LXD8|HEC3_ARATH Transcription factor HEC3 OS=Arabidopsis thaliana GN=HEC3 PE=1 SV=1
Length = 224
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 82/98 (83%)
Query: 134 MAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRI 193
+ AM+EM+++IAAMQ + IDP ++K PKRRNV+IS DPQSVAARHRRE ISERIRILQR+
Sbjct: 92 LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151
Query: 194 VPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRP 231
VPGGTKMDTASMLDEAI YVKFLK+Q+ L + P
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTP 189
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 165 VKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
K+S DPQSVAAR RR IS+R R+L+ +VPGG+KMDT SML++AIHYVKFLK QV TL
Sbjct: 38 AKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQV-TLH 96
Query: 225 QA 226
QA
Sbjct: 97 QA 98
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 45/59 (76%)
Query: 162 RRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
R +S DPQSVAAR RR IS+R +ILQ +VPGG KMDT SMLDEAI YVKFLK Q+
Sbjct: 38 RSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQI 96
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+HYVKFL+ Q+ L
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 146 AMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASM 205
A+ + +S+K + N I+ DPQS+ AR RRE I++R++ LQ +VP GTK+D ++M
Sbjct: 117 ALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTM 176
Query: 206 LDEAIHYVKFLKKQVHTL--EQAGAHRPMGGVGF 237
L++A+HYVKFL+ Q+ L E + P+ G
Sbjct: 177 LEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGL 210
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
S+K R + DPQS+ AR RRE I+ER++ LQ +VP GTK+D ++ML+EA+HYVKF
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKF 221
Query: 216 LKKQVHTL 223
L+ Q+ L
Sbjct: 222 LQLQIKLL 229
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 7/75 (9%)
Query: 156 SIKPPKRRNVKIS-------KDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDE 208
S KP N KI KDPQS+AA++RRE ISER+++LQ +VP GTK+D +ML++
Sbjct: 189 SKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEK 248
Query: 209 AIHYVKFLKKQVHTL 223
AI YVKFL+ QV L
Sbjct: 249 AIGYVKFLQVQVKVL 263
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 169 KDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
KDPQS+AA++RRE ISER++ILQ +VP GTK+D +ML++AI YVKFL+ QV L
Sbjct: 203 KDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVL 257
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
DPQS+ AR RRE I+ER+RILQ +VP GTK+D ++ML+EA+ YVKFL+ Q+ L
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 95 QEPMTPPLH-QPNNVVTGGRLKTSLPSPSPYPPTLEKRNSMAAMREMIFRIAAMQPIHID 153
Q M P H PN+ + G SLP P + + A A QP
Sbjct: 69 QITMIPLSHNHPNDALFNGFSTGSLPFHLPQGSGGQTQTQSQATASATTGGATAQP---- 124
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
KP R + DP S+A R RRE I+ER++ LQ +VP G K D ASMLDE I YV
Sbjct: 125 --QTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYV 182
Query: 214 KFLKKQVHTL 223
KFL+ QV L
Sbjct: 183 KFLQLQVKVL 192
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
Query: 159 PPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHY 212
PP+ R KI + DP S+A R RRE I+ER++ LQ +VP G K D ASMLDE I Y
Sbjct: 131 PPQSR-TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDY 189
Query: 213 VKFLKKQVHTL----------------EQAGAHRPMGGVGFQGAPMAGVAYPSLVKASHQ 256
VKFL+ QV L E G+H G+ AG + S+ HQ
Sbjct: 190 VKFLQLQVKVLSMSRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQ 249
Query: 257 MV 258
+
Sbjct: 250 VA 251
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 158 KPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLK 217
KP R + DP S+A R RRE I+ER++ LQ +VP K D ASMLDE I YV+FL+
Sbjct: 96 KPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQ 155
Query: 218 KQVHTLEQAGAHRPMGGVGFQGAPMAGVA 246
QV L + +GG G G + G++
Sbjct: 156 LQVKVLSMS----RLGGAGSVGPRLNGLS 180
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 26/198 (13%)
Query: 73 PPPTFTNPSSSLPLFINTTTPVQEPMTPPLHQPNNVVTGGRLKTSLPSPSPYPPTLEKRN 132
PPP+ ++ SS I + TP +P +PP T++ S + P++
Sbjct: 11 PPPSSSDELSSFLRQILSRTPTAQPSSPPKS------------TNVSSAETFFPSV---- 54
Query: 133 SMAAMREMIFRIA--AMQPIHIDPESIKPPKRRNVKISKDPQ--SVAARHRREMISERIR 188
S A+ + + ++ + + +R ++K + D Q +++ + RR I+E+++
Sbjct: 55 SGGAVSSVGYGVSETGQDKYAFEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMK 114
Query: 189 ILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPMGGVGFQGAPMAGVAYP 248
LQ+++P K D ASMLDEAI Y+K L+ QV TL M G+G + V P
Sbjct: 115 ALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLA------VMNGLGLNPMRLPQVPPP 168
Query: 249 SLVKASHQMVDNINMQMF 266
+ + + + ++N++
Sbjct: 169 THTRINETLEQDLNLETL 186
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
++ R RR+ I+E++R LQ ++P K+D ASMLDEAI Y+K L+ QV + A +
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGY 405
>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122
PE=1 SV=1
Length = 379
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPG-GTKMDTASMLDEAIHYVKFLKKQVHTLEQAGA 228
P+S+A R RR ISER+R LQ +VP T+ +TA MLD A+ Y+K L++QV LE++ A
Sbjct: 314 PRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRA 372
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L++Q+ L
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE--------- 224
+A R RR+ +++R+ L+ +VP TK+D AS+L +AI+YVK L+ + L+
Sbjct: 317 MAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSET 376
Query: 225 QAGAHRPMGGVGFQGAPMAGVAYPSL 250
+ G++RP GG+ G + G +P L
Sbjct: 377 EDGSNRPQGGMSLNGTVVTGF-HPGL 401
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
P+S+A R RR IS+RIR LQ +VP K +TA ML+EA+ YVK L++Q+ L
Sbjct: 194 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQEL 247
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER+R+LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 218 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFL 269
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+R LQ +VPG K+ A MLDE I+YV+ L+ QV L
Sbjct: 145 DSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFL 199
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER++ILQ +VPG K + A +LDE I+Y++ L++QV L
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE I ER+++LQ +VPG K+ A MLDE I+YV+ L++QV L
Sbjct: 310 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 364
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISER+ +LQ +VPG ++ A MLDE I+YV+ L++QV L
Sbjct: 200 DSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFL 254
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RR I+ER++ LQ IVPG K M A+MLDE I+YV+ L+ QV L
Sbjct: 156 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 210
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 155 ESIKPPKRRNVKI------SKDPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLD 207
+S PPK + + + + S+A R RRE ISER++ LQ +VPG K+ A MLD
Sbjct: 291 QSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 350
Query: 208 EAIHYVKFLKKQVHTL 223
E I+YV+ L++QV L
Sbjct: 351 EIINYVQSLQRQVEFL 366
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 194 DRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFL 248
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 144 IAAMQPIHIDP---ESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKM 200
I+ M +++D +S+ R + P+S+A R RR IS+RIR LQ +VP K
Sbjct: 161 ISGMMDMNMDKIFEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQ 220
Query: 201 -DTASMLDEAIHYVKFLKKQVHTL 223
+TA ML+EA+ YVK L+ Q+ L
Sbjct: 221 TNTADMLEEAVEYVKALQSQIQEL 244
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 177 RHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQV 220
R RR+ I++R++ LQ++VP +K D ASMLDE I Y+K L+ QV
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RR I+ER+R LQ +VPG K M A+MLDE I+YV+ L+ QV L
Sbjct: 154 DSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFL 208
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE IS++++ LQ IVPG K+ A MLDE I+YV+ L++QV L
Sbjct: 150 DRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFL 204
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ R RR+ I+ER++ LQ ++P K D ASMLDEAI Y+K L+ Q+ +
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 132 NSMAAMREMIFRIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQ 191
+S +++MIFR+ P D K R ++ VA R RRE ++E+ L+
Sbjct: 333 SSQWVLKQMIFRV----PFLHDNTKDKRLPREDL-----SHVVAERRRREKLNEKFITLR 383
Query: 192 RIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
+VP TKMD S+L + I YV L+K+VH LE
Sbjct: 384 SMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 154 PESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYV 213
P SI+P R + DP S+A R RRE I+ERIR LQ +VP K D A+M+DE + YV
Sbjct: 139 PTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYV 198
Query: 214 KFLKKQVHTLEQAGAHRPMGGVG 236
KFL+ QV L + +GG G
Sbjct: 199 KFLRLQVKVLSMSR----LGGAG 217
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLEQAGAHRPM 232
+A R RRE +++R L +VPG KMD AS+L +A+ ++K+L+++V LE+ R +
Sbjct: 155 IAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERRL 213
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 173 SVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTL 223
S+A R RRE ISER++ LQ +VPG K+ A MLDE I+YV+ L+ Q+ L
Sbjct: 235 SLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFL 286
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
+ D S+A R RRE I+ER++ LQ +VPG K M A MLD I YV+ L+ Q+ L
Sbjct: 111 ATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFL 167
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 56 NISTQPIYHNPNNYVSSPPPTFTNPSSSLPLFINT-------TTPVQEPMTPPLHQPNNV 108
N S+ I NPN P P+ + + P F NT +T + P + N
Sbjct: 313 NGSSSTITENPN---LDPTPSPVHSQTQNPKFNNTFSRELNFSTSSSTLVKPRSGEILNF 369
Query: 109 VTGGRLKTSLPSPSPYPPTLE----KRNSMAAMREMIFRIA---AMQPIHIDPESI---- 157
G+ + P PS Y + ++ SM + + A + H D E+
Sbjct: 370 GDEGKRSSGNPDPSSYSGQTQFENKRKRSMVLNEDKVLSFGDKTAGESDHSDLEASVVKE 429
Query: 158 ----KPPKRRNVKISKDPQS-----VAARHRREMISERIRILQRIVPGGTKMDTASMLDE 208
K PK+R K + + A R RRE +++R L+ +VP +KMD AS+L +
Sbjct: 430 VAVEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGD 489
Query: 209 AIHYVKFLKKQVHTLE 224
AI Y+ LK +V E
Sbjct: 490 AIAYINELKSKVVKTE 505
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 174 VAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
++ + RR I+E+++ LQ ++P K D ASMLDEAI Y+K L+ QV L
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 168 SKDPQSVAARHRREMISERIRILQRIVPGGTKMD-TASMLDEAIHYVKFLKKQVHTL 223
+ D S+A R RRE I+ R+++LQ +VPG K+ TA +LDE I++V+ L++QV L
Sbjct: 192 ATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEML 248
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
PE=1 SV=1
Length = 359
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 171 PQSVAARHRREMISERIRILQRIVPGGTKM-DTASMLDEAIHYVKFLKKQVHTLEQAGAH 229
P+S+A R RR ISER+R LQ +VP K +T+ MLD A+ Y+K L++Q L A+
Sbjct: 289 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRAN 348
>sp|Q9M0X8|BH114_ARATH Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114
PE=2 SV=2
Length = 298
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 179 RREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTL 223
R+E + +RI LQ++V K DTAS+L+EA+ Y+KFL++QV L
Sbjct: 175 RKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVL 219
>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
SV=1
Length = 302
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 156 SIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKF 215
+I+P R + DP S+A R RRE I+ERIR LQ +VP K D A+M+DE + YVKF
Sbjct: 139 TIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKF 198
Query: 216 LKKQVHTLEQAGAHRPMGGVG 236
L+ QV L + +GG G
Sbjct: 199 LRLQVKVLSMSR----LGGAG 215
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 175 AARHRREMISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKKQVHTLE 224
A R RRE +++R L+ +VP +KMD AS+L +AI Y+K L+++V +E
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIME 448
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 170 DPQSVAARHRREMISERIRILQRIVPGGTK-MDTASMLDEAIHYVKFLKKQVHTL 223
D S+A R RRE ISE++ LQ I+PG K + A +LDE I+Y++ L++QV L
Sbjct: 162 DRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFL 216
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 143 RIAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRREMISERIRILQRIVPGGTKMDT 202
++ A + H E+ R+ + + + ++A R RRE I+E+++ LQ+++P K
Sbjct: 232 KLKAREETHGTEEARGSTSRKRSRTA-EMHNLAERRRREKINEKMKTLQQLIPRCNKSTK 290
Query: 203 ASMLDEAIHYVKFLKKQVHTL 223
S LD+AI YVK L+ Q+ +
Sbjct: 291 VSTLDDAIEYVKSLQSQIQGM 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,034,521
Number of Sequences: 539616
Number of extensions: 4651407
Number of successful extensions: 20533
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 283
Number of HSP's that attempted gapping in prelim test: 19265
Number of HSP's gapped (non-prelim): 1365
length of query: 267
length of database: 191,569,459
effective HSP length: 115
effective length of query: 152
effective length of database: 129,513,619
effective search space: 19686070088
effective search space used: 19686070088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)