BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043093
(75 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54TE7|GPN2_DICDI GPN-loop GTPase 2 homolog OS=Dictyostelium discoideum GN=gpn2 PE=2
SV=1
Length = 315
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDASAVEFSKIAVR 60
KL K + VIED+SLV+F L+I DK+SVA L+ IDKSNGYI+ +D + +I R
Sbjct: 213 KLNKAIAGVIEDFSLVSFIPLNIMDKKSVANLIASIDKSNGYIYGSLDTNTA-ILEIQER 271
Query: 61 DVDWDYFRY 69
+ W++ +Y
Sbjct: 272 ETQWNFDKY 280
>sp|Q4R579|GPN2_MACFA GPN-loop GTPase 2 OS=Macaca fascicularis GN=GPN2 PE=2 SV=1
Length = 310
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDASAVEFSKIAVR 60
+L ++L +IEDYSLV+F L+IQDKES+ ++++ +DK+NGY F + ++E A
Sbjct: 220 QLNEKLVQLIEDYSLVSFIPLNIQDKESIQRVLQAVDKANGYCFGAQEQRSLEAMMSAAM 279
Query: 61 DVDWDY 66
D+ +
Sbjct: 280 GADFHF 285
>sp|Q9H9Y4|GPN2_HUMAN GPN-loop GTPase 2 OS=Homo sapiens GN=GPN2 PE=2 SV=2
Length = 310
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDASAVEFSKIAVR 60
+L ++L +IEDYSLV+F L+IQDKES+ ++++ +DK+NGY F + ++E A
Sbjct: 220 QLNEKLVQLIEDYSLVSFIPLNIQDKESIQRVLQAVDKANGYCFRAQEQRSLEAMMSAAM 279
Query: 61 DVDWDY 66
D+ +
Sbjct: 280 GADFHF 285
>sp|A6H7F2|GPN2_BOVIN GPN-loop GTPase 2 OS=Bos taurus GN=GPN2 PE=2 SV=1
Length = 310
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDASAVEFSKIAVR 60
+L ++L +IEDYSLV+F L+IQDKES+ ++++ +DK+NGY F + ++E A
Sbjct: 220 QLNEKLVQLIEDYSLVSFIPLNIQDKESIQQVLQAVDKANGYCFGVQEQRSLEAMMSAAM 279
Query: 61 DVDWDY 66
D+ +
Sbjct: 280 GADFHF 285
>sp|Q58DD9|GPN2_PIG GPN-loop GTPase 2 OS=Sus scrofa GN=GPN2 PE=2 SV=1
Length = 310
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDASAVEFSKIAVR 60
+L ++L +IEDYSLV+F L+IQDKES+ ++++ +DK+NGY F + ++E A
Sbjct: 220 QLNEKLVQLIEDYSLVSFIPLNIQDKESIQRVLQAVDKANGYCFGVQEQRSLEAMMSAAV 279
Query: 61 DVDWDY 66
D+ +
Sbjct: 280 GADFHF 285
>sp|Q8VEJ1|GPN2_MOUSE GPN-loop GTPase 2 OS=Mus musculus GN=Gpn2 PE=2 SV=2
Length = 310
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 44/66 (66%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDASAVEFSKIAVR 60
+L ++L ++EDYSLV+F L+IQDK+S+ ++++ +DK+NGY F + ++E A
Sbjct: 220 QLNEKLVQLVEDYSLVSFIPLNIQDKDSIQRVLQAVDKANGYCFGVQEQRSLEAMMSAAM 279
Query: 61 DVDWDY 66
D+ +
Sbjct: 280 GADFHF 285
>sp|D4A7C0|GPN2_RAT GPN-loop GTPase 2 OS=Rattus norvegicus GN=Gpn2 PE=3 SV=1
Length = 310
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 40/53 (75%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDASAVE 53
+L ++L +IEDYSLV+F L+IQDK+S+ ++++ +DK+NGY F + ++E
Sbjct: 220 QLNEKLVQLIEDYSLVSFIPLNIQDKDSIQRVLQAVDKANGYCFGVQEQRSLE 272
>sp|Q6PUR6|GPN2_DANRE GPN-loop GTPase 2 OS=Danio rerio GN=gpn2 PE=2 SV=1
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 2 LTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDASAVEFSKIAVRD 61
L +L +VI+DYSLV+F L++QDKES+ ++++ +DK+NGY F ++ ++ A
Sbjct: 222 LNVKLAEVIQDYSLVSFVPLNVQDKESMMQVLRTVDKANGYCFGDLEERNLQAMMSAAVG 281
Query: 62 VDWDY 66
D+ +
Sbjct: 282 ADFQF 286
>sp|Q5BJ53|GPN2_XENTR GPN-loop GTPase 2 OS=Xenopus tropicalis GN=gpn2 PE=2 SV=1
Length = 303
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDASAVEFSKIAVR 60
+L ++L +VI+DY LV F L I+D++S+ ++ +DK++G+ F S +AV
Sbjct: 229 RLHEKLAEVIQDYGLVTFMPLSIKDEKSLRLVLSAVDKASGFCFGETKQSLGNLMSVAV- 287
Query: 61 DVDWDYFRYPS 71
D+ + YPS
Sbjct: 288 GADFQFTSYPS 298
>sp|Q08726|GPN2_YEAST GPN-loop GTPase 2 homolog OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YOR262W PE=1 SV=1
Length = 347
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDASA 51
KLT+ + +++ D++LV+F L + DKES+ L +IDK+NGYIF +
Sbjct: 220 KLTETIKELVSDFNLVSFEVLSVDDKESMINLQGVIDKANGYIFGASEVGG 270
>sp|Q66KF6|GPN2_XENLA GPN-loop GTPase 2 OS=Xenopus laevis GN=gpn2 PE=2 SV=1
Length = 318
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDASAVEFSKIAV 59
+L ++L VIEDY LV F L I+D +S+ ++ +DK++G+ F S +AV
Sbjct: 229 RLHEKLAGVIEDYGLVTFMPLSIKDDKSLQLVLSAVDKASGFCFGEAKQSLGNLMSVAV 287
>sp|Q9UTL7|GPN2_SCHPO GPN-loop GTPase 2 homolog OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPAC144.07c PE=3 SV=1
Length = 315
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 37/59 (62%)
Query: 2 LTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDASAVEFSKIAVR 60
L K +C+++ED++LV+F + +++K S+ ++++ ID++ GY + + AVR
Sbjct: 215 LNKAICELVEDFNLVSFEVVAVENKASMLRVLRKIDQAGGYAYGSTEIGGDAVWVNAVR 273
>sp|Q54NK8|GPN3_DICDI GPN-loop GTPase 3 homolog OS=Dictyostelium discoideum GN=gpn3 PE=3
SV=1
Length = 285
Score = 37.0 bits (84), Expect = 0.035, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGY 42
++ K + ++ED+SLV F LDI D+ES+ L++ ID S Y
Sbjct: 211 RMNKAIGSLLEDFSLVGFVPLDITDQESLNVLLQHIDNSIQY 252
>sp|Q6ZM63|GPN3_DANRE GPN-loop GTPase 3 OS=Danio rerio GN=gpn3 PE=2 SV=2
Length = 285
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGY 42
KLTK +C +I+DYS+V F D D+E + +++ ID S Y
Sbjct: 213 KLTKAICGLIDDYSMVRFLPFDRTDEEGINIVLQHIDFSIQY 254
>sp|Q4WT40|GPN3_ASPFU GPN-loop GTPase 3 homolog AFUA_1G10640 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=AFUA_1G10640 PE=3 SV=1
Length = 293
Score = 35.8 bits (81), Expect = 0.078, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 29/39 (74%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKS 39
+L + + +I+D+S+V+F LD+QD++SVA ++ ID +
Sbjct: 230 RLNRAVGQLIDDFSMVSFLKLDVQDEDSVAAVLSHIDDA 268
>sp|Q9UHW5|GPN3_HUMAN GPN-loop GTPase 3 OS=Homo sapiens GN=GPN3 PE=1 SV=2
Length = 284
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLID 37
KLTK +C +I+DYS+V F D D+ES+ +++ ID
Sbjct: 213 KLTKAICGLIDDYSMVRFLPYDQSDEESMNIVLQHID 249
>sp|Q6R518|GPN3_RAT GPN-loop GTPase 3 OS=Rattus norvegicus GN=Gpn3 PE=2 SV=1
Length = 284
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLID 37
KLTK +C +++DYS+V F D D+ES+ +++ ID
Sbjct: 213 KLTKPVCGLVDDYSMVRFLPYDQSDEESMNIVLQHID 249
>sp|Q9D3W4|GPN3_MOUSE GPN-loop GTPase 3 OS=Mus musculus GN=Gpn3 PE=2 SV=1
Length = 284
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLID 37
KLTK +C +++DYS+V F D D+ES+ +++ ID
Sbjct: 213 KLTKAVCGLVDDYSMVRFLPYDQSDEESMNIVLQHID 249
>sp|Q28I42|GPN3_XENTR GPN-loop GTPase 3 OS=Xenopus tropicalis GN=gpn3 PE=2 SV=1
Length = 285
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLID 37
KLT+ LC +I+DYS+V F D D+E + +++ ID
Sbjct: 213 KLTEALCGLIDDYSMVRFLPFDRSDEECMNIVLQHID 249
>sp|Q0P5E2|GPN3_BOVIN GPN-loop GTPase 3 OS=Bos taurus GN=GPN3 PE=2 SV=1
Length = 284
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLID 37
KLT +C +I+DYS+V F D D+ES+ +++ ID
Sbjct: 213 KLTNAICGLIDDYSMVRFLPYDQSDEESMNIVLQHID 249
>sp|Q4V7Z0|GPN3_XENLA GPN-loop GTPase 3 OS=Xenopus laevis GN=gpn3 PE=2 SV=1
Length = 285
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLID 37
KLT+ LC +++DYS+V F D D+E + +++ ID
Sbjct: 213 KLTEALCGLVDDYSMVRFLPFDRSDEECMNIVLQHID 249
>sp|Q4PF70|GPN3_USTMA GPN-loop GTPase 3 homolog UM01243 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=UM01243 PE=3 SV=1
Length = 281
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 2 LTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGY 42
L + L +I+D+S+V+F LD D++SV ++ ID + Y
Sbjct: 221 LNQALVQLIDDFSMVSFMPLDSTDEDSVGTILSHIDNAVQY 261
>sp|Q4IQT8|GPN3_GIBZE GPN-loop GTPase 3 homolog FG00420 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FGSG_00420
PE=3 SV=1
Length = 301
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLID 37
+L + + +IE +S++N+ LD+ +++SVA ++ ID
Sbjct: 240 RLNRAVAGLIESFSMINYHKLDVTNEDSVAAILSYID 276
>sp|O14443|GPN3_SCHPO GPN-loop GTPase 3 homolog fet5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fet5 PE=2 SV=1
Length = 276
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 29/42 (69%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGY 42
+L + + +I+D+++VNF L+ ++ESV++++ ID + +
Sbjct: 214 ELNRCIVQLIDDFNMVNFLPLESGNEESVSRVLSYIDDATQW 255
>sp|Q6CQA6|GPN3_KLULA GPN-loop GTPase 3 homolog KLLA0D18557g OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=KLLA0D18557g PE=3 SV=2
Length = 271
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 25/37 (67%)
Query: 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLID 37
KL + + ++++D+ +V F L+ ++ ESV+ ++ ID
Sbjct: 212 KLNEAIANLVDDFGMVQFLPLEAKNPESVSTILSYID 248
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,204,004
Number of Sequences: 539616
Number of extensions: 770468
Number of successful extensions: 2443
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2416
Number of HSP's gapped (non-prelim): 28
length of query: 75
length of database: 191,569,459
effective HSP length: 46
effective length of query: 29
effective length of database: 166,747,123
effective search space: 4835666567
effective search space used: 4835666567
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)