BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043074
(373 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 176/305 (57%), Gaps = 16/305 (5%)
Query: 68 SLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFR-EFR 126
L + S+ EL A+DNFS I+G G FG VYK +L+ G VA+K+L ++ QG +F+
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 127 AEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNS 186
E+E + HRN++++ G+C + +R+L+Y ++ NGS+ L + S
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-----------ES 132
Query: 187 LCPLSWETRVKIVRGVANGLAYLHGLEKP-IIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
PL W R +I G A GLAYLH P IIHRD+K++N+LLD +FEA + DFGLA+ +
Sbjct: 133 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 192
Query: 246 DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP-NLPVVLDG 304
D HV V GT+G++ PEYL ++ DV+ +G++++E+ T R +L + +
Sbjct: 193 DYKDXHVXXAVRGTIGHIAPEYLSTGKSSE-KTDVFGYGVMLLELITGQRAFDLARLAND 251
Query: 305 QEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYV 364
+V LL+W + + K +VD ++ E V + ++A +CT ERP MS V
Sbjct: 252 DDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEE-VEQLIQVALLCTQSSPMERPKMSEV 310
Query: 365 VQLLD 369
V++L+
Sbjct: 311 VRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 174/305 (57%), Gaps = 16/305 (5%)
Query: 68 SLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFR-EFR 126
L + S+ EL A+DNF I+G G FG VYK +L+ G VA+K+L ++ QG +F+
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 127 AEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNS 186
E+E + HRN++++ G+C + +R+L+Y ++ NGS+ L + S
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-----------ES 124
Query: 187 LCPLSWETRVKIVRGVANGLAYLHGLEKP-IIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
PL W R +I G A GLAYLH P IIHRD+K++N+LLD +FEA + DFGLA+ +
Sbjct: 125 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
Query: 246 DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP-NLPVVLDG 304
D HV V G +G++ PEYL ++ DV+ +G++++E+ T R +L + +
Sbjct: 185 DYKDXHVXXAVRGXIGHIAPEYLSTGKSSE-KTDVFGYGVMLLELITGQRAFDLARLAND 243
Query: 305 QEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYV 364
+V LL+W + + K +VD ++ E V + ++A +CT ERP MS V
Sbjct: 244 DDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEE-VEQLIQVALLCTQSSPMERPKMSEV 302
Query: 365 VQLLD 369
V++L+
Sbjct: 303 VRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 168/321 (52%), Gaps = 36/321 (11%)
Query: 66 DPSLSQISMSELIDATDNFSTDKI------IGDGSFGFVYKAKLSSGVTVAIKKL----D 115
D S EL + T+NF I +G+G FG VYK +++ TVA+KKL D
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVD 67
Query: 116 KDAFQGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRN 175
+ ++F E++ + K +H N+V++LG+ + G D L+Y ++ NGSL
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---------- 117
Query: 176 DDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAH 235
+D L+ PLSW R KI +G ANG+ +LH E IHRDIKS+N+LLD F A
Sbjct: 118 --LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAK 173
Query: 236 ISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
ISDFGLAR + + + + +++ GT YM PE L G T D+YSFG++++EI T
Sbjct: 174 ISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEI--TPKSDIYSFGVVLLEIIT-- 229
Query: 295 RPNLPVVLDGQEVGLL--EWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTN 352
LP V + +E LL + + +D ++ + V + +A C +
Sbjct: 230 --GLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN--DADSTSVEAMYSVASQCLH 285
Query: 353 EKSRERPAMSYVVQLLDELVA 373
EK +RP + V QLL E+ A
Sbjct: 286 EKKNKRPDIKKVQQLLQEMTA 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 167/321 (52%), Gaps = 36/321 (11%)
Query: 66 DPSLSQISMSELIDATDNFSTDKI------IGDGSFGFVYKAKLSSGVTVAIKKL----D 115
D S EL + T+NF I +G+G FG VYK +++ TVA+KKL D
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVD 67
Query: 116 KDAFQGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRN 175
+ ++F E++ + K +H N+V++LG+ + G D L+Y ++ NGSL
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---------- 117
Query: 176 DDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAH 235
+D L+ PLSW R KI +G ANG+ +LH E IHRDIKS+N+LLD F A
Sbjct: 118 --LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAK 173
Query: 236 ISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
ISDFGLAR + + + + ++ GT YM PE L G T D+YSFG++++EI T
Sbjct: 174 ISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEI--TPKSDIYSFGVVLLEIIT-- 229
Query: 295 RPNLPVVLDGQEVGLL--EWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTN 352
LP V + +E LL + + +D ++ + V + +A C +
Sbjct: 230 --GLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN--DADSTSVEAMYSVASQCLH 285
Query: 353 EKSRERPAMSYVVQLLDELVA 373
EK +RP + V QLL E+ A
Sbjct: 286 EKKNKRPDIKKVQQLLQEMTA 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 166/321 (51%), Gaps = 36/321 (11%)
Query: 66 DPSLSQISMSELIDATDNFSTDKI------IGDGSFGFVYKAKLSSGVTVAIKKL----D 115
D S EL + T+NF I +G+G FG VYK +++ TVA+KKL D
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVD 61
Query: 116 KDAFQGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRN 175
+ ++F E++ + K +H N+V++LG+ + G D L+Y ++ NGSL
Sbjct: 62 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---------- 111
Query: 176 DDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAH 235
+D L+ PLSW R KI +G ANG+ +LH E IHRDIKS+N+LLD F A
Sbjct: 112 --LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAK 167
Query: 236 ISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
ISDFGLAR + + + ++ GT YM PE L G T D+YSFG++++EI T
Sbjct: 168 ISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEI--TPKSDIYSFGVVLLEIIT-- 223
Query: 295 RPNLPVVLDGQEVGLL--EWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTN 352
LP V + +E LL + + +D ++ + V + +A C +
Sbjct: 224 --GLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN--DADSTSVEAMYSVASQCLH 279
Query: 353 EKSRERPAMSYVVQLLDELVA 373
EK +RP + V QLL E+ A
Sbjct: 280 EKKNKRPDIKKVQQLLQEMTA 300
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 172/302 (56%), Gaps = 21/302 (6%)
Query: 71 QISMSELIDATDNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEME 130
++ + +L +AT+NF +IG G FG VYK L G VA+K+ ++ QG EF E+E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 131 TLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPL 190
TL RH ++V ++G+C + +LIY+++ENG+L + L+ + L ++ +
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS----------DLPTMS-M 136
Query: 191 SWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR-IDTSH 249
SWE R++I G A GL YLH + IIHRD+KS N+LLD +F I+DFG++++ +
Sbjct: 137 SWEQRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQ 194
Query: 250 SHVSTQVAGTMGYMPPEYL--GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
+H+ V GT+GY+ PEY G T + DVYSFG+++ E+ R + L + V
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKS---DVYSFGVVLFEVLCA-RSAIVQSLPREMV 250
Query: 308 GLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQL 367
L EWA + ++VD N++ +++ +R++ A C S +RP+M V+
Sbjct: 251 NLAEWAVESHNNGQLEQIVDPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309
Query: 368 LD 369
L+
Sbjct: 310 LE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 172/302 (56%), Gaps = 21/302 (6%)
Query: 71 QISMSELIDATDNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEME 130
++ + +L +AT+NF +IG G FG VYK L G VA+K+ ++ QG EF E+E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 131 TLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPL 190
TL RH ++V ++G+C + +LIY+++ENG+L + L+ + L ++ +
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS----------DLPTMS-M 136
Query: 191 SWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR-IDTSH 249
SWE R++I G A GL YLH + IIHRD+KS N+LLD +F I+DFG++++ +
Sbjct: 137 SWEQRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ 194
Query: 250 SHVSTQVAGTMGYMPPEYL--GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
+H+ V GT+GY+ PEY G T + DVYSFG+++ E+ R + L + V
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKS---DVYSFGVVLFEVLCA-RSAIVQSLPREMV 250
Query: 308 GLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQL 367
L EWA + ++VD N++ +++ +R++ A C S +RP+M V+
Sbjct: 251 NLAEWAVESHNNGQLEQIVDPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309
Query: 368 LD 369
L+
Sbjct: 310 LE 311
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 110/313 (35%), Positives = 158/313 (50%), Gaps = 32/313 (10%)
Query: 72 ISMSELIDATDNFSTDKI------IGDGSFGFVYKAKLSSGVTVAIKKL----DKDAFQG 121
S EL + T+NF I G+G FG VYK +++ TVA+KKL D +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 122 FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGS 181
++F E++ K +H N+V++LG+ + G D L+Y + NGSL +D
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL------------LDRL 112
Query: 182 KQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGL 241
L+ PLSW R KI +G ANG+ +LH E IHRDIKS+N+LLD F A ISDFGL
Sbjct: 113 SCLDGTPPLSWHXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGL 170
Query: 242 ARRIDTSHSHV-STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPV 300
AR + V +++ GT Y PE L G T D+YSFG++++EI T LP
Sbjct: 171 ARASEKFAQXVXXSRIVGTTAYXAPEALRGEI--TPKSDIYSFGVVLLEIIT----GLPA 224
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
V + +E LL + ++ + + V + +A C +EK +RP
Sbjct: 225 VDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPD 284
Query: 361 MSYVVQLLDELVA 373
+ V QLL E A
Sbjct: 285 IKKVQQLLQEXTA 297
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 17/209 (8%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFR--EFRAEMETLGKLRHRNIVKILGYC 147
IG GSFG V++A+ G VA+K L + F R EF E+ + +LRH NIV +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
+ ++ E++ GSL + LH + + +D + R+ + VA G+
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR------------RLSMAYDVAKGMN 151
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
YLH PI+HRD+KS N+L+D + + DFGL+ R+ S S AGT +M PE
Sbjct: 152 YLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS-RLKASXFLXSKXAAGTPEWMAPEV 210
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRP 296
L + + DVYSFG+++ E+AT +P
Sbjct: 211 L-RDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 17/209 (8%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFR--EFRAEMETLGKLRHRNIVKILGYC 147
IG GSFG V++A+ G VA+K L + F R EF E+ + +LRH NIV +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
+ ++ E++ GSL + LH + + +D + R+ + VA G+
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR------------RLSMAYDVAKGMN 151
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
YLH PI+HR++KS N+L+D + + DFGL+ R+ S S AGT +M PE
Sbjct: 152 YLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS-RLKASTFLSSKSAAGTPEWMAPEV 210
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRP 296
L + + DVYSFG+++ E+AT +P
Sbjct: 211 L-RDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 46/307 (14%)
Query: 79 DATDNF-------STDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMET 131
DA D++ + + IG GSFG VYK K V V + + Q + F+ E+
Sbjct: 14 DAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 73
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
L K RH NI+ +GY ++ ++ ++ E SL LH + ++ K+L
Sbjct: 74 LRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHASETKFEM---KKL------- 122
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLA-RRIDTSHS 250
+ I R A G+ YLH K IIHRD+KS+N+ L D I DFGLA + S S
Sbjct: 123 ----IDIARQTARGMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176
Query: 251 HVSTQVAGTMGYMPPEY--LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVG 308
H Q++G++ +M PE + + + DVY+FGI++ E+ T G
Sbjct: 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT---------------G 221
Query: 309 LLEWARTMEARNKEIEMVDSNISREELSEAGV---REYFRIACMCTNEKSRERPAMSYVV 365
L ++ + R++ IEMV +LS+ + R+ C +K ERP+ ++
Sbjct: 222 QLPYS-NINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
Query: 366 QLLDELV 372
++EL
Sbjct: 281 AEIEELA 287
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 137/288 (47%), Gaps = 39/288 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG GSFG VYK K V V + + Q + F+ E+ L K RH NI+ +GY ++
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 78
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ ++ E SL LH + ++ K+L + I R A G+ YL
Sbjct: 79 KPQLAIVTQWCEGSSLYHHLHASETKFEM---KKL-----------IDIARQTARGMDYL 124
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR-RIDTSHSHVSTQVAGTMGYMPPEY- 267
H K IIHRD+KS+N+ L D I DFGLA + S SH Q++G++ +M PE
Sbjct: 125 HA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 182
Query: 268 -LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
+ + + DVY+FGI++ E+ T G L ++ + R++ IEMV
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMT---------------GQLPYS-NINNRDQIIEMV 226
Query: 327 DSNISREELSEAGV---REYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+LS+ + R+ C +K ERP+ ++ ++EL
Sbjct: 227 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 137/289 (47%), Gaps = 39/289 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG GSFG VYK K V V + + Q + F+ E+ L K RH NI+ +GY ++
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 90
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ ++ E SL LH + ++ K+L + I R A G+ YL
Sbjct: 91 KPQLAIVTQWCEGSSLYHHLHASETKFEM---KKL-----------IDIARQTARGMDYL 136
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLA-RRIDTSHSHVSTQVAGTMGYMPPEY- 267
H K IIHRD+KS+N+ L D I DFGLA + S SH Q++G++ +M PE
Sbjct: 137 HA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 268 -LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
+ + + DVY+FGI++ E+ T G L ++ + R++ IEMV
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMT---------------GQLPYS-NINNRDQIIEMV 238
Query: 327 DSNISREELSEAGV---REYFRIACMCTNEKSRERPAMSYVVQLLDELV 372
+LS+ + R+ C +K ERP+ ++ ++EL
Sbjct: 239 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 140/317 (44%), Gaps = 50/317 (15%)
Query: 70 SQISMSELIDATDN-FSTDKIIGDGSFGFVYKAKL-SSGVTVAIKKL-------DKDAFQ 120
S+ S L DN +K IG G FG V+K +L VAIK L + + +
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 121 GFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG 180
F+EF+ E+ + L H NIVK+ G + V+ EFV G L L D +
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAH------ 117
Query: 181 SKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE-----AH 235
P+ W +++++ +A G+ Y+ PI+HRD++S N+ L S E A
Sbjct: 118 --------PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAK 169
Query: 236 ISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAA-TVMLDVYSFGILMIEIATQI 294
++DFGL+++ H + + G +M PE +G + T D YSF +++ I T
Sbjct: 170 VADFGLSQQ----SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
Query: 295 RPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEK 354
P D G +++ I M+ R + E + +C +
Sbjct: 226 GP-----FDEYSYGKIKF----------INMIREEGLRPTIPEDCPPRLRNVIELCWSGD 270
Query: 355 SRERPAMSYVVQLLDEL 371
++RP SY+V+ L EL
Sbjct: 271 PKKRPHFSYIVKELSEL 287
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 129/282 (45%), Gaps = 39/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG GSFG VYK K V V + + Q + F+ E+ L K RH NI+ +GY ++
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ ++ E SL LH ++ ++ L + I R A G+ YL
Sbjct: 75 APQLAIVTQWCEGSSLYHHLH------IIETKFEMIKL--------IDIARQTAQGMDYL 120
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR-RIDTSHSHVSTQVAGTMGYMPPEY- 267
H K IIHRD+KS+N+ L D I DFGLA + S SH Q++G++ +M PE
Sbjct: 121 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 268 -LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
+ + DVY+FGI++ E+ T G L ++ + R++ I MV
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMT---------------GQLPYS-NINNRDQIIFMV 222
Query: 327 DSNISREELSEAGV---REYFRIACMCTNEKSRERPAMSYVV 365
+LS+ + R+ C +K ERP ++
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 139/317 (43%), Gaps = 50/317 (15%)
Query: 70 SQISMSELIDATDN-FSTDKIIGDGSFGFVYKAKL-SSGVTVAIKKL-------DKDAFQ 120
S+ S L DN +K IG G FG V+K +L VAIK L + + +
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 121 GFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG 180
F+EF+ E+ + L H NIVK+ G + V+ EFV G L L D +
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAH------ 117
Query: 181 SKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE-----AH 235
P+ W +++++ +A G+ Y+ PI+HRD++S N+ L S E A
Sbjct: 118 --------PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAK 169
Query: 236 ISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAA-TVMLDVYSFGILMIEIATQI 294
++DFG +++ H + + G +M PE +G + T D YSF +++ I T
Sbjct: 170 VADFGTSQQ----SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
Query: 295 RPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEK 354
P D G +++ I M+ R + E + +C +
Sbjct: 226 GP-----FDEYSYGKIKF----------INMIREEGLRPTIPEDCPPRLRNVIELCWSGD 270
Query: 355 SRERPAMSYVVQLLDEL 371
++RP SY+V+ L EL
Sbjct: 271 PKKRPHFSYIVKELSEL 287
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 129/282 (45%), Gaps = 39/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG GSFG VYK K V V + + Q + F+ E+ L K RH NI+ +GY ++
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ ++ E SL LH ++ ++ L + I R A G+ YL
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKL--------IDIARQTAQGMDYL 120
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLA-RRIDTSHSHVSTQVAGTMGYMPPEY- 267
H K IIHRD+KS+N+ L D I DFGLA + S SH Q++G++ +M PE
Sbjct: 121 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 268 -LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
+ + DVY+FGI++ E+ T G L ++ + R++ I MV
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMT---------------GQLPYS-NINNRDQIIFMV 222
Query: 327 DSNISREELSEAGV---REYFRIACMCTNEKSRERPAMSYVV 365
+LS+ + R+ C +K ERP ++
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 129/282 (45%), Gaps = 39/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG GSFG VYK K V V + + Q + F+ E+ L K RH NI+ +GY ++
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 76
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ ++ E SL LH ++ ++ L + I R A G+ YL
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKL--------IDIARQTAQGMDYL 122
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR-RIDTSHSHVSTQVAGTMGYMPPEY- 267
H K IIHRD+KS+N+ L D I DFGLA + S SH Q++G++ +M PE
Sbjct: 123 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
Query: 268 -LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
+ + DVY+FGI++ E+ T G L ++ + R++ I MV
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMT---------------GQLPYS-NINNRDQIIFMV 224
Query: 327 DSNISREELSEAGV---REYFRIACMCTNEKSRERPAMSYVV 365
+LS+ + R+ C +K ERP ++
Sbjct: 225 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 266
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 139/317 (43%), Gaps = 50/317 (15%)
Query: 70 SQISMSELIDATDN-FSTDKIIGDGSFGFVYKAKL-SSGVTVAIKKL-------DKDAFQ 120
S+ S L DN +K IG G FG V+K +L VAIK L + + +
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 121 GFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG 180
F+EF+ E+ + L H NIVK+ G + V+ EFV G L L D +
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAH------ 117
Query: 181 SKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE-----AH 235
P+ W +++++ +A G+ Y+ PI+HRD++S N+ L S E A
Sbjct: 118 --------PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAK 169
Query: 236 ISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAA-TVMLDVYSFGILMIEIATQI 294
++DF L+++ H + + G +M PE +G + T D YSF +++ I T
Sbjct: 170 VADFSLSQQ----SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
Query: 295 RPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEK 354
P D G +++ I M+ R + E + +C +
Sbjct: 226 GP-----FDEYSYGKIKF----------INMIREEGLRPTIPEDCPPRLRNVIELCWSGD 270
Query: 355 SRERPAMSYVVQLLDEL 371
++RP SY+V+ L EL
Sbjct: 271 PKKRPHFSYIVKELSEL 287
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 129/282 (45%), Gaps = 39/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG GSFG VYK K V V + + Q + F+ E+ L K RH NI+ +GY ++
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 94
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ ++ E SL LH ++ ++ L + I R A G+ YL
Sbjct: 95 KPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKL--------IDIARQTAQGMDYL 140
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLA-RRIDTSHSHVSTQVAGTMGYMPPEY- 267
H K IIHRD+KS+N+ L D I DFGLA + S SH Q++G++ +M PE
Sbjct: 141 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
Query: 268 -LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
+ + DVY+FGI++ E+ T G L ++ + R++ I MV
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMT---------------GQLPYS-NINNRDQIIFMV 242
Query: 327 DSNISREELSEAGV---REYFRIACMCTNEKSRERPAMSYVV 365
+LS+ + R+ C +K ERP ++
Sbjct: 243 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 284
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 103/207 (49%), Gaps = 22/207 (10%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG GSFG VYK K V V I K+ + F+ FR E+ L K RH NI+ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLAY 208
+ ++ ++ E SL + LH V +K Q+ L + I R A G+ Y
Sbjct: 104 D-NLAIVTQWCEGSSLYKHLH-------VQETKFQMFQL--------IDIARQTAQGMDY 147
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR-RIDTSHSHVSTQVAGTMGYMPPEY 267
LH K IIHRD+KS+N+ L I DFGLA + S S Q G++ +M PE
Sbjct: 148 LHA--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEV 205
Query: 268 --LGGNTAATVMLDVYSFGILMIEIAT 292
+ N + DVYS+GI++ E+ T
Sbjct: 206 IRMQDNNPFSFQSDVYSYGIVLYELMT 232
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 129/282 (45%), Gaps = 39/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG GSFG VYK K V V + + Q + F+ E+ L K RH NI+ +GY ++
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 79
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ ++ E SL LH ++ ++ L + I R A G+ YL
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKL--------IDIARQTAQGMDYL 125
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR-RIDTSHSHVSTQVAGTMGYMPPEY- 267
H K IIHRD+KS+N+ L D I DFGLA + S SH Q++G++ +M PE
Sbjct: 126 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 268 -LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
+ + DVY+FGI++ E+ T G L ++ + R++ I MV
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMT---------------GQLPYS-NINNRDQIIFMV 227
Query: 327 DSNISREELSEAGV---REYFRIACMCTNEKSRERPAMSYVV 365
+LS+ + R+ C +K ERP ++
Sbjct: 228 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 129/282 (45%), Gaps = 39/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG GSFG VYK K V V + + Q + F+ E+ L K RH NI+ +GY ++
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ ++ E SL LH ++ ++ L + I R A G+ YL
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKL--------IDIARQTAQGMDYL 120
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR-RIDTSHSHVSTQVAGTMGYMPPEY- 267
H K IIHRD+KS+N+ L D I DFGLA + S SH Q++G++ +M PE
Sbjct: 121 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 268 -LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
+ + DVY+FGI++ E+ T G L ++ + R++ I MV
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMT---------------GQLPYS-NINNRDQIIFMV 222
Query: 327 DSNISREELSEAGV---REYFRIACMCTNEKSRERPAMSYVV 365
+LS+ + R+ C +K ERP ++
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 129/282 (45%), Gaps = 39/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG GSFG VYK K V V + + Q + F+ E+ L K RH NI+ +GY ++
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 79
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ ++ E SL LH ++ ++ L + I R A G+ YL
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKL--------IDIARQTAQGMDYL 125
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR-RIDTSHSHVSTQVAGTMGYMPPEY- 267
H K IIHRD+KS+N+ L D I DFGLA + S SH Q++G++ +M PE
Sbjct: 126 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 268 -LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
+ + DVY+FGI++ E+ T G L ++ + R++ I MV
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMT---------------GQLPYS-NINNRDQIIFMV 227
Query: 327 DSNISREELSEAGV---REYFRIACMCTNEKSRERPAMSYVV 365
+LS+ + R+ C +K ERP ++
Sbjct: 228 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 134/290 (46%), Gaps = 40/290 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG GSFG VYK K V V + + Q + F+ E+ L K RH NI+ +GY ++
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 102
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ ++ E SL LH ++ ++ L + I R A G+ YL
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKL--------IDIARQTAQGMDYL 148
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLA-RRIDTSHSHVSTQVAGTMGYMPPEY- 267
H K IIHRD+KS+N+ L D I DFGLA + S SH Q++G++ +M PE
Sbjct: 149 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 268 -LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
+ + DVY+FGI++ E+ T G L ++ + R++ I MV
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMT---------------GQLPYS-NINNRDQIIFMV 250
Query: 327 DSNISREELSEAGV---REYFRIACMCTNEKSRERPAMSYVVQLLDELVA 373
+LS+ + R+ C +K ERP ++ + EL+A
Sbjct: 251 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI-ELLA 299
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 134/290 (46%), Gaps = 40/290 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG GSFG VYK K V V + + Q + F+ E+ L K RH NI+ +GY ++
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 101
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ ++ E SL LH ++ ++ L + I R A G+ YL
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKL--------IDIARQTAQGMDYL 147
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR-RIDTSHSHVSTQVAGTMGYMPPEY- 267
H K IIHRD+KS+N+ L D I DFGLA + S SH Q++G++ +M PE
Sbjct: 148 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
Query: 268 -LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
+ + DVY+FGI++ E+ T G L ++ + R++ I MV
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMT---------------GQLPYS-NINNRDQIIFMV 249
Query: 327 DSNISREELSEAGV---REYFRIACMCTNEKSRERPAMSYVVQLLDELVA 373
+LS+ + R+ C +K ERP ++ + EL+A
Sbjct: 250 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI-ELLA 298
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 138/294 (46%), Gaps = 44/294 (14%)
Query: 88 KIIGDGSFGFVYKA--KLSSG---VTVAIKKLDKDAFQGFR-EFRAEMETLGKLRHRNIV 141
K+IG G FG VYK K SSG V VAIK L + R +F E +G+ H NI+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
++ G + ++I E++ENG+LD++L + DG + L V ++RG
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREK------DGEFSVLQL--------VGMLRG 155
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+A G+ YL + +HRD+ + N+L++S+ +SDFGL+R ++ T G +
Sbjct: 156 IAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 213
Query: 262 --YMPPEYLGGNTAATVMLDVYSFGILMIEIATQ-IRPNLPVVLDGQEVGLLEWARTMEA 318
+ PE + T DV+SFGI+M E+ T RP W E
Sbjct: 214 IRWTAPEAI-SYRKFTSASDVWSFGIVMWEVMTYGERPY--------------W----EL 254
Query: 319 RNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDELV 372
N E+ ++ R +++ C ++ RP + +V +LD+L+
Sbjct: 255 SNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 134/290 (46%), Gaps = 40/290 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG GSFG VYK K V V + + Q + F+ E+ L K RH NI+ +GY ++
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 102
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ ++ E SL LH ++ ++ L + I R A G+ YL
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKL--------IDIARQTAQGMDYL 148
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR-RIDTSHSHVSTQVAGTMGYMPPEY- 267
H K IIHRD+KS+N+ L D I DFGLA + S SH Q++G++ +M PE
Sbjct: 149 HA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 268 -LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
+ + DVY+FGI++ E+ T G L ++ + R++ I MV
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMT---------------GQLPYS-NINNRDQIIFMV 250
Query: 327 DSNISREELSEAGV---REYFRIACMCTNEKSRERPAMSYVVQLLDELVA 373
+LS+ + R+ C +K ERP ++ + EL+A
Sbjct: 251 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI-ELLA 299
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 120/226 (53%), Gaps = 20/226 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK------LSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGK 134
+N + IG+G+FG V++A+ VA+K L ++A + +F+ E + +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTS-------RNDDVDGSKQLNS- 186
+ NIVK+LG CA G L++E++ G L+++L S + D+ +++S
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 187 -LCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
PLS ++ I R VA G+AYL E+ +HRD+ + N L+ + I+DFGL+R I
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLS--ERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
Query: 246 DTS-HSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
++ + A + +MPPE + N T DV+++G+++ EI
Sbjct: 225 YSADYYKADGNDAIPIRWMPPESIFYNRYTTES-DVWAYGVVLWEI 269
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 120/234 (51%), Gaps = 25/234 (10%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAFQG 121
DP+ + ++ +DAT N S DK++G G FG V +L ++VAIK L +
Sbjct: 30 DPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 122 -FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG 180
R+F E +G+ H NI+++ G +++ E++ENGSLD +L ++D
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFT 145
Query: 181 SKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFG 240
QL V ++RG+A+G+ YL + +HRD+ + N+L++S+ +SDFG
Sbjct: 146 VIQL-----------VGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFG 192
Query: 241 LARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
LAR ++ T G + + PE + T DV+S+GI++ E+ +
Sbjct: 193 LARVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 109/210 (51%), Gaps = 10/210 (4%)
Query: 90 IGDGSFGFVYKAKLSS------GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKI 143
+G+G+FG V+ A+ + + VA+K L + + ++F+ E E L L+H++IV+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 144 LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVA 203
G C G ++++E++ +G L+++L + + + + PL + + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 204 NGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHVSTQVAGTMGY 262
G+ YL GL +HRD+ + N L+ I DFG++R I T + V + + +
Sbjct: 146 AGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 203
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
MPPE + T DV+SFG+++ EI T
Sbjct: 204 MPPESILYRKFTTES-DVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 109/210 (51%), Gaps = 10/210 (4%)
Query: 90 IGDGSFGFVYKAKLSS------GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKI 143
+G+G+FG V+ A+ + + VA+K L + + ++F+ E E L L+H++IV+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 144 LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVA 203
G C G ++++E++ +G L+++L + + + + PL + + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 204 NGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHVSTQVAGTMGY 262
G+ YL GL +HRD+ + N L+ I DFG++R I T + V + + +
Sbjct: 140 AGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 197
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
MPPE + T DV+SFG+++ EI T
Sbjct: 198 MPPESILYRKFTTES-DVWSFGVVLWEIFT 226
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 146/315 (46%), Gaps = 44/315 (13%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAFQG 121
DP+ + ++ +DAT N S DK++G G FG V +L ++VAIK L +
Sbjct: 30 DPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 122 -FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG 180
R+F E +G+ H NI+++ G +++ E++ENGSLD +L ++D
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFT 145
Query: 181 SKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFG 240
QL V ++RG+A+G+ YL + +HRD+ + N+L++S+ +SDFG
Sbjct: 146 VIQL-----------VGMLRGIASGMKYLSDMG--FVHRDLAARNILINSNLVCKVSDFG 192
Query: 241 LARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIATQ-IRPN 297
L+R ++ T G + + PE + T DV+S+GI++ E+ + RP
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 298 LPVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRE 357
+ Q+V I+ VD + Y ++ C +
Sbjct: 252 WE--MSNQDV---------------IKAVDEGYRLPPPMDCPAALY-QLMLDCWQKDRNN 293
Query: 358 RPAMSYVVQLLDELV 372
RP +V +LD+L+
Sbjct: 294 RPKFEQIVSILDKLI 308
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 122/235 (51%), Gaps = 27/235 (11%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAF-- 119
DP+ + ++ +DAT N S DK++G G FG V +L ++VAIK L K +
Sbjct: 28 DPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTE 85
Query: 120 QGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVD 179
+ R+F E +G+ H NI+++ G +++ E++ENGSLD +L ++D
Sbjct: 86 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQF 142
Query: 180 GSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDF 239
QL V ++RG+A+G+ YL + +HRD+ + N+L++S+ +SDF
Sbjct: 143 TVIQL-----------VGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDF 189
Query: 240 GLARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
GL+R ++ T G + + PE + T DV+S+GI++ E+ +
Sbjct: 190 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 25/234 (10%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAFQG 121
DP+ + ++ +DAT N S DK++G G FG V +L ++VAIK L +
Sbjct: 30 DPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 122 -FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG 180
R+F E +G+ H NI+++ G +++ E++ENGSLD +L ++D
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFT 145
Query: 181 SKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFG 240
QL V ++RG+A+G+ YL + +HRD+ + N+L++S+ +SDFG
Sbjct: 146 VIQL-----------VGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFG 192
Query: 241 LARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
L+R ++ T G + + PE + T DV+S+GI++ E+ +
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 123/240 (51%), Gaps = 26/240 (10%)
Query: 61 DSASF-DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLD 115
D +F DP+ + ++ +DAT N S DK++G G FG V +L ++VAIK L
Sbjct: 24 DPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSR 174
+ R+F E +G+ H NI+++ G +++ E++ENGSLD +L +
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---K 139
Query: 175 NDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA 234
+D QL V ++RG+A+G+ YL + +HRD+ + N+L++S+
Sbjct: 140 HDAQFTVIQL-----------VGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVC 186
Query: 235 HISDFGLARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+SDFGL+R ++ T G + + PE + T DV+S+GI++ E+ +
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 25/234 (10%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAFQG 121
DP+ + ++ +DAT N S DK++G G FG V +L ++VAIK L +
Sbjct: 30 DPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 122 -FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG 180
R+F E +G+ H NI+++ G +++ E++ENGSLD +L ++D
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFT 145
Query: 181 SKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFG 240
QL V ++RG+A+G+ YL + +HRD+ + N+L++S+ +SDFG
Sbjct: 146 VIQL-----------VGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFG 192
Query: 241 LARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
L+R ++ T G + + PE + T DV+S+GI++ E+ +
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 109/210 (51%), Gaps = 10/210 (4%)
Query: 90 IGDGSFGFVYKAKLSS------GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKI 143
+G+G+FG V+ A+ + + VA+K L + + ++F+ E E L L+H++IV+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 144 LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVA 203
G C G ++++E++ +G L+++L + + + + PL + + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 204 NGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHVSTQVAGTMGY 262
G+ YL GL +HRD+ + N L+ I DFG++R I T + V + + +
Sbjct: 169 AGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 226
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
MPPE + T DV+SFG+++ EI T
Sbjct: 227 MPPESI-LYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 25/234 (10%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAFQG 121
DP+ + ++ +DAT N S DK++G G FG V +L ++VAIK L +
Sbjct: 30 DPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 122 -FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG 180
R+F E +G+ H NI+++ G +++ E++ENGSLD +L ++D
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFT 145
Query: 181 SKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFG 240
QL V ++RG+A+G+ YL + +HRD+ + N+L++S+ +SDFG
Sbjct: 146 VIQL-----------VGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFG 192
Query: 241 LARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
L+R ++ T G + + PE + T DV+S+GI++ E+ +
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 148/321 (46%), Gaps = 45/321 (14%)
Query: 61 DSASF-DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLD 115
D +F DP+ + ++ +DAT N S DK++G G FG V +L ++VAIK L
Sbjct: 24 DPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSR 174
+ R+F E +G+ H NI+++ G +++ E++ENGSLD +L +
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---K 139
Query: 175 NDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA 234
+D QL V ++RG+A+G+ YL + +HRD+ + N+L++S+
Sbjct: 140 HDAQFTVIQL-----------VGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVC 186
Query: 235 HISDFGLARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+SDFGL R ++ T G + + PE + T DV+S+GI++ E+ +
Sbjct: 187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMS 245
Query: 293 Q-IRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCT 351
RP + Q+V I+ VD + Y ++ C
Sbjct: 246 YGERPYWE--MSNQDV---------------IKAVDEGYRLPPPMDCPAALY-QLMLDCW 287
Query: 352 NEKSRERPAMSYVVQLLDELV 372
+ RP +V +LD+L+
Sbjct: 288 QKDRNNRPKFEQIVSILDKLI 308
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 140/302 (46%), Gaps = 47/302 (15%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
+ID + ++++G G+FG V KAK + VAIK+++ ++ + + F E+ L ++
Sbjct: 4 HMIDYKE-IEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESESER--KAFIVELRQLSRV 59
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
H NIVK+ G C + + L+ E+ E GSL LH PL + T
Sbjct: 60 NHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAE---------------PLPYYTA 102
Query: 196 VKIVRG---VANGLAYLHGLE-KPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHS 250
+ + G+AYLH ++ K +IHRD+K N+LL + I DFG A I T
Sbjct: 103 AHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 160
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLL 310
T G+ +M PE G+ + DV+S+GI++ E+ T+ +P + G +
Sbjct: 161 --MTNNKGSAAWMAPEVFEGSNYSE-KCDVFSWGIILWEVITRRKPFDEI---GGPAFRI 214
Query: 311 EWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
WA R I+ + I + C ++ +RP+M +V+++
Sbjct: 215 MWAVHNGTRPPLIKNLPKPIE-------------SLMTRCWSKDPSQRPSMEEIVKIMTH 261
Query: 371 LV 372
L+
Sbjct: 262 LM 263
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 25/232 (10%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKL----SSGVTVAIKKLDKDAFQ- 120
+P + S + I+A+ +KIIG G G V +L V VAIK L +
Sbjct: 34 EPGRAGRSFTREIEAS-RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER 92
Query: 121 GFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG 180
R+F +E +G+ H NI+++ G G +++ E++ENGSLD +L DG
Sbjct: 93 QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH------DG 146
Query: 181 SKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFG 240
+ L V ++RGV G+ YL L +HRD+ + NVL+DS+ +SDFG
Sbjct: 147 QFTIMQL--------VGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 241 LARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEI 290
L+R ++ T G + + PE + T ++ DV+SFG++M E+
Sbjct: 197 LSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSAS-DVWSFGVVMWEV 247
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKLRH 137
++F + +G G FG VY A+ S +A+K L K + + R E+E LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NI+++ GY LI E+ G++ + L SR D+ + + L
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL---------- 121
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
AN L+Y H K +IHRDIK N+LL S+ E I+DFG + +S T +
Sbjct: 122 -----ANALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLC 171
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
GT+ Y+PPE + G +D++S G+L E + P
Sbjct: 172 GTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEFLVGMPP 209
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 123/237 (51%), Gaps = 29/237 (12%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLSSG----VTVAIKKLDKDAF-- 119
DP+ + ++ ID + +++IG G FG V + +L + VAIK L K +
Sbjct: 1 DPNEAVREFAKEIDVS-YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTE 58
Query: 120 QGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVD 179
+ REF +E +G+ H NI+++ G + + +++ EF+ENG+LD +L ND
Sbjct: 59 RQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR---LNDGQF 115
Query: 180 GSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDF 239
QL V ++RG+A+G+ YL E +HRD+ + N+L++S+ +SDF
Sbjct: 116 TVIQL-----------VGMLRGIASGMRYLA--EMSYVHRDLAARNILVNSNLVCKVSDF 162
Query: 240 GLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
GL+R ++ + S T+ + G +P + A T D +S+GI+M E+ +
Sbjct: 163 GLSRFLEENSSD-PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 140/302 (46%), Gaps = 47/302 (15%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
+ID + ++++G G+FG V KAK + VAIK+++ ++ + + F E+ L ++
Sbjct: 3 HMIDYKE-IEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESESER--KAFIVELRQLSRV 58
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
H NIVK+ G C + + L+ E+ E GSL LH PL + T
Sbjct: 59 NHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAE---------------PLPYYTA 101
Query: 196 VKIVRG---VANGLAYLHGLE-KPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHS 250
+ + G+AYLH ++ K +IHRD+K N+LL + I DFG A I T
Sbjct: 102 AHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLL 310
T G+ +M PE G+ + DV+S+GI++ E+ T+ +P + G +
Sbjct: 160 --MTNNKGSAAWMAPEVFEGSNYSE-KCDVFSWGIILWEVITRRKPFDEI---GGPAFRI 213
Query: 311 EWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
WA R I+ + I + C ++ +RP+M +V+++
Sbjct: 214 MWAVHNGTRPPLIKNLPKPIE-------------SLMTRCWSKDPSQRPSMEEIVKIMTH 260
Query: 371 LV 372
L+
Sbjct: 261 LM 262
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 25/232 (10%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKL----SSGVTVAIKKLDKDAFQ- 120
+P + S + I+A+ +KIIG G G V +L V VAIK L +
Sbjct: 34 EPGRAGRSFTREIEAS-RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER 92
Query: 121 GFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG 180
R+F +E +G+ H NI+++ G G +++ E++ENGSLD +L DG
Sbjct: 93 QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH------DG 146
Query: 181 SKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFG 240
+ L V ++RGV G+ YL L +HRD+ + NVL+DS+ +SDFG
Sbjct: 147 QFTIMQL--------VGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 241 LARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEI 290
L+R ++ T G + + PE + T ++ DV+SFG++M E+
Sbjct: 197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSAS-DVWSFGVVMWEV 247
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 27/235 (11%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAF-- 119
DP+ + ++ +DAT N S DK++G G FG V +L ++VAIK L K +
Sbjct: 30 DPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTE 87
Query: 120 QGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVD 179
+ R+F E +G+ H NI+++ G +++ E +ENGSLD +L ++D
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR---KHDAQF 144
Query: 180 GSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDF 239
QL V ++RG+A+G+ YL + +HRD+ + N+L++S+ +SDF
Sbjct: 145 TVIQL-----------VGMLRGIASGMKYLSDMGA--VHRDLAARNILINSNLVCKVSDF 191
Query: 240 GLARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
GL+R ++ T G + + PE + T DV+S+GI++ E+ +
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 127/257 (49%), Gaps = 26/257 (10%)
Query: 66 DPSLSQISMSELI-DATDNFSTDKI-----IGDGSFGFVY--------KAKLSSGVTVAI 111
DP L+ +S EL D F DK+ +G+G+FG V K K VTVA+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 112 KKLDKDAFQG-FREFRAEMETLGKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWL 169
K L DA + + +EME + + +H+NI+ +LG C +I E+ G+L ++L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 170 HDTSRNDDVDGSKQLNSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVL 227
R ++ S +N + ++++ V +A G+ YL + IHRD+ + NVL
Sbjct: 133 R-ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVL 189
Query: 228 LDSDFEAHISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ + I+DFGLAR I+ + +T + +M PE L + T DV+SFG+L
Sbjct: 190 VTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVL 248
Query: 287 MIEIAT---QIRPNLPV 300
M EI T P +PV
Sbjct: 249 MWEIFTLGGSPYPGIPV 265
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 27/235 (11%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAF-- 119
DP+ + ++ +DAT N S DK++G G FG V +L ++VAIK L K +
Sbjct: 30 DPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTE 87
Query: 120 QGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVD 179
+ R+F E +G+ H NI+++ G +++ E +ENGSLD +L ++D
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR---KHDAQF 144
Query: 180 GSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDF 239
QL V ++RG+A+G+ YL + +HRD+ + N+L++S+ +SDF
Sbjct: 145 TVIQL-----------VGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDF 191
Query: 240 GLARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
GL+R ++ T G + + PE + T DV+S+GI++ E+ +
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 127/257 (49%), Gaps = 26/257 (10%)
Query: 66 DPSLSQISMSELI-DATDNFSTDKI-----IGDGSFGFVY--------KAKLSSGVTVAI 111
DP L+ +S EL D F DK+ +G+G+FG V K K VTVA+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 112 KKLDKDAFQ-GFREFRAEMETLGKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWL 169
K L DA + + +EME + + +H+NI+ +LG C +I E+ G+L ++L
Sbjct: 73 KMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 170 HDTSRNDDVDGSKQLNSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVL 227
R ++ S +N + ++++ V +A G+ YL + IHRD+ + NVL
Sbjct: 133 R-ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVL 189
Query: 228 LDSDFEAHISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ + I+DFGLAR I+ + +T + +M PE L + T DV+SFG+L
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVL 248
Query: 287 MIEIAT---QIRPNLPV 300
M EI T P +PV
Sbjct: 249 MWEIFTLGGSPYPGIPV 265
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 127/257 (49%), Gaps = 26/257 (10%)
Query: 66 DPSLSQISMSELI-DATDNFSTDKI-----IGDGSFGFVY--------KAKLSSGVTVAI 111
DP L+ +S EL D F DK+ +G+G+FG V K K VTVA+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 112 KKLDKDAFQG-FREFRAEMETLGKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWL 169
K L DA + + +EME + + +H+NI+ +LG C +I E+ G+L ++L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 170 HDTSRNDDVDGSKQLNSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVL 227
R ++ S +N + ++++ V +A G+ YL + IHRD+ + NVL
Sbjct: 133 R-ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVL 189
Query: 228 LDSDFEAHISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ + I+DFGLAR I+ + +T + +M PE L + T DV+SFG+L
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVL 248
Query: 287 MIEIAT---QIRPNLPV 300
M EI T P +PV
Sbjct: 249 MWEIFTLGGSPYPGIPV 265
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 117
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T+
Sbjct: 118 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTE 165
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 199
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 126/257 (49%), Gaps = 26/257 (10%)
Query: 66 DPSLSQISMSELI-DATDNFSTDKI-----IGDGSFGFVY--------KAKLSSGVTVAI 111
DP L+ +S EL D F DK+ +G+G+FG V K K VTVA+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 112 KKLDKDAFQG-FREFRAEMETLGKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWL 169
K L DA + + +EME + + +H+NI+ +LG C +I E+ G+L ++L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 170 HDTSRNDDVDGSKQLNSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVL 227
R ++ S +N + ++++ V +A G+ YL + IHRD+ + NVL
Sbjct: 133 R-ARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVL 189
Query: 228 LDSDFEAHISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ + I+DFGLAR I+ +T + +M PE L + T DV+SFG+L
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVL 248
Query: 287 MIEIAT---QIRPNLPV 300
M EI T P +PV
Sbjct: 249 MWEIFTLGGSPYPGIPV 265
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 127/257 (49%), Gaps = 26/257 (10%)
Query: 66 DPSLSQISMSELI-DATDNFSTDKI-----IGDGSFGFVY--------KAKLSSGVTVAI 111
DP L+ +S EL D F DK+ +G+G+FG V K K VTVA+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 112 KKLDKDAFQG-FREFRAEMETLGKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWL 169
K L DA + + +EME + + +H+NI+ +LG C +I E+ G+L ++L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 170 HDTSRNDDVDGSKQLNSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVL 227
R ++ S +N + ++++ V +A G+ YL + IHRD+ + NVL
Sbjct: 133 R-ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVL 189
Query: 228 LDSDFEAHISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ + I+DFGLAR I+ + +T + +M PE L + T DV+SFG+L
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVL 248
Query: 287 MIEIAT---QIRPNLPV 300
M EI T P +PV
Sbjct: 249 MWEIFTLGGSPYPGIPV 265
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 127/257 (49%), Gaps = 26/257 (10%)
Query: 66 DPSLSQISMSELI-DATDNFSTDKI-----IGDGSFGFVY--------KAKLSSGVTVAI 111
DP L+ +S EL D F DK+ +G+G+FG V K K VTVA+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 112 KKLDKDAFQ-GFREFRAEMETLGKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWL 169
K L DA + + +EME + + +H+NI+ +LG C +I E+ G+L ++L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 170 HDTSRNDDVDGSKQLNSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVL 227
R ++ S +N + ++++ V +A G+ YL + IHRD+ + NVL
Sbjct: 133 R-ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVL 189
Query: 228 LDSDFEAHISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ + I+DFGLAR I+ + +T + +M PE L + T DV+SFG+L
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVL 248
Query: 287 MIEIAT---QIRPNLPV 300
M EI T P +PV
Sbjct: 249 MWEIFTLGGSPYPGIPV 265
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 114/222 (51%), Gaps = 25/222 (11%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAFQG-FREFRAEMETL 132
+DAT N S DK++G G FG V +L ++VAIK L + R+F E +
Sbjct: 13 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
G+ H NI+++ G +++ E++ENGSLD +L ++D QL
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQL-------- 120
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
V ++RG+A+G+ YL + +HRD+ + N+L++S+ +SDFGL+R ++
Sbjct: 121 ---VGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 253 STQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
T G + + PE + T DV+S+GI++ E+ +
Sbjct: 176 YTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 13/212 (6%)
Query: 90 IGDGSFGFVYKAKL------SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKI 143
+G+G+FG V+ A+ + VA+K L ++F+ E E L L+H +IVK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 144 LGYCASGLDRVLIYEFVENGSLDQWL--HDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
G C G ++++E++++G L+++L H VDG + + L + I
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPR-QAKGELGLSQMLHIASQ 141
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHVSTQVAGTM 260
+A+G+ YL + +HRD+ + N L+ ++ I DFG++R + T + V +
Sbjct: 142 IASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+MPPE + T DV+SFG+++ EI T
Sbjct: 200 RWMPPESIMYRKFTTES-DVWSFGVILWEIFT 230
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G + + L S+ D+ + + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL-------- 122
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 123 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTT 170
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 171 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 204
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 114/222 (51%), Gaps = 25/222 (11%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAFQG-FREFRAEMETL 132
+DAT N S DK++G G FG V +L ++VAIK L + R+F E +
Sbjct: 30 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
G+ H NI+++ G +++ E++ENGSLD +L ++D QL
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQL-------- 137
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
V ++RG+A+G+ YL + +HRD+ + N+L++S+ +SDFGL+R ++
Sbjct: 138 ---VGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 253 STQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
T G + + PE + T DV+S+GI++ E+ +
Sbjct: 193 YTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 86
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L + + +A G+A
Sbjct: 87 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKL--------LDMAAQIAEGMA 132
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHRD++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 133 FIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 190
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 191 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 240
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 241 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 276
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 85
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L + + +A G+A
Sbjct: 86 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKL--------LDMAAQIAEGMA 131
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHRD++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 132 FIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 189
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 190 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 239
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 240 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 275
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 83
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L + + +A G+A
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKL--------LDMAAQIAEGMA 129
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHRD++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 130 FIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 187
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 188 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 237
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 238 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 273
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 79
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L + + +A G+A
Sbjct: 80 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKL--------LDMAAQIAEGMA 125
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHRD++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 126 FIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 183
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 184 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 233
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 234 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 269
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 113/216 (52%), Gaps = 28/216 (12%)
Query: 87 DKIIGDGSFGFVYKAKLSSG----VTVAIKKLDKDAF--QGFREFRAEMETLGKLRHRNI 140
+++IG G FG V + +L + VAIK L K + + REF +E +G+ H NI
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
+++ G + + +++ EF+ENG+LD +L ND QL V ++R
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLR---LNDGQFTVIQL-----------VGMLR 123
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
G+A+G+ YL E +HRD+ + N+L++S+ +SDFGL+R ++ + S T +
Sbjct: 124 GIASGMRYLA--EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PTYTSSLG 180
Query: 261 GYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P + A T D +S+GI+M E+ +
Sbjct: 181 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 77
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L + + +A G+A
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKL--------LDMAAQIAEGMA 123
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHRD++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 124 FIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 182 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 231
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 232 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 77
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L + + +A G+A
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKL--------LDMAAQIAEGMA 123
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHRD++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 124 FIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 182 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 231
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 232 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 126/257 (49%), Gaps = 26/257 (10%)
Query: 66 DPSLSQISMSELI-DATDNFSTDKI-----IGDGSFGFVY--------KAKLSSGVTVAI 111
DP L+ +S EL D F DK+ +G+G+FG V K K VTVA+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 112 KKLDKDAFQG-FREFRAEMETLGKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWL 169
K L DA + + +EME + + +H+NI+ +LG C +I E+ G+L ++L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 170 HDTSRNDDVDGSKQLNSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVL 227
R ++ S +N + ++++ V +A G+ YL + IHRD+ + NVL
Sbjct: 133 R-ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVL 189
Query: 228 LDSDFEAHISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ + I+DFGLAR I+ +T + +M PE L + T DV+SFG+L
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVL 248
Query: 287 MIEIAT---QIRPNLPV 300
M EI T P +PV
Sbjct: 249 MWEIFTLGGSPYPGIPV 265
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 82
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L + + +A G+A
Sbjct: 83 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKL--------LDMAAQIAEGMA 128
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHRD++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 129 FIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 186
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 187 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 236
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 237 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 272
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 83
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L + + +A G+A
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKL--------LDMAAQIAEGMA 129
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHRD++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 130 FIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 187
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 188 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 237
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 238 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 273
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 78
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L + + +A G+A
Sbjct: 79 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKL--------LDMAAQIAEGMA 124
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHRD++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 125 FIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 182
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 183 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 232
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 233 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 268
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 117
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 118 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTD 165
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 199
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 143
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 144 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTT 191
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 192 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 225
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 120
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 121 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTT 168
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 169 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 202
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 134
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 135 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTT 182
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 183 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 87
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L + + +A G+A
Sbjct: 88 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKL--------LDMAAQIAEGMA 133
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHRD++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 134 FIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 191
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 192 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 241
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 242 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 277
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 117
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 118 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTT 165
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 199
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 118
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 119 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTD 166
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 167 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 200
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 116
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 117 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTT 164
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 165 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 198
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 120
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 121 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTT 168
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 169 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 202
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 117
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 118 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTD 165
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 199
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 77
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L + + +A G+A
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKL--------LDMAAQIAEGMA 123
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHRD++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 124 FIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 182 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 231
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 232 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKLRH 137
++F + +G G FG VY A+ S +A+K L K + + R E+E LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NI+++ GY LI E+ G++ + L SR D+ + + L
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL---------- 121
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
AN L+Y H K +IHRDIK N+LL S+ E I+DFG + +S +
Sbjct: 122 -----ANALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LC 171
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
GT+ Y+PPE + G +D++S G+L E + P
Sbjct: 172 GTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEFLVGMPP 209
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 117
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 118 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTX 165
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 199
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 122
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 123 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTT 170
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 171 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 204
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 118
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 119 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTT 166
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
++GT+ Y+PPE + G +D++S G+L E
Sbjct: 167 LSGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 200
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAFQG 121
DP+ + ++ +DA+ +++IG G FG V +L V VAIK L +
Sbjct: 28 DPNRAVHQFAKELDAS-CIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEK 86
Query: 122 -FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG 180
R+F E +G+ H N+V + G G +++ EF+ENG+LD +L DG
Sbjct: 87 QRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKH------DG 140
Query: 181 SKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFG 240
+ L V ++RG+A G+ YL + +HRD+ + N+L++S+ +SDFG
Sbjct: 141 QFTVIQL--------VGMLRGIAAGMRYLADMG--YVHRDLAARNILVNSNLVCKVSDFG 190
Query: 241 LARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
L+R I+ V T G + + PE + T DV+S+GI+M E+ +
Sbjct: 191 LSRVIEDDPEAVYTTTGGKIPVRWTAPEAI-QYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 72
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L ++ + +A G+A
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKLLDMAAQ--------IAEGMA 118
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHRD++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 119 FIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 176
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 177 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 226
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 227 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 262
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 122
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 123 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTT 170
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 171 LCGTLDYLPPEXIEGRXHDE-KVDLWSLGVLCYEF 204
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 127/290 (43%), Gaps = 35/290 (12%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
++ +K +G G FG V+ A + VA+K + K F AE + L+H +V
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 73
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
K L + +I EF+ GSL +L +GSKQ PL +
Sbjct: 74 K-LHAVVTKEPIYIITEFMAKGSLLDFLKSD------EGSKQ-----PLP--KLIDFSAQ 119
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+A G+A++ ++ IHRD++++N+L+ + I+DFGLAR I+ + +
Sbjct: 120 IAEGMAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK 177
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNK 321
+ PE + + T+ DV+SFGIL++EI T R P + + + + LE M
Sbjct: 178 WTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR--- 233
Query: 322 EIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
E E + I C + ERP Y+ +LD+
Sbjct: 234 --------------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 269
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 121
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 122 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTT 169
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 170 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 122
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 123 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTD 170
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 171 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 204
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 110/220 (50%), Gaps = 39/220 (17%)
Query: 93 GSFGFVYKAKL-SSGVTVAIKKL-DKDAFQGFREFRAEMETLGKLRHRNIVKILGYCASG 150
G FG V+KA+L + V V I + DK ++Q E+ +L ++H NI++ +G G
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIFPIQDKQSWQN----EYEVYSLPGMKHENILQFIGAEKRG 90
Query: 151 ----LDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGL 206
+D LI F E GSL +L +SW I +A GL
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKANV----------------VSWNELCHIAETMARGL 134
Query: 207 AYLH----GLE---KPII-HRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ-VA 257
AYLH GL+ KP I HRDIKS NVLL ++ A I+DFGLA + + S T
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV 194
Query: 258 GTMGYMPPEYLGG----NTAATVMLDVYSFGILMIEIATQ 293
GT YM PE L G A + +D+Y+ G+++ E+A++
Sbjct: 195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR 234
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 27/221 (12%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAF--QGFREFRAEMET 131
+DAT N S DK++G G FG V +L ++VAIK L K + + R+F E
Sbjct: 13 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASI 70
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
+G+ H NI+++ G +++ E +ENGSLD +L ++D QL
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR---KHDAQFTVIQL------- 120
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSH 251
V ++RG+A+G+ YL + +HRD+ + N+L++S+ +SDFGL+R ++
Sbjct: 121 ----VGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 174
Query: 252 VSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEI 290
T G + + PE + T DV+S+GI++ E+
Sbjct: 175 AYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEV 214
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 84 FSTDKIIGDGSFGFVYKAKLSSGVTVAIKKL----DKDAFQGFREFRAEMETLGKLRHRN 139
+ ++IIG G FG VY+A G VA+K D+D Q R E + L+H N
Sbjct: 9 LTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
I+ + G C + L+ EF G L++ V K++ ++W +
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNR----------VLSGKRIPPDILVNWAVQ---- 113
Query: 200 RGVANGLAYLHGLE-KPIIHRDIKSSNVLLDSDFE--------AHISDFGLARRIDTSHS 250
+A G+ YLH PIIHRD+KSSN+L+ E I+DFGLAR H
Sbjct: 114 --IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE---WHR 168
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
AG +M PE + + + DV+S+G+L+ E+ T
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGS-DVWSYGVLLWELLT 209
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 26/263 (9%)
Query: 60 FDSASFDPSLSQISMSELID------ATDNFSTDKIIGDGSFGFVY--------KAKLSS 105
S + P L+ +S EL + D + K +G+G FG V K K
Sbjct: 53 LSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKE 112
Query: 106 GVTVAIKKLDKDAFQG-FREFRAEMETLGKL-RHRNIVKILGYCASGLDRVLIYEFVENG 163
VTVA+K L DA + + +EME + + +H+NI+ +LG C +I E+ G
Sbjct: 113 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 172
Query: 164 SLDQWLHDTSRNDDVDGSKQLNSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDI 221
+L ++L R ++ S +N + ++++ V +A G+ YL + IHRD+
Sbjct: 173 NLREYLR-ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDL 229
Query: 222 KSSNVLLDSDFEAHISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDV 280
+ NVL+ + I+DFGLAR I+ + +T + +M PE L + T DV
Sbjct: 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDV 288
Query: 281 YSFGILMIEIAT---QIRPNLPV 300
+SFG+LM EI T P +PV
Sbjct: 289 WSFGVLMWEIFTLGGSPYPGIPV 311
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 126/257 (49%), Gaps = 26/257 (10%)
Query: 66 DPSLSQISMSELI-DATDNFSTDKI-----IGDGSFGFVY--------KAKLSSGVTVAI 111
DP L+ +S EL D F DK+ +G+G+FG V K K VTVA+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 112 KKLDKDAFQG-FREFRAEMETLGKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWL 169
K L DA + + +EME + + +H+NI+ +LG C +I + G+L ++L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYL 132
Query: 170 HDTSRNDDVDGSKQLNSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVL 227
R ++ S +N + ++++ V +A G+ YL + IHRD+ + NVL
Sbjct: 133 R-ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVL 189
Query: 228 LDSDFEAHISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ + I+DFGLAR I+ + +T + +M PE L + T DV+SFG+L
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVL 248
Query: 287 MIEIAT---QIRPNLPV 300
M EI T P +PV
Sbjct: 249 MWEIFTLGGSPYPGIPV 265
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 125/256 (48%), Gaps = 26/256 (10%)
Query: 67 PSLSQISMSELI-DATDNFSTDKI-----IGDGSFGFVY--------KAKLSSGVTVAIK 112
P L+ +S EL D F DK+ +G+G FG V K K VTVA+K
Sbjct: 1 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 60
Query: 113 KLDKDAFQG-FREFRAEMETLGKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLH 170
L DA + + +EME + + +H+NI+ +LG C +I E+ G+L ++L
Sbjct: 61 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 120
Query: 171 DTSRNDDVDGSKQLNSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLL 228
R ++ S +N + ++++ V +A G+ YL + IHRD+ + NVL+
Sbjct: 121 -ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLTARNVLV 177
Query: 229 DSDFEAHISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
+ I+DFGLAR I+ + +T + +M PE L + T DV+SFG+LM
Sbjct: 178 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLM 236
Query: 288 IEIAT---QIRPNLPV 300
EI T P +PV
Sbjct: 237 WEIFTLGGSPYPGIPV 252
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 35/290 (12%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
++ +K +G G FG V+ A + VA+K + K F AE + L+H +V
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
K L + +I EF+ GSL +L ++D+ GSKQ PL +
Sbjct: 247 K-LHAVVTKEPIYIITEFMAKGSLLDFL----KSDE--GSKQ-----PLP--KLIDFSAQ 292
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+A G+A++ ++ IHRD++++N+L+ + I+DFGLAR I+ + +
Sbjct: 293 IAEGMAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK 350
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNK 321
+ PE + + T+ DV+SFGIL++EI T R P + + + + LE M
Sbjct: 351 WTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR--- 406
Query: 322 EIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
E E + I C + ERP Y+ +LD+
Sbjct: 407 --------------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 41/311 (13%)
Query: 64 SFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGF 122
S DPS E+ + TD + +G G +G VY+ +TVA+K L +D +
Sbjct: 2 SMDPSSPNYDKWEM-ERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-V 58
Query: 123 REFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSK 182
EF E + +++H N+V++LG C +I EF+ G+L +L + +R +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-------Q 111
Query: 183 QLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLA 242
++N++ L T+ +++ + YL +K IHRD+ + N L+ + ++DFGL+
Sbjct: 112 EVNAVVLLYMATQ------ISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLS 163
Query: 243 RRI--DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPV 300
R + DT +H + + + PE L N ++ DV++FG+L+ EIAT P
Sbjct: 164 RLMTGDTYTAHAGAKFP--IKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
+ Q LLE D + R E V E R AC N +RP+
Sbjct: 221 IDLSQVYELLE--------------KDYRMERPEGCPEKVYELMR-ACWQWN--PSDRPS 263
Query: 361 MSYVVQLLDEL 371
+ + Q + +
Sbjct: 264 FAEIHQAFETM 274
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G + + L S+ D+ + + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL-------- 122
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S
Sbjct: 123 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXX 170
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 171 LXGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 204
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 125/256 (48%), Gaps = 26/256 (10%)
Query: 67 PSLSQISMSELI-DATDNFSTDKI-----IGDGSFGFVY--------KAKLSSGVTVAIK 112
P L+ +S EL D F DK+ +G+G FG V K K VTVA+K
Sbjct: 6 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 65
Query: 113 KLDKDAFQG-FREFRAEMETLGKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLH 170
L DA + + +EME + + +H+NI+ +LG C +I E+ G+L ++L
Sbjct: 66 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 125
Query: 171 DTSRNDDVDGSKQLNSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLL 228
R ++ S +N + ++++ V +A G+ YL + IHRD+ + NVL+
Sbjct: 126 -ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLV 182
Query: 229 DSDFEAHISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
+ I+DFGLAR I+ + +T + +M PE L + T DV+SFG+LM
Sbjct: 183 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLM 241
Query: 288 IEIAT---QIRPNLPV 300
EI T P +PV
Sbjct: 242 WEIFTLGGSPYPGIPV 257
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 12/217 (5%)
Query: 83 NFSTDKIIGDGSFGFVYKAKL------SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLR 136
N + +G+G+FG V+ A+ + VA+K L + ++F E E L L+
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H +IVK G C G ++++E++++G L+++L + D + N L+ +
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL--RAHGPDAVLMAEGNPPTELTQSQML 131
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHVSTQ 255
I + +A G+ YL + +HRD+ + N L+ + I DFG++R + T + V
Sbjct: 132 HIAQQIAAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH 189
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ +MPPE + T DV+S G+++ EI T
Sbjct: 190 TMLPIRWMPPESIMYRKFTTES-DVWSLGVVLWEIFT 225
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 125/256 (48%), Gaps = 26/256 (10%)
Query: 67 PSLSQISMSELI-DATDNFSTDKI-----IGDGSFGFVY--------KAKLSSGVTVAIK 112
P L+ +S EL D F DK+ +G+G FG V K K VTVA+K
Sbjct: 3 PMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 62
Query: 113 KLDKDAFQG-FREFRAEMETLGKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLH 170
L DA + + +EME + + +H+NI+ +LG C +I E+ G+L ++L
Sbjct: 63 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 122
Query: 171 DTSRNDDVDGSKQLNSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLL 228
R ++ S +N + ++++ V +A G+ YL + IHRD+ + NVL+
Sbjct: 123 -ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLV 179
Query: 229 DSDFEAHISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
+ I+DFGLAR I+ + +T + +M PE L + T DV+SFG+LM
Sbjct: 180 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLM 238
Query: 288 IEIAT---QIRPNLPV 300
EI T P +PV
Sbjct: 239 WEIFTLGGSPYPGIPV 254
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 142/311 (45%), Gaps = 41/311 (13%)
Query: 64 SFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGF 122
S DPS E+ + TD + +G G +G VY+ +TVA+K L +D +
Sbjct: 2 SMDPSSPNYDKWEM-ERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-V 58
Query: 123 REFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSK 182
EF E + +++H N+V++LG C +I EF+ G+L +L + +R +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-------Q 111
Query: 183 QLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLA 242
++N++ L T+ +++ + YL +K IHRD+ + N L+ + ++DFGL+
Sbjct: 112 EVNAVVLLYMATQ------ISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGLS 163
Query: 243 RRI--DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPV 300
R + DT +H + + + PE L N ++ DV++FG+L+ EIAT P
Sbjct: 164 RLMTGDTYTAHAGAKFP--IKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
+ Q LLE D + R E V E R C +RP+
Sbjct: 221 IDLSQVYELLE--------------KDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 263
Query: 361 MSYVVQLLDEL 371
+ + Q + +
Sbjct: 264 FAEIHQAFETM 274
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 119
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I++FG + +S T
Sbjct: 120 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTT 167
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 168 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 201
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 120/284 (42%), Gaps = 34/284 (11%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
K +G G FG V+ ++ VA+K L K + F E + L+H +V++
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
+I E++ GSL +L D G L L S + +A G+A
Sbjct: 78 TREEPIYIITEYMAKGSLLDFL-----KSDEGGKVLLPKLIDFSAQ--------IAEGMA 124
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
Y+ K IHRD++++NVL+ I+DFGLAR I+ + + + PE
Sbjct: 125 YIE--RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 182
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T+ DV+SFGIL+ EI T + P RT N ++
Sbjct: 183 INFG-CFTIKSDVWSFGILLYEIVTYGKIPYP-------------GRT----NADVMTAL 224
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
S R E E + I MC EK+ ERP Y+ +LD+
Sbjct: 225 SQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDF 268
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 120
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I++FG + +S T
Sbjct: 121 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTT 168
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 169 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 202
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 117
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S
Sbjct: 118 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAA 165
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 199
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 126/257 (49%), Gaps = 26/257 (10%)
Query: 66 DPSLSQISMSELI-DATDNFSTDKI-----IGDGSFGFVY--------KAKLSSGVTVAI 111
DP L+ +S EL D F DK+ +G+G+FG V K K VTVA+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 112 KKLDKDAFQG-FREFRAEMETLGKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWL 169
K L DA + + +EME + + +H+NI+ +LG C +I + G+L ++L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYL 132
Query: 170 HDTSRNDDVDGSKQLNSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVL 227
R ++ S +N + ++++ V +A G+ YL + IHRD+ + NVL
Sbjct: 133 R-ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVL 189
Query: 228 LDSDFEAHISDFGLARRIDT-SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ + I+DFGLAR I+ + +T + +M PE L + T DV+SFG+L
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVL 248
Query: 287 MIEIAT---QIRPNLPV 300
M EI T P +PV
Sbjct: 249 MWEIFTLGGSPYPGIPV 265
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 46/316 (14%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAF-- 119
DP+ + ++ IDA+ +K+IG G FG V +L + VAIK L K +
Sbjct: 14 DPNQAVREFAKEIDAS-CIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTD 71
Query: 120 QGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVD 179
+ R+F +E +G+ H NI+ + G ++I E++ENGSLD +L +ND
Sbjct: 72 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR---KNDGRF 128
Query: 180 GSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDF 239
QL V ++RG+ +G+ YL + +HRD+ + N+L++S+ +SDF
Sbjct: 129 TVIQL-----------VGMLRGIGSGMKYLSDMSA--VHRDLAARNILVNSNLVCKVSDF 175
Query: 240 GLARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIATQ-IRP 296
G++R ++ T G + + PE + T DV+S+GI+M E+ + RP
Sbjct: 176 GMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERP 234
Query: 297 NLPVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSR 356
+ Q+V + +E + +D I+ +L C ++
Sbjct: 235 YWD--MSNQDV-----IKAIEEGYRLPPPMDCPIALHQL-----------MLDCWQKERS 276
Query: 357 ERPAMSYVVQLLDELV 372
+RP +V +LD+L+
Sbjct: 277 DRPKFGQIVNMLDKLI 292
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ +S +A+K L K + + R E+E L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 117
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S
Sbjct: 118 -------ANALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAA 165
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 199
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 135/284 (47%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 73
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L ++ + +A G+A
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKLLDMAAQ--------IAEGMA 119
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHR+++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 120 FIE--ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 177
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 178 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 227
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 228 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 263
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 120/284 (42%), Gaps = 34/284 (11%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
K +G G FG V+ ++ VA+K L K + F E + L+H +V++
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
+I EF+ GSL +L D G L L S + +A G+A
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFL-----KSDEGGKVLLPKLIDFSAQ--------IAEGMA 123
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
Y+ K IHRD++++NVL+ I+DFGLAR I+ + + + PE
Sbjct: 124 YIE--RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 181
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T+ +V+SFGIL+ EI T + P RT N ++
Sbjct: 182 INFG-CFTIKSNVWSFGILLYEIVTYGKIPYP-------------GRT----NADVMSAL 223
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
S R E E + I MC EK+ ERP Y+ +LD+
Sbjct: 224 SQGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDF 267
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 119
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S
Sbjct: 120 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXX 167
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 168 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 201
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ +A+K L K + + R E+E L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 114
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S T
Sbjct: 115 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTT 162
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 163 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 196
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 120
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S
Sbjct: 121 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXX 168
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 169 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 202
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 117
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S
Sbjct: 118 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXX 165
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 199
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 63 ASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQG 121
+ DPS E+ + TD + +G G +G VY+ +TVA+K L +D +
Sbjct: 1 GAMDPSSPNYDKWEM-ERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME- 57
Query: 122 FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGS 181
EF E + +++H N+V++LG C +I EF+ G+L +L + +R
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR------- 110
Query: 182 KQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGL 241
+++N++ L T+ +++ + YL +K IHRD+ + N L+ + ++DFGL
Sbjct: 111 QEVNAVVLLYMATQ------ISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 242 ARRI--DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
+R + DT +H + + + PE L N ++ DV++FG+L+ EIAT P
Sbjct: 163 SRLMTGDTXTAHAGAKFP--IKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYP 219
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+ Q LLE D + R E V E R C +RP
Sbjct: 220 GIDLSQVYELLE--------------KDYRMERPEGCPEKVYELMRA---CWQWNPSDRP 262
Query: 360 AMSYVVQLLDEL 371
+ + + Q + +
Sbjct: 263 SFAEIHQAFETM 274
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 120
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S
Sbjct: 121 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAA 168
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 169 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 202
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 118
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S
Sbjct: 119 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT--- 166
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 167 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 200
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 143
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S
Sbjct: 144 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDD 191
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 192 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 225
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 39/284 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G G V+ + VA+K L + + F AE + +L+H+ +V++ Y
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL--YAVV 77
Query: 150 GLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK-QLNSLCPLSWETRVKIVRGVANGLA 207
+ + +I E++ENGSL +L S G K +N L + + +A G+A
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPS------GIKLTINKL--------LDMAAQIAEGMA 123
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
++ E+ IHRD++++N+L+ I+DFGLAR I+ + + + PE
Sbjct: 124 FIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEA 181
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
+ T T+ DV+SFGIL+ EI T R P + + + + LE + MV
Sbjct: 182 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---------RGYRMVR 231
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EEL +++ +C E+ +RP Y+ +L++
Sbjct: 232 PDNCPEEL--------YQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 44/312 (14%)
Query: 63 ASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQG 121
+ DP+ + M + TD + +G G +G VY+ +TVA+K L +D +
Sbjct: 1 GAMDPNYDKWEM----ERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME- 54
Query: 122 FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGS 181
EF E + +++H N+V++LG C +I EF+ G+L +L + +R
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR------- 107
Query: 182 KQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGL 241
+++N++ L T+ +++ + YL +K IHRD+ + N L+ + ++DFGL
Sbjct: 108 QEVNAVVLLYMATQ------ISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGL 159
Query: 242 ARRI--DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
+R + DT +H + + + PE L N ++ DV++FG+L+ EIAT P
Sbjct: 160 SRLMTGDTYTAHAGAKFP--IKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYP 216
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+ Q LLE D + R E V E R AC N +RP
Sbjct: 217 GIDLSQVYELLE--------------KDYRMERPEGCPEKVYELMR-ACWQWN--PSDRP 259
Query: 360 AMSYVVQLLDEL 371
+ + + Q + +
Sbjct: 260 SFAEIHQAFETM 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 41/312 (13%)
Query: 63 ASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQG 121
+ DPS E+ + TD + +G G +G VY+ +TVA+K L +D +
Sbjct: 1 GAMDPSSPNYDKWEM-ERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME- 57
Query: 122 FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGS 181
EF E + +++H N+V++LG C +I EF+ G+L +L + +R
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR------- 110
Query: 182 KQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGL 241
+++N++ L T+ +++ + YL +K IHRD+ + N L+ + ++DFGL
Sbjct: 111 QEVNAVVLLYMATQ------ISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 242 ARRI--DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
+R + DT +H + + + PE L N ++ DV++FG+L+ EIAT P
Sbjct: 163 SRLMTGDTYTAHAGAKFP--IKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYP 219
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+ Q LLE D + R E V E R AC N +RP
Sbjct: 220 GIDLSQVYELLE--------------KDYRMERPEGCPEKVYELMR-ACWQWN--PSDRP 262
Query: 360 AMSYVVQLLDEL 371
+ + + Q + +
Sbjct: 263 SFAEIHQAFETM 274
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKL 135
A ++F + +G G FG VY A+ S +A+K L K + + R E+E L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ GY LI E+ G++ + L S+ D+ + + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-------- 120
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
AN L+Y H K +IHRDIK N+LL S E I+DFG + +S
Sbjct: 121 -------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDD 168
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT+ Y+PPE + G +D++S G+L E
Sbjct: 169 LCGTLDYLPPEMIEGRMHDE-KVDLWSLGVLCYEF 202
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R +++N++ L T+ +++ + Y
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNR-------QEVNAVVLLYMATQ------ISSAMEY 127
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 128 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPE 183
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 184 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------K 228
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R AC N +RP+ + + Q + +
Sbjct: 229 DYRMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 270
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G FG VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R ++++++ L T+ +++ + Y
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNR-------QEVSAVVLLYMATQ------ISSAMEY 124
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 125 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPE 180
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 181 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--------------K 225
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R AC N +RP+ + + Q + +
Sbjct: 226 DYRMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R +++N++ L T+ +++ + Y
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR-------QEVNAVVLLYMATQ------ISSAMEY 126
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 127 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPE 182
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------K 227
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R C +RP+ + + Q + +
Sbjct: 228 DYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R +++N++ L T+ +++ + Y
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNR-------QEVNAVVLLYMATQ------ISSAMEY 130
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 131 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPE 186
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 187 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------K 231
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R C +RP+ + + Q + +
Sbjct: 232 DYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 273
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R +++N++ L T+ +++ + Y
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR-------QEVNAVVLLYMATQ------ISSAMEY 126
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 127 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPE 182
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------K 227
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R C +RP+ + + Q + +
Sbjct: 228 DYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R +++N++ L T+ +++ + Y
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNR-------QEVNAVVLLYMATQ------ISSAMEY 128
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 129 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPE 184
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 185 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------K 229
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R AC N +RP+ + + Q + +
Sbjct: 230 DYRMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 271
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R +++N++ L T+ +++ + Y
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNR-------QEVNAVVLLYMATQ------ISSAMEY 139
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 140 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPE 195
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 196 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------K 240
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R AC N +RP+ + + Q + +
Sbjct: 241 DYRMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 282
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 28/216 (12%)
Query: 87 DKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAF--QGFREFRAEMETLGKLRHRNI 140
+++IG G FG V L + VAIK L K + + R+F +E +G+ H N+
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
+ + G ++I EF+ENGSLD +L DG + L V ++R
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQN------DGQFTVIQL--------VGMLR 142
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAG 258
G+A G+ YL + +HRD+ + N+L++S+ +SDFGL+R + DTS ++ + G
Sbjct: 143 GIAAGMKYLADMN--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 200
Query: 259 TMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + PE + T DV+S+GI+M E+ +
Sbjct: 201 KIPIRWTAPEAI-QYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R ++++++ L T+ +++ + Y
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNR-------QEVSAVVLLYMATQ------ISSAMEY 124
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 125 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPE 180
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 181 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--------------K 225
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R AC N +RP+ + + Q + +
Sbjct: 226 DYRMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 267
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 46/304 (15%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAF--QGFREFRAEMET 131
IDA+ +K+IG G FG V +L + VAIK L K + + R+F +E
Sbjct: 5 IDAS-CIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRRDFLSEASI 62
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
+G+ H NI+ + G ++I E++ENGSLD +L +ND QL
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR---KNDGRFTVIQL------- 112
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSH 251
V ++RG+ +G+ YL + +HRD+ + N+L++S+ +SDFG++R ++
Sbjct: 113 ----VGMLRGIGSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 166
Query: 252 VSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIATQ-IRPNLPVVLDGQEVG 308
T G + + PE + T DV+S+GI+M E+ + RP + Q+V
Sbjct: 167 AYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERPYWD--MSNQDV- 222
Query: 309 LLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLL 368
+ +E + +D I+ +L C ++ +RP +V +L
Sbjct: 223 ----IKAIEEGYRLPPPMDCPIALHQL-----------MLDCWQKERSDRPKFGQIVNML 267
Query: 369 DELV 372
D+L+
Sbjct: 268 DKLI 271
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 46/304 (15%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAF--QGFREFRAEMET 131
IDA+ +K+IG G FG V +L + VAIK L K + + R+F +E
Sbjct: 11 IDAS-CIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRRDFLSEASI 68
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
+G+ H NI+ + G ++I E++ENGSLD +L +ND QL
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR---KNDGRFTVIQL------- 118
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSH 251
V ++RG+ +G+ YL + +HRD+ + N+L++S+ +SDFG++R ++
Sbjct: 119 ----VGMLRGIGSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 172
Query: 252 VSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIATQ-IRPNLPVVLDGQEVG 308
T G + + PE + T DV+S+GI+M E+ + RP + Q+V
Sbjct: 173 AYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERPYWD--MSNQDV- 228
Query: 309 LLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLL 368
+ +E + +D I+ +L C ++ +RP +V +L
Sbjct: 229 ----IKAIEEGYRLPPPMDCPIALHQL-----------MLDCWQKERSDRPKFGQIVNML 273
Query: 369 DELV 372
D+L+
Sbjct: 274 DKLI 277
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 123/235 (52%), Gaps = 16/235 (6%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRA-EMETLGKL 135
+ ++ F + +G+G++ VYK ++GV VA+K++ D+ +G E+ + +L
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
+H NIV++ + L++EF++N L +++ D+ + +LN + W+
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYM-DSRTVGNTPRGLELNLVKYFQWQ-- 116
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
+ GLA+ H E I+HRD+K N+L++ + + DFGLAR + S++
Sbjct: 117 ------LLQGLAFCH--ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE 168
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLL 310
V T+ Y P+ L G+ + +D++S G ++ E+ T +P P D +++ L+
Sbjct: 169 VV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG-KPLFPGTNDEEQLKLI 221
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 18/222 (8%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSSGVT-------VAIKKLDKDAFQGFR-EFRAEMET 131
A + + + +G GSFG VY+ ++ GV VAIK +++ A R EF E
Sbjct: 23 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
+ + ++V++LG + G ++I E + G L +L S +++ + L P S
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR--SLRPEMENNP---VLAPPS 136
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHS 250
+++ +A+G+AYL+ +HRD+ + N ++ DF I DFG+ R I +T +
Sbjct: 137 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + +M PE L + T DV+SFG+++ EIAT
Sbjct: 195 RKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 41/312 (13%)
Query: 63 ASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQG 121
+ DPS E+ + TD + +G G +G VY+ +TVA+K L +D +
Sbjct: 1 GAMDPSSPNYDKWEM-ERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME- 57
Query: 122 FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGS 181
EF E + +++H N+V++LG C +I EF+ G+L +L + +R
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR------- 110
Query: 182 KQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGL 241
++++++ L T+ +++ + YL +K IHRD+ + N L+ + ++DFGL
Sbjct: 111 QEVSAVVLLYMATQ------ISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 242 ARRI--DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
+R + DT +H + + + PE L N ++ DV++FG+L+ EIAT P
Sbjct: 163 SRLMTGDTYTAHAGAKFP--IKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYP 219
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+ Q LLE D + R E V E R AC N +RP
Sbjct: 220 GIDLSQVYELLE--------------KDYRMERPEGCPEKVYELMR-ACWQWN--PSDRP 262
Query: 360 AMSYVVQLLDEL 371
+ + + Q + +
Sbjct: 263 SFAEIHQAFETM 274
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSSGVT-------VAIKKLDKDAFQGFR-EFRAEMET 131
A + + + +G GSFG VY+ ++ GV VAIK +++ A R EF E
Sbjct: 16 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTS---RNDDVDGSKQLNSLC 188
+ + ++V++LG + G ++I E + G L +L N+ V L
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--------LA 126
Query: 189 PLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DT 247
P S +++ +A+G+AYL+ +HRD+ + N ++ DF I DFG+ R I +T
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + + +M PE L + T DV+SFG+++ EIAT
Sbjct: 185 DYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 115/241 (47%), Gaps = 29/241 (12%)
Query: 68 SLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFR 126
SL +I +S L D F +++G+G++G VYK + + +G AIK +D + E +
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIK 68
Query: 127 AEMETLGKL-RHRNIVKILG----YCASGLDRVL--IYEFVENGSLDQWLHDTSRNDDVD 179
E+ L K HRNI G G+D L + EF GS+ + +T N
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT--- 125
Query: 180 GSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDF 239
L E I R + GL++LH + +IHRDIK NVLL + E + DF
Sbjct: 126 ----------LKEEWIAYICREILRGLSHLH--QHKVIHRDIKGQNVLLTENAEVKLVDF 173
Query: 240 GLARRIDTSHSHVSTQVAGTMGYMPPEYLG--GNTAATVML--DVYSFGILMIEIATQIR 295
G++ ++D + +T + GT +M PE + N AT D++S GI IE+A
Sbjct: 174 GVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
Query: 296 P 296
P
Sbjct: 233 P 233
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 44/315 (13%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAFQG 121
DP+ + ++ I+A+ + +++IG G FG V +L + VAIK L +
Sbjct: 7 DPNQAVHEFAKEIEAS-CITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEK 65
Query: 122 -FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG 180
R+F E +G+ H NI+ + G +++ E++ENGSLD +L +ND
Sbjct: 66 QRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL---KKNDGQFT 122
Query: 181 SKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFG 240
QL V ++RG++ G+ YL + +HRD+ + N+L++S+ +SDFG
Sbjct: 123 VIQL-----------VGMLRGISAGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFG 169
Query: 241 LARRIDTSHSHVSTQVAGTMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIATQ-IRPN 297
L+R ++ T G + + PE + + DV+S+GI+M E+ + RP
Sbjct: 170 LSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSAS-DVWSYGIVMWEVVSYGERPY 228
Query: 298 LPVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRE 357
W T + K +E S + A +++ C ++
Sbjct: 229 --------------WEMTNQDVIKAVEEGYRLPSPMDCPAA----LYQLMLDCWQKERNS 270
Query: 358 RPAMSYVVQLLDELV 372
RP +V +LD+L+
Sbjct: 271 RPKFDEIVNMLDKLI 285
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSSGVT-------VAIKKLDKDAFQGFR-EFRAEMET 131
A + + + +G GSFG VY+ ++ GV VAIK +++ A R EF E
Sbjct: 16 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTS---RNDDVDGSKQLNSLC 188
+ + ++V++LG + G ++I E + G L +L N+ V L
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--------LA 126
Query: 189 PLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DT 247
P S +++ +A+G+AYL+ +HRD+ + N ++ DF I DFG+ R I +T
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + + +M PE L + T DV+SFG+++ EIAT
Sbjct: 185 DYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSSGVT-------VAIKKLDKDAFQGFR-EFRAEMET 131
A + + + +G GSFG VY+ ++ GV VAIK +++ A R EF E
Sbjct: 14 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTS---RNDDVDGSKQLNSLC 188
+ + ++V++LG + G ++I E + G L +L N+ V L
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--------LA 124
Query: 189 PLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DT 247
P S +++ +A+G+AYL+ +HRD+ + N ++ DF I DFG+ R I +T
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + + +M PE L + T DV+SFG+++ EIAT
Sbjct: 183 DYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSSGVT-------VAIKKLDKDAFQGFR-EFRAEMET 131
A + + + +G GSFG VY+ ++ GV VAIK +++ A R EF E
Sbjct: 10 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTS---RNDDVDGSKQLNSLC 188
+ + ++V++LG + G ++I E + G L +L N+ V L
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--------LA 120
Query: 189 PLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DT 247
P S +++ +A+G+AYL+ +HRD+ + N ++ DF I DFG+ R I +T
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 178
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + + +M PE L + T DV+SFG+++ EIAT
Sbjct: 179 DYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 50/313 (15%)
Query: 82 DNFSTDKIIGDGSFGFVY--------KAKLSSGVTVAIKKLDKDAFQG-FREFRAEMETL 132
D K +G+G+FG V K K + VA+K L DA + + +EME +
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 133 GKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLH-------DTSRNDDVDGSKQL 184
+ +H+NI+ +LG C +I E+ G+L ++L + S N + +QL
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR 244
+S + V VA G+ YL K IHRD+ + NVL+ D I+DFGLAR
Sbjct: 141 SS------KDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 192
Query: 245 IDTSHSHVSTQVAGTMGYMPPEYLGG----NTAATVMLDVYSFGILMIEIATQIRPNLPV 300
I H+ T G +P +++ + T DV+SFG+L+ EI T P
Sbjct: 193 I----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 248
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
V + LL+ M+ SN + E + + C + +RP
Sbjct: 249 VPVEELFKLLKEGHRMDK--------PSNCT---------NELYMMMRDCWHAVPSQRPT 291
Query: 361 MSYVVQLLDELVA 373
+V+ LD +VA
Sbjct: 292 FKQLVEDLDRIVA 304
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSSGVT-------VAIKKLDKDAFQGFR-EFRAEMET 131
A + + + +G GSFG VY+ ++ GV VAIK +++ A R EF E
Sbjct: 23 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHD---TSRNDDVDGSKQLNSLC 188
+ + ++V++LG + G ++I E + G L +L N+ V L
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV--------LA 133
Query: 189 PLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DT 247
P S +++ +A+G+AYL+ +HRD+ + N ++ DF I DFG+ R I +T
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + + +M PE L + T DV+SFG+++ EIAT
Sbjct: 192 DYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSSGVT-------VAIKKLDKDAFQGFR-EFRAEMET 131
A + + + +G GSFG VY+ ++ GV VAIK +++ A R EF E
Sbjct: 45 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 103
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTS---RNDDVDGSKQLNSLC 188
+ + ++V++LG + G ++I E + G L +L N+ V L
Sbjct: 104 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--------LA 155
Query: 189 PLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DT 247
P S +++ +A+G+AYL+ +HRD+ + N ++ DF I DFG+ R I +T
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 213
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + + +M PE L + T DV+SFG+++ EIAT
Sbjct: 214 DYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSSGVT-------VAIKKLDKDAFQGFR-EFRAEMET 131
A + + + +G GSFG VY+ ++ GV VAIK +++ A R EF E
Sbjct: 17 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTS---RNDDVDGSKQLNSLC 188
+ + ++V++LG + G ++I E + G L +L N+ V L
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--------LA 127
Query: 189 PLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DT 247
P S +++ +A+G+AYL+ +HRD+ + N ++ DF I DFG+ R I +T
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 185
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + + +M PE L + T DV+SFG+++ EIAT
Sbjct: 186 DYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 50/313 (15%)
Query: 82 DNFSTDKIIGDGSFGFVY--------KAKLSSGVTVAIKKLDKDAFQG-FREFRAEMETL 132
D K +G+G+FG V K K + VA+K L DA + + +EME +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 133 GKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLH-------DTSRNDDVDGSKQL 184
+ +H+NI+ +LG C +I E+ G+L ++L + S N + +QL
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR 244
+S + V VA G+ YL K IHRD+ + NVL+ D I+DFGLAR
Sbjct: 148 SS------KDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 245 IDTSHSHVSTQVAGTMGYMPPEYLGG----NTAATVMLDVYSFGILMIEIATQIRPNLPV 300
I H+ T G +P +++ + T DV+SFG+L+ EI T P
Sbjct: 200 I----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
V + LL+ M+ SN + E + + C + +RP
Sbjct: 256 VPVEELFKLLKEGHRMDK--------PSNCT---------NELYMMMRDCWHAVPSQRPT 298
Query: 361 MSYVVQLLDELVA 373
+V+ LD +VA
Sbjct: 299 FKQLVEDLDRIVA 311
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R ++++++ L T+ +++ + Y
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNR-------QEVSAVVLLYMATQ------ISSAMEY 124
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 125 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP--IKWTAPE 180
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 181 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--------------K 225
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R AC N +RP+ + + Q + +
Sbjct: 226 DYRMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 267
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 50/313 (15%)
Query: 82 DNFSTDKIIGDGSFGFVY--------KAKLSSGVTVAIKKLDKDAFQG-FREFRAEMETL 132
D K +G+G+FG V K K + VA+K L DA + + +EME +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 133 GKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLH-------DTSRNDDVDGSKQL 184
+ +H+NI+ +LG C +I E+ G+L ++L + S N + +QL
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR 244
+S + V VA G+ YL K IHRD+ + NVL+ D I+DFGLAR
Sbjct: 148 SS------KDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 245 IDTSHSHVSTQVAGTMGYMPPEYLGG----NTAATVMLDVYSFGILMIEIATQIRPNLPV 300
I H+ T G +P +++ + T DV+SFG+L+ EI T P
Sbjct: 200 I----HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
V + LL+ M+ SN + E + + C + +RP
Sbjct: 256 VPVEELFKLLKEGHRMDK--------PSNCT---------NELYMMMRDCWHAVPSQRPT 298
Query: 361 MSYVVQLLDELVA 373
+V+ LD +VA
Sbjct: 299 FKQLVEDLDRIVA 311
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 50/313 (15%)
Query: 82 DNFSTDKIIGDGSFGFVY--------KAKLSSGVTVAIKKLDKDAFQG-FREFRAEMETL 132
D K +G+G+FG V K K + VA+K L DA + + +EME +
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 133 GKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLH-------DTSRNDDVDGSKQL 184
+ +H+NI+ +LG C +I E+ G+L ++L + S N + +QL
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR 244
+S + V VA G+ YL K IHRD+ + NVL+ D I+DFGLAR
Sbjct: 137 SS------KDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 188
Query: 245 IDTSHSHVSTQVAGTMGYMPPEYLGG----NTAATVMLDVYSFGILMIEIATQIRPNLPV 300
I H+ T G +P +++ + T DV+SFG+L+ EI T P
Sbjct: 189 I----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 244
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
V + LL+ M+ SN + E + + C + +RP
Sbjct: 245 VPVEELFKLLKEGHRMDK--------PSNCT---------NELYMMMRDCWHAVPSQRPT 287
Query: 361 MSYVVQLLDELVA 373
+V+ LD +VA
Sbjct: 288 FKQLVEDLDRIVA 300
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 50/313 (15%)
Query: 82 DNFSTDKIIGDGSFGFVY--------KAKLSSGVTVAIKKLDKDAFQG-FREFRAEMETL 132
D K +G+G+FG V K K + VA+K L DA + + +EME +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 133 GKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLH-------DTSRNDDVDGSKQL 184
+ +H+NI+ +LG C +I E+ G+L ++L + S N + +QL
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR 244
+S + V VA G+ YL K IHRD+ + NVL+ D I+DFGLAR
Sbjct: 148 SS------KDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 245 IDTSHSHVSTQVAGTMGYMPPEYLGG----NTAATVMLDVYSFGILMIEIATQIRPNLPV 300
I H+ T G +P +++ + T DV+SFG+L+ EI T P
Sbjct: 200 I----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
V + LL+ M+ SN + E + + C + +RP
Sbjct: 256 VPVEELFKLLKEGHRMDK--------PSNCT---------NELYMMMRDCWHAVPSQRPT 298
Query: 361 MSYVVQLLDELVA 373
+V+ LD +VA
Sbjct: 299 FKQLVEDLDRIVA 311
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 50/313 (15%)
Query: 82 DNFSTDKIIGDGSFGFVY--------KAKLSSGVTVAIKKLDKDAFQG-FREFRAEMETL 132
D K +G+G+FG V K K + VA+K L DA + + +EME +
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 133 GKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLH-------DTSRNDDVDGSKQL 184
+ +H+NI+ +LG C +I E+ G+L ++L + S N + +QL
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR 244
+S + V VA G+ YL K IHRD+ + NVL+ D I+DFGLAR
Sbjct: 140 SS------KDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 191
Query: 245 IDTSHSHVSTQVAGTMGYMPPEYLGG----NTAATVMLDVYSFGILMIEIATQIRPNLPV 300
I H+ T G +P +++ + T DV+SFG+L+ EI T P
Sbjct: 192 I----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 247
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
V + LL+ M+ SN + E + + C + +RP
Sbjct: 248 VPVEELFKLLKEGHRMDK--------PSNCT---------NELYMMMRDCWHAVPSQRPT 290
Query: 361 MSYVVQLLDELVA 373
+V+ LD +VA
Sbjct: 291 FKQLVEDLDRIVA 303
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSSGVT-------VAIKKLDKDAFQGFR-EFRAEMET 131
A + + + +G GSFG VY+ ++ GV VAIK +++ A R EF E
Sbjct: 13 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHD---TSRNDDVDGSKQLNSLC 188
+ + ++V++LG + G ++I E + G L +L N+ V L
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV--------LA 123
Query: 189 PLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DT 247
P S +++ +A+G+AYL+ +HRD+ + N ++ DF I DFG+ R I +T
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 181
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + + +M PE L + T DV+SFG+++ EIAT
Sbjct: 182 DYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 24/225 (10%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSSGVT-------VAIKKLDKDAFQGFR-EFRAEMET 131
A + + + +G GSFG VY+ ++ GV VAIK +++ A R EF E
Sbjct: 8 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTS---RNDDVDGSKQLNSLC 188
+ + ++V++LG + G ++I E + G L +L N+ V L
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--------LA 118
Query: 189 PLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DT 247
P S +++ +A+G+AYL+ +HRD+ + N ++ DF I DFG+ R I +T
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 176
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + +M PE L + T DV+SFG+++ EIAT
Sbjct: 177 DXXRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R ++++++ L T+ +++ + Y
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNR-------QEVSAVVLLYMATQ------ISSAMEY 126
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 127 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPE 182
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 183 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------K 227
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R AC N +RP+ + + Q + +
Sbjct: 228 DYRMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 269
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 110/218 (50%), Gaps = 13/218 (5%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
+N K +G G+FG V +A K + + VA+K L A +E +E++ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 135 L-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
L +H NIV +LG C G ++I E+ G L +L SR + D + + + LS
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN-STLSTR 164
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHV 252
+ VA G+A+L K IHRD+ + NVLL + A I DFGLAR I + S+ V
Sbjct: 165 DLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ +M PE + + TV DV+S+GIL+ EI
Sbjct: 223 KGNARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEI 259
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R ++++++ L T+ +++ + Y
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR-------QEVSAVVLLYMATQ------ISSAMEY 126
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 127 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPE 182
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------K 227
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R AC N +RP+ + + Q + +
Sbjct: 228 DYRMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 269
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 50/313 (15%)
Query: 82 DNFSTDKIIGDGSFGFVY--------KAKLSSGVTVAIKKLDKDAFQG-FREFRAEMETL 132
D K +G+G+FG V K K + VA+K L DA + + +EME +
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 133 GKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLH-------DTSRNDDVDGSKQL 184
+ +H+NI+ +LG C +I E+ G+L ++L + S N + +QL
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR 244
+S + V VA G+ YL K IHRD+ + NVL+ D I+DFGLAR
Sbjct: 189 SS------KDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 240
Query: 245 IDTSHSHVSTQVAGTMGYMPPEYLGG----NTAATVMLDVYSFGILMIEIATQIRPNLPV 300
I H+ T G +P +++ + T DV+SFG+L+ EI T P
Sbjct: 241 I----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
V + LL+ M+ SN + E + + C + +RP
Sbjct: 297 VPVEELFKLLKEGHRMDK--------PSNCT---------NELYMMMRDCWHAVPSQRPT 339
Query: 361 MSYVVQLLDELVA 373
+V+ LD +VA
Sbjct: 340 FKQLVEDLDRIVA 352
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 21/215 (9%)
Query: 89 IIGDGSFGFVYKAKLSSG---VTVAIKKLDKDAFQG-FREFRAEMETLGKL-RHRNIVKI 143
+IG+G+FG V KA++ + AIK++ + A + R+F E+E L KL H NI+ +
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 144 LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL--NSLCPLSWETRVKIVRG 201
LG C L E+ +G+L +L SR + D + + ++ LS + +
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
VA G+ YL +K IHRD+ + N+L+ ++ A I+DFGL+R + V TMG
Sbjct: 141 VARGMDYLS--QKQFIHRDLAARNILVGENYVAKIADFGLSRGQE-------VYVKKTMG 191
Query: 262 YMPPEYLG----GNTAATVMLDVYSFGILMIEIAT 292
+P ++ + T DV+S+G+L+ EI +
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 24/225 (10%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSSGVT-------VAIKKLDKDAFQGFR-EFRAEMET 131
A + + + +G GSFG VY+ ++ GV VAIK +++ A R EF E
Sbjct: 17 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTS---RNDDVDGSKQLNSLC 188
+ + ++V++LG + G ++I E + G L +L N+ V L
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--------LA 127
Query: 189 PLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DT 247
P S +++ +A+G+AYL+ +HRD+ + N ++ DF I DFG+ R I +T
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 185
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + +M PE L + T DV+SFG+++ EIAT
Sbjct: 186 DXXRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R ++++++ L T+ +++ + Y
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNR-------QEVSAVVLLYMATQ------ISSAMEY 126
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 127 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPE 182
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------K 227
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R AC N +RP+ + + Q + +
Sbjct: 228 DYRMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 269
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 35/283 (12%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R +++N++ L T+ +++ + Y
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNR-------QEVNAVVLLYMATQ------ISSAMEY 127
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYL 268
L +K IHRD+ + N L+ + ++DFGL+R + + + PE L
Sbjct: 128 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESL 185
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
N ++ DV++FG+L+ EIAT P + Q LLE D
Sbjct: 186 AYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDY 230
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ R E V E R AC N +RP+ + + Q + +
Sbjct: 231 RMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 270
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI EF+ GSL ++L + +D K L + +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQ--KHKERIDHIKLL------------QYTSQI 126
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 127 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 185 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 217
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R ++++++ L T+ +++ + Y
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR-------QEVSAVVLLYMATQ------ISSAMEY 126
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 127 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPE 182
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------K 227
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R AC N +RP+ + + Q + +
Sbjct: 228 DYRMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 269
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 35/283 (12%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R +++N++ L T+ +++ + Y
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNR-------QEVNAVVLLYMATQ------ISSAMEY 128
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYL 268
L +K IHRD+ + N L+ + ++DFGL+R + + + PE L
Sbjct: 129 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESL 186
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
N ++ DV++FG+L+ EIAT P + Q LLE D
Sbjct: 187 AYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDY 231
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ R E V E R AC N +RP+ + + Q + +
Sbjct: 232 RMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 271
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 24/225 (10%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSSGVT-------VAIKKLDKDAFQGFR-EFRAEMET 131
A + + + +G GSFG VY+ ++ GV VAIK +++ A R EF E
Sbjct: 10 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTS---RNDDVDGSKQLNSLC 188
+ + ++V++LG + G ++I E + G L +L N+ V L
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--------LA 120
Query: 189 PLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DT 247
P S +++ +A+G+AYL+ +HRD+ + N + DF I DFG+ R I +T
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET 178
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + + +M PE L + T DV+SFG+++ EIAT
Sbjct: 179 DYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 22/212 (10%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG---FREFRAEMETLGK 134
+ ++F ++G GSF VY+A+ + +G+ VAIK +DK A + + E++ +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
L+H +I+++ Y L+ E NG ++++L N + P S
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLK--------------NRVKPFSENE 113
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVST 254
+ + G+ YLH I+HRD+ SN+LL + I+DFGLA ++ H T
Sbjct: 114 ARHFMHQIITGMLYLHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT 171
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT Y+ PE + +A + DV+S G +
Sbjct: 172 -LCGTPNYISPE-IATRSAHGLESDVWSLGCM 201
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 21/215 (9%)
Query: 89 IIGDGSFGFVYKAKLSSG---VTVAIKKLDKDAFQG-FREFRAEMETLGKL-RHRNIVKI 143
+IG+G+FG V KA++ + AIK++ + A + R+F E+E L KL H NI+ +
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 144 LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL--NSLCPLSWETRVKIVRG 201
LG C L E+ +G+L +L SR + D + + ++ LS + +
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
VA G+ YL +K IHRD+ + N+L+ ++ A I+DFGL+R + V TMG
Sbjct: 151 VARGMDYLS--QKQFIHRDLAARNILVGENYVAKIADFGLSRGQE-------VYVKKTMG 201
Query: 262 YMPPEYLG----GNTAATVMLDVYSFGILMIEIAT 292
+P ++ + T DV+S+G+L+ EI +
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R +++N++ L T+ +++ + Y
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNR-------QEVNAVVLLYMATQ------ISSAMEY 330
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHR++ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 331 LE--KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPE 386
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 387 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------K 431
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R AC N +RP+ + + Q + +
Sbjct: 432 DYRMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 473
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R +++N++ L T+ +++ + Y
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNR-------QEVNAVVLLYMATQ------ISSAMEY 372
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHR++ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 373 LE--KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPE 428
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 429 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------K 473
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R AC N +RP+ + + Q + +
Sbjct: 474 DYRMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 515
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 21/220 (9%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHRNIVKILGYC 147
+G+G++G VYKAK S G VA+K++ DA A E+ L +L H NIV ++
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
S L++EF+E D + D + + +S + +++RGVA
Sbjct: 89 HSERCLTLVFEFMEK--------DLKKVLDENKTGLQDSQIKI---YLYQLLRGVA---- 133
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
H + I+HRD+K N+L++SD ++DFGLAR + +V T+ Y P+
Sbjct: 134 --HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDV 190
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
L G+ + +D++S G + E+ T +P P V D ++
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITG-KPLFPGVTDDDQL 229
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 135/313 (43%), Gaps = 50/313 (15%)
Query: 82 DNFSTDKIIGDGSFGFVY--------KAKLSSGVTVAIKKLDKDAFQG-FREFRAEMETL 132
D K +G+G+FG V K K + VA+K L DA + + +EME +
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 133 GKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLH-------DTSRNDDVDGSKQL 184
+ +H+NI+ +LG C +I E+ G+L ++L + N + +QL
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR 244
+S + V VA G+ YL K IHRD+ + NVL+ D I+DFGLAR
Sbjct: 133 SS------KDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 184
Query: 245 IDTSHSHVSTQVAGTMGYMPPEYLGG----NTAATVMLDVYSFGILMIEIATQIRPNLPV 300
I H+ T G +P +++ + T DV+SFG+L+ EI T P
Sbjct: 185 I----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 240
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
V + LL+ M+ SN + E + + C + +RP
Sbjct: 241 VPVEELFKLLKEGHRMDK--------PSNCT---------NELYMMMRDCWHAVPSQRPT 283
Query: 361 MSYVVQLLDELVA 373
+V+ LD +VA
Sbjct: 284 FKQLVEDLDRIVA 296
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 28/216 (12%)
Query: 87 DKIIGDGSFGFVYKAKLS----SGVTVAIKKLDKDAF--QGFREFRAEMETLGKLRHRNI 140
+++IG G FG V L + VAIK L K + + R+F +E +G+ H N+
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
+ + G ++I EF+ENGSLD +L +ND QL V ++R
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLR---QNDGQFTVIQL-----------VGMLR 116
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAG 258
G+A G+ YL + +HR + + N+L++S+ +SDFGL+R + DTS ++ + G
Sbjct: 117 GIAAGMKYLADMN--YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 174
Query: 259 TMG--YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + PE + T DV+S+GI+M E+ +
Sbjct: 175 KIPIRWTAPEAI-QYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 108/218 (49%), Gaps = 17/218 (7%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
+N K +G G+FG V +A K + + VA+K L A +E +E++ +
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 135 L-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
L +H NIV +LG C G ++I E+ G L +L R + D K+ PL
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR---RKAEADLDKEDGR--PLELR 152
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHV 252
+ VA G+A+L K IHRD+ + NVLL + A I DFGLAR I + S+ V
Sbjct: 153 DLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 210
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ +M PE + + TV DV+S+GIL+ EI
Sbjct: 211 KGNARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEI 247
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 21/220 (9%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHRNIVKILGYC 147
+G+G++G VYKAK S G VA+K++ DA A E+ L +L H NIV ++
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
S L++EF+E D + D + + +S + +++RGVA
Sbjct: 89 HSERCLTLVFEFMEK--------DLKKVLDENKTGLQDSQIKI---YLYQLLRGVA---- 133
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
H + I+HRD+K N+L++SD ++DFGLAR + +V T+ Y P+
Sbjct: 134 --HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDV 190
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
L G+ + +D++S G + E+ T +P P V D ++
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITG-KPLFPGVTDDDQL 229
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 135/313 (43%), Gaps = 50/313 (15%)
Query: 82 DNFSTDKIIGDGSFGFVY--------KAKLSSGVTVAIKKLDKDAFQG-FREFRAEMETL 132
D K +G+G+FG V K K + VA+K L DA + + +EME +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 133 GKL-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLH-------DTSRNDDVDGSKQL 184
+ +H+NI+ +LG C +I E+ G+L ++L + N + +QL
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR 244
+S + V VA G+ YL K IHRD+ + NVL+ D I+DFGLAR
Sbjct: 148 SS------KDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 245 IDTSHSHVSTQVAGTMGYMPPEYLGG----NTAATVMLDVYSFGILMIEIATQIRPNLPV 300
I H+ T G +P +++ + T DV+SFG+L+ EI T P
Sbjct: 200 I----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
V + LL+ M+ SN + E + + C + +RP
Sbjct: 256 VPVEELFKLLKEGHRMDK--------PSNCT---------NELYMMMRDCWHAVPSQRPT 298
Query: 361 MSYVVQLLDELVA 373
+V+ LD +VA
Sbjct: 299 FKQLVEDLDRIVA 311
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 90 IGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+GDG+FG VYKA+ + V A K +D + + ++ E++ L H NIVK+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV-RGVANGLA 207
+ ++ EF G++D + + R PL+ E+++++V + + L
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER--------------PLT-ESQIQVVCKQTLDALN 149
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
YLH + IIHRD+K+ N+L D + ++DFG++ + +T GT +M PE
Sbjct: 150 YLH--DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK-NTRXIQRRDSFIGTPYWMAPEV 206
Query: 268 LGGNTAA----TVMLDVYSFGILMIEIATQIRP 296
+ T+ DV+S GI +IE+A +I P
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMA-EIEP 238
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 108/218 (49%), Gaps = 17/218 (7%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
+N K +G G+FG V +A K + + VA+K L A +E +E++ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 135 L-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
L +H NIV +LG C G ++I E+ G L +L R + D K+ PL
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR---RKAEADLDKEDGR--PLELR 160
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHV 252
+ VA G+A+L K IHRD+ + NVLL + A I DFGLAR I + S+ V
Sbjct: 161 DLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 218
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ +M PE + + TV DV+S+GIL+ EI
Sbjct: 219 KGNARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEI 255
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 90 IGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+GDG+FG VYKA+ + V A K +D + + ++ E++ L H NIVK+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV-RGVANGLA 207
+ ++ EF G++D + + R PL+ E+++++V + + L
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER--------------PLT-ESQIQVVCKQTLDALN 149
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
YLH + IIHRD+K+ N+L D + ++DFG++ + +T GT +M PE
Sbjct: 150 YLH--DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK-NTRXIQRRDXFIGTPYWMAPEV 206
Query: 268 LGGNTAA----TVMLDVYSFGILMIEIATQIRP 296
+ T+ DV+S GI +IE+A +I P
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMA-EIEP 238
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 116/231 (50%), Gaps = 22/231 (9%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
++ E++ G+L +L + +R +++ ++ L T+ +++ + Y
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNR-------EEVTAVVLLYMATQ------ISSAMEY 145
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHRD+ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 146 LE--KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPE 201
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTME 317
L NT ++ DV++FG+L+ EIAT P + Q LLE ME
Sbjct: 202 SLAYNT-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRME 251
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 90 IGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+GDG+FG VYKA+ + V A K +D + + ++ E++ L H NIVK+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV-RGVANGLA 207
+ ++ EF G++D + + R PL+ E+++++V + + L
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER--------------PLT-ESQIQVVCKQTLDALN 149
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
YLH + IIHRD+K+ N+L D + ++DFG++ + +T GT +M PE
Sbjct: 150 YLH--DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK-NTRTIQRRDSFIGTPYWMAPEV 206
Query: 268 LGGNTAA----TVMLDVYSFGILMIEIATQIRP 296
+ T+ DV+S GI +IE+A +I P
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMA-EIEP 238
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 24/207 (11%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKK--LDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
IG+G++G VYKA+ + G T A+KK L+K+ E+ L +L+H NIVK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE--TRVKIVRGVANG 205
+ VL++E LDQ L K+L +C E T + + NG
Sbjct: 70 HTKKRLVLVFE-----HLDQDL------------KKLLDVCEGGLESVTAKSFLLQLLNG 112
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPP 265
+AY H ++ ++HRD+K N+L++ + E I+DFGLAR + +V T+ Y P
Sbjct: 113 IAYCH--DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAP 169
Query: 266 EYLGGNTAATVMLDVYSFGILMIEIAT 292
+ L G+ + +D++S G + E+
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 24/207 (11%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKK--LDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
IG+G++G VYKA+ + G T A+KK L+K+ E+ L +L+H NIVK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE--TRVKIVRGVANG 205
+ VL++E LDQ L K+L +C E T + + NG
Sbjct: 70 HTKKRLVLVFE-----HLDQDL------------KKLLDVCEGGLESVTAKSFLLQLLNG 112
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPP 265
+AY H ++ ++HRD+K N+L++ + E I+DFGLAR + +V T+ Y P
Sbjct: 113 IAYCH--DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAP 169
Query: 266 EYLGGNTAATVMLDVYSFGILMIEIAT 292
+ L G+ + +D++S G + E+
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 21/215 (9%)
Query: 89 IIGDGSFGFVYKAKLSSG---VTVAIKKLDKDAFQG-FREFRAEMETLGKL-RHRNIVKI 143
+IG+G+FG V KA++ + AIK++ + A + R+F E+E L KL H NI+ +
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 144 LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL--NSLCPLSWETRVKIVRG 201
LG C L E+ +G+L +L SR + D + + ++ LS + +
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
VA G+ YL +K IHR++ + N+L+ ++ A I+DFGL+R + V TMG
Sbjct: 148 VARGMDYLS--QKQFIHRNLAARNILVGENYVAKIADFGLSRGQE-------VYVKKTMG 198
Query: 262 YMPPEYLG----GNTAATVMLDVYSFGILMIEIAT 292
+P ++ + T DV+S+G+L+ EI +
Sbjct: 199 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 110/219 (50%), Gaps = 15/219 (6%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
+N K +G G+FG V +A K + + VA+K L A +E +E++ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 135 L-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL-NSLCPLSW 192
L +H NIV +LG C G ++I E+ G L +L SR + D + + NS S
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA--ST 163
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSH 251
+ VA G+A+L K IHRD+ + NVLL + A I DFGLAR I + S+
Sbjct: 164 RDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 252 VSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
V + +M PE + + TV DV+S+GIL+ EI
Sbjct: 222 VKGNARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEI 259
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 35/282 (12%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG G FG V+ + VAIK + + A +F E E + KL H +V++ G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
L++EF+E+G L +L T R + ET + + V G+AYL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLR-TQRG-------------LFAAETLLGMCLDVCEGMAYL 117
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLG 269
E +IHRD+ + N L+ + +SDFG+ R + ST + + PE
Sbjct: 118 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 175
Query: 270 GNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDSN 329
+ ++ DV+SFG+LM E+ ++ G + + + E
Sbjct: 176 FSRYSSKS-DVWSFGVLMWEVFSE--------------GKIPYENRSNSEVVEDISTGFR 220
Query: 330 ISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ + L+ V ++I C E+ +RPA S +++ L E+
Sbjct: 221 LYKPRLASTHV---YQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 24/207 (11%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKK--LDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
IG+G++G VYKA+ + G T A+KK L+K+ E+ L +L+H NIVK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE--TRVKIVRGVANG 205
+ VL++E LDQ L K+L +C E T + + NG
Sbjct: 70 HTKKRLVLVFE-----HLDQDL------------KKLLDVCEGGLESVTAKSFLLQLLNG 112
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPP 265
+AY H ++ ++HRD+K N+L++ + E I+DFGLAR + ++ T+ Y P
Sbjct: 113 IAYCH--DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAP 169
Query: 266 EYLGGNTAATVMLDVYSFGILMIEIAT 292
+ L G+ + +D++S G + E+
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 127
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 128 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 185
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 186 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 218
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 124/291 (42%), Gaps = 53/291 (18%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG G FG V+ + VAIK + + A +F E E + KL H +V++ G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
L++EF+E+G L +L T R + ET + + V G+AYL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR-TQRG-------------LFAAETLLGMCLDVCEGMAYL 119
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLG 269
E +IHRD+ + N L+ + +SDFG+ R + ST + + PE
Sbjct: 120 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 270 GNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDSN 329
+ ++ DV+SFG+LM E+ ++ + + N+ V +
Sbjct: 178 FSRYSSKS-DVWSFGVLMWEVFSEGK--------------------IPYENRSNSEVVED 216
Query: 330 ISREELSEAGVREY---------FRIACMCTNEKSRERPAMSYVVQLLDEL 371
IS G R Y ++I C E+ +RPA S +++ L E+
Sbjct: 217 IS------TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 122
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 123 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 180
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 181 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 213
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 113/225 (50%), Gaps = 25/225 (11%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
+N K +G G+FG V +A K + + VA+K L A +E +E++ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 135 L-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLH-------DTSRNDDVDGSKQLNS 186
L +H NIV +LG C G ++I E+ G L +L + S N + +QL+S
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 187 LCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI- 245
L + ++V A G+A+L K IHRD+ + NVLL + A I DFGLAR I
Sbjct: 166 RDLLHFSSQV------AQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 217
Query: 246 DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ S+ V + +M PE + + TV DV+S+GIL+ EI
Sbjct: 218 NDSNYIVKGNARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEI 261
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 123
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 124 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 182 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 214
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 127/290 (43%), Gaps = 45/290 (15%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
++ +K +G G FG V+ A + VA+K + K F AE + L+H +V
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 240
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
K L + +I EF+ GSL +L ++D+ GSKQ PL +
Sbjct: 241 K-LHAVVTKEPIYIITEFMAKGSLLDFL----KSDE--GSKQ-----PLP--KLIDFSAQ 286
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+A G+A++ ++ IHRD++++N+L+ + I+DFGLAR +
Sbjct: 287 IAEGMAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLAR----------VGAKFPIK 334
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNK 321
+ PE + + T+ DV+SFGIL++EI T R P + + + + LE M
Sbjct: 335 WTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR--- 390
Query: 322 EIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
E E + I C + ERP Y+ +LD+
Sbjct: 391 --------------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 426
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 30/222 (13%)
Query: 90 IGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVKILGYC 147
+G G FG+V + +G VAIK+ ++ RE + E++ + KL H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA-REV 80
Query: 148 ASGLDRV-------LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
GL ++ L E+ E G L ++L+ Q + C L ++
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLN------------QFENCCGLKEGPIRTLLS 128
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA---HISDFGLARRIDTSHSHVSTQVA 257
+++ L YLH E IIHRD+K N++L + I D G A+ +D + T+
Sbjct: 129 DISSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFV 184
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
GT+ Y+ PE L TV +D +SFG L E T RP LP
Sbjct: 185 GTLQYLAPELLE-QKKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 121
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 122 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 179
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 180 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 212
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 111/248 (44%), Gaps = 34/248 (13%)
Query: 73 SMSELIDATDNFSTDKIIGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFREFRAEMET 131
SM I + +++G G FG K +G + +K+L + + R F E++
Sbjct: 1 SMPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKV 60
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
+ L H N++K +G I E+++ G+L + K ++S P
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII------------KSMDSQYP-- 106
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLA--------- 242
W RV + +A+G+AYLH + IIHRD+ S N L+ + ++DFGLA
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164
Query: 243 ----RRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPN- 297
R + V G +M PE + G + +DV+SFGI++ EI ++ +
Sbjct: 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDE-KVDVFSFGIVLCEIIGRVNADP 223
Query: 298 --LPVVLD 303
LP +D
Sbjct: 224 DYLPRTMD 231
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 39/285 (13%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G VY+ +TVA+K L +D + EF E + +++H N+V++LG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
+I EF+ G+L +L + +R ++++++ L T+ +++ + Y
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNR-------QEVSAVVLLYMATQ------ISSAMEY 333
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPPE 266
L +K IHR++ + N L+ + ++DFGL+R + DT +H + + + PE
Sbjct: 334 LE--KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPE 389
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L N ++ DV++FG+L+ EIAT P + Q LLE
Sbjct: 390 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------K 434
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
D + R E V E R AC N +RP+ + + Q + +
Sbjct: 435 DYRMERPEGCPEKVYELMR-ACWQWN--PSDRPSFAEIHQAFETM 476
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 154
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 155 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 212
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 213 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 245
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 30/222 (13%)
Query: 90 IGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVKILGYC 147
+G G FG+V + +G VAIK+ ++ RE + E++ + KL H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA-REV 81
Query: 148 ASGLDRV-------LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
GL ++ L E+ E G L ++L+ Q + C L ++
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLN------------QFENCCGLKEGPIRTLLS 129
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA---HISDFGLARRIDTSHSHVSTQVA 257
+++ L YLH E IIHRD+K N++L + I D G A+ +D + T+
Sbjct: 130 DISSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFV 185
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
GT+ Y+ PE L TV +D +SFG L E T RP LP
Sbjct: 186 GTLQYLAPELLE-QKKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 42/310 (13%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + KL H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 141 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPE-YLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
AR I + + A + +MPPE ++ G T D +SFG+L+ EI +
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEG--IFTSKTDTWSFGVLLWEIFS------- 241
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+G + + N+E+ ++ R + + +RI C + +RP
Sbjct: 242 -------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 291
Query: 360 AMSYVVQLLD 369
+ +++ ++
Sbjct: 292 NFAIILERIE 301
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 123
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 124 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 182 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 124/291 (42%), Gaps = 53/291 (18%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG G FG V+ + VAIK + + A +F E E + KL H +V++ G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
L++EF+E+G L +L T R + ET + + V G+AYL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLR-TQRG-------------LFAAETLLGMCLDVCEGMAYL 122
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLG 269
E +IHRD+ + N L+ + +SDFG+ R + ST + + PE
Sbjct: 123 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 180
Query: 270 GNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDSN 329
+ ++ DV+SFG+LM E+ ++ + + N+ V +
Sbjct: 181 FSRYSSKS-DVWSFGVLMWEVFSEGK--------------------IPYENRSNSEVVED 219
Query: 330 ISREELSEAGVREY---------FRIACMCTNEKSRERPAMSYVVQLLDEL 371
IS G R Y ++I C E+ +RPA S +++ L E+
Sbjct: 220 IS------TGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 42/310 (13%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + KL H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 155 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPE-YLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
AR I + + A + +MPPE ++ G T D +SFG+L+ EI +
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEG--IFTSKTDTWSFGVLLWEIFS------- 255
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+G + + N+E+ ++ R + + +RI C + +RP
Sbjct: 256 -------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 305
Query: 360 AMSYVVQLLD 369
+ +++ ++
Sbjct: 306 NFAIILERIE 315
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 126
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 127 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 185 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 217
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + + +D K L + +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--AHAERIDHIKLL------------QYTSQI 126
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 127 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 185 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 123/284 (43%), Gaps = 35/284 (12%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG G FG V+ + VAIK + + A +F E E + KL H +V++ G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
L++EF+E+G L +L T R + ET + + V G+AYL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR-TQRG-------------LFAAETLLGMCLDVCEGMAYL 119
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLG 269
E +IHRD+ + N L+ + +SDFG+ R + ST + + PE
Sbjct: 120 E--EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 270 GNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDSN 329
+ ++ DV+SFG+LM E+ ++ G + + + E
Sbjct: 178 FSRYSSKS-DVWSFGVLMWEVFSE--------------GKIPYENRSNSEVVEDISTGFR 222
Query: 330 ISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDELVA 373
+ + L+ V ++I C E+ +RPA S +++ L + A
Sbjct: 223 LYKPRLASTHV---YQIMNHCWKERPEDRPAFSRLLRQLAAIAA 263
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 130
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 131 CKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 188
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 189 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 221
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 129
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 130 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 187
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 188 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 220
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 128
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 129 CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 186
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 187 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 219
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 35/282 (12%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG G FG V+ + VAIK + K+ +F E E + KL H +V++ G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
L++EF+E+G L +L T R + ET + + V G+AYL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLR-TQRG-------------LFAAETLLGMCLDVCEGMAYL 139
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLG 269
E +IHRD+ + N L+ + +SDFG+ R + ST + + PE
Sbjct: 140 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 197
Query: 270 GNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDSN 329
+ ++ DV+SFG+LM E+ ++ G + + + E
Sbjct: 198 FSRYSSKS-DVWSFGVLMWEVFSE--------------GKIPYENRSNSEVVEDISTGFR 242
Query: 330 ISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ + L+ V ++I C E+ +RPA S +++ L E+
Sbjct: 243 LYKPRLASTHV---YQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 141
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 142 CKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 200 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 232
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKL---DKDAFQGFREFRAEMETLGKLRHRNIVKILG 145
+G G VY A+ + + VAIK + ++ + + F E+ +L H+NIV ++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 146 YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANG 205
L+ E++E +L +++ S PLS +T + + +G
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYI---------------ESHGPLSVDTAINFTNQILDG 123
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPP 265
+ + H + I+HRDIK N+L+DS+ I DFG+A+ + + + V GT+ Y P
Sbjct: 124 IKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSP 181
Query: 266 EYLGGNTAATVMLDVYSFGILMIEI 290
E G A D+YS GI++ E+
Sbjct: 182 EQAKGE-ATDECTDIYSIGIVLYEM 205
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 141
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHRD+ + N+L++++ I DFGL + + D V +
Sbjct: 142 CKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 200 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 232
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 123
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT--M 260
G+ YL K IHRD+ + N+L++++ I DFGL + + + G +
Sbjct: 124 CKGMEYLG--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 182 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 214
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 106/214 (49%), Gaps = 27/214 (12%)
Query: 90 IGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILG-YC 147
+GDG+FG VYKAK +G A K ++ + + ++ E+E L H IVK+LG Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
G ++I EF G++D + + R Q+ +C R + L
Sbjct: 87 HDGKLWIMI-EFCPGGAVDAIMLELDRGL---TEPQIQVVC-----------RQMLEALN 131
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGL-ARRIDTSHSHVSTQVAGTMGYMPPE 266
+LH K IIHRD+K+ NVL+ + + ++DFG+ A+ + T S GT +M PE
Sbjct: 132 FLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPE 187
Query: 267 YL----GGNTAATVMLDVYSFGILMIEIATQIRP 296
+ +T D++S GI +IE+A QI P
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMA-QIEP 220
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 44/311 (14%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + K H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 140 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPEYL--GGNTAATVMLDVYSFGILMIEIATQIRPNL 298
AR I + + A + +MPPE G T+ T D +SFG+L+ EI +
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT---DTWSFGVLLWEIFS------ 240
Query: 299 PVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRER 358
+G + + N+E+ ++ R + + +RI C + +R
Sbjct: 241 --------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 289
Query: 359 PAMSYVVQLLD 369
P + +++ ++
Sbjct: 290 PNFAIILERIE 300
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 142/318 (44%), Gaps = 59/318 (18%)
Query: 83 NFSTDKIIGDGSFGFVYKA-----KLSSG-VTVAIKKLDKDAFQG-FREFRAEMETLGKL 135
N K +G+G FG V KA K +G TVA+K L ++A R+ +E L ++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSR-----------------NDDV 178
H +++K+ G C+ +LI E+ + GSL +L ++ + +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 179 DGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISD 238
+ + + L +W+ ++ G+ YL E ++HRD+ + N+L+ + ISD
Sbjct: 144 ERALTMGDLISFAWQ--------ISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 239 FGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNT----AATVMLDVYSFGILMIEIATQI 294
FGL+R + S+V + G +P +++ + T DV+SFG+L+ EI T
Sbjct: 194 FGLSRDVYEEDSYVKR----SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 295 RPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEK 354
P + + LL+ ME + N S E +R+ C ++
Sbjct: 250 GNPYPGIPPERLFNLLKTGHRMERPD--------NCS---------EEMYRLMLQCWKQE 292
Query: 355 SRERPAMSYVVQLLDELV 372
+RP + + + L++++
Sbjct: 293 PDKRPVFADISKDLEKMM 310
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 44/311 (14%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + K H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 140 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPEYL--GGNTAATVMLDVYSFGILMIEIATQIRPNL 298
AR I + + A + +MPPE G T+ T D +SFG+L+ EI +
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT---DTWSFGVLLWEIFS------ 240
Query: 299 PVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRER 358
+G + + N+E+ ++ R + + +RI C + +R
Sbjct: 241 --------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 289
Query: 359 PAMSYVVQLLD 369
P + +++ ++
Sbjct: 290 PNFAIILERIE 300
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+KKL + R+F E+E L L+H NIVK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G C S R LI E++ GSL +L + +D K L + +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLL------------QYTSQI 124
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTM 260
G+ YL K IHR++ + N+L++++ I DFGL + + D + V +
Sbjct: 125 CKGMEYLGT--KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI 182
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQI 294
+ PE L + +V DV+SFG+++ E+ T I
Sbjct: 183 FWYAPESL-TESKFSVASDVWSFGVVLYELFTYI 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 106/214 (49%), Gaps = 27/214 (12%)
Query: 90 IGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILG-YC 147
+GDG+FG VYKAK +G A K ++ + + ++ E+E L H IVK+LG Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
G ++I EF G++D + + R Q+ +C R + L
Sbjct: 79 HDGKLWIMI-EFCPGGAVDAIMLELDRGL---TEPQIQVVC-----------RQMLEALN 123
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGL-ARRIDTSHSHVSTQVAGTMGYMPPE 266
+LH K IIHRD+K+ NVL+ + + ++DFG+ A+ + T S GT +M PE
Sbjct: 124 FLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPE 179
Query: 267 YL----GGNTAATVMLDVYSFGILMIEIATQIRP 296
+ +T D++S GI +IE+A QI P
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEMA-QIEP 212
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 44/311 (14%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + K H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 132 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 181
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPEYL--GGNTAATVMLDVYSFGILMIEIATQIRPNL 298
AR I + + A + +MPPE G T+ T D +SFG+L+ EI +
Sbjct: 182 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT---DTWSFGVLLWEIFS------ 232
Query: 299 PVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRER 358
+G + + N+E+ ++ R + + +RI C + +R
Sbjct: 233 --------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 281
Query: 359 PAMSYVVQLLD 369
P + +++ ++
Sbjct: 282 PNFAIILERIE 292
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 90 IGDGSFGFVYKAK-LSSGVTVAIKK--LDKDAFQGFREFRAEMETLGKLRHRNIVKILGY 146
IG+G++G V+KAK + VA+K+ LD D E+ L +L+H+NIV++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 147 CASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGL 206
S L++EF + L ++ S N D+D E + + GL
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYF--DSCNGDLDP------------EIVKSFLFQLLKGL 114
Query: 207 AYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE 266
+ H + ++HRD+K N+L++ + E ++DFGLAR S +V T+ Y PP+
Sbjct: 115 GFCHS--RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPD 171
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
L G + +D++S G + E+A RP P
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAARPLFP 204
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 42/310 (13%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + K H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 141 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPE-YLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
AR I + + A + +MPPE ++ G T D +SFG+L+ EI +
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEG--IFTSKTDTWSFGVLLWEIFS------- 241
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+G + + N+E+ ++ R + + +RI C + +RP
Sbjct: 242 -------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 291
Query: 360 AMSYVVQLLD 369
+ +++ ++
Sbjct: 292 NFAIILERIE 301
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKK-LDKDAFQGFREFRA-EMETLGKLR 136
+ + + ++G+GS+G V K + +G VAIKK L+ D + ++ E++ L +LR
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCP--LSWET 194
H N+V +L C L++EFV++ LD L P L ++
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDL-----------------ELFPNGLDYQV 125
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVST 254
K + + NG+ + H IIHRDIK N+L+ + DFG AR +
Sbjct: 126 VQKYLFQIINGIGFCHS--HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD 183
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+VA T Y PE L G+ +DV++ G L+ E+
Sbjct: 184 EVA-TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 42/310 (13%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + K H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 157 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 206
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPE-YLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
AR I + + A + +MPPE ++ G T D +SFG+L+ EI +
Sbjct: 207 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEG--IFTSKTDTWSFGVLLWEIFS------- 257
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+G + + N+E+ ++ R + + +RI C + +RP
Sbjct: 258 -------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 307
Query: 360 AMSYVVQLLD 369
+ +++ ++
Sbjct: 308 NFAIILERIE 317
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 42/310 (13%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + K H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 155 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPE-YLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
AR I + + A + +MPPE ++ G T D +SFG+L+ EI +
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEG--IFTSKTDTWSFGVLLWEIFS------- 255
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+G + + N+E+ ++ R + + +RI C + +RP
Sbjct: 256 -------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 305
Query: 360 AMSYVVQLLD 369
+ +++ ++
Sbjct: 306 NFAIILERIE 315
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 42/310 (13%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + K H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 146
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 147 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 196
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPE-YLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
AR I + + A + +MPPE ++ G T D +SFG+L+ EI +
Sbjct: 197 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEG--IFTSKTDTWSFGVLLWEIFS------- 247
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+G + + N+E+ ++ R + + +RI C + +RP
Sbjct: 248 -------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 297
Query: 360 AMSYVVQLLD 369
+ +++ ++
Sbjct: 298 NFAIILERIE 307
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 42/310 (13%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + K H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 155 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPE-YLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
AR I + + A + +MPPE ++ G T D +SFG+L+ EI +
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEG--IFTSKTDTWSFGVLLWEIFS------- 255
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+G + + N+E+ ++ R + + +RI C + +RP
Sbjct: 256 -------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 305
Query: 360 AMSYVVQLLD 369
+ +++ ++
Sbjct: 306 NFAIILERIE 315
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 42/310 (13%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + K H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 181 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 230
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPE-YLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
AR I + + A + +MPPE ++ G T D +SFG+L+ EI +
Sbjct: 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEG--IFTSKTDTWSFGVLLWEIFS------- 281
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+G + + N+E+ ++ R + + +RI C + +RP
Sbjct: 282 -------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 331
Query: 360 AMSYVVQLLD 369
+ +++ ++
Sbjct: 332 NFAIILERIE 341
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 25/216 (11%)
Query: 88 KIIGD-GSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILG 145
+IIG+ G FG VYKA+ + V A K +D + + ++ E++ L H NIVK+L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 146 YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV-RGVAN 204
+ ++ EF G++D + + R PL+ E+++++V + +
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELER--------------PLT-ESQIQVVCKQTLD 119
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMP 264
L YLH + IIHRD+K+ N+L D + ++DFG++ + + GT +M
Sbjct: 120 ALNYLH--DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMA 177
Query: 265 PEYLGGNTAA----TVMLDVYSFGILMIEIATQIRP 296
PE + T+ DV+S GI +IE+A +I P
Sbjct: 178 PEVVMCETSKDRPYDYKADVWSLGITLIEMA-EIEP 212
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 44/311 (14%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 47 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 106
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + K H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 166
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 167 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 216
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPEYL--GGNTAATVMLDVYSFGILMIEIATQIRPNL 298
AR I + + A + +MPPE G T+ T D +SFG+L+ EI +
Sbjct: 217 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT---DTWSFGVLLWEIFS------ 267
Query: 299 PVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRER 358
+G + + N+E+ ++ R + + +RI C + +R
Sbjct: 268 --------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 316
Query: 359 PAMSYVVQLLD 369
P + +++ ++
Sbjct: 317 PNFAIILERIE 327
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 141/318 (44%), Gaps = 59/318 (18%)
Query: 83 NFSTDKIIGDGSFGFVYKA-----KLSSG-VTVAIKKLDKDAFQG-FREFRAEMETLGKL 135
N K +G+G FG V KA K +G TVA+K L ++A R+ +E L ++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSR-----------------NDDV 178
H +++K+ G C+ +LI E+ + GSL +L ++ + +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 179 DGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISD 238
+ + + L +W+ ++ G+ YL E ++HRD+ + N+L+ + ISD
Sbjct: 144 ERALTMGDLISFAWQ--------ISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 239 FGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNT----AATVMLDVYSFGILMIEIATQI 294
FGL+R + S V + G +P +++ + T DV+SFG+L+ EI T
Sbjct: 194 FGLSRDVYEEDSXVKR----SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 295 RPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEK 354
P + + LL+ ME + N S E +R+ C ++
Sbjct: 250 GNPYPGIPPERLFNLLKTGHRMERPD--------NCS---------EEMYRLMLQCWKQE 292
Query: 355 SRERPAMSYVVQLLDELV 372
+RP + + + L++++
Sbjct: 293 PDKRPVFADISKDLEKMM 310
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 42/310 (13%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + K H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 158 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 207
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPE-YLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
AR I + + A + +MPPE ++ G T D +SFG+L+ EI +
Sbjct: 208 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEG--IFTSKTDTWSFGVLLWEIFS------- 258
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+G + + N+E+ ++ R + + +RI C + +RP
Sbjct: 259 -------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 308
Query: 360 AMSYVVQLLD 369
+ +++ ++
Sbjct: 309 NFAIILERIE 318
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 116/221 (52%), Gaps = 30/221 (13%)
Query: 88 KIIGDGSFGFVYKAKLS----SGVTVAIK--KLDKDAFQGFREFRAEMETLGKLRHRNIV 141
KI+G+G FG V + L + + VA+K KLD + + EF +E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 142 KILGYC----ASGLDR-VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
++LG C + G+ + ++I F++ G L +L SR + G K + PL +T +
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL-YSRLET--GPKHI----PL--QTLL 150
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
K + +A G+ YL + +HRD+ + N +L D ++DFGL+++I + + ++
Sbjct: 151 KFMVDIALGMEYLSN--RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRI 208
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIATQ 293
A MP +++ + A T DV++FG+ M EIAT+
Sbjct: 209 AK----MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 141/318 (44%), Gaps = 59/318 (18%)
Query: 83 NFSTDKIIGDGSFGFVYKA-----KLSSG-VTVAIKKLDKDAFQG-FREFRAEMETLGKL 135
N K +G+G FG V KA K +G TVA+K L ++A R+ +E L ++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSR-----------------NDDV 178
H +++K+ G C+ +LI E+ + GSL +L ++ + +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 179 DGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISD 238
+ + + L +W+ ++ G+ YL E ++HRD+ + N+L+ + ISD
Sbjct: 144 ERALTMGDLISFAWQ--------ISQGMQYL--AEMSLVHRDLAARNILVAEGRKMKISD 193
Query: 239 FGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNT----AATVMLDVYSFGILMIEIATQI 294
FGL+R + S V + G +P +++ + T DV+SFG+L+ EI T
Sbjct: 194 FGLSRDVYEEDSXVKR----SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 295 RPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEK 354
P + + LL+ ME + N S E +R+ C ++
Sbjct: 250 GNPYPGIPPERLFNLLKTGHRMERPD--------NCS---------EEMYRLMLQCWKQE 292
Query: 355 SRERPAMSYVVQLLDELV 372
+RP + + + L++++
Sbjct: 293 PDKRPVFADISKDLEKMM 310
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIK-----KLDKDAFQGFREFRAEMETLGKL 135
D+F + +G G FG VY A+ + +A+K +L+K+ + + R E+E L
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHL 71
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ Y L+ EF G L + L R D+ + + L
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL-------- 123
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
A+ L Y H E+ +IHRDIK N+L+ E I+DFG + + S
Sbjct: 124 -------ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVH---APSLRRRX 171
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT+ Y+PPE + G T +D++ G+L E + P
Sbjct: 172 MCGTLDYLPPEMIEGKTHDE-KVDLWCAGVLCYEFLVGMPP 211
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 123/291 (42%), Gaps = 53/291 (18%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
IG G FG V+ + VAIK + + A +F E E + KL H +V++ G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
L+ EF+E+G L +L T R + ET + + V G+AYL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLR-TQRG-------------LFAAETLLGMCLDVCEGMAYL 120
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLG 269
E +IHRD+ + N L+ + +SDFG+ R + ST + + PE
Sbjct: 121 E--EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 178
Query: 270 GNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDSN 329
+ ++ DV+SFG+LM E+ ++ + + N+ V +
Sbjct: 179 FSRYSSKS-DVWSFGVLMWEVFSEGK--------------------IPYENRSNSEVVED 217
Query: 330 ISREELSEAGVREY---------FRIACMCTNEKSRERPAMSYVVQLLDEL 371
IS G R Y ++I C E+ +RPA S +++ L E+
Sbjct: 218 IS------TGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIK-----KLDKDAFQGFREFRAEMETLGKL 135
D+F + +G G FG VY A+ + +A+K +L+K+ + + R E+E L
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHL 72
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ Y L+ EF G L + L R D+ + + L
Sbjct: 73 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL-------- 124
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
A+ L Y H E+ +IHRDIK N+L+ E I+DFG + + S
Sbjct: 125 -------ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVH---APSLRRRX 172
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT+ Y+PPE + G T +D++ G+L E + P
Sbjct: 173 MCGTLDYLPPEMIEGKTHDE-KVDLWCAGVLCYEFLVGMPP 212
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 40/228 (17%)
Query: 88 KIIGDGSFGFVYKAKLSSG-VTVAIKKL-DKDAFQGFREFRAEMETLGKLRHRNIVKILG 145
+I G FG V+KA+L + V V I L DK ++Q RE T G ++H N+++ +
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREI---FSTPG-MKHENLLQFIA 76
Query: 146 YCASG----LDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
G ++ LI F + GSL +L ++W +
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLKGNI----------------ITWNELCHVAET 120
Query: 202 VANGLAYLH---------GLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
++ GL+YLH G + I HRD KS NVLL SD A ++DFGLA R +
Sbjct: 121 MSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPG 180
Query: 253 STQ-VAGTMGYMPPEYLGG----NTAATVMLDVYSFGILMIEIATQIR 295
T GT YM PE L G A + +D+Y+ G+++ E+ ++ +
Sbjct: 181 DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCK 228
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
+N K +G G+FG V +A K + + VA+K L A +E +E++ +
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 135 L-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSR---------NDDVDGSKQL 184
L +H NIV +LG C G ++I E+ G L +L + D +G +
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR 244
+ PL + VA G+A+L K IHRD+ + NVLL + A I DFGLAR
Sbjct: 151 DGR-PLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 245 I-DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
I + S+ V + +M PE + + TV DV+S+GIL+ EI
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEI 253
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 17/222 (7%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQ-GFREFRAEMETLGKLRHRN 139
D++ ++IG G+ V A + VAIK+++ + Q E E++ + + H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 140 IVKILGYCASGLDRVLIYEFVENGS-LDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
IV + L+ + + GS LD H ++ + G L T I
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV--------LDESTIATI 121
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFG----LARRIDTSHSHVST 254
+R V GL YLH + IHRD+K+ N+LL D I+DFG LA D + + V
Sbjct: 122 LREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 179
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
GT +M PE + D++SFGI IE+AT P
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 17/222 (7%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQ-GFREFRAEMETLGKLRHRN 139
D++ ++IG G+ V A + VAIK+++ + Q E E++ + + H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 140 IVKILGYCASGLDRVLIYEFVENGS-LDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
IV + L+ + + GS LD H ++ + G L T I
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV--------LDESTIATI 126
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFG----LARRIDTSHSHVST 254
+R V GL YLH + IHRD+K+ N+LL D I+DFG LA D + + V
Sbjct: 127 LREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 184
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
GT +M PE + D++SFGI IE+AT P
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 21/252 (8%)
Query: 53 DLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAI 111
DL S L +A+ + ++ ++ D ++ IG+G++G V A + + V VAI
Sbjct: 2 DLGSDELMAAAAAAGAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAI 61
Query: 112 KKLDKDAFQGF--REFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWL 169
KK+ Q + R R E++ L + RH NI+ I + + R E +++ + Q L
Sbjct: 62 KKISPFEHQTYCQRTLR-EIKILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDL 115
Query: 170 HDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLD 229
+T D K L + LS + + + GL Y+H ++HRD+K SN+LL+
Sbjct: 116 MET------DLYKLLKTQH-LSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLN 166
Query: 230 SDFEAHISDFGLARRIDTSHSHVS--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
+ + I DFGLAR D H H T+ T Y PE + + T +D++S G ++
Sbjct: 167 TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 226
Query: 288 IEIATQIRPNLP 299
E+ + RP P
Sbjct: 227 AEMLSN-RPIFP 237
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 111/239 (46%), Gaps = 23/239 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
+N K++G G+FG V A K + VA+K L + A RE +E++ + +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 135 L-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRN---DDVDGSKQL-----N 185
L H NIV +LG C LI+E+ G L +L D+++ Q
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 186 SLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
L L++E + VA G+ +L K +HRD+ + NVL+ I DFGLAR I
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 246 DTSHSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI---ATQIRPNLPV 300
+ ++V A + +M PE L T+ DV+S+GIL+ EI P +PV
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESL-FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 123/284 (43%), Gaps = 37/284 (13%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
K +G+G FG V+ + VAIK L K F E + + KL+H +V++
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYA-V 72
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
S ++ E++ GSL +L D G + L L V + VA G+A
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLKD--------GEGRALKLPNL-----VDMAAQVAAGMA 119
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE- 266
Y+ + IHRD++S+N+L+ + I+DFGLAR I+ + + + PE
Sbjct: 120 YIERMN--YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEA 177
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L G T+ DV+SFGIL+ E+ T+ R P + + + + +E M
Sbjct: 178 ALYGRF--TIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQ------ 229
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
D IS EL C + ERP Y+ L++
Sbjct: 230 DCPISLHEL-----------MIHCWKKDPEERPTFEYLQSFLED 262
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIK-----KLDKDAFQGFREFRAEMETLGKL 135
D+F + +G G FG VY A+ + +A+K +L+K+ + + R E+E L
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHL 71
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
RH NI+++ Y L+ EF G L + L R D+ + + L
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL-------- 123
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
A+ L Y H E+ +IHRDIK N+L+ E I+DFG + + S
Sbjct: 124 -------ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVH---APSLRRRX 171
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT+ Y+PPE + G T +D++ G+L E + P
Sbjct: 172 MCGTLDYLPPEMIEGKTHDE-KVDLWCAGVLCYEFLVGMPP 211
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 73
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L + +L L V + +A+G+AY+
Sbjct: 74 EEPIXIVTEYMSKGSLLDFL-----KGETGKYLRLPQL--------VDMAAQIASGMAYV 120
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 121 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 178
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 179 YGRF--TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 236
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C ++ ERP Y+ L++
Sbjct: 237 -----------------LMCQCWRKEPEERPTFEYLQAFLED 261
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 39/287 (13%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
K +G G FG V K VAIK + K+ EF E + + L H +V++ G C
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
+I E++ NG L +L + ++QL +C + V +
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQ---TQQLLEMC-----------KDVCEAME 114
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
YL K +HRD+ + N L++ +SDFGL+R + S + + PPE
Sbjct: 115 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 172
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
L + ++ D+++FG+LM EI + +G + + R + E
Sbjct: 173 LMYSKFSSKS-DIWAFGVLMWEIYS--------------LGKMPYERFTNSETAEHIAQG 217
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPA----MSYVVQLLDE 370
+ R L+ V + I C +EK+ ERP +S ++ ++DE
Sbjct: 218 LRLYRPHLASEKV---YTIMYSCWHEKADERPTFKILLSNILDVMDE 261
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 39/287 (13%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
K +G G FG V K VAIK + K+ EF E + + L H +V++ G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
+I E++ NG L +L + ++QL +C + V +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQ---TQQLLEMC-----------KDVCEAME 134
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
YL K +HRD+ + N L++ +SDFGL+R + S + + PPE
Sbjct: 135 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEV 192
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
L + ++ D+++FG+LM EI + +G + + R + E
Sbjct: 193 LMYSKFSSKS-DIWAFGVLMWEIYS--------------LGKMPYERFTNSETAEHIAQG 237
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPA----MSYVVQLLDE 370
+ R L+ V + I C +EK+ ERP +S ++ ++DE
Sbjct: 238 LRLYRPHLASEKV---YTIMYSCWHEKADERPTFKILLSNILDVMDE 281
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 20/212 (9%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D R E++ + KL H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 76
Query: 142 KI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI-V 199
++ + +SG + ++Y + + + ++ +R+ S+ +L P+ + VK+ +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLYM 128
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVAG 258
+ LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 129 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 184
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++I E++ GSL +L ++ +L L V + +A+G+AY+
Sbjct: 85 EPIYIVI-EYMSKGSLLDFL-----KGEMGKYLRLPQL--------VDMAAQIASGMAYV 130
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 131 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 188
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 189 YGRF--TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C + ERP Y+ L++
Sbjct: 247 -----------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 80
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 81 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 128
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 129 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 187 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 234
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 23 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 81
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 82 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 129
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 130 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 187
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 188 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 235
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 14 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 72
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 73 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 120
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 121 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 178
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 179 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 226
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 79
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 80 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 127
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 128 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 77
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 78 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 125
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 126 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 184 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 231
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 42/310 (13%)
Query: 73 SMSELIDAT-DNFSTDKIIGDGSFGFVYKAKLS------SGVTVAIKKLDK-DAFQGFRE 124
S+S+L + N + + +G G+FG VY+ ++S S + VA+K L + + Q +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 125 FRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
F E + K H+NIV+ +G L R ++ E + G L +L +T S +
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGL 241
L + + R +A G YL E IHRDI + N LL A I DFG+
Sbjct: 141 LDL--------LHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 242 ARRIDTSHSHVSTQVAG-TMGYMPPE-YLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
A+ I + + A + +MPPE ++ G T D +SFG+L+ EI +
Sbjct: 191 AQDIYRASYYRKGGCAMLPVKWMPPEAFMEG--IFTSKTDTWSFGVLLWEIFS------- 241
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
+G + + N+E+ ++ R + + +RI C + +RP
Sbjct: 242 -------LGYMPYP---SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 291
Query: 360 AMSYVVQLLD 369
+ +++ ++
Sbjct: 292 NFAIILERIE 301
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 73
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 74 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 121
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 122 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 75
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 76 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 123
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 124 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 75
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 76 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 123
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 124 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 73
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 74 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 121
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 122 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 79
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 80 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 127
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 128 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 39/287 (13%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
K +G G FG V K VAIK + K+ EF E + + L H +V++ G C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
+I E++ NG L +L + ++QL +C + V +
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQ---TQQLLEMC-----------KDVCEAME 118
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
YL K +HRD+ + N L++ +SDFGL+R + S + + PPE
Sbjct: 119 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 176
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
L + ++ D+++FG+LM EI + +G + + R + E
Sbjct: 177 LMYSKFSSKS-DIWAFGVLMWEIYS--------------LGKMPYERFTNSETAEHIAQG 221
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPA----MSYVVQLLDE 370
+ R L+ V + I C +EK+ ERP +S ++ ++DE
Sbjct: 222 LRLYRPHLASEKV---YTIMYSCWHEKADERPTFKILLSNILDVMDE 265
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGK 134
+ + +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
L H NIVK+L + L++EF+ S+D D +D S PL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL---SMDL-------KDFMDASALTGIPLPLIKSY 111
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVST 254
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR
Sbjct: 112 LFQLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
+V T+ Y PE L G + +D++S G + E+ T+
Sbjct: 166 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 203
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 31/218 (14%)
Query: 90 IGDGSFGFVYKAK-LSSGVTVAIKK-LDKDAFQGFR-EFRAEMETLGKLRHRNIVKILGY 146
IG G+FG V+KA+ +G VA+KK L ++ +GF E++ L L+H N+V ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 147 C---ASGLDRV-----LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
C AS +R L+++F E+ D+ G N L + ++
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH--------------DLAGLLS-NVLVKFTLSEIKRV 130
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++ + NGL Y+H I+HRD+K++NVL+ D ++DFGLAR + + +
Sbjct: 131 MQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 259 ---TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PPE L G +D++ G +M E+ T+
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 39/287 (13%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
K +G G FG V K VAIK + K+ EF E + + L H +V++ G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
+I E++ NG L +L + ++QL +C + V +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQ---TQQLLEMC-----------KDVCEAME 134
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
YL K +HRD+ + N L++ +SDFGL+R + S + + PPE
Sbjct: 135 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 192
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
L + ++ D+++FG+LM EI + +G + + R + E
Sbjct: 193 LMYSKFSSKS-DIWAFGVLMWEIYS--------------LGKMPYERFTNSETAEHIAQG 237
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPA----MSYVVQLLDE 370
+ R L+ V + I C +EK+ ERP +S ++ ++DE
Sbjct: 238 LRLYRPHLASEKV---YTIMYSCWHEKADERPTFKILLSNILDVMDE 281
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 33/230 (14%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKK-LDKDAFQGF--REFRAEMETLGK 134
D + IG G+FG V+KA+ +G VA+KK L ++ +GF R E++ L
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQL 72
Query: 135 LRHRNIVKILGYC---ASGLDRV-----LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNS 186
L+H N+V ++ C AS +R L+++F E+ D+ G N
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH--------------DLAGLLS-NV 117
Query: 187 LCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID 246
L + ++++ + NGL Y+H I+HRD+K++NVL+ D ++DFGLAR
Sbjct: 118 LVKFTLSEIKRVMQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFS 175
Query: 247 TSHSHVSTQVAG---TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
+ + + T+ Y PPE L G +D++ G +M E+ T+
Sbjct: 176 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 33/230 (14%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKK-LDKDAFQGF--REFRAEMETLGK 134
D + IG G+FG V+KA+ +G VA+KK L ++ +GF R E++ L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQL 73
Query: 135 LRHRNIVKILGYC---ASGLDRV-----LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNS 186
L+H N+V ++ C AS +R L+++F E+ D+ G N
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH--------------DLAGLLS-NV 118
Query: 187 LCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID 246
L + ++++ + NGL Y+H I+HRD+K++NVL+ D ++DFGLAR
Sbjct: 119 LVKFTLSEIKRVMQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
Query: 247 TSHSHVSTQVAG---TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
+ + + T+ Y PPE L G +D++ G +M E+ T+
Sbjct: 177 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 39/287 (13%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
K +G G FG V K VAIK + K+ EF E + + L H +V++ G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
+I E++ NG L +L + ++QL +C + V +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQ---TQQLLEMC-----------KDVCEAME 119
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
YL K +HRD+ + N L++ +SDFGL+R + S + + PPE
Sbjct: 120 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 177
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
L + ++ D+++FG+LM EI + +G + + R + E
Sbjct: 178 LMYSKFSSKS-DIWAFGVLMWEIYS--------------LGKMPYERFTNSETAEHIAQG 222
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPA----MSYVVQLLDE 370
+ R L+ V + I C +EK+ ERP +S ++ ++DE
Sbjct: 223 LRLYRPHLASEKV---YTIMYSCWHEKADERPTFKILLSNILDVMDE 266
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 76
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L + +L L V + +A+G+AY+
Sbjct: 77 EEPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQL--------VDMAAQIASGMAYV 123
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 124 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 181
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 182 YGRF--TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 239
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C ++ ERP Y+ L++
Sbjct: 240 -----------------LMCQCWRKEPEERPTFEYLQAFLED 264
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 75
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 76 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 123
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 124 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 75
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 76 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 123
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 124 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 133/310 (42%), Gaps = 43/310 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
+ S K +G G+FG V +A K + +TVA+K L A RE +E++ L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 135 L-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
L H NIV +LG C G ++I E+ G L +L + D SK ++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDDEL 163
Query: 194 TRVKIVRG-----VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
VA G+A+L K IHRD+ + N+LL I DFGLAR I
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKND 221
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIE---IATQIRPNLPVVLDG 304
++V A + +M PE + N T DV+S+GI + E + + P +PV D
Sbjct: 222 SNYVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV--DS 278
Query: 305 QEVGLL-EWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSY 363
+ ++ E R + + EM D I C + +RP
Sbjct: 279 KFYKMIKEGFRMLSPEHAPAEMYD------------------IMKTCWDADPLKRPTFKQ 320
Query: 364 VVQLLDELVA 373
+VQL+++ ++
Sbjct: 321 IVQLIEKQIS 330
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKIL 79
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 80 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 127
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 128 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++I E++ GSL +L ++ +L L V + +A+G+AY+
Sbjct: 85 EPIYIVI-EYMSKGSLLDFL-----KGEMGKYLRLPQL--------VDMAAQIASGMAYV 130
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 131 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 189 YGRF--TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C + ERP Y+ L++
Sbjct: 247 -----------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGK 134
+ + +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
L H NIVK+L + L++EF+ S+D D +D S PL
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL---SMDL-------KDFMDASALTGIPLPLIKSY 110
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVST 254
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR
Sbjct: 111 LFQLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
+V T+ Y PE L G + +D++S G + E+ T+
Sbjct: 165 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 202
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 95
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 96 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 143
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 144 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 201
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 202 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 249
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 79
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L LS
Sbjct: 80 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKCQ-HLSN 127
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 128 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 31/229 (13%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKK-LDKDAFQGFR-EFRAEMETLGKL 135
D + IG G+FG V+KA+ +G VA+KK L ++ +GF E++ L L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 136 RHRNIVKILGYC---ASGLDRV-----LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL 187
+H N+V ++ C AS +R L+++F E+ D+ G N L
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH--------------DLAGLLS-NVL 119
Query: 188 CPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDT 247
+ ++++ + NGL Y+H I+HRD+K++NVL+ D ++DFGLAR
Sbjct: 120 VKFTLSEIKRVMQMLLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
Query: 248 SHSHVSTQVAG---TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
+ + + T+ Y PPE L G +D++ G +M E+ T+
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 118/242 (48%), Gaps = 23/242 (9%)
Query: 59 LFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIK 112
+F S+ F P ++S ++ + + +G GSFG VY+ K + VA+K
Sbjct: 1 VFPSSVFVPDEWEVSREKI-------TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVK 53
Query: 113 KLDKDAFQGFR-EFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHD 171
+++ A R EF E + ++V++LG + G +++ E + +G L +L
Sbjct: 54 TVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
Query: 172 TSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSD 231
+ + + P + + +++ +A+G+AYL+ K +HRD+ + N ++ D
Sbjct: 114 LRPEAENNPGRP-----PPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHD 166
Query: 232 FEAHISDFGLARRI-DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
F I DFG+ R I +T++ + + +M PE L + T D++SFG+++ EI
Sbjct: 167 FTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESL-KDGVFTTSSDMWSFGVVLWEI 225
Query: 291 AT 292
+
Sbjct: 226 TS 227
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 75
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 76 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 123
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 124 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHT 181
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 39/287 (13%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
K +G G FG V K VAIK + K+ EF E + + L H +V++ G C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
+I E++ NG L +L + ++QL +C + V +
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQ---TQQLLEMC-----------KDVCEAME 125
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
YL K +HRD+ + N L++ +SDFGL+R + S + + PPE
Sbjct: 126 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 183
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
L + ++ D+++FG+LM EI + +G + + R + E
Sbjct: 184 LMYSKFSSKS-DIWAFGVLMWEIYS--------------LGKMPYERFTNSETAEHIAQG 228
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPA----MSYVVQLLDE 370
+ R L+ V + I C +EK+ ERP +S ++ ++DE
Sbjct: 229 LRLYRPHLASEKV---YTIMYSCWHEKADERPTFKILLSNILDVMDE 272
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L + +L L V + +A+G+AY+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQL--------VDMAAQIASGMAYV 296
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 297 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 355 YGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 412
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C ++ ERP Y+ L++
Sbjct: 413 -----------------LMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L + +L L V + +A+G+AY+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQL--------VDMAAQIASGMAYV 296
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 297 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 355 YGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 412
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C ++ ERP Y+ L++
Sbjct: 413 -----------------LMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 74
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L ++ +L L V + +A+G+AY+
Sbjct: 75 EEPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQL--------VDMAAQIASGMAYV 121
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 122 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 179
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 180 YGRF--TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 237
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C + ERP Y+ L++
Sbjct: 238 -----------------LMCQCWRKDPEERPTFEYLQAFLED 262
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 90 IGDGSFGFVYKAK-LSSGVTVAIKK--LDKDAFQGFREFRAEMETLGKLRHRNIVKILGY 146
IG+G++G V+KAK + VA+K+ LD D E+ L +L+H+NIV++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 147 CASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGL 206
S L++EF + L ++ S N D+D E + + GL
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYF--DSCNGDLDP------------EIVKSFLFQLLKGL 114
Query: 207 AYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE 266
+ H + ++HRD+K N+L++ + E +++FGLAR S +V T+ Y PP+
Sbjct: 115 GFCHS--RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPD 171
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
L G + +D++S G + E+A RP P
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGF---REFRAEMETLGKLRH 137
D+F + +G G FG VY A+ S VA+K L K + + R E+E L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NI+++ Y LI E+ G L K+L C +
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGEL---------------YKELQKSCTFDEQRTAT 127
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
I+ +A+ L Y HG K +IHRDIK N+LL E I+DFG + + S +
Sbjct: 128 IMEELADALMYCHG--KKVIHRDIKPENLLLGLKGELKIADFGWSVH---APSLRRKTMC 182
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT+ Y+PPE + G +D++ G+L E+
Sbjct: 183 GTLDYLPPEMIEGRMHNE-KVDLWCIGVLCYEL 214
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 72
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L ++ +L L V + +A+G+AY+
Sbjct: 73 EEPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQL--------VDMAAQIASGMAYV 119
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 120 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 177
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 178 YGRF--TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 235
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C + ERP Y+ L++
Sbjct: 236 -----------------LMCQCWRKDPEERPTFEYLQAFLED 260
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
K +G G FG V K VA+K + K+ EF E +T+ KL H +VK G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
+ ++ E++ NG L +L + + QL +C V G+A
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLE---PSQLLEMC-----------YDVCEGMA 118
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQVAGTMGYMPP 265
+L + IHRD+ + N L+D D +SDFG+ R + D S V T+ + + P
Sbjct: 119 FLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP--VKWSAP 174
Query: 266 E---YLGGNTAATVMLDVYSFGILMIEI 290
E Y ++ + DV++FGILM E+
Sbjct: 175 EVFHYFKYSSKS----DVWAFGILMWEV 198
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 80
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L + +L L +S + +A+G+AY+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFL-----KGETGKYLRLPQLVDMSAQ--------IASGMAYV 127
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 128 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 185
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 186 YGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 243
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C ++ ERP Y+ L++
Sbjct: 244 -----------------LMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF LH + D +D S PL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLK-DFMDASALTGIPLPLIKSYLF 110
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 111 QLLQG----LAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L ++ +L L V + +A+G+AY+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQL--------VDMAAQIASGMAYV 130
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 131 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 189 YGRF--TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C + ERP Y+ L++
Sbjct: 247 -----------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L ++ +L L V + +A+G+AY+
Sbjct: 84 EEPIYIVCEYMSKGSLLDFL-----KGEMGKYLRLPQL--------VDMAAQIASGMAYV 130
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 131 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 189 YGRF--TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C + ERP Y+ L++
Sbjct: 247 -----------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 80
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L + +L L +S + +A+G+AY+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFL-----KGETGKYLRLPQLVDMSAQ--------IASGMAYV 127
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 128 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAAL 185
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 186 YGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 243
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C ++ ERP Y+ L++
Sbjct: 244 -----------------LMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAI+K+ Q + R R E++ L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR-EIKIL 79
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 80 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 127
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 128 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 133/310 (42%), Gaps = 43/310 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
+ S K +G G+FG V +A K + +TVA+K L A RE +E++ L
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 135 L-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
L H NIV +LG C G ++I E+ G L +L + D SK ++
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDDEL 140
Query: 194 TRVKIVRG-----VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
VA G+A+L K IHRD+ + N+LL I DFGLAR I
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIE---IATQIRPNLPVVLDG 304
++V A + +M PE + N T DV+S+GI + E + + P +PV D
Sbjct: 199 SNYVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV--DS 255
Query: 305 QEVGLL-EWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSY 363
+ ++ E R + + EM D I C + +RP
Sbjct: 256 KFYKMIKEGFRMLSPEHAPAEMYD------------------IMKTCWDADPLKRPTFKQ 297
Query: 364 VVQLLDELVA 373
+VQL+++ ++
Sbjct: 298 IVQLIEKQIS 307
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 133/310 (42%), Gaps = 43/310 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
+ S K +G G+FG V +A K + +TVA+K L A RE +E++ L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 135 L-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
L H NIV +LG C G ++I E+ G L +L + D SK ++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDDEL 163
Query: 194 TRVKIVRG-----VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
VA G+A+L K IHRD+ + N+LL I DFGLAR I
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 221
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIE---IATQIRPNLPVVLDG 304
++V A + +M PE + N T DV+S+GI + E + + P +PV D
Sbjct: 222 SNYVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV--DS 278
Query: 305 QEVGLL-EWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSY 363
+ ++ E R + + EM D I C + +RP
Sbjct: 279 KFYKMIKEGFRMLSPEHAPAEMYD------------------IMKTCWDADPLKRPTFKQ 320
Query: 364 VVQLLDELVA 373
+VQL+++ ++
Sbjct: 321 IVQLIEKQIS 330
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 133/310 (42%), Gaps = 43/310 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
+ S K +G G+FG V +A K + +TVA+K L A RE +E++ L
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 135 L-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
L H NIV +LG C G ++I E+ G L +L + D SK ++
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDDEL 158
Query: 194 TRVKIVRG-----VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
VA G+A+L K IHRD+ + N+LL I DFGLAR I
Sbjct: 159 ALDLEDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 216
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIE---IATQIRPNLPVVLDG 304
++V A + +M PE + N T DV+S+GI + E + + P +PV D
Sbjct: 217 SNYVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV--DS 273
Query: 305 QEVGLL-EWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSY 363
+ ++ E R + + EM D I C + +RP
Sbjct: 274 KFYKMIKEGFRMLSPEHAPAEMYD------------------IMKTCWDADPLKRPTFKQ 315
Query: 364 VVQLLDELVA 373
+VQL+++ ++
Sbjct: 316 IVQLIEKQIS 325
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 77
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 78 LAFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 125
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 126 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 184 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 231
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 117/242 (48%), Gaps = 23/242 (9%)
Query: 59 LFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIK 112
+F S+ F P ++S ++ + + +G GSFG VY+ K + VA+K
Sbjct: 1 VFPSSVFVPDEWEVSREKI-------TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVK 53
Query: 113 KLDKDAFQGFR-EFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHD 171
+++ A R EF E + ++V++LG + G +++ E + +G L +L
Sbjct: 54 TVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
Query: 172 TSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSD 231
+ + + P + + +++ +A+G+AYL+ K +HRD+ + N ++ D
Sbjct: 114 LRPEAENNPGRP-----PPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHD 166
Query: 232 FEAHISDFGLARRI-DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
F I DFG+ R I +T + + + +M PE L + T D++SFG+++ EI
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL-KDGVFTTSSDMWSFGVVLWEI 225
Query: 291 AT 292
+
Sbjct: 226 TS 227
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L + +L L V + +A+G+AY+
Sbjct: 250 EEPIYIVGEYMSKGSLLDFL-----KGETGKYLRLPQL--------VDMAAQIASGMAYV 296
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 297 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 355 YGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 412
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C ++ ERP Y+ L++
Sbjct: 413 -----------------LMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 133/310 (42%), Gaps = 43/310 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
+ S K +G G+FG V +A K + +TVA+K L A RE +E++ L
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 135 L-RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
L H NIV +LG C G ++I E+ G L +L + D SK ++
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDDEL 156
Query: 194 TRVKIVRG-----VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
VA G+A+L K IHRD+ + N+LL I DFGLAR I
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 214
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIE---IATQIRPNLPVVLDG 304
++V A + +M PE + N T DV+S+GI + E + + P +PV D
Sbjct: 215 SNYVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV--DS 271
Query: 305 QEVGLL-EWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSY 363
+ ++ E R + + EM D I C + +RP
Sbjct: 272 KFYKMIKEGFRMLSPEHAPAEMYD------------------IMKTCWDADPLKRPTFKQ 313
Query: 364 VVQLLDELVA 373
+VQL+++ ++
Sbjct: 314 IVQLIEKQIS 323
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 332
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L + +L L V + +A+G+AY+
Sbjct: 333 EEPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQL--------VDMAAQIASGMAYV 379
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 380 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 437
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 438 YGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 495
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C ++ ERP Y+ L++
Sbjct: 496 -----------------LMCQCWRKEPEERPTFEYLQAFLED 520
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 20/212 (9%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D R E++ + KL H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 76
Query: 142 KI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI-V 199
++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLYM 128
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVAG 258
+ LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 129 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 184
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 20/212 (9%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D R E++ + KL H NIV
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 77
Query: 142 KI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI-V 199
++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+ +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLYM 129
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVAG 258
+ LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 130 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 185
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 186 SRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 217
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++EF+ L +++ D S PL ++
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLFQL 119
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G LA+ H ++HRD+K N+L++++ ++DFGLAR + +V
Sbjct: 120 LQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV- 172
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 173 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTR 207
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 20/212 (9%)
Query: 89 IIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILG-Y 146
++G G++G VY + LS+ V +AIK++ + + + E+ L+H+NIV+ LG +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 147 CASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGL 206
+G ++ + E V GSL L S+ + ++Q + + GL
Sbjct: 89 SENGFIKIFM-EQVPGGSLSALLR--SKWGPLKDNEQTIGF----------YTKQILEGL 135
Query: 207 AYLHGLEKPIIHRDIKSSNVLLDS-DFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPP 265
YLH + I+HRDIK NVL+++ ISDFG ++R+ + T GT+ YM P
Sbjct: 136 KYLH--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAP 192
Query: 266 EYL-GGNTAATVMLDVYSFGILMIEIATQIRP 296
E + G D++S G +IE+AT P
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 20/212 (9%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D R E++ + KL H NIV
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 84
Query: 142 KI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI-V 199
++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+ +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLYM 136
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVAG 258
+ LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 137 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 192
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 20/212 (9%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D R E++ + KL H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 76
Query: 142 KI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI-V 199
++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLYM 128
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVAG 258
+ LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 129 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 184
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 20/212 (9%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D R E++ + KL H NIV
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 95
Query: 142 KI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI-V 199
++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+ +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLYM 147
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVAG 258
+ LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 148 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 203
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 235
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 20/212 (9%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D R E++ + KL H NIV
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 89
Query: 142 KI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI-V 199
++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+ +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLYM 141
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVAG 258
+ LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 142 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YIC 197
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 198 SRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 229
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++EF+ L +++ D S PL ++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLFQL 112
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G LA+ H ++HRD+K N+L++++ ++DFGLAR + +V
Sbjct: 113 LQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV- 165
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 166 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 22/213 (10%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFR-AEMETLGKLRHRNI 140
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D + F+ E++ + KL H NI
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 141 VKI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI- 198
V++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLY 161
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVA 257
+ + LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 162 MYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--I 217
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 250
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 20/212 (9%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D R E++ + KL H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 76
Query: 142 KI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI-V 199
++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLYM 128
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVAG 258
+ LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 129 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YIC 184
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 20/212 (9%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D R E++ + KL H NIV
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 88
Query: 142 KI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI-V 199
++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+ +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLYM 140
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVAG 258
+ LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 141 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 196
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 228
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 22/213 (10%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFR-AEMETLGKLRHRNI 140
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D + F+ E++ + KL H NI
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 141 VKI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI- 198
V++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLY 161
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVA 257
+ + LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 162 MYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YI 217
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 250
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 22/213 (10%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFR-AEMETLGKLRHRNI 140
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D + F+ E++ + KL H NI
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 141 VKI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI- 198
V++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLY 139
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVA 257
+ + LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 140 MYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--I 195
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 196 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 228
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 22/213 (10%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA-EMETLGKLRHRNI 140
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D + F+ E++ + KL H NI
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 103
Query: 141 VKI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI- 198
V++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLY 155
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVA 257
+ + LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 156 MYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YI 211
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 212 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 244
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 90 IGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLRHRNIVK 142
+G GSFG VY+ K + VA+K +++ A R EF E + ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+LG + G +++ E + +G L +L + + + P + + +++ +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP-----PPTLQEMIQMAAEI 138
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHVSTQVAGTMG 261
A+G+AYL+ K +HRD+ + N ++ DF I DFG+ R I +T + + +
Sbjct: 139 ADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+M PE L + T D++SFG+++ EI +
Sbjct: 197 WMAPESL-KDGVFTTSSDMWSFGVVLWEITS 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 77
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 78 LAFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 125
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 126 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHT 183
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 184 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 231
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 116/242 (47%), Gaps = 23/242 (9%)
Query: 59 LFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIK 112
+F S+ F P ++S ++ + + +G GSFG VY+ K + VA+K
Sbjct: 1 VFPSSVFVPDEWEVSREKI-------TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVK 53
Query: 113 KLDKDAFQGFR-EFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHD 171
+++ A R EF E + ++V++LG + G +++ E + +G L +L
Sbjct: 54 TVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
Query: 172 TSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSD 231
+ + + P + + +++ +A+G+AYL+ K +HRD+ + N ++ D
Sbjct: 114 LRPEAENNPGRP-----PPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHD 166
Query: 232 FEAHISDFGLARRI-DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
F I DFG+ R I +T + + +M PE L + T D++SFG+++ EI
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL-KDGVFTTSSDMWSFGVVLWEI 225
Query: 291 AT 292
+
Sbjct: 226 TS 227
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 22/213 (10%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFR-AEMETLGKLRHRNI 140
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D + F+ E++ + KL H NI
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 80
Query: 141 VKI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI- 198
V++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLY 132
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVA 257
+ + LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 133 MYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YI 188
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 189 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 221
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 22/213 (10%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFR-AEMETLGKLRHRNI 140
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D + F+ E++ + KL H NI
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 111
Query: 141 VKI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI- 198
V++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLY 163
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVA 257
+ + LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 164 MYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YI 219
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 220 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 252
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++EF+ L +++ D S PL ++
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLFQL 119
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G LA+ H ++HRD+K N+L++++ ++DFGLAR + +V
Sbjct: 120 LQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV- 172
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 173 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 207
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 20/212 (9%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D R E++ + KL H NIV
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 80
Query: 142 KI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI-V 199
++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+ +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLYM 132
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVAG 258
+ LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 133 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--IC 188
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 20/212 (9%)
Query: 89 IIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILG-Y 146
++G G++G VY + LS+ V +AIK++ + + + E+ L+H+NIV+ LG +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 147 CASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGL 206
+G ++ + E V GSL L S+ + ++Q + + GL
Sbjct: 75 SENGFIKIFM-EQVPGGSLSALLR--SKWGPLKDNEQTIGF----------YTKQILEGL 121
Query: 207 AYLHGLEKPIIHRDIKSSNVLLDS-DFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPP 265
YLH + I+HRDIK NVL+++ ISDFG ++R+ + T GT+ YM P
Sbjct: 122 KYLH--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAP 178
Query: 266 EYL-GGNTAATVMLDVYSFGILMIEIATQIRP 296
E + G D++S G +IE+AT P
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++EF+ L +++ D S PL ++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLFQL 111
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G LA+ H ++HRD+K N+L++++ ++DFGLAR + +V
Sbjct: 112 LQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV- 164
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLF 111
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR + +V
Sbjct: 112 QLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 165
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 166 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++EF+ L +++ D S PL ++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLFQL 112
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G LA+ H ++HRD+K N+L++++ ++DFGLAR + +V
Sbjct: 113 LQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV- 165
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++EF+ L +++ D S PL ++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLFQL 111
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G LA+ H ++HRD+K N+L++++ ++DFGLAR + +V
Sbjct: 112 LQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV- 164
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 199
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 21/220 (9%)
Query: 77 LIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLG 133
L+D +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L
Sbjct: 3 LVD-MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 134 KLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
+L H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKS 111
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS 253
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +
Sbjct: 112 YLFQLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 165
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
+V T+ Y PE L G + +D++S G + E+ T+
Sbjct: 166 HEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++EF+ L +++ D S PL ++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLFQL 112
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G LA+ H ++HRD+K N+L++++ ++DFGLAR + +V
Sbjct: 113 LQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV- 165
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + K+RH +V++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYA-VVS 83
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L ++ +L L V + +A+G+AY+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQL--------VDMAAQIASGMAYV 130
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 131 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 189 YGRF--TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C + ERP Y+ L++
Sbjct: 247 -----------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 114/256 (44%), Gaps = 53/256 (20%)
Query: 60 FDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAF 119
++A+ +PSL DN ++IG G +G VYK L VA+K
Sbjct: 1 MEAAASEPSLD----------LDNLKLLELIGRGRYGAVYKGSLDER-PVAVKVFSFANR 49
Query: 120 QGFREFRAEMETLGKLRHRNIVK-ILG---YCASG-LDRVLIYEFVENGSLDQWLHDTSR 174
Q F + + + + H NI + I+G A G ++ +L+ E+ NGSL ++L
Sbjct: 50 QNFINEK-NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----- 103
Query: 175 NDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLH------GLEKPII-HRDIKSSNVL 227
SL W + ++ V GLAYLH KP I HRD+ S NVL
Sbjct: 104 -----------SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVL 152
Query: 228 LDSDFEAHISDFGLARRIDTS-------HSHVSTQVAGTMGYMPPEYLGG------NTAA 274
+ +D ISDFGL+ R+ + + + GT+ YM PE L G +A
Sbjct: 153 VKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESA 212
Query: 275 TVMLDVYSFGILMIEI 290
+D+Y+ G++ EI
Sbjct: 213 LKQVDMYALGLIYWEI 228
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 27/241 (11%)
Query: 56 SIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKL 114
++AL + SFD + D D + + IG+G++G V A+ +G VAIKK+
Sbjct: 38 NLALLKARSFDVTF---------DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI 88
Query: 115 DK--DAFQGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDT 172
D + E++ L +H NI+ I + ++ V G ++
Sbjct: 89 PNAFDVVTNAKRTLRELKILKHFKHDNIIAI---------KDILRPTVPYGEFKS-VYVV 138
Query: 173 SRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDF 232
+ D + ++S PL+ E + + GL Y+H + +IHRD+K SN+L++ +
Sbjct: 139 LDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENC 196
Query: 233 EAHISDFGLARRIDTS---HSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
E I DFG+AR + TS H + T+ T Y PE + T +D++S G + E
Sbjct: 197 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGE 256
Query: 290 I 290
+
Sbjct: 257 M 257
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
D + K +G G+FG V +A K ++ TVA+K L + A E RA M L L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS--EHRALMSELKIL 84
Query: 136 ----RHRNIVKILGYCAS-GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPL 190
H N+V +LG C G ++I EF + G+L +L + RN+ V L
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKDLYKDF--L 141
Query: 191 SWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHS 250
+ E + VA G+ +L + IHRD+ + N+LL I DFGLAR I
Sbjct: 142 TLEHLIXYSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPD 199
Query: 251 HVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+V A + +M PE + + T+ DV+SFG+L+ EI
Sbjct: 200 YVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEI 239
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
D K +G G+FG V +A K ++ TVA+K L + A E RA M L L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKIL 86
Query: 136 ----RHRNIVKILGYCAS-GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCP- 189
H N+V +LG C G ++I EF + G+L +L + RN+ V + L
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKEAPEDLYKD 145
Query: 190 -LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
L+ E + VA G+ +L + IHRD+ + N+LL I DFGLAR I
Sbjct: 146 FLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 203
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+V A + +M PE + + T+ DV+SFG+L+ EI
Sbjct: 204 PDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEI 245
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 90 IGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLRHRNIVK 142
+G GSFG VY+ K + VA+K +++ A R EF E + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+LG + G +++ E + +G L +L + + + P + + +++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP-----PPTLQEMIQMAAEI 139
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHVSTQVAGTMG 261
A+G+AYL+ K +HRD+ + N ++ DF I DFG+ R I +T + +
Sbjct: 140 ADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+M PE L + T D++SFG+++ EI +
Sbjct: 198 WMAPESL-KDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 90 IGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLRHRNIVK 142
+G GSFG VY+ K + VA+K +++ A R EF E + ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+LG + G +++ E + +G L +L + + + P + + +++ +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP-----PPTLQEMIQMAAEI 136
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHVSTQVAGTMG 261
A+G+AYL+ K +HRD+ + N ++ DF I DFG+ R I +T + +
Sbjct: 137 ADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+M PE L + T D++SFG+++ EI +
Sbjct: 195 WMAPESL-KDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 22/213 (10%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKK-LDKDAFQGFREFRAEMETLGKLRHRNI 140
+++ K+IG+GSFG VY+AKL SG VAIKK L AF+ E++ + KL H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----RELQIMRKLDHCNI 75
Query: 141 VKI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI- 198
V++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLY 127
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVA 257
+ + LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 128 MYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YI 183
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 22/213 (10%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFR-AEMETLGKLRHRNI 140
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D + F+ E++ + KL H NI
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 113
Query: 141 VKI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI- 198
V++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLY 165
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVA 257
+ + LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 166 MYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YI 221
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 222 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 254
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L ++ +L L V + +A+G+AY+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQL--------VDMAAQIASGMAYV 130
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD+ ++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 131 ERMN--YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 189 YGRF--TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C + ERP Y+ L++
Sbjct: 247 -----------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 79
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 80 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 127
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 128 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 186 GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
D + K +G G+FG V +A K ++ TVA+K L + A E RA M L L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS--EHRALMSELKIL 84
Query: 136 ----RHRNIVKILGYCAS-GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPL 190
H N+V +LG C G ++I EF + G+L +L + RN+ V L
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKDLYKDF--L 141
Query: 191 SWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHS 250
+ E + VA G+ +L + IHRD+ + N+LL I DFGLAR I
Sbjct: 142 TLEHLICYSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 199
Query: 251 HVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+V A + +M PE + + T+ DV+SFG+L+ EI
Sbjct: 200 YVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEI 239
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 80
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ I + + R E +++ + Q L +T D K L + LS
Sbjct: 81 LRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET------DLYKLLKTQH-LSN 128
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 129 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 187 GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 234
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 22/213 (10%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKK-LDKDAFQGFREFRAEMETLGKLRHRNI 140
+++ K+IG+GSFG VY+AKL SG VAIKK L AF+ E++ + KL H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----RELQIMRKLDHCNI 75
Query: 141 VKI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI- 198
V++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLY 127
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVA 257
+ + LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 128 MYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YI 183
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ G L +L ++ +L L V + +A+G+AY+
Sbjct: 84 EEPIYIVMEYMSKGCLLDFL-----KGEMGKYLRLPQL--------VDMAAQIASGMAYV 130
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 131 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 189 YGRF--TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C + ERP Y+ L++
Sbjct: 247 -----------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 114/273 (41%), Gaps = 35/273 (12%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
K +G G FG V K VAIK + K+ EF E + + L H +V++ G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
+I E++ NG L +L + ++QL +C + V +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQ---TQQLLEMC-----------KDVCEAME 119
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY 267
YL K +HRD+ + N L++ +SDFGL+R + S + + PPE
Sbjct: 120 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEV 177
Query: 268 LGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVD 327
L + ++ D+++FG+LM EI + +G + + R + E
Sbjct: 178 LMYSKFSSKS-DIWAFGVLMWEIYS--------------LGKMPYERFTNSETAEHIAQG 222
Query: 328 SNISREELSEAGVREYFRIACMCTNEKSRERPA 360
+ R L+ V + I C +EK+ ERP
Sbjct: 223 LRLYRPHLASEKV---YTIMYSCWHEKADERPT 252
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 22/213 (10%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFR-AEMETLGKLRHRNI 140
+++ K+IG+GSFG VY+AKL SG VAIKK+ +D + F+ E++ + KL H NI
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 154
Query: 141 VKI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI- 198
V++ + +SG + +Y + + + ++ +R+ S+ +L P+ + VK+
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTL-PVIY---VKLY 206
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVA 257
+ + LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 207 MYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YI 262
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 263 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 295
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGK 134
+ + +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
L H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSY 111
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVST 254
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR
Sbjct: 112 LFQLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
+V T+ Y PE L G + +D++S G + E+ T+
Sbjct: 166 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 203
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 27/242 (11%)
Query: 55 SSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKK 113
++AL + SFD + D D + + IG+G++G V A+ +G VAIKK
Sbjct: 36 KNLALLKARSFDVTF---------DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKK 86
Query: 114 LDK--DAFQGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHD 171
+ D + E++ L +H NI+ I + ++ V G ++
Sbjct: 87 IPNAFDVVTNAKRTLRELKILKHFKHDNIIAI---------KDILRPTVPYGEFKS-VYV 136
Query: 172 TSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSD 231
+ D + ++S PL+ E + + GL Y+H + +IHRD+K SN+L++ +
Sbjct: 137 VLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNEN 194
Query: 232 FEAHISDFGLARRIDTS---HSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMI 288
E I DFG+AR + TS H + T+ T Y PE + T +D++S G +
Sbjct: 195 CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 254
Query: 289 EI 290
E+
Sbjct: 255 EM 256
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGK 134
+ + +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
L H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSY 112
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVST 254
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR
Sbjct: 113 LFQLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 166
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
+V T+ Y PE L G + +D++S G + E+ T+
Sbjct: 167 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 204
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 27/212 (12%)
Query: 84 FSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVK 142
F + +G+GS+G VYKA +G VAIK++ ++ +E E+ + + ++VK
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVK 88
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G D ++ E+ GS+ + ++ L+ + I++
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--------------LTEDEIATILQST 134
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
GL YLH + K IHRDIK+ N+LL+++ A ++DFG+A ++ T V GT +
Sbjct: 135 LKGLEYLHFMRK--IHRDIKAGNILLNTEGHAKLADFGVAGQL-TDXMAKRNXVIGTPFW 191
Query: 263 MPPEY---LGGNTAATVMLDVYSFGILMIEIA 291
M PE +G N A D++S GI IE+A
Sbjct: 192 MAPEVIQEIGYNCVA----DIWSLGITAIEMA 219
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ G L +L ++ +L L V + +A+G+AY+
Sbjct: 84 EEPIYIVTEYMSKGCLLDFL-----KGEMGKYLRLPQL--------VDMAAQIASGMAYV 130
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGLAR I+ + + + PE L
Sbjct: 131 ERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 189 YGRF--TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 246
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C + ERP Y+ L++
Sbjct: 247 -----------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLF 110
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 111 QLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 90 IGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
IG+GS G V A+ SG VA+K +D Q E+ + +H N+V++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
G + ++ EF++ G+L + N++ Q+ ++C V LAY
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVRLNEE-----QIATVC-----------EAVLQALAY 156
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYL 268
LH + +IHRDIKS ++LL D +SDFG +I + GT +M PE +
Sbjct: 157 LHA--QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVI 213
Query: 269 GGNTAATVMLDVYSFGILMIEIA 291
+ AT +D++S GI++IE+
Sbjct: 214 SRSLYAT-EVDIWSLGIMVIEMV 235
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLF 112
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 113 QLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 167 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLF 110
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 111 QLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++EF+ L +++ D S PL ++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLFQL 111
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 112 LQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 164
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 199
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGK 134
+ + +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
L H NIVK+L + L++EF+ S+D +D S PL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL---SMDL-------KKFMDASALTGIPLPLIKSY 111
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVST 254
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR
Sbjct: 112 LFQLLQG----LAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
+V T+ Y PE L G + +D++S G + E+ T+
Sbjct: 166 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 203
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLF 112
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 113 QLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 167 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLF 110
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 111 QLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLF 112
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 113 QLLQG----LAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 167 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLF 111
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 112 QLLQG----LAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 166 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLF 113
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 114 QLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 168 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++EF+ L +++ D S PL ++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLFQL 111
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 112 LQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 164
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 199
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 111/238 (46%), Gaps = 21/238 (8%)
Query: 67 PSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLSSGVT-VAIKKLDKDAFQGF--R 123
P ++ + D ++ + IG+G++G V A T VAIKK+ Q + R
Sbjct: 28 PGEVEMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQR 87
Query: 124 EFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQ 183
R E++ L + RH N++ I + R E + + + Q L +T D K
Sbjct: 88 TLR-EIQILLRFRHENVIGI-----RDILRASTLEAMRDVYIVQDLMET------DLYKL 135
Query: 184 LNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR 243
L S LS + + + GL Y+H ++HRD+K SN+L+++ + I DFGLAR
Sbjct: 136 LKSQ-QLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLINTTCDLKICDFGLAR 192
Query: 244 RIDTSHSHVS--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
D H H T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 193 IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 249
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLF 110
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 111 QLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF+ L +++ D S PL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLF 111
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 112 QLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 166 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 201
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
D K +G G+FG V +A K ++ TVA+K L + A E RA M L L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS--EHRALMSELKIL 86
Query: 136 ----RHRNIVKILGYCAS-GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPL 190
H N+V +LG C G ++I EF + G+L +L + RN+ V + L
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKPEDLYKDFL 145
Query: 191 SWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHS 250
+ E + VA G+ +L + IHRD+ + N+LL I DFGLAR I
Sbjct: 146 TLEHLIXYSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 251 HVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
V A + +M PE + + T+ DV+SFG+L+ EI
Sbjct: 204 XVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEI 243
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKL-SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
DNF IG+GS G V A + SSG VA+KK+D Q E+ + +H N+
Sbjct: 32 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
V++ G + ++ EF+E G+L + T N++ Q+ ++C
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----QIAAVC-----------L 132
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
V L+ LH + +IHRDIKS ++LL D +SDFG ++ + GT
Sbjct: 133 AVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTP 189
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+M PE + +D++S GI++IE+
Sbjct: 190 YWMAPELI-SRLPYGPEVDIWSLGIMVIEM 218
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++EF+ L +++ D S PL ++
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLFQL 113
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 114 LQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 201
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKL-SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
DNF IG+GS G V A + SSG VA+KK+D Q E+ + +H N+
Sbjct: 34 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
V++ G + ++ EF+E G+L + T N++ Q+ ++C
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----QIAAVC-----------L 134
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
V L+ LH + +IHRDIKS ++LL D +SDFG ++ + GT
Sbjct: 135 AVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTP 191
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+M PE + +D++S GI++IE+
Sbjct: 192 YWMAPELI-SRLPYGPEVDIWSLGIMVIEM 220
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF+ S+D +D S PL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDL-------KKFMDASALTGIPLPLIKSYLF 111
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 112 QLLQG----LAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 166 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++EF LH + +D S PL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKTF-MDASALTGIPLPLIKSYLF 113
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 114 QLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 168 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 203
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 41/226 (18%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+F ++IG G FG V+KAK G T IK++ + + RE +A L KL H NIV
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKA----LAKLDHVNIV 67
Query: 142 KILGYCASGLDR-----------------VLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
G C G D + EF + G+L+QW+ + R + +D L
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLAL 125
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR 244
++ + G+ Y+H K +I+RD+K SN+ L + I DFGL
Sbjct: 126 ------------ELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLVTS 171
Query: 245 IDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ ++ GT+ YM PE + +D+Y+ G+++ E+
Sbjct: 172 LKNDGKRXRSK--GTLRYMSPEQISSQDYGK-EVDLYALGLILAEL 214
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 76 ELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGF--REFRAEMETL 132
++ D ++ IG+G++G V A + + V VAIKK+ Q + R R E++ L
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 95
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+ RH NI+ G++ ++ +E D +L D+ +L LS
Sbjct: 96 LRFRHENII--------GINDIIRAPTIEQMK-DVYLVTHLMGADL---YKLLKTQHLSN 143
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ + + GL Y+H ++HRD+K SN+LL++ + I DFGLAR D H H
Sbjct: 144 DHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 201
Query: 253 S--TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + T +D++S G ++ E+ + RP P
Sbjct: 202 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 249
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 37/282 (13%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCAS 149
+G G FG V+ + VAIK L K F E + + KLRH +V++ S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 250
Query: 150 GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYL 209
++ E++ GSL +L ++ +L L V + +A+G+AY+
Sbjct: 251 EEPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQL--------VDMAAQIASGMAYV 297
Query: 210 HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE-YL 268
+ +HRD++++N+L+ + ++DFGL R I+ + + + PE L
Sbjct: 298 ERMN--YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAAL 355
Query: 269 GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMVDS 328
G T+ DV+SFGIL+ E+ T+ R P +++ + + +E M + E +
Sbjct: 356 YGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 413
Query: 329 NISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
+ C C + ERP Y+ L++
Sbjct: 414 -----------------LMCQCWRKDPEERPTFEYLQAFLED 438
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 106/223 (47%), Gaps = 20/223 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
D K +G G+FG V +A K ++ TVA+K L + A E RA M L L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKIL 75
Query: 136 ----RHRNIVKILGYCAS-GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCP- 189
H N+V +LG C G ++I EF + G+L +L + RN+ V L
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKD 134
Query: 190 -LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
L+ E + VA G+ +L + IHRD+ + N+LL I DFGLAR I
Sbjct: 135 FLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+V A + +M PE + + T+ DV+SFG+L+ EI
Sbjct: 193 PDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEI 234
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 106/223 (47%), Gaps = 20/223 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
D K +G G+FG V +A K ++ TVA+K L + A E RA M L L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKIL 84
Query: 136 ----RHRNIVKILGYCAS-GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCP- 189
H N+V +LG C G ++I EF + G+L +L + RN+ V L
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKD 143
Query: 190 -LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
L+ E + VA G+ +L + IHRD+ + N+LL I DFGLAR I
Sbjct: 144 FLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+V A + +M PE + + T+ DV+SFG+L+ EI
Sbjct: 202 PDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEI 243
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKL-SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
DNF IG+GS G V A + SSG VA+KK+D Q E+ + +H N+
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
V++ G + ++ EF+E G+L + T N++ Q+ ++C
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----QIAAVC-----------L 123
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
V L+ LH + +IHRDIKS ++LL D +SDFG ++ + GT
Sbjct: 124 AVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTP 180
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+M PE + +D++S GI++IE+
Sbjct: 181 YWMAPELI-SRLPYGPEVDIWSLGIMVIEM 209
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 106/223 (47%), Gaps = 20/223 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
D K +G G+FG V +A K ++ TVA+K L + A E RA M L L
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKIL 121
Query: 136 ----RHRNIVKILGYCAS-GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCP- 189
H N+V +LG C G ++I EF + G+L +L + RN+ V L
Sbjct: 122 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKD 180
Query: 190 -LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
L+ E + VA G+ +L + IHRD+ + N+LL I DFGLAR I
Sbjct: 181 FLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 238
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+V A + +M PE + + T+ DV+SFG+L+ EI
Sbjct: 239 PDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEI 280
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKK-LDKDAFQGFREFRAEMETLGKLRHRNI 140
+++ K+IG+GSFG VY+AKL SG VAIKK L AF+ E++ + KL H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----RELQIMRKLDHCNI 75
Query: 141 VKI-LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI- 198
V++ + +SG + +Y + + ++ +R+ S+ +L P+ + VK+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH----YSRAKQTL-PVIY---VKLY 127
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQVA 257
+ + LAY+H I HRDIK N+LLD D + DFG A+++ +VS
Sbjct: 128 MYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--I 183
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + G T T +DV+S G ++ E+
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKL-SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
DNF IG+GS G V A + SSG VA+KK+D Q E+ + +H N+
Sbjct: 27 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
V++ G + ++ EF+E G+L + T N++ Q+ ++C
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----QIAAVC-----------L 127
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
V L+ LH + +IHRDIKS ++LL D +SDFG ++ + GT
Sbjct: 128 AVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTP 184
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+M PE + +D++S GI++IE+
Sbjct: 185 YWMAPELI-SRLPYGPEVDIWSLGIMVIEM 213
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++EF+ L +++ D S PL ++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLFQL 112
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G L++ H ++HRD+K N+L++++ ++DFGLAR + +V
Sbjct: 113 LQG----LSFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV- 165
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 106/223 (47%), Gaps = 20/223 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
D K +G G+FG V +A K ++ TVA+K L + A E RA M L L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKIL 75
Query: 136 ----RHRNIVKILGYCAS-GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCP- 189
H N+V +LG C G ++I EF + G+L +L + RN+ V L
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKD 134
Query: 190 -LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
L+ E + VA G+ +L + IHRD+ + N+LL I DFGLAR I
Sbjct: 135 FLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+V A + +M PE + + T+ DV+SFG+L+ EI
Sbjct: 193 PDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEI 234
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 90 IGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLRHRNIVK 142
+G GSFG VY+ K + VA+K +++ A R EF E + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+LG + G +++ E + +G L +L + + + P + + +++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP-----PPTLQEMIQMAAEI 139
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHVSTQVAGTMG 261
A+G+AYL+ K +HR++ + N ++ DF I DFG+ R I +T + + +
Sbjct: 140 ADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+M PE L + T D++SFG+++ EI +
Sbjct: 198 WMAPESL-KDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 90 IGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLRHRNIVK 142
+G GSFG VY+ K + VA+K +++ A R EF E + ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+LG + G +++ E + +G L +L + + + P + + +++ +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP-----PPTLQEMIQMAAEI 140
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHVSTQVAGTMG 261
A+G+AYL+ K +HR++ + N ++ DF I DFG+ R I +T + + +
Sbjct: 141 ADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+M PE L + T D++SFG+++ EI +
Sbjct: 199 WMAPESL-KDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 90 IGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFR---EFRAEMETLGKLRHRNIVKILG 145
+G G+FG V K +G VA+K L++ + + R E++ L RH +I+K+
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 146 YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANG 205
++ D ++ E+V G L ++ R D+ E+R ++ + + +G
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEK--------------ESR-RLFQQILSG 128
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPP 265
+ Y H ++HRD+K NVLLD+ A I+DFGL+ + S G+ Y P
Sbjct: 129 VDYCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRXSCGSPNYAAP 184
Query: 266 EYLGGNTAATVMLDVYSFGILM 287
E + G A +D++S G+++
Sbjct: 185 EVISGRLYAGPEVDIWSSGVIL 206
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLR 136
+ +NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIVK+L + L++E V D +D S PL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV----------DQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++++G LA+ H ++HRD+K N+L++++ ++DFGLAR +V
Sbjct: 114 QLLQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 168 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 203
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 24/233 (10%)
Query: 72 ISMSELIDATDNFSTDKIIGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFR-EFRAEM 129
+++ EL D D+F +G G+ G V+K + SG+ +A K + + R + E+
Sbjct: 1 MALGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIREL 58
Query: 130 ETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCP 189
+ L + IV G S + + E ++ GSLDQ L R
Sbjct: 59 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--------------- 103
Query: 190 LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSH 249
+ + K+ V GL YL K I+HRD+K SN+L++S E + DFG++ ++
Sbjct: 104 IPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--- 159
Query: 250 SHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVL 302
++ + GT YM PE L G T +V D++S G+ ++E+A P P+ +
Sbjct: 160 DEMANEFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPRPPMAI 211
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
D K +G G+FG V +A K ++ TVA+K L + A E RA M L L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKIL 75
Query: 136 ----RHRNIVKILGYCAS-GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCP- 189
H N+V +LG C G ++I EF + G+L +L + RN+ V L
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKD 134
Query: 190 -LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
L+ E + VA G+ +L + IHRD+ + N+LL I DFGLAR I
Sbjct: 135 FLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
V A + +M PE + + T+ DV+SFG+L+ EI
Sbjct: 193 PDXVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEI 234
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
D K +G G+FG V +A K ++ TVA+K L + A E RA M L L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKIL 84
Query: 136 ----RHRNIVKILGYCAS-GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCP- 189
H N+V +LG C G ++I EF + G+L +L + RN+ V L
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKD 143
Query: 190 -LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
L+ E + VA G+ +L + IHRD+ + N+LL I DFGLAR I
Sbjct: 144 FLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
V A + +M PE + + T+ DV+SFG+L+ EI
Sbjct: 202 PDXVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEI 243
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 32/251 (12%)
Query: 59 LFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS----SGVTVAIKKL 114
+ DS L + + +++ F+ +++G G FG V +A+L S V VA+K L
Sbjct: 1 MLDSLGISDELKE-KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML 59
Query: 115 DKD--AFQGFREFRAEMETLGKLRHRNIVKILGYCASGLDR------VLIYEFVENGSLD 166
D A EF E + + H ++ K++G + ++I F+++G L
Sbjct: 60 KADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLH 119
Query: 167 QWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV 226
+L SR G N L +T V+ + +A G+ YL + IHRD+ + N
Sbjct: 120 AFLL-ASRI----GENPFN----LPLQTLVRFMVDIACGMEYLSS--RNFIHRDLAARNC 168
Query: 227 LLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAA----TVMLDVYS 282
+L D ++DFGL+R+I + + G +P ++L + A TV DV++
Sbjct: 169 MLAEDMTVCVADFGLSRKIYSGDYYRQ----GCASKLPVKWLALESLADNLYTVHSDVWA 224
Query: 283 FGILMIEIATQ 293
FG+ M EI T+
Sbjct: 225 FGVTMWEIMTR 235
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 129/295 (43%), Gaps = 34/295 (11%)
Query: 83 NFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKL---DKDAFQGFREFRAEMETLGKLRHR 138
NF +K IG G F VY+A L GV VA+KK+ D + + E++ L +L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N++K + ++ E + G L + + + + + + W+ V++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV-------WKYFVQL 145
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
+ L ++H + ++HRDIK +NV + + + D GL R +S + + + G
Sbjct: 146 ----CSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVG 198
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEA 318
T YM PE + N D++S G L+ E+A P G ++ L + +E
Sbjct: 199 TPYYMSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSP-----FYGDKMNLYSLCKKIE- 251
Query: 319 RNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDELVA 373
+ + S+ EEL + + MC N +RP ++YV + + A
Sbjct: 252 -QCDYPPLPSDHYSEELRQ--------LVNMCINPDPEKRPDVTYVYDVAKRMHA 297
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKL-SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
DNF IG+GS G V A + SSG VA+KK+D Q E+ + +H N+
Sbjct: 154 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
V++ G + ++ EF+E G+L + T N++ Q+ ++C
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----QIAAVC-----------L 254
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
V L+ LH + +IHRDIKS ++LL D +SDFG ++ + + GT
Sbjct: 255 AVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXLVGTP 311
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+M PE + +D++S GI++IE+
Sbjct: 312 YWMAPELI-SRLPYGPEVDIWSLGIMVIEM 340
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
D K +G G+FG V +A K ++ TVA+K L + A E RA M L L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKIL 75
Query: 136 ----RHRNIVKILGYCAS-GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCP- 189
H N+V +LG C G ++I EF + G+L +L + RN+ V L
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKD 134
Query: 190 -LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
L+ E + VA G+ +L + IHRD+ + N+LL I DFGLAR I
Sbjct: 135 FLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
V A + +M PE + + T+ DV+SFG+L+ EI
Sbjct: 193 PDXVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEI 234
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKL-SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
DNF IG+GS G V A + SSG VA+KK+D Q E+ + +H N+
Sbjct: 77 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
V++ G + ++ EF+E G+L + T N++ Q+ ++C
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-----QIAAVC-----------L 177
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
V L+ LH + +IHRDIKS ++LL D +SDFG ++ + GT
Sbjct: 178 AVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTP 234
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+M PE + +D++S GI++IE+
Sbjct: 235 YWMAPELI-SRLPYGPEVDIWSLGIMVIEM 263
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 32/265 (12%)
Query: 52 SDLSSIAL-----FDSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL-- 103
SD+SS L D ++ +P L Q +I + +++IG G FG VY L
Sbjct: 12 SDISSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLD 71
Query: 104 --SSGVTVAIKKLDKDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEF 159
+ A+K L++ G +F E + H N++ +LG C S +++ +
Sbjct: 72 NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 131
Query: 160 VENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHR 219
+++G L ++ + + N V + + VA G+ YL K +HR
Sbjct: 132 MKHGDLRNFIRNETHNPTV--------------KDLIGFGLQVAKGMKYL--ASKKFVHR 175
Query: 220 DIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHVSTQVAGTM--GYMPPEYLGGNTAATV 276
D+ + N +LD F ++DFGLAR + D + V + + +M E L T
Sbjct: 176 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTT 234
Query: 277 MLDVYSFGILMIEIATQIRPNLPVV 301
DV+SFG+L+ E+ T+ P P V
Sbjct: 235 KSDVWSFGVLLWELMTRGAPPYPDV 259
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+ K+ D A E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++EF+ L +++ D S PL ++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLFQL 112
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G LA+ H ++HRD+K N+L++++ ++DFGLAR + +V
Sbjct: 113 LQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV- 165
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+ K+ D A E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++EF+ L +++ D S PL ++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---------DASALTGIPLPLIKSYLFQL 111
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G LA+ H ++HRD+K N+L++++ ++DFGLAR + +V
Sbjct: 112 LQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV- 164
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 199
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 104/226 (46%), Gaps = 44/226 (19%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKL-DKDAFQGFREFRAEMETLGKLRHRNIVKILGY 146
K IG G +G V+ K G VA+K + FRE L +RH NI LG+
Sbjct: 43 KQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVL--MRHENI---LGF 96
Query: 147 CASGLDRV-------LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
A+ + LI ++ ENGSL +L T+ L ++ +K+
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT----------------LDAKSMLKLA 140
Query: 200 RGVANGLAYLHG-----LEKPII-HRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSH 251
+GL +LH KP I HRD+KS N+L+ + I+D GLA + DT+
Sbjct: 141 YSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVD 200
Query: 252 VSTQV-AGTMGYMPPEYLG-----GNTAATVMLDVYSFGILMIEIA 291
+ GT YMPPE L + + +M D+YSFG+++ E+A
Sbjct: 201 IPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
D K +G G+FG V +A K ++ TVA+K L + A E RA M L L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKIL 84
Query: 136 ----RHRNIVKILGYCAS-GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCP- 189
H N+V +LG C G ++I EF + G+L +L + RN+ V L
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVPYKVAPEDLYKD 143
Query: 190 -LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
L+ E + VA G+ +L + IHRD+ + N+LL I DFGLAR I
Sbjct: 144 FLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
V A + +M PE + + T+ DV+SFG+L+ EI
Sbjct: 202 PDXVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEI 243
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 31/215 (14%)
Query: 88 KIIGDGSFGFVYKAKL-----SSGVTVAIKKLDKD-AFQGFREFRAEMETLGKLRHRNIV 141
K++G G+FG VYK + + VAIK L++ + EF E + + H ++V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
++LG C S + L+ + + +G L +++H+ + D GS+ L L+W ++
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHE---HKDNIGSQLL-----LNWCVQI----- 149
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
A G+ YL E+ ++HRD+ + NVL+ S I+DFGLAR ++ + G
Sbjct: 150 -AKGMMYLE--ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD----GG 202
Query: 262 YMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
MP +++ T DV+S+G+ + E+ T
Sbjct: 203 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA--EMETLGKLRHR 138
+NF + IG+G++G VYKA+ +G VA+KK+ D A E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+L + L++E V +D S PL ++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ----------DLKTFMDASALTGIPLPLIKSYLFQL 111
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
++G LA+ H ++HRD+K N+L++++ ++DFGLAR + +V
Sbjct: 112 LQG----LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV- 164
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T+ Y PE L G + +D++S G + E+ T+
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 199
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 54/239 (22%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+F ++IG G FG V+KAK G T I+++ + + RE +A L KL H NIV
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKA----LAKLDHVNIV 68
Query: 142 KILGYCASGLDR------------------------------VLIYEFVENGSLDQWLHD 171
G C G D + EF + G+L+QW+ +
Sbjct: 69 HYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-E 126
Query: 172 TSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSD 231
R + +D L ++ + G+ Y+H K +IHRD+K SN+ L
Sbjct: 127 KRRGEKLDKVLAL------------ELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVDT 172
Query: 232 FEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ I DFGL + T+ GT+ YM PE + +D+Y+ G+++ E+
Sbjct: 173 KQVKIGDFGLVTSLKNDGKR--TRSKGTLRYMSPEQISSQDYGK-EVDLYALGLILAEL 228
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
IG+GS G V A + +G VA+KK+D Q E+ + H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAY 208
G + ++ EF+E G+L + T N++ Q+ ++C LS V L+Y
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEE-----QIATVC-LS----------VLRALSY 156
Query: 209 LHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYL 268
LH + +IHRDIKS ++LL SD +SDFG ++ + + GT +M PE +
Sbjct: 157 LHN--QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV-SKEVPKRKXLVGTPYWMAPEVI 213
Query: 269 GGNTAATVMLDVYSFGILMIEI 290
T +D++S GI++IE+
Sbjct: 214 SRLPYGT-EVDIWSLGIMVIEM 234
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 26/239 (10%)
Query: 74 MSELIDATDNFSTDKIIGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFR-EFRAEMET 131
+ EL D D+F +G G+ G V+K + SG+ +A K + + R + E++
Sbjct: 62 VGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 119
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
L + IV G S + + E ++ GSLDQ L R +
Sbjct: 120 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---------------IP 164
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSH 251
+ K+ V GL YL K I+HRD+K SN+L++S E + DFG++ ++ S
Sbjct: 165 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 220
Query: 252 VSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLL 310
++ GT YM PE L G T +V D++S G+ ++E+A P P D +E+ L+
Sbjct: 221 MANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPP--DAKELELM 276
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 110/234 (47%), Gaps = 52/234 (22%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G V++ G VA+K +D FRE E+ LRH NI LG+ A
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENI---LGFIA 69
Query: 149 SGLDR-------VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
S + LI + E GSL +L QL +L +S ++IV
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL-------------QLTTLDTVS---CLRIVLS 113
Query: 202 VANGLAYLH----GLE-KPII-HRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
+A+GLA+LH G + KP I HRD+KS N+L+ + + I+D GLA HS + Q
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA----VMHSQSTNQ 169
Query: 256 V-------AGTMGYMPPEYLGGNTAATVM-----LDVYSFGILMIEIATQIRPN 297
+ GT YM PE L +D+++FG+++ E+A ++ N
Sbjct: 170 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSN 223
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 110/234 (47%), Gaps = 52/234 (22%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G G +G V++ G VA+K +D FRE E+ LRH NI LG+ A
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENI---LGFIA 69
Query: 149 SGLDR-------VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
S + LI + E GSL +L QL +L +S ++IV
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL-------------QLTTLDTVS---CLRIVLS 113
Query: 202 VANGLAYLH----GLE-KPII-HRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
+A+GLA+LH G + KP I HRD+KS N+L+ + + I+D GLA HS + Q
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA----VMHSQSTNQ 169
Query: 256 V-------AGTMGYMPPEYLGGNTAATVM-----LDVYSFGILMIEIATQIRPN 297
+ GT YM PE L +D+++FG+++ E+A ++ N
Sbjct: 170 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSN 223
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 82 DNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKL 135
D + K +G G+FG V +A K ++ TVA+K L + A E RA M L L
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKIL 85
Query: 136 ----RHRNIVKILGYCAS-GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCP- 189
H N+V +LG C G ++I EF + G+L +L S+ ++ K L
Sbjct: 86 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR--SKRNEFVPYKTPEDLYKD 143
Query: 190 -LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
L+ E + VA G+ +L + IHRD+ + N+LL I DFGLAR I
Sbjct: 144 FLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 249 HSHVSTQVAG-TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
V A + +M PE + + T+ DV+SFG+L+ EI
Sbjct: 202 PDXVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEI 243
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 27/251 (10%)
Query: 61 DSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTVAIKKLD 115
D ++ +P L Q +I + +++IG G FG VY L + A+K L+
Sbjct: 7 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 66
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQWLHDTS 173
+ G +F E + H N++ +LG C S +++ ++++G L ++ + +
Sbjct: 67 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 126
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
N V + + VA G+ YL K +HRD+ + N +LD F
Sbjct: 127 HNPTV--------------KDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFT 170
Query: 234 AHISDFGLARRI---DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
++DFGLAR + + H T + +M E L T DV+SFG+L+ E+
Sbjct: 171 VKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWEL 229
Query: 291 ATQIRPNLPVV 301
T+ P P V
Sbjct: 230 MTRGAPPYPDV 240
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 27/258 (10%)
Query: 54 LSSIALFDSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVT 108
L + D ++ +P L Q +I + +++IG G FG VY L +
Sbjct: 20 LQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIH 79
Query: 109 VAIKKLDKDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLD 166
A+K L++ G +F E + H N++ +LG C S +++ ++++G L
Sbjct: 80 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 139
Query: 167 QWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV 226
++ + + N V + + VA G+ YL K +HRD+ + N
Sbjct: 140 NFIRNETHNPTV--------------KDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNC 183
Query: 227 LLDSDFEAHISDFGLARRI-DTSHSHVSTQVAGTM--GYMPPEYLGGNTAATVMLDVYSF 283
+LD F ++DFGLAR + D + V + + +M E L T DV+SF
Sbjct: 184 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSF 242
Query: 284 GILMIEIATQIRPNLPVV 301
G+L+ E+ T+ P P V
Sbjct: 243 GVLLWELMTRGAPPYPDV 260
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 61 DSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTVAIKKLD 115
D ++ +P L Q +I + +++IG G FG VY L + A+K L+
Sbjct: 8 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 67
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQWLHDTS 173
+ G +F E + H N++ +LG C S +++ ++++G L ++ + +
Sbjct: 68 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 127
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
N V + + VA G+ YL K +HRD+ + N +LD F
Sbjct: 128 HNPTV--------------KDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFT 171
Query: 234 AHISDFGLARRI-DTSHSHVSTQVAGTM--GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
++DFGLAR + D + V + + +M E L T DV+SFG+L+ E+
Sbjct: 172 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWEL 230
Query: 291 ATQIRPNLPVV 301
T+ P P V
Sbjct: 231 MTRGAPPYPDV 241
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 31/215 (14%)
Query: 88 KIIGDGSFGFVYKAKL-----SSGVTVAIKKLDKD-AFQGFREFRAEMETLGKLRHRNIV 141
K++G G+FG VYK + + VAIK L++ + EF E + + H ++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
++LG C S + L+ + + +G L +++H+ N GS+ L L+W ++
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNI---GSQLL-----LNWCVQI----- 126
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
A G+ YL E+ ++HRD+ + NVL+ S I+DFGLAR ++ + G
Sbjct: 127 -AKGMMYLE--ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD----GG 179
Query: 262 YMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
MP +++ T DV+S+G+ + E+ T
Sbjct: 180 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQ-GFREFRAEMETLGKLRHRN 139
D F + +G G+FG V+ + SSG+ IK ++KD Q + AE+E L L H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 140 IVKILGYCASGLDRVLIYEFVENGS-LDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
I+KI + ++ E E G L++ + +R LS ++
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGK------------ALSEGYVAEL 129
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAH----ISDFGLARRIDTSHSHVST 254
++ + N LAY H + ++H+D+K N+L D H I DFGLA + ST
Sbjct: 130 MKQMMNALAYFHS--QHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEH--ST 184
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
AGT YM PE + T D++S G++M + T P
Sbjct: 185 NAAGTALYMAPEVFKRDV--TFKCDIWSAGVVMYFLLTGCLP 224
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 82 DNFSTDKIIGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLRHRN 139
D+F +G G+ G V+K + SG+ +A K + + R + E++ L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IV G S + + E ++ GSLDQ L R + + K+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---------------IPEQILGKVS 110
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
V GL YL K I+HRD+K SN+L++S E + DFG++ ++ S ++ GT
Sbjct: 111 IAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGT 166
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLL 310
YM PE L G T +V D++S G+ ++E+A P P D +E+ L+
Sbjct: 167 RSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPP--DAKELELM 214
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 61 DSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTVAIKKLD 115
D ++ +P L Q +I + +++IG G FG VY L + A+K L+
Sbjct: 8 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 67
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQWLHDTS 173
+ G +F E + H N++ +LG C S +++ ++++G L ++ + +
Sbjct: 68 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 127
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
N V + + VA G+ YL K +HRD+ + N +LD F
Sbjct: 128 HNPTV--------------KDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFT 171
Query: 234 AHISDFGLARRI-DTSHSHVSTQVAGTM--GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
++DFGLAR + D + V + + +M E L T DV+SFG+L+ E+
Sbjct: 172 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWEL 230
Query: 291 ATQIRPNLPVV 301
T+ P P V
Sbjct: 231 MTRGAPPYPDV 241
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 61 DSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTVAIKKLD 115
D ++ +P L Q +I + +++IG G FG VY L + A+K L+
Sbjct: 5 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 64
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQWLHDTS 173
+ G +F E + H N++ +LG C S +++ ++++G L ++ + +
Sbjct: 65 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 124
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
N V + + VA G+ YL K +HRD+ + N +LD F
Sbjct: 125 HNPTV--------------KDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFT 168
Query: 234 AHISDFGLARRI-DTSHSHVSTQVAGTM--GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
++DFGLAR + D + V + + +M E L T DV+SFG+L+ E+
Sbjct: 169 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWEL 227
Query: 291 ATQIRPNLPVV 301
T+ P P V
Sbjct: 228 MTRGAPPYPDV 238
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 61 DSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTVAIKKLD 115
D ++ +P L Q +I + +++IG G FG VY L + A+K L+
Sbjct: 7 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 66
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQWLHDTS 173
+ G +F E + H N++ +LG C S +++ ++++G L ++ + +
Sbjct: 67 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 126
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
N V + + VA G+ YL K +HRD+ + N +LD F
Sbjct: 127 HNPTV--------------KDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFT 170
Query: 234 AHISDFGLARRI-DTSHSHVSTQVAGTM--GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
++DFGLAR + D + V + + +M E L T DV+SFG+L+ E+
Sbjct: 171 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWEL 229
Query: 291 ATQIRPNLPVV 301
T+ P P V
Sbjct: 230 MTRGAPPYPDV 240
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 61 DSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTVAIKKLD 115
D ++ +P L Q +I + +++IG G FG VY L + A+K L+
Sbjct: 6 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 65
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQWLHDTS 173
+ G +F E + H N++ +LG C S +++ ++++G L ++ + +
Sbjct: 66 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 125
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
N V + + VA G+ YL K +HRD+ + N +LD F
Sbjct: 126 HNPTV--------------KDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFT 169
Query: 234 AHISDFGLARRI-DTSHSHVSTQVAGTM--GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
++DFGLAR + D + V + + +M E L T DV+SFG+L+ E+
Sbjct: 170 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWEL 228
Query: 291 ATQIRPNLPVV 301
T+ P P V
Sbjct: 229 MTRGAPPYPDV 239
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 61 DSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTVAIKKLD 115
D ++ +P L Q +I + +++IG G FG VY L + A+K L+
Sbjct: 3 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 62
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQWLHDTS 173
+ G +F E + H N++ +LG C S +++ ++++G L ++ + +
Sbjct: 63 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 122
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
N V + + VA G+ YL K +HRD+ + N +LD F
Sbjct: 123 HNPTV--------------KDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFT 166
Query: 234 AHISDFGLARRI-DTSHSHVSTQVAGTM--GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
++DFGLAR + D + V + + +M E L T DV+SFG+L+ E+
Sbjct: 167 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWEL 225
Query: 291 ATQIRPNLPVV 301
T+ P P V
Sbjct: 226 MTRGAPPYPDV 236
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAI-------KKLDKDAFQGFREFRAEMETLGKLRHRNIVK 142
IG GSF VYK L + TV + +KL K Q F+E E E L L+H NIV+
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQHPNIVR 89
Query: 143 ILGYCASGLDR----VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
S + VL+ E +G+L +L + V K L S C
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYL----KRFKVXKIKVLRSWC---------- 135
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDF-EAHISDFGLARRIDTSHSHVSTQVA 257
R + GL +LH PIIHRD+K N+ + I D GLA + + V
Sbjct: 136 -RQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKAVI 191
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
GT + PE +V DVY+FG +E AT P
Sbjct: 192 GTPEFXAPEXYEEKYDESV--DVYAFGXCXLEXATSEYP 228
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 111/236 (47%), Gaps = 52/236 (22%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHRNIVKILGY 146
+ +G G +G V++ G VA+K +D FRE E+ LRH NI LG+
Sbjct: 43 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENI---LGF 96
Query: 147 CASGLDR-------VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
AS + LI + E GSL +L QL +L +S ++IV
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYL-------------QLTTLDTVS---CLRIV 140
Query: 200 RGVANGLAYLH----GLE-KPII-HRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS 253
+A+GLA+LH G + KP I HRD+KS N+L+ + + I+D GLA HS +
Sbjct: 141 LSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA----VMHSQST 196
Query: 254 TQV-------AGTMGYMPPEYLGGNTAATVM-----LDVYSFGILMIEIATQIRPN 297
Q+ GT YM PE L +D+++FG+++ E+A ++ N
Sbjct: 197 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSN 252
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 82 DNFSTDKIIGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLRHRN 139
D+F +G G+ G V+K + SG+ +A K + + R + E++ L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IV G S + + E ++ GSLDQ L R + + K+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---------------IPEQILGKVS 110
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
V GL YL K I+HRD+K SN+L++S E + DFG++ ++ S ++ GT
Sbjct: 111 IAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGT 166
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLL 310
YM PE L G T +V D++S G+ ++E+A P P D +E+ L+
Sbjct: 167 RSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPP--DAKELELM 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 82 DNFSTDKIIGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLRHRN 139
D+F +G G+ G V+K + SG+ +A K + + R + E++ L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IV G S + + E ++ GSLDQ L R + + K+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---------------IPEQILGKVS 110
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
V GL YL K I+HRD+K SN+L++S E + DFG++ ++ S ++ GT
Sbjct: 111 IAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGT 166
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLL 310
YM PE L G T +V D++S G+ ++E+A P P D +E+ L+
Sbjct: 167 RSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPP--DAKELELM 214
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 29/214 (13%)
Query: 90 IGDGSFG----FVY-KAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVKI 143
+G+G FG + Y +G VA+K L DA R ++ E++ L L H +I+K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 144 LGYC--ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
G C A L+ E+V GSL +L S G QL + +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSI-----GLAQL-----------LLFAQQ 142
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG--T 259
+ G+AYLH + IHRD+ + NVLLD+D I DFGLA+ + H + G
Sbjct: 143 ICEGMAYLHA--QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP 200
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
+ + PE L DV+SFG+ + E+ T
Sbjct: 201 VFWYAPECL-KEYKFYYASDVWSFGVTLYELLTH 233
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 82 DNFSTDKIIGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLRHRN 139
D+F +G G+ G V+K + SG+ +A K + + R + E++ L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IV G S + + E ++ GSLDQ L R + + K+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---------------IPEQILGKVS 110
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
V GL YL K I+HRD+K SN+L++S E + DFG++ ++ S ++ GT
Sbjct: 111 IAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGT 166
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLL 310
YM PE L G T +V D++S G+ ++E+A P P D +E+ L+
Sbjct: 167 RSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPP--DAKELELM 214
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRH 137
D ++ + IG G+ G VY A +++G VAI++++ E+ + + ++
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 76
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NIV L G + ++ E++ GSL + +T ++ Q+ ++C
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG-----QIAAVC--------- 122
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
R L +LH + +IHRDIKS N+LL D ++DFG +I S ST V
Sbjct: 123 --RECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV- 177
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT +M PE + A +D++S GI+ IE+
Sbjct: 178 GTPYWMAPEVV-TRKAYGPKVDIWSLGIMAIEM 209
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 26/239 (10%)
Query: 74 MSELIDATDNFSTDKIIGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFR-EFRAEMET 131
+ EL D D+F +G G+ G V+K + SG+ +A K + + R + E++
Sbjct: 27 VGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 84
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
L + IV G S + + E ++ GSLDQ L R +
Sbjct: 85 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---------------IP 129
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSH 251
+ K+ V GL YL K I+HRD+K SN+L++S E + DFG++ ++ S
Sbjct: 130 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 185
Query: 252 VSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLL 310
++ GT YM PE L G T +V D++S G+ ++E+A P P D +E+ L+
Sbjct: 186 MANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPP--DAKELELM 241
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 27/228 (11%)
Query: 83 NFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQ--GFREFRAEMETLGKLRHRN 139
N+ K IG G+F V A+ + +G VAIK +DK ++ E+ + L H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IVK+ + LI E+ G + +L R + E R K
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK--------------EARSKF- 117
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
R + + + Y H +K I+HRD+K+ N+LLD+D I+DFG + T + T G+
Sbjct: 118 RQIVSAVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF-TVGGKLDT-FCGS 173
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
Y PE G +DV+S G+++ T + +LP DGQ +
Sbjct: 174 PPYAAPELFQGKKYDGPEVDVWSLGVILY---TLVSGSLP--FDGQNL 216
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
D F +++ G G+FG V K S+G++VAIKK+ +D RE + M+ L L H NI
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNI 81
Query: 141 VKILGYCAS--GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
V++ Y + DR IY V + LH RN + P +V +
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRN------YYRRQVAPPPILIKVFL 135
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLL-DSDFEAHISDFGLARRIDTSHSHVSTQVA 257
+ + + LH + HRDIK NVL+ ++D + DFG A+++ S +V+
Sbjct: 136 FQ-LIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA--YI 192
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ Y PE + GN T +D++S G + E+
Sbjct: 193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEM 225
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 27/228 (11%)
Query: 83 NFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQ--GFREFRAEMETLGKLRHRN 139
N+ K IG G+F V A+ + +G VA+K +DK ++ E+ + L H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IVK+ + L+ E+ G + +L R + E R K
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK--------------EARAKF- 120
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
R + + + Y H +K I+HRD+K+ N+LLD D I+DFG + T + + T G+
Sbjct: 121 RQIVSAVQYCH--QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF-TVGNKLDT-FCGS 176
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
Y PE G +DV+S G+++ T + +LP DGQ +
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILY---TLVSGSLP--FDGQNL 219
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 84 FSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAF-QGFREFRAEMETLGKLRHRNIV 141
+ + IG G F V A + +G VAIK +DK+ + E+E L LRH++I
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
++ + ++ E+ G L ++ R + ETRV + R
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE--------------ETRV-VFRQ 116
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ + +AY+H + HRD+K N+L D + + DFGL + + + G++
Sbjct: 117 IVSAVAYVHS--QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA 174
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
Y PE + G + DV+S GIL+ + P
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 24/228 (10%)
Query: 74 MSELIDATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR-EFRAEMET 131
+ EL D D+F +G G+ G V K + SG+ +A K + + R + E++
Sbjct: 10 VGELKD--DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQV 67
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
L + IV G S + + E ++ GSLDQ L + R +
Sbjct: 68 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR---------------IP 112
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSH 251
E K+ V GLAYL + I+HRD+K SN+L++S E + DFG++ ++ S
Sbjct: 113 EEILGKVSIAVLRGLAYLREKHQ-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 168
Query: 252 VSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
++ GT YM PE L G T +V D++S G+ ++E+A P P
Sbjct: 169 MANSFVGTRSYMAPERLQG-THYSVQSDIWSMGLSLVELAVGRYPIPP 215
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
+ IG G FG V G VA+K + DA + F AE + +LRH N+V++LG
Sbjct: 18 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 148 A---SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
GL ++ E++ GSL +L SR V G L +K V
Sbjct: 75 VEEKGGL--YIVTEYMAKGSLVDYLR--SRGRSVLGGDCL-----------LKFSLDVCE 119
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM--GY 262
+ YL G +HRD+ + NVL+ D A +SDFGL + STQ G + +
Sbjct: 120 AMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKLPVKW 171
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEIATQIR---PNLPV 300
PE L A + DV+SFGIL+ EI + R P +P+
Sbjct: 172 TAPEAL-REAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 211
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 82 DNFSTDKIIGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLRHRN 139
D+F +G G+ G V+K + SG+ +A K + + R + E++ L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IV G S + + E ++ GSLDQ L R + + K+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---------------IPEQILGKVS 110
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
V GL YL K I+HRD+K SN+L++S E + DFG++ ++ S ++ GT
Sbjct: 111 IAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGT 166
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
YM PE L G T +V D++S G+ ++E+A P P
Sbjct: 167 RSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 27/228 (11%)
Query: 83 NFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG--FREFRAEMETLGKLRHRN 139
N+ K IG G+F V A+ + +G VA+K +DK ++ E+ + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IVK+ + L+ E+ G + +L R + E R K
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK--------------EARAKF- 119
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
R + + + Y H +K I+HRD+K+ N+LLD+D I+DFG + T + + T G+
Sbjct: 120 RQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDT-FCGS 175
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
Y PE G +DV+S G+++ T + +LP DGQ +
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILY---TLVSGSLP--FDGQNL 218
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 86 TDKIIGDGSFGFVYKAKL----SSGVTVAIKKLDK-DAFQGFREFRAEMETLGKLRHRNI 140
+D++IG G FG VY + + + AIK L + Q F E + L H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 141 VKILGYC--ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
+ ++G GL VL+ ++ +G L Q++ RN V K L S
Sbjct: 85 LALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTV---KDLISFG---------- 130
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
VA G+ YL E+ +HRD+ + N +LD F ++DFGLAR I + S Q
Sbjct: 131 -LQVARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQ-QH 185
Query: 259 TMGYMPPEYLGGNTAATVML----DVYSFGILMIEIATQIRP 296
+P ++ + T DV+SFG+L+ E+ T+ P
Sbjct: 186 RHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 30/237 (12%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLD---KDAFQG 121
DP ++++ + D FS + IG GSFG VY A+ + + VAIKK+ K + +
Sbjct: 1 DPDVAELFFKD--DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEK 58
Query: 122 FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGS 181
+++ E+ L KLRH N ++ G L+ E+ S +D ++
Sbjct: 59 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG----------SASDLLEVH 108
Query: 182 KQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGL 241
K+ PL + G GLAYLH +IHRD+K+ N+LL + DFG
Sbjct: 109 KK-----PLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGS 161
Query: 242 ARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATV--MLDVYSFGILMIEIATQIRP 296
A + ++ V GT +M PE + +DV+S GI IE+A + P
Sbjct: 162 ASIMAPANXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 27/228 (11%)
Query: 83 NFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG--FREFRAEMETLGKLRHRN 139
N+ K IG G+F V A+ + +G VA+K +DK ++ E+ + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IVK+ + L+ E+ G + +L R + E R K
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK--------------EARAKF- 119
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
R + + + Y H +K I+HRD+K+ N+LLD+D I+DFG + T + + T G+
Sbjct: 120 RQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDT-FCGS 175
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
Y PE G +DV+S G+++ T + +LP DGQ +
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILY---TLVSGSLP--FDGQNL 218
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAF-QGFREFRAEMETLGKLRHRNIVKI 143
+G+G FG V + ++G VA+K L ++ + + E+E L L H NIVK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 144 LGYCAS--GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
G C G LI EF+ +GSL ++L +N + KQ ++K
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQ-----------QLKYAVQ 134
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSH--VSTQVAGT 259
+ G+ YL + +HRD+ + NVL++S+ + I DFGL + I+T V
Sbjct: 135 ICKGMDYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 192
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + PE L + + DV+SFG+ + E+ T
Sbjct: 193 VFWYAPECL-MQSKFYIASDVWSFGVTLHELLT 224
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 26/224 (11%)
Query: 87 DKIIGDGSFGFVYKAKL----SSGVTVAIKKLDKDAFQG-FREFRAEMETLGKLRHRNIV 141
+++IG G FG VY L + A+K L++ G +F E + H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 142 KILGYCA-SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
+LG C S +++ ++++G L ++ + + N V + +
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--------------KDLIGFGL 132
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI-DTSHSHVSTQVAGT 259
VA G+ YL K +HRD+ + N +LD F ++DFGLAR + D + V +
Sbjct: 133 QVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 190
Query: 260 M--GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVV 301
+ +M E L T DV+SFG+L+ E+ T+ P P V
Sbjct: 191 LPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 233
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAF-QGFREFRAEMETLGKLRHRNIVKI 143
+G+G FG V + ++G VA+K L ++ + + E+E L L H NIVK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 144 LGYCA--SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
G C G LI EF+ +GSL ++L +N + KQ ++K
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQ-----------QLKYAVQ 122
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSH--VSTQVAGT 259
+ G+ YL + +HRD+ + NVL++S+ + I DFGL + I+T V
Sbjct: 123 ICKGMDYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 180
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ + PE L + + DV+SFG+ + E+ T
Sbjct: 181 VFWYAPECL-MQSKFYIASDVWSFGVTLHELLT 212
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 30/237 (12%)
Query: 66 DPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLD---KDAFQG 121
DP ++++ + D FS + IG GSFG VY A+ + + VAIKK+ K + +
Sbjct: 40 DPDVAELFFKD--DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEK 97
Query: 122 FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGS 181
+++ E+ L KLRH N ++ G L+ E+ S +D ++
Sbjct: 98 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG----------SASDLLEVH 147
Query: 182 KQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGL 241
K+ PL + G GLAYLH +IHRD+K+ N+LL + DFG
Sbjct: 148 KK-----PLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGS 200
Query: 242 ARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATV--MLDVYSFGILMIEIATQIRP 296
A + ++ V GT +M PE + +DV+S GI IE+A + P
Sbjct: 201 ASIMAPANXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 31/259 (11%)
Query: 55 SSIALFDSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTV 109
S+ D ++ +P L Q +I + +++IG G FG VY L +
Sbjct: 7 SNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHC 66
Query: 110 AIKKLDKDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQ 167
A+K L++ G +F E + H N++ +LG C S +++ ++++G L
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
Query: 168 WLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVL 227
++ + + N V + + VA G+ +L K +HRD+ + N +
Sbjct: 127 FIRNETHNPTV--------------KDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCM 170
Query: 228 LDSDFEAHISDFGLAR-----RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYS 282
LD F ++DFGLAR D+ H+ ++ + +M E L T DV+S
Sbjct: 171 LDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VKWMALESL-QTQKFTTKSDVWS 227
Query: 283 FGILMIEIATQIRPNLPVV 301
FG+L+ E+ T+ P P V
Sbjct: 228 FGVLLWELMTRGAPPYPDV 246
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 31/253 (12%)
Query: 61 DSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTVAIKKLD 115
D ++ +P L Q +I + +++IG G FG VY L + A+K L+
Sbjct: 67 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 126
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQWLHDTS 173
+ G +F E + H N++ +LG C S +++ ++++G L ++ + +
Sbjct: 127 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 186
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
N V + + VA G+ +L K +HRD+ + N +LD F
Sbjct: 187 HNPTV--------------KDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFT 230
Query: 234 AHISDFGLAR-----RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMI 288
++DFGLAR D+ H+ ++ + +M E L T DV+SFG+L+
Sbjct: 231 VKVADFGLARDMYDKEFDSVHNKTGAKLP--VKWMALESL-QTQKFTTKSDVWSFGVLLW 287
Query: 289 EIATQIRPNLPVV 301
E+ T+ P P V
Sbjct: 288 ELMTRGAPPYPDV 300
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 31/253 (12%)
Query: 61 DSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTVAIKKLD 115
D ++ +P L Q +I + +++IG G FG VY L + A+K L+
Sbjct: 6 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 65
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQWLHDTS 173
+ G +F E + H N++ +LG C S +++ ++++G L ++ + +
Sbjct: 66 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 125
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
N V + + VA G+ +L K +HRD+ + N +LD F
Sbjct: 126 HNPTV--------------KDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFT 169
Query: 234 AHISDFGLAR-----RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMI 288
++DFGLAR D+ H+ ++ + +M E L T DV+SFG+L+
Sbjct: 170 VKVADFGLARDMYDKEFDSVHNKTGAKLP--VKWMALESL-QTQKFTTKSDVWSFGVLLW 226
Query: 289 EIATQIRPNLPVV 301
E+ T+ P P V
Sbjct: 227 ELMTRGAPPYPDV 239
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 31/253 (12%)
Query: 61 DSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTVAIKKLD 115
D ++ +P L Q +I + +++IG G FG VY L + A+K L+
Sbjct: 8 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 67
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQWLHDTS 173
+ G +F E + H N++ +LG C S +++ ++++G L ++ + +
Sbjct: 68 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 127
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
N V + + VA G+ +L K +HRD+ + N +LD F
Sbjct: 128 HNPTV--------------KDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFT 171
Query: 234 AHISDFGLAR-----RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMI 288
++DFGLAR D+ H+ ++ + +M E L T DV+SFG+L+
Sbjct: 172 VKVADFGLARDMYDKEFDSVHNKTGAKLP--VKWMALESL-QTQKFTTKSDVWSFGVLLW 228
Query: 289 EIATQIRPNLPVV 301
E+ T+ P P V
Sbjct: 229 ELMTRGAPPYPDV 241
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
+ IG G FG V G VA+K + DA + F AE + +LRH N+V++LG
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 148 A---SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
GL ++ E++ GSL +L SR V G L +K V
Sbjct: 69 VEEKGGL--YIVTEYMAKGSLVDYLR--SRGRSVLGGDCL-----------LKFSLDVCE 113
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM--GY 262
+ YL G +HRD+ + NVL+ D A +SDFGL + STQ G + +
Sbjct: 114 AMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKLPVKW 165
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEIATQIR---PNLPV 300
PE L +T DV+SFGIL+ EI + R P +P+
Sbjct: 166 TAPEALREKKFSTKS-DVWSFGILLWEIYSFGRVPYPRIPL 205
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 31/253 (12%)
Query: 61 DSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTVAIKKLD 115
D ++ +P L Q +I + +++IG G FG VY L + A+K L+
Sbjct: 9 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 68
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQWLHDTS 173
+ G +F E + H N++ +LG C S +++ ++++G L ++ + +
Sbjct: 69 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 128
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
N V + + VA G+ +L K +HRD+ + N +LD F
Sbjct: 129 HNPTV--------------KDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFT 172
Query: 234 AHISDFGLAR-----RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMI 288
++DFGLAR D+ H+ ++ + +M E L T DV+SFG+L+
Sbjct: 173 VKVADFGLARDMLDKEFDSVHNKTGAKLP--VKWMALESL-QTQKFTTKSDVWSFGVLLW 229
Query: 289 EIATQIRPNLPVV 301
E+ T+ P P V
Sbjct: 230 ELMTRGAPPYPDV 242
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 31/253 (12%)
Query: 61 DSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTVAIKKLD 115
D ++ +P L Q +I + +++IG G FG VY L + A+K L+
Sbjct: 8 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 67
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQWLHDTS 173
+ G +F E + H N++ +LG C S +++ ++++G L ++ + +
Sbjct: 68 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 127
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
N V + + VA G+ +L K +HRD+ + N +LD F
Sbjct: 128 HNPTV--------------KDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFT 171
Query: 234 AHISDFGLAR-----RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMI 288
++DFGLAR D+ H+ ++ + +M E L T DV+SFG+L+
Sbjct: 172 VKVADFGLARDMYDKEFDSVHNKTGAKLP--VKWMALESL-QTQKFTTKSDVWSFGVLLW 228
Query: 289 EIATQIRPNLPVV 301
E+ T+ P P V
Sbjct: 229 ELMTRGAPPYPDV 241
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
+ IG G FG V G VA+K + DA + F AE + +LRH N+V++LG
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 148 A---SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
GL ++ E++ GSL +L SR V G L +K V
Sbjct: 256 VEEKGGL--YIVTEYMAKGSLVDYLR--SRGRSVLGGDCL-----------LKFSLDVCE 300
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM--GY 262
+ YL G +HRD+ + NVL+ D A +SDFGL + STQ G + +
Sbjct: 301 AMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKLPVKW 352
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEIATQIR---PNLPV 300
PE L +T DV+SFGIL+ EI + R P +P+
Sbjct: 353 TAPEALREKKFSTKS-DVWSFGILLWEIYSFGRVPYPRIPL 392
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 31/253 (12%)
Query: 61 DSASFDPSLSQISMSELIDATDNF-STDKIIGDGSFGFVYKAKL----SSGVTVAIKKLD 115
D ++ +P L Q +I + +++IG G FG VY L + A+K L+
Sbjct: 9 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 68
Query: 116 KDAFQG-FREFRAEMETLGKLRHRNIVKILGYCA-SGLDRVLIYEFVENGSLDQWLHDTS 173
+ G +F E + H N++ +LG C S +++ ++++G L ++ + +
Sbjct: 69 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 128
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
N V + + VA G+ +L K +HRD+ + N +LD F
Sbjct: 129 HNPTV--------------KDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFT 172
Query: 234 AHISDFGLAR-----RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMI 288
++DFGLAR D+ H+ ++ + +M E L T DV+SFG+L+
Sbjct: 173 VKVADFGLARDMYDKEFDSVHNKTGAKLP--VKWMALESL-QTQKFTTKSDVWSFGVLLW 229
Query: 289 EIATQIRPNLPVV 301
E+ T+ P P V
Sbjct: 230 ELMTRGAPPYPDV 242
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYC 147
+ IG G FG V G VA+K + DA + F AE + +LRH N+V++LG
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 148 A---SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
GL ++ E++ GSL +L SR V G L +K V
Sbjct: 84 VEEKGGL--YIVTEYMAKGSLVDYLR--SRGRSVLGGDCL-----------LKFSLDVCE 128
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM--GY 262
+ YL G +HRD+ + NVL+ D A +SDFGL + STQ G + +
Sbjct: 129 AMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKLPVKW 180
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEIATQIR---PNLPV 300
PE L +T DV+SFGIL+ EI + R P +P+
Sbjct: 181 TAPEALREKKFSTKS-DVWSFGILLWEIYSFGRVPYPRIPL 220
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 27/228 (11%)
Query: 83 NFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG--FREFRAEMETLGKLRHRN 139
N+ K IG G+F V A+ + +G VA++ +DK ++ E+ + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IVK+ + L+ E+ G + +L R + E R K
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK--------------EARAKF- 119
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
R + + + Y H +K I+HRD+K+ N+LLD+D I+DFG + + + + G+
Sbjct: 120 RQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDEFCGS 175
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
Y PE G +DV+S G+++ T + +LP DGQ +
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILY---TLVSGSLP--FDGQNL 218
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRH 137
D ++ + IG G+ G VY A +++G VAI++++ E+ + + ++
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 77
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NIV L G + ++ E++ GSL + +T ++ Q+ ++C
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG-----QIAAVC--------- 123
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
R L +LH + +IHR+IKS N+LL D ++DFG +I S ST V
Sbjct: 124 --RECLQALEFLHSNQ--VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV- 178
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT +M PE + A +D++S GI+ IE+
Sbjct: 179 GTPYWMAPEVV-TRKAYGPKVDIWSLGIMAIEM 210
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 18/179 (10%)
Query: 122 FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGS 181
+ +F+ E++ + +++ + G + + +IYE++EN S+ ++ D+
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF-------DEYFFV 139
Query: 182 KQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGL 241
N C + + I++ V N +Y+H EK I HRD+K SN+L+D + +SDFG
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHN-EKNICHRDVKPSNILMDKNGRVKLSDFG- 197
Query: 242 ARRIDTSHSHVSTQVAGTMG---YMPPEYLGGNTAAT-VMLDVYSFGILMIEIATQIRP 296
S V ++ G+ G +MPPE+ ++ +D++S GI + + + P
Sbjct: 198 -----ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 27/228 (11%)
Query: 83 NFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQ--GFREFRAEMETLGKLRHRN 139
N+ K IG G+F V A+ + +G VAIK +DK ++ E+ + L H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IVK+ + LI E+ G + +L R + E R K
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK--------------EARSKF- 120
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
R + + + Y H +K I+HRD+K+ N+LLD+D I+DFG + G
Sbjct: 121 RQIVSAVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGA 176
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
Y PE G +DV+S G+++ T + +LP DGQ +
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILY---TLVSGSLP--FDGQNL 219
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 127/311 (40%), Gaps = 59/311 (18%)
Query: 56 SIALFDSASFDPSLSQIS--MSELIDATDNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKK 113
+++L + SF SQ S + E + ++IG G FG VY + V + +
Sbjct: 5 NLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLID 64
Query: 114 LDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTS 173
+++D + F+ E+ + RH N+V +G C S +I + +L + D
Sbjct: 65 IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK 124
Query: 174 RNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE 233
DV+ ++Q I + + G+ YLH K I+H+D+KS NV D+ +
Sbjct: 125 IVLDVNKTRQ--------------IAQEIVKGMGYLHA--KGILHKDLKSKNVFYDNG-K 167
Query: 234 AHISDFGL---------ARRIDTSH------SHVSTQVAGTMGYMPPEYLGGNTAATVML 278
I+DFGL RR D H++ ++ + + P+ +
Sbjct: 168 VVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEI---IRQLSPDTEEDKLPFSKHS 224
Query: 279 DVYSFGILMIEI-------------------ATQIRPNLPVVLDGQEVG---LLEWARTM 316
DV++ G + E+ T ++PNL + G+E+ L WA
Sbjct: 225 DVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQ 284
Query: 317 EARNKEIEMVD 327
E R +++D
Sbjct: 285 EERPTFTKLMD 295
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 27/228 (11%)
Query: 83 NFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG--FREFRAEMETLGKLRHRN 139
N+ K IG G+F V A+ + +G VA++ +DK ++ E+ + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IVK+ + L+ E+ G + +L R + E R K
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK--------------EARAKF- 119
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
R + + + Y H +K I+HRD+K+ N+LLD+D I+DFG + T + + T G+
Sbjct: 120 RQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDT-FCGS 175
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
Y PE G +DV+S G+++ T + +LP DGQ +
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILY---TLVSGSLP--FDGQNL 218
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 27/228 (11%)
Query: 83 NFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG--FREFRAEMETLGKLRHRN 139
N+ K IG G+F V A+ + +G VA+K +DK ++ E+ + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IVK+ + L+ E+ G + +L R + E R K
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK--------------EARAKF- 119
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
R + + + Y H +K I+HRD+K+ N+LLD+D I+DFG + + + G
Sbjct: 120 RQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDAFCGA 175
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
Y PE G +DV+S G+++ T + +LP DGQ +
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILY---TLVSGSLP--FDGQNL 218
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRH 137
D ++ + IG G+ G VY A +++G VAI++++ E+ + + ++
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 77
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NIV L G + ++ E++ GSL + +T ++ Q+ ++C
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG-----QIAAVC--------- 123
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
R L +LH + +IHRDIKS N+LL D ++DFG +I S S V
Sbjct: 124 --RECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV- 178
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT +M PE + A +D++S GI+ IE+
Sbjct: 179 GTPYWMAPEVV-TRKAYGPKVDIWSLGIMAIEM 210
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRH 137
D ++ + IG G+ G VY A +++G VAI++++ E+ + + ++
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 76
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NIV L G + ++ E++ GSL + +T ++ Q+ ++C
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG-----QIAAVC--------- 122
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
R L +LH + +IHRDIKS N+LL D ++DFG +I S S V
Sbjct: 123 --RECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV- 177
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT +M PE + A +D++S GI+ IE+
Sbjct: 178 GTPYWMAPEVV-TRKAYGPKVDIWSLGIMAIEM 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 90 IGDGSFG----FVY-KAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVKI 143
+G+G FG + Y +G VA+K L D R ++ E++ L L H +I+K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 144 LGYCASGLDRVL--IYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
G C ++ L + E+V GSL +L S G QL + +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQL-----------LLFAQQ 125
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG--T 259
+ G+AYLH + IHR++ + NVLLD+D I DFGLA+ + H + + G
Sbjct: 126 ICEGMAYLHA--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
+ + PE L DV+SFG+ + E+ T
Sbjct: 184 VFWYAPECL-KEYKFYYASDVWSFGVTLYELLTH 216
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 35/232 (15%)
Query: 83 NFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG--FREFRAEMETLGKLRHRN 139
N+ K IG G+F V A+ + +G VA+K +DK ++ E+ + L H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW----ETR 195
IVK+ + L+ E+ G + + L W E R
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEV------------------FDYLVAHGWMKEKEAR 109
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
K R + + + Y H +K I+HRD+K+ N+LLD+D I+DFG + T + + T
Sbjct: 110 AKF-RQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDT- 164
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
G+ Y PE G +DV+S G+++ T + +LP DGQ +
Sbjct: 165 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY---TLVSGSLP--FDGQNL 211
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 25/214 (11%)
Query: 90 IGDGSFGFVYK--AKLSSGVTVAIKKLDKDAFQG--FREFRAEMETLGKLRHRNIVKILG 145
+G+G++ VYK +KL+ + VA+K++ + +G R E+ L L+H NIV +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLHD 67
Query: 146 YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANG 205
+ L++E+++ L Q+L D ++ K + + G
Sbjct: 68 IIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLF--------------LFQLLRG 112
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPP 265
LAY H + ++HRD+K N+L++ E ++DFGLAR +V T+ Y PP
Sbjct: 113 LAYCH--RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPP 169
Query: 266 EYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
+ L G+T + +D++ G + E+AT RP P
Sbjct: 170 DILLGSTDYSTQIDMWGVGCIFYEMATG-RPLFP 202
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRH 137
D ++ + IG G+ G VY A +++G VAI++++ E+ + + ++
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 76
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NIV L G + ++ E++ GSL + +T ++ Q+ ++C
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG-----QIAAVC--------- 122
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
R L +LH + +IHRDIKS N+LL D ++DFG +I S S V
Sbjct: 123 --RECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV- 177
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT +M PE + A +D++S GI+ IE+
Sbjct: 178 GTPYWMAPEVV-TRKAYGPKVDIWSLGIMAIEM 209
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 25/217 (11%)
Query: 89 IIGDGSFGFVYKAK-LSSGVTVAIKKLD----KDAFQGF-REFRAEMETLGKLRHRNIVK 142
+G+G F VYKA+ ++ VAIKK+ +A G R E++ L +L H NI+
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+L + L+++F+E D++ + NSL + ++ +
Sbjct: 77 LLDAFGHKSNISLVFDFMET--------------DLEVIIKDNSLVLTPSHIKAYMLMTL 122
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
GL YLH + I+HRD+K +N+LLD + ++DFGLA+ + + QV T Y
Sbjct: 123 -QGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWY 178
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
PE L G V +D+++ G ++ E+ ++ P LP
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELLLRV-PFLP 214
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 24/225 (10%)
Query: 74 MSELIDATDNFSTDKIIGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFR-EFRAEMET 131
+ EL D D+F +G G+ G V+K + SG+ +A K + + R + E++
Sbjct: 19 VGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 76
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
L + IV G S + + E ++ GSLDQ L R +
Sbjct: 77 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---------------IP 121
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSH 251
+ K+ V GL YL K I+HRD+K SN+L++S E + DFG++ ++ S
Sbjct: 122 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 177
Query: 252 VSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
++ GT YM PE L G T +V D++S G+ ++E+A P
Sbjct: 178 MANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 90 IGDGSFG----FVY-KAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVKI 143
+G+G FG + Y +G VA+K L D R ++ E++ L L H +I+K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 144 LGYCASGLDRVL--IYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
G C ++ L + E+V GSL +L S G QL + +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQL-----------LLFAQQ 125
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG--T 259
+ G+AYLH + IHR++ + NVLLD+D I DFGLA+ + H + + G
Sbjct: 126 ICEGMAYLHS--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
+ + PE L DV+SFG+ + E+ T
Sbjct: 184 VFWYAPECL-KEYKFYYASDVWSFGVTLYELLTH 216
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 113/235 (48%), Gaps = 31/235 (13%)
Query: 67 PSLSQISMSELI-DATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF-- 122
P+ + +++ I + + + T +G G++G V + + SG+ +A+KKL + FQ
Sbjct: 35 PTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSR-PFQSIIH 93
Query: 123 --REFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG 180
R +R E+ L ++H N++ +L F SL++ +D + G
Sbjct: 94 AKRTYR-ELRLLKHMKHENVIGLLDV------------FTPATSLEE-FNDVYLVTHLMG 139
Query: 181 SKQLNSL--CPLSWETRVK-IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHIS 237
+ LN++ C + V+ ++ + GL Y+H + IIHRD+K SN+ ++ D E I
Sbjct: 140 A-DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKIL 196
Query: 238 DFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
DFGLAR D T T Y PE + + +D++S G +M E+ T
Sbjct: 197 DFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 30/224 (13%)
Query: 84 FSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKI 143
++ K+IG+GSFG V++AKL VAIKK+ +D R E++ + ++H N+V +
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDL 97
Query: 144 LGYCASGLDRV------LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+ S D+ L+ E+V + ++ SR+ +L P+ +K
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVP-----ETVYRASRH-----YAKLKQTMPMLL---IK 144
Query: 198 I-VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA-HISDFGLARRIDTSHSHVSTQ 255
+ + + LAY+H + I HRDIK N+LLD + DFG A+ + +VS
Sbjct: 145 LYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXI 202
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
+ Y PE + G T T +D++S G +M E+ Q +P P
Sbjct: 203 CSRY--YRAPELIFGATNYTTNIDIWSTGCVMAEL-MQGQPLFP 243
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLSSGVTV----AIKKLDKDAF----QGFREFRAEMETLG 133
+NF K++G G++G V+ + SG A+K L K + R E + L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 134 KLRHRNIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+R + L Y ++ LI +++ G L L R
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT---------------- 157
Query: 193 ETRVKIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSH 251
E V+I G + L +LH L II+RDIK N+LLDS+ ++DFGL++ +
Sbjct: 158 EHEVQIYVGEIVLALEHLHKL--GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 215
Query: 252 VSTQVAGTMGYMPPEYL-GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLL 310
+ GT+ YM P+ + GG++ +D +S G+LM E+ T P +DG++
Sbjct: 216 RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS---PFTVDGEKNSQA 272
Query: 311 EWAR 314
E +R
Sbjct: 273 EISR 276
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 90 IGDGSFG----FVY-KAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVKI 143
+G+G FG + Y +G VA+K L + R ++ E+E L L H +IVK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 144 LGYCASGLDRV--LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
G C ++ L+ E+V GSL +L G QL + +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQL-----------LLFAQQ 120
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG--T 259
+ G+AYLH + IHR + + NVLLD+D I DFGLA+ + H + + G
Sbjct: 121 ICEGMAYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPN 297
+ + PE L DV+SFG+ + E+ T N
Sbjct: 179 VFWYAPECL-KECKFYYASDVWSFGVTLYELLTYCDSN 215
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 90 IGDGSFG----FVY-KAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVKI 143
+G+G FG + Y +G VA+K L + R ++ E+E L L H +IVK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 144 LGYCASGLDRV--LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
G C ++ L+ E+V GSL +L G QL + +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQL-----------LLFAQQ 119
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG--T 259
+ G+AYLH + IHR + + NVLLD+D I DFGLA+ + H + + G
Sbjct: 120 ICEGMAYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPN 297
+ + PE L DV+SFG+ + E+ T N
Sbjct: 178 VFWYAPECL-KECKFYYASDVWSFGVTLYELLTYCDSN 214
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+F ++G G+FG V KA+ + AIKK+ + + +E+ L L H+ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 142 KILGYCASGLDR----------------VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN 185
+ Y A+ L+R + E+ ENG+L +H S+ LN
Sbjct: 66 R---YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH----------SENLN 112
Query: 186 SLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
W ++ R + L+Y+H + IIHRD+K N+ +D I DFGLA+ +
Sbjct: 113 QQRDEYW----RLFRQILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 246 DTS-------------HSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
S S T GT Y+ E L G +D+YS GI+ E+
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 27/228 (11%)
Query: 83 NFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG--FREFRAEMETLGKLRHRN 139
N+ K IG G+F V A+ + +G VA+K +DK ++ E+ L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IVK+ + L+ E+ G + +L R + E R K
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK--------------EARAKF- 119
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
R + + + Y H +K I+HRD+K+ N+LLD+D I+DFG + + + G
Sbjct: 120 RQIVSAVQYCH--QKFIVHRDLKAENLLLDADXNIKIADFGFSNEF--TFGNKLDAFCGA 175
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEV 307
Y PE G +DV+S G+++ T + +LP DGQ +
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILY---TLVSGSLP--FDGQNL 218
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLSSGVTV----AIKKLDKDAFQGFREFRAEME--TLGKLR 136
F K++G GSFG V+ K SG A+K L K + R +ME L ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H IVK+ + LI +F+ G L L SK++ + E V
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-----------SKEV-----MFTEEDV 128
Query: 197 KI-VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
K + +A L +LH L II+RD+K N+LLD + ++DFGL++ H +
Sbjct: 129 KFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYS 185
Query: 256 VAGTMGYMPPEYLG--GNTAATVMLDVYSFGILMIEIATQIRP 296
GT+ YM PE + G+T + D +SFG+LM E+ T P
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSA---DWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLSSGVTV----AIKKLDKDAFQGFREFRAEME--TLGKLR 136
F K++G GSFG V+ K SG A+K L K + R +ME L ++
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H IVK+ + LI +F+ G L L + D L L
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL--------- 136
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A L +LH L II+RD+K N+LLD + ++DFGL++ H +
Sbjct: 137 ------ALALDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSF 187
Query: 257 AGTMGYMPPEYLG--GNTAATVMLDVYSFGILMIEIATQIRP 296
GT+ YM PE + G+T + D +SFG+LM E+ T P
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSA---DWWSFGVLMFEMLTGTLP 226
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 30/234 (12%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKL---DKDAFQGFREFRAEMETLGK 134
+ + +F ++G+G++G V A +G VAIKK+ DK F R R E++ L
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLF-ALRTLR-EIKILKH 65
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
+H NI+ I + R +E + Q L T + + S Q+ LS +
Sbjct: 66 FKHENIITIFN-----IQRPDSFENFNEVYIIQELMQTDLHRVI--STQM-----LSDDH 113
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS- 253
+ + LHG +IHRD+K SN+L++S+ + + DFGLAR ID S + S
Sbjct: 114 IQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 254 --------TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + + +DV+S G ++ E+ + RP P
Sbjct: 172 PTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR-RPIFP 224
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 30/234 (12%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKL---DKDAFQGFREFRAEMETLGK 134
+ + +F ++G+G++G V A +G VAIKK+ DK F R R E++ L
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLF-ALRTLR-EIKILKH 65
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
+H NI+ I + R +E + Q L T + + S Q+ LS +
Sbjct: 66 FKHENIITIFN-----IQRPDSFENFNEVYIIQELMQTDLHRVI--STQM-----LSDDH 113
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS- 253
+ + LHG +IHRD+K SN+L++S+ + + DFGLAR ID S + S
Sbjct: 114 IQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 254 --------TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T+ T Y PE + + + +DV+S G ++ E+ + RP P
Sbjct: 172 PTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR-RPIFP 224
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLSSGVTV----AIKKLDKDAFQGFREFRAEME--TLGKLR 136
F K++G GSFG V+ K SG A+K L K + R +ME L ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H IVK+ + LI +F+ G L L + D L L
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL--------- 135
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A L +LH L II+RD+K N+LLD + ++DFGL++ H +
Sbjct: 136 ------ALALDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSF 186
Query: 257 AGTMGYMPPEYLG--GNTAATVMLDVYSFGILMIEIATQIRP 296
GT+ YM PE + G+T + D +SFG+LM E+ T P
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSA---DWWSFGVLMFEMLTGTLP 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 90 IGDGSFGFV-----YKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G+GSFG V YK + + ++L K + R R E+ L LRH +I+K+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVER-EISYLKLLRHPHIIKLY 75
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL-CPLSWETRVKIVRGVA 203
+ D V++ E+ G L ++ + R + +G + + C + + R KIV
Sbjct: 76 DVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIV---- 130
Query: 204 NGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYM 263
HRD+K N+LLD + I+DFGL+ I T + + T G+ Y
Sbjct: 131 --------------HRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKTS-CGSPNYA 174
Query: 264 PPEYLGGNTAATVMLDVYSFGILM 287
PE + G A +DV+S GI++
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVL 198
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL K FQ R +R E+ L ++H N++ +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSK-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 99
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 100 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 145
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 146 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 199
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 104/225 (46%), Gaps = 36/225 (16%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLD-KDAFQGF-----REFRAEMETL 132
AT + IG G++G VYKA+ SG VA+K + + +G RE A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREV-ALLRRL 60
Query: 133 GKLRHRNIVKILGYCA-SGLDR----VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL 187
H N+V+++ CA S DR L++E V D D L+
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV----------------DQDLRTYLDKA 104
Query: 188 CP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
P L ET ++R GL +LH I+HRD+K N+L+ S ++DFGLAR
Sbjct: 105 PPPGLPAETIKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLARIY 162
Query: 246 DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
S+ V T+ Y PE L +T AT +D++S G + E+
Sbjct: 163 --SYQMALAPVVVTLWYRAPEVLLQSTYATP-VDMWSVGCIFAEM 204
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 53/233 (22%)
Query: 88 KIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQG-------FREFRAEMETLGKLRHRN 139
K +G G++G V+K+ +G VA+KK+ DAFQ FRE E G H N
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELSG---HEN 70
Query: 140 IVKILGYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
IV +L + DR L+++++E D+ + N L P+ +
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMET--------------DLHAVIRANILEPVH---KQY 113
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR-----RIDTSHSHV 252
+V + + YLH ++HRD+K SN+LL+++ ++DFGL+R R T++ +
Sbjct: 114 VVYQLIKVIKYLHS--GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPL 171
Query: 253 S---------------TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
S T T Y PE L G+T T +D++S G ++ EI
Sbjct: 172 SINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEI 224
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 88 KIIGDGSFGFVYKAKL-----SSGVTVAIKKL-DKDAFQGFREFRAEMETLGKLRHRNIV 141
K++G G FG V+K S + V IK + DK Q F+ M +G L H +IV
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
++LG C G L+ +++ GSL L ++ G + L L+W ++
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSL---LDHVRQHRGALGPQLL-----LNWGVQI----- 124
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT-M 260
A G+ YL E ++HR++ + NVLL S + ++DFG+A + + A T +
Sbjct: 125 -AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 261 GYMPPE--YLGGNTAATVMLDVYSFGILMIEIAT 292
+M E + G T + DV+S+G+ + E+ T
Sbjct: 182 KWMALESIHFGKYTHQS---DVWSYGVTVWELMT 212
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 94
Query: 136 RHRNIVKILGYCASGLDRVLI-YEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
H VK L +C +++ + +NG L +++ D+ C T
Sbjct: 95 DHPFFVK-LYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C-----T 139
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV-S 253
R + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ + +
Sbjct: 140 RFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 196
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 197 NXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 238
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
IG G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 92
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 93 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 138
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 139 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRW 192
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAF-----QGFREFRAEMETLGKLR 136
N+ K +G+GSFG V A ++G VA+K ++K QG E+ L LR
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 62
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H +I+K+ S + +++ E+ N D + ++ E R
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ---------------EAR- 106
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+ + + + + Y H I+HRD+K N+LLD I+DFGL+ I T + + T
Sbjct: 107 RFFQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTS- 162
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
G+ Y PE + G A +DV+S G+++
Sbjct: 163 CGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 193
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKD---------AFQGFREFRAEM 129
AT + IG G++G VYKA+ SG VA+K + RE A +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV-ALL 65
Query: 130 ETLGKLRHRNIVKILGYCA-SGLDR----VLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
L H N+V+++ CA S DR L++E V D D L
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV----------------DQDLRTYL 109
Query: 185 NSLCP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLA 242
+ P L ET ++R GL +LH I+HRD+K N+L+ S ++DFGLA
Sbjct: 110 DKAPPPGLPAETIKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLA 167
Query: 243 RRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
R S+ T V T+ Y PE L +T AT +D++S G + E+
Sbjct: 168 RIY--SYQMALTPVVVTLWYRAPEVLLQSTYATP-VDMWSVGCIFAEM 212
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 37/243 (15%)
Query: 69 LSQISMSELIDA------TDNFSTDKIIGDGSFGFVYKAKL----SSGVTVAIKKLDKDA 118
L +IS++ + A +F K++G GSFG V+ + SG A+K L K
Sbjct: 9 LKEISITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKAT 68
Query: 119 FQGFREFRAEME--TLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRND 176
+ R +ME L + H +VK+ + LI +F+ G L L
Sbjct: 69 LKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL------- 121
Query: 177 DVDGSKQLNSLCPLSWETRVKI-VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAH 235
SK++ + E VK + +A GL +LH L II+RD+K N+LLD +
Sbjct: 122 ----SKEV-----MFTEEDVKFYLAELALGLDHLHSLG--IIYRDLKPENILLDEEGHIK 170
Query: 236 ISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLG--GNTAATVMLDVYSFGILMIEIATQ 293
++DFGL++ H + GT+ YM PE + G++ + D +S+G+LM E+ T
Sbjct: 171 LTDFGLSKEA-IDHEKKAYSFCGTVEYMAPEVVNRQGHSHSA---DWWSYGVLMFEMLTG 226
Query: 294 IRP 296
P
Sbjct: 227 SLP 229
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 88 KIIGDGSFGFVYKAKL-----SSGVTVAIKKL-DKDAFQGFREFRAEMETLGKLRHRNIV 141
K++G G FG V+K S + V IK + DK Q F+ M +G L H +IV
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
++LG C G L+ +++ GSL L ++ G + L L+W ++
Sbjct: 97 RLLGLC-PGSSLQLVTQYLPLGSL---LDHVRQHRGALGPQLL-----LNWGVQI----- 142
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT-M 260
A G+ YL E ++HR++ + NVLL S + ++DFG+A + + A T +
Sbjct: 143 -AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 261 GYMPPE--YLGGNTAATVMLDVYSFGILMIEIAT 292
+M E + G T + DV+S+G+ + E+ T
Sbjct: 200 KWMALESIHFGKYTHQS---DVWSYGVTVWELMT 230
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 90 IGDGSFGFVYKAKLS----SGVTVAIKKLDKDAFQGFR---EFRAEMETLGKLRHRNIVK 142
+G G+FG K K+ +G VA+K L++ + + + E++ L RH +I+K
Sbjct: 19 LGVGTFG---KVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+ ++ D ++ E+V G L ++ R ++++ + + + +
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---------------LFQQI 120
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ + Y H ++HRD+K NVLLD+ A I+DFGL+ + S G+ Y
Sbjct: 121 LSAVDYCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRTSCGSPNY 176
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
PE + G A +D++S G+++ + P
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 90 IGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFR---EFRAEMETLGKLRHRNIVKILG 145
+G G+FG V + +G VA+K L++ + + + E++ L RH +I+K+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 146 YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANG 205
++ D ++ E+V G L ++ R ++++ + + + + +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---------------LFQQILSA 123
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPP 265
+ Y H ++HRD+K NVLLD+ A I+DFGL+ + S G+ Y P
Sbjct: 124 VDYCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRDSCGSPNYAAP 179
Query: 266 EYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
E + G A +D++S G+++ + P
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 113
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 114 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 137/310 (44%), Gaps = 56/310 (18%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKL 135
+D + F+ + IG GSFG V+K + VAIK +D ++A + + E+ L +
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGS-LDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
+ K G +I E++ GS LD L PL
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-----------------LLEPGPLDETQ 105
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVST 254
I+R + GL YLH +K IHRDIK++NVLL E ++DFG+A ++ + +T
Sbjct: 106 IATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 163
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA------TQIRP---------NLP 299
V GT +M PE + +A D++S GI IE+A +++ P N P
Sbjct: 164 FV-GTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP 221
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
L+G +++ ++ E V++ +++E +E + + N K
Sbjct: 222 PTLEGN------YSKPLK------EFVEACLNKEPSFRPTAKELLKHKFILRNAKK---- 265
Query: 360 AMSYVVQLLD 369
SY+ +L+D
Sbjct: 266 -TSYLTELID 274
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAF-----QGFREFRAEMETLGKLR 136
N+ K +G+GSFG V A ++G VA+K ++K QG E+ L LR
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 66
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H +I+K+ S + +++ E+ N D + ++ E R
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ---------------EAR- 110
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+ + + + + Y H I+HRD+K N+LLD I+DFGL+ I T + + T
Sbjct: 111 RFFQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTS- 166
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
G+ Y PE + G A +DV+S G+++
Sbjct: 167 CGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAF-----QGFREFRAEMETLGKLR 136
N+ K +G+GSFG V A ++G VA+K ++K QG E+ L LR
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 72
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H +I+K+ S + +++ E+ N D + ++ E R
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ---------------EAR- 116
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+ + + + + Y H I+HRD+K N+LLD I+DFGL+ I T + + T
Sbjct: 117 RFFQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTS- 172
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
G+ Y PE + G A +DV+S G+++
Sbjct: 173 CGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 111/234 (47%), Gaps = 30/234 (12%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKL---DKDAFQGFREFRAEMETLGK 134
+ + +F ++G+G++G V A +G VAIKK+ DK F R R E++ L
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLF-ALRTLR-EIKILKH 65
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
+H NI+ I + R +E + Q L T + + S Q+ LS +
Sbjct: 66 FKHENIITIFN-----IQRPDSFENFNEVYIIQELMQTDLHRVI--STQM-----LSDDH 113
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS---HSH 251
+ + LHG +IHRD+K SN+L++S+ + + DFGLAR ID S +S
Sbjct: 114 IQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 252 VSTQVAG------TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
+ Q +G T Y PE + + + +DV+S G ++ E+ + RP P
Sbjct: 172 PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR-RPIFP 224
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAF-----QGFREFRAEMETLGKLR 136
N+ K +G+GSFG V A ++G VA+K ++K QG E+ L LR
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 71
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H +I+K+ S + +++ E+ N D + ++ E R
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ---------------EAR- 115
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+ + + + + Y H I+HRD+K N+LLD I+DFGL+ I T + + T
Sbjct: 116 RFFQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTS- 171
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
G+ Y PE + G A +DV+S G+++
Sbjct: 172 CGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 104/225 (46%), Gaps = 36/225 (16%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLD-KDAFQGF-----REFRAEMETL 132
AT + IG G++G VYKA+ SG VA+K + + +G RE A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREV-ALLRRL 60
Query: 133 GKLRHRNIVKILGYCA-SGLDR----VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL 187
H N+V+++ CA S DR L++E V D D L+
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV----------------DQDLRTYLDKA 104
Query: 188 CP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
P L ET ++R GL +LH I+HRD+K N+L+ S ++DFGLAR
Sbjct: 105 PPPGLPAETIKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLARIY 162
Query: 246 DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
S+ V T+ Y PE L +T AT +D++S G + E+
Sbjct: 163 --SYQMALDPVVVTLWYRAPEVLLQSTYATP-VDMWSVGCIFAEM 204
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 44/224 (19%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
IG G FG V++ K G VA+K ++ FRE AE+ LRH NI LG+ A
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENI---LGFIA 64
Query: 149 -------SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+ L+ ++ E+GSL +L+ + ++ E +K+
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT----------------VTVEGMIKLALS 108
Query: 202 VANGLAYLH----GLE-KPII-HRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS-- 253
A+GLA+LH G + KP I HRD+KS N+L+ + I+D GLA R D++ +
Sbjct: 109 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 168
Query: 254 -TQVAGTMGYMPPEYLGGNT-----AATVMLDVYSFGILMIEIA 291
GT YM PE L + + D+Y+ G++ EIA
Sbjct: 169 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGXVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 136/309 (44%), Gaps = 54/309 (17%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKL 135
+D + F+ + IG GSFG V+K + VAIK +D ++A + + E+ L +
Sbjct: 23 MDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 82
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
+ K G +I E++ GS + L PL
Sbjct: 83 DSPYVTKYYGSYLKDTKLWIIMEYLGGGS----------------ALDLLEPGPLDETQI 126
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
I+R + GL YLH +K IHRDIK++NVLL E ++DFG+A ++ + +T
Sbjct: 127 ATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 184
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA------TQIRP---------NLPV 300
V GT +M PE + +A D++S GI IE+A +++ P N P
Sbjct: 185 V-GTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP 242
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
L+G +++ ++ E V++ +++E +E + + N K
Sbjct: 243 TLEGN------YSKPLK------EFVEACLNKEPSFRPTAKELLKHKFILRNAKK----- 285
Query: 361 MSYVVQLLD 369
SY+ +L+D
Sbjct: 286 TSYLTELID 294
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 92
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 93 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 138
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 139 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRW 192
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 92
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 93 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 138
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 139 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 192
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 86
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 87 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 132
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 133 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 186
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLR 136
D D + ++G G+F V A+ + VAIK + K+A +G E+ L K++
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIV + SG LI + V G L + + + D S
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--------------- 119
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVL---LDSDFEAHISDFGLARRIDTSHSHVS 253
+++ V + + YLH L I+HRD+K N+L LD D + ISDFGL++ D V
Sbjct: 120 RLIFQVLDAVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVL 175
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLE 311
+ GT GY+ PE L + +D +S G+ IA + P D + L E
Sbjct: 176 STACGTPGYVAPEVLAQKPYSKA-VDCWSIGV----IAYILLCGYPPFYDENDAKLFE 228
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 114
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 115 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 168
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 94
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 95 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 140
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 141 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 194
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 89
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 90 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET---------C----- 133
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 134 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A+ D+++ G ++ ++ + P
Sbjct: 191 ANSFVGTAQYVSPELLTEKSASKSS-DLWALGCIIYQLVAGLPP 233
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 92
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 93 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 138
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 139 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 192
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 89
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 90 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 135
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 136 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 189
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLR 136
D D + ++G G+F V A+ + VAIK + K+A +G E+ L K++
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIV + SG LI + V G L + + + D S
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--------------- 119
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVL---LDSDFEAHISDFGLARRIDTSHSHVS 253
+++ V + + YLH L I+HRD+K N+L LD D + ISDFGL++ D V
Sbjct: 120 RLIFQVLDAVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVL 175
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLE 311
+ GT GY+ PE L + +D +S G+ IA + P D + L E
Sbjct: 176 STACGTPGYVAPEVLAQKPYSKA-VDCWSIGV----IAYILLCGYPPFYDENDAKLFE 228
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 104/225 (46%), Gaps = 36/225 (16%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLD-KDAFQGF-----REFRAEMETL 132
AT + IG G++G VYKA+ SG VA+K + + +G RE A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREV-ALLRRL 60
Query: 133 GKLRHRNIVKILGYCA-SGLDR----VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL 187
H N+V+++ CA S DR L++E V D D L+
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV----------------DQDLRTYLDKA 104
Query: 188 CP--LSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
P L ET ++R GL +LH I+HRD+K N+L+ S ++DFGLAR
Sbjct: 105 PPPGLPAETIKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLARIY 162
Query: 246 DTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
S+ V T+ Y PE L +T AT +D++S G + E+
Sbjct: 163 --SYQMALFPVVVTLWYRAPEVLLQSTYATP-VDMWSVGCIFAEM 204
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 84
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 85 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 130
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 131 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 184
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 67
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 68 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 111
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 112 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 168
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 169 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 211
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 98
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 99 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 144
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 145 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRW 198
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 114
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 115 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 44/224 (19%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
IG G FG V++ K G VA+K ++ FRE AE+ LRH NI LG+ A
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENI---LGFIA 103
Query: 149 -------SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+ L+ ++ E+GSL +L+ + ++ E +K+
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT----------------VTVEGMIKLALS 147
Query: 202 VANGLAYLH----GLE-KPII-HRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS-- 253
A+GLA+LH G + KP I HRD+KS N+L+ + I+D GLA R D++ +
Sbjct: 148 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 207
Query: 254 -TQVAGTMGYMPPEYLGGNT-----AATVMLDVYSFGILMIEIA 291
GT YM PE L + + D+Y+ G++ EIA
Sbjct: 208 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLR 136
D D + ++G G+F V A+ + VAIK + K+A +G E+ L K++
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIV + SG LI + V G L + + + D S
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--------------- 119
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVL---LDSDFEAHISDFGLARRIDTSHSHVS 253
+++ V + + YLH L I+HRD+K N+L LD D + ISDFGL++ D V
Sbjct: 120 RLIFQVLDAVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVL 175
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLE 311
+ GT GY+ PE L + +D +S G+ IA + P D + L E
Sbjct: 176 STACGTPGYVAPEVLAQKPYSKA-VDCWSIGV----IAYILLCGYPPFYDENDAKLFE 228
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 44/224 (19%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
IG G FG V++ K G VA+K ++ FRE AE+ LRH NI LG+ A
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENI---LGFIA 65
Query: 149 -------SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+ L+ ++ E+GSL +L+ + ++ E +K+
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT----------------VTVEGMIKLALS 109
Query: 202 VANGLAYLH----GLE-KPII-HRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS-- 253
A+GLA+LH G + KP I HRD+KS N+L+ + I+D GLA R D++ +
Sbjct: 110 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 169
Query: 254 -TQVAGTMGYMPPEYLGGNT-----AATVMLDVYSFGILMIEIA 291
GT YM PE L + + D+Y+ G++ EIA
Sbjct: 170 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 113
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 114 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 84
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 85 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 130
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 131 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 184
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 93
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 94 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 139
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 140 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 193
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 99
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 100 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 145
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 146 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 199
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 99
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 100 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 145
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 146 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 199
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 93
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 94 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 139
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 140 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 193
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 66
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 67 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 110
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 111 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 167
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 168 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 210
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 90
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 91 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 134
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 135 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 192 ANSFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 234
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 89
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 90 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 135
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 136 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 189
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 83
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 84 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 129
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 130 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 183
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 89
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 90 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 135
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 136 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 189
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 44/224 (19%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
IG G FG V++ K G VA+K ++ FRE AE+ LRH NI LG+ A
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENI---LGFIA 90
Query: 149 -------SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+ L+ ++ E+GSL +L+ + ++ E +K+
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT----------------VTVEGMIKLALS 134
Query: 202 VANGLAYLH----GLE-KPII-HRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS-- 253
A+GLA+LH G + KP I HRD+KS N+L+ + I+D GLA R D++ +
Sbjct: 135 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 194
Query: 254 -TQVAGTMGYMPPEYLGGNT-----AATVMLDVYSFGILMIEIA 291
GT YM PE L + + D+Y+ G++ EIA
Sbjct: 195 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 98
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 99 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 144
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 145 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 198
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 107
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 108 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 153
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 154 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 207
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 89
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 90 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 133
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 134 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 90
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 91 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 134
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 135 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 192 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 234
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 110
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 111 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 156
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 157 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 210
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 65
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 66 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 109
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 110 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 166
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 167 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 209
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 85
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 86 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 131
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 132 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 185
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 112
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 113 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 166
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 167 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 113
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 114 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 86
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 87 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 130
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 131 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 187
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 188 ANSFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 230
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 93
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 94 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 139
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 140 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRW 193
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 44/224 (19%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
IG G FG V++ K G VA+K ++ FRE AE+ LRH NI LG+ A
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENI---LGFIA 70
Query: 149 -------SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+ L+ ++ E+GSL +L+ + ++ E +K+
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT----------------VTVEGMIKLALS 114
Query: 202 VANGLAYLH----GLE-KPII-HRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS-- 253
A+GLA+LH G + KP I HRD+KS N+L+ + I+D GLA R D++ +
Sbjct: 115 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 174
Query: 254 -TQVAGTMGYMPPEYLGGNT-----AATVMLDVYSFGILMIEIA 291
GT YM PE L + + D+Y+ G++ EIA
Sbjct: 175 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 114
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 115 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 106
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 107 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 152
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 153 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 206
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 22/222 (9%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKL 135
+D + F+ IG GSFG VYK + VAIK +D ++A + + E+ L +
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC 74
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
I + G +I E++ GS + L PL
Sbjct: 75 DSPYITRYFGSYLKSTKLWIIMEYLGGGS----------------ALDLLKPGPLEETYI 118
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
I+R + GL YLH K IHRDIK++NVLL + ++DFG+A ++ + +
Sbjct: 119 ATILREILKGLDYLHSERK--IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXF 176
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPN 297
V GT +M PE + +A D++S GI IE+A PN
Sbjct: 177 V-GTPFWMAPEVI-KQSAYDFKADIWSLGITAIELAKGEPPN 216
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 44/224 (19%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
IG G FG V++ K G VA+K ++ FRE AE+ LRH NI LG+ A
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENI---LGFIA 67
Query: 149 -------SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+ L+ ++ E+GSL +L+ + ++ E +K+
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT----------------VTVEGMIKLALS 111
Query: 202 VANGLAYLH----GLE-KPII-HRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS-- 253
A+GLA+LH G + KP I HRD+KS N+L+ + I+D GLA R D++ +
Sbjct: 112 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 171
Query: 254 -TQVAGTMGYMPPEYLGGNT-----AATVMLDVYSFGILMIEIA 291
GT YM PE L + + D+Y+ G++ EIA
Sbjct: 172 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 89
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 90 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 133
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 134 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 233
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 89
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 90 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 135
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 136 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRW 189
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 64
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 65 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 108
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 109 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 165
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 166 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 208
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 87
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 88 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 131
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 132 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 189 ANAFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 86
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 87 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 130
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 131 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 187
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 188 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 230
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 104/230 (45%), Gaps = 52/230 (22%)
Query: 88 KIIGDGSFGFVYKAKLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHRNIVKILGY 146
+ +G G +G V++ L G +VA+K +D FRE E+ LRH NI LG+
Sbjct: 14 ECVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNI---LGF 67
Query: 147 CASGLDR-------VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
AS + LI + E+GSL +L Q +L P +++
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFL-------------QRQTLEP---HLALRLA 111
Query: 200 RGVANGLAYLH----GLE-KPII-HRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS 253
A GLA+LH G + KP I HRD KS NVL+ S+ + I+D GLA HS S
Sbjct: 112 VSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA----VMHSQGS 167
Query: 254 TQV-------AGTMGYMPPEYLGGNTAATVM-----LDVYSFGILMIEIA 291
+ GT YM PE L D+++FG+++ EIA
Sbjct: 168 DYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 114
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 115 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 113
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 114 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 92
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 93 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 136
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 137 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 193
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 194 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 236
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 71
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 72 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 115
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 116 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 172
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 173 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 215
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 87
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 88 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 131
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 132 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 231
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 114
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 115 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 87
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 88 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 131
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 132 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 231
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 114
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 115 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 89
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 90 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 133
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 134 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 233
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 114
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 115 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 113
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 114 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 90 IGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVK 142
+G G++G V Y A+L VA+KKL + FQ R +R E+ L L+H N++
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLSR-PFQSLIHARRTYR-ELRLLKHLKHENVIG 83
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+L I +F E +L T D++ + +L S E +V +
Sbjct: 84 LLDVFTPATS---IEDFSEV-----YLVTTLMGADLNNIVKCQAL---SDEHVQFLVYQL 132
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
GL Y+H IIHRD+K SNV ++ D E I DFGLAR+ D T T Y
Sbjct: 133 LRGLKYIHS--AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE----MTGYVATRWY 186
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEI 290
PE + +D++S G +M E+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 113
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 114 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 113
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 114 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 89
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 90 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 133
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 134 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 233
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 113
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 114 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF V A+ L++ AIK L+K +E + E + + +L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 89
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 90 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 133
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 134 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 191 ANXFVGTAQYVSPELLTEKSAXKSS-DLWALGCIIYQLVAGLPP 233
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 50/238 (21%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+F ++G G+FG V KA+ + AIKK+ + + +E+ L L H+ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 142 KILGYCASGLDR----------------VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN 185
+ Y A+ L+R + E+ EN +L +H S+ LN
Sbjct: 66 R---YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIH----------SENLN 112
Query: 186 SLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
W ++ R + L+Y+H + IIHRD+K N+ +D I DFGLA+ +
Sbjct: 113 QQRDEYW----RLFRQILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 246 DTS-------------HSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
S S T GT Y+ E L G +D+YS GI+ E+
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG---FREFRAEMETLGKLR 136
+D + +I+G G V+ A+ L VA+K L D + + FR E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 137 HRNIVKIL----GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
H IV + +G ++ E+V+ +L +H + P++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---------------TEGPMTP 115
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ ++++ L + H + IIHRD+K +N+L+ + + DFG+AR I S + V
Sbjct: 116 KRAIEVIADACQALNFSH--QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSV 173
Query: 253 --STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ V GT Y+ PE G++ DVYS G ++ E+ T P
Sbjct: 174 XQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
R L E + L L N+ V K + ++ +
Sbjct: 88 DVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-------LIYQILR 136
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMP 264
GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T Y
Sbjct: 137 GLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 265 PEYLGGNTAATVMLDVYSFGILMIEIAT 292
PE + +D++S G +M E+ T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG---FREFRAEMETLGKLR 136
+D + +I+G G V+ A+ L VA+K L D + + FR E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 137 HRNIVKIL----GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
H IV + +G ++ E+V+ +L +H + P++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---------------TEGPMTP 115
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ ++++ L + H + IIHRD+K +N+++ + + DFG+AR I S + V
Sbjct: 116 KRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 253 STQVA--GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ A GT Y+ PE G++ DVYS G ++ E+ T P
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 113
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 114 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG---FREFRAEMETLGKLR 136
+D + +I+G G V+ A+ L VA+K L D + + FR E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 137 HRNIVKIL----GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
H IV + +G ++ E+V+ +L +H + P++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---------------TEGPMTP 115
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ ++++ L + H + IIHRD+K +N+++ + + DFG+AR I S + V
Sbjct: 116 KRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 253 STQVA--GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ A GT Y+ PE G++ DVYS G ++ E+ T P
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I D+GLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 88 KIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHRNIVKILG 145
+ +G+G++G V A + VA+K +D K A + E+ L H N+VK G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 146 YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANG 205
+ G + L E+ G L + + D + + L G
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL---------------MAG 116
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVAGTMGYMP 264
+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++ GT+ Y+
Sbjct: 117 VVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 265 PEYLGGNTAATVMLDVYSFGILM 287
PE L +DV+S GI++
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVL 197
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G++G V A + VA+K +D K A + E+ L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 113
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 114 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 88 KIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHRNIVKILG 145
+ +G+G++G V A + VA+K +D K A + E+ L H N+VK G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 146 YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANG 205
+ G + L E+ G L + + D + + L G
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL---------------MAG 117
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVAGTMGYMP 264
+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++ GT+ Y+
Sbjct: 118 VVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 265 PEYLGGNTAATVMLDVYSFGILM 287
PE L +DV+S GI++
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVL 198
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 87 DKIIGDGSFGFVYKAKLS-----SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
DK +G G+FG V K V V I K + + E AE + +L + IV
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+++G C + +L+ E E G L+++L D + +++V
Sbjct: 92 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD---------------KNIIELVHQ 135
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGT 259
V+ G+ YL E +HRD+ + NVLL + A ISDFGL++ R D ++ T
Sbjct: 136 VSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
+ + PE + ++ DV+SFG+LM E
Sbjct: 194 VKWYAPECINYYKFSSKS-DVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 87 DKIIGDGSFGFVYKAKLS-----SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
DK +G G+FG V K V V I K + + E AE + +L + IV
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+++G C + +L+ E E G L+++L D + +++V
Sbjct: 92 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD---------------KNIIELVHQ 135
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGT 259
V+ G+ YL E +HRD+ + NVLL + A ISDFGL++ R D ++ T
Sbjct: 136 VSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
+ + PE + ++ DV+SFG+LM E
Sbjct: 194 VKWYAPECINYYKFSSKS-DVWSFGVLMWE 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
R L E + L L N+ V K + ++ +
Sbjct: 88 DVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-------LIYQILR 136
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMP 264
GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T Y
Sbjct: 137 GLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 265 PEYLGGNTAATVMLDVYSFGILMIEIAT 292
PE + +D++S G +M E+ T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 90 IGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVK 142
+G G++G V Y A+L VA+KKL + FQ R +R E+ L L+H N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSR-PFQSLIHARRTYR-ELRLLKHLKHENVIG 91
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+L I +F E +L T D++ + +L S E +V +
Sbjct: 92 LLDVFTPATS---IEDFSEV-----YLVTTLMGADLNNIVKCQAL---SDEHVQFLVYQL 140
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
GL Y+H IIHRD+K SNV ++ D E I DFGLAR+ D T T Y
Sbjct: 141 LRGLKYIHS--AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWY 194
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEI 290
PE + +D++S G +M E+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 97
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 98 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 143
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 144 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 197
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 36/214 (16%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 94
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 95 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 140
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG--- 258
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR H + ++ G
Sbjct: 141 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVA 191
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
T Y PE + +D++S G +M E+ T
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 83
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 84 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCAKLTDDHVQFLIYQ 129
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 130 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 183
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 36/214 (16%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 94
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 95 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 140
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG--- 258
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR H + ++ G
Sbjct: 141 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVA 191
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
T Y PE + +D++S G +M E+ T
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 83
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 84 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 129
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 130 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 183
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 36/214 (16%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 94
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 95 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 140
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG--- 258
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR H + ++ G
Sbjct: 141 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVA 191
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
T Y PE + +D++S G +M E+ T
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 87 DKIIGDGSFGFVYKAKLS-----SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
DK +G G+FG V K V V I K + + E AE + +L + IV
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+++G C + +L+ E E G L+++L D + +++V
Sbjct: 90 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD---------------KNIIELVHQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGT 259
V+ G+ YL E +HRD+ + NVLL + A ISDFGL++ R D ++ T
Sbjct: 134 VSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 191
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
+ + PE + ++ DV+SFG+LM E
Sbjct: 192 VKWYAPECINYYKFSSKS-DVWSFGVLMWE 220
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 136/310 (43%), Gaps = 56/310 (18%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKL 135
+D + F+ + IG GSFG V+K + VAIK +D ++A + + E+ L +
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGS-LDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
+ K G +I E++ GS LD L PL
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-----------------LLEPGPLDETQ 105
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVST 254
I+R + GL YLH +K IHRDIK++NVLL E ++DFG+A ++ + +
Sbjct: 106 IATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX 163
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA------TQIRP---------NLP 299
V GT +M PE + +A D++S GI IE+A +++ P N P
Sbjct: 164 FV-GTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP 221
Query: 300 VVLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
L+G +++ ++ E V++ +++E +E + + N K
Sbjct: 222 PTLEGN------YSKPLK------EFVEACLNKEPSFRPTAKELLKHKFILRNAKK---- 265
Query: 360 AMSYVVQLLD 369
SY+ +L+D
Sbjct: 266 -TSYLTELID 274
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 93
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 94 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 139
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 140 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 193
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 87 DKIIGDGSFGFVYKAKLS-----SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
DK +G G+FG V K V V I K + + E AE + +L + IV
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+++G C + +L+ E E G L+++L D + +++V
Sbjct: 82 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD---------------KNIIELVHQ 125
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGT 259
V+ G+ YL E +HRD+ + NVLL + A ISDFGL++ R D ++ T
Sbjct: 126 VSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
+ + PE + ++ DV+SFG+LM E
Sbjct: 184 VKWYAPECINYYKFSSKS-DVWSFGVLMWE 212
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 104/238 (43%), Gaps = 29/238 (12%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR-EFRAEMETLGKLR 136
D D + ++G G+F V A+ + VAIK + K A +G E+ L K++
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK 74
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NIV + SG LI + V G L + + + D S
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--------------- 119
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVL---LDSDFEAHISDFGLARRIDTSHSHVS 253
+++ V + + YLH L I+HRD+K N+L LD D + ISDFGL++ D V
Sbjct: 120 RLIFQVLDAVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVL 175
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLE 311
+ GT GY+ PE L + +D +S G+ IA + P D + L E
Sbjct: 176 STACGTPGYVAPEVLAQKPYSKA-VDCWSIGV----IAYILLCGYPPFYDENDAKLFE 228
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG---FREFRAEMETLGKLR 136
+D + +I+G G V+ A+ L VA+K L D + + FR E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 137 HRNIVKILGY----CASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
H IV + +G ++ E+V+ +L +H P++
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------------PMTP 115
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ ++++ L + H + IIHRD+K +N+++ + + DFG+AR I S + V
Sbjct: 116 KRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 253 STQVA--GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ A GT Y+ PE G++ DVYS G ++ E+ T P
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 87 DKIIGDGSFGFVYKAKLS-----SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
DK +G G+FG V K V V I K + + E AE + +L + IV
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+++G C + +L+ E E G L+++L D + +++V
Sbjct: 72 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD---------------KNIIELVHQ 115
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGT 259
V+ G+ YL E +HRD+ + NVLL + A ISDFGL++ R D ++ T
Sbjct: 116 VSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
+ + PE + ++ DV+SFG+LM E
Sbjct: 174 VKWYAPECINYYKFSSKS-DVWSFGVLMWE 202
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 107
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 108 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 153
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 154 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 207
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 87 DKIIGDGSFGFVYKAKLS-----SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
DK +G G+FG V K V V I K + + E AE + +L + IV
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+++G C + +L+ E E G L+++L D + +++V
Sbjct: 76 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD---------------KNIIELVHQ 119
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGT 259
V+ G+ YL E +HRD+ + NVLL + A ISDFGL++ R D ++ T
Sbjct: 120 VSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 177
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
+ + PE + ++ DV+SFG+LM E
Sbjct: 178 VKWYAPECINYYKFSSKS-DVWSFGVLMWE 206
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG---FREFRAEMETLGKLR 136
+D + +I+G G V+ A+ L VA+K L D + + FR E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 137 HRNIVKIL----GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
H IV + +G ++ E+V+ +L +H + P++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---------------TEGPMTP 115
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ ++++ L + H + IIHRD+K +N+++ + + DFG+AR I S + V
Sbjct: 116 KRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 253 STQVA--GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ A GT Y+ PE G++ DVYS G ++ E+ T P
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 106
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 107 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 152
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T T
Sbjct: 153 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRW 206
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 135/309 (43%), Gaps = 56/309 (18%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLR 136
D + F+ + IG GSFG V+K + VAIK +D ++A + + E+ L +
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 78
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGS-LDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
+ K G +I E++ GS LD L PL
Sbjct: 79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-----------------LLEPGPLDETQI 121
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
I+R + GL YLH +K IHRDIK++NVLL E ++DFG+A ++ + +
Sbjct: 122 ATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF 179
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA------TQIRP---------NLPV 300
V GT +M PE + +A D++S GI IE+A +++ P N P
Sbjct: 180 V-GTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP 237
Query: 301 VLDGQEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
L+G +++ ++ E V++ +++E +E + + N K
Sbjct: 238 TLEGN------YSKPLK------EFVEACLNKEPSFRPTAKELLKHKFILRNAKK----- 280
Query: 361 MSYVVQLLD 369
SY+ +L+D
Sbjct: 281 TSYLTELID 289
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 87 DKIIGDGSFGFVYKAKLS-----SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
DK +G G+FG V K V V I K + + E AE + +L + IV
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+++G C + +L+ E E G L+++L D + +++V
Sbjct: 70 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD---------------KNIIELVHQ 113
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGT 259
V+ G+ YL E +HRD+ + NVLL + A ISDFGL++ R D ++ T
Sbjct: 114 VSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 171
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
+ + PE + ++ DV+SFG+LM E
Sbjct: 172 VKWYAPECINYYKFSSKS-DVWSFGVLMWE 200
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 90 IGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVK 142
+G G++G V Y A+L VA+KKL + FQ R +R E+ L L+H N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSR-PFQSLIHARRTYR-ELRLLKHLKHENVIG 91
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+L I +F E +L T D++ + +L S E +V +
Sbjct: 92 LLDVFTPATS---IEDFSEV-----YLVTTLMGADLNNIVKSQAL---SDEHVQFLVYQL 140
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
GL Y+H IIHRD+K SNV ++ D E I DFGLAR+ D T T Y
Sbjct: 141 LRGLKYIHS--AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWY 194
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEI 290
PE + +D++S G +M E+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 106/248 (42%), Gaps = 38/248 (15%)
Query: 62 SASFDPSLSQISMSELIDAT------DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKL 114
+AS P + + ID + D F + +G G+ VY+ K + A+K L
Sbjct: 27 TASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL 86
Query: 115 DKDAFQGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDT-- 172
K + + R E+ L +L H NI+K+ + + L+ E V G L + +
Sbjct: 87 KKTVDK--KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY 144
Query: 173 -SRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDS- 230
S D D KQ + +AYLH E I+HRD+K N+L +
Sbjct: 145 YSERDAADAVKQ------------------ILEAVAYLH--ENGIVHRDLKPENLLYATP 184
Query: 231 --DFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMI 288
D I+DFGL++ ++ H + V GT GY PE L G A +D++S GI+
Sbjct: 185 APDAPLKIADFGLSKIVE--HQVLMKTVCGTPGYCAPEILRG-CAYGPEVDMWSVGIITY 241
Query: 289 EIATQIRP 296
+ P
Sbjct: 242 ILLCGFEP 249
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 36/214 (16%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG--- 258
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR H ++AG
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVA 184
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
T Y PE + +D++S G +M E+ T
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 36/214 (16%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG--- 258
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR H ++AG
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVA 184
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
T Y PE + +D++S G +M E+ T
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA-----EMETLGKL 135
++F KI+G+GSF A+ L++ AIK L+K +E + E + + +L
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 87
Query: 136 RHRNIVKILGYCASGLDRVLIY--EFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
H VK+ Y D L + + +NG L +++ D+ C
Sbjct: 88 DHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET---------C----- 131
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV- 252
TR + + L YLHG K IIHRD+K N+LL+ D I+DFG A+ +
Sbjct: 132 TRFYTAE-IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT Y+ PE L +A D+++ G ++ ++ + P
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPP 231
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 90 IGDGSFGFVYKAKL------SSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVK 142
+G+ FG VYK L VAIK L A RE FR E +L+H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDV---DGSKQLNSLCPLSWETRVKIV 199
+LG +I+ + +G L ++L S + DV D + + S L V +V
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA--LEPPDFVHLV 151
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
+A G+ YL ++H+D+ + NVL+ ISD GL R + + + ++ G
Sbjct: 152 AQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY---KLLGN 206
Query: 260 ----MGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ +M PE + ++ D++S+G+++ E+
Sbjct: 207 SLLPIRWMAPEAIMYGK-FSIDSDIWSYGVVLWEV 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 36/214 (16%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 83
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 84 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 129
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG--- 258
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR H ++AG
Sbjct: 130 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVA 180
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
T Y PE + +D++S G +M E+ T
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 110
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 111 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 156
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T
Sbjct: 157 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGYVATRW 210
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA---EMETLGKLR 136
+D + +++G GSFG V K +G A+K + K + + + E++ L +L
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NI+K+ + L+ E G L + R +VD ++
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-------------- 136
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDS---DFEAHISDFGLARRIDTSHSHVS 253
I+R V +G+ Y+H + I+HRD+K N+LL+S D I DFGL+ + S
Sbjct: 137 -IIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 193
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT Y+ PE L G DV+S G+++
Sbjct: 194 K--IGTAYYIAPEVLHGTYDEKC--DVWSTGVIL 223
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 24/226 (10%)
Query: 75 SELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETL 132
+ + D + F+ + IG GSFG V+K + VAIK +D ++A + + E+ L
Sbjct: 16 NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVL 75
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGS-LDQWLHDTSRNDDVDGSKQLNSLCPLS 191
+ + K G G +I E++ GS LD L P
Sbjct: 76 SQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALD-----------------LLRAGPFD 118
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSH 251
+++ + GL YLH +K IHRDIK++NVLL + ++DFG+A ++ +
Sbjct: 119 EFQIATMLKEILKGLDYLHSEKK--IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 176
Query: 252 VSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPN 297
+T V GT +M PE + +A D++S GI IE+A PN
Sbjct: 177 RNTFV-GTPFWMAPEVI-QQSAYDSKADIWSLGITAIELAKGEPPN 220
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD-KDAFQGFREFRAEMETLGKLRHR 138
+++ + +G+G+ G V A + VA+K +D K A + E+ L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
N+VK G+ G + L E+ G L + + D + + L
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL----------- 113
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSHVSTQVA 257
G+ YLHG+ I HRDIK N+LLD ISDFGLA + + ++
Sbjct: 114 ----MAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT+ Y+ PE L +DV+S GI++
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 50/237 (21%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
+F ++G G+FG V KA+ + AIKK+ + + +E+ L L H+ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 142 KILGYCASGLDR----------------VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN 185
+ Y A+ L+R + E+ EN +L +H S+ LN
Sbjct: 66 R---YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIH----------SENLN 112
Query: 186 SLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
W ++ R + L+Y+H + IIHR++K N+ +D I DFGLA+ +
Sbjct: 113 QQRDEYW----RLFRQILEALSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNV 166
Query: 246 DTS-------------HSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
S S T GT Y+ E L G +D YS GI+ E
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQG---FREFRAEMETLGKLR 136
+D + +I+G G V+ A+ L VA+K L D + + FR E + L
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 137 HRNIVKIL----GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
H IV + +G ++ E+V+ +L +H P++
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------------PMTP 132
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
+ ++++ L + H + IIHRD+K +N+++ + + DFG+AR I S + V
Sbjct: 133 KRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 190
Query: 253 STQVA--GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ A GT Y+ PE G++ DVYS G ++ E+ T P
Sbjct: 191 TQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 90 IGDGSFGFVYKAKL------SSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVK 142
+G+ FG VYK L VAIK L A RE FR E +L+H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDV---DGSKQLNSLCPLSWETRVKIV 199
+LG +I+ + +G L ++L S + DV D + + S L V +V
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA--LEPPDFVHLV 134
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
+A G+ YL ++H+D+ + NVL+ ISD GL R + + + ++ G
Sbjct: 135 AQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY---KLLGN 189
Query: 260 ----MGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ +M PE + ++ D++S+G+++ E+
Sbjct: 190 SLLPIRWMAPEAIMYGK-FSIDSDIWSYGVVLWEV 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 87 DKIIGDGSFGFVYKA-----KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
DK +G G+FG V K K+ V V I K + + E AE + +L + IV
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+++G C + +L+ E E G L+++L D + +++V
Sbjct: 434 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD---------------KNIIELVHQ 477
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGT 259
V+ G+ YL E +HRD+ + NVLL + A ISDFGL++ R D ++ T
Sbjct: 478 VSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
+ + PE + ++ DV+SFG+LM E
Sbjct: 536 VKWYAPECINYYKFSSKS-DVWSFGVLMWE 564
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
R L E + L L N+ V K + ++ +
Sbjct: 88 DVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-------LIYQILR 136
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMP 264
GL Y+H + IIHRD+K SN+ ++ D E I DFGL R D T T Y
Sbjct: 137 GLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE----MTGYVATRWYRA 190
Query: 265 PEYLGGNTAATVMLDVYSFGILMIEIAT 292
PE + +D++S G +M E+ T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 23/237 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSS----GVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
A ++ ++I+G+G FG VY+ ++ + VA+K KD +E F +E +
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
L H +IVK++G +++ E G L +L RN NSL L T
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYL---ERNK--------NSLKVL---T 110
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVST 254
V + +AYL + +HRDI N+L+ S + DFGL+R I+ + ++
Sbjct: 111 LVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 168
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLE 311
+ +M PE + T DV+ F + M EI + + + + +G+LE
Sbjct: 169 VTRLPIKWMSPESINFRRFTTAS-DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE 224
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 87 DKIIGDGSFGFVYKA-----KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
DK +G G+FG V K K+ V V I K + + E AE + +L + IV
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+++G C + +L+ E E G L+++L D + +++V
Sbjct: 435 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD---------------KNIIELVHQ 478
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGT 259
V+ G+ YL E +HRD+ + NVLL + A ISDFGL++ R D ++ T
Sbjct: 479 VSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 536
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
+ + PE + ++ DV+SFG+LM E
Sbjct: 537 VKWYAPECINYYKFSSKS-DVWSFGVLMWE 565
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I FGLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 23/237 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSS----GVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
A ++ ++I+G+G FG VY+ ++ + VA+K KD +E F +E +
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
L H +IVK++G +I E G L +L RN NSL L T
Sbjct: 82 LDHPHIVKLIGIIEEE-PTWIIMELYPYGELGHYLE---RNK--------NSLKVL---T 126
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVST 254
V + +AYL + +HRDI N+L+ S + DFGL+R I+ + ++
Sbjct: 127 LVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 184
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLE 311
+ +M PE + T DV+ F + M EI + + + + +G+LE
Sbjct: 185 VTRLPIKWMSPESINFRRFTTAS-DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE 240
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 127/266 (47%), Gaps = 35/266 (13%)
Query: 33 YKPPTYRTRAVNRPQPNRCSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKI-IG 91
Y P R + ++P+P ++F+S DP ++ +L DN I +G
Sbjct: 292 YTPEPARITSPDKPRPMP----MDTSVFESPFSDPE--ELKDKKLFLKRDNLLIADIELG 345
Query: 92 DGSFGFV----YKAKLSSGVTVAIKKLDKDAFQG-FREFRAEMETLGKLRHRNIVKILGY 146
G+FG V Y+ + + VAIK L + + E E + + +L + IV+++G
Sbjct: 346 CGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV 404
Query: 147 C-ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANG 205
C A L +L+ E G L ++L + +++ P+S +++ V+ G
Sbjct: 405 CQAEAL--MLVMEMAGGGPLHKFL--VGKREEI----------PVS--NVAELLHQVSMG 448
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG--TMGYM 263
+ YL EK +HR++ + NVLL + A ISDFGL++ + S+ + + AG + +
Sbjct: 449 MKYLE--EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 506
Query: 264 PPEYLGGNTAATVMLDVYSFGILMIE 289
PE + ++ DV+S+G+ M E
Sbjct: 507 APECINFRKFSSRS-DVWSYGVTMWE 531
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 87 DKIIGDGSFGFVYKAKLS-----SGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
DK +G G+FG V K V V I K + + E AE + +L + IV
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+++G C + +L+ E E G L+++L D + +++V
Sbjct: 76 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD---------------KNIIELVHQ 119
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGT 259
V+ G+ YL E +HRD+ + NVLL + A ISDFGL++ R D + T
Sbjct: 120 VSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP 177
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
+ + PE + ++ DV+SFG+LM E
Sbjct: 178 VKWYAPECINYYKFSSKS-DVWSFGVLMWE 206
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA---EMETLGKLR 136
+D + +++G GSFG V K +G A+K + K + + + E++ L +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NI+K+ + L+ E G L + R +VD ++
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-------------- 130
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDS---DFEAHISDFGLARRIDTSHSHVS 253
I+R V +G+ Y+H + I+HRD+K N+LL+S D I DFGL+ + S
Sbjct: 131 -IIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 187
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT Y+ PE L G DV+S G+++
Sbjct: 188 K--IGTAYYIAPEVLHGTYDEKC--DVWSTGVIL 217
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 23/237 (9%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLSS----GVTVAIKKLDKDAFQGFRE-FRAEMETLGK 134
A ++ ++I+G+G FG VY+ ++ + VA+K KD +E F +E +
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
L H +IVK++G +++ E G L +L RN NSL L T
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLE---RNK--------NSLKVL---T 114
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVST 254
V + +AYL + +HRDI N+L+ S + DFGL+R I+ + ++
Sbjct: 115 LVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 172
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLE 311
+ +M PE + T DV+ F + M EI + + + + +G+LE
Sbjct: 173 VTRLPIKWMSPESINFRRFTTAS-DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE 228
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I D GLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I D GLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA---EMETLGKLR 136
+D + +++G GSFG V K +G A+K + K + + + E++ L +L
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NI+K+ + L+ E G L + R +VD ++
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-------------- 153
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDS---DFEAHISDFGLARRIDTSHSHVS 253
I+R V +G+ Y+H + I+HRD+K N+LL+S D I DFGL+ + S
Sbjct: 154 -IIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 210
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT Y+ PE L G DV+S G+++
Sbjct: 211 K--IGTAYYIAPEVLHGTYDEKC--DVWSTGVIL 240
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 107
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 108 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 153
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DFGLAR D T
Sbjct: 154 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGXVATRW 207
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 119/285 (41%), Gaps = 37/285 (12%)
Query: 90 IGDGSFGFVYKAKLSSGVT-VAIKKLDKDAFQGFR-EFRAEMETLGKLRHRNIVKILGYC 147
IG G+FG V+ +L + T VA+K + + +F E L + H NIV+++G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
++ E V+ G +L +G++ L +T +++V A G+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLR-------TEGAR-------LRVKTLLQMVGDAAAGME 227
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR-RIDTSHSHVSTQVAGTMGYMPPE 266
YL K IHRD+ + N L+ ISDFG++R D ++ + + PE
Sbjct: 228 YLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPE 285
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L ++ DV+SFGIL+ E + +G + + +E
Sbjct: 286 ALNYGRYSSES-DVWSFGILLWETFS--------------LGASPYPNLSNQQTREFVEK 330
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EL V FR+ C + +RP+ S + Q L +
Sbjct: 331 GGRLPCPELCPDAV---FRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G+ VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I D GLAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA---EMETLGKLR 136
+D + +++G GSFG V K +G A+K + K + + + E++ L +L
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NI+K+ + L+ E G L + R +VD ++
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-------------- 154
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDS---DFEAHISDFGLARRIDTSHSHVS 253
I+R V +G+ Y+H + I+HRD+K N+LL+S D I DFGL+ + S
Sbjct: 155 -IIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 211
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT Y+ PE L G DV+S G+++
Sbjct: 212 K--IGTAYYIAPEVLHGTYDEKC--DVWSTGVIL 241
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 31/234 (13%)
Query: 67 PSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKL----DKDAFQG 121
P +S + + D + +G+G++G VYKA + TVAIK++ +++ G
Sbjct: 19 PGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPG 78
Query: 122 FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGS 181
R E+ L +L+HRNI+++ LI+E+ EN L +++ +N DV
Sbjct: 79 -TAIR-EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM---DKNPDV--- 129
Query: 182 KQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLD-SDFEA----HI 236
S + + NG+ + H + +HRD+K N+LL SD I
Sbjct: 130 ---------SMRVIKSFLYQLINGVNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKI 178
Query: 237 SDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
DFGLAR + ++ T+ Y PPE L G+ + +D++S + E+
Sbjct: 179 GDFGLARAFGIPIRQFTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEM 231
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 88 KIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVK 142
+ IG+G FG V Y + + + VAIK RE F E T+ + H +IVK
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
++G +I E G L +L R +D L SL +++ +
Sbjct: 73 LIGVITEN-PVWIIMELCTLGELRSFLQ--VRKYSLD----LASLILYAYQ--------L 117
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ LAYL K +HRDI + NVL+ S+ + DFGL+R ++ S + +++ + +
Sbjct: 118 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 175
Query: 263 MPPEYLGGN--TAATVMLDVYSFGILMIEI 290
M PE + T+A+ DV+ FG+ M EI
Sbjct: 176 MAPESINFRRFTSAS---DVWMFGVCMWEI 202
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 88 KIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVK 142
+ IG+G FG V Y + + + VAIK RE F E T+ + H +IVK
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
++G +I E G L +L R +D L SL +++ +
Sbjct: 76 LIGVITEN-PVWIIMELCTLGELRSFLQ--VRKYSLD----LASLILYAYQ--------L 120
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ LAYL K +HRDI + NVL+ S+ + DFGL+R ++ S + +++ + +
Sbjct: 121 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 263 MPPEYLGGN--TAATVMLDVYSFGILMIEI 290
M PE + T+A+ DV+ FG+ M EI
Sbjct: 179 MAPESINFRRFTSAS---DVWMFGVCMWEI 205
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 88 KIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVK 142
+ IG+G FG V Y + + + VAIK RE F E T+ + H +IVK
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
++G +I E G L +L R +D L SL +++ +
Sbjct: 76 LIGVITEN-PVWIIMELCTLGELRSFLQ--VRKYSLD----LASLILYAYQ--------L 120
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ LAYL K +HRDI + NVL+ S+ + DFGL+R ++ S + +++ + +
Sbjct: 121 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 263 MPPEYLGGN--TAATVMLDVYSFGILMIEI 290
M PE + T+A+ DV+ FG+ M EI
Sbjct: 179 MAPESINFRRFTSAS---DVWMFGVCMWEI 205
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 88 KIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVK 142
+ IG+G FG V Y + + + VAIK RE F E T+ + H +IVK
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
++G +I E G L +L R +D L SL +++ +
Sbjct: 78 LIGVITEN-PVWIIMELCTLGELRSFLQ--VRKYSLD----LASLILYAYQ--------L 122
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ LAYL K +HRDI + NVL+ S+ + DFGL+R ++ S + +++ + +
Sbjct: 123 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 180
Query: 263 MPPEYLGGN--TAATVMLDVYSFGILMIEI 290
M PE + T+A+ DV+ FG+ M EI
Sbjct: 181 MAPESINFRRFTSAS---DVWMFGVCMWEI 207
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 90 IGDGSFGFVYKAK-LSSGVTVAIKKL---DKDAFQGFREFRAEMETLGKLRHRNIVKILG 145
IG+GS+G V+K + +G VAIKK + D R E+ L +L+H N+V +L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALR-EIRMLKQLKHPNLVNLLE 69
Query: 146 YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANG 205
L++E+ ++ L H+ R + S+ +W+T
Sbjct: 70 VFRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVKSI---TWQT--------LQA 114
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPP 265
+ + H + IHRD+K N+L+ + DFG AR + + +VA T Y P
Sbjct: 115 VNFCH--KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSP 171
Query: 266 EYLGGNTAATVMLDVYSFGILMIEIATQI 294
E L G+T +DV++ G + E+ + +
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLSGV 200
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 88 KIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVK 142
+ IG+G FG V Y + + + VAIK RE F E T+ + H +IVK
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
++G +I E G L +L R +D L SL +++ +
Sbjct: 104 LIGVITEN-PVWIIMELCTLGELRSFLQ--VRKYSLD----LASLILYAYQ--------L 148
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ LAYL K +HRDI + NVL+ S+ + DFGL+R ++ S + +++ + +
Sbjct: 149 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 206
Query: 263 MPPEYLGGN--TAATVMLDVYSFGILMIEI 290
M PE + T+A+ DV+ FG+ M EI
Sbjct: 207 MAPESINFRRFTSAS---DVWMFGVCMWEI 233
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 37/231 (16%)
Query: 86 TDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQ-GFREFRAEMETLGKLRHRNIVKIL 144
++KI+G GS G V G VA+K++ D E + E+ H N+++
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD---HPNVIRY- 74
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
YC+ DR L Y +E +L+ S+N + K P+S ++R +A+
Sbjct: 75 -YCSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS------LLRQIAS 126
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLLD--SDFEAH-----------ISDFGLARRIDTSHSH 251
G+A+LH L+ IIHRD+K N+L+ S F A ISDFGL +++D+ S
Sbjct: 127 GVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 252 VSTQV---AGTMGYMPPEYLGGNTA------ATVMLDVYSFGILMIEIATQ 293
T + +GT G+ PE L + T +D++S G + I ++
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 86 TDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQ-GFREFRAEMETLGKLRHRNIVKIL 144
++KI+G GS G V G VA+K++ D E + E+ H N+++
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD---HPNVIRY- 92
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
YC+ DR L Y +E +L+ S+N + K P+S ++R +A+
Sbjct: 93 -YCSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS------LLRQIAS 144
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLL--DSDFEAH-----------ISDFGLARRIDTSHSH 251
G+A+LH L+ IIHRD+K N+L+ S F A ISDFGL +++D+
Sbjct: 145 GVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 252 VSTQV---AGTMGYMPPEYLGGNTAA--TVMLDVYSFGILMIEIATQ 293
+ +GT G+ PE L +T T +D++S G + I ++
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 88 KIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVK 142
+ IG+G FG V Y + + + VAIK RE F E T+ + H +IVK
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
++G +I E G L +L R +D L SL +++ +
Sbjct: 81 LIGVITEN-PVWIIMELCTLGELRSFLQ--VRKYSLD----LASLILYAYQ--------L 125
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ LAYL K +HRDI + NVL+ S+ + DFGL+R ++ S + +++ + +
Sbjct: 126 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 183
Query: 263 MPPEYLGGN--TAATVMLDVYSFGILMIEI 290
M PE + T+A+ DV+ FG+ M EI
Sbjct: 184 MAPESINFRRFTSAS---DVWMFGVCMWEI 210
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 88 KIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVK 142
+ IG+G FG V Y + + + VAIK RE F E T+ + H +IVK
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
++G +I E G L +L R +D L SL +++ +
Sbjct: 79 LIGVITEN-PVWIIMELCTLGELRSFLQ--VRKYSLD----LASLILYAYQ--------L 123
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ LAYL K +HRDI + NVL+ S+ + DFGL+R ++ S + +++ + +
Sbjct: 124 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 181
Query: 263 MPPEYLGGN--TAATVMLDVYSFGILMIEI 290
M PE + T+A+ DV+ FG+ M EI
Sbjct: 182 MAPESINFRRFTSAS---DVWMFGVCMWEI 208
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 88 KIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLR-HRNIVKILG 145
+++ +G F FVY+A+ + SG A+K+L + + R E+ + KL H NIV+
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 146 YCASGLDRVLIYEFVENGSLD-QWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
+ G E + G + L + + V+ K++ S PLS +T +KI
Sbjct: 94 AASIG------KEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCR 147
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
+ ++H + PIIHRD+K N+LL + + DFG A I
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 33/227 (14%)
Query: 86 TDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQ-GFREFRAEMETLGKLRHRNIVKIL 144
++KI+G GS G V G VA+K++ D E + E+ H N+++
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD---HPNVIRY- 92
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
YC+ DR L Y +E +L+ S+N + K P+S ++R +A+
Sbjct: 93 -YCSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS------LLRQIAS 144
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLL--DSDFEAH-----------ISDFGLARRIDTSHSH 251
G+A+LH L+ IIHRD+K N+L+ S F A ISDFGL +++D+
Sbjct: 145 GVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 252 VSTQV---AGTMGYMPPEYLGGNTAA--TVMLDVYSFGILMIEIATQ 293
+ +GT G+ PE L +T T +D++S G + I ++
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 36/221 (16%)
Query: 82 DNFSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQGFRE------FRAEMETL 132
D + K +G G+ G V ++ K V + I K A RE E+E L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN-SLCPLS 191
KL H I+KI + D ++ E +E G L D V G+K+L + C L
Sbjct: 69 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---------FDKVVGNKRLKEATCKLY 118
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGLARRIDTS 248
+ + V+ YLH E IIHRD+K NVLL S E I+DFG ++ +
Sbjct: 119 FYQMLLAVQ-------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--G 167
Query: 249 HSHVSTQVAGTMGYMPPEYL--GGNTAATVMLDVYSFGILM 287
+ + + GT Y+ PE L G +D +S G+++
Sbjct: 168 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 208
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKL-SSGVTVAIKKLDKDAFQ---GFREFRAEMETLGKLRH 137
D F +++G G FG V+ ++ ++G A KKL+K + G++ E + L K+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
R IV + + D L+ + G + +++ ++D G ++ + +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRA---------IF 293
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
+ +GL +LH ++ II+RD+K NVLLD D ISD GLA + + + A
Sbjct: 294 YTAQIVSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYA 350
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT G+M PE L G +D ++ G+ + E+
Sbjct: 351 GTPGFMAPELLLGEE-YDFSVDYFALGVTLYEM 382
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 30/211 (14%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGF----REFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G VA+KKL + FQ R +R E+ L ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSL--CPLSWETRVK-IVRG 201
F SL+++ +D + G+ LN++ C + V+ ++
Sbjct: 88 DV------------FTPARSLEEF-NDVYLVTHLMGA-DLNNIVKCQKLTDDHVQFLIYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL Y+H + IIHRD+K SN+ ++ D E I DF LAR D T T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDE----MTGYVATRW 187
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
Y PE + +D++S G +M E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 36/221 (16%)
Query: 82 DNFSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQGFRE------FRAEMETL 132
D + K +G G+ G V ++ K V + I K A RE E+E L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN-SLCPLS 191
KL H I+KI + D ++ E +E G L D V G+K+L + C L
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---------FDKVVGNKRLKEATCKLY 119
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGLARRIDTS 248
+ + V+ YLH E IIHRD+K NVLL S E I+DFG ++ +
Sbjct: 120 FYQMLLAVQ-------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--G 168
Query: 249 HSHVSTQVAGTMGYMPPEYL--GGNTAATVMLDVYSFGILM 287
+ + + GT Y+ PE L G +D +S G+++
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 26/218 (11%)
Query: 83 NFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRHR 138
+F + +G GSFG V+ + +G A+K L K+ ++ E L + H
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
I+++ G +I +++E G L L + R + +C
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC---------- 116
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
L YLH K II+RD+K N+LLD + I+DFG A+ + V+ + G
Sbjct: 117 -----LALEYLHS--KDIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCG 165
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
T Y+ PE + +D +SFGIL+ E+ P
Sbjct: 166 TPDYIAPEVV-STKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 36/221 (16%)
Query: 82 DNFSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQGFRE------FRAEMETL 132
D + K +G G+ G V ++ K V + I K A RE E+E L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN-SLCPLS 191
KL H I+KI + D ++ E +E G L D V G+K+L + C L
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---------FDKVVGNKRLKEATCKLY 119
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGLARRIDTS 248
+ + V+ YLH E IIHRD+K NVLL S E I+DFG ++ +
Sbjct: 120 FYQMLLAVQ-------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--G 168
Query: 249 HSHVSTQVAGTMGYMPPEYL--GGNTAATVMLDVYSFGILM 287
+ + + GT Y+ PE L G +D +S G+++
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 123/298 (41%), Gaps = 51/298 (17%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLSSG-VTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
NF T + + G ++K + + V + K+ + + R+F E L H N++
Sbjct: 13 NFLTK--LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 142 KILGYCAS--GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
+LG C S LI ++ GSL LH+ + N VD S+ VK
Sbjct: 71 PVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGT-NFVVDQSQA------------VKFA 117
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
+A G+A+LH LE I + S +V++D D A RI + S Q G
Sbjct: 118 LDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTA---------RISMADVKFSFQSPGR 168
Query: 260 M---GYMPPEYLGGNTAATVM--LDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWAR 314
M ++ PE L T D++SF +L+ E+ T+ P L E+G+
Sbjct: 169 MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF--ADLSNMEIGM----- 221
Query: 315 TMEARNKEIEMVDSNISREELSEAGVREYF-RIACMCTNEKSRERPAMSYVVQLLDEL 371
+E + I G+ + ++ +C NE +RP +V +L+++
Sbjct: 222 -----KVALEGLRPTIP------PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 28/227 (12%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNI 140
+F + +G G FG V++AK AIK++ + RE E++ L KL H I
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLH---DTSRNDDVDGSKQLNSLCPLSWETR-- 195
V+ Y + L++ E ++ S +L+ R +++ +N C + R
Sbjct: 66 VR---YFNAWLEKNTT-EKLQPSSPKVYLYIQMQLCRKENL--KDWMNGRCTIEERERSV 119
Query: 196 -VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS- 253
+ I +A + +LH K ++HRD+K SN+ D + DFGL +D +
Sbjct: 120 CLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 254 ----------TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
T GT YM PE + GN+ + +D++S G+++ E+
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSH-KVDIFSLGLILFEL 223
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 36/221 (16%)
Query: 82 DNFSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQGFRE------FRAEMETL 132
D + K +G G+ G V ++ K V + I K A RE E+E L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN-SLCPLS 191
KL H I+KI + D ++ E +E G L D V G+K+L + C L
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---------FDKVVGNKRLKEATCKLY 119
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGLARRIDTS 248
+ + V+ YLH E IIHRD+K NVLL S E I+DFG ++ +
Sbjct: 120 FYQMLLAVQ-------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--G 168
Query: 249 HSHVSTQVAGTMGYMPPEYL--GGNTAATVMLDVYSFGILM 287
+ + + GT Y+ PE L G +D +S G+++
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 26/217 (11%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEM---ETLGKL 135
DNF +++G GSFG V A++ +G A+K L KD + M L
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 136 RHRNIVKILGYCASGLDRVL-IYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
R+ + L C DR+ + EFV G L + + R D E
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD----------------EA 124
Query: 195 RVKIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS 253
R + + + L +LH +K II+RD+K NVLLD + ++DFG+ + + +
Sbjct: 125 RARFYAAEIISALMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKE-GICNGVTT 181
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT Y+ PE L +D ++ G+L+ E+
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPA-VDWWAMGVLLYEM 217
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 118/285 (41%), Gaps = 37/285 (12%)
Query: 90 IGDGSFGFVYKAKLSSGVT-VAIKKLDKDAFQGFR-EFRAEMETLGKLRHRNIVKILGYC 147
IG G+FG V+ +L + T VA+K + + +F E L + H NIV+++G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 148 ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLA 207
++ E V+ G +L +G++ L +T +++V A G+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLR-------TEGAR-------LRVKTLLQMVGDAAAGME 227
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR-RIDTSHSHVSTQVAGTMGYMPPE 266
YL K IHRD+ + N L+ ISDFG++R D + + + PE
Sbjct: 228 YLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE 285
Query: 267 YLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTMEARNKEIEMV 326
L ++ DV+SFGIL+ E + +G + + +E
Sbjct: 286 ALNYGRYSSES-DVWSFGILLWETFS--------------LGASPYPNLSNQQTREFVEK 330
Query: 327 DSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDEL 371
+ EL V FR+ C + +RP+ S + Q L +
Sbjct: 331 GGRLPCPELCPDAV---FRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 113/281 (40%), Gaps = 47/281 (16%)
Query: 90 IGDGSFGFV----YKAKLSSGVTVAIKKLDKDAF---QGFREFRAEMETLGKLRHRNIVK 142
+GDGSFG V + A V+VA+K L D + +F E+ + L HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+ G + + ++ E GSL R G L +L + V
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSL------LDRLRKHQGHFLLGTLS--------RYAVQV 120
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM-- 260
A G+ YL K IHRD+ + N+LL + I DFGL R + + H Q +
Sbjct: 121 AEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF 178
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQE--VGLLEWARTMEA 318
+ PE L T + D + FG+ + E+ T GQE +GL
Sbjct: 179 AWCAPESLKTRTFSHAS-DTWMFGVTLWEMFTY----------GQEPWIGL--------N 219
Query: 319 RNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
++ + +D R E ++ + + C K +RP
Sbjct: 220 GSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 36/221 (16%)
Query: 82 DNFSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQGFRE------FRAEMETL 132
D + K +G G+ G V ++ K V + I K A RE E+E L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN-SLCPLS 191
KL H I+KI + D ++ E +E G L D V G+K+L + C L
Sbjct: 76 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---------FDKVVGNKRLKEATCKLY 125
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGLARRIDTS 248
+ + V+ YLH E IIHRD+K NVLL S E I+DFG ++ +
Sbjct: 126 FYQMLLAVQ-------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--G 174
Query: 249 HSHVSTQVAGTMGYMPPEYL--GGNTAATVMLDVYSFGILM 287
+ + + GT Y+ PE L G +D +S G+++
Sbjct: 175 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+K+L R+F+ E++ L L IVK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 145 G--YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G Y + L+ E++ +G L +L +D S+ L +
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQ--RHRARLDASRLL------------LYSSQI 120
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGTM 260
G+ YL + +HRD+ + N+L++S+ I+DFGLA+ +D V +
Sbjct: 121 CKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI 178
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ PE L N + DV+SFG+++ E+ T
Sbjct: 179 FWYAPESLSDNIFSR-QSDVWSFGVVLYELFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 113/282 (40%), Gaps = 47/282 (16%)
Query: 90 IGDGSFGFV----YKAKLSSGVTVAIKKLDKDAF---QGFREFRAEMETLGKLRHRNIVK 142
+GDGSFG V + A V+VA+K L D + +F E+ + L HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+ G + + ++ E GSL R G L +L + V
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSL------LDRLRKHQGHFLLGTLS--------RYAVQV 120
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM-- 260
A G+ YL K IHRD+ + N+LL + I DFGL R + + H Q +
Sbjct: 121 AEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 178
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQE--VGLLEWARTMEA 318
+ PE L T + D + FG+ + E+ T GQE +GL
Sbjct: 179 AWCAPESLKTRTFSHAS-DTWMFGVTLWEMFTY----------GQEPWIGL--------N 219
Query: 319 RNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
++ + +D R E ++ + + C K +RP
Sbjct: 220 GSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKL-SSGVTVAIKKLDKDAFQ---GFREFRAEMETLGKLRH 137
D F +++G G FG V+ ++ ++G A KKL+K + G++ E + L K+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
R IV + + D L+ + G + +++ ++D G ++ + +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRA---------IF 293
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
+ +GL +LH ++ II+RD+K NVLLD D ISD GLA + + + A
Sbjct: 294 YTAQIVSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYA 350
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT G+M PE L G +D ++ G+ + E+
Sbjct: 351 GTPGFMAPELLLGEE-YDFSVDYFALGVTLYEM 382
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKL-SSGVTVAIKKLDKDAFQ---GFREFRAEMETLGKLRH 137
D F +++G G FG V+ ++ ++G A KKL+K + G++ E + L K+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
R IV + + D L+ + G + +++ ++D G ++ + +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRA---------IF 293
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
+ +GL +LH ++ II+RD+K NVLLD D ISD GLA + + + A
Sbjct: 294 YTAQIVSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYA 350
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT G+M PE L G +D ++ G+ + E+
Sbjct: 351 GTPGFMAPELLLGEE-YDFSVDYFALGVTLYEM 382
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKL-SSGVTVAIKKLDKDAFQ---GFREFRAEMETLGKLRH 137
D F +++G G FG V+ ++ ++G A KKL+K + G++ E + L K+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
R IV + + D L+ + G + +++ ++D G ++ + +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRA---------IF 293
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
+ +GL +LH ++ II+RD+K NVLLD D ISD GLA + + + A
Sbjct: 294 YTAQIVSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYA 350
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT G+M PE L G +D ++ G+ + E+
Sbjct: 351 GTPGFMAPELLLGEE-YDFSVDYFALGVTLYEM 382
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 88 KIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVK 142
+ IG+G FG V Y + + + VAIK RE F E T+ + H +IVK
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
++G +I E G L +L R +D L SL +++ +
Sbjct: 76 LIGVITEN-PVWIIMELCTLGELRSFLQ--VRKFSLD----LASLILYAYQ--------L 120
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ LAYL K +HRDI + NVL+ S+ + DFGL+R ++ S +++ + +
Sbjct: 121 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKW 178
Query: 263 MPPEYLGGN--TAATVMLDVYSFGILMIEI 290
M PE + T+A+ DV+ FG+ M EI
Sbjct: 179 MAPESINFRRFTSAS---DVWMFGVCMWEI 205
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 113/281 (40%), Gaps = 47/281 (16%)
Query: 90 IGDGSFGFV----YKAKLSSGVTVAIKKLDKDAF---QGFREFRAEMETLGKLRHRNIVK 142
+GDGSFG V + A V+VA+K L D + +F E+ + L HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+ G + + ++ E GSL R G L +L + V
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSL------LDRLRKHQGHFLLGTLS--------RYAVQV 120
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM-- 260
A G+ YL K IHRD+ + N+LL + I DFGL R + + H Q +
Sbjct: 121 AEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 178
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQE--VGLLEWARTMEA 318
+ PE L T + D + FG+ + E+ T GQE +GL
Sbjct: 179 AWCAPESLKTRTFSHAS-DTWMFGVTLWEMFTY----------GQEPWIGL--------N 219
Query: 319 RNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
++ + +D R E ++ + + C K +RP
Sbjct: 220 GSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 113/282 (40%), Gaps = 47/282 (16%)
Query: 90 IGDGSFGFV----YKAKLSSGVTVAIKKLDKDAF---QGFREFRAEMETLGKLRHRNIVK 142
+GDGSFG V + A V+VA+K L D + +F E+ + L HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
+ G + + ++ E GSL R G L +L + V
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSL------LDRLRKHQGHFLLGTLS--------RYAVQV 124
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM-- 260
A G+ YL K IHRD+ + N+LL + I DFGL R + + H Q +
Sbjct: 125 AEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 182
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQE--VGLLEWARTMEA 318
+ PE L T + D + FG+ + E+ T GQE +GL
Sbjct: 183 AWCAPESLKTRTFSHAS-DTWMFGVTLWEMFTY----------GQEPWIGL--------N 223
Query: 319 RNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPA 360
++ + +D R E ++ + + C K +RP
Sbjct: 224 GSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 88 KIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVK 142
+ IG+G FG V Y + + + VAIK RE F E T+ + H +IVK
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
++G +I E G L +L R +D L SL +++ +
Sbjct: 456 LIGVITEN-PVWIIMELCTLGELRSFLQ--VRKFSLD----LASLILYAYQ--------L 500
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ LAYL K +HRDI + NVL+ S+ + DFGL+R ++ S + +++ + +
Sbjct: 501 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 558
Query: 263 MPPEYLGGN--TAATVMLDVYSFGILMIEI 290
M PE + T+A+ DV+ FG+ M EI
Sbjct: 559 MAPESINFRRFTSAS---DVWMFGVCMWEI 585
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 28/214 (13%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA---EMETLGKLR 136
+D + +++G GSFG V K +G A+K + K + + + E++ L +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NI K+ + L+ E G L + R +VD ++
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-------------- 130
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDS---DFEAHISDFGLARRIDTSHSHVS 253
I+R V +G+ Y H + I+HRD+K N+LL+S D I DFGL+ + S
Sbjct: 131 -IIRQVLSGITYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--X 185
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT Y+ PE L G DV+S G+++
Sbjct: 186 KDKIGTAYYIAPEVLHGTYDEKC--DVWSTGVIL 217
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 121/298 (40%), Gaps = 48/298 (16%)
Query: 73 SMSELIDATDNFSTDKIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAF---QGFREF 125
S++ LI D +K+ GDGSFG V + A V+VA+K L D + +F
Sbjct: 4 SLTCLIGEKDLRLLEKL-GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 126 RAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN 185
E+ + L HRN++++ G + + ++ E GSL R G L
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL------LDRLRKHQGHFLLG 115
Query: 186 SLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
+L + VA G+ YL K IHRD+ + N+LL + I DFGL R +
Sbjct: 116 TLS--------RYAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
Query: 246 DTSHSHVSTQVAGTM--GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLD 303
+ H Q + + PE L T + D + FG+ + E+ T
Sbjct: 166 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHAS-DTWMFGVTLWEMFTY---------- 214
Query: 304 GQE--VGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
GQE +GL ++ + +D R E ++ + + C K +RP
Sbjct: 215 GQEPWIGL--------NGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 121/298 (40%), Gaps = 48/298 (16%)
Query: 73 SMSELIDATDNFSTDKIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAF---QGFREF 125
S++ LI D +K+ GDGSFG V + A V+VA+K L D + +F
Sbjct: 10 SLTCLIGEKDLRLLEKL-GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF 68
Query: 126 RAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN 185
E+ + L HRN++++ G + + ++ E GSL R G L
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL------LDRLRKHQGHFLLG 121
Query: 186 SLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
+L + VA G+ YL K IHRD+ + N+LL + I DFGL R +
Sbjct: 122 TLS--------RYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
Query: 246 DTSHSHVSTQVAGTM--GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLD 303
+ H Q + + PE L T + D + FG+ + E+ T
Sbjct: 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHAS-DTWMFGVTLWEMFTY---------- 220
Query: 304 GQE--VGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
GQE +GL ++ + +D R E ++ + + C K +RP
Sbjct: 221 GQEPWIGL--------NGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 121/298 (40%), Gaps = 48/298 (16%)
Query: 73 SMSELIDATDNFSTDKIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAF---QGFREF 125
S++ LI D +K+ GDGSFG V + A V+VA+K L D + +F
Sbjct: 10 SLTCLIGEKDLRLLEKL-GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF 68
Query: 126 RAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN 185
E+ + L HRN++++ G + + ++ E GSL R G L
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL------LDRLRKHQGHFLLG 121
Query: 186 SLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
+L + VA G+ YL K IHRD+ + N+LL + I DFGL R +
Sbjct: 122 TLS--------RYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
Query: 246 DTSHSHVSTQVAGTM--GYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLD 303
+ H Q + + PE L T + D + FG+ + E+ T
Sbjct: 172 PQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHAS-DTWMFGVTLWEMFTY---------- 220
Query: 304 GQE--VGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERP 359
GQE +GL ++ + +D R E ++ + + C K +RP
Sbjct: 221 GQEPWIGL--------NGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+K+L R+F+ E++ L L IVK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 145 G--YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G Y L+ E++ +G L +L +D S+ L +
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ--RHRARLDASRLL------------LYSSQI 123
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGTM 260
G+ YL + +HRD+ + N+L++S+ I+DFGLA+ +D + V +
Sbjct: 124 CKGMEYLG--SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 181
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ PE L N + DV+SFG+++ E+ T
Sbjct: 182 FWYAPESLSDNIFSR-QSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+K+L R+F+ E++ L L IVK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 145 G--YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G Y L+ E++ +G L +L +D S+ L +
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ--RHRARLDASRLL------------LYSSQI 124
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGTM 260
G+ YL + +HRD+ + N+L++S+ I+DFGLA+ +D + V +
Sbjct: 125 CKGMEYLG--SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 182
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ PE L N + DV+SFG+++ E+ T
Sbjct: 183 FWYAPESLSDNIFSR-QSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 90 IGDGSFGFVYKAKL-----SSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V + ++G VA+K+L R+F+ E++ L L IVK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 145 G--YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
G Y L+ E++ +G L +L +D S+ L +
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ--RHRARLDASRLL------------LYSSQI 136
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR--RIDTSHSHVSTQVAGTM 260
G+ YL + +HRD+ + N+L++S+ I+DFGLA+ +D + V +
Sbjct: 137 CKGMEYLG--SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 194
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ PE L N + DV+SFG+++ E+ T
Sbjct: 195 FWYAPESLSDNIFSR-QSDVWSFGVVLYELFT 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 88 KIIGDGSFGFVYKA-KLSSG----VTVAIKKLDKD-AFQGFREFRAEMETLGKLRHRNIV 141
K++G G+FG VYK + G + VAIK L ++ + + +E E + + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
++LG C + + L+ + + G L L N GS+ L + C
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCL---LDHVRENRGRLGSQDLLNWC-----------MQ 127
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+A G++YL + ++HRD+ + NVL+ S I+DFGLAR +D T+ G
Sbjct: 128 IAKGMSYLEDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE----TEYHADGG 181
Query: 262 YMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
+P +++ + T DV+S+G+ + E+ T
Sbjct: 182 KVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 15/210 (7%)
Query: 82 DNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
++FS +IIG G FG VY K +G A+K LDK + + ETL L R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-----MKQGETLA-LNERIM 242
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
+ ++ + Y F L ++ D D+ L+ S
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDL--HYHLSQHGVFSEADMRFYAA 299
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
+ GL ++H + +++RD+K +N+LLD ISD GLA H S GT
Sbjct: 300 EIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTH 354
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GYM PE L A D +S G ++ ++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 15/210 (7%)
Query: 82 DNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
++FS +IIG G FG VY K +G A+K LDK + + ETL L R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-----MKQGETLA-LNERIM 242
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
+ ++ + Y F L ++ D D+ L+ S
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDL--HYHLSQHGVFSEADMRFYAA 299
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
+ GL ++H + +++RD+K +N+LLD ISD GLA H S GT
Sbjct: 300 EIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTH 354
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GYM PE L A D +S G ++ ++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + T + +G G F V K + S+G+ A K + K + R + E+ L +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
++H N++ + + D +LI E V G L +L + L+ E
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---------------SLTEEE 115
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDF---EAHISDFGLARRIDTSHS 250
+ ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID +
Sbjct: 116 ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 174 F--KNIFGTPAFVAPEIVNYEPLG-LEADMWSIGVI 206
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 82 DNFSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQGFRE------FRAEMETL 132
D + K +G G+ G V ++ K V + I K A RE E+E L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN-SLCPLS 191
KL H I+KI + D ++ E +E G L D V G+K+L + C L
Sbjct: 209 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---------FDKVVGNKRLKEATCKLY 258
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGLARRIDTS 248
+ + V+ YLH E IIHRD+K NVLL S E I+DFG ++ +
Sbjct: 259 FYQMLLAVQ-------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--G 307
Query: 249 HSHVSTQVAGTMGYMPPEYL--GGNTAATVMLDVYSFGILMI 288
+ + + GT Y+ PE L G +D +S G+++
Sbjct: 308 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLD--KDAFQGFREFRAEMETLGKLRHRNIVKILGY 146
IG+GSFG K + G IK+++ + + + E R E+ L ++H NIV+ Y
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQ---Y 88
Query: 147 CASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGL 206
S F ENGSL + D D+ K++N+ + ++ + V L
Sbjct: 89 RES---------FEENGSL-YIVMDYCEGGDL--FKRINAQKGVLFQEDQILDWFVQICL 136
Query: 207 AYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPE 266
A H ++ I+HRDIKS N+ L D + DFG+AR ++++ ++ GT Y+ PE
Sbjct: 137 ALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-VELARACIGTPYYLSPE 195
Query: 267 YLGGNTAATVMLDVYSFGILMIEIAT 292
+ N D+++ G ++ E+ T
Sbjct: 196 -ICENKPYNNKSDIWALGCVLYELCT 220
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 15/210 (7%)
Query: 82 DNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
++FS +IIG G FG VY K +G A+K LDK + + ETL L R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-----MKQGETLA-LNERIM 242
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
+ ++ + Y F L ++ D D+ L+ S
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDL--HYHLSQHGVFSEADMRFYAA 299
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
+ GL ++H + +++RD+K +N+LLD ISD GLA H S GT
Sbjct: 300 EIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTH 354
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GYM PE L A D +S G ++ ++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 88 KIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVK 142
+ IG+G FG V Y + + + VAIK RE F E T+ + H +IVK
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
++G +I E G L +L R +D L SL +++ +
Sbjct: 76 LIGVITEN-PVWIIMELCTLGELRSFLQ--VRKFSLD----LASLILYAYQ--------L 120
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ LAYL K +HRDI + NVL+ + + DFGL+R ++ S + +++ + +
Sbjct: 121 STALAYLES--KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 263 MPPEYLGGN--TAATVMLDVYSFGILMIEI 290
M PE + T+A+ DV+ FG+ M EI
Sbjct: 179 MAPESINFRRFTSAS---DVWMFGVCMWEI 205
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQ----GFREFRAEMETLGKLRHRNIVKIL 144
+G G++G V A +G VAIKKL + FQ R +R E+ L +RH N++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYR-PFQSELFAKRAYR-ELRLLKHMRHENVI--- 87
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK-IVRGVA 203
GL V + + D +L D+ + L E R++ +V +
Sbjct: 88 -----GLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG----EDRIQFLVYQML 138
Query: 204 NGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYM 263
GL Y+H IIHRD+K N+ ++ D E I DFGLAR+ D S + V T Y
Sbjct: 139 KGLRYIHA--AGIIHRDLKPGNLAVNEDCELKILDFGLARQAD---SEMXGXVV-TRWYR 192
Query: 264 PPEYLGGNTAATVMLDVYSFGILMIEIAT 292
PE + T +D++S G +M E+ T
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMIT 221
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 15/210 (7%)
Query: 82 DNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
++FS +IIG G FG VY K +G A+K LDK + + ETL L R +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-----MKQGETLA-LNERIM 241
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
+ ++ + Y F L ++ D D+ L+ S
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDL--HYHLSQHGVFSEADMRFYAA 298
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
+ GL ++H + +++RD+K +N+LLD ISD GLA H S GT
Sbjct: 299 EIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTH 353
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GYM PE L A D +S G ++ ++
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKL 383
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 82 DNFSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQGFRE------FRAEMETL 132
D + K +G G+ G V ++ K V + I K A RE E+E L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 133 GKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN-SLCPLS 191
KL H I+KI + D ++ E +E G L D V G+K+L + C L
Sbjct: 195 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---------FDKVVGNKRLKEATCKLY 244
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDFGLARRIDTS 248
+ + V+ YLH E IIHRD+K NVLL S E I+DFG ++ +
Sbjct: 245 FYQMLLAVQ-------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--G 293
Query: 249 HSHVSTQVAGTMGYMPPEYL--GGNTAATVMLDVYSFGILMI 288
+ + + GT Y+ PE L G +D +S G+++
Sbjct: 294 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 29/228 (12%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKA---KLSSGVTVAIKKLDK---DAF---QGFREFRAEM 129
+ + +ST +G G+FGFV+ A + + V V K +K D + + E+
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 130 ETLGKLRHRNIVKILG-YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLC 188
L ++ H NI+K+L + G ++++ + L ++ R D+
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDE----------- 129
Query: 189 PLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS 248
PL+ I R + + + YL K IIHRDIK N+++ DF + DFG A ++
Sbjct: 130 PLA----SYIFRQLVSAVGYLRL--KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE-- 181
Query: 249 HSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT+ Y PE L GN L+++S G+ + + + P
Sbjct: 182 RGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 22/218 (10%)
Query: 82 DNFSTDKIIGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
D++ + +G G+FG V++ + ++G A K + R E++T+ LRH +
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
V + + V+IYEF+ G L + + D +S + V+ +R
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--------------MSEDEAVEYMR 262
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDS--DFEAHISDFGLARRIDTSHSHVSTQVAG 258
V GL ++H E +H D+K N++ + E + DFGL +D S T G
Sbjct: 263 QVCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TG 318
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
T + PE G D++S G+L + + + P
Sbjct: 319 TAEFAAPEVAEGKPVG-YYTDMWSVGVLSYILLSGLSP 355
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 70 SQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD--KDAFQGFREFR 126
S+ M+ +DN+ + +G G+F V + ++G+ A K ++ K + + F++
Sbjct: 17 SEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE 76
Query: 127 AEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNS 186
E KL+H NIV++ L+++ V G L + + + D S
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---- 132
Query: 187 LCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA---HISDFGLAR 243
++ + +AY H I+HR++K N+LL S + ++DFGLA
Sbjct: 133 -----------CIQQILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLA- 178
Query: 244 RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
I+ + S AGT GY+ PE L + + +D+++ G+++
Sbjct: 179 -IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVIL 220
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 130
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 131 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 181
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 182 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 90 IGDGSFGFV----YKAKLSSGVTVAIKKLDKDAFQG-FREFRAEMETLGKLRHRNIVKIL 144
+G G+FG V Y+ + + VAIK L + + E E + + +L + IV+++
Sbjct: 18 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 145 GYC-ASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVA 203
G C A L +L+ E G L ++L + +++ P+S +++ V+
Sbjct: 77 GVCQAEAL--MLVMEMAGGGPLHKFL--VGKREEI----------PVS--NVAELLHQVS 120
Query: 204 NGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT--MG 261
G+ YL EK +HRD+ + NVLL + A ISDFGL++ + S+ + + AG +
Sbjct: 121 MGMKYLE--EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK 178
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIE 289
+ PE + ++ DV+S+G+ M E
Sbjct: 179 WYAPECINFRKFSS-RSDVWSYGVTMWE 205
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 84 FSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIV 141
F + +G G+F V A+ ++G A+K + K A +G E+ L K++H NIV
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+ S L+ + V G L + + + D S ++R
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS---------------TLIRQ 128
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLL---DSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
V + + YLH + I+HRD+K N+L D + + ISDFGL++ V + G
Sbjct: 129 VLDAVYYLHRM--GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACG 184
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGIL 286
T GY+ PE L + +D +S G++
Sbjct: 185 TPGYVAPEVLAQKPYSKA-VDCWSIGVI 211
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 79 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 129
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 130 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 180
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 181 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD--KDAFQGFREFRAEMETLGKLRH 137
+DN+ + +G G+F V + ++G+ A K ++ K + + F++ E KL+H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NIV++ L+++ V G L + + + D S
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH--------------- 109
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA---HISDFGLARRIDTSHSHVST 254
++ + +AY H I+HR++K N+LL S + ++DFGLA I+ + S
Sbjct: 110 CIQQILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH 165
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
AGT GY+ PE L + + +D+++ G+++
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSK-PVDIWACGVIL 197
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMET 131
+ D + T + +G G F V K + S+G+ A K + K + R + E+
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
L +++H N++ + + D +LI E V G L +L + L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---------------SLT 112
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDF---EAHISDFGLARRIDT 247
E + ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ + GT ++ PE + + D++S G++
Sbjct: 171 GNEF--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 206
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 127
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 128 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 178
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 179 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 22/218 (10%)
Query: 82 DNFSTDKIIGDGSFGFVYK-AKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
D++ + +G G+FG V++ + ++G A K + R E++T+ LRH +
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
V + + V+IYEF+ G L + + D +S + V+ +R
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--------------MSEDEAVEYMR 156
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSD--FEAHISDFGLARRIDTSHSHVSTQVAG 258
V GL ++H E +H D+K N++ + E + DFGL +D S T G
Sbjct: 157 QVCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TG 212
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
T + PE G D++S G+L + + + P
Sbjct: 213 TAEFAAPEVAEGKPVG-YYTDMWSVGVLSYILLSGLSP 249
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 76 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 126
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 127 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 177
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 178 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD--KDAFQGFREFRAEMETLGKLRH 137
+DN+ + +G G+F V + ++G+ A K ++ K + + F++ E KL+H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NIV++ L+++ V G L + + + D S
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH--------------- 108
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA---HISDFGLARRIDTSHSHVST 254
++ + +AY H I+HR++K N+LL S + ++DFGLA I+ + S
Sbjct: 109 CIQQILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH 164
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
AGT GY+ PE L + + +D+++ G+++
Sbjct: 165 GFAGTPGYLSPEVLKKDPYSK-PVDIWACGVIL 196
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 126
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 127 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 177
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 178 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C V
Sbjct: 86 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWC-------V 134
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+I A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 135 QI----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 187
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 188 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 129
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 130 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 180
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 181 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 128
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 129 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 179
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 180 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C V
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVRE---HKDNIGSQYLLNWC-------V 125
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+I A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 126 QI----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 178
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 179 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 129
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 130 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 180
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 181 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 133
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 134 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 184
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 185 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 128
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 129 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 179
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 180 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C V
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWC-------V 127
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+I A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 128 QI----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 180
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 181 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C
Sbjct: 70 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWC-------- 117
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 118 ---VQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 171
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 172 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C V
Sbjct: 73 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWC-------V 121
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+I A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 122 QI----AEGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 174
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 175 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 85 STDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKI 143
S +I+G G FG V+K + ++G+ +A K + + E + E+ + +L H N++++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 144 LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVA 203
S D VL+ E+V+ G L + D S N L+ + ++ +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYN--------------LTELDTILFMKQIC 197
Query: 204 NGLAYLHGLEKPIIHRDIKSSNVL-LDSDF-EAHISDFGLARRIDTSHSHVSTQVAGTMG 261
G+ ++H + I+H D+K N+L ++ D + I DFGLARR GT
Sbjct: 198 EGIRHMHQMY--ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN--FGTPE 253
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNL 298
++ PE + + + D++S G++ + + + P L
Sbjct: 254 FLAPEVVNYDF-VSFPTDMWSVGVIAYMLLSGLSPFL 289
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C V
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWC-------V 124
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+I A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 125 QI----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 177
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 178 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD--KDAFQGFREFRAEMETLGKLRH 137
+DN+ + +G G+F V + ++G+ A K ++ K + + F++ E KL+H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NIV++ L+++ V G L + + + D S
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH--------------- 109
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA---HISDFGLARRIDTSHSHVST 254
++ + +AY H I+HR++K N+LL S + ++DFGLA I+ + S
Sbjct: 110 CIQQILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH 165
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
AGT GY+ PE L + + +D+++ G+++
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSK-PVDIWACGVIL 197
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 84 FSTDKIIGDGSFGFVYKAKLSSGVTV----AIKKLDKDAF----QGFREFRAEMETLGKL 135
F +++G G +G V++ + +G A+K L K + +AE L ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
+H IV ++ +G LI E++ G L L + +G ++ C E
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-------EREGIFMEDTACFYLAE-- 129
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
++ L +LH +K II+RD+K N++L+ ++DFGL + V+
Sbjct: 130 ------ISMALGHLH--QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHX 180
Query: 256 VAGTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT+ YM PE L G N A +D +S G LM ++ T P
Sbjct: 181 FCGTIEYMAPEILMRSGHNRA----VDWWSLGALMYDMLTGAPP 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 35/225 (15%)
Query: 84 FSTDKIIGDGSFGFVYKAKLSSGVTV----AIKKLDKDAF----QGFREFRAEMETLGKL 135
F +++G G +G V++ + +G A+K L K + +AE L ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
+H IV ++ +G LI E++ G L L + +G ++ C E
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-------EREGIFMEDTACFYLAE-- 129
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
++ L +LH +K II+RD+K N++L+ ++DFGL + ++ H T
Sbjct: 130 ------ISMALGHLH--QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTH 179
Query: 256 V-AGTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT+ YM PE L G N A +D +S G LM ++ T P
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRA----VDWWSLGALMYDMLTGAPP 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C V
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVRE---HKDNIGSQYLLNWC-------V 124
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+I A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 125 QI----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 177
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 178 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 82 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 132
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 133 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 183
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 184 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 88 KIIGDGSFGFV----YKAKLSSGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNIVK 142
+ IG+G FG V Y + + + VAIK RE F E T+ + H +IVK
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 143 ILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
++G +I E G L +L R +D L SL +++ +
Sbjct: 456 LIGVITEN-PVWIIMELCTLGELRSFLQ--VRKFSLD----LASLILYAYQ--------L 500
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ LAYL K +HRDI + NVL+ + + DFGL+R ++ S + +++ + +
Sbjct: 501 STALAYLES--KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 558
Query: 263 MPPEYLGGN--TAATVMLDVYSFGILMIEI 290
M PE + T+A+ DV+ FG+ M EI
Sbjct: 559 MAPESINFRRFTSAS---DVWMFGVCMWEI 585
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + T + +G G F V K + S+G+ A K + K + R + E+ L +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
++H N++ + + D +LI E V G L +L + L+ E
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------------LTEEE 115
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFEA---HISDFGLARRIDTSHS 250
+ ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID +
Sbjct: 116 ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 174 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMET 131
+ D + T + +G G F V K + S+G+ A K + K + R + E+
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
L +++H N++ + + D +LI E V G L +L + L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------------LT 112
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFEA---HISDFGLARRIDT 247
E + ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ + GT ++ PE + + D++S G++
Sbjct: 171 GNEF--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + T + +G G F V K + S+G+ A K + K + R + E+ L +
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
++H N++ + + D +LI E V G L +L + L+ E
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------------LTEEE 114
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFEA---HISDFGLARRIDTSHS 250
+ ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID +
Sbjct: 115 ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 173 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 205
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + T + +G G F V K + S+G+ A K + K + R + E+ L +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
++H N++ + + D +LI E V G L +L + L+ E
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---------------SLTEEE 115
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFEA---HISDFGLARRIDTSHS 250
+ ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID +
Sbjct: 116 ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 174 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 206
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + T + +G G F V K + S+G+ A K + K + R + E+ L +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
++H N++ + + D +LI E V G L +L + L+ E
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---------------SLTEEE 115
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFEA---HISDFGLARRIDTSHS 250
+ ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID +
Sbjct: 116 ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 174 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 206
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + T + +G G F V K + S+G+ A K + K + R + E+ L +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
++H N++ + + D +LI E V G L +L + L+ E
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------------LTEEE 115
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFEA---HISDFGLARRIDTSHS 250
+ ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID +
Sbjct: 116 ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 174 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 206
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 101 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 151
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 152 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 202
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 203 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + T + +G G F V K + S+G+ A K + K + R + E+ L +
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
++H N++ + + D +LI E V G L +L + L+ E
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------------LTEEE 114
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFEA---HISDFGLARRIDTSHS 250
+ ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID +
Sbjct: 115 ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 173 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 205
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMET 131
+ D + T + +G G F V K + S+G+ A K + K + R + E+
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
L +++H N++ + + D +LI E V G L +L + L+
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------------LT 112
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFEA---HISDFGLARRIDT 247
E + ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ + GT ++ PE + + D++S G++
Sbjct: 171 GNEF--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 206
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + T + +G G F V K + S+G+ A K + K + R + E+ L +
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
++H N++ + + D +LI E V G L +L + L+ E
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------------LTEEE 115
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFEA---HISDFGLARRIDTSHS 250
+ ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID +
Sbjct: 116 ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 174 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 206
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 90 IGDGSFGFVYKAK--LSSGVTVAIKKL------DKDAFQGFREFRAEMETLGKLRHRNIV 141
IG+G++G V+KA+ + G VA+K++ + RE A + L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-AVLRHLETFEHPNVV 77
Query: 142 KILGYCA-SGLDR----VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
++ C S DR L++E V DQ L T+ D V + ET
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-----DQDL--TTYLDKVPEPG-------VPTETIK 123
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++ + GL +LH ++HRD+K N+L+ S + ++DFGLAR S T V
Sbjct: 124 DMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSV 179
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
T+ Y PE L ++ AT + D++S G + E+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPV-DLWSVGCIFAEM 212
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 37/231 (16%)
Query: 86 TDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQ-GFREFRAEMETLGKLRHRNIVKIL 144
++KI+G GS G V G VA+K++ D E + E+ H N+++
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD---HPNVIRY- 74
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
YC+ DR L Y +E +L+ S+N + K P+S ++R +A+
Sbjct: 75 -YCSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS------LLRQIAS 126
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLL--DSDFEAH-----------ISDFGLARRIDTSHSH 251
G+A+LH L+ IIHRD+K N+L+ S F A ISDFGL +++D+
Sbjct: 127 GVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 252 VSTQV---AGTMGYMPPEYLGGNTA------ATVMLDVYSFGILMIEIATQ 293
+ +GT G+ PE L + T +D++S G + I ++
Sbjct: 185 FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLSSG-VTVAIKKLDKDAFQGFREFRAEMET----LGKLRH 137
+F K+IG GSFG V A+ + V A+K L K A +E + M L ++H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+V + + + +++ G L L C L R
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQ--------------RERCFLEPRARFY 144
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
+A+ L YLH L I++RD+K N+LLDS ++DFGL + + H+ ++
Sbjct: 145 AAE-IASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKE-NIEHNSTTSTFC 200
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE L + D + G ++ E+ + P
Sbjct: 201 GTPEYLAPEVLHKQPYDRTV-DWWCLGAVLYEMLYGLPP 238
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 27/218 (12%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFRE--FRAEMETLGKLRHRNIVKILGY 146
IG GS+G K + S G + K+LD + + +E+ L +L+H NIV+ Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR---Y 70
Query: 147 CASGLDRV-----LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+DR ++ E+ E G L + G+K+ L E ++++
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVI--------TKGTKERQYL---DEEFVLRVMTQ 119
Query: 202 VANGLAYLHGLE---KPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
+ L H ++HRD+K +NV LD + DFGLAR ++ S T V G
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-G 178
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
T YM PE + + D++S G L+ E+ + P
Sbjct: 179 TPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 31/206 (15%)
Query: 88 KIIGDGSFG--FVYKAKLSSGVTVAIKKLDKDAFQGFRE--FRAEMETLGKLRHRNIVKI 143
+++G G+F F+ K +L+ G A+K + K FR+ E+ L K++H NIV +
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTL 71
Query: 144 LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVA 203
S L+ + V G L + + + D S +++ V
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS---------------LVIQQVL 116
Query: 204 NGLAYLHGLEKPIIHRDIKSSNVLL---DSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
+ + YLH E I+HRD+K N+L + + + I+DFGL++ + + + GT
Sbjct: 117 SAVKYLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMSTACGTP 171
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGIL 286
GY+ PE L + +D +S G++
Sbjct: 172 GYVAPEVLAQKPYSKA-VDCWSIGVI 196
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 90 IGDGSFGFVYKAK--LSSGVTVAIKKL------DKDAFQGFREFRAEMETLGKLRHRNIV 141
IG+G++G V+KA+ + G VA+K++ + RE A + L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-AVLRHLETFEHPNVV 77
Query: 142 KILGYCA-SGLDR----VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
++ C S DR L++E V DQ L T+ D V + ET
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-----DQDL--TTYLDKVPEPG-------VPTETIK 123
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++ + GL +LH ++HRD+K N+L+ S + ++DFGLAR S T V
Sbjct: 124 DMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSV 179
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
T+ Y PE L ++ AT + D++S G + E+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPV-DLWSVGCIFAEM 212
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 31/216 (14%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAKLSSGVTV--AIKKLDKDAFQGFREFRAEMETLGKLR 136
D ++ + IG GS+G V K + G + A KK+ K + F+ E+E + L
Sbjct: 6 DINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSL-DQWLHD-TSRNDDVDGSKQLNSLCPLSWET 194
H NI+++ D L+ E G L ++ +H R D
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA---------------- 108
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLL---DSDFEAHISDFGLARRIDTSHSH 251
+I++ V + +AY H L + HRD+K N L D + DFGLA R
Sbjct: 109 -ARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KM 164
Query: 252 VSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
+ T+V GT Y+ P+ L G D +S G++M
Sbjct: 165 MRTKV-GTPYYVSPQVLEGLYGPEC--DEWSAGVMM 197
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 90 IGDGSFGFVYKAKLSSGVT-VAIKKLDKDAFQGFR-------------EFRAEMETLGKL 135
+G G++G V K +G + AIK + K F R E E+ L L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
H NI+K+ L+ EF E G L + + + + D+ D +
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN------------- 150
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSD---FEAHISDFGLARRIDTSHSHV 252
I++ + +G+ YLH + I+HRDIK N+LL++ I DFGL+ S +
Sbjct: 151 --IMKQILSGICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF--SKDYK 204
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT Y+ PE L DV+S G++M
Sbjct: 205 LRDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIM 237
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + T + +G G F V K + S+G+ A K + K + R + E+ L +
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
++H N++ + + D +LI E V G L +L + L+ E
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------------LTEEE 115
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFEA---HISDFGLARRIDTSHS 250
+ ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID +
Sbjct: 116 ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 174 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 206
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 90/221 (40%), Gaps = 25/221 (11%)
Query: 82 DNFSTDKIIGDGSFGFV-YKAKLSSGVTVAIKKLDKDAFQGFREFR---AEMETLGKLRH 137
D+F + IG GSFG V K + A+K ++K E R E++ + L H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+V + D ++ + + G L L ET
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDL---------------RYHLQQNVHFKEETVKL 119
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
+ + L YL + IIHRD+K N+LLD HI+DF +A + + ++T +A
Sbjct: 120 FICELVMALDYLQN--QRIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITT-MA 175
Query: 258 GTMGYMPPEYLGGNTAA--TVMLDVYSFGILMIEIATQIRP 296
GT YM PE A + +D +S G+ E+ RP
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + T + +G G F V K + S+G+ A K + K + R + E+ L +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
++H N++ + + D +LI E V G L +L + L+ E
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---------------SLTEEE 115
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFEA---HISDFGLARRIDTSHS 250
+ ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID +
Sbjct: 116 ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 174 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 206
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 90 IGDGSFGFVYKAK--LSSGVTVAIKKL------DKDAFQGFREFRAEMETLGKLRHRNIV 141
IG+G++G V+KA+ + G VA+K++ + RE A + L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-AVLRHLETFEHPNVV 77
Query: 142 KILGYCA-SGLDR----VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
++ C S DR L++E V DQ L T+ D V + ET
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-----DQDL--TTYLDKVPEPG-------VPTETIK 123
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
++ + GL +LH ++HRD+K N+L+ S + ++DFGLAR S T V
Sbjct: 124 DMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSV 179
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
T+ Y PE L ++ AT + D++S G + E+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPV-DLWSVGCIFAEM 212
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + T + +G G F V K + S+G+ A K + K + R + E+ L +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
++H N++ + + D +LI E V G L +L + L+ E
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES---------------LTEEE 115
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFEA---HISDFGLARRIDTSHS 250
+ ++ + NG+ YLH L+ I H D+K N+ LLD + I DFGLA +ID +
Sbjct: 116 ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 174 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 206
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 31/216 (14%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAKLSSGVTV--AIKKLDKDAFQGFREFRAEMETLGKLR 136
D ++ + IG GS+G V K + G + A KK+ K + F+ E+E + L
Sbjct: 23 DINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSL-DQWLHD-TSRNDDVDGSKQLNSLCPLSWET 194
H NI+++ D L+ E G L ++ +H R D
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA---------------- 125
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLL---DSDFEAHISDFGLARRIDTSHSH 251
+I++ V + +AY H L + HRD+K N L D + DFGLA R
Sbjct: 126 -ARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KM 181
Query: 252 VSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
+ T+V GT Y+ P+ L G D +S G++M
Sbjct: 182 MRTKV-GTPYYVSPQVLEGLYGPEC--DEWSAGVMM 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAI +L + + + +E E + +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C V
Sbjct: 110 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWC-------V 158
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+I A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 159 QI----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 211
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 212 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 48/249 (19%)
Query: 82 DNFSTDKIIGDGSFGFVYKA--KLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLR 136
D + +IG GS+G V +A KL V VAIKK+ + D R R E+ L +L
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRV-VAIKKILRVFEDLIDCKRILR-EIAILNRLN 110
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H ++VK+L ++I + VE D+ L+ D D K + L+ E +
Sbjct: 111 HDHVVKVLD--------IVIPKDVE--KFDE-LYVVLEIADSDFKKLFRTPVYLT-ELHI 158
Query: 197 K-IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHS----- 250
K ++ + G+ Y+H I+HRD+K +N L++ D + DFGLAR +D +
Sbjct: 159 KTLLYNLLVGVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQL 216
Query: 251 ------------------HVSTQVAG---TMGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
++ Q+ G T Y PE + T +DV+S G + E
Sbjct: 217 PISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAE 276
Query: 290 IATQIRPNL 298
+ I+ N+
Sbjct: 277 LLNMIKENV 285
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQ----GFREFRAEMETLGKLRHRNIVKIL 144
+G G++G V A SG VAIKKL + FQ R +R E+ L ++H N++ +L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYR-ELLLLKHMQHENVIGLL 89
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
Y+F Q D K + S E +V +
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQ----------TDLQKIMG--LKFSEEKIQYLVYQMLK 137
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMP 264
GL Y+H ++HRD+K N+ ++ D E I DFGLAR D T T Y
Sbjct: 138 GLKYIHS--AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRA 191
Query: 265 PEYLGGNTAATVMLDVYSFGILMIEIAT 292
PE + +D++S G +M E+ T
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEMLT 219
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C V
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE---HKDNIGSQYLLNWC-------V 128
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+I A G+ YL ++ ++HRD+ + NVL+ + I+DFG A+ + +
Sbjct: 129 QI----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE- 181
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 182 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
KI + L +LH + +IHRD+K SNVL+++ + + DFG++ + S T
Sbjct: 157 KIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTID 213
Query: 257 AGTMGYMPPEYLG---GNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWA 313
AG YM PE + +V D++S GI MIE+A P W
Sbjct: 214 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP------------YDSWG 261
Query: 314 RTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQ 366
+ + +E + ++ S E+ C + S+ERP ++Q
Sbjct: 262 TPFQQLKQVVEEPSPQLPADKFSA----EFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++ G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 83 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 133
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 134 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 184
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 185 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQ----GFREFRAEMETLGKLRHRNIVKIL 144
+G G++G V A SG VAIKKL + FQ R +R E+ L ++H N++ +L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYR-ELLLLKHMQHENVIGLL 107
Query: 145 GYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVAN 204
Y+F Q D K + S E +V +
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQ----------TDLQKIMG--MEFSEEKIQYLVYQMLK 155
Query: 205 GLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMP 264
GL Y+H ++HRD+K N+ ++ D E I DFGLAR D T T Y
Sbjct: 156 GLKYIHS--AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRA 209
Query: 265 PEYLGGNTAATVMLDVYSFGILMIEIAT 292
PE + +D++S G +M E+ T
Sbjct: 210 PEVILSWMHYNQTVDIWSVGCIMAEMLT 237
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C V
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE---HKDNIGSQYLLNWC-------V 126
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+I A G+ YL ++ ++HRD+ + NVL+ + I+DFG A+ + +
Sbjct: 127 QI----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE- 179
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 180 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C V
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE---HKDNIGSQYLLNWC-------V 126
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+I A G+ YL ++ ++HRD+ + NVL+ + I+DFG A+ + +
Sbjct: 127 QI----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE- 179
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 180 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C V
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWC-------V 124
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+I A G+ YL ++ ++HRD+ + NVL+ + I+DFG A+ + +
Sbjct: 125 QI----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE- 177
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 178 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 128 EMETLGKLRHRNIVKILGYCASGLDRVL--IYEFVENGSLDQWLHDTSRNDDVDGSKQLN 185
E+ L KL H N+VK++ + L ++E V G + ++
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----------------MEVP 129
Query: 186 SLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI 245
+L PLS + + + G+ YLH + IIHRDIK SN+L+ D I+DFG++
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLH--YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 246 DTSHSHVSTQVAGTMGYMPPEYLGGNTA--ATVMLDVYSFGILM 287
S + +S V GT +M PE L + LDV++ G+ +
Sbjct: 188 KGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++ G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 126
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 127 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 177
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 178 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C V
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWC-------V 131
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+I A G+ YL ++ ++HRD+ + NVL+ + I+DFG A+ + +
Sbjct: 132 QI----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE- 184
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 185 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++ G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L L+W ++
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYL-----LNWCVQI 133
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
A G+ YL ++ ++HRD+ + NVL+ + I+DFGLA+ + +
Sbjct: 134 ------AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE- 184
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 185 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSG----VTVAIKKL-DKDAFQGFREFRAEMETLGKLR 136
F K++G G+FG VYK + G + VAIK+L + + + +E E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ ++ ++LG C + + LI + + G L ++ + + D GS+ L + C V
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWC-------V 126
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+I A G+ YL ++ ++HRD+ + NVL+ + I+DFG A+ + +
Sbjct: 127 QI----AKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE- 179
Query: 257 AGTMGYMPPEYLGGNTAA----TVMLDVYSFGILMIEIAT 292
G +P +++ + T DV+S+G+ + E+ T
Sbjct: 180 ---GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 27/205 (13%)
Query: 89 IIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQG--FREFRAEMETLGKLRHRNIVKILG 145
++G GSFG V K K + A+K ++K + + E+E L KL H NI+K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 146 YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANG 205
++ E G L + R + D ++ I++ V +G
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---------------IIKQVFSG 133
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDS---DFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ Y+H + I+HRD+K N+LL+S D + I DFGL+ ++ + ++ GT Y
Sbjct: 134 ITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYY 189
Query: 263 MPPEYLGGNTAATVMLDVYSFGILM 287
+ PE L G DV+S G+++
Sbjct: 190 IAPEVLRGTYDEKC--DVWSAGVIL 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 27/205 (13%)
Query: 89 IIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQG--FREFRAEMETLGKLRHRNIVKILG 145
++G GSFG V K K + A+K ++K + + E+E L KL H NI+K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 146 YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANG 205
++ E G L + R + D ++ I++ V +G
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---------------IIKQVFSG 133
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDS---DFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ Y+H + I+HRD+K N+LL+S D + I DFGL+ ++ + ++ GT Y
Sbjct: 134 ITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYY 189
Query: 263 MPPEYLGGNTAATVMLDVYSFGILM 287
+ PE L G DV+S G+++
Sbjct: 190 IAPEVLRGTYDEKC--DVWSAGVIL 212
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 104/236 (44%), Gaps = 40/236 (16%)
Query: 70 SQISMSELIDAT----DNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDK---DAFQG 121
+Q E+ D+T + K IG G+ G V A G+ VA+KKL + +
Sbjct: 8 NQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA 67
Query: 122 FREFRAEMETLGKLRHRNIVKILGYCASG------LDRVLIYEFVENGSLDQWLHDTSRN 175
R +R E+ L + H+NI+ +L D L+ E + + +L Q +H
Sbjct: 68 KRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIH----- 120
Query: 176 DDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAH 235
L E ++ + G+ +LH IIHRD+K SN+++ SD
Sbjct: 121 ------------MELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLK 166
Query: 236 ISDFGLARRIDTSHSHVSTQVAGTMGYMPPEY-LGGNTAATVMLDVYSFGILMIEI 290
I DFGLAR T + + T T Y PE LG AA V D++S G +M E+
Sbjct: 167 ILDFGLARTACT--NFMMTPYVVTRYYRAPEVILGMGYAANV--DIWSVGCIMGEL 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 27/205 (13%)
Query: 89 IIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQG--FREFRAEMETLGKLRHRNIVKILG 145
++G GSFG V K K + A+K ++K + + E+E L KL H NI+K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 146 YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANG 205
++ E G L + R + D ++ I++ V +G
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---------------IIKQVFSG 133
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDS---DFEAHISDFGLARRIDTSHSHVSTQVAGTMGY 262
+ Y+H + I+HRD+K N+LL+S D + I DFGL+ ++ + ++ GT Y
Sbjct: 134 ITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYY 189
Query: 263 MPPEYLGGNTAATVMLDVYSFGILM 287
+ PE L G DV+S G+++
Sbjct: 190 IAPEVLRGTYDEKC--DVWSAGVIL 212
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 27/218 (12%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFRE--FRAEMETLGKLRHRNIVKILGY 146
IG GS+G K + S G + K+LD + + +E+ L +L+H NIV+ Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR---Y 70
Query: 147 CASGLDRV-----LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+DR ++ E+ E G L + G+K+ L E ++++
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVI--------TKGTKERQYL---DEEFVLRVMTQ 119
Query: 202 VANGLAYLHGLE---KPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
+ L H ++HRD+K +NV LD + DFGLAR ++ S V G
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-G 178
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
T YM PE + + D++S G L+ E+ + P
Sbjct: 179 TPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 27/218 (12%)
Query: 90 IGDGSFGFVYKAKLSS-GVTVAIKKLDKDAFQGFRE--FRAEMETLGKLRHRNIVKILGY 146
IG GS+G K + S G + K+LD + + +E+ L +L+H NIV+ Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR---Y 70
Query: 147 CASGLDRV-----LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+DR ++ E+ E G L + G+K+ L E ++++
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVI--------TKGTKERQYL---DEEFVLRVMTQ 119
Query: 202 VANGLAYLHGLE---KPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
+ L H ++HRD+K +NV LD + DFGLAR ++ + + G
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-FAKEFVG 178
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
T YM PE + + D++S G L+ E+ + P
Sbjct: 179 TPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 135/362 (37%), Gaps = 95/362 (26%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKA------KLSSGVTVAIKKLDKDAFQGFREFRAEMETLG 133
A + K +G G+FG V +A K + TVA+K L + A E++A M L
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATAS--EYKALMTELK 82
Query: 134 KL----RHRNIVKILG--------------YCASG------------------------- 150
L H N+V +LG YC G
Sbjct: 83 ILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEP 142
Query: 151 ----------------LDRVLIYE-FVENG-SLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
LD V E F +G D+ L D +D DG + P++
Sbjct: 143 KKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKE----PITM 198
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHV 252
E + VA G+ +L + IHRD+ + N+LL + I DFGLAR I + +V
Sbjct: 199 EDLISYSFQVARGMEFLSS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYV 256
Query: 253 ST-QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRPNLP-VVLDGQEVGLL 310
+ +M PE + +T DV+S+G+L+ EI + P V +D L
Sbjct: 257 RKGDTRLPLKWMAPESIFDKIYSTKS-DVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRL 315
Query: 311 EWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQLLDE 370
M A E E ++I C + +ERP + +V+ L +
Sbjct: 316 REGMRMRA-----------------PEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGD 358
Query: 371 LV 372
L+
Sbjct: 359 LL 360
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 39/248 (15%)
Query: 77 LIDATDNFSTDKIIGDGSFGFVYKAKLSSGVTV-AIKKLDKDAF-----QGFREFRAEME 130
L++ + IG GS+G V A + + AIK ++K+ + + E+
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80
Query: 131 TLGKLRHRNIVKILGYCASGLDRVLIYEFVENG----SLDQWLHDTSRNDDVDGSKQLNS 186
+ KL H NI ++ L+ E G L+ ++ D++ +D K
Sbjct: 81 LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 187 LCP-----------------LSWETRVK----IVRGVANGLAYLHGLEKPIIHRDIKSSN 225
CP L + R K I+R + + L YLH + I HRDIK N
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN--QGICHRDIKPEN 198
Query: 226 VLLDSD--FEAHISDFGLAR---RIDTSHSHVSTQVAGTMGYMPPEYLG-GNTAATVMLD 279
L ++ FE + DFGL++ +++ + T AGT ++ PE L N + D
Sbjct: 199 FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258
Query: 280 VYSFGILM 287
+S G+L+
Sbjct: 259 AWSAGVLL 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
+R + G YLH +IHRD+K N+ L+ D E I DFGLA +++ T + G
Sbjct: 123 LRQIVLGCQYLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCG 179
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T Y+ PE L + +DV+S G +M
Sbjct: 180 TPNYIAPEVL-SKKGHSFEVDVWSIGCIM 207
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
+R + G YLH +IHRD+K N+ L+ D E I DFGLA +++ T + G
Sbjct: 123 LRQIVLGCQYLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCG 179
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T Y+ PE L + +DV+S G +M
Sbjct: 180 TPNYIAPEVL-SKKGHSFEVDVWSIGCIM 207
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
+R + G YLH +IHRD+K N+ L+ D E I DFGLA +++ T + G
Sbjct: 127 LRQIVLGCQYLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCG 183
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T Y+ PE L + +DV+S G +M
Sbjct: 184 TPNYIAPEVL-SKKGHSFEVDVWSIGCIM 211
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRN- 139
D F K +G GSFG V K SG A+K LDK ++ + L+ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 140 --IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +A
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLA 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 90 IGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G GSFG V++ K +G A+KK+ + F+ E+ L IV + G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 120
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVA-NGLA 207
G + E +E GSL Q + KQ+ L P E R G A GL
Sbjct: 121 EGPWVNIFMELLEGGSLGQLI------------KQMGCL-P---EDRALYYLGQALEGLE 164
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSD-FEAHISDFG--LARRIDTSHSHVSTQ--VAGTMGY 262
YLH + I+H D+K+ NVLL SD A + DFG L + D + T + GT +
Sbjct: 165 YLH--TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 222
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
M PE + G +D++S +M+ + P
Sbjct: 223 MAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K IG GSFG V K + +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLA-RRIDTSHSHVSTQ 255
KI + L +LH + +IHRD+K SNVL+++ + + DFG++ +D +
Sbjct: 113 KIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-- 169
Query: 256 VAGTMGYMPPEYLG---GNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEW 312
AG YM PE + +V D++S GI MIE+A P W
Sbjct: 170 -AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP------------YDSW 216
Query: 313 ARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQ 366
+ + +E + ++ S E+ C + S+ERP ++Q
Sbjct: 217 GTPFQQLKQVVEEPSPQLPADKFSA----EFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 150
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 151 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 200
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 201 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 238
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 90 IGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G GSFG V++ K +G A+KK+ + F+ E+ L IV + G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 136
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVA-NGLA 207
G + E +E GSL Q + KQ+ L P E R G A GL
Sbjct: 137 EGPWVNIFMELLEGGSLGQLI------------KQMGCL-P---EDRALYYLGQALEGLE 180
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSD-FEAHISDFG--LARRIDTSHSHVSTQ--VAGTMGY 262
YLH + I+H D+K+ NVLL SD A + DFG L + D + T + GT +
Sbjct: 181 YLH--TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 238
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
M PE + G +D++S +M+ + P
Sbjct: 239 MAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 98/230 (42%), Gaps = 39/230 (16%)
Query: 89 IIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEM---ETLGKLRHRNIVKIL 144
I+G G+ V++ + +G AIK + +F R +M E L KL H+NIVK+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
R VLI EF GSL L + S + S+ L ++R V
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL------------IVLRDV 121
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLL----DSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
G+ +L E I+HR+IK N++ D ++DFG AR ++ VS + G
Sbjct: 122 VGGMNHLR--ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYG 177
Query: 259 TMGYMPPEYL---------GGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T Y+ P+ ATV D++S G+ AT P P
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATV--DLWSIGVTFYHAATGSLPFRP 225
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 92/229 (40%), Gaps = 49/229 (21%)
Query: 88 KIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVK---I 143
K +G G G V+ A VAIKK+ Q + E++ + +L H NIVK I
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 144 LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLC--------------- 188
LG S L DDV +LNS+
Sbjct: 77 LGPSGSQL-----------------------TDDVGSLTELNSVYIVQEYMETDLANVLE 113
Query: 189 --PLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDS-DFEAHISDFGLARRI 245
PL E + + GL Y+H ++HRD+K +N+ +++ D I DFGLAR +
Sbjct: 114 QGPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
Query: 246 DTSHSHVSTQVAG--TMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
D +SH G T Y P L T +D+++ G + E+ T
Sbjct: 172 DPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 106/245 (43%), Gaps = 43/245 (17%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDK---DAFQGFREFRAEMETLG 133
+ DN+ +IG GS+G+VY A ++ VAIKK+++ D R R E+ L
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITILN 80
Query: 134 KLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQW--LHDTSRNDDVDGSKQLNSLCPLS 191
+L+ I+++ Y+ + L ++ L+ D D K + L+
Sbjct: 81 RLKSDYIIRL-------------YDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLT 127
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS--- 248
E I+ + G ++H E IIHRD+K +N LL+ D + DFGLAR I++
Sbjct: 128 EEHIKTILYNLLLGENFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185
Query: 249 ---------------HSHVSTQVAG---TMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ ++ Q+ T Y PE + T +D++S G + E+
Sbjct: 186 NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
Query: 291 ATQIR 295
++
Sbjct: 246 LNMLQ 250
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK +E E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+ G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+++D ++DFGLA+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRN- 139
D F K +G GSFG V K + +G A+K LDK ++ + L+ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 140 --IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 150
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 151 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLC 200
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 201 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 238
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 42/249 (16%)
Query: 78 IDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDK---DAFQGFREFRAEMETLG 133
+ DN+ +IG GS+G+VY A ++ VAIKK+++ D R R E+ L
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILR-EITILN 82
Query: 134 KLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
+L+ I+++ D ++ + ++ L L D D K + L+ +
Sbjct: 83 RLKSDYIIRLH-------DLIIPEDLLKFDELYIVLEIA----DSDLKKLFKTPIFLTEQ 131
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTS----- 248
I+ + G ++H E IIHRD+K +N LL+ D I DFGLAR I++
Sbjct: 132 HVKTILYNLLLGEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHI 189
Query: 249 ----------------HSHVSTQVAG---TMGYMPPEYLGGNTAATVMLDVYSFGILMIE 289
+ ++ Q+ T Y PE + T +D++S G + E
Sbjct: 190 VNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAE 249
Query: 290 IATQIRPNL 298
+ ++ ++
Sbjct: 250 LLNMMKSHI 258
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 90 IGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVKILGYCA 148
+G GSFG V++ K +G A+KK+ + F+ E+ L IV + G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 134
Query: 149 SGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVA-NGLA 207
G + E +E GSL Q + KQ+ L P E R G A GL
Sbjct: 135 EGPWVNIFMELLEGGSLGQLI------------KQMGCL-P---EDRALYYLGQALEGLE 178
Query: 208 YLHGLEKPIIHRDIKSSNVLLDSDF-EAHISDFG--LARRIDTSHSHVSTQ--VAGTMGY 262
YLH + I+H D+K+ NVLL SD A + DFG L + D + T + GT +
Sbjct: 179 YLH--TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 236
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
M PE + G +D++S +M+ + P
Sbjct: 237 MAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 135
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 136 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLC 185
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 186 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 223
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 79 DATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFR------EFRAEMET 131
D D++ + +G G F V K + +G A K + K R E E+
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 132 LGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLS 191
L ++RH NI+ + + D VLI E V G L +L + L+
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---------------SLT 113
Query: 192 WETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDF---EAHISDFGLARRIDT 247
+ + ++ + +G+ YLH K I H D+K N+ LLD + + DFG+A +I+
Sbjct: 114 EDEATQFLKQILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 171
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ + GT ++ PE + + D++S G++
Sbjct: 172 GNEF--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 207
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 98/235 (41%), Gaps = 30/235 (12%)
Query: 67 PSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREF 125
PSL QI + ++F K++G GSFG V+ A+ + AIK L KD +
Sbjct: 9 PSL-QIKLK-----IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDV 62
Query: 126 RAEMETLGKL----RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGS 181
M L H + + + + + E++ G L + + D
Sbjct: 63 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFD----- 117
Query: 182 KQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGL 241
LS T + GL +LH K I++RD+K N+LLD D I+DFG+
Sbjct: 118 --------LSRATFY--AAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGM 165
Query: 242 ARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ + + + GT Y+ PE L G +D +SFG+L+ E+ P
Sbjct: 166 CKE-NMLGDAKTNEFCGTPDYIAPEILLGQKYNHS-VDWWSFGVLLYEMLIGQSP 218
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE-----------PHARFYAAQ 150
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 151 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 200
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 201 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K SG A+K LDK ++ E L +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 170
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + + +
Sbjct: 171 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA----TWTLC 220
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 221 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 258
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK +E E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+ G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+++D ++DFGLA+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 114/294 (38%), Gaps = 45/294 (15%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLSSG-VTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIV 141
NF T + + G ++K + + V + K+ + + R+F E L H N++
Sbjct: 13 NFLTK--LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 142 KILGYCAS--GLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
+LG C S LI + GSL LH+ + N VD S+ VK
Sbjct: 71 PVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGT-NFVVDQSQA------------VKFA 117
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT 259
A G A+LH LE I + S +V +D D A IS D S S
Sbjct: 118 LDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARIS------XADVKFSFQSPGRXYA 171
Query: 260 MGYMPPEYLGGNTAATVM--LDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEWARTME 317
++ PE L T D +SF +L+ E+ T+ P L E+G
Sbjct: 172 PAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPF--ADLSNXEIGX-------- 221
Query: 318 ARNKEIEMVDSNISREELSEAGVREYF-RIACMCTNEKSRERPAMSYVVQLLDE 370
+E + I G+ + ++ +C NE +RP +V +L++
Sbjct: 222 --KVALEGLRPTIP------PGISPHVSKLXKICXNEDPAKRPKFDXIVPILEK 267
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 32/217 (14%)
Query: 86 TDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLR-HRNIVKI 143
T +++G+G++ V A L +G A+K ++K A E+ETL + + ++NI+++
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 144 LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVA 203
+ + L++E ++ GS+ + ++ + S+ +VR VA
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR---------------VVRDVA 121
Query: 204 NGLAYLHGLEKPIIHRDIKSSNVLLDSDFE---AHISDF--GLARRIDTSHSHVS----T 254
L +LH K I HRD+K N+L +S + I DF G +++ S + ++ T
Sbjct: 122 AALDFLH--TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 255 QVAGTMGYMPPE----YLGGNTAATVMLDVYSFGILM 287
G+ YM PE + T D++S G+++
Sbjct: 180 TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVL 216
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K SG A+K LDK ++ E L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K SG A+K LDK ++ E L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K SG A+K LDK ++ E L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRN- 139
D F K +G GSFG V K SG A+K LDK ++ + L+ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 140 --IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRN- 139
D F K +G GSFG V K SG A+K LDK ++ + L+ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 140 --IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRN- 139
D F K +G GSFG V K SG A+K LDK ++ + L+ N
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 140 --IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 150
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 151 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 200
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 201 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K SG A+K LDK ++ E L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 38/235 (16%)
Query: 70 SQISMSELIDAT----DNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDK---DAFQG 121
SQ ++ D+T + K IG G+ G V A G+ VA+KKL + +
Sbjct: 6 SQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA 65
Query: 122 FREFRAEMETLGKLRHRNIVKILGYCASG------LDRVLIYEFVENGSLDQWLHDTSRN 175
R +R E+ L + H+NI+ +L D L+ E + + +L Q +H
Sbjct: 66 KRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIH----- 118
Query: 176 DDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAH 235
L E ++ + G+ +LH IIHRD+K SN+++ SD
Sbjct: 119 ------------MELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLK 164
Query: 236 ISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
I DFGLAR T + + T T Y PE + G +D++S G +M E+
Sbjct: 165 ILDFGLARTAST--NFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEL 216
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 38/243 (15%)
Query: 67 PSLSQISMSE----LIDATDNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQ-G 121
PSL Q E +I +F ++G G+ G + + VA+K++ + F
Sbjct: 5 PSLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA 64
Query: 122 FREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVE--NGSLDQWLHDTSRNDDVD 179
RE + E+ H N+++ Y + DR Y +E +L +++
Sbjct: 65 DREVQLLRESD---EHPNVIR---YFCTEKDRQFQYIAIELCAATLQEYV---------- 108
Query: 180 GSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLD-----SDFEA 234
+ L E + +++ +GLA+LH L I+HRD+K N+L+ +A
Sbjct: 109 ---EQKDFAHLGLEP-ITLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKA 162
Query: 235 HISDFGLARRIDTSHSHVSTQ--VAGTMGYMPPEYLGGNTA--ATVMLDVYSFGILMIEI 290
ISDFGL +++ S + V GT G++ PE L + T +D++S G + +
Sbjct: 163 MISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYV 222
Query: 291 ATQ 293
++
Sbjct: 223 ISE 225
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K SG A+K LDK ++ E L +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 136
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 137 IVLT----FEYLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLC 186
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 187 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 224
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K IG GSFG V K + +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E++ G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K SG A+K LDK ++ E L +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-----------PHARFYAAQ 170
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 171 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 220
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 221 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 258
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRN- 139
D F K +G GSFG V K SG A+K LDK ++ + L+ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 140 --IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K IG GSFG V K + +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E++ G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K SG A+K LDK ++ E L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
+R + G YLH +IHRD+K N+ L+ D E I DFGLA +++ + G
Sbjct: 121 LRQIVLGCQYLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCG 177
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T Y+ PE L + +DV+S G +M
Sbjct: 178 TPNYIAPEVL-SKKGHSFEVDVWSIGCIM 205
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
+R + G YLH +IHRD+K N+ L+ D E I DFGLA +++ + G
Sbjct: 145 LRQIVLGCQYLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCG 201
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T Y+ PE L + +DV+S G +M
Sbjct: 202 TPNYIAPEVL-SKKGHSFEVDVWSIGCIM 229
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
+R + G YLH +IHRD+K N+ L+ D E I DFGLA +++ + G
Sbjct: 147 LRQIVLGCQYLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCG 203
Query: 259 TMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T Y+ PE L + +DV+S G +M
Sbjct: 204 TPNYIAPEVL-SKKGHSFEVDVWSIGCIM 231
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K SG A+K LDK ++ E L +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-----------PHARFYAAQ 144
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 145 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 194
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 195 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 232
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRN- 139
D F K +G GSFG V K SG A+K LDK ++ + L+ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 140 --IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLX 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K +G A+K LDK ++ E L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 150
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 151 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 200
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 201 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K +G A+K LDK ++ E L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 150
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 151 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 200
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 201 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K +G A+K LDK ++ E L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 150
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 151 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 200
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 201 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRN- 139
D F K +G GSFG V K SG A+K LDK ++ + L+ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 140 --IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K +G A+K LDK ++ E L +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 170
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 171 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 220
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 221 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 258
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NI+++ + L+++ ++ G L +L + V S++ ETR
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-----TEKVTLSEK---------ETR- 114
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
KI+R + + LH L I+HRD+K N+LLD D ++DFG + ++D +V
Sbjct: 115 KIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREV 170
Query: 257 AGTMGYMPPEYL-----GGNTAATVMLDVYSFGILM 287
GT Y+ PE + + +D++S G++M
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 206
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K +G A+K LDK ++ E L +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 142
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 143 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 192
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 193 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 230
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQ----GFREFRAEMETLGKLRHRNI 140
K IG G+ G V Y A L V AIKKL + FQ R +R E+ + + H+NI
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNV--AIKKLSR-PFQNQTHAKRAYR-ELVLMKXVNHKNI 85
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
+ +L F +L+++ + +D + L E ++
Sbjct: 86 ISLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY 133
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 134 QMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTR 189
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
Y PE + G +D++S G +M E+
Sbjct: 190 YYRAPEVILG-MGYKENVDIWSVGCIMGEMV 219
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 39/230 (16%)
Query: 89 IIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEM---ETLGKLRHRNIVKIL 144
I+G G+ V++ + +G AIK + +F R +M E L KL H+NIVK+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 145 GYCASGLDR--VLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGV 202
R VLI EF GSL L + S + S+ L ++R V
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL------------IVLRDV 121
Query: 203 ANGLAYLHGLEKPIIHRDIKSSNVLL----DSDFEAHISDFGLARRIDTSHSHVSTQVAG 258
G+ +L E I+HR+IK N++ D ++DFG AR ++ V + G
Sbjct: 122 VGGMNHLR--ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYG 177
Query: 259 TMGYMPPEYL---------GGNTAATVMLDVYSFGILMIEIATQIRPNLP 299
T Y+ P+ ATV D++S G+ AT P P
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATV--DLWSIGVTFYHAATGSLPFRP 225
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K +G A+K LDK ++ E L +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE-----------PHARFYAAQ 142
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 143 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 192
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 193 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 230
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NI+++ + L+++ ++ G L +L + V S++ ETR
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-----TEKVTLSEK---------ETR- 127
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
KI+R + + LH L I+HRD+K N+LLD D ++DFG + ++D +V
Sbjct: 128 KIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREV 183
Query: 257 AGTMGYMPPEYL-----GGNTAATVMLDVYSFGILM 287
GT Y+ PE + + +D++S G++M
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H NI+++ + L+++ ++ G L +L + V S++ ETR
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-----TEKVTLSEK---------ETR- 127
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
KI+R + + LH L I+HRD+K N+LLD D ++DFG + ++D S V
Sbjct: 128 KIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS--V 183
Query: 257 AGTMGYMPPEYL-----GGNTAATVMLDVYSFGILM 287
GT Y+ PE + + +D++S G++M
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDF---EAHISDFGLARRIDTSHSHV 252
+++++ + G+ YLH + I+H D+K N+LL S + + I DFG++R+I H+
Sbjct: 134 IRLIKQILEGVYYLH--QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHACE 189
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
++ GT Y+ PE L + T D+++ GI+ + T P
Sbjct: 190 LREIMGTPEYLAPEILNYDPITTAT-DMWNIGIIAYMLLTHTSP 232
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K SG A+K LDK ++ E L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+++D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIIISKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K SG A+K LDK ++ E L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ ++A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYQMAAGYPP 237
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 28/210 (13%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQ----GFREFRAEMETLGKLRHRNI 140
K IG G+ G V Y A L V AIKKL + FQ R +R E+ + + H+NI
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNV--AIKKLSR-PFQNQTHAKRAYR-ELVLMKVVNHKNI 85
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
+ +L F SL+++ + +D + L E ++
Sbjct: 86 IGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 134 QMLVGIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTR 189
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
Y PE + G +D++S G++M E+
Sbjct: 190 YYRAPEVILG-MGYKENVDIWSVGVIMGEM 218
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 24/220 (10%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFREFRAEMETLGKL----R 136
++F K++G GSFG V+ A+ + AIK L KD + M L
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76
Query: 137 HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
H + + + + + E++ G L + + D LS T
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFD-------------LSRATFY 123
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
+ GL +LH K I++RD+K N+LLD D I+DFG+ + + +
Sbjct: 124 --AAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKE-NMLGDAKTNXF 178
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE L G +D +SFG+L+ E+ P
Sbjct: 179 CGTPDYIAPEILLGQKYNHS-VDWWSFGVLLYEMLIGQSP 217
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 28/210 (13%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQ----GFREFRAEMETLGKLRHRNI 140
K IG G+ G V Y A L V AIKKL + FQ R +R E+ + + H+NI
Sbjct: 30 KPIGSGAQGIVVAAYDAILERNV--AIKKLSR-PFQNQTHAKRAYR-ELVLMKVVNHKNI 85
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
+ +L F SL+++ + +D + L E ++
Sbjct: 86 IGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 134 QMLVGIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTR 189
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
Y PE + G +D++S G++M E+
Sbjct: 190 YYRAPEVILG-MGYKENVDIWSVGVIMGEM 218
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFR---AEMETLGKLRH 137
+ F K++G G+FG V K ++G A+K L K+ E E L RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 138 RNIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ L Y DR+ + E+ G L SR E R
Sbjct: 208 -PFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-------------EDRA 250
Query: 197 KIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
+ + + L YLH EK +++RD+K N++LD D I+DFGL + + + T
Sbjct: 251 RFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT- 308
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT Y+ PE L N +D + G++M E+
Sbjct: 309 FCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEM 342
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D++ + +G G F V K + +G A K + K R E E+ L +
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
+RH NI+ + + D VLI E V G L +L + L+ +
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---------------SLTEDE 109
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDF---EAHISDFGLARRIDTSHS 250
+ ++ + +G+ YLH K I H D+K N+ LLD + + DFG+A +I+ +
Sbjct: 110 ATQFLKQILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 167
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 168 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 200
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+ G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+++D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 32/222 (14%)
Query: 83 NFSTDKI-IGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
+++T ++ +G GSFG V++ + +G A+KK+ + F+ E+ L I
Sbjct: 93 HWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-----EELMACAGLTSPRI 147
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
V + G G + E +E GSL Q + K+ L E R
Sbjct: 148 VPLYGAVREGPWVNIFMELLEGGSLGQLV------------KEQGCLP----EDRALYYL 191
Query: 201 GVA-NGLAYLHGLEKPIIHRDIKSSNVLLDSD-FEAHISDFGLARRIDTSHSHVS----T 254
G A GL YLH + I+H D+K+ NVLL SD A + DFG A + S
Sbjct: 192 GQALEGLEYLH--SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD 249
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT +M PE + G + +DV+S +M+ + P
Sbjct: 250 YIPGTETHMAPEVVLGRS-CDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNII 86
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F +L+++ + +D + L E ++
Sbjct: 87 SLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ 134
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 135 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRY 190
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
Y PE + G +D++S G +M E+
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEMV 219
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 81 TDNFSTDKIIGDGSFGFVY--KAKLSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKL 135
+D + K +G G++G V K KL+ G AIK + K + A E+ L +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
H NI+K+ + + L+ E G L + + +VD +
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV------------- 125
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDS---DFEAHISDFGLARRIDTSHSHV 252
I++ V +G YLH + I+HRD+K N+LL+S D I DFGL ++H V
Sbjct: 126 --IMKQVLSGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGL-----SAHFEV 176
Query: 253 STQVA---GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
++ GT Y+ PE L DV+S G+++
Sbjct: 177 GGKMKERLGTAYYIAPEVLRKKYDEKC--DVWSCGVIL 212
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD--KDAFQGFREFRAEMETLGKLRH 137
TD + + IG G+F V + KL +G A K ++ K + + ++ E L+H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NIV++ + L+++ V G L + + + D S + +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE-------- 114
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA---HISDFGLARRIDTSHSHVST 254
A LH + ++HRD+K N+LL S + ++DFGLA +
Sbjct: 115 ---------AVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD-QQAWF 164
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
AGT GY+ PE L A +D+++ G+++
Sbjct: 165 GFAGTPGYLSPEVL-RKEAYGKPVDIWACGVIL 196
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFR---AEMETLGKLRH 137
+ F K++G G+FG V K ++G A+K L K+ E E L RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 138 RNIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ L Y DR+ + E+ G L SR E R
Sbjct: 211 -PFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-------------EDRA 253
Query: 197 KIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
+ + + L YLH EK +++RD+K N++LD D I+DFGL + + + T
Sbjct: 254 RFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT- 311
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT Y+ PE L N +D + G++M E+
Sbjct: 312 FCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEM 345
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D++ + +G G F V K + +G A K + K R E E+ L +
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
+RH NI+ + + D VLI E V G L +L + L+ +
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---------------SLTEDE 130
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDF---EAHISDFGLARRIDTSHS 250
+ ++ + +G+ YLH K I H D+K N+ LLD + + DFG+A +I+ +
Sbjct: 131 ATQFLKQILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 188
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 189 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 221
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 197 KIVRGVANGLAYL---HGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVS 253
K+ + L YL HG +IHRD+K SN+LLD + + DFG++ R+
Sbjct: 128 KMTVAIVKALYYLKEKHG----VIHRDVKPSNILLDERGQIKLCDFGISGRL--VDDKAK 181
Query: 254 TQVAGTMGYMPPEYLGGNTAAT----VMLDVYSFGILMIEIATQIRP 296
+ AG YM PE + + DV+S GI ++E+AT P
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + + +G G F V K + S+G+ A K + K + R E E+ L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
+ H NI+ + + D VLI E V G L +L LS E
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE---------------SLSEEE 116
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFE-AHIS--DFGLARRIDTSHS 250
++ + +G+ YLH K I H D+K N+ LLD + HI DFGLA I+
Sbjct: 117 ATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 175 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 207
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 84 FSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRH 137
+ K IG G+ G V Y A L V AIKKL + + R +R E+ + + H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 75
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+NI+ +L F +L+++ + +D + L E
Sbjct: 76 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY 123
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
++ + G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T
Sbjct: 124 LLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYV 179
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
T Y PE + G +D++S G +M E+
Sbjct: 180 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMV 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQ----GFREFRAEMETLGKLRHRNI 140
K IG G+ G V Y A L V AIKKL + FQ R +R E+ + + H+NI
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNV--AIKKLSR-PFQNQTHAKRAYR-ELVLMKCVNHKNI 85
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
+ +L F +L+++ + +D + L E ++
Sbjct: 86 ISLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY 133
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTM 260
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 134 QMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTR 189
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
Y PE + G +D++S G +M E+
Sbjct: 190 YYRAPEVILG-MGYKENVDIWSVGCIMGEMV 219
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + + +G G F V K + S+G+ A K + K + R E E+ L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
+ H N++ + + D VLI E V G L +L LS E
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---------------SLSEEE 116
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFE-AHIS--DFGLARRIDTSHS 250
++ + +G+ YLH K I H D+K N+ LLD + HI DFGLA I+
Sbjct: 117 ATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 175 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 207
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 108/248 (43%), Gaps = 30/248 (12%)
Query: 53 DLSSIALFDSASFDPSLSQISMSELIDAT----DNFSTDKIIGDGSFGFV---YKAKLSS 105
D+S IA + S +Q E+ D+T + K IG G+ G V Y A L
Sbjct: 29 DVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDR 88
Query: 106 GVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVEN 162
V AIKKL + + R +R E+ + + H+NI+ +L F
Sbjct: 89 NV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNV------------FTPQ 133
Query: 163 GSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIK 222
+L+++ + +D + L E ++ + G+ +LH IIHRD+K
Sbjct: 134 KTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLK 191
Query: 223 SSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYS 282
SN+++ SD I DFGLAR T S + T T Y PE + G +D++S
Sbjct: 192 PSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG-MGYKENVDIWS 248
Query: 283 FGILMIEI 290
G +M E+
Sbjct: 249 VGCIMGEM 256
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 17/189 (8%)
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQV 256
KI L +L K IIHRDIK SN+LLD + DFG++ ++ S T+
Sbjct: 129 KITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKTRD 185
Query: 257 AGTMGYMPPEYLGGNTAAT---VMLDVYSFGILMIEIATQIRP---------NLPVVLDG 304
AG YM PE + + + V DV+S GI + E+AT P L V+ G
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG 245
Query: 305 QEVGLLEWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYV 364
L + E I V+ ++++E +E + + E+ R YV
Sbjct: 246 DPPQLSN-SEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEE-RAVEVACYV 303
Query: 365 VQLLDELVA 373
++LD++ A
Sbjct: 304 CKILDQMPA 312
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 83 NFSTDKI-IGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNI 140
+++T ++ +G GSFG V++ + +G A+KK+ + F+ E+ L I
Sbjct: 74 HWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-----EELMACAGLTSPRI 128
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
V + G G + E +E GSL Q + K+ L E R
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLV------------KEQGCLP----EDRALYYL 172
Query: 201 GVA-NGLAYLHGLEKPIIHRDIKSSNVLLDSD-FEAHISDFGLA--RRIDTSHSHVSTQ- 255
G A GL YLH + I+H D+K+ NVLL SD A + DFG A + D + T
Sbjct: 173 GQALEGLEYLH--SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD 230
Query: 256 -VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT +M PE + G + +DV+S +M+ + P
Sbjct: 231 YIPGTETHMAPEVVLGRS-CDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 81 TDNFSTDKIIGDGSFGF--VYKAKLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHR 138
+D + K IG G+FG + + KL+ + VA+K +++ A + E+ LRH
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKEL-VAVKYIERGAAID-ENVQREIINHRSLRHP 76
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIV+ + +I E+ G L + + + R S +
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR---------------FSEDEARFF 121
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAH--ISDFGLARRIDTSHSHVSTQV 256
+ + +G++Y H ++ I HRD+K N LLD I DFG ++ HS + V
Sbjct: 122 FQQLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPKSTV 178
Query: 257 AGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT Y+ PE L + DV+S G+ +
Sbjct: 179 -GTPAYIAPEVLLRQEYDGKIADVWSCGVTL 208
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+ G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+++D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 108/248 (43%), Gaps = 30/248 (12%)
Query: 53 DLSSIALFDSASFDPSLSQISMSELIDAT----DNFSTDKIIGDGSFGFV---YKAKLSS 105
D+S IA + S +Q E+ D+T + K IG G+ G V Y A L
Sbjct: 29 DVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDR 88
Query: 106 GVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVEN 162
V AIKKL + + R +R E+ + + H+NI+ +L F
Sbjct: 89 NV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNV------------FTPQ 133
Query: 163 GSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIK 222
+L+++ + +D + L E ++ + G+ +LH IIHRD+K
Sbjct: 134 KTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLK 191
Query: 223 SSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYS 282
SN+++ SD I DFGLAR T S + T T Y PE + G +D++S
Sbjct: 192 PSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG-MGYKENVDIWS 248
Query: 283 FGILMIEI 290
G +M E+
Sbjct: 249 VGCIMGEM 256
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + + +G G F V K + S+G+ A K + K + R E E+ L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
+ H N++ + + D VLI E V G L +L LS E
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---------------SLSEEE 116
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFE-AHIS--DFGLARRIDTSHS 250
++ + +G+ YLH K I H D+K N+ LLD + HI DFGLA I+
Sbjct: 117 ATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 175 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 207
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
+R G+ YLH +IHRD+K N+ L+ D + I DFGLA +I+ T +
Sbjct: 147 FMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LC 203
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT Y+ PE L + +D++S G ++
Sbjct: 204 GTPNYIAPEVL-CKKGHSFEVDIWSLGCIL 232
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + + +G G F V K + S+G+ A K + K + R E E+ L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
+ H N++ + + D VLI E V G L +L LS E
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---------------SLSEEE 116
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFE-AHIS--DFGLARRIDTSHS 250
++ + +G+ YLH K I H D+K N+ LLD + HI DFGLA I+
Sbjct: 117 ATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 175 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 207
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 26/191 (13%)
Query: 107 VTVAIKKLDKDAFQGFRE-FRAEMETLGKLR-HRNIVKILGYCASGLDRVLIYEFVENGS 164
+ V ++L + + RE R E L ++ H +I+ ++ S L+++ + G
Sbjct: 127 MEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE 186
Query: 165 LDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSS 224
L +L + V S++ ETR I+R + +++LH I+HRD+K
Sbjct: 187 LFDYL-----TEKVALSEK---------ETR-SIMRSLLEAVSFLHA--NNIVHRDLKPE 229
Query: 225 NVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAAT-----VMLD 279
N+LLD + + +SDFG + ++ ++ GT GY+ PE L + T +D
Sbjct: 230 NILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVD 287
Query: 280 VYSFGILMIEI 290
+++ G+++ +
Sbjct: 288 LWACGVILFTL 298
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + + +G G F V K + S+G+ A K + K + R E E+ L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
+ H N++ + + D VLI E V G L +L LS E
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---------------SLSEEE 116
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFE-AHIS--DFGLARRIDTSHS 250
++ + +G+ YLH K I H D+K N+ LLD + HI DFGLA I+
Sbjct: 117 ATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 175 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 207
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 68 SLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFR 126
++++++M+E F K++G G+FG V K ++G A+K L K+ E
Sbjct: 2 AMARVTMNE-------FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA 54
Query: 127 ---AEMETLGKLRHRNIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSK 182
E L RH + L Y DR+ + E+ G L + H +
Sbjct: 55 HTLTENRVLQNSRH-PFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRER------- 104
Query: 183 QLNSLCPLSWETRVKIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGL 241
+ E R + + + L YLH EK +++RD+K N++LD D I+DFGL
Sbjct: 105 -------VFSEDRARFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGL 156
Query: 242 ARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ GT Y+ PE L N +D + G++M E+
Sbjct: 157 CKE-GIKDGATMKXFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEM 203
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNII 86
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F SL+++ + +D + L E ++
Sbjct: 87 GLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 135 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY 190
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEI 290
Y PE + G +D++S G +M E+
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEM 218
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+ G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+++D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNII 86
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F +L+++ + +D + L E ++
Sbjct: 87 SLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 135 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRY 190
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
Y PE + G +D++S G +M E+
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEMV 219
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFR------EFRAEMETLGK 134
D + + +G G F V K + S+G+ A K + K + R E E+ L +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 135 LRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWET 194
+ H N++ + + D VLI E V G L +L LS E
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---------------SLSEEE 116
Query: 195 RVKIVRGVANGLAYLHGLEKPIIHRDIKSSNV-LLDSDFE-AHIS--DFGLARRIDTSHS 250
++ + +G+ YLH K I H D+K N+ LLD + HI DFGLA I+
Sbjct: 117 ATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 251 HVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGIL 286
+ GT ++ PE + + D++S G++
Sbjct: 175 F--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVI 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K SG A+K LDK ++ E L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ P + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEYLAPAIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 27/215 (12%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFR---AEMETLGKLRH 137
++F K++G G+FG V + ++G A+K L K+ E E L RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 138 RNIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ L Y DR+ + E+ G L + H + + E R
Sbjct: 68 -PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER--------------VFTEERA 110
Query: 197 KIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
+ + + L YLH + +++RDIK N++LD D I+DFGL + + + + T
Sbjct: 111 RFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 167
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT Y+ PE L N +D + G++M E+
Sbjct: 168 FCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEM 201
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 33/227 (14%)
Query: 70 SQISMSELIDATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFR-- 126
S+++M+E F K++G G+FG V K ++G A+K L K+ E
Sbjct: 3 SRVTMNE-------FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT 55
Query: 127 -AEMETLGKLRHRNIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
E L RH + L Y DR+ + E+ G L + H +
Sbjct: 56 LTENRVLQNSRH-PFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRER--------- 103
Query: 185 NSLCPLSWETRVKIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLAR 243
+ E R + + + L YLH EK +++RD+K N++LD D I+DFGL +
Sbjct: 104 -----VFSEDRARFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
Query: 244 RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT Y+ PE L N +D + G++M E+
Sbjct: 158 E-GIKDGATMKXFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEM 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 27/215 (12%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFR---AEMETLGKLRH 137
++F K++G G+FG V + ++G A+K L K+ E E L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 138 RNIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ L Y DR+ + E+ G L + H + + E R
Sbjct: 65 -PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER--------------VFTEERA 107
Query: 197 KIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
+ + + L YLH + +++RDIK N++LD D I+DFGL + + + + T
Sbjct: 108 RFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 164
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT Y+ PE L N +D + G++M E+
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEM 198
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 84 FSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRH 137
+ K IG G+ G V Y A L VAIKKL + + R +R E+ + + H
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILER--NVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 84
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+NI+ +L F SL+++ + +D + L E
Sbjct: 85 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 132
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
++ + G+ +LH IIHRD+K SN+++ SD I DFGLAR TS V V
Sbjct: 133 LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV- 189
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
T Y PE + G +D++S G +M E+
Sbjct: 190 -TRYYRAPEVILG-MGYKENVDIWSVGCIMGEM 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNII 86
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F SL+++ + +D + L E ++
Sbjct: 87 GLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 135 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRY 190
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEI 290
Y PE + G +D++S G +M E+
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEM 218
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 27/215 (12%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFR---AEMETLGKLRH 137
++F K++G G+FG V + ++G A+K L K+ E E L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 138 RNIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ L Y DR+ + E+ G L + H + + E R
Sbjct: 65 -PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER--------------VFTEERA 107
Query: 197 KIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
+ + + L YLH + +++RDIK N++LD D I+DFGL + + + + T
Sbjct: 108 RFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 164
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT Y+ PE L N +D + G++M E+
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEM 198
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 89 IIGDGSFGFVYKAKLSS------GVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRNIVK 142
++G+GS+G V K L S V + KK + G + E++ L +LRH+N+++
Sbjct: 12 LLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 143 ILG--YCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
++ Y ++ E+ G Q + D+ + C L
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGM--QEMLDSVPEKRFPVCQAHGYFCQL---------- 118
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA-GT 259
+GL YLH + I+H+DIK N+LL + IS G+A + + + + + G+
Sbjct: 119 --IDGLEYLH--SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGS 174
Query: 260 MGYMPPEYLGG-NTAATVMLDVYSFGILMIEIATQIRP 296
+ PPE G +T + +D++S G+ + I T + P
Sbjct: 175 PAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 84 FSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRH 137
+ K IG G+ G V Y A L V AIKKL + + R +R E+ + + H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 76
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+NI+ +L F +L+++ + +D + L E
Sbjct: 77 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 124
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
++ + G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T
Sbjct: 125 LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYV 180
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
T Y PE + G +D++S G +M E+
Sbjct: 181 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMV 213
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNII 86
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F SL+++ + +D + L E ++
Sbjct: 87 GLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 135 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY 190
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEI 290
Y PE + G +D++S G +M E+
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEM 218
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNII 86
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F SL+++ + +D + L E ++
Sbjct: 87 GLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 135 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRY 190
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEI 290
Y PE + G +D++S G +M E+
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEM 218
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 26/216 (12%)
Query: 84 FSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRH 137
+ K IG G+ G V Y A L V AIKKL + + R +R E+ + + H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 76
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+NI+ +L F SL+++ + +D + L E
Sbjct: 77 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 124
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
++ + G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T
Sbjct: 125 LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYV 180
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T Y PE + G +D++S G +M E+
Sbjct: 181 VTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCH 215
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 90 IGDGSFGFVYKA-KLSSG-------VTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNI 140
+G G+F ++K + G V +K LDK A + + E F + KL H+++
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK-AHRNYSESFFEAASMMSKLSHKHL 74
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
V G C G + +L+ EFV+ GSLD +L K+ + + W ++++ +
Sbjct: 75 VLNYGVCVCGDENILVQEFVKFGSLDTYL------------KKNKNCINILW--KLEVAK 120
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT- 259
+A + +L E +IH ++ + N+LL + + G I S +S V
Sbjct: 121 QLAAAMHFLE--ENTLIHGNVCAKNILLIREEDRKT---GNPPFIKLSDPGISITVLPKD 175
Query: 260 -----MGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ ++PPE + + D +SFG + EI +
Sbjct: 176 ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNII 86
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F +L+++ + +D + L E ++
Sbjct: 87 SLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 135 MLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY 190
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEI 290
Y PE + G +D++S G +M E+
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEM 218
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 84 FSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRH 137
+ K IG G+ G V Y A L V AIKKL + + R +R E+ + + H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 75
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+NI+ +L F +L+++ + +D + L E
Sbjct: 76 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 123
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
++ + G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T
Sbjct: 124 LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYV 179
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
T Y PE + G +D++S G +M E+
Sbjct: 180 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMV 212
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 27/215 (12%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFR---AEMETLGKLRH 137
++F K++G G+FG V + ++G A+K L K+ E E L RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 138 RNIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ L Y DR+ + E+ G L + H + + E R
Sbjct: 70 -PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER--------------VFTEERA 112
Query: 197 KIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
+ + + L YLH + +++RDIK N++LD D I+DFGL + S
Sbjct: 113 RFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKX 169
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT Y+ PE L N +D + G++M E+
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEM 203
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 84 FSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRH 137
+ K IG G+ G V Y A L V AIKKL + + R +R E+ + + H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 76
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+NI+ +L F +L+++ + +D + L E
Sbjct: 77 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 124
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
++ + G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T
Sbjct: 125 LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYV 180
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
T Y PE + G +D++S G +M E+
Sbjct: 181 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMV 213
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 27/215 (12%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFR---AEMETLGKLRH 137
++F K++G G+FG V + ++G A+K L K+ E E L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 138 RNIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ L Y DR+ + E+ G L + H + + E R
Sbjct: 65 -PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER--------------VFTEERA 107
Query: 197 KIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
+ + + L YLH + +++RDIK N++LD D I+DFGL + S
Sbjct: 108 RFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKX 164
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT Y+ PE L N +D + G++M E+
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEM 198
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 84 FSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRH 137
+ K IG G+ G V Y A L VAIKKL + + R +R E+ + + H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILER--NVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 83
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+NI+ +L F SL+++ + +D + L E
Sbjct: 84 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 131
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
++ + G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T
Sbjct: 132 LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYV 187
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
T Y PE + G +D++S G +M E+
Sbjct: 188 VTRYYRAPEVILG-MGYKENVDIWSVGCIMGEM 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNII 86
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F SL+++ + +D + L E ++
Sbjct: 87 GLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 135 MLVGIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRY 190
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEI 290
Y PE + G +D++S G +M E+
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEM 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNII 87
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F +L+++ + +D + L E ++
Sbjct: 88 SLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 136 MLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY 191
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
Y PE + G +D++S G +M E+
Sbjct: 192 YRAPEVILG-MGYKENVDIWSVGCIMGEMV 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFR---AEMETLGKLRH 137
+ F K++G G+FG V K ++G A+K L K+ E E L RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 138 RNIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ L Y DR+ + E+ G L + H + + E R
Sbjct: 70 -PFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRER--------------VFSEDRA 112
Query: 197 KIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
+ + + L YLH EK +++RD+K N++LD D I+DFGL +
Sbjct: 113 RFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKX 170
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT Y+ PE L N +D + G++M E+
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEM 204
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 29 KPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNII 85
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F +L+++ + +D + L E ++
Sbjct: 86 SLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 133
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 134 MLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY 189
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
Y PE + G +D++S G +M E+
Sbjct: 190 YRAPEVILG-MGYKENVDIWSVGCIMGEMV 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 81 TDNFSTDKIIGDGSFGFVY--KAKLSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKL 135
+D + K +G G++G V K KL+ G AIK + K + A E+ L +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
H NI+K+ + + L+ E G L + + +VD +
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV------------- 108
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDS---DFEAHISDFGLARRIDTSHSHV 252
I++ V +G YLH + I+HRD+K N+LL+S D I DFGL ++H V
Sbjct: 109 --IMKQVLSGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGL-----SAHFEV 159
Query: 253 STQVA---GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
++ GT Y+ PE L DV+S G+++
Sbjct: 160 GGKMKERLGTAYYIAPEVLRKKYDEKC--DVWSCGVIL 195
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNII 86
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F +L+++ + +D + L E ++
Sbjct: 87 SLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 135 MLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY 190
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
Y PE + G +D++S G +M E+
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEMV 219
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 27/215 (12%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFR---AEMETLGKLRH 137
++F K++G G+FG V + ++G A+K L K+ E E L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 138 RNIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ L Y DR+ + E+ G L + H + + E R
Sbjct: 65 -PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER--------------VFTEERA 107
Query: 197 KIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
+ + + L YLH + +++RDIK N++LD D I+DFGL + S
Sbjct: 108 RFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKX 164
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT Y+ PE L N +D + G++M E+
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEM 198
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 27/215 (12%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFR---AEMETLGKLRH 137
++F K++G G+FG V + ++G A+K L K+ E E L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 138 RNIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRV 196
+ L Y DR+ + E+ G L + H + + E R
Sbjct: 65 -PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER--------------VFTEERA 107
Query: 197 KIVRG-VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ 255
+ + + L YLH + +++RDIK N++LD D I+DFGL + S
Sbjct: 108 RFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKX 164
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT Y+ PE L N +D + G++M E+
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEM 198
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNII 86
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F SL+++ + +D + L E ++
Sbjct: 87 GLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 135 MLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY 190
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEI 290
Y PE + G +D++S G +M E+
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEM 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNII 87
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F +L+++ + +D + L E ++
Sbjct: 88 SLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 136 MLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY 191
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
Y PE + G +D++S G +M E+
Sbjct: 192 YRAPEVILG-MGYKENVDIWSVGCIMGEMV 220
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 26/216 (12%)
Query: 84 FSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRH 137
+ K IG G+ G V Y A L V AIKKL + + R +R E+ + + H
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 87
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+NI+ +L F SL+++ + +D + L E
Sbjct: 88 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 135
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
++ + G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T
Sbjct: 136 LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYV 191
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T Y PE + G +D++S G +M E+
Sbjct: 192 VTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCH 226
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 88 KIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRHRNIV 141
K IG G+ G V Y A L V AIKKL + + R +R E+ + + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNII 86
Query: 142 KILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG 201
+L F SL+++ + +D + L E ++
Sbjct: 87 GLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ G+ +LH IIHRD+K SN+++ SD I DFGLAR T S + T T
Sbjct: 135 MLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPEVVTRY 190
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEI 290
Y PE + G +D++S G +M E+
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEM 218
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 44/243 (18%)
Query: 80 ATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHR 138
++ +S K +G GSFG V + + SG A+KK+ +D R E++ + L H
Sbjct: 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHV 60
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDG-----------SKQLNSL 187
NI+K++ Y + D E D +N+ V+ +K LN +
Sbjct: 61 NIIKLVDYFYTTGDE----EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVI 116
Query: 188 CPLSWETRVKIVRG-------------------VANGLAYLHGLEKPIIHRDIKSSNVLL 228
+T K+++ + + ++H L I HRDIK N+L+
Sbjct: 117 MEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG--ICHRDIKPQNLLV 174
Query: 229 DS-DFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
+S D + DFG A+++ S V+ + Y PE + G T T +D++S G +
Sbjct: 175 NSKDNTLKLCDFGSAKKLIPSEPSVAX--ICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232
Query: 288 IEI 290
E+
Sbjct: 233 GEL 235
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 107/253 (42%), Gaps = 36/253 (14%)
Query: 128 EMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSL-DQWLHDTSRNDDVDGSKQLNS 186
E+ L L H NI+K+ + + L+ E + G L D+ +H N+ VD +
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNE-VDAAV---- 140
Query: 187 LCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDS---DFEAHISDFGLAR 243
I++ V +G+ YLH + I+HRD+K N+LL+S D I DFGL+
Sbjct: 141 -----------IIKQVLSGVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187
Query: 244 RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP----NLP 299
+ + GT Y+ PE L DV+S G+++ + P
Sbjct: 188 VFENQKK--MKERLGTAYYIAPEVLRKKYDEKC--DVWSIGVILFILLAGYPPFGGQTDQ 243
Query: 300 VVLDGQEVGLL-----EWARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEK 354
+L E G EW E I+ + S+ +S E+ I MC+ ++
Sbjct: 244 EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKE 303
Query: 355 SR-ERPAMSYVVQ 366
S E P+++ ++
Sbjct: 304 SGIELPSLANAIE 316
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
+R G+ YLH +IHRD+K N+ L+ D + I DFGLA +I+ +
Sbjct: 131 FMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLC 187
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT Y+ PE L + +D++S G ++
Sbjct: 188 GTPNYIAPEVL-CKKGHSFEVDIWSLGCIL 216
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
++ L YLH E+ II+RD+K NVLLDS+ ++D+G+ + ++ GT
Sbjct: 130 ISLALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPN 186
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
Y+ PE L G +D ++ G+LM E+ P
Sbjct: 187 YIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSP 220
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
+R G+ YLH +IHRD+K N+ L+ D + I DFGLA +I+ +
Sbjct: 147 FMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLC 203
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT Y+ PE L + +D++S G ++
Sbjct: 204 GTPNYIAPEVL-CKKGHSFEVDIWSLGCIL 232
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
+R G+ YLH +IHRD+K N+ L+ D + I DFGLA +I+ +
Sbjct: 147 FMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKXLC 203
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT Y+ PE L + +D++S G ++
Sbjct: 204 GTPNYIAPEVL-CKKGHSFEVDIWSLGCIL 232
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+ K+ + ++ E+ G + L R + P + +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 150
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+++D ++DFG A+R+ + +
Sbjct: 151 IVLT----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLC 200
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 201 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 238
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
++ L YLH E+ II+RD+K NVLLDS+ ++D+G+ + ST GT
Sbjct: 162 ISLALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPN 218
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
Y+ PE L G +D ++ G+LM E+ P
Sbjct: 219 YIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSP 252
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+ K+ + ++ E+ G + L R + P + +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 150
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+++D ++DFG A+R+ + +
Sbjct: 151 IVLT----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLC 200
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 201 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K +G A+K LDK ++ E L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+ G + L R + P + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-----------PHARFYAAQ 150
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+++D ++DFG A+R+ + +
Sbjct: 151 IVLT----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLC 200
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 201 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 238
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRN- 139
D F K +G GSFG V K SG A+K LDK ++ + L+ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 140 --IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+VK+ + ++ E+V G + L R + P + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-----------PHARFYAAQ 149
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+L+D ++DFG A+R+ + +
Sbjct: 150 IVLT----FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLC 199
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT + PE + G N A +D ++ G+L+ E+A P
Sbjct: 200 GTPEALAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 237
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
++ L YLH E+ II+RD+K NVLLDS+ ++D+G+ + ++ GT
Sbjct: 115 ISLALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPN 171
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
Y+ PE L G +D ++ G+LM E+ P
Sbjct: 172 YIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSP 205
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
++ L YLH E+ II+RD+K NVLLDS+ ++D+G+ + ++ GT
Sbjct: 119 ISLALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPN 175
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
Y+ PE L G +D ++ G+LM E+ P
Sbjct: 176 YIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSP 209
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 32/222 (14%)
Query: 82 DNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRA---EMETLGKLRH 137
D F K +G GSFG V K + +G A+K LDK ++ E L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+ K+ + ++ E+ G + L R + P + +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE-----------PHARFYAAQ 150
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
IV YLH L+ +I+RD+K N+++D ++DFG A+R+ + +
Sbjct: 151 IVLT----FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLC 200
Query: 258 GTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + G N A +D ++ G+L+ E+A P
Sbjct: 201 GTPEYLAPEIILSKGYNKA----VDWWALGVLIYEMAAGYPP 238
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Query: 84 FSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRH 137
+ K IG G+ G V Y A L V AIKKL + + R +R E+ + + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+NI+ +L F SL+++ + +D + L E
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 130
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
++ + G+ +LH IIHRD+K SN+++ SD I DFGLAR TS V
Sbjct: 131 LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV- 187
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T Y PE + G +D++S G +M E+
Sbjct: 188 -TRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVCH 221
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 90 IGDGSFGFVYKA-KLSSG-------VTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNI 140
+G G+F ++K + G V +K LDK A + + E F + KL H+++
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK-AHRNYSESFFEAASMMSKLSHKHL 74
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVR 200
V G C G + +L+ EFV+ GSLD +L K+ + + W ++++ +
Sbjct: 75 VLNYGVCFCGDENILVQEFVKFGSLDTYL------------KKNKNCINILW--KLEVAK 120
Query: 201 GVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGT- 259
+A + +L E +IH ++ + N+LL + + G I S +S V
Sbjct: 121 QLAWAMHFLE--ENTLIHGNVCAKNILLIREEDRKT---GNPPFIKLSDPGISITVLPKD 175
Query: 260 -----MGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
+ ++PPE + + D +SFG + EI +
Sbjct: 176 ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 35/233 (15%)
Query: 74 MSELIDATDNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDK------------DAFQG 121
++EL ++ + I GS+G V S G+ VAIK++ D+F
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 122 FREFRAEMETLGKLRHRNIVKI----LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDD 177
R R E+ L H NI+ + + + + ++ + + L Q +HD
Sbjct: 74 KRVLR-EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD------ 126
Query: 178 VDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHIS 237
Q + P + + + GL LH E ++HRD+ N+LL + + I
Sbjct: 127 -----QRIVISPQHIQY---FMYHILLGLHVLH--EAGVVHRDLHPGNILLADNNDITIC 176
Query: 238 DFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
DF LAR DT+ ++ T Y PE + T ++D++S G +M E+
Sbjct: 177 DFNLARE-DTADAN-KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 35/233 (15%)
Query: 74 MSELIDATDNFSTDKIIGDGSFGFVYKAKLSSGVTVAIKKLDK------------DAFQG 121
++EL ++ + I GS+G V S G+ VAIK++ D+F
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 122 FREFRAEMETLGKLRHRNIVKI----LGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDD 177
R R E+ L H NI+ + + + + ++ + + L Q +HD
Sbjct: 74 KRVLR-EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD------ 126
Query: 178 VDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHIS 237
Q + P + + + GL LH E ++HRD+ N+LL + + I
Sbjct: 127 -----QRIVISPQHIQY---FMYHILLGLHVLH--EAGVVHRDLHPGNILLADNNDITIC 176
Query: 238 DFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
DF LAR DT+ ++ T Y PE + T ++D++S G +M E+
Sbjct: 177 DFNLARE-DTADAN-KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEM---ETLGKLRHR 138
+F+ ++G GSFG V A + + AIK L KD + M L L
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 139 NIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+ L C +DR+ + E+V G L + + V
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK---------------FKEPQAVF 124
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
++ GL +LH ++ II+RD+K NV+LDS+ I+DFG+ + + +
Sbjct: 125 YAAEISIGLFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-HMMDGVTTREFC 181
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
GT Y+ PE + +D +++G+L+ E+
Sbjct: 182 GTPDYIAPEIIAYQPYGKS-VDWWAYGVLLYEM 213
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG-TM 260
VA G+ +L + IHRD+ + N+LL I DFGLAR I +V A +
Sbjct: 202 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+M PE + + T+ DV+SFG+L+ EI
Sbjct: 260 KWMAPETI-FDRVYTIQSDVWSFGVLLWEI 288
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG-TM 260
VA G+ +L + IHRD+ + N+LL I DFGLAR I +V A +
Sbjct: 207 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+M PE + + T+ DV+SFG+L+ EI
Sbjct: 265 KWMAPETI-FDRVYTIQSDVWSFGVLLWEI 293
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG-TM 260
VA G+ +L + IHRD+ + N+LL I DFGLAR I +V A +
Sbjct: 200 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+M PE + + T+ DV+SFG+L+ EI
Sbjct: 258 KWMAPETI-FDRVYTIQSDVWSFGVLLWEI 286
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 104/251 (41%), Gaps = 41/251 (16%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 17 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 110 AIKKLDKDAFQGFREF----RAEMET--LGKLR--HRNIVKILGYCASGLDRVLIYEFVE 161
AIK ++KD + E R ME L K+ ++++L + VLI E E
Sbjct: 65 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 124
Query: 162 NGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDI 221
D + T R G+ Q W+ ++ VR N ++HRDI
Sbjct: 125 PVQ-DLFDFITER-----GALQEELARSFFWQV-LEAVRHCHNC---------GVLHRDI 168
Query: 222 KSSNVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDV 280
K N+L+D + E + DFG + + V T GT Y PPE++ + V
Sbjct: 169 KDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAV 225
Query: 281 YSFGILMIEIA 291
+S GIL+ ++
Sbjct: 226 WSLGILLYDMV 236
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAG-TM 260
VA G+ +L + IHRD+ + N+LL I DFGLAR I +V A +
Sbjct: 209 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 261 GYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
+M PE + + T+ DV+SFG+L+ EI
Sbjct: 267 KWMAPETI-FDRVYTIQSDVWSFGVLLWEI 295
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 24/174 (13%)
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARR-IDTSHSHVSTQ 255
KI + L +LH + +IHRD+K SNVL+++ + DFG++ +D +
Sbjct: 140 KIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID-- 196
Query: 256 VAGTMGYMPPEYLG---GNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVGLLEW 312
AG Y PE + +V D++S GI IE+A P W
Sbjct: 197 -AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP------------YDSW 243
Query: 313 ARTMEARNKEIEMVDSNISREELSEAGVREYFRIACMCTNEKSRERPAMSYVVQ 366
+ + +E + ++ S E+ C + S+ERP + Q
Sbjct: 244 GTPFQQLKQVVEEPSPQLPADKFSA----EFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Query: 84 FSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDK---DAFQGFREFRAEMETLGKLRH 137
+ K IG G+ G V Y A L V AIKKL + + R +R E+ + + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+NI+ +L F SL+++ + +D + L E
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 130
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
++ + G+ +LH IIHRD+K SN+++ SD I DFGLAR TS V
Sbjct: 131 LLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV- 187
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQ 293
T Y PE + G +D++S G +M E+
Sbjct: 188 -TRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCH 221
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 104/251 (41%), Gaps = 41/251 (16%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 32 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 79
Query: 110 AIKKLDKDAFQGFREF----RAEMET--LGKLR--HRNIVKILGYCASGLDRVLIYEFVE 161
AIK ++KD + E R ME L K+ ++++L + VLI E E
Sbjct: 80 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 139
Query: 162 NGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDI 221
D + T R G+ Q W+ ++ VR N ++HRDI
Sbjct: 140 PVQ-DLFDFITER-----GALQEELARSFFWQV-LEAVRHCHNC---------GVLHRDI 183
Query: 222 KSSNVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDV 280
K N+L+D + E + DFG + + V T GT Y PPE++ + V
Sbjct: 184 KDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAV 240
Query: 281 YSFGILMIEIA 291
+S GIL+ ++
Sbjct: 241 WSLGILLYDMV 251
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 35/247 (14%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 4 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 51
Query: 110 AIKKLDKDAFQGFREF----RAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSL 165
AIK ++KD + E R ME + ++K + SG+ R+L ++ E
Sbjct: 52 AIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKVSSGFSGVIRLL--DWFERP-- 100
Query: 166 DQWLHDTSRNDDV-DGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSS 224
D ++ R + V D + L E V + + H ++HRDIK
Sbjct: 101 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 158
Query: 225 NVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSF 283
N+L+D + E + DFG + + V T GT Y PPE++ + V+S
Sbjct: 159 NILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 215
Query: 284 GILMIEI 290
GIL+ ++
Sbjct: 216 GILLYDM 222
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL LH + I++RD+K N+LLD ISD GLA + + + +V GT+G
Sbjct: 295 ICCGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVG 350
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEI 290
YM PE + N T D ++ G L+ E+
Sbjct: 351 YMAPEVV-KNERYTFSPDWWALGCLLYEM 378
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 35/247 (14%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 5 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 52
Query: 110 AIKKLDKDAFQGFREF----RAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSL 165
AIK ++KD + E R ME + ++K + SG+ R+L ++ E
Sbjct: 53 AIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKVSSGFSGVIRLL--DWFERP-- 101
Query: 166 DQWLHDTSRNDDV-DGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSS 224
D ++ R + V D + L E V + + H ++HRDIK
Sbjct: 102 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 159
Query: 225 NVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSF 283
N+L+D + E + DFG + + V T GT Y PPE++ + V+S
Sbjct: 160 NILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 284 GILMIEI 290
GIL+ ++
Sbjct: 217 GILLYDM 223
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 104/251 (41%), Gaps = 41/251 (16%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 17 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 110 AIKKLDKDAFQGFREF----RAEMET--LGKLR--HRNIVKILGYCASGLDRVLIYEFVE 161
AIK ++KD + E R ME L K+ ++++L + VLI E E
Sbjct: 65 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 124
Query: 162 NGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDI 221
D + T R G+ Q W+ ++ VR N ++HRDI
Sbjct: 125 PVQ-DLFDFITER-----GALQEELARSFFWQV-LEAVRHCHNC---------GVLHRDI 168
Query: 222 KSSNVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDV 280
K N+L+D + E + DFG + + V T GT Y PPE++ + V
Sbjct: 169 KDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAV 225
Query: 281 YSFGILMIEIA 291
+S GIL+ ++
Sbjct: 226 WSLGILLYDMV 236
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 41/250 (16%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 5 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 52
Query: 110 AIKKLDKDAFQGFREF----RAEMET--LGKLR--HRNIVKILGYCASGLDRVLIYEFVE 161
AIK ++KD + E R ME L K+ ++++L + VLI E E
Sbjct: 53 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 112
Query: 162 NGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDI 221
D + T R G+ Q W+ ++ VR N ++HRDI
Sbjct: 113 PVQ-DLFDFITER-----GALQEELARSFFWQV-LEAVRHCHNC---------GVLHRDI 156
Query: 222 KSSNVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDV 280
K N+L+D + E + DFG + + V T GT Y PPE++ + V
Sbjct: 157 KDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAV 213
Query: 281 YSFGILMIEI 290
+S GIL+ ++
Sbjct: 214 WSLGILLYDM 223
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 35/247 (14%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 37 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 84
Query: 110 AIKKLDKDAFQGFREF----RAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSL 165
AIK ++KD + E R ME + ++K + SG+ R+L ++ E
Sbjct: 85 AIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKVSSGFSGVIRLL--DWFERP-- 133
Query: 166 DQWLHDTSRNDDV-DGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSS 224
D ++ R + V D + L E V + + H ++HRDIK
Sbjct: 134 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 191
Query: 225 NVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSF 283
N+L+D + E + DFG + + V T GT Y PPE++ + V+S
Sbjct: 192 NILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 248
Query: 284 GILMIEI 290
GIL+ ++
Sbjct: 249 GILLYDM 255
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 41/250 (16%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 17 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 110 AIKKLDKDAFQGFREF----RAEMET--LGKLR--HRNIVKILGYCASGLDRVLIYEFVE 161
AIK ++KD + E R ME L K+ ++++L + VLI E E
Sbjct: 65 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 124
Query: 162 NGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDI 221
D + T R G+ Q W+ ++ VR N ++HRDI
Sbjct: 125 PVQ-DLFDFITER-----GALQEELARSFFWQV-LEAVRHCHNC---------GVLHRDI 168
Query: 222 KSSNVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDV 280
K N+L+D + E + DFG + + V T GT Y PPE++ + V
Sbjct: 169 KDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAV 225
Query: 281 YSFGILMIEI 290
+S GIL+ ++
Sbjct: 226 WSLGILLYDM 235
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 41/250 (16%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 18 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 110 AIKKLDKDAFQGFREF----RAEMET--LGKLR--HRNIVKILGYCASGLDRVLIYEFVE 161
AIK ++KD + E R ME L K+ ++++L + VLI E E
Sbjct: 66 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 125
Query: 162 NGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDI 221
D + T R G+ Q W+ ++ VR N ++HRDI
Sbjct: 126 PVQ-DLFDFITER-----GALQEELARSFFWQV-LEAVRHCHNC---------GVLHRDI 169
Query: 222 KSSNVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDV 280
K N+L+D + E + DFG + + V T GT Y PPE++ + V
Sbjct: 170 KDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAV 226
Query: 281 YSFGILMIEI 290
+S GIL+ ++
Sbjct: 227 WSLGILLYDM 236
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 35/248 (14%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 24 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 71
Query: 110 AIKKLDKDAFQGFREF----RAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSL 165
AIK ++KD + E R ME + ++K + SG+ R+L ++ E
Sbjct: 72 AIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKVSSGFSGVIRLL--DWFERP-- 120
Query: 166 DQWLHDTSRNDDV-DGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSS 224
D ++ R + V D + L E V + + H ++HRDIK
Sbjct: 121 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 178
Query: 225 NVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSF 283
N+L+D + E + DFG + + V T GT Y PPE++ + V+S
Sbjct: 179 NILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 235
Query: 284 GILMIEIA 291
GIL+ ++
Sbjct: 236 GILLYDMV 243
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 35/247 (14%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 18 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 110 AIKKLDKDAFQGFREF----RAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSL 165
AIK ++KD + E R ME + ++K + SG+ R+L ++ E
Sbjct: 66 AIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKVSSGFSGVIRLL--DWFERP-- 114
Query: 166 DQWLHDTSRNDDV-DGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSS 224
D ++ R + V D + L E V + + H ++HRDIK
Sbjct: 115 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 172
Query: 225 NVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSF 283
N+L+D + E + DFG + + V T GT Y PPE++ + V+S
Sbjct: 173 NILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 284 GILMIEI 290
GIL+ ++
Sbjct: 230 GILLYDM 236
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 35/247 (14%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 5 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 52
Query: 110 AIKKLDKDAFQGFREF----RAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSL 165
AIK ++KD + E R ME + ++K + SG+ R+L ++ E
Sbjct: 53 AIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKVSSGFSGVIRLL--DWFERP-- 101
Query: 166 DQWLHDTSRNDDV-DGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSS 224
D ++ R + V D + L E V + + H ++HRDIK
Sbjct: 102 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 159
Query: 225 NVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSF 283
N+L+D + E + DFG + + V T GT Y PPE++ + V+S
Sbjct: 160 NILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 284 GILMIEI 290
GIL+ ++
Sbjct: 217 GILLYDM 223
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 35/248 (14%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 4 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 51
Query: 110 AIKKLDKDAFQGFREF----RAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSL 165
AIK ++KD + E R ME + ++K + SG+ R+L ++ E
Sbjct: 52 AIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKVSSGFSGVIRLL--DWFERP-- 100
Query: 166 DQWLHDTSRNDDV-DGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSS 224
D ++ R + V D + L E V + + H ++HRDIK
Sbjct: 101 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 158
Query: 225 NVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSF 283
N+L+D + E + DFG + + V T GT Y PPE++ + V+S
Sbjct: 159 NILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 215
Query: 284 GILMIEIA 291
GIL+ ++
Sbjct: 216 GILLYDMV 223
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 41/250 (16%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 18 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 110 AIKKLDKDAFQGFREF----RAEMET--LGKLR--HRNIVKILGYCASGLDRVLIYEFVE 161
AIK ++KD + E R ME L K+ ++++L + VLI E E
Sbjct: 66 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 125
Query: 162 NGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDI 221
D + T R G+ Q W+ ++ VR N ++HRDI
Sbjct: 126 PVQ-DLFDFITER-----GALQEELARSFFWQV-LEAVRHCHNC---------GVLHRDI 169
Query: 222 KSSNVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDV 280
K N+L+D + E + DFG + + V T GT Y PPE++ + V
Sbjct: 170 KDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAV 226
Query: 281 YSFGILMIEI 290
+S GIL+ ++
Sbjct: 227 WSLGILLYDM 236
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 41/250 (16%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 32 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 79
Query: 110 AIKKLDKDAFQGFREF----RAEMET--LGKLR--HRNIVKILGYCASGLDRVLIYEFVE 161
AIK ++KD + E R ME L K+ ++++L + VLI E E
Sbjct: 80 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 139
Query: 162 NGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDI 221
D + T R G+ Q W+ ++ VR N ++HRDI
Sbjct: 140 PVQ-DLFDFITER-----GALQEELARSFFWQV-LEAVRHCHNC---------GVLHRDI 183
Query: 222 KSSNVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDV 280
K N+L+D + E + DFG + + V T GT Y PPE++ + V
Sbjct: 184 KDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAV 240
Query: 281 YSFGILMIEI 290
+S GIL+ ++
Sbjct: 241 WSLGILLYDM 250
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 41/250 (16%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 18 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 110 AIKKLDKDAFQGFREF----RAEMET--LGKLR--HRNIVKILGYCASGLDRVLIYEFVE 161
AIK ++KD + E R ME L K+ ++++L + VLI E E
Sbjct: 66 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 125
Query: 162 NGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDI 221
D + T R G+ Q W+ ++ VR N ++HRDI
Sbjct: 126 PVQ-DLFDFITER-----GALQEELARSFFWQV-LEAVRHCHNC---------GVLHRDI 169
Query: 222 KSSNVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDV 280
K N+L+D + E + DFG + + V T GT Y PPE++ + V
Sbjct: 170 KDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAV 226
Query: 281 YSFGILMIEI 290
+S GIL+ ++
Sbjct: 227 WSLGILLYDM 236
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 41/250 (16%)
Query: 51 CSDLSSIALFDSASFDPSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTV 109
C+DL + L +P SQ + ++G G FG VY ++S + V
Sbjct: 17 CNDLHATKLAPGKEKEPLESQ------------YQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 110 AIKKLDKDAFQGFREF----RAEMET--LGKLR--HRNIVKILGYCASGLDRVLIYEFVE 161
AIK ++KD + E R ME L K+ ++++L + VLI E E
Sbjct: 65 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 124
Query: 162 NGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDI 221
D + T R G+ Q W+ ++ VR N ++HRDI
Sbjct: 125 PVQ-DLFDFITER-----GALQEELARSFFWQV-LEAVRHCHNC---------GVLHRDI 168
Query: 222 KSSNVLLD-SDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDV 280
K N+L+D + E + DFG + + V T GT Y PPE++ + V
Sbjct: 169 KDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAV 225
Query: 281 YSFGILMIEI 290
+S GIL+ ++
Sbjct: 226 WSLGILLYDM 235
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 202 VANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMG 261
+ GL LH + I++RD+K N+LLD ISD GLA + + + +V GT+G
Sbjct: 295 ICCGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVG 350
Query: 262 YMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
YM PE + N T D ++ G L+ E+ P
Sbjct: 351 YMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 206 LAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPP 265
YLH L+ +I+RD+K N+L+D ++DFG A+R+ + + GT Y+ P
Sbjct: 155 FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAP 208
Query: 266 EYL---GGNTAATVMLDVYSFGILMIEIATQIRP 296
E + G N A +D ++ G+L+ E+A P
Sbjct: 209 EIILSKGYNKA----VDWWALGVLIYEMAAGYPP 238
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 23/224 (10%)
Query: 67 PSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREF 125
P++S ++ +D + K IG G+FG + S VA+K +++ +
Sbjct: 4 PAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE-KIAANV 62
Query: 126 RAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN 185
+ E+ LRH NIV+ + ++ E+ G L + + + R
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----------- 111
Query: 186 SLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAH--ISDFGLAR 243
S + + + +G++Y H ++ + HRD+K N LLD I DFG ++
Sbjct: 112 ----FSEDEARFFFQQLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSK 165
Query: 244 RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
HS + V GT Y+ PE L + DV+S G+ +
Sbjct: 166 S-SVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 111/265 (41%), Gaps = 41/265 (15%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAKLSSGVTV-AIKKLDKDAFQGFRE-----FRAEMETLGK 134
+++ K+IG G+FG V + + V A+K L K F+ + F E + +
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSK--FEMIKRSDSAFFWEERDIMAF 131
Query: 135 LRHRNIVKILGYCASGLDRVL--IYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSW 192
+V++ +CA D+ L + E++ G L + N DV P W
Sbjct: 132 ANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLM----SNYDV----------PEKW 175
Query: 193 ETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRID-TSHSH 251
V L +H + +IHRD+K N+LLD ++DFG ++D T H
Sbjct: 176 AKFY--TAEVVLALDAIHSMG--LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVH 231
Query: 252 VSTQVAGTMGYMPPEYL---GGNTAATVMLDVYSFGILMIEIATQIRPNLPVVLDGQEVG 308
T V GT Y+ PE L GG+ D +S G+ + E+ P L G
Sbjct: 232 CDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT--- 287
Query: 309 LLEWARTMEARNKEIEMVDSNISRE 333
+++ M+ +N D+ IS+
Sbjct: 288 ---YSKIMDHKNSLCFPEDAEISKH 309
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 94/271 (34%), Gaps = 71/271 (26%)
Query: 83 NFSTDKIIGDGSFGFVYKAKLS-SGVTVAIKKLDKDAFQGFRE-FRAEMETLGKLRHRNI 140
+F + +G G FG V++AK AIK++ + RE E++ L KL H I
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 141 VKILGYCASGLDRVLIYEFVENGSLDQWLHDTS-------------------RNDDVDGS 181
V+ E E WL D S R D
Sbjct: 67 VRYFNAWLETPPEKWQEEMDE-----IWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTK 121
Query: 182 KQLNSLCPLS-------------------WETR------------VKIVRGVANGLAYLH 210
+ L P S W R + I +A + +LH
Sbjct: 122 NTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH 181
Query: 211 GLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA-----------GT 259
K ++HRD+K SN+ D + DFGL +D + GT
Sbjct: 182 S--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGT 239
Query: 260 MGYMPPEYLGGNTAATVMLDVYSFGILMIEI 290
YM PE + GN + +D++S G+++ E+
Sbjct: 240 KLYMSPEQIHGNNYSH-KVDIFSLGLILFEL 269
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 23/210 (10%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRN 139
+D + K IG G+FG + S VA+K +++ + + E+ LRH N
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE-KIDENVKREIINHRSLRHPN 75
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IV+ + ++ E+ G L + + + R S +
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGR---------------FSEDEARFFF 120
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAH--ISDFGLARRIDTSHSHVSTQVA 257
+ + +G++Y H ++ + HRD+K N LLD I DFG ++ HS + V
Sbjct: 121 QQLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPKSTV- 176
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT Y+ PE L + DV+S G+ +
Sbjct: 177 GTPAYIAPEVLLKKEYDGKVADVWSCGVTL 206
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 25/204 (12%)
Query: 90 IGDGSFGFVYKA-KLSSGVTVAIKKLD--KDAFQGFREFRAEMETLGKLRHRNIVKILGY 146
+G G+F V + K+ +G A K ++ K + + ++ E L+H NIV++
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 147 CASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGL 206
+ LI++ V G L + + + D S + +
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE----------------- 132
Query: 207 AYLHGLEKPIIHRDIKSSNVLLDSDFEA---HISDFGLARRIDTSHSHVSTQVAGTMGYM 263
A LH + ++HRD+K N+LL S + ++DFGLA ++ AGT GY+
Sbjct: 133 AVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYL 191
Query: 264 PPEYLGGNTAATVMLDVYSFGILM 287
PE L + + D+++ G+++
Sbjct: 192 SPEVLRKDPYGKPV-DLWACGVIL 214
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREF----RAEMET--LGKL 135
+ ++G G FG VY ++S + VAIK ++KD + E R ME L K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 136 R--HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
++++L + VLI E +E D + T R G+ Q W+
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQ-DLFDFITER-----GALQEELARSFFWQ 122
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLD-SDFEAHISDFGLARRIDTSHSHV 252
++ VR N ++HRDIK N+L+D + E + DFG + + V
Sbjct: 123 V-LEAVRHCHNC---------GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 169
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
T GT Y PPE++ + V+S GIL+ ++
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 208
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 29/228 (12%)
Query: 74 MSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREF----RAE 128
M E + ++G G FG VY ++S + VAIK ++KD + E R
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 129 MET--LGKLR--HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
ME L K+ ++++L + VLI E E D + T R G+ Q
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITER-----GALQE 114
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLD-SDFEAHISDFGLAR 243
W+ ++ VR N ++HRDIK N+L+D + E + DFG
Sbjct: 115 ELARSFFWQV-LEAVRHCHNC---------GVLHRDIKDENILIDLNRGELKLIDFGSGA 164
Query: 244 RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
+ + V T GT Y PPE++ + V+S GIL+ ++
Sbjct: 165 LLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREF----RAEMET--LGKL 135
+ ++G G FG VY ++S + VAIK ++KD + E R ME L K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 136 R--HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
++++L + VLI E E D + T R G+ Q W+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITER-----GALQEELARSFFWQ 118
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLD-SDFEAHISDFGLARRIDTSHSHV 252
++ VR N ++HRDIK N+L+D + E + DFG + + V
Sbjct: 119 V-LEAVRHCHN---------XGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 165
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
T GT Y PPE++ + V+S GIL+ ++
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 29/228 (12%)
Query: 74 MSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREF----RAE 128
M E + ++G G FG VY ++S + VAIK ++KD + E R
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 129 MET--LGKLR--HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQL 184
ME L K+ ++++L + VLI E E D + T R G+ Q
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITER-----GALQE 114
Query: 185 NSLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLD-SDFEAHISDFGLAR 243
W+ ++ VR N ++HRDIK N+L+D + E + DFG
Sbjct: 115 ELARSFFWQV-LEAVRHCHNC---------GVLHRDIKDENILIDLNRGELKLIDFGSGA 164
Query: 244 RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
+ + V T GT Y PPE++ + V+S GIL+ ++
Sbjct: 165 LLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD--KDAFQGFREFRAEMETLGKLRH 137
TD + + +G G+F V + K+ +G A K ++ K + + ++ E L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NIV++ + L+++ V G L + + + D S + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-----------Q 111
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA---HISDFGLARRIDTSHSHVST 254
I+ V + +L+G I+HRD+K N+LL S + ++DFGLA +
Sbjct: 112 ILESVNH--CHLNG----IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-QQAWF 164
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
AGT GY+ PE L + +D+++ G+++
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKP-VDMWACGVIL 196
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 23/225 (10%)
Query: 74 MSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREF----RAE 128
M E + ++G G FG VY ++S + VAIK ++KD + E R
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 129 METLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDV-DGSKQLNSL 187
ME + ++K + SG+ R+L ++ E D ++ R + V D +
Sbjct: 61 MEVV-------LLKKVSSGFSGVIRLL--DWFERP--DSFVLILERPEPVQDLFDFITER 109
Query: 188 CPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLD-SDFEAHISDFGLARRID 246
L E V + + H ++HRDIK N+L+D + E + DFG +
Sbjct: 110 GALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK 167
Query: 247 TSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
+ V T GT Y PPE++ + V+S GIL+ ++
Sbjct: 168 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLD--KDAFQGFREFRAEMETLGKLRH 137
TD + + +G G+F V + K+ +G A K ++ K + + ++ E L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NIV++ + L+++ V G L + + + D S + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-----------Q 111
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA---HISDFGLARRIDTSHSHVST 254
I+ V + +L+G I+HRD+K N+LL S + ++DFGLA +
Sbjct: 112 ILESVNH--CHLNG----IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWF 164
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
AGT GY+ PE L + +D+++ G+++
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKP-VDMWACGVIL 196
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 23/210 (10%)
Query: 81 TDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLRHRN 139
+D + K IG G+FG + + VA+K +++ + + E+ LRH N
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE-KIDENVKREIINHRSLRHPN 76
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIV 199
IV+ + ++ E+ G L + + + R + + L
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI----------- 125
Query: 200 RGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAH--ISDFGLARRIDTSHSHVSTQVA 257
+G++Y H ++ + HRD+K N LLD I+DFG + + HS + V
Sbjct: 126 ----SGVSYAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYS-KASVLHSQPKSAV- 177
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
GT Y+ PE L + DV+S G+ +
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 23/225 (10%)
Query: 74 MSELIDATDNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREF----RAE 128
M E + ++G G FG VY ++S + VAIK ++KD + E R
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 129 METLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDV-DGSKQLNSL 187
ME + ++K + SG+ R+L ++ E D ++ R + V D +
Sbjct: 83 MEVV-------LLKKVSSGFSGVIRLL--DWFERP--DSFVLILERPEPVQDLFDFITER 131
Query: 188 CPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLD-SDFEAHISDFGLARRID 246
L E V + + H ++HRDIK N+L+D + E + DFG +
Sbjct: 132 GALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLK 189
Query: 247 TSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
+ V T GT Y PPE++ + V+S GIL+ ++
Sbjct: 190 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 231
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREF----RAEMET--LGKL 135
+ ++G G FG VY ++S + VAIK ++KD + E R ME L K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 136 R--HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
++++L + VLI E E D + T R G+ Q W+
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITER-----GALQEELARSFFWQ 122
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLD-SDFEAHISDFGLARRIDTSHSHV 252
++ VR N ++HRDIK N+L+D + E + DFG + + V
Sbjct: 123 V-LEAVRHCHNC---------GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 169
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
T GT Y PPE++ + V+S GIL+ ++
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 208
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREF----RAEMET--LGKL 135
+ ++G G FG VY ++S + VAIK ++KD + E R ME L K+
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 136 R--HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
++++L + VLI E E D + T R G+ Q W+
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITER-----GALQEELARSFFWQ 121
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLD-SDFEAHISDFGLARRIDTSHSHV 252
++ VR N ++HRDIK N+L+D + E + DFG + + V
Sbjct: 122 V-LEAVRHCHNC---------GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 168
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
T GT Y PPE++ + V+S GIL+ ++
Sbjct: 169 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 207
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREF----RAEMET--LGKL 135
+ ++G G FG VY ++S + VAIK ++KD + E R ME L K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 136 R--HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
++++L + VLI E E D + T R G+ Q W+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITER-----GALQEELARSFFWQ 118
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLD-SDFEAHISDFGLARRIDTSHSHV 252
++ VR N ++HRDIK N+L+D + E + DFG + + V
Sbjct: 119 V-LEAVRHCHNC---------GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 165
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
T GT Y PPE++ + V+S GIL+ ++
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 86/212 (40%), Gaps = 39/212 (18%)
Query: 87 DKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREFRAEMETLGKLR-------HR 138
DK +G+GSF K S A+K + K R E T ++ H
Sbjct: 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK---------RMEANTQKEITALKLCEGHP 66
Query: 139 NIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKI 198
NIVK+ L L+ E + G L + + + + S I
Sbjct: 67 NIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY---------------I 111
Query: 199 VRGVANGLAYLHGLEKPIIHRDIKSSNVLL---DSDFEAHISDFGLARRIDTSHSHVSTQ 255
+R + + ++++H + ++HRD+K N+L + + E I DFG AR + + T
Sbjct: 112 MRKLVSAVSHMHDV--GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP 169
Query: 256 VAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T+ Y PE L N D++S G+++
Sbjct: 170 CF-TLHYAAPELLNQN-GYDESCDLWSLGVIL 199
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 84 FSTDKIIGDGSFGFVYKAKLSSGVTVAIK--KLDKDAFQGFREFRAEMETLGKLRHRN-- 139
+S K IG G V++ AIK L++ Q +R E+ L KL+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLD--QWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
I+++ Y + IY +E G++D WL K+ S+ P WE R
Sbjct: 118 IIRLYDY---EITDQYIYMVMECGNIDLNSWL------------KKKKSIDP--WE-RKS 159
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQ 255
+ + + +H + I+H D+K +N L+ D + DFG+A ++ DT+ +Q
Sbjct: 160 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 256 VAGTMGYMPPEYLGGNTAA----------TVMLDVYSFGILM 287
V GT+ YMPPE + +++ + DV+S G ++
Sbjct: 217 V-GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 88/219 (40%), Gaps = 24/219 (10%)
Query: 83 NFSTDKIIGDGSFGFVY-KAKLSSGVTVAIKKLDKDAFQGFREFRAEM---ETLGKLRHR 138
+F+ ++G GSFG V + + A+K L KD + M L
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 139 NIVKILGYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
+ L C +DR+ + E+V G L + R + V
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA---------------VF 125
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVA 257
+A GL +L K II+RD+K NV+LDS+ I+DFG+ + + +
Sbjct: 126 YAAEIAIGLFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFC 182
Query: 258 GTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
GT Y+ PE + +D ++FG+L+ E+ P
Sbjct: 183 GTPDYIAPEIIAYQPYGKS-VDWWAFGVLLYEMLAGQAP 220
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 83 NFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQGFREF----RAEMET--LGKL 135
+ ++G G FG VY ++S + VAIK ++KD + E R ME L K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 136 R--HRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWE 193
++++L + VLI E E D + T R G+ Q W+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITER-----GALQEELARSFFWQ 118
Query: 194 TRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLD-SDFEAHISDFGLARRIDTSHSHV 252
++ VR N ++HRDIK N+L+D + E + DFG + + V
Sbjct: 119 V-LEAVRHCHNC---------GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 165
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIA 291
T GT Y PPE++ + V+S GIL+ ++
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 81 TDNFSTDKIIGDGSFGFVYKA-KLSSGVTVA--IKKLDKDAFQGFREFRAEMETLGKLRH 137
T+ + + +G G+F V + K+ +G A I K + + ++ E L+H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 138 RNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
NIV++ + LI++ V G L + + + D S + +
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-------- 121
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA---HISDFGLARRIDTSHSHVST 254
A LH + ++HR++K N+LL S + ++DFGLA ++
Sbjct: 122 ---------AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWF 171
Query: 255 QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
AGT GY+ PE L + +D+++ G+++
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKP-VDLWACGVIL 203
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 26/208 (12%)
Query: 89 IIGDGSFGFVY-KAKLSSGVTVAIKKLDKDAFQGFREFRAEM---ETLGKLRHRNIVKIL 144
++G GSFG V + + A+K L KD + M L + L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 145 GYCASGLDRV-LIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVA 203
C +DR+ + E+V G L + R + V +A
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA---------------VFYAAEIA 452
Query: 204 NGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQ-VAGTMGY 262
GL +L K II+RD+K NV+LDS+ I+DFG+ + + V+T+ GT Y
Sbjct: 453 IGLFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDY 508
Query: 263 MPPEYLGGNTAATVMLDVYSFGILMIEI 290
+ PE + +D ++FG+L+ E+
Sbjct: 509 IAPEIIAYQPYGKS-VDWWAFGVLLYEM 535
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 84 FSTDKIIGDGSFGFVYKAKLSSGVTVAIK--KLDKDAFQGFREFRAEMETLGKLRHRN-- 139
+S K IG G V++ AIK L++ Q +R E+ L KL+ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLD--QWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
I+++ Y + IY +E G++D WL K+ S+ P WE R
Sbjct: 74 IIRLYDY---EITDQYIYMVMECGNIDLNSWL------------KKKKSIDP--WE-RKS 115
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQ 255
+ + + +H + I+H D+K +N L+ D + DFG+A ++ DT+ +Q
Sbjct: 116 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 172
Query: 256 VAGTMGYMPPEYLGGNTAA----------TVMLDVYSFGILM 287
V GT+ YMPPE + +++ + DV+S G ++
Sbjct: 173 V-GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 213
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 84 FSTDKIIGDGSFGFVYKAKLSSGVTVAIK--KLDKDAFQGFREFRAEMETLGKLRHRN-- 139
+S K IG G V++ AIK L++ Q +R E+ L KL+ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLD--QWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
I+++ Y + IY +E G++D WL K+ S+ P WE R
Sbjct: 90 IIRLYDY---EITDQYIYMVMECGNIDLNSWL------------KKKKSIDP--WE-RKS 131
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQ 255
+ + + +H + I+H D+K +N L+ D + DFG+A ++ DT+ +Q
Sbjct: 132 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 188
Query: 256 VAGTMGYMPPEYLGGNTAA----------TVMLDVYSFGILM 287
V GT+ YMPPE + +++ + DV+S G ++
Sbjct: 189 V-GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 84 FSTDKIIGDGSFGFVYKAKLSSGVTVAIK--KLDKDAFQGFREFRAEMETLGKLRHRN-- 139
+S K IG G V++ AIK L++ Q +R E+ L KL+ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLD--QWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
I+++ Y + IY +E G++D WL K+ S+ P WE R
Sbjct: 70 IIRLYDY---EITDQYIYMVMECGNIDLNSWL------------KKKKSIDP--WE-RKS 111
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQ 255
+ + + +H + I+H D+K +N L+ D + DFG+A ++ DT+ +Q
Sbjct: 112 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 168
Query: 256 VAGTMGYMPPEYLGGNTAA----------TVMLDVYSFGILM 287
V GT+ YMPPE + +++ + DV+S G ++
Sbjct: 169 V-GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 209
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 84 FSTDKIIGDGSFGFVYKAKLSSGVTVAIK--KLDKDAFQGFREFRAEMETLGKLRHRN-- 139
+S K IG G V++ AIK L++ Q +R E+ L KL+ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLD--QWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
I+++ Y + IY +E G++D WL K+ S+ P WE R
Sbjct: 71 IIRLYDY---EITDQYIYMVMECGNIDLNSWL------------KKKKSIDP--WE-RKS 112
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQ 255
+ + + +H + I+H D+K +N L+ D + DFG+A ++ DT+ +Q
Sbjct: 113 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 169
Query: 256 VAGTMGYMPPEYLGGNTAA----------TVMLDVYSFGILM 287
V GT+ YMPPE + +++ + DV+S G ++
Sbjct: 170 V-GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 210
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 83/204 (40%), Gaps = 24/204 (11%)
Query: 98 VYKAKLSSGVTVAIKKLDKDAFQGFREFRA----EMETLGKLRHRNIVKILGYCASGLDR 153
VY+A+ + + KL + FR E T G+L+ ++V I
Sbjct: 50 VYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPI---------- 99
Query: 154 VLIYEFVENGSLDQWLH-DTSRNDDVDGSKQLNSLCPLSWETRVKIVRGVANGLAYLHGL 212
++F G +D L+ D + VD + L PL+ V IVR + G A
Sbjct: 100 ---HDF---GEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQI--GSALDAAH 151
Query: 213 EKPIIHRDIKSSNVLLDSDFEAHISDFGLARRIDTSHSHVSTQVAGTMGYMPPEYLGGNT 272
HRD+K N+L+ +D A++ DFG+A GT+ Y PE +
Sbjct: 152 AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERF-SES 210
Query: 273 AATVMLDVYSFGILMIEIATQIRP 296
AT D+Y+ ++ E T P
Sbjct: 211 HATYRADIYALTCVLYECLTGSPP 234
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 82 DNFSTDKIIGDGSFGFVYKA-KLSSGVTVAIKKLDKDAFQG-----FREFRAEMETLGKL 135
D + ++IG G+F V + +G A+K +D F + + E L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 136 RHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPLSWETR 195
+H +IV++L +S +++EF++ L + K+ ++ S
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLC-----------FEIVKRADAGFVYSEAVA 132
Query: 196 VKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA---HISDFGLARRIDTSHSHV 252
+R + L Y H + IIHRD+K NVLL S + + DFG+A ++ S V
Sbjct: 133 SHYMRQILEALRYCH--DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES-GLV 189
Query: 253 STQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIATQIRP 296
+ GT +M PE + +DV+ G+++ + + P
Sbjct: 190 AGGRVGTPHFMAPEVVKREPYGKP-VDVWGCGVILFILLSGCLP 232
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 84 FSTDKIIGDGSFGFVYKAKLSSGVTVAIK--KLDKDAFQGFREFRAEMETLGKLRHRN-- 139
+S K IG G V++ AIK L++ Q +R E+ L KL+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 140 IVKILGYCASGLDRVLIYEFVENGSLD--QWLHDTSRNDDVDGSKQLNSLCPLSWETRVK 197
I+++ Y + IY +E G++D WL K+ S+ P WE R
Sbjct: 118 IIRLYDY---EITDQYIYMVMECGNIDLNSWL------------KKKKSIDP--WE-RKS 159
Query: 198 IVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHISDFGLARRI--DTSHSHVSTQ 255
+ + + +H + I+H D+K +N L+ D + DFG+A ++ DT+ +Q
Sbjct: 160 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 256 VAGTMGYMPPEYLGGNTAA----------TVMLDVYSFGILM 287
V GT+ YMPPE + +++ + DV+S G ++
Sbjct: 217 V-GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 23/224 (10%)
Query: 67 PSLSQISMSELIDATDNFSTDKIIGDGSFGFVYKAK-LSSGVTVAIKKLDKDAFQGFREF 125
P++S ++ +D + K IG G+FG + S VA+K +++ +
Sbjct: 4 PAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE-KIDENV 62
Query: 126 RAEMETLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLN 185
+ E+ LRH NIV+ + ++ E+ G L + + + R
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----------- 111
Query: 186 SLCPLSWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAH--ISDFGLAR 243
S + + + +G++Y H ++ + HRD+K N LLD I FG ++
Sbjct: 112 ----FSEDEARFFFQQLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
Query: 244 RIDTSHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
HS + V GT Y+ PE L + DV+S G+ +
Sbjct: 166 S-SVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 25/220 (11%)
Query: 74 MSELIDATDNFSTDKIIGDGSFGFV---YKAKLSSGVTVAIKKLDKDAFQGFREFRAEME 130
M+ TD++ + +G G+F V K + I K + + ++ E
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 131 TLGKLRHRNIVKILGYCASGLDRVLIYEFVENGSLDQWLHDTSRNDDVDGSKQLNSLCPL 190
L+H NIV++ + L+++ V G L + + + D S
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH-------- 134
Query: 191 SWETRVKIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEA---HISDFGLARRIDT 247
+ + + ++H + I+HRD+K N+LL S + ++DFGLA +
Sbjct: 135 -------CIHQILESVNHIH--QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ- 184
Query: 248 SHSHVSTQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
AGT GY+ PE L + +D+++ G+++
Sbjct: 185 GEQQAWFGFAGTPGYLSPEVLRKDPYGKP-VDIWACGVIL 223
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 42/224 (18%)
Query: 90 IGDGSFGFVYKAKLSSGVTVAIKKLDKDAFQGFREFRA-EMETLGKLRHRNIVKILGYCA 148
+G G++G VYKAK G L + G E+ L +L+H N++ +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 149 SGLDR--VLIYEFVENGSLDQW----LHDTSRNDDVDGSKQLNSLCPLSWETRVKIVRG- 201
S DR L++++ E+ D W H S+ + + V++ RG
Sbjct: 89 SHADRKVWLLFDYAEH---DLWHIIKFHRASKAN----------------KKPVQLPRGM 129
Query: 202 -------VANGLAYLHGLEKPIIHRDIKSSNVLLDSDF----EAHISDFGLARRIDTSHS 250
+ +G+ YLH ++HRD+K +N+L+ + I+D G AR ++
Sbjct: 130 VKSLLYQILDGIHYLHA--NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK 187
Query: 251 HVST--QVAGTMGYMPPEYLGGNTAATVMLDVYSFGILMIEIAT 292
++ V T Y PE L G T +D+++ G + E+ T
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHI---SDFGLARRIDTSHSHVS 253
+I++ + + YLH + I HRD+K N+L S I +DFG A+ TSH+ ++
Sbjct: 165 EIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHNSLT 221
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T T Y+ PE LG D++S G++M
Sbjct: 222 TPCY-TPYYVAPEVLGPEKYDKS-CDMWSLGVIM 253
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHI---SDFGLARRIDTSHSHVS 253
+I++ + + YLH + I HRD+K N+L S I +DFG A+ TSH+ ++
Sbjct: 126 EIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHNSLT 182
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T T Y+ PE LG D++S G++M
Sbjct: 183 TPCY-TPYYVAPEVLGPEKYDKS-CDMWSLGVIM 214
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHI---SDFGLARRIDTSHSHVS 253
+I++ + + YLH + I HRD+K N+L S I +DFG A+ TSH+ ++
Sbjct: 125 EIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHNSLT 181
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T T Y+ PE LG D++S G++M
Sbjct: 182 TPCY-TPYYVAPEVLGPEKYDKS-CDMWSLGVIM 213
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHI---SDFGLARRIDTSHSHVS 253
+I++ + + YLH + I HRD+K N+L S I +DFG A+ TSH+ ++
Sbjct: 119 EIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHNSLT 175
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T T Y+ PE LG D++S G++M
Sbjct: 176 TPCY-TPYYVAPEVLGPEKYDKS-CDMWSLGVIM 207
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHI---SDFGLARRIDTSHSHVS 253
+I++ + + YLH + I HRD+K N+L S I +DFG A+ TSH+ ++
Sbjct: 127 EIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHNSLT 183
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T T Y+ PE LG D++S G++M
Sbjct: 184 TPCY-TPYYVAPEVLGPEKYDKS-CDMWSLGVIM 215
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHI---SDFGLARRIDTSHSHVS 253
+I++ + + YLH + I HRD+K N+L S I +DFG A+ TSH+ ++
Sbjct: 121 EIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHNSLT 177
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T T Y+ PE LG D++S G++M
Sbjct: 178 TPCY-TPYYVAPEVLGPEKYDKS-CDMWSLGVIM 209
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 197 KIVRGVANGLAYLHGLEKPIIHRDIKSSNVLLDSDFEAHI---SDFGLARRIDTSHSHVS 253
+I++ + + YLH + I HRD+K N+L S I +DFG A+ TSH+ ++
Sbjct: 120 EIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHNSLT 176
Query: 254 TQVAGTMGYMPPEYLGGNTAATVMLDVYSFGILM 287
T T Y+ PE LG D++S G++M
Sbjct: 177 TPCY-TPYYVAPEVLGPEKYDKS-CDMWSLGVIM 208
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,572,676
Number of Sequences: 62578
Number of extensions: 431406
Number of successful extensions: 3585
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 1201
Number of HSP's gapped (non-prelim): 1142
length of query: 373
length of database: 14,973,337
effective HSP length: 100
effective length of query: 273
effective length of database: 8,715,537
effective search space: 2379341601
effective search space used: 2379341601
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)