BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043086
(257 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29136|MEP1_SOYBN Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2
Length = 305
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 122/238 (51%), Gaps = 39/238 (16%)
Query: 46 FQGTQKGDTVKGINALKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNL 105
F G KG++ +K Y H LGY+ N H D FD+ L SA+KTYQ+N+NL
Sbjct: 42 FTTYHPGQNYKGLSNVKNYFHHLGYIPNAPHF-------DDNFDDTLVSAIKTYQKNYNL 94
Query: 106 NPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPKWPATKQIISC 165
N TG D+ T+ + PRCGVPD+I T + + Y F+ P+W A ++
Sbjct: 95 NVTGKFDINTLKQIMTPRCGVPDIIINTNKTTS--FGMISDYTFFKDMPRWQAGTTQLTY 152
Query: 166 AFLPGTRTD----------------------VQEPDYDAADVKISFQRGDHGDGYPFDGP 203
AF P R D + Y+ A++KI F +HGD YPFDGP
Sbjct: 153 AFSPEPRLDDTFKSAIARAFSKWTPVVNIAFQETTSYETANIKILFASKNHGDPYPFDGP 212
Query: 204 GPYNLLAHSFPPTDGRFHYDGDENW------TVGAVPGAVDMQTVALHELRHVLGLAH 255
G +L H+F PTDGR H+D DE W T V A D+++VA+HE+ H+LGL H
Sbjct: 213 G--GILGHAFAPTDGRCHFDADEYWVASGDVTKSPVTSAFDLESVAVHEIGHLLGLGH 268
>sp|P09237|MMP7_HUMAN Matrilysin OS=Homo sapiens GN=MMP7 PE=1 SV=1
Length = 267
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 91/189 (48%), Gaps = 42/189 (22%)
Query: 91 NLESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFY 150
+LE+ +K Q+ F L TG ++ + + +M KPRCGVPDV Y +
Sbjct: 54 SLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPDV---------------AEYSLF 98
Query: 151 PGRPKWPA---TKQIISCAF-LPGTRTD-----------------VQEPDYDAADVKISF 189
P PKW + T +I+S LP D ++ + AD+ I F
Sbjct: 99 PNSPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVVWGTADIMIGF 158
Query: 190 QRGDHGDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHE 246
RG HGD YPFDGPG N LAH+F P G H+D DE WT G+ G ++ A HE
Sbjct: 159 ARGAHGDSYPFDGPG--NTLAHAFAPGTGLGGDAHFDEDERWTDGSSLG-INFLYAATHE 215
Query: 247 LRHVLGLAH 255
L H LG+ H
Sbjct: 216 LGHSLGMGH 224
>sp|O60882|MMP20_HUMAN Matrix metalloproteinase-20 OS=Homo sapiens GN=MMP20 PE=1 SV=3
Length = 483
Score = 100 bits (250), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 110/263 (41%), Gaps = 59/263 (22%)
Query: 17 LQFFLLHALASASNTNSNRKSSPLEFFKLFQGTQKGDTVKGINALKKYLHTLGYLSNHNH 76
L FL+ AL ++ S +SP + ++ Q L KY Y + H
Sbjct: 9 LAVFLIMALKFSTAAPSLVAASPRTWRNNYRLAQA--------YLDKY-----YTNKEGH 55
Query: 77 NHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRM 136
A G ++ +K Q F L TG +D T++++ KPRCGVPDV N
Sbjct: 56 QIGEMVARGS---NSMIRKIKELQAFFGLQVTGKLDQTTMNVIKKPRCGVPDVAN----- 107
Query: 137 QGGPAHYHTHYVFYPGRPKWPATKQIISCAFLPGTRTDVQ-------------------- 176
Y +PG PKW + + + V+
Sbjct: 108 ----------YRLFPGEPKWKKNTLTYRISKYTPSMSSVEVDKAVEMALQAWSSAVPLSF 157
Query: 177 -EPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSFPPTD---GRFHYDGDENWTVGA 232
+ AD+ ISF+ GDHGD YPFD GP LAH+F P + G H+D E WT+G
Sbjct: 158 VRINSGEADIMISFENGDHGDSYPFD--GPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGT 215
Query: 233 VPGAVDMQTVALHELRHVLGLAH 255
++ TVA HE H LGLAH
Sbjct: 216 --NGFNLFTVAAHEFGHALGLAH 236
>sp|O55123|MMP10_MOUSE Stromelysin-2 OS=Mus musculus GN=Mmp10 PE=2 SV=1
Length = 476
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 88/173 (50%), Gaps = 21/173 (12%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFY----- 150
++ Q+ L TG +D T+ +M KPRCGVPDV G + G P +H +
Sbjct: 64 IQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPDV-GGFSTFPGSPKWRKSHITYRIVNYT 122
Query: 151 PGRPKWPATKQI-----ISCAFLPGTRTDVQEPDYDAADVKISFQRGDHGDGYPFDGPGP 205
P P+ I + P T + + E + AD+ ISF G+HGD YPFDGPG
Sbjct: 123 PDLPRQSVDSAIEKALKVWEEVTPLTFSRISEGE---ADIMISFAVGEHGDFYPFDGPG- 178
Query: 206 YNLLAHSFPPTDGRF---HYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
LAH++PP G + H+D DE WT+ P ++ VA HEL H LGL H
Sbjct: 179 -QSLAHAYPPGPGFYGDVHFDDDEKWTLA--PSGTNLFLVAAHELGHSLGLFH 228
>sp|O18767|MMP20_BOVIN Matrix metalloproteinase-20 OS=Bos taurus GN=MMP20 PE=1 SV=1
Length = 481
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 85/184 (46%), Gaps = 43/184 (23%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPK 155
+K Q F L TG +D T+ ++ +PRCGVPDV N Y +PG PK
Sbjct: 70 IKELQEFFGLRVTGKLDRATMDVIKRPRCGVPDVAN---------------YRLFPGEPK 114
Query: 156 W-----------------PA----TKQIISCAFLPGTRTDVQEPDYDAADVKISFQRGDH 194
W PA ++ A+ + + AD+ ISF+ GDH
Sbjct: 115 WKKNTLTYRISKYTPSMTPAEVDRAMEMALRAWSSAVPLNFVRINAGEADIMISFETGDH 174
Query: 195 GDGYPFDGPGPYNLLAHSFPPTD---GRFHYDGDENWTVGAVPGAVDMQTVALHELRHVL 251
GD YPFD GP LAH+F P + G H+D E WT+G ++ TVA HE H L
Sbjct: 175 GDSYPFD--GPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGT--NGFNLFTVAAHEFGHAL 230
Query: 252 GLAH 255
GLAH
Sbjct: 231 GLAH 234
>sp|P79287|MMP20_PIG Matrix metalloproteinase-20 OS=Sus scrofa GN=MMP20 PE=2 SV=1
Length = 483
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 86/194 (44%), Gaps = 53/194 (27%)
Query: 91 NLESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFY 150
++ +K Q F L TG +D T+ ++ +PRCGVPDV N Y +
Sbjct: 67 SMVKKIKELQAFFGLRVTGKLDRTTMDVIKRPRCGVPDVAN---------------YRLF 111
Query: 151 PGRPKWP--------------------------ATKQIISCAFLPGTRTDVQEPDYDAAD 184
PG PKW A + S L R + E AD
Sbjct: 112 PGEPKWKKNTLTYRISKYTPSMTPAEVDKAMEMALQAWSSAVPLSFVRVNAGE-----AD 166
Query: 185 VKISFQRGDHGDGYPFDGPGPYNLLAHSFPPTD---GRFHYDGDENWTVGAVPGAVDMQT 241
+ ISF+ GDHGD YPFD GP LAH+F P + G H+D E WT+G ++ T
Sbjct: 167 IMISFETGDHGDSYPFD--GPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGM--NGFNLFT 222
Query: 242 VALHELRHVLGLAH 255
VA HE H LGLAH
Sbjct: 223 VAAHEFGHALGLAH 236
>sp|P57748|MMP20_MOUSE Matrix metalloproteinase-20 OS=Mus musculus GN=Mmp20 PE=2 SV=1
Length = 482
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 89/186 (47%), Gaps = 47/186 (25%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPK 155
+K Q F L TG +D T++++ KPRCGVPDV N Y +PG PK
Sbjct: 71 IKELQIFFGLKVTGKLDQNTMNVIKKPRCGVPDVAN---------------YRLFPGEPK 115
Query: 156 WPATKQIIS---CAFLPG-TRTDVQEPDYDA-------------------ADVKISFQRG 192
W K I++ + P + T+V + A AD+ ISF+ G
Sbjct: 116 W--KKNILTYRISKYTPSMSPTEVDKAIQMALHAWSTAVPLNFVRINSGEADIMISFETG 173
Query: 193 DHGDGYPFDGPGPYNLLAHSFPPTD---GRFHYDGDENWTVGAVPGAVDMQTVALHELRH 249
DHGD YPFD GP LAH+F P + G H+D E WT+G ++ TVA HE H
Sbjct: 174 DHGDSYPFD--GPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGT--NGFNLFTVAAHEFGH 229
Query: 250 VLGLAH 255
LGL H
Sbjct: 230 ALGLGH 235
>sp|Q6Y4Q5|MMP3_CANFA Stromelysin-1 OS=Canis familiaris GN=MMP3 PE=2 SV=1
Length = 478
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 89/176 (50%), Gaps = 27/176 (15%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFY----- 150
++ Q+ L TG +D T++MM +PRCGVPDV + TT G P TH +
Sbjct: 64 IREMQKFLGLEVTGKVDSDTLAMMRRPRCGVPDVGDFTT-FPGMPKWRKTHLTYRIMNYT 122
Query: 151 PGRPKWPATKQIISCAF--------LPGTRTDVQEPDYDAADVKISFQRGDHGDGYPFDG 202
P P+ A I A L +RTD E AD+KISF DHGD PFDG
Sbjct: 123 PDLPR-DAVDSAIEKALNVWKEVTPLTFSRTDEGE-----ADIKISFAVRDHGDFNPFDG 176
Query: 203 PGPYNLLAHSFPPTDGRF---HYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
PG N+L H++PP G + H+D DE WT ++ VA HEL H LGL H
Sbjct: 177 PG--NVLGHAYPPGPGIYGDAHFDDDEQWTSDT--SGTNLFLVAAHELGHSLGLFH 228
>sp|P91953|HE_HEMPU 50 kDa hatching enzyme OS=Hemicentrotus pulcherrimus PE=1 SV=1
Length = 591
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 91 NLESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVF- 149
N SA+ YQ+N +N TG +D +T +++ PRCGVPD++ T P + Y F
Sbjct: 129 NYTSAILEYQQNGGINQTGILDAETAALLDTPRCGVPDILPYVTGGIAWPRNVAVTYSFG 188
Query: 150 -YPGRPKWPATKQIISCAFL----PGTRTDVQEPDYDAADVKISFQRGDHGDGYPFDGPG 204
A K + AF + T + D + D++I F +HGDG FDG G
Sbjct: 189 TLSNDLSQTAIKNELRRAFQVWDDVSSLTFREVVDSSSVDIRIKFGSYEHGDGISFDGQG 248
Query: 205 PYNLLAHSFPPTDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
+LAH+F P +G H+D E WT+G G ++ VA HE H LGL H
Sbjct: 249 --GVLAHAFLPRNGDAHFDDSERWTIGTNSGT-NLFQVAAHEFGHSLGLYH 296
>sp|P07152|MMP10_RAT Stromelysin-2 OS=Rattus norvegicus GN=Mmp10 PE=2 SV=1
Length = 476
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 86/173 (49%), Gaps = 21/173 (12%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPK 155
++ Q+ L TG +D TV MM KPRCGVPDV G + G P H +
Sbjct: 64 IEEMQKFLGLEMTGKLDSNTVEMMHKPRCGVPDV-GGFSTFPGSPKWRKNHISYRIVNYT 122
Query: 156 WPATKQIISCAF----------LPGTRTDVQEPDYDAADVKISFQRGDHGDGYPFDGPGP 205
++ + A P T + + E + AD+ ISF G+HGD YPFDG G
Sbjct: 123 LDLPRESVDSAIERALKVWEEVTPLTFSRISEGE---ADIMISFAVGEHGDFYPFDGVG- 178
Query: 206 YNLLAHSFPPTDGRF---HYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
LAH++PP G + H+D DE W++G P ++ VA HEL H LGL H
Sbjct: 179 -QSLAHAYPPGPGFYGDAHFDDDEKWSLG--PSGTNLFLVAAHELGHSLGLFH 228
>sp|P50280|MMP7_RAT Matrilysin OS=Rattus norvegicus GN=Mmp7 PE=2 SV=1
Length = 267
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 97/221 (43%), Gaps = 57/221 (25%)
Query: 59 NALKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKTVSM 118
N L+K+ YL + A +A D ++ Q+ F L TG + + + +
Sbjct: 40 NYLRKF-----YLHDSKTKKATSAVD----------KLREMQKFFGLPETGKLSPRVMEI 84
Query: 119 MGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPKW---PATKQIIS-CAFLPGTRTD 174
M KPRCGVPDV + P PKW T +I+S LP D
Sbjct: 85 MQKPRCGVPDV---------------AEFSLMPNSPKWHSRTVTYRIVSYTTDLPRFLVD 129
Query: 175 -----------VQEP------DYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSFPP-- 215
+Q P + AD+ I F RGDHGD +PFDGPG N L H+F P
Sbjct: 130 QIVKRALRMWSMQIPLNFKRVSWGTADIIIGFARGDHGDNFPFDGPG--NTLGHAFAPGP 187
Query: 216 -TDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
G H+D DE WT G G V+ VA HEL H LGL H
Sbjct: 188 GLGGDAHFDKDEYWTDGEDSG-VNFLFVATHELGHSLGLGH 227
>sp|P28862|MMP3_MOUSE Stromelysin-1 OS=Mus musculus GN=Mmp3 PE=2 SV=2
Length = 477
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 53 DTVKGINALKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESA-----VKTYQRNFNLNP 107
D G+ L+KYL N+ A D F + +S+ ++ Q+ L
Sbjct: 26 DDDAGMELLQKYLE----------NYYGLAKDVKQFIKKKDSSLIVKKIQEMQKFLGLEM 75
Query: 108 TGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFY-----PGRPKWPATKQI 162
TG +D T+ +M KPRCGVPDV G + G P +H + P P+ I
Sbjct: 76 TGKLDSNTMELMHKPRCGVPDV-GGFSTFPGSPKWRKSHITYRIVNYTPDLPRQSVDSAI 134
Query: 163 -----ISCAFLPGTRTDVQEPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSFPP-- 215
+ P T + + E + AD+ ISF G+HGD PFDGPG +LAH++ P
Sbjct: 135 EKALKVWEEVTPLTFSRISEGE---ADIMISFAVGEHGDFVPFDGPG--TVLAHAYAPGP 189
Query: 216 -TDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
+G H+D DE WT ++ VA HEL H LGL H
Sbjct: 190 GINGDAHFDDDERWTEDVT--GTNLFLVAAHELGHSLGLYH 228
>sp|P28053|MMP1_BOVIN Interstitial collagenase OS=Bos taurus GN=MMP1 PE=1 SV=1
Length = 469
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 58 INALKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKTVS 117
+ +KKYL Y N N +G E L K Q+ F L TG D +T++
Sbjct: 31 VETVKKYLENY-YNLNSNGKKVERQRNGGLITEKL----KQMQKFFGLRVTGKPDAETLN 85
Query: 118 MMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPKWPATK----------------- 160
+M +PRCGVPDV +V PG+ W T
Sbjct: 86 VMKQPRCGVPDV---------------APFVLTPGKSCWENTNLTYRIENYTPDLSRADV 130
Query: 161 -QIISCAF------LPGTRTDVQEPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSF 213
Q I AF P T T V E AD+ ISF RGDH D PFDGPG LAH+F
Sbjct: 131 DQAIEKAFQLWSNVTPLTFTKVSE---GQADIMISFVRGDHRDNSPFDGPG--GNLAHAF 185
Query: 214 PP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
P G H+D DE WT ++ VA HE H LGLAH
Sbjct: 186 QPGAGIGGDAHFDDDEWWTSNF--QDYNLYRVAAHEFGHSLGLAH 228
>sp|P03956|MMP1_HUMAN Interstitial collagenase OS=Homo sapiens GN=MMP1 PE=1 SV=3
Length = 469
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 56 KGINALKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKT 115
+ ++ ++KYL L N G ++ +K Q F L TG D +T
Sbjct: 29 QDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEK-----LKQMQEFFGLKVTGKPDAET 83
Query: 116 VSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFY-----PGRPKWPATKQIISCAF--- 167
+ +M +PRCGVPDV +G P TH + P P+ I AF
Sbjct: 84 LKVMKQPRCGVPDVAQFVL-TEGNPRWEQTHLTYRIENYTPDLPR-ADVDHAIEKAFQLW 141
Query: 168 ---LPGTRTDVQEPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSFPP---TDGRFH 221
P T T V E AD+ ISF RGDH D PFDGPG LAH+F P G H
Sbjct: 142 SNVTPLTFTKVSE---GQADIMISFVRGDHRDNSPFDGPG--GNLAHAFQPGPGIGGDAH 196
Query: 222 YDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
+D DE WT ++ VA HEL H LGL+H
Sbjct: 197 FDEDERWTNNF--REYNLHRVAAHELGHSLGLSH 228
>sp|Q9XSZ5|MMP1_HORSE Interstitial collagenase OS=Equus caballus GN=MMP1 PE=2 SV=1
Length = 469
Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 100/217 (46%), Gaps = 38/217 (17%)
Query: 58 INALKKYLHTLGYLSNHNHNHAAAAADGDYFDEN-----LESAVKTYQRNFNLNPTGHMD 112
+ ++KYL N+ +DG+ ++ + +K Q F L TG D
Sbjct: 31 VEMVQKYLE----------NYYNLKSDGEQIEKQRHRSPVVEKLKQMQEFFGLKVTGKPD 80
Query: 113 LKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFY-----PGRPKWPATKQIISCAF 167
+T+++M +PRCGVPDV +G P +TH + P P+ Q I AF
Sbjct: 81 AETLNVMKQPRCGVPDVAEFVL-TEGNPRWENTHLTYRIENYTPDLPR-ADVDQAIEKAF 138
Query: 168 L------PGTRTDVQEPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSFPP---TDG 218
P T T V E AD+ ISF RGDH D PFDGPG LAH+F P G
Sbjct: 139 QLWSNVSPLTFTKVSE---GQADIMISFVRGDHRDNSPFDGPG--GNLAHAFQPGPRIGG 193
Query: 219 RFHYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
H+D DE WT ++ VA HE H LGL+H
Sbjct: 194 DAHFDEDETWTSNF--RNYNLYRVAAHEFGHSLGLSH 228
>sp|Q9Y5R2|MMP24_HUMAN Matrix metalloproteinase-24 OS=Homo sapiens GN=MMP24 PE=2 SV=1
Length = 645
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 104/223 (46%), Gaps = 35/223 (15%)
Query: 57 GINALKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKTV 116
G N LK Y + L Y S + H+A A L+SAV T Q+ + + TG +D T+
Sbjct: 81 GQNWLKSYGYLLPYDSRASALHSAKA---------LQSAVSTMQQFYGIPVTGVLDQTTI 131
Query: 117 SMMGKPRCGVPDVINGTTRMQGGP--------AHYHTHYVFYPGRPKWPA--TKQIISCA 166
M KPRCGVPD + + R + H Y + PK T++ I A
Sbjct: 132 EWMKKPRCGVPDHPHLSRRRRNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQA 191
Query: 167 F------LPGTRTDVQ----EPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSF--- 213
F P T +V + D AD+ I F G HGD PFDG G LAH++
Sbjct: 192 FDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEG--GFLAHAYFPG 249
Query: 214 PPTDGRFHYDGDENWTVG-AVPGAVDMQTVALHELRHVLGLAH 255
P G H+D DE WT+G A D+ VA+HEL H LGL H
Sbjct: 250 PGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEH 292
>sp|P21692|MMP1_PIG Interstitial collagenase OS=Sus scrofa GN=MMP1 PE=1 SV=2
Length = 469
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 85/187 (45%), Gaps = 49/187 (26%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPK 155
+K Q+ F L TG D +T+++M +PRCGVPDV +V PG P+
Sbjct: 64 LKQMQQFFGLKVTGKPDAETLNVMKQPRCGVPDV---------------AEFVLTPGNPR 108
Query: 156 WPAT------------------KQIISCAFL------PGTRTDVQEPDYDAADVKISFQR 191
W T + I AF P T T V E AD+ ISF R
Sbjct: 109 WENTHLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVSE---GQADIMISFVR 165
Query: 192 GDHGDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHELR 248
GDH D PFDGPG LAH+F P G H+D DE WT ++ VA HEL
Sbjct: 166 GDHRDNSPFDGPG--GNLAHAFQPGPGIGGDAHFDEDERWTKNF--RDYNLYRVAAHELG 221
Query: 249 HVLGLAH 255
H LGL+H
Sbjct: 222 HSLGLSH 228
>sp|Q9R0S2|MMP24_MOUSE Matrix metalloproteinase-24 OS=Mus musculus GN=Mmp24 PE=1 SV=2
Length = 618
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 103/223 (46%), Gaps = 35/223 (15%)
Query: 57 GINALKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKTV 116
G N LK Y + L Y S + H+ A L+SAV T Q+ + + TG +D T+
Sbjct: 54 GQNWLKSYGYLLPYESRASALHSGKA---------LQSAVSTMQQFYGIPVTGVLDQTTI 104
Query: 117 SMMGKPRCGVPDVINGTTRMQGGP--------AHYHTHYVFYPGRPKWPA--TKQIISCA 166
M KPRCGVPD + + R + H Y + PK T++ I A
Sbjct: 105 EWMKKPRCGVPDHPHLSRRRRNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQA 164
Query: 167 F------LPGTRTDVQ----EPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSF--- 213
F P T +V + D AD+ I F G HGD PFDG G LAH++
Sbjct: 165 FDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEG--GFLAHAYFPG 222
Query: 214 PPTDGRFHYDGDENWTVG-AVPGAVDMQTVALHELRHVLGLAH 255
P G H+D DE WT+G A D+ VA+HEL H LGL H
Sbjct: 223 PGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEH 265
>sp|Q99PW6|MMP24_RAT Matrix metalloproteinase-24 OS=Rattus norvegicus GN=Mmp24 PE=2 SV=1
Length = 618
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 103/223 (46%), Gaps = 35/223 (15%)
Query: 57 GINALKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKTV 116
G N LK Y + L Y S + H+ A L+SAV T Q+ + + TG +D T+
Sbjct: 54 GQNWLKSYGYLLPYESRASALHSGKA---------LQSAVSTMQQFYGIPVTGVLDQTTI 104
Query: 117 SMMGKPRCGVPDVINGTTRMQGGP--------AHYHTHYVFYPGRPKWPA--TKQIISCA 166
M KPRCGVPD + + R + H Y + PK T++ I A
Sbjct: 105 EWMKKPRCGVPDHPHLSRRRRNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQA 164
Query: 167 F------LPGTRTDVQ----EPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSF--- 213
F P T +V + D AD+ I F G HGD PFDG G LAH++
Sbjct: 165 FDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEG--GFLAHAYFPG 222
Query: 214 PPTDGRFHYDGDENWTVG-AVPGAVDMQTVALHELRHVLGLAH 255
P G H+D DE WT+G A D+ VA+HEL H LGL H
Sbjct: 223 PGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEH 265
>sp|Q10738|MMP7_MOUSE Matrilysin OS=Mus musculus GN=Mmp7 PE=2 SV=1
Length = 264
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 85/189 (44%), Gaps = 42/189 (22%)
Query: 91 NLESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFY 150
+L +K Q+ F L TG + + +M KPRCGVPDV Y
Sbjct: 54 SLVDNLKEMQKFFGLPMTGKLSPYIMEIMQKPRCGVPDV---------------AEYSLM 98
Query: 151 PGRPKW---PATKQIIS-CAFLPGTRTD-----------VQEP------DYDAADVKISF 189
P PKW T +I+S + LP D +Q P + AD+ I F
Sbjct: 99 PNSPKWHSRIVTYRIVSYTSDLPRIVVDQIVKKALRMWSMQIPLNFKRVSWGTADIIIGF 158
Query: 190 QRGDHGDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHE 246
R DHGD +PFDGPG N L H+F P G H+D DE WT G G V+ A HE
Sbjct: 159 ARRDHGDSFPFDGPG--NTLGHAFAPGPGLGGDAHFDKDEYWTDGEDAG-VNFLFAATHE 215
Query: 247 LRHVLGLAH 255
H LGL+H
Sbjct: 216 FGHSLGLSH 224
>sp|Q28397|MMP3_HORSE Stromelysin-1 OS=Equus caballus GN=MMP3 PE=2 SV=1
Length = 477
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 89/184 (48%), Gaps = 43/184 (23%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPK 155
++ Q+ L TG +D TV +M K RCGVPDV H+ +PG PK
Sbjct: 64 IQEMQKFLGLKVTGKLDSDTVEVMHKSRCGVPDV---------------GHFTTFPGMPK 108
Query: 156 WPAT----KQIISCAFLP--GTRTDVQEP--------------DYDA-ADVKISFQRGDH 194
W T + + LP +DV++ Y+ AD+ I+F +H
Sbjct: 109 WSKTHLTYRIVNYTQDLPRDAVDSDVEKALKIWEEVTPLTFSRIYEGEADIMITFAVREH 168
Query: 195 GDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVL 251
GD +PFDGPG +LAH++PP +G H+D DE+WT A ++ VA HEL H L
Sbjct: 169 GDFFPFDGPG--KVLAHAYPPGPGMNGDAHFDDDEHWTKDA--SGINFLLVAAHELGHSL 224
Query: 252 GLAH 255
GL H
Sbjct: 225 GLYH 228
>sp|P22757|HE_PARLI Hatching enzyme OS=Paracentrotus lividus PE=1 SV=1
Length = 587
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 49 TQKGDTVKGINALKKYLHTLGYLSNHNHNHAAAAADGDYFDE---NLESAVKTYQRNFNL 105
++G + LK +L GY G F E N SA+ +Q + +
Sbjct: 92 VEEGVHESNVEILKAHLEKFGY-----------TPPGSTFGEANLNYTSAILDFQEHGGI 140
Query: 106 NPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVF--YPGRPKWPATKQII 163
N TG +D T ++ PRCGVPDV+ T + Y F K I
Sbjct: 141 NQTGILDADTAELLSTPRCGVPDVLPFVTSSITWSRNQPVTYSFGALTSDLNQNDVKDEI 200
Query: 164 SCAFLPGTRTDV------QEPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSFPPTD 217
AF DV + PD + D++I F DHGDG FDG G +LAH+F P +
Sbjct: 201 RRAFR--VWDDVSGLSFREVPDTTSVDIRIKFGSYDHGDGISFDGRG--GVLAHAFLPRN 256
Query: 218 GRFHYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
G H+D E WT G G ++ VA HE H LGL H
Sbjct: 257 GDAHFDDSETWTEGTRSGT-NLFQVAAHEFGHSLGLYH 293
>sp|P08254|MMP3_HUMAN Stromelysin-1 OS=Homo sapiens GN=MMP3 PE=1 SV=2
Length = 477
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 87/187 (46%), Gaps = 49/187 (26%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPK 155
++ Q+ L TG +D T+ +M KPRCGVPDV H+ T +PG PK
Sbjct: 64 IREMQKFLGLEVTGKLDSDTLEVMRKPRCGVPDV-----------GHFRT----FPGIPK 108
Query: 156 WPAT--------------KQIISCAF----------LPGTRTDVQEPDYDAADVKISFQR 191
W T K + A P T + + E + AD+ ISF
Sbjct: 109 WRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGE---ADIMISFAV 165
Query: 192 GDHGDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHELR 248
+HGD YPFDGPG N+LAH++ P +G H+D DE WT ++ VA HE+
Sbjct: 166 REHGDFYPFDGPG--NVLAHAYAPGPGINGDAHFDDDEQWTKDTT--GTNLFLVAAHEIG 221
Query: 249 HVLGLAH 255
H LGL H
Sbjct: 222 HSLGLFH 228
>sp|P03957|MMP3_RAT Stromelysin-1 OS=Rattus norvegicus GN=Mmp3 PE=1 SV=1
Length = 475
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 98/217 (45%), Gaps = 36/217 (16%)
Query: 57 GINALKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESA-----VKTYQRNFNLNPTGHM 111
G+ L+KYL N+ D F + +S+ ++ Q+ L TG +
Sbjct: 28 GMEVLQKYLE----------NYYGLEKDVKQFTKKKDSSPVVKKIQEMQKFLGLKMTGKL 77
Query: 112 DLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPKWPATKQIISCAF---- 167
D T+ +M KPRCGVPDV G + G P H + ++ + A
Sbjct: 78 DSNTMELMHKPRCGVPDV-GGFSTFPGSPKWRKNHISYRIVNYTLDLPRESVDSAIERAL 136
Query: 168 ------LPGTRTDVQEPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSFPP---TDG 218
P T + + E + AD+ ISF +HGD PFDGPG +LAH++ P T+G
Sbjct: 137 KVWEEVTPLTFSRISEGE---ADIMISFAVEEHGDFIPFDGPG--MVLAHAYAPGPGTNG 191
Query: 219 RFHYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
H+D DE WT ++ VA HEL H LGL H
Sbjct: 192 DAHFDDDERWTDDVT--GTNLFLVAAHELGHSLGLFH 226
>sp|P09238|MMP10_HUMAN Stromelysin-2 OS=Homo sapiens GN=MMP10 PE=1 SV=1
Length = 476
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 85/192 (44%), Gaps = 44/192 (22%)
Query: 89 DENL-ESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHY 147
D NL ++ Q+ L TG +D T+ +M KPRCGVPDV H+
Sbjct: 55 DSNLIVKKIQGMQKFLGLEVTGKLDTDTLEVMRKPRCGVPDV---------------GHF 99
Query: 148 VFYPGRPKWPATKQIISCA-FLPGTRTDVQEPDYD--------------------AADVK 186
+PG PKW T + P D + + AD+
Sbjct: 100 SSFPGMPKWRKTHLTYRIVNYTPDLPRDAVDSAIEKALKVWEEVTPLTFSRLYEGEADIM 159
Query: 187 ISFQRGDHGDGYPFDGPGPYNLLAHSFPPTDGRF---HYDGDENWTVGAVPGAVDMQTVA 243
ISF +HGD Y FDGPG + LAH++PP G + H+D DE WT A ++ VA
Sbjct: 160 ISFAVKEHGDFYSFDGPG--HSLAHAYPPGPGLYGDIHFDDDEKWTEDA--SGTNLFLVA 215
Query: 244 LHELRHVLGLAH 255
HEL H LGL H
Sbjct: 216 AHELGHSLGLFH 227
>sp|P22894|MMP8_HUMAN Neutrophil collagenase OS=Homo sapiens GN=MMP8 PE=1 SV=1
Length = 467
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 84/184 (45%), Gaps = 43/184 (23%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPK 155
+K QR F LN TG + +T+ MM KPRCGVPD GG ++ PG PK
Sbjct: 63 LKEMQRFFGLNVTGKPNEETLDMMKKPRCGVPD--------SGG-------FMLTPGNPK 107
Query: 156 WPATKQIISCA-FLPG-TRTDVQEPDYDA-------------------ADVKISFQRGDH 194
W T + P + +V+ DA AD+ I+F + DH
Sbjct: 108 WERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDH 167
Query: 195 GDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVL 251
GD PFDGP +LAH+F P G H+D +E WT ++ VA HE H L
Sbjct: 168 GDNSPFDGPN--GILAHAFQPGQGIGGDAHFDAEETWT--NTSANYNLFLVAAHEFGHSL 223
Query: 252 GLAH 255
GLAH
Sbjct: 224 GLAH 227
>sp|Q9WTR0|MMP16_MOUSE Matrix metalloproteinase-16 OS=Mus musculus GN=Mmp16 PE=2 SV=3
Length = 607
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 100/221 (45%), Gaps = 33/221 (14%)
Query: 61 LKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKTVSMMG 120
++ +L GYL + + + E ++SA+ Q+ + +N TG +D T+ M
Sbjct: 43 VEVWLQKYGYLPPTDPRMSVLRSA-----ETMQSALAAMQQFYGINMTGKVDRNTIDWMK 97
Query: 121 KPRCGVPDVINGTTRMQGGPAHY----------HTHYVFYPGRPKW--PATKQIISCAF- 167
KPRCGVPD G+++ Y H Y PK P T++ I AF
Sbjct: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFD 157
Query: 168 -----LPGTRTDVQEPDYD----AADVKISFQRGDHGDGYPFDGPGPYNLLAHSF---PP 215
P T +V + + D+ I F G HGD PFDG G LAH++ P
Sbjct: 158 VWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEG--GFLAHAYFPGPG 215
Query: 216 TDGRFHYDGDENWTVGAVP-GAVDMQTVALHELRHVLGLAH 255
G H+D DE WT+G D+ VA+HEL H LGL H
Sbjct: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEH 256
>sp|P51512|MMP16_HUMAN Matrix metalloproteinase-16 OS=Homo sapiens GN=MMP16 PE=1 SV=2
Length = 607
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 100/221 (45%), Gaps = 33/221 (14%)
Query: 61 LKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKTVSMMG 120
++ +L GYL + + + E ++SA+ Q+ + +N TG +D T+ M
Sbjct: 43 VEVWLQKYGYLPPTDPRMSVLRSA-----ETMQSALAAMQQFYGINMTGKVDRNTIDWMK 97
Query: 121 KPRCGVPDVINGTTRMQGGPAHY----------HTHYVFYPGRPKW--PATKQIISCAF- 167
KPRCGVPD G+++ Y H Y PK P T++ I AF
Sbjct: 98 KPRCGVPDQTRGSSKFHIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFD 157
Query: 168 -----LPGTRTDVQEPDYD----AADVKISFQRGDHGDGYPFDGPGPYNLLAHSF---PP 215
P T +V + + D+ I F G HGD PFDG G LAH++ P
Sbjct: 158 VWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEG--GFLAHAYFPGPG 215
Query: 216 TDGRFHYDGDENWTVGAVP-GAVDMQTVALHELRHVLGLAH 255
G H+D DE WT+G D+ VA+HEL H LGL H
Sbjct: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEH 256
>sp|O35548|MMP16_RAT Matrix metalloproteinase-16 OS=Rattus norvegicus GN=Mmp16 PE=2 SV=1
Length = 607
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 100/221 (45%), Gaps = 33/221 (14%)
Query: 61 LKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKTVSMMG 120
++ +L GYL + + + E ++SA+ Q+ + +N TG +D T+ M
Sbjct: 43 VEVWLQKYGYLPPTDPRMSVLRSA-----ETMQSALAAMQQFYGINMTGKVDRNTIDWMK 97
Query: 121 KPRCGVPDVINGTTRMQGGPAHY----------HTHYVFYPGRPKW--PATKQIISCAF- 167
KPRCGVPD G+++ Y H Y PK P T++ I AF
Sbjct: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFD 157
Query: 168 -----LPGTRTDVQEPDYD----AADVKISFQRGDHGDGYPFDGPGPYNLLAHSF---PP 215
P T +V + + D+ I F G HGD PFDG G LAH++ P
Sbjct: 158 VWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDRSPFDGEG--GFLAHAYFPGPG 215
Query: 216 TDGRFHYDGDENWTVGAVP-GAVDMQTVALHELRHVLGLAH 255
G H+D DE WT+G D+ VA+HEL H LGL H
Sbjct: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEH 256
>sp|P13943|MMP1_RABIT Interstitial collagenase OS=Oryctolagus cuniculus GN=MMP1 PE=2 SV=1
Length = 468
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 81/187 (43%), Gaps = 49/187 (26%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPK 155
+K Q F L TG D +T+ MM +PRCGVPDV +V PG P+
Sbjct: 63 LKQMQEFFGLKVTGKPDAETLKMMKQPRCGVPDV---------------AQFVLTPGNPR 107
Query: 156 WPAT------------------KQIISCAF------LPGTRTDVQEPDYDAADVKISFQR 191
W T I AF P T T V + AD+ ISF R
Sbjct: 108 WEQTHLTYRIENYTPDLSRADVDNAIEKAFQLWSNVTPLTFTKVSK---GQADIMISFVR 164
Query: 192 GDHGDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHELR 248
GDH D PFDGP LAH+F P G H+D D+ WT ++ VA HEL
Sbjct: 165 GDHRDNSPFDGPE--GQLAHAFQPGLGIGGDVHFDEDDRWTKDF--RNYNLYRVAAHELG 220
Query: 249 HVLGLAH 255
H LGL+H
Sbjct: 221 HSLGLSH 227
>sp|Q9NPA2|MMP25_HUMAN Matrix metalloproteinase-25 OS=Homo sapiens GN=MMP25 PE=1 SV=1
Length = 562
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 53 DTVKGINALKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMD 112
D G++ L +Y GYL + A + E L A+K QR L TG MD
Sbjct: 28 DVSLGVDWLTRY----GYLPPPHPAQAQLQSP-----EKLRDAIKVMQRFAGLPETGRMD 78
Query: 113 LKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPKW-----PATKQI----- 162
TV+ M KPRC +PDV+ ++ + + V+ W P + Q+
Sbjct: 79 PGTVATMRKPRCSLPDVLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETV 138
Query: 163 ---ISCAFLPG------TRTDVQEPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHS- 212
+S A + T +V P D+ I F R H D YPFDG G LAH+
Sbjct: 139 RVLMSYALMAWGMESGLTFHEVDSPQGQEPDILIDFARAFHQDSYPFDGLG--GTLAHAF 196
Query: 213 FP---PTDGRFHYDGDENWTVGAVPG-AVDMQTVALHELRHVLGLAH 255
FP P G H+D +E WT G+ G D+ VA+HE H LGL H
Sbjct: 197 FPGEHPISGDTHFDDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGH 243
>sp|Q3U435|MMP25_MOUSE Matrix metalloproteinase-25 OS=Mus musculus GN=Mmp25 PE=2 SV=1
Length = 615
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 55 VKGINALKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLK 114
K ++ ++L GYL + HA + E L+ A+K QR L TG MD
Sbjct: 81 AKVVSMGVEWLTRYGYLPPADPVHAQMQSL-----EKLQDAIKVMQRFAGLPETGQMDPM 135
Query: 115 TVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPKWPA---------TKQIISC 165
T+ M KPRC +PDV+ ++ + + V+ W + QI+
Sbjct: 136 TIKTMRKPRCSLPDVLGAAGLVRRRRRYSLSGSVWKKRTLTWSIRSFSQKSQLSPQIVRT 195
Query: 166 ---------AFLPGTRTDVQEPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHS-FP- 214
A G Y D+ I F R H D YPFDG G LAH+ FP
Sbjct: 196 LLSYALAVWATESGLTFQEVNSQYQEPDIIIHFARAYHQDSYPFDGSG--GTLAHAFFPG 253
Query: 215 --PTDGRFHYDGDENWTVGAV-PGAVDMQTVALHELRHVLGLAH 255
P G H+D +E WT G+ +D+ VA+HE H LGL H
Sbjct: 254 EHPISGDTHFDDEETWTFGSTDDNGIDLFAVAVHEFGHALGLGH 297
>sp|P79227|MMP12_RABIT Macrophage metalloelastase OS=Oryctolagus cuniculus GN=MMP12 PE=2
SV=1
Length = 464
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 87/177 (49%), Gaps = 21/177 (11%)
Query: 92 LESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYP 151
+E V+ Q+ LN TG +D T+ MM KPRCGVPDV + T M G P + HY+ Y
Sbjct: 55 IEEKVQEMQQFLGLNVTGQLDTSTLEMMHKPRCGVPDVYHFKT-MPGRPV-WRKHYITYR 112
Query: 152 GRPKWPATKQ-----IISCAFLPGTRTDVQEPDYD-----AADVKISFQRGDHGDGYPFD 201
+ P K+ I AF +DV + AD+ I F G HGD FD
Sbjct: 113 IKNYTPDMKREDVEYAIQKAF--QVWSDVTPLKFRKITTGKADIMILFASGAHGDYGAFD 170
Query: 202 GPGPYNLLAHSF---PPTDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
G G ++AH+F P G H+D DE W+ ++ VA+HEL H LGL H
Sbjct: 171 GRG--GVIAHAFGPGPGIGGDTHFDEDEIWSKSY--KGTNLFLVAVHELGHALGLDH 223
>sp|O88766|MMP8_RAT Neutrophil collagenase OS=Rattus norvegicus GN=Mmp8 PE=2 SV=1
Length = 466
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 93/225 (41%), Gaps = 52/225 (23%)
Query: 56 KGINALKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKT 115
K + + YL +L ++ A A + +K QR F L TG D T
Sbjct: 31 KNMKTAENYLRKFYHLPSNQFRSARNAT-------MIAEKLKEMQRFFGLPETGKPDAAT 83
Query: 116 VSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPKWPAT---------------- 159
+ +M KPRCGVPD ++ PG PKW T
Sbjct: 84 IEIMEKPRCGVPD---------------SGDFLLTPGSPKWTHTNLTYRIINHTPQMSKA 128
Query: 160 --KQIISCAF----LPGTRTDVQEPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSF 213
K I AF +P T T E AD+ I+F DHGD PFDGP +LAH+F
Sbjct: 129 EVKTEIEKAFKIWSVPSTLT-FTETLEGEADINIAFVSRDHGDNSPFDGPN--GILAHAF 185
Query: 214 PP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
P G H+D +E WT + ++ VA HE H LGL+H
Sbjct: 186 QPGRGIGGDAHFDSEETWTQDS--KNYNLFLVAAHEFGHSLGLSH 228
>sp|Q10835|MMP13_XENLA Collagenase 3 (Fragment) OS=Xenopus laevis GN=mmp13 PE=2 SV=1
Length = 469
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 91/191 (47%), Gaps = 47/191 (24%)
Query: 91 NLESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFY 150
++E+ +K Q F L TG ++ T+ +M +PRCGVPDV Y F+
Sbjct: 61 SIETKLKEMQSFFGLEVTGKLNEDTLDIMKQPRCGVPDV---------------GQYNFF 105
Query: 151 PGRPKWP---ATKQIISCAFLPGTRT---------------DVQEPDYD-----AADVKI 187
P + KWP T +I++ + P T DV ++ AD+ +
Sbjct: 106 PRKLKWPRNNLTYRIVN--YTPDLSTSEVDRAIKKALKVWSDVTPLNFTRLRTGTADIMV 163
Query: 188 SFQRGDHGDGYPFDGPGPYNLLAHSFPPTD---GRFHYDGDENWTVGAVPGAVDMQTVAL 244
SF + +HGD YPFDGP LLAH+FPP + G H+D DE ++ ++ VA
Sbjct: 164 SFGKKEHGDYYPFDGPD--GLLAHAFPPGEKLGGDTHFDDDEMFSTDN--KGYNLFVVAA 219
Query: 245 HELRHVLGLAH 255
HE H LGL H
Sbjct: 220 HEFGHALGLDH 230
>sp|Q9EPL5|MMP1A_MOUSE Interstitial collagenase A OS=Mus musculus GN=Mmp1a PE=2 SV=1
Length = 464
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 56 KGINALKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKT 115
+ + + KYL N N A +G E + ++ Q+ F L TG+ D +T
Sbjct: 27 QNVETVWKYLENY---YNLGKNMQAKNVNGK---EMMAEKLRQMQQLFGLKVTGNSDPET 80
Query: 116 VSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYV-----FYPGRPKWPATKQIISCAF--- 167
+ M KPRCGVPDV P TH + P PK + I+ AF
Sbjct: 81 LRAMKKPRCGVPDVAPYAI-THNNPRWTKTHLTYSILNYTPYLPK-AVVEDAIARAFRVW 138
Query: 168 ---LPGTRTDVQEPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSFPP---TDGRFH 221
P T V E + D+ +SF RGDHGD PFDGP LAH+F P G H
Sbjct: 139 SDVTPLTFQRVFE---EEGDIVLSFHRGDHGDNNPFDGPN--YKLAHTFQPGPGLGGDVH 193
Query: 222 YDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
YD DE WT + ++ V HEL H LGL H
Sbjct: 194 YDLDETWTNSS--ENFNLFYVTAHELGHSLGLTH 225
>sp|P28863|MMP3_RABIT Stromelysin-1 OS=Oryctolagus cuniculus GN=MMP3 PE=2 SV=1
Length = 478
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 81/184 (44%), Gaps = 43/184 (23%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPK 155
++ Q+ L TG +D T+ ++ KPRCGVPDV H+ +PG PK
Sbjct: 65 IQEMQKFLGLEVTGKLDSNTLEVIRKPRCGVPDV---------------GHFSTFPGTPK 109
Query: 156 WPATKQIISCA-FLPGTRTDVQEPDYD--------------------AADVKISFQRGDH 194
W T + P D + + AD+ ISF +H
Sbjct: 110 WTKTHLTYRIVNYTPDLPRDAVDAAIEKALKVWEEVTPLTFSRKYEGEADIMISFGVREH 169
Query: 195 GDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVL 251
GD PFDGPG N+LAH++ P +G H+D DE WT ++ VA HEL H L
Sbjct: 170 GDFIPFDGPG--NVLAHAYAPGPGINGDAHFDDDEQWTKDTT--GTNLFLVAAHELGHSL 225
Query: 252 GLAH 255
GL H
Sbjct: 226 GLFH 229
>sp|O18927|MMP13_HORSE Collagenase 3 OS=Equus caballus GN=MMP13 PE=2 SV=1
Length = 472
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 82/184 (44%), Gaps = 43/184 (23%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPK 155
++ Q F L TG +D T+ +M KPRCGVPDV Y +P K
Sbjct: 69 LREMQSFFGLEVTGKLDDNTLDIMKKPRCGVPDV---------------GEYNVFPRTLK 113
Query: 156 WPA--------------TKQIISCAFLPGTR--TDVQEPDYD-----AADVKISFQRGDH 194
WP T + AF + +DV ++ AD+ ISF +H
Sbjct: 114 WPKMNLTYRIVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFTRLYNGTADIMISFGTKEH 173
Query: 195 GDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVL 251
GD YPFDGP LLAH+FPP G H+D DE WT + ++ VA HE H L
Sbjct: 174 GDFYPFDGPS--GLLAHAFPPGPNYGGDAHFDDDETWTSSS--KGYNLFLVAAHEFGHSL 229
Query: 252 GLAH 255
GL H
Sbjct: 230 GLDH 233
>sp|O13065|MMP18_XENLA Matrix metalloproteinase-18 OS=Xenopus laevis GN=mmp18 PE=2 SV=1
Length = 467
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 88 FDENLESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYH--T 145
F E LE Q+ F L TG +D KTV +M KPRCGV DV +T + T
Sbjct: 60 FTEKLEQM----QKFFGLKVTGTLDPKTVEVMEKPRCGVYDVGQYSTVAKSSAWQKKDLT 115
Query: 146 HYV--FYPGRPKWPATKQI-----ISCAFLPGTRTDVQEPDYDAADVKISFQRGDHGDGY 198
+ + F P P+ I + P T T + + +D++ISF GDH D
Sbjct: 116 YRILNFTPDLPQADVETAIQRAFKVWSDVTPLTFTRIYN---EVSDIEISFTAGDHKDNS 172
Query: 199 PFDGPGPYNLLAHSFPPTD---GRFHYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
PFDG G +LAH+F P + G H+D DE WT ++ VA HE H LGL+H
Sbjct: 173 PFDGSG--GILAHAFQPGNGIGGDAHFDEDETWT--KTSEIYNLFLVAAHEFGHSLGLSH 228
>sp|P39900|MMP12_HUMAN Macrophage metalloelastase OS=Homo sapiens GN=MMP12 PE=1 SV=1
Length = 470
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 92 LESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYP 151
++ ++ Q L TG +D T+ MM PRCGVPDV + M GGP + HY+ Y
Sbjct: 60 MKEKIQEMQHFLGLKVTGQLDTSTLEMMHAPRCGVPDV-HHFREMPGGPV-WRKHYITYR 117
Query: 152 GRPKWPATKQ-----IISCAFLPGTRT---DVQEPDYDAADVKISFQRGDHGDGYPFDGP 203
P + I AF + + + AD+ + F RG HGD + FDG
Sbjct: 118 INNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGK 177
Query: 204 GPYNLLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
G +LAH+F P G H+D DE WT + G ++ A+HE+ H LGL H
Sbjct: 178 G--GILAHAFGPGSGIGGDAHFDEDEFWTTHS--GGTNLFLTAVHEIGHSLGLGH 228
>sp|O70138|MMP8_MOUSE Neutrophil collagenase OS=Mus musculus GN=Mmp8 PE=2 SV=2
Length = 465
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 85/191 (44%), Gaps = 49/191 (25%)
Query: 92 LESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYP 151
+ +K QR F+L TG +D T+ +M PRCGVPD ++ P
Sbjct: 59 VAEKLKEMQRFFSLAETGKLDAATMGIMEMPRCGVPD---------------SGDFLLTP 103
Query: 152 GRPKWPAT------------------KQIISCAF------LPGTRTDVQEPDYDAADVKI 187
G PKW T K I AF P T T++ + + AD+ I
Sbjct: 104 GSPKWTHTNLTYRIINHTPQLSRAEVKTAIEKAFHVWSVASPLTFTEILQGE---ADINI 160
Query: 188 SFQRGDHGDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVAL 244
+F DHGD PFDGP +LAH+F P G H+D +E WT + ++ VA
Sbjct: 161 AFVSRDHGDNSPFDGPN--GILAHAFQPGQGIGGDAHFDSEETWTQDS--KNYNLFLVAA 216
Query: 245 HELRHVLGLAH 255
HE H LGL+H
Sbjct: 217 HEFGHSLGLSH 227
>sp|Q9R0S3|MMP17_MOUSE Matrix metalloproteinase-17 OS=Mus musculus GN=Mmp17 PE=1 SV=3
Length = 578
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 90 ENLESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTT----RMQGGPAHYHT 145
E L A+ Q+ L TG +D T+++M PRC +PD+ G R P +
Sbjct: 75 EELSKAITAMQQFGGLETTGILDEATLALMKTPRCSLPDLPPGAQSRRKRQTPPPTKWSK 134
Query: 146 HYVFYP----------GRPKWPATKQIISCAFLPGTRTDVQEPDYDAADVKISFQRGDHG 195
+ + GR A + T + E +AAD++I F + DH
Sbjct: 135 RNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDITPLNFHEVAGNAADIQIDFSKADHN 194
Query: 196 DGYPFDGPGPYNLLAHSFPPTD----GRFHYDGDENWTVGAVPG-AVDMQTVALHELRHV 250
DGYPFDGPG +AH+F P D G H+D DE WT + +D+ VA+HE H
Sbjct: 195 DGYPFDGPG--GTVAHAFFPGDHHTAGDTHFDDDEPWTFRSSDAHGMDLFAVAVHEFGHA 252
Query: 251 LGLAH 255
+GL+H
Sbjct: 253 IGLSH 257
>sp|P33435|MMP13_MOUSE Collagenase 3 OS=Mus musculus GN=Mmp13 PE=1 SV=1
Length = 472
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 82/184 (44%), Gaps = 43/184 (23%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPK 155
++ Q F L TG +D T+ +M KPRCGVPDV Y +P K
Sbjct: 69 LREMQSFFGLEVTGKLDDPTLDIMRKPRCGVPDV---------------GEYNVFPRTLK 113
Query: 156 WPATKQI--------------ISCAFLPGTR--TDVQEPDYD-----AADVKISFQRGDH 194
W T + AF + +DV ++ AD+ ISF +H
Sbjct: 114 WSQTNLTYRIVNYTPDMSHSEVEKAFRKAFKVWSDVTPLNFTRIYDGTADIMISFGTKEH 173
Query: 195 GDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVL 251
GD YPFDGP LLAH+FPP G H+D DE WT + ++ VA HEL H L
Sbjct: 174 GDFYPFDGPS--GLLAHAFPPGPNYGGDAHFDDDETWTSSS--KGYNLFIVAAHELGHSL 229
Query: 252 GLAH 255
GL H
Sbjct: 230 GLDH 233
>sp|P23097|MMP13_RAT Collagenase 3 (Fragment) OS=Rattus norvegicus GN=Mmp13 PE=1 SV=1
Length = 466
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDV--INGTTR-MQGGPAHYHTHYVFYPG 152
++ Q F L+ TG +D T+ +M KPRCGVPDV N R ++ + V Y
Sbjct: 63 LREMQSFFGLDVTGKLDDPTLDIMRKPRCGVPDVGVYNVFPRTLKWSQTNLTYRIVNYTP 122
Query: 153 RPKWPATKQIISCAFLPGTRTDVQEPDYD-----AADVKISFQRGDHGDGYPFDGPGPYN 207
++ AF +DV ++ AD+ ISF +HGD YPFDGP
Sbjct: 123 DISHSEVEKAFRKAF--KVWSDVTPLNFTRIHDGTADIMISFGTKEHGDFYPFDGPS--G 178
Query: 208 LLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
LLAH+FPP G H+D DE WT + ++ VA HEL H LGL H
Sbjct: 179 LLAHAFPPGPNLGGDAHFDDDETWTSSS--KGYNLFIVAAHELGHSLGLDH 227
>sp|O62806|MMP13_RABIT Collagenase 3 OS=Oryctolagus cuniculus GN=MMP13 PE=2 SV=1
Length = 471
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 91/219 (41%), Gaps = 53/219 (24%)
Query: 61 LKKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKTVSMMG 120
L+ Y H L N A + D ++ Q F L TG +D T+++M
Sbjct: 43 LRSYYHPLNPAGILKKNAAGSMVD----------RLREMQSFFGLEVTGKLDDNTLAIMK 92
Query: 121 KPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPKWPATKQI--------------ISCA 166
+PRCGVPDV Y +P KW T + A
Sbjct: 93 QPRCGVPDV---------------GEYNVFPRTLKWSQTNLTYRIVNYTPDLTHSEVEKA 137
Query: 167 FLPGTR--TDVQEPDYD-----AADVKISFQRGDHGDGYPFDGPGPYNLLAHSFPP---T 216
F + +DV ++ AD+ ISF +HGD YPFDGP LLAH+FPP
Sbjct: 138 FKKAFKVWSDVTPLNFTRIHNGTADIMISFGTKEHGDFYPFDGPS--GLLAHAFPPGPNY 195
Query: 217 DGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
G H+D DE WT + ++ VA HE H LGL H
Sbjct: 196 GGDAHFDDDETWTSSS--KGYNLFLVAAHEFGHSLGLDH 232
>sp|P52176|MMP9_BOVIN Matrix metalloproteinase-9 OS=Bos taurus GN=MMP9 PE=2 SV=1
Length = 712
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 91/189 (48%), Gaps = 40/189 (21%)
Query: 62 KKYLHTLGYLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKTVSMMGK 121
++YL+ GY A + DG ++L+ A+ +QR +L TG +D T++ M
Sbjct: 46 EEYLYRYGYTPG-----AELSEDG----QSLQRALLRFQRRLSLPETGELDSTTLNAMRA 96
Query: 122 PRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPKWPAT------KQIISCAF-------- 167
PRCGVPDV G + G +H H + Y W + +I AF
Sbjct: 97 PRCGVPDV--GRFQTFEGELKWHHHNITY-----WIQNYSEDLPRAVIDDAFARAFALWS 149
Query: 168 --LPGTRTDVQEPDYDAADVKISFQRGDHGDGYPFDGPGPYNLLAHSFPP---TDGRFHY 222
P T T V P+ AD+ I F +HGDGYPFDG LLAH+FPP G H+
Sbjct: 150 AVTPLTFTRVYGPE---ADIVIQFGVREHGDGYPFDGKN--GLLAHAFPPGKGIQGDAHF 204
Query: 223 DGDENWTVG 231
D +E W++G
Sbjct: 205 DDEELWSLG 213
>sp|Q9ULZ9|MMP17_HUMAN Matrix metalloproteinase-17 OS=Homo sapiens GN=MMP17 PE=1 SV=4
Length = 603
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 21/185 (11%)
Query: 90 ENLESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPD--VINGTTRMQGGPA--HYHT 145
E L A+ Q+ L TG +D T+++M PRC +PD V+ R + PA ++
Sbjct: 76 EELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDLPVLTQARRRRQAPAPTKWNK 135
Query: 146 HYVFYPGR--PK-WPATKQIISCAFLPGTR--TDVQEPDY-----DAADVKISFQRGDHG 195
+ + R P+ P + + +D+ ++ AAD++I F + DH
Sbjct: 136 RNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQIDFSKADHN 195
Query: 196 DGYPFDGPGPYNLLAHSFPP----TDGRFHYDGDENWTVGAVPG-AVDMQTVALHELRHV 250
DGYPFDGPG +AH+F P T G H+D DE WT + +D+ VA+HE H
Sbjct: 196 DGYPFDGPG--GTVAHAFFPGHHHTAGDTHFDDDEAWTFRSSDAHGMDLFAVAVHEFGHA 253
Query: 251 LGLAH 255
+GL+H
Sbjct: 254 IGLSH 258
>sp|O77656|MMP13_BOVIN Collagenase 3 OS=Bos taurus GN=MMP13 PE=2 SV=1
Length = 471
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 81/184 (44%), Gaps = 43/184 (23%)
Query: 96 VKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYPGRPK 155
++ Q F L TG +D T+ +M KPRCGVPDV Y +P K
Sbjct: 68 LREMQSFFGLEVTGRLDDNTLDIMKKPRCGVPDV---------------GEYNVFPRTLK 112
Query: 156 WPA--------------TKQIISCAFLPGTR--TDVQEPDYD-----AADVKISFQRGDH 194
W T + AF + +DV ++ AD+ ISF +H
Sbjct: 113 WSKMNLTYRIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFTRIHNGTADIMISFGTKEH 172
Query: 195 GDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGDENWTVGAVPGAVDMQTVALHELRHVL 251
GD YPFDGP LLAH+FPP G H+D DE WT + ++ VA HE H L
Sbjct: 173 GDFYPFDGPS--GLLAHAFPPGPNYGGDAHFDDDETWTSSS--KGYNLFLVAAHEFGHSL 228
Query: 252 GLAH 255
GL H
Sbjct: 229 GLDH 232
>sp|P45452|MMP13_HUMAN Collagenase 3 OS=Homo sapiens GN=MMP13 PE=1 SV=1
Length = 471
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 90/210 (42%), Gaps = 43/210 (20%)
Query: 70 YLSNHNHNHAAAAADGDYFDENLESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDV 129
YL ++ H A + ++ ++ Q F L TG +D T+ +M KPRCGVPDV
Sbjct: 42 YLRSYYHPTNLAGILKENAASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGVPDV 101
Query: 130 INGTTRMQGGPAHYHTHYVFYPGRPKWPA--------------TKQIISCAFLPGTR--T 173
Y +P KW T + AF + +
Sbjct: 102 ---------------GEYNVFPRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWS 146
Query: 174 DVQEPDYD-----AADVKISFQRGDHGDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGD 225
DV ++ AD+ ISF +HGD YPFDGP LLAH+FPP G H+D D
Sbjct: 147 DVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPS--GLLAHAFPPGPNYGGDAHFDDD 204
Query: 226 ENWTVGAVPGAVDMQTVALHELRHVLGLAH 255
E WT + ++ VA HE H LGL H
Sbjct: 205 ETWTSSS--KGYNLFLVAAHEFGHSLGLDH 232
>sp|P33434|MMP2_MOUSE 72 kDa type IV collagenase OS=Mus musculus GN=Mmp2 PE=2 SV=1
Length = 662
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 76/164 (46%), Gaps = 41/164 (25%)
Query: 92 LESAVKTYQRNFNLNPTGHMDLKTVSMMGKPRCGVPDVINGTTRMQGGPAHYHTHYVFYP 151
L+ +K Q+ F L TG +D T+ M KPRCG PDV N Y F+P
Sbjct: 70 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVAN---------------YNFFP 114
Query: 152 GRPKWPATK--------------QIISCAFLPGTR--TDVQEPDYD-----AADVKISFQ 190
+PKW + + + AF + +DV + AD+ I+F
Sbjct: 115 RKPKWDKNQITYRIIGYTPDLDPETVDDAFARALKVWSDVTPLRFSRIHDGEADIMINFG 174
Query: 191 RGDHGDGYPFDGPGPYNLLAHSFPP---TDGRFHYDGDENWTVG 231
R +HGDGYPFDG LLAH+F P G H+D DE WT+G
Sbjct: 175 RWEHGDGYPFDGKD--GLLAHAFAPGTGVGGDSHFDDDELWTLG 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,625,650
Number of Sequences: 539616
Number of extensions: 5308246
Number of successful extensions: 9808
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 9398
Number of HSP's gapped (non-prelim): 164
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)