Query 043093
Match_columns 75
No_of_seqs 126 out of 340
Neff 4.8
Searched_HMMs 46136
Date Fri Mar 29 12:47:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043093.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043093hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1533 Predicted GTPase [Gene 99.8 1.1E-19 2.5E-24 135.7 5.5 68 1-68 213-280 (290)
2 KOG1534 Putative transcription 99.5 2.7E-14 5.9E-19 106.0 3.7 48 1-48 211-258 (273)
3 PF03029 ATP_bind_1: Conserved 98.8 2.8E-09 6.1E-14 76.9 1.4 42 1-42 196-238 (238)
4 PRK13768 GTPase; Provisional 93.6 0.09 2E-06 38.0 3.4 45 1-45 206-251 (253)
5 PF13561 adh_short_C2: Enoyl-( 83.8 2.3 5.1E-05 29.1 4.2 40 3-43 34-74 (241)
6 COG0623 FabI Enoyl-[acyl-carri 81.0 3.3 7.2E-05 31.4 4.4 41 1-41 43-83 (259)
7 PRK07984 enoyl-(acyl carrier p 73.9 8.2 0.00018 27.4 4.6 37 5-41 47-83 (262)
8 PF00106 adh_short: short chai 72.1 8.2 0.00018 24.4 3.9 33 10-42 48-80 (167)
9 PRK07370 enoyl-(acyl carrier p 71.2 11 0.00023 26.4 4.6 36 6-41 51-86 (258)
10 PRK06997 enoyl-(acyl carrier p 70.2 11 0.00024 26.4 4.5 38 4-41 46-83 (260)
11 PRK07533 enoyl-(acyl carrier p 69.6 12 0.00025 26.1 4.5 35 6-40 52-86 (258)
12 PRK06603 enoyl-(acyl carrier p 69.5 12 0.00026 26.2 4.6 36 4-39 48-83 (260)
13 PRK09730 putative NAD(P)-bindi 68.5 11 0.00025 25.2 4.2 25 15-39 52-76 (247)
14 PRK08690 enoyl-(acyl carrier p 68.1 13 0.00028 26.0 4.5 36 4-39 46-81 (261)
15 PRK08415 enoyl-(acyl carrier p 66.3 16 0.00034 26.1 4.7 37 4-40 45-81 (274)
16 PRK06505 enoyl-(acyl carrier p 65.1 17 0.00036 25.8 4.6 36 5-40 48-83 (271)
17 PRK08159 enoyl-(acyl carrier p 64.3 18 0.00039 25.6 4.7 37 4-40 50-86 (272)
18 PRK08416 7-alpha-hydroxysteroi 64.1 9.2 0.0002 26.5 3.1 27 15-41 60-86 (260)
19 PRK08594 enoyl-(acyl carrier p 62.0 20 0.00044 25.0 4.6 36 5-40 48-85 (257)
20 PRK12939 short chain dehydroge 61.0 21 0.00045 24.0 4.3 27 14-40 56-82 (250)
21 PF14213 DUF4325: Domain of un 59.1 11 0.00023 22.4 2.4 32 2-33 35-72 (74)
22 PRK06128 oxidoreductase; Provi 58.1 25 0.00054 25.1 4.5 36 5-40 96-132 (300)
23 PRK07062 short chain dehydroge 57.2 27 0.00058 24.0 4.4 35 6-40 49-85 (265)
24 PRK07825 short chain dehydroge 56.5 29 0.00062 24.0 4.5 27 14-40 50-76 (273)
25 PRK07677 short chain dehydroge 55.8 30 0.00064 23.6 4.5 26 14-39 50-75 (252)
26 PRK08251 short chain dehydroge 55.7 16 0.00035 24.7 3.1 26 15-40 54-79 (248)
27 PRK08340 glucose-1-dehydrogena 55.1 33 0.00072 23.6 4.6 28 11-38 45-72 (259)
28 COG4221 Short-chain alcohol de 54.1 29 0.00063 26.1 4.4 38 4-41 41-80 (246)
29 PRK05650 short chain dehydroge 53.8 33 0.00073 23.7 4.5 29 13-41 48-76 (270)
30 KOG1611 Predicted short chain- 53.8 16 0.00035 27.7 3.0 30 13-42 53-82 (249)
31 PRK05599 hypothetical protein; 53.6 33 0.00071 23.7 4.4 25 15-39 50-74 (246)
32 PRK06398 aldose dehydrogenase; 53.5 18 0.0004 25.1 3.1 25 16-40 46-70 (258)
33 PRK06124 gluconate 5-dehydroge 53.3 33 0.00072 23.3 4.4 25 16-40 62-86 (256)
34 PRK06172 short chain dehydroge 52.9 33 0.00072 23.3 4.3 26 14-39 56-81 (253)
35 PRK06179 short chain dehydroge 52.0 22 0.00047 24.5 3.3 24 16-39 47-70 (270)
36 PRK08303 short chain dehydroge 51.6 38 0.00081 24.7 4.6 34 6-39 58-92 (305)
37 PRK12745 3-ketoacyl-(acyl-carr 51.3 21 0.00047 24.1 3.1 27 15-41 53-79 (256)
38 PRK05854 short chain dehydroge 51.0 37 0.00079 24.6 4.5 35 4-38 53-89 (313)
39 PRK09242 tropinone reductase; 50.9 35 0.00075 23.3 4.2 27 14-40 60-86 (257)
40 PRK06463 fabG 3-ketoacyl-(acyl 49.6 25 0.00054 24.1 3.3 23 16-38 53-75 (255)
41 PRK07889 enoyl-(acyl carrier p 49.1 24 0.00052 24.6 3.2 25 16-40 59-83 (256)
42 PRK07097 gluconate 5-dehydroge 49.0 42 0.00091 23.1 4.4 27 15-41 60-86 (265)
43 PRK05786 fabG 3-ketoacyl-(acyl 49.0 48 0.001 22.1 4.6 28 12-39 51-78 (238)
44 PRK06483 dihydromonapterin red 48.6 43 0.00092 22.6 4.3 31 9-40 42-72 (236)
45 PRK07523 gluconate 5-dehydroge 48.4 49 0.0011 22.5 4.6 25 16-40 61-85 (255)
46 PRK07985 oxidoreductase; Provi 48.3 46 0.001 23.8 4.6 34 5-38 90-124 (294)
47 PRK12826 3-ketoacyl-(acyl-carr 48.0 42 0.00091 22.4 4.1 26 12-37 53-78 (251)
48 PRK08589 short chain dehydroge 47.5 45 0.00098 23.3 4.4 24 16-39 56-79 (272)
49 PRK07576 short chain dehydroge 47.0 46 0.001 23.1 4.4 24 15-38 59-82 (264)
50 PRK07478 short chain dehydroge 47.0 47 0.001 22.6 4.3 25 15-39 56-80 (254)
51 PRK07063 short chain dehydroge 46.8 43 0.00092 22.9 4.1 27 15-41 59-85 (260)
52 PRK07831 short chain dehydroge 46.6 49 0.0011 22.7 4.4 27 15-41 70-96 (262)
53 PRK12859 3-ketoacyl-(acyl-carr 46.2 27 0.00058 24.1 3.0 26 16-41 70-95 (256)
54 PRK07814 short chain dehydroge 46.0 48 0.001 22.9 4.3 26 15-40 60-85 (263)
55 cd06387 PBP1_iGluR_AMPA_GluR3 45.8 42 0.0009 25.6 4.3 41 2-43 111-151 (372)
56 PRK07890 short chain dehydroge 45.0 30 0.00064 23.5 3.1 25 16-40 56-80 (258)
57 PRK07109 short chain dehydroge 44.4 51 0.0011 24.2 4.4 27 15-41 58-84 (334)
58 cd02040 NifH NifH gene encodes 43.8 16 0.00034 25.5 1.6 24 7-30 243-266 (270)
59 PRK07775 short chain dehydroge 43.7 51 0.0011 23.0 4.2 26 15-40 60-85 (274)
60 PRK06924 short chain dehydroge 43.6 32 0.0007 23.2 3.1 26 15-40 49-74 (251)
61 PRK08862 short chain dehydroge 43.5 60 0.0013 22.4 4.5 27 15-41 55-81 (227)
62 PRK09186 flagellin modificatio 43.1 67 0.0014 21.7 4.6 23 15-37 56-78 (256)
63 PRK08085 gluconate 5-dehydroge 42.9 54 0.0012 22.3 4.1 24 15-38 59-82 (254)
64 PRK12824 acetoacetyl-CoA reduc 42.4 35 0.00076 22.8 3.1 24 15-38 53-76 (245)
65 PRK06079 enoyl-(acyl carrier p 42.3 33 0.00072 23.7 3.0 25 15-39 56-80 (252)
66 PRK12744 short chain dehydroge 42.3 67 0.0015 21.9 4.5 24 16-39 63-86 (257)
67 PRK07024 short chain dehydroge 42.2 55 0.0012 22.4 4.1 23 15-37 51-73 (257)
68 PRK08643 acetoin reductase; Va 41.9 64 0.0014 21.9 4.4 24 15-38 52-75 (256)
69 PRK12936 3-ketoacyl-(acyl-carr 41.8 37 0.0008 22.7 3.1 24 16-39 54-77 (245)
70 PRK13656 trans-2-enoyl-CoA red 41.6 63 0.0014 25.8 4.8 38 4-41 92-130 (398)
71 TIGR01832 kduD 2-deoxy-D-gluco 41.5 36 0.00079 22.9 3.1 25 15-39 53-77 (248)
72 PRK08936 glucose-1-dehydrogena 41.4 61 0.0013 22.2 4.2 26 15-40 58-83 (261)
73 KOG2865 NADH:ubiquinone oxidor 41.2 19 0.00041 28.7 1.8 33 9-41 104-136 (391)
74 PRK12748 3-ketoacyl-(acyl-carr 41.1 36 0.00078 23.3 3.0 24 15-38 68-91 (256)
75 PRK08063 enoyl-(acyl carrier p 40.9 37 0.00081 22.9 3.0 26 16-41 56-81 (250)
76 PRK06947 glucose-1-dehydrogena 40.9 77 0.0017 21.3 4.6 33 7-39 44-77 (248)
77 TIGR01500 sepiapter_red sepiap 40.5 37 0.0008 23.4 3.0 25 15-39 56-80 (256)
78 PRK06114 short chain dehydroge 40.5 82 0.0018 21.5 4.7 24 16-39 60-83 (254)
79 PRK12935 acetoacetyl-CoA reduc 40.4 64 0.0014 21.7 4.2 21 16-36 58-78 (247)
80 TIGR02415 23BDH acetoin reduct 40.0 82 0.0018 21.2 4.7 22 16-37 51-72 (254)
81 PRK05866 short chain dehydroge 40.0 65 0.0014 23.1 4.3 26 15-40 90-115 (293)
82 PRK12746 short chain dehydroge 39.8 58 0.0013 22.0 3.9 23 15-37 57-79 (254)
83 PRK06701 short chain dehydroge 39.7 79 0.0017 22.5 4.7 33 5-37 86-119 (290)
84 PRK08265 short chain dehydroge 39.5 40 0.00088 23.3 3.1 24 15-38 53-76 (261)
85 PRK07791 short chain dehydroge 39.5 69 0.0015 22.7 4.4 25 15-39 65-89 (286)
86 PRK05872 short chain dehydroge 39.3 70 0.0015 22.8 4.4 27 15-41 58-84 (296)
87 PRK08217 fabG 3-ketoacyl-(acyl 39.3 75 0.0016 21.2 4.3 23 16-38 56-78 (253)
88 PRK08628 short chain dehydroge 39.2 42 0.00091 22.8 3.1 24 16-39 57-80 (258)
89 TIGR01831 fabG_rel 3-oxoacyl-( 39.1 60 0.0013 21.7 3.8 22 15-36 49-70 (239)
90 TIGR01829 AcAcCoA_reduct aceto 38.9 44 0.00096 22.2 3.1 25 15-39 51-75 (242)
91 PRK12937 short chain dehydroge 38.8 74 0.0016 21.3 4.2 24 15-38 56-79 (245)
92 PRK09134 short chain dehydroge 38.4 74 0.0016 21.7 4.3 26 14-39 59-84 (258)
93 PRK06949 short chain dehydroge 38.0 82 0.0018 21.3 4.4 26 14-39 58-83 (258)
94 PLN02253 xanthoxin dehydrogena 37.8 81 0.0018 21.8 4.4 25 15-39 67-91 (280)
95 PRK06101 short chain dehydroge 37.2 74 0.0016 21.6 4.1 30 8-37 40-69 (240)
96 PRK06171 sorbitol-6-phosphate 37.2 47 0.001 22.8 3.1 24 16-39 51-74 (266)
97 PRK07069 short chain dehydroge 37.0 51 0.0011 22.1 3.2 26 15-40 52-77 (251)
98 PRK08226 short chain dehydroge 36.9 1E+02 0.0022 20.9 4.8 27 13-39 53-79 (263)
99 PRK06123 short chain dehydroge 36.8 88 0.0019 21.0 4.4 24 16-39 54-77 (248)
100 PRK05855 short chain dehydroge 36.7 83 0.0018 23.9 4.6 24 16-39 366-389 (582)
101 PRK06196 oxidoreductase; Provi 36.6 74 0.0016 22.8 4.2 23 16-38 73-95 (315)
102 KOG2622 Putative myrosinase pr 36.6 37 0.0008 28.0 2.8 39 6-44 184-222 (510)
103 cd06392 PBP1_iGluR_delta_1 N-t 36.5 51 0.0011 25.6 3.5 41 2-43 125-165 (400)
104 PRK09135 pteridine reductase; 36.4 50 0.0011 22.0 3.1 23 15-37 58-80 (249)
105 PRK12825 fabG 3-ketoacyl-(acyl 36.2 50 0.0011 21.8 3.0 24 15-38 57-80 (249)
106 PRK07806 short chain dehydroge 35.4 52 0.0011 22.2 3.1 23 16-38 58-80 (248)
107 PRK05337 beta-hexosaminidase; 34.8 92 0.002 23.8 4.6 40 2-41 13-54 (337)
108 PRK06940 short chain dehydroge 34.5 87 0.0019 22.0 4.2 22 15-36 50-71 (275)
109 KOG1205 Predicted dehydrogenas 33.9 53 0.0012 24.9 3.2 29 16-44 65-93 (282)
110 PRK05867 short chain dehydroge 33.6 92 0.002 21.2 4.1 25 16-40 60-84 (253)
111 PRK05876 short chain dehydroge 33.4 91 0.002 22.0 4.2 22 16-37 57-78 (275)
112 PRK06139 short chain dehydroge 33.3 99 0.0021 22.9 4.5 25 15-39 57-81 (330)
113 TIGR01963 PHB_DH 3-hydroxybuty 33.2 60 0.0013 21.8 3.1 26 16-41 52-77 (255)
114 PRK06138 short chain dehydroge 33.0 60 0.0013 21.8 3.1 22 16-37 55-76 (252)
115 PRK08220 2,3-dihydroxybenzoate 32.8 63 0.0014 21.7 3.2 23 16-38 50-72 (252)
116 PRK08213 gluconate 5-dehydroge 32.6 1E+02 0.0022 21.0 4.2 24 15-38 62-85 (259)
117 PRK10538 malonic semialdehyde 32.5 64 0.0014 22.0 3.2 24 16-39 48-71 (248)
118 PRK08642 fabG 3-ketoacyl-(acyl 32.4 62 0.0013 21.7 3.1 26 16-41 54-79 (253)
119 PRK12384 sorbitol-6-phosphate 32.1 1.2E+02 0.0026 20.6 4.5 27 15-41 54-80 (259)
120 PRK12481 2-deoxy-D-gluconate 3 32.0 65 0.0014 22.2 3.2 31 8-38 48-79 (251)
121 PLN00015 protochlorophyllide r 31.8 85 0.0018 22.5 3.8 24 15-38 48-71 (308)
122 PRK05884 short chain dehydroge 31.6 1E+02 0.0022 20.9 4.1 21 16-36 46-66 (223)
123 PRK07774 short chain dehydroge 31.4 1.1E+02 0.0024 20.5 4.2 27 15-41 56-82 (250)
124 PRK07454 short chain dehydroge 31.4 67 0.0014 21.6 3.1 23 15-37 56-78 (241)
125 PF08659 KR: KR domain; Inter 31.4 70 0.0015 21.4 3.2 35 6-40 45-79 (181)
126 PRK07904 short chain dehydroge 31.0 1.1E+02 0.0023 21.3 4.1 21 15-35 61-81 (253)
127 PRK12743 oxidoreductase; Provi 30.9 1.2E+02 0.0026 20.7 4.3 24 15-38 53-76 (256)
128 PRK12829 short chain dehydroge 30.7 69 0.0015 21.7 3.1 23 16-38 60-82 (264)
129 PRK06198 short chain dehydroge 30.7 1.2E+02 0.0025 20.6 4.2 25 15-39 57-81 (260)
130 PRK05993 short chain dehydroge 30.7 70 0.0015 22.4 3.2 23 16-38 49-71 (277)
131 cd06390 PBP1_iGluR_AMPA_GluR1 30.6 99 0.0021 23.3 4.2 40 2-42 104-143 (364)
132 PRK06182 short chain dehydroge 30.0 80 0.0017 21.8 3.4 22 16-37 48-69 (273)
133 PRK07102 short chain dehydroge 30.0 58 0.0013 22.0 2.6 25 14-38 51-75 (243)
134 PRK06200 2,3-dihydroxy-2,3-dih 30.0 1.4E+02 0.0031 20.4 4.6 25 16-40 54-78 (263)
135 PRK12827 short chain dehydroge 29.9 1.3E+02 0.0028 20.0 4.3 25 15-39 60-84 (249)
136 PRK06720 hypothetical protein; 29.7 1.4E+02 0.003 20.1 4.5 28 15-42 66-93 (169)
137 TIGR01830 3oxo_ACP_reduc 3-oxo 29.6 1.5E+02 0.0033 19.5 4.6 24 15-38 49-72 (239)
138 PRK06077 fabG 3-ketoacyl-(acyl 29.5 77 0.0017 21.3 3.1 27 15-41 57-83 (252)
139 PRK06180 short chain dehydroge 29.5 1.4E+02 0.0031 20.8 4.6 26 15-40 51-76 (277)
140 PRK06935 2-deoxy-D-gluconate 3 29.3 75 0.0016 21.7 3.1 33 6-38 54-87 (258)
141 PRK12823 benD 1,6-dihydroxycyc 29.3 1.6E+02 0.0036 19.9 4.8 23 15-37 57-79 (260)
142 PRK05875 short chain dehydroge 28.6 77 0.0017 21.8 3.1 23 15-37 59-81 (276)
143 PRK06113 7-alpha-hydroxysteroi 28.6 79 0.0017 21.6 3.1 24 15-38 61-84 (255)
144 TIGR03206 benzo_BadH 2-hydroxy 28.5 1.4E+02 0.0031 19.9 4.3 23 15-37 53-75 (250)
145 PRK08309 short chain dehydroge 28.5 1.5E+02 0.0032 20.3 4.5 25 14-38 47-71 (177)
146 PRK06523 short chain dehydroge 28.4 80 0.0017 21.5 3.1 23 16-38 51-73 (260)
147 KOG2226 Proteins containing re 28.3 74 0.0016 27.7 3.4 46 4-49 488-533 (786)
148 PRK06194 hypothetical protein; 28.3 1.4E+02 0.003 20.7 4.3 23 16-38 57-79 (287)
149 PRK08993 2-deoxy-D-gluconate 3 28.1 78 0.0017 21.7 3.0 23 16-38 59-81 (253)
150 PRK08277 D-mannonate oxidoredu 28.0 1.3E+02 0.0028 20.8 4.1 24 15-38 60-83 (278)
151 KOG1610 Corticosteroid 11-beta 27.8 68 0.0015 25.1 2.9 24 19-42 81-104 (322)
152 PRK07231 fabG 3-ketoacyl-(acyl 27.3 83 0.0018 21.0 3.0 22 15-36 54-75 (251)
153 COG4273 Uncharacterized conser 27.1 41 0.00089 23.3 1.4 34 9-43 97-130 (135)
154 PF04548 AIG1: AIG1 family; I 26.9 1.3E+02 0.0028 20.8 4.0 40 3-43 143-188 (212)
155 PF00113 Enolase_C: Enolase, C 26.6 1.8E+02 0.0038 22.1 4.9 43 4-46 140-183 (295)
156 PRK08339 short chain dehydroge 26.6 79 0.0017 22.0 2.9 22 16-37 60-81 (263)
157 PRK07792 fabG 3-ketoacyl-(acyl 26.6 1.3E+02 0.0029 21.5 4.1 24 15-38 63-86 (306)
158 PRK06482 short chain dehydroge 26.4 89 0.0019 21.6 3.1 22 15-36 49-70 (276)
159 PRK06197 short chain dehydroge 26.0 86 0.0019 22.2 3.0 23 15-37 68-90 (306)
160 PRK07067 sorbitol dehydrogenas 25.9 94 0.002 21.1 3.1 22 16-37 54-75 (257)
161 PRK08261 fabG 3-ketoacyl-(acyl 25.7 1.8E+02 0.004 22.0 4.9 33 6-39 249-281 (450)
162 KOG1201 Hydroxysteroid 17-beta 25.5 1.7E+02 0.0038 22.6 4.7 39 5-43 77-115 (300)
163 PRK08177 short chain dehydroge 25.4 80 0.0017 21.2 2.6 23 15-37 46-68 (225)
164 PRK08263 short chain dehydroge 25.4 97 0.0021 21.5 3.1 26 15-40 50-75 (275)
165 KOG1209 1-Acyl dihydroxyaceton 25.4 91 0.002 24.0 3.1 33 5-38 44-76 (289)
166 PRK05565 fabG 3-ketoacyl-(acyl 25.0 98 0.0021 20.5 3.0 23 16-38 57-79 (247)
167 PRK07832 short chain dehydroge 25.0 1.1E+02 0.0023 21.2 3.3 25 15-39 51-75 (272)
168 PRK07856 short chain dehydroge 24.9 1E+02 0.0022 21.0 3.1 22 16-37 49-70 (252)
169 PRK07074 short chain dehydroge 24.7 1.1E+02 0.0023 20.8 3.2 22 15-36 50-71 (257)
170 cd06394 PBP1_iGluR_Kainate_KA1 24.7 1.9E+02 0.0042 21.7 4.8 38 2-40 121-158 (333)
171 PRK05717 oxidoreductase; Valid 24.6 85 0.0018 21.4 2.7 22 15-36 57-78 (255)
172 PRK06484 short chain dehydroge 24.3 95 0.002 23.8 3.1 24 16-39 53-76 (520)
173 PRK07453 protochlorophyllide o 24.2 1E+02 0.0022 22.1 3.1 23 15-37 56-78 (322)
174 PRK05653 fabG 3-ketoacyl-(acyl 24.0 1.1E+02 0.0023 20.2 3.0 24 16-39 56-79 (246)
175 PRK08350 hypothetical protein; 23.9 91 0.002 24.6 3.0 31 4-36 202-232 (341)
176 PRK07666 fabG 3-ketoacyl-(acyl 23.3 1.9E+02 0.0042 19.3 4.2 23 15-37 57-79 (239)
177 PRK14128 iraD DNA replication/ 23.2 68 0.0015 19.3 1.8 26 21-46 1-26 (69)
178 TIGR03325 BphB_TodD cis-2,3-di 23.0 1.2E+02 0.0025 20.9 3.1 24 15-38 52-75 (262)
179 PRK12429 3-hydroxybutyrate deh 23.0 2.2E+02 0.0048 19.0 4.5 25 15-39 54-78 (258)
180 PRK05557 fabG 3-ketoacyl-(acyl 22.7 1.2E+02 0.0026 20.0 3.1 23 16-38 57-79 (248)
181 TIGR01289 LPOR light-dependent 22.6 1.1E+02 0.0024 22.1 3.1 24 15-38 54-77 (314)
182 PF03435 Saccharop_dh: Sacchar 22.5 84 0.0018 23.4 2.5 35 6-40 36-72 (386)
183 PRK08278 short chain dehydroge 22.5 2.3E+02 0.0051 19.7 4.6 23 15-37 63-85 (273)
184 COG1028 FabG Dehydrogenases wi 22.3 1.3E+02 0.0027 20.3 3.2 27 15-41 58-85 (251)
185 PRK06181 short chain dehydroge 22.3 2.1E+02 0.0046 19.4 4.3 25 14-38 50-74 (263)
186 cd04885 ACT_ThrD-I Tandem C-te 22.2 1.6E+02 0.0035 16.6 3.2 24 19-43 42-65 (68)
187 smart00822 PKS_KR This enzymat 22.2 1.9E+02 0.0042 17.5 4.0 24 15-38 54-77 (180)
188 KOG4169 15-hydroxyprostaglandi 22.2 2E+02 0.0043 22.1 4.4 41 4-44 43-85 (261)
189 PRK08267 short chain dehydroge 22.1 2E+02 0.0043 19.6 4.1 22 15-36 49-70 (260)
190 PRK07035 short chain dehydroge 21.3 2.2E+02 0.0047 19.2 4.2 23 16-38 59-81 (252)
191 PRK13394 3-hydroxybutyrate deh 21.3 2.3E+02 0.0051 19.0 4.3 22 16-37 58-79 (262)
192 PRK06841 short chain dehydroge 21.1 1.4E+02 0.003 20.2 3.1 23 16-38 63-85 (255)
193 PRK09072 short chain dehydroge 20.8 1.1E+02 0.0024 20.9 2.7 22 15-36 54-75 (263)
194 PRK05693 short chain dehydroge 20.5 1.5E+02 0.0033 20.4 3.4 23 16-38 46-68 (274)
195 PRK06500 short chain dehydroge 20.3 1.4E+02 0.0031 19.9 3.1 25 16-40 54-78 (249)
196 cd08584 PI-PLCc_GDPD_SF_unchar 20.2 2.1E+02 0.0045 20.6 4.0 34 2-35 67-100 (192)
No 1
>KOG1533 consensus Predicted GTPase [General function prediction only]
Probab=99.79 E-value=1.1e-19 Score=135.69 Aligned_cols=68 Identities=38% Similarity=0.687 Sum_probs=65.2
Q ss_pred ChhHHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhcCcccCCcchhHHHHHHHHhhcCcceeee
Q 043093 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDASAVEFSKIAVRDVDWDYFR 68 (75)
Q Consensus 1 kLn~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~gY~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (75)
|||++||++|+||+||||.||||+|+|||.+|++.||+|+||.|+..|.+....+..++++.+|++.|
T Consensus 213 kLne~ic~~IeD~~LVSF~~L~v~nkeSml~l~~~IDkAnGy~f~~~e~~~~~~~~~~a~~~~~~~~~ 280 (290)
T KOG1533|consen 213 KLNEAICELIEDFNLVSFEVLDVDNKESMLRLQQTIDKANGYIFGATEQGVGDALWINAVREGLDRYR 280 (290)
T ss_pred HHHHHHHHHHhccCceeeEEeeccCHHHHHHHHHHHHhccCeEeccchhhhHHHHHHHhhhcccchhh
Confidence 69999999999999999999999999999999999999999999999999888899999999988875
No 2
>KOG1534 consensus Putative transcription factor FET5 [Transcription]
Probab=99.47 E-value=2.7e-14 Score=106.03 Aligned_cols=48 Identities=38% Similarity=0.515 Sum_probs=45.9
Q ss_pred ChhHHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhcCcccCCcc
Q 043093 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMD 48 (75)
Q Consensus 1 kLn~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~gY~~~~~~ 48 (75)
|||++||.+|+|||||+|+|||.+|||||..+|++||.|+||+++.+-
T Consensus 211 ~L~~~i~~~v~d~~Mv~FlPl~~~~eeSi~~iL~~ID~aiQy~Ed~E~ 258 (273)
T KOG1534|consen 211 KLTKCIAQLVDDYSMVNFLPLDSSDEESINIILSYIDDAIQYGEDLEP 258 (273)
T ss_pred HHHHHHHHHhccccceeeeecCCCCHHHHHHHHHHHHHHHHhccccCc
Confidence 689999999999999999999999999999999999999999998853
No 3
>PF03029 ATP_bind_1: Conserved hypothetical ATP binding protein; InterPro: IPR004130 Members of this family are found in a range of archaea and eukaryotes and have hypothesised ATP binding activity.; GO: 0000166 nucleotide binding; PDB: 1YR7_A 1YRA_B 1YR8_A 1YR6_A 1YR9_A 1YRB_A 2OXR_A.
Probab=98.75 E-value=2.8e-09 Score=76.93 Aligned_cols=42 Identities=38% Similarity=0.725 Sum_probs=36.9
Q ss_pred ChhHHHHHHhhhCCCc-ceeeeecCCHHHHHHHHHHHHhhcCc
Q 043093 1 KLTKELCDVIEDYSLV-NFSTLDIQDKESVAKLVKLIDKSNGY 42 (75)
Q Consensus 1 kLn~ai~~lIeDysLV-~F~pLdi~deesi~~ll~~ID~a~gY 42 (75)
+|+++|+++|++|+++ +|+|+++++++++.+|+++||+|+||
T Consensus 196 ~l~~~i~~~l~~~~~~~~f~pls~~~~~~~~~L~~~id~a~~y 238 (238)
T PF03029_consen 196 KLNEEIAELLDDFGLVIRFIPLSSKDGEGMEELLAAIDKANQY 238 (238)
T ss_dssp HHHHHHHHHCCCCSSS---EE-BTTTTTTHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhcCCCceEEEEECCChHHHHHHHHHHHHHhcC
Confidence 4789999999999999 99999999999999999999999998
No 4
>PRK13768 GTPase; Provisional
Probab=93.55 E-value=0.09 Score=37.98 Aligned_cols=45 Identities=18% Similarity=0.085 Sum_probs=40.2
Q ss_pred ChhHHHHHHhhhCCCc-ceeeeecCCHHHHHHHHHHHHhhcCcccC
Q 043093 1 KLTKELCDVIEDYSLV-NFSTLDIQDKESVAKLVKLIDKSNGYIFA 45 (75)
Q Consensus 1 kLn~ai~~lIeDysLV-~F~pLdi~deesi~~ll~~ID~a~gY~~~ 45 (75)
+||++|++++++++.. .++|++..+++.+..|+..|.+.+-.+++
T Consensus 206 ~~~~~~~~~i~~~~~~~~vi~iSa~~~~gl~~L~~~I~~~l~~~~~ 251 (253)
T PRK13768 206 LLSLELLRALEETGLPVRVIPVSAKTGEGFDELYAAIQEVFCGGED 251 (253)
T ss_pred HHHHHHHHHHHHHCCCCcEEEEECCCCcCHHHHHHHHHHHcCCCCC
Confidence 4789999999999864 89999999999999999999999876655
No 5
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=83.76 E-value=2.3 Score=29.12 Aligned_cols=40 Identities=25% Similarity=0.359 Sum_probs=33.4
Q ss_pred hHHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhc-Ccc
Q 043093 3 TKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSN-GYI 43 (75)
Q Consensus 3 n~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~-gY~ 43 (75)
..++.++.++++ ...+++|++|++++..+...+-+.. |-.
T Consensus 34 ~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~i 74 (241)
T PF13561_consen 34 ADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRI 74 (241)
T ss_dssp HHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSE
T ss_pred HHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCe
Confidence 456888999988 6689999999999999999887776 444
No 6
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=80.96 E-value=3.3 Score=31.41 Aligned_cols=41 Identities=24% Similarity=0.326 Sum_probs=34.6
Q ss_pred ChhHHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 1 KLTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 1 kLn~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
||-+.+.+|.++.+---.+|+|++++++|..+...|-+-.|
T Consensus 43 ~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g 83 (259)
T COG0623 43 RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWG 83 (259)
T ss_pred HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhC
Confidence 46678889999998766789999999999999998876444
No 7
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=73.87 E-value=8.2 Score=27.36 Aligned_cols=37 Identities=8% Similarity=0.059 Sum_probs=27.2
Q ss_pred HHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 5 ELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 5 ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
.+.++....+-+.++++|++|++++..++..+.+..|
T Consensus 47 ~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 47 RVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred HHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 3444444445567899999999999999998866433
No 8
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=72.11 E-value=8.2 Score=24.45 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=26.5
Q ss_pred hhhCCCcceeeeecCCHHHHHHHHHHHHhhcCc
Q 043093 10 IEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGY 42 (75)
Q Consensus 10 IeDysLV~F~pLdi~deesi~~ll~~ID~a~gY 42 (75)
=....-+.+.++|+++++++..++..+.+..|.
T Consensus 48 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 48 KAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp HHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred ccccccccccccccccccccccccccccccccc
Confidence 334566789999999999999999999954443
No 9
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=71.20 E-value=11 Score=26.41 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=25.7
Q ss_pred HHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 6 LCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 6 i~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
+.++-+.-+-+.++++|++|++++..++..+.+..|
T Consensus 51 ~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 86 (258)
T PRK07370 51 VRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWG 86 (258)
T ss_pred HHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcC
Confidence 334444333366889999999999999988865433
No 10
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=70.16 E-value=11 Score=26.39 Aligned_cols=38 Identities=8% Similarity=0.163 Sum_probs=27.9
Q ss_pred HHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 4 KELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 4 ~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
+.+.++.++.+-..++++|++|++++..++..+....|
T Consensus 46 ~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 46 DRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred HHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 34455656555445789999999999999988865443
No 11
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=69.64 E-value=12 Score=26.11 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=26.6
Q ss_pred HHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 6 LCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 6 i~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.++.++.+-+.++++|++|++++.++...+-+..
T Consensus 52 ~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 52 VEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW 86 (258)
T ss_pred HHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc
Confidence 44555555546689999999999999998886543
No 12
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=69.50 E-value=12 Score=26.16 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=26.4
Q ss_pred HHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhh
Q 043093 4 KELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 4 ~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.+.++.+.++-..++++|++|++++..++..+-+.
T Consensus 48 ~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (260)
T PRK06603 48 KRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK 83 (260)
T ss_pred HHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence 345566666554446799999999999999887553
No 13
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=68.47 E-value=11 Score=25.19 Aligned_cols=25 Identities=24% Similarity=0.302 Sum_probs=22.0
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
-+.+++.|++|++++..++..+++.
T Consensus 52 ~~~~~~~D~~d~~~i~~~~~~~~~~ 76 (247)
T PRK09730 52 KAFVLQADISDENQVVAMFTAIDQH 76 (247)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHh
Confidence 3678999999999999999999853
No 14
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=68.10 E-value=13 Score=25.98 Aligned_cols=36 Identities=6% Similarity=0.127 Sum_probs=27.0
Q ss_pred HHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhh
Q 043093 4 KELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 4 ~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.+.++..+.+-..++++|++|++++..++..+-+.
T Consensus 46 ~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (261)
T PRK08690 46 ERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH 81 (261)
T ss_pred HHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence 345556556554557899999999999999887654
No 15
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=66.33 E-value=16 Score=26.08 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=27.0
Q ss_pred HHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 4 KELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 4 ~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.+.++.++.+--.++++|++|++++..+...+.+..
T Consensus 45 ~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 45 KRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDL 81 (274)
T ss_pred HHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHc
Confidence 3455565655422578999999999999999886543
No 16
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=65.12 E-value=17 Score=25.78 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=26.3
Q ss_pred HHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 5 ELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 5 ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
.+.++.+..+-..++++|++|++++..++..+-+..
T Consensus 48 ~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 48 RVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred HHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 344555554534578999999999999999886543
No 17
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=64.26 E-value=18 Score=25.63 Aligned_cols=37 Identities=14% Similarity=0.219 Sum_probs=27.3
Q ss_pred HHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 4 KELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 4 ~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.+.++.+..+-+.++++|++|++++..++..+-+..
T Consensus 50 ~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 50 KRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred HHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 3445555555545678999999999999999876543
No 18
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=64.13 E-value=9.2 Score=26.47 Aligned_cols=27 Identities=26% Similarity=0.283 Sum_probs=22.6
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
-+.++++|++|++++.+++..+.+..|
T Consensus 60 ~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 60 KAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 467999999999999999998865433
No 19
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=62.01 E-value=20 Score=24.99 Aligned_cols=36 Identities=11% Similarity=0.183 Sum_probs=26.3
Q ss_pred HHHHHhhhC--CCcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 5 ELCDVIEDY--SLVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 5 ai~~lIeDy--sLV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
++.++.++. +=+.++++|++|++++..++..+-...
T Consensus 48 ~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 48 EVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred HHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 444555544 235688999999999999998876543
No 20
>PRK12939 short chain dehydrogenase; Provisional
Probab=61.01 E-value=21 Score=23.99 Aligned_cols=27 Identities=15% Similarity=0.154 Sum_probs=22.6
Q ss_pred CCcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 14 SLVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 14 sLV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
.=+.+++.|++|++++..++..+.+..
T Consensus 56 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 56 GRAHAIAADLADPASVQRFFDAAAAAL 82 (250)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 347889999999999999998876653
No 21
>PF14213 DUF4325: Domain of unknown function (DUF4325)
Probab=59.09 E-value=11 Score=22.44 Aligned_cols=32 Identities=13% Similarity=0.402 Sum_probs=22.6
Q ss_pred hhHHHHHHhhhCC------CcceeeeecCCHHHHHHHH
Q 043093 2 LTKELCDVIEDYS------LVNFSTLDIQDKESVAKLV 33 (75)
Q Consensus 2 Ln~ai~~lIeDys------LV~F~pLdi~deesi~~ll 33 (75)
||+++..|+.+|+ .+.|.-++-+.+..|.+++
T Consensus 35 l~eafg~l~~~~~~~~~~~~l~~~~~~~~~~~~I~~vi 72 (74)
T PF14213_consen 35 LNEAFGQLVREFGEEEIKKRLKFKNANESIKEMIKRVI 72 (74)
T ss_pred HHHHHHHHHHHcCHHHHhheeEEecCCHHHHHHHHHHH
Confidence 6899999999999 5555555555556665554
No 22
>PRK06128 oxidoreductase; Provisional
Probab=58.14 E-value=25 Score=25.06 Aligned_cols=36 Identities=19% Similarity=0.134 Sum_probs=26.3
Q ss_pred HHHHHhhhCCC-cceeeeecCCHHHHHHHHHHHHhhc
Q 043093 5 ELCDVIEDYSL-VNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 5 ai~~lIeDysL-V~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
.+++.++..+- +.++++|++|++++..++..+.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 96 EVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 34555655542 5688999999999999998875543
No 23
>PRK07062 short chain dehydrogenase; Provisional
Probab=57.19 E-value=27 Score=23.98 Aligned_cols=35 Identities=14% Similarity=0.199 Sum_probs=24.7
Q ss_pred HHHHhhhCC--CcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 6 LCDVIEDYS--LVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 6 i~~lIeDys--LV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
..++.+.++ =+.++++|++|++++..++..+-+..
T Consensus 49 ~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 49 EARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred HHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 334444443 35678999999999999988875543
No 24
>PRK07825 short chain dehydrogenase; Provisional
Probab=56.53 E-value=29 Score=24.01 Aligned_cols=27 Identities=26% Similarity=0.336 Sum_probs=23.2
Q ss_pred CCcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 14 SLVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 14 sLV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+-+.++++|++|++++..++..+++..
T Consensus 50 ~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 50 GLVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred ccceEEEccCCCHHHHHHHHHHHHHHc
Confidence 347789999999999999999998764
No 25
>PRK07677 short chain dehydrogenase; Provisional
Probab=55.79 E-value=30 Score=23.65 Aligned_cols=26 Identities=31% Similarity=0.463 Sum_probs=21.5
Q ss_pred CCcceeeeecCCHHHHHHHHHHHHhh
Q 043093 14 SLVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 14 sLV~F~pLdi~deesi~~ll~~ID~a 39 (75)
+=+.++++|++|++++..++..+.+.
T Consensus 50 ~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07677 50 GQVLTVQMDVRNPEDVQKMVEQIDEK 75 (252)
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 34668999999999999999887543
No 26
>PRK08251 short chain dehydrogenase; Provisional
Probab=55.65 E-value=16 Score=24.72 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=22.2
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
-+.++++|++|++++..++..+.+..
T Consensus 54 ~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 54 KVAVAALDVNDHDQVFEVFAEFRDEL 79 (248)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999887653
No 27
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=55.10 E-value=33 Score=23.56 Aligned_cols=28 Identities=29% Similarity=0.369 Sum_probs=22.1
Q ss_pred hhCCCcceeeeecCCHHHHHHHHHHHHh
Q 043093 11 EDYSLVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 11 eDysLV~F~pLdi~deesi~~ll~~ID~ 38 (75)
...+=+.++++|++|++++..++..+-+
T Consensus 45 ~~~~~~~~~~~Dv~d~~~~~~~~~~~~~ 72 (259)
T PRK08340 45 KEYGEVYAVKADLSDKDDLKNLVKEAWE 72 (259)
T ss_pred HhcCCceEEEcCCCCHHHHHHHHHHHHH
Confidence 3345577899999999999999887643
No 28
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=54.06 E-value=29 Score=26.08 Aligned_cols=38 Identities=16% Similarity=0.288 Sum_probs=30.0
Q ss_pred HHHHHHhhhCC--CcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 4 KELCDVIEDYS--LVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 4 ~ai~~lIeDys--LV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
++|.+|-+.++ -+-.+++|++|.+++...+..+-...|
T Consensus 41 drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 41 ERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred HHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence 34556666666 688899999999999999998776665
No 29
>PRK05650 short chain dehydrogenase; Provisional
Probab=53.78 E-value=33 Score=23.70 Aligned_cols=29 Identities=14% Similarity=0.165 Sum_probs=23.3
Q ss_pred CCCcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 13 YSLVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 13 ysLV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
-+=+.++++|++|++++..++..++...+
T Consensus 48 ~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 48 GGDGFYQRCDVRDYSQLTALAQACEEKWG 76 (270)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 33467889999999999999998876543
No 30
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=53.78 E-value=16 Score=27.66 Aligned_cols=30 Identities=30% Similarity=0.371 Sum_probs=27.5
Q ss_pred CCCcceeeeecCCHHHHHHHHHHHHhhcCc
Q 043093 13 YSLVNFSTLDIQDKESVAKLVKLIDKSNGY 42 (75)
Q Consensus 13 ysLV~F~pLdi~deesi~~ll~~ID~a~gY 42 (75)
-+=|+.+|||+++.+|+.++.+.+-+..|-
T Consensus 53 d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 53 DSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 567899999999999999999999999775
No 31
>PRK05599 hypothetical protein; Provisional
Probab=53.55 E-value=33 Score=23.67 Aligned_cols=25 Identities=28% Similarity=0.327 Sum_probs=20.9
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
-+.++++|+.|++++..++..+-+.
T Consensus 50 ~~~~~~~Dv~d~~~v~~~~~~~~~~ 74 (246)
T PRK05599 50 SVHVLSFDAQDLDTHRELVKQTQEL 74 (246)
T ss_pred ceEEEEcccCCHHHHHHHHHHHHHh
Confidence 3678999999999999998877544
No 32
>PRK06398 aldose dehydrogenase; Validated
Probab=53.45 E-value=18 Score=25.05 Aligned_cols=25 Identities=24% Similarity=0.402 Sum_probs=21.2
Q ss_pred cceeeeecCCHHHHHHHHHHHHhhc
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.++++|++|++++..++..+.+..
T Consensus 46 ~~~~~~D~~~~~~i~~~~~~~~~~~ 70 (258)
T PRK06398 46 VDYFKVDVSNKEQVIKGIDYVISKY 70 (258)
T ss_pred eEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5689999999999999998876543
No 33
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=53.34 E-value=33 Score=23.32 Aligned_cols=25 Identities=32% Similarity=0.397 Sum_probs=22.0
Q ss_pred cceeeeecCCHHHHHHHHHHHHhhc
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.++++|++|++++..++..++...
T Consensus 62 ~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 62 AEALAFDIADEEAVAAAFARIDAEH 86 (256)
T ss_pred eEEEEccCCCHHHHHHHHHHHHHhc
Confidence 6789999999999999999887754
No 34
>PRK06172 short chain dehydrogenase; Provisional
Probab=52.89 E-value=33 Score=23.27 Aligned_cols=26 Identities=19% Similarity=0.180 Sum_probs=22.0
Q ss_pred CCcceeeeecCCHHHHHHHHHHHHhh
Q 043093 14 SLVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 14 sLV~F~pLdi~deesi~~ll~~ID~a 39 (75)
+-+.+++.|++|++++..++..+.+.
T Consensus 56 ~~~~~~~~D~~~~~~i~~~~~~~~~~ 81 (253)
T PRK06172 56 GEALFVACDVTRDAEVKALVEQTIAA 81 (253)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35788999999999999999888544
No 35
>PRK06179 short chain dehydrogenase; Provisional
Probab=52.02 E-value=22 Score=24.53 Aligned_cols=24 Identities=29% Similarity=0.344 Sum_probs=20.9
Q ss_pred cceeeeecCCHHHHHHHHHHHHhh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.++++|++|++++..++..+.+.
T Consensus 47 ~~~~~~D~~d~~~~~~~~~~~~~~ 70 (270)
T PRK06179 47 VELLELDVTDDASVQAAVDEVIAR 70 (270)
T ss_pred CeeEEeecCCHHHHHHHHHHHHHh
Confidence 578999999999999999987554
No 36
>PRK08303 short chain dehydrogenase; Provisional
Probab=51.61 E-value=38 Score=24.69 Aligned_cols=34 Identities=21% Similarity=0.163 Sum_probs=25.7
Q ss_pred HHHHhhhCC-CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 6 LCDVIEDYS-LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 6 i~~lIeDys-LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
+++.++..+ -+.++++|++|++++..++..+.+.
T Consensus 58 ~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 92 (305)
T PRK08303 58 TAELVTAAGGRGIAVQVDHLVPEQVRALVERIDRE 92 (305)
T ss_pred HHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 445555554 3668999999999999999887554
No 37
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=51.26 E-value=21 Score=24.13 Aligned_cols=27 Identities=19% Similarity=0.220 Sum_probs=22.8
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
-+.+++.|++|++++..++..+.+..|
T Consensus 53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 53 EVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 478999999999999999998865433
No 38
>PRK05854 short chain dehydrogenase; Provisional
Probab=51.02 E-value=37 Score=24.61 Aligned_cols=35 Identities=17% Similarity=0.233 Sum_probs=25.0
Q ss_pred HHHHHHhhhCC--CcceeeeecCCHHHHHHHHHHHHh
Q 043093 4 KELCDVIEDYS--LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 4 ~ai~~lIeDys--LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
+++.++.+..+ =+.|+++|+.|.+++..+...+-+
T Consensus 53 ~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 53 AAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred HHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 34444444332 478999999999999999887643
No 39
>PRK09242 tropinone reductase; Provisional
Probab=50.86 E-value=35 Score=23.31 Aligned_cols=27 Identities=15% Similarity=0.186 Sum_probs=22.5
Q ss_pred CCcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 14 SLVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 14 sLV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+-+.+++.|++|++++..++..+.+..
T Consensus 60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 60 REVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 457788999999999999998876543
No 40
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=49.58 E-value=25 Score=24.07 Aligned_cols=23 Identities=22% Similarity=0.348 Sum_probs=20.0
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.++++|++|++++..++..+-.
T Consensus 53 ~~~~~~Dl~~~~~~~~~~~~~~~ 75 (255)
T PRK06463 53 VFTIKCDVGNRDQVKKSKEVVEK 75 (255)
T ss_pred CeEEEecCCCHHHHHHHHHHHHH
Confidence 67899999999999999987643
No 41
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=49.09 E-value=24 Score=24.57 Aligned_cols=25 Identities=20% Similarity=0.321 Sum_probs=21.0
Q ss_pred cceeeeecCCHHHHHHHHHHHHhhc
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.++++|++|++++..+...+-+..
T Consensus 59 ~~~~~~Dv~~~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 59 APVLELDVTNEEHLASLADRVREHV 83 (256)
T ss_pred CcEEeCCCCCHHHHHHHHHHHHHHc
Confidence 5689999999999999988875543
No 42
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=49.01 E-value=42 Score=23.14 Aligned_cols=27 Identities=26% Similarity=0.356 Sum_probs=22.2
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
=+.++++|++|++++..++..+-...|
T Consensus 60 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 60 EAHGYVCDVTDEDGVQAMVSQIEKEVG 86 (265)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 377899999999999999988765433
No 43
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=49.00 E-value=48 Score=22.12 Aligned_cols=28 Identities=18% Similarity=0.353 Sum_probs=22.8
Q ss_pred hCCCcceeeeecCCHHHHHHHHHHHHhh
Q 043093 12 DYSLVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 12 DysLV~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.+=+.+++.|+.|++++.+++..++..
T Consensus 51 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (238)
T PRK05786 51 KYGNIHYVVGDVSSTESARNVIEKAAKV 78 (238)
T ss_pred hcCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 3344688999999999999999888653
No 44
>PRK06483 dihydromonapterin reductase; Provisional
Probab=48.64 E-value=43 Score=22.55 Aligned_cols=31 Identities=3% Similarity=0.142 Sum_probs=23.9
Q ss_pred HhhhCCCcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 9 VIEDYSLVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 9 lIeDysLV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
-+...+ +.+++.|++|++++..++..+.+..
T Consensus 42 ~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~ 72 (236)
T PRK06483 42 GLRQAG-AQCIQADFSTNAGIMAFIDELKQHT 72 (236)
T ss_pred HHHHcC-CEEEEcCCCCHHHHHHHHHHHHhhC
Confidence 334445 6789999999999999998876543
No 45
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=48.42 E-value=49 Score=22.54 Aligned_cols=25 Identities=12% Similarity=0.278 Sum_probs=21.0
Q ss_pred cceeeeecCCHHHHHHHHHHHHhhc
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.+++.|++|++++..++..+.+..
T Consensus 61 ~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 61 AHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHhc
Confidence 5678899999999999998876543
No 46
>PRK07985 oxidoreductase; Provisional
Probab=48.25 E-value=46 Score=23.80 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=24.9
Q ss_pred HHHHHhhhCC-CcceeeeecCCHHHHHHHHHHHHh
Q 043093 5 ELCDVIEDYS-LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 5 ai~~lIeDys-LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
++.+.++..+ =+.++++|++|++++..++..+-+
T Consensus 90 ~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 124 (294)
T PRK07985 90 DVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK 124 (294)
T ss_pred HHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 3445555443 366899999999999999887644
No 47
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=48.03 E-value=42 Score=22.41 Aligned_cols=26 Identities=12% Similarity=0.075 Sum_probs=21.4
Q ss_pred hCCCcceeeeecCCHHHHHHHHHHHH
Q 043093 12 DYSLVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 12 DysLV~F~pLdi~deesi~~ll~~ID 37 (75)
...-+.++++|+.|++++..++..+-
T Consensus 53 ~~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (251)
T PRK12826 53 AGGKARARQVDVRDRAALKAAVAAGV 78 (251)
T ss_pred cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 33447889999999999999998764
No 48
>PRK08589 short chain dehydrogenase; Validated
Probab=47.46 E-value=45 Score=23.25 Aligned_cols=24 Identities=21% Similarity=0.331 Sum_probs=20.8
Q ss_pred cceeeeecCCHHHHHHHHHHHHhh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.++++|++|++++..++..+.+.
T Consensus 56 ~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 56 AKAYHVDISDEQQVKDFASEIKEQ 79 (272)
T ss_pred EEEEEeecCCHHHHHHHHHHHHHH
Confidence 678999999999999999887643
No 49
>PRK07576 short chain dehydrogenase; Provisional
Probab=47.05 E-value=46 Score=23.11 Aligned_cols=24 Identities=17% Similarity=0.032 Sum_probs=20.3
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
=+.++++|++|++++..++..+..
T Consensus 59 ~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (264)
T PRK07576 59 EGLGVSADVRDYAAVEAAFAQIAD 82 (264)
T ss_pred ceEEEECCCCCHHHHHHHHHHHHH
Confidence 457889999999999999988743
No 50
>PRK07478 short chain dehydrogenase; Provisional
Probab=46.97 E-value=47 Score=22.62 Aligned_cols=25 Identities=20% Similarity=0.106 Sum_probs=20.9
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
=+.+++.|++|++++..++..+-+.
T Consensus 56 ~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 56 EAVALAGDVRDEAYAKALVALAVER 80 (254)
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4678999999999999999876543
No 51
>PRK07063 short chain dehydrogenase; Provisional
Probab=46.75 E-value=43 Score=22.91 Aligned_cols=27 Identities=30% Similarity=0.271 Sum_probs=22.2
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
-+.++++|++|++++..++..+.+..|
T Consensus 59 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 59 RVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 367899999999999999998765543
No 52
>PRK07831 short chain dehydrogenase; Provisional
Probab=46.59 E-value=49 Score=22.69 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=22.1
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
=+.++++|++|++++..++..+.+..|
T Consensus 70 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g 96 (262)
T PRK07831 70 RVEAVVCDVTSEAQVDALIDAAVERLG 96 (262)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 367889999999999999988765433
No 53
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=46.16 E-value=27 Score=24.13 Aligned_cols=26 Identities=19% Similarity=0.368 Sum_probs=21.6
Q ss_pred cceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
+.++++|++|++++..++..+.+..|
T Consensus 70 ~~~~~~D~~~~~~i~~~~~~~~~~~g 95 (256)
T PRK12859 70 VSSMELDLTQNDAPKELLNKVTEQLG 95 (256)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 56789999999999999988866443
No 54
>PRK07814 short chain dehydrogenase; Provisional
Probab=46.01 E-value=48 Score=22.87 Aligned_cols=26 Identities=15% Similarity=0.100 Sum_probs=21.7
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
=+.++++|++|++++..++..+.+..
T Consensus 60 ~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 60 RAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46788999999999999998876543
No 55
>cd06387 PBP1_iGluR_AMPA_GluR3 N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR3 subunit of the AMPA receptor. N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR3 subunit of the AMPA (alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid) receptor. The AMPA receptor is a member of the glutamate-receptor ion channels (iGluRs) which are the major mediators of excitatory synaptic transmission in the central nervous system. AMPA receptors are composed of four types of subunits (GluR1, GluR2, GluR3, and GluR4) which combine to form a tetramer and play an important role in mediating the rapid excitatory synaptic current. Furthermore, this N-terminal domain of the iGluRs has homology with LIVBP, a bacterial periplasmic binding protein, as well as with the structurally related glutamate-binding domain of the G-protein-coupled metabotropic receptors (mGluRs).
Probab=45.85 E-value=42 Score=25.63 Aligned_cols=41 Identities=12% Similarity=0.218 Sum_probs=33.9
Q ss_pred hhHHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhcCcc
Q 043093 2 LTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYI 43 (75)
Q Consensus 2 Ln~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~gY~ 43 (75)
|++||+++|.-|+=-+|.++- ++.+-+.+|...+|..-.+.
T Consensus 111 l~~Ai~diI~~~~Wr~~~~iY-d~d~gl~~Lq~L~~~~~~~~ 151 (372)
T cd06387 111 LKGAILSLLAHYKWEKFVYLY-DTERGFSILQAIMEAAVQNN 151 (372)
T ss_pred HHHHHHHHHHhcCCCEEEEEe-cCchhHHHHHHHHHhhccCC
Confidence 689999999999999999999 76777777777777665543
No 56
>PRK07890 short chain dehydrogenase; Provisional
Probab=45.03 E-value=30 Score=23.46 Aligned_cols=25 Identities=28% Similarity=0.234 Sum_probs=20.9
Q ss_pred cceeeeecCCHHHHHHHHHHHHhhc
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.++++|++|++++..++..+.+..
T Consensus 56 ~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 56 ALAVPTDITDEDQCANLVALALERF 80 (258)
T ss_pred eEEEecCCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999998875443
No 57
>PRK07109 short chain dehydrogenase; Provisional
Probab=44.35 E-value=51 Score=24.24 Aligned_cols=27 Identities=19% Similarity=0.166 Sum_probs=22.1
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
=+.+++.|++|++++..++..+.+..|
T Consensus 58 ~~~~v~~Dv~d~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 58 EALAVVADVADAEAVQAAADRAEEELG 84 (334)
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence 366889999999999999988765544
No 58
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=43.77 E-value=16 Score=25.52 Aligned_cols=24 Identities=21% Similarity=0.329 Sum_probs=20.9
Q ss_pred HHHhhhCCCcceeeeecCCHHHHH
Q 043093 7 CDVIEDYSLVNFSTLDIQDKESVA 30 (75)
Q Consensus 7 ~~lIeDysLV~F~pLdi~deesi~ 30 (75)
.++++..+|+.|.|+++++-|++.
T Consensus 243 ~el~~~~~~~~~~~~~~~~~~~~~ 266 (270)
T cd02040 243 RKIVENKLLVIPTPLEMDELEELL 266 (270)
T ss_pred HHHHhcCCCCCCCCCCHHHHHHHH
Confidence 478889999999999999988864
No 59
>PRK07775 short chain dehydrogenase; Provisional
Probab=43.71 E-value=51 Score=23.01 Aligned_cols=26 Identities=23% Similarity=0.240 Sum_probs=21.7
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
=+.++++|++|++++..++..+.+..
T Consensus 60 ~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 60 EAVAFPLDVTDPDSVKSFVAQAEEAL 85 (274)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 36688999999999999999886644
No 60
>PRK06924 short chain dehydrogenase; Provisional
Probab=43.58 E-value=32 Score=23.24 Aligned_cols=26 Identities=27% Similarity=0.282 Sum_probs=22.1
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
-+.++++|++|++++..++..+++..
T Consensus 49 ~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (251)
T PRK06924 49 NLTFHSLDLQDVHELETNFNEILSSI 74 (251)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 36688999999999999999887654
No 61
>PRK08862 short chain dehydrogenase; Provisional
Probab=43.46 E-value=60 Score=22.40 Aligned_cols=27 Identities=22% Similarity=0.144 Sum_probs=22.1
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
=+.+.++|++|++++..++..+-+..|
T Consensus 55 ~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 55 NVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred CeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 356788999999999999988876555
No 62
>PRK09186 flagellin modification protein A; Provisional
Probab=43.07 E-value=67 Score=21.68 Aligned_cols=23 Identities=26% Similarity=0.420 Sum_probs=19.2
Q ss_pred CcceeeeecCCHHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID 37 (75)
-+.+++.|++|++++..++..+.
T Consensus 56 ~~~~~~~Dl~d~~~~~~~~~~~~ 78 (256)
T PRK09186 56 KLSLVELDITDQESLEEFLSKSA 78 (256)
T ss_pred ceeEEEecCCCHHHHHHHHHHHH
Confidence 35678999999999999988753
No 63
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=42.94 E-value=54 Score=22.29 Aligned_cols=24 Identities=17% Similarity=0.349 Sum_probs=20.0
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
-+.++++|++|++++..++..+-+
T Consensus 59 ~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (254)
T PRK08085 59 KAHAAPFNVTHKQEVEAAIEHIEK 82 (254)
T ss_pred eEEEEecCCCCHHHHHHHHHHHHH
Confidence 466889999999999999887644
No 64
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=42.44 E-value=35 Score=22.77 Aligned_cols=24 Identities=29% Similarity=0.465 Sum_probs=20.6
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
-+.++++|+.|++++..++..+-.
T Consensus 53 ~~~~~~~D~~~~~~v~~~~~~~~~ 76 (245)
T PRK12824 53 QVRLKELDVTDTEECAEALAEIEE 76 (245)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHH
Confidence 478999999999999999887643
No 65
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=42.32 E-value=33 Score=23.72 Aligned_cols=25 Identities=16% Similarity=0.183 Sum_probs=21.0
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
-+.++++|++|++++..++..+-+.
T Consensus 56 ~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 56 EDLLVECDVASDESIERAFATIKER 80 (252)
T ss_pred ceeEEeCCCCCHHHHHHHHHHHHHH
Confidence 3678999999999999998887543
No 66
>PRK12744 short chain dehydrogenase; Provisional
Probab=42.26 E-value=67 Score=21.94 Aligned_cols=24 Identities=17% Similarity=0.105 Sum_probs=20.1
Q ss_pred cceeeeecCCHHHHHHHHHHHHhh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.++++|++|++++.+++..+-+.
T Consensus 63 ~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 63 AVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred EEEEecCcCCHHHHHHHHHHHHHh
Confidence 568899999999999998876443
No 67
>PRK07024 short chain dehydrogenase; Provisional
Probab=42.19 E-value=55 Score=22.44 Aligned_cols=23 Identities=17% Similarity=0.185 Sum_probs=19.9
Q ss_pred CcceeeeecCCHHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID 37 (75)
-+.++++|++|++++..++..+-
T Consensus 51 ~~~~~~~Dl~~~~~i~~~~~~~~ 73 (257)
T PRK07024 51 RVSVYAADVRDADALAAAAADFI 73 (257)
T ss_pred eeEEEEcCCCCHHHHHHHHHHHH
Confidence 47799999999999999888763
No 68
>PRK08643 acetoin reductase; Validated
Probab=41.92 E-value=64 Score=21.91 Aligned_cols=24 Identities=17% Similarity=0.194 Sum_probs=20.4
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
=+.+++.|++|++++..++..+.+
T Consensus 52 ~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (256)
T PRK08643 52 KAIAVKADVSDRDQVFAAVRQVVD 75 (256)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHH
Confidence 356789999999999999988754
No 69
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=41.82 E-value=37 Score=22.66 Aligned_cols=24 Identities=17% Similarity=0.300 Sum_probs=20.4
Q ss_pred cceeeeecCCHHHHHHHHHHHHhh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.+.++|++|++++..++..+-+.
T Consensus 54 ~~~~~~D~~~~~~~~~~~~~~~~~ 77 (245)
T PRK12936 54 VKIFPANLSDRDEVKALGQKAEAD 77 (245)
T ss_pred eEEEEccCCCHHHHHHHHHHHHHH
Confidence 568899999999999998877554
No 70
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=41.60 E-value=63 Score=25.83 Aligned_cols=38 Identities=18% Similarity=0.171 Sum_probs=30.4
Q ss_pred HHHHHHhhhCCC-cceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 4 KELCDVIEDYSL-VNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 4 ~ai~~lIeDysL-V~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
+++.+.++..+. +.++++|+++++++..++..|-+..|
T Consensus 92 ~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I~e~~G 130 (398)
T PRK13656 92 AAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELIKQDLG 130 (398)
T ss_pred HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 356677777774 56789999999999999999876554
No 71
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=41.47 E-value=36 Score=22.95 Aligned_cols=25 Identities=24% Similarity=0.163 Sum_probs=20.9
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
-+.++++|++|++++..++..+.+.
T Consensus 53 ~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 53 RFLSLTADLSDIEAIKALVDSAVEE 77 (248)
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3678999999999999998876543
No 72
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=41.38 E-value=61 Score=22.19 Aligned_cols=26 Identities=15% Similarity=0.027 Sum_probs=21.1
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
-+.++++|++|++++..++..+-...
T Consensus 58 ~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 58 EAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred eEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46689999999999999988764433
No 73
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=41.21 E-value=19 Score=28.66 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=26.9
Q ss_pred HhhhCCCcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 9 VIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 9 lIeDysLV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
+.-|-|-|-|.+.|..||+||..+.++-.-.|.
T Consensus 104 vmGdLGQvl~~~fd~~DedSIr~vvk~sNVVIN 136 (391)
T KOG2865|consen 104 VMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVIN 136 (391)
T ss_pred ecccccceeeeccCCCCHHHHHHHHHhCcEEEE
Confidence 456778889999999999999999987654443
No 74
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=41.08 E-value=36 Score=23.27 Aligned_cols=24 Identities=4% Similarity=0.145 Sum_probs=20.7
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
=+.++++|++|++++..++..+-+
T Consensus 68 ~~~~~~~D~~~~~~~~~~~~~~~~ 91 (256)
T PRK12748 68 RCEHMEIDLSQPYAPNRVFYAVSE 91 (256)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHH
Confidence 377899999999999999988754
No 75
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=40.93 E-value=37 Score=22.85 Aligned_cols=26 Identities=19% Similarity=0.285 Sum_probs=21.8
Q ss_pred cceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
+.+++.|++|++++..++..+.+..|
T Consensus 56 ~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 56 ALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 56788999999999999998865543
No 76
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=40.87 E-value=77 Score=21.33 Aligned_cols=33 Identities=9% Similarity=0.196 Sum_probs=23.8
Q ss_pred HHHhhhCC-CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 7 CDVIEDYS-LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 7 ~~lIeDys-LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
.+.+..++ =+.++++|++|++++..++..+.+.
T Consensus 44 ~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (248)
T PRK06947 44 ADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA 77 (248)
T ss_pred HHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh
Confidence 33344343 3678999999999999999876543
No 77
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=40.48 E-value=37 Score=23.37 Aligned_cols=25 Identities=20% Similarity=0.279 Sum_probs=21.3
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
-+.++++|++|++++..++..+...
T Consensus 56 ~v~~~~~Dl~~~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 56 RVVRVSLDLGAEAGLEQLLKALREL 80 (256)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHhc
Confidence 3678999999999999999887654
No 78
>PRK06114 short chain dehydrogenase; Provisional
Probab=40.47 E-value=82 Score=21.53 Aligned_cols=24 Identities=13% Similarity=0.094 Sum_probs=20.6
Q ss_pred cceeeeecCCHHHHHHHHHHHHhh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.++++|++|++++..++..+.+.
T Consensus 60 ~~~~~~D~~~~~~i~~~~~~~~~~ 83 (254)
T PRK06114 60 AIQIAADVTSKADLRAAVARTEAE 83 (254)
T ss_pred eEEEEcCCCCHHHHHHHHHHHHHH
Confidence 568899999999999999887554
No 79
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=40.40 E-value=64 Score=21.71 Aligned_cols=21 Identities=24% Similarity=0.254 Sum_probs=19.2
Q ss_pred cceeeeecCCHHHHHHHHHHH
Q 043093 16 VNFSTLDIQDKESVAKLVKLI 36 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~I 36 (75)
+.|+++|++|++++..++..+
T Consensus 58 ~~~~~~D~~~~~~~~~~~~~~ 78 (247)
T PRK12935 58 VYAVQADVSKVEDANRLVEEA 78 (247)
T ss_pred EEEEECCCCCHHHHHHHHHHH
Confidence 788999999999999998875
No 80
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=40.02 E-value=82 Score=21.20 Aligned_cols=22 Identities=23% Similarity=0.267 Sum_probs=19.2
Q ss_pred cceeeeecCCHHHHHHHHHHHH
Q 043093 16 VNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID 37 (75)
+.+++.|++|++++..++..+-
T Consensus 51 ~~~~~~Dl~~~~~i~~~~~~~~ 72 (254)
T TIGR02415 51 AVAYKLDVSDKDQVFSAIDQAA 72 (254)
T ss_pred EEEEEcCCCCHHHHHHHHHHHH
Confidence 6788999999999999887763
No 81
>PRK05866 short chain dehydrogenase; Provisional
Probab=40.00 E-value=65 Score=23.08 Aligned_cols=26 Identities=23% Similarity=0.194 Sum_probs=21.2
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
=+.++++|++|++++..++..+-+..
T Consensus 90 ~~~~~~~Dl~d~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 90 DAMAVPCDLSDLDAVDALVADVEKRI 115 (293)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999765443
No 82
>PRK12746 short chain dehydrogenase; Provisional
Probab=39.80 E-value=58 Score=22.04 Aligned_cols=23 Identities=22% Similarity=0.291 Sum_probs=19.6
Q ss_pred CcceeeeecCCHHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID 37 (75)
-+.++++|++|++++..+++.+-
T Consensus 57 ~~~~~~~D~~d~~~i~~~~~~~~ 79 (254)
T PRK12746 57 KAFLIEADLNSIDGVKKLVEQLK 79 (254)
T ss_pred cEEEEEcCcCCHHHHHHHHHHHH
Confidence 46789999999999999988653
No 83
>PRK06701 short chain dehydrogenase; Provisional
Probab=39.69 E-value=79 Score=22.53 Aligned_cols=33 Identities=15% Similarity=0.027 Sum_probs=24.3
Q ss_pred HHHHHhhhCC-CcceeeeecCCHHHHHHHHHHHH
Q 043093 5 ELCDVIEDYS-LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 5 ai~~lIeDys-LV~F~pLdi~deesi~~ll~~ID 37 (75)
.+...++..+ =+.++++|++|++++..++..+-
T Consensus 86 ~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 86 ETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 3444555444 36789999999999999988763
No 84
>PRK08265 short chain dehydrogenase; Provisional
Probab=39.51 E-value=40 Score=23.29 Aligned_cols=24 Identities=21% Similarity=0.332 Sum_probs=20.6
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
-+.+++.|++|++++..++..+-+
T Consensus 53 ~~~~~~~Dl~~~~~~~~~~~~~~~ 76 (261)
T PRK08265 53 RARFIATDITDDAAIERAVATVVA 76 (261)
T ss_pred eeEEEEecCCCHHHHHHHHHHHHH
Confidence 377899999999999999988744
No 85
>PRK07791 short chain dehydrogenase; Provisional
Probab=39.51 E-value=69 Score=22.74 Aligned_cols=25 Identities=24% Similarity=0.141 Sum_probs=20.4
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
=+.++++|++|++++..++..+-+.
T Consensus 65 ~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (286)
T PRK07791 65 EAVANGDDIADWDGAANLVDAAVET 89 (286)
T ss_pred ceEEEeCCCCCHHHHHHHHHHHHHh
Confidence 3568899999999999998876443
No 86
>PRK05872 short chain dehydrogenase; Provisional
Probab=39.34 E-value=70 Score=22.78 Aligned_cols=27 Identities=15% Similarity=0.057 Sum_probs=21.3
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
-+.++++|++|++++..++..+.+..|
T Consensus 58 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 58 RVLTVVADVTDLAAMQAAAEEAVERFG 84 (296)
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 345667999999999999988866544
No 87
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=39.31 E-value=75 Score=21.20 Aligned_cols=23 Identities=22% Similarity=0.234 Sum_probs=20.0
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.+++.|++|++++..++..++.
T Consensus 56 ~~~~~~D~~~~~~~~~~~~~~~~ 78 (253)
T PRK08217 56 VRGYAANVTDEEDVEATFAQIAE 78 (253)
T ss_pred eEEEEcCCCCHHHHHHHHHHHHH
Confidence 56789999999999999998764
No 88
>PRK08628 short chain dehydrogenase; Provisional
Probab=39.16 E-value=42 Score=22.85 Aligned_cols=24 Identities=17% Similarity=0.274 Sum_probs=20.2
Q ss_pred cceeeeecCCHHHHHHHHHHHHhh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.+++.|++|++++..++..+-+.
T Consensus 57 ~~~~~~D~~~~~~~~~~~~~~~~~ 80 (258)
T PRK08628 57 AEFVQVDLTDDAQCRDAVEQTVAK 80 (258)
T ss_pred eEEEEccCCCHHHHHHHHHHHHHh
Confidence 678999999999999999876443
No 89
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=39.11 E-value=60 Score=21.72 Aligned_cols=22 Identities=14% Similarity=0.229 Sum_probs=18.9
Q ss_pred CcceeeeecCCHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLI 36 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~I 36 (75)
=+.++++|++|++++..++..+
T Consensus 49 ~~~~~~~Dl~~~~~~~~~~~~~ 70 (239)
T TIGR01831 49 NARLLQFDVADRVACRTLLEAD 70 (239)
T ss_pred eEEEEEccCCCHHHHHHHHHHH
Confidence 3789999999999999988764
No 90
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=38.92 E-value=44 Score=22.22 Aligned_cols=25 Identities=16% Similarity=0.089 Sum_probs=21.1
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
=+.+.+.|++|++++..++..+.+.
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (242)
T TIGR01829 51 DFRVVEGDVSSFESCKAAVAKVEAE 75 (242)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999887644
No 91
>PRK12937 short chain dehydrogenase; Provisional
Probab=38.78 E-value=74 Score=21.26 Aligned_cols=24 Identities=17% Similarity=0.220 Sum_probs=20.4
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
-+.+++.|++|++++..++..+..
T Consensus 56 ~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (245)
T PRK12937 56 RAIAVQADVADAAAVTRLFDAAET 79 (245)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHH
Confidence 477899999999999999887644
No 92
>PRK09134 short chain dehydrogenase; Provisional
Probab=38.45 E-value=74 Score=21.75 Aligned_cols=26 Identities=19% Similarity=0.142 Sum_probs=20.9
Q ss_pred CCcceeeeecCCHHHHHHHHHHHHhh
Q 043093 14 SLVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 14 sLV~F~pLdi~deesi~~ll~~ID~a 39 (75)
+=+.++++|++|++++..++..+.+.
T Consensus 59 ~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 59 RRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 33678999999999999998876543
No 93
>PRK06949 short chain dehydrogenase; Provisional
Probab=38.01 E-value=82 Score=21.27 Aligned_cols=26 Identities=19% Similarity=0.307 Sum_probs=21.4
Q ss_pred CCcceeeeecCCHHHHHHHHHHHHhh
Q 043093 14 SLVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 14 sLV~F~pLdi~deesi~~ll~~ID~a 39 (75)
+=+.+++.|+++++++..++..+.+.
T Consensus 58 ~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (258)
T PRK06949 58 GAAHVVSLDVTDYQSIKAAVAHAETE 83 (258)
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 34778999999999999999886543
No 94
>PLN02253 xanthoxin dehydrogenase
Probab=37.80 E-value=81 Score=21.82 Aligned_cols=25 Identities=20% Similarity=0.259 Sum_probs=20.4
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
=+.+++.|++|++++..++..+-+.
T Consensus 67 ~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 67 NVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred ceEEEEeecCCHHHHHHHHHHHHHH
Confidence 3678999999999999998865443
No 95
>PRK06101 short chain dehydrogenase; Provisional
Probab=37.22 E-value=74 Score=21.61 Aligned_cols=30 Identities=7% Similarity=0.124 Sum_probs=22.7
Q ss_pred HHhhhCCCcceeeeecCCHHHHHHHHHHHH
Q 043093 8 DVIEDYSLVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 8 ~lIeDysLV~F~pLdi~deesi~~ll~~ID 37 (75)
++.+..+=+.+++.|++|++++..++..+.
T Consensus 40 ~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 69 (240)
T PRK06101 40 ELHTQSANIFTLAFDVTDHPGTKAALSQLP 69 (240)
T ss_pred HHHHhcCCCeEEEeeCCCHHHHHHHHHhcc
Confidence 333333347789999999999999988764
No 96
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=37.17 E-value=47 Score=22.78 Aligned_cols=24 Identities=25% Similarity=0.285 Sum_probs=20.2
Q ss_pred cceeeeecCCHHHHHHHHHHHHhh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.++++|++|++++..++..+.+.
T Consensus 51 ~~~~~~D~~~~~~~~~~~~~~~~~ 74 (266)
T PRK06171 51 YQFVPTDVSSAEEVNHTVAEIIEK 74 (266)
T ss_pred eEEEEccCCCHHHHHHHHHHHHHH
Confidence 557899999999999999887544
No 97
>PRK07069 short chain dehydrogenase; Validated
Probab=37.05 E-value=51 Score=22.12 Aligned_cols=26 Identities=12% Similarity=0.115 Sum_probs=21.1
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
.+.+++.|++|++++..++..+-+..
T Consensus 52 ~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK07069 52 VAFAAVQDVTDEAQWQALLAQAADAM 77 (251)
T ss_pred eEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 45578999999999999998875543
No 98
>PRK08226 short chain dehydrogenase; Provisional
Probab=36.89 E-value=1e+02 Score=20.95 Aligned_cols=27 Identities=22% Similarity=0.181 Sum_probs=22.0
Q ss_pred CCCcceeeeecCCHHHHHHHHHHHHhh
Q 043093 13 YSLVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 13 ysLV~F~pLdi~deesi~~ll~~ID~a 39 (75)
..-+.+++.|++|++++..++..+.+.
T Consensus 53 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 79 (263)
T PRK08226 53 GHRCTAVVADVRDPASVAAAIKRAKEK 79 (263)
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 344678899999999999999887554
No 99
>PRK06123 short chain dehydrogenase; Provisional
Probab=36.79 E-value=88 Score=20.98 Aligned_cols=24 Identities=21% Similarity=0.375 Sum_probs=20.5
Q ss_pred cceeeeecCCHHHHHHHHHHHHhh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.+++.|++|++++..++..+..-
T Consensus 54 ~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (248)
T PRK06123 54 ALAVAADVADEADVLRLFEAVDRE 77 (248)
T ss_pred EEEEEeccCCHHHHHHHHHHHHHH
Confidence 568899999999999999877543
No 100
>PRK05855 short chain dehydrogenase; Validated
Probab=36.72 E-value=83 Score=23.86 Aligned_cols=24 Identities=8% Similarity=0.296 Sum_probs=20.7
Q ss_pred cceeeeecCCHHHHHHHHHHHHhh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.++++|++|++++..++..+.+.
T Consensus 366 ~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 366 AHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHh
Confidence 678899999999999999987554
No 101
>PRK06196 oxidoreductase; Provisional
Probab=36.60 E-value=74 Score=22.81 Aligned_cols=23 Identities=30% Similarity=0.342 Sum_probs=20.3
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.++++|++|.+++..++..+.+
T Consensus 73 v~~~~~Dl~d~~~v~~~~~~~~~ 95 (315)
T PRK06196 73 VEVVMLDLADLESVRAFAERFLD 95 (315)
T ss_pred CeEEEccCCCHHHHHHHHHHHHh
Confidence 78999999999999999987654
No 102
>KOG2622 consensus Putative myrosinase precursor [Defense mechanisms]
Probab=36.59 E-value=37 Score=27.99 Aligned_cols=39 Identities=28% Similarity=0.440 Sum_probs=33.6
Q ss_pred HHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhcCccc
Q 043093 6 LCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIF 44 (75)
Q Consensus 6 i~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~gY~~ 44 (75)
-|++++.+|=|+|.||+-.--=-|..+++.+|.+.|-..
T Consensus 184 ~~dlLd~~GgV~fl~l~~~tyL~VqSlv~~l~e~~~v~~ 222 (510)
T KOG2622|consen 184 SCDLLDERGGVQFLTLARDTYLEVQSLVNVLDECAGVRC 222 (510)
T ss_pred ccchhhhcCCEEEEEcCcchhHHHHHHHHHHHHhhChhh
Confidence 378999999999999998777778889999999988543
No 103
>cd06392 PBP1_iGluR_delta_1 N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the delta1 receptor of an orphan glutamate receptor family. N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the delta1 receptor of an orphan glutamate receptor family. While this N-terminal domain belongs to the periplasmic-binding fold type I superfamily, the glutamate-binding domain of the iGluR is structurally homologous to the periplasmic-binding fold type II. The LIVBP-like domain of iGluRs is thought to play a role in the initial assembly of iGluR subunits, but it is not well understood how this domain is arranged and functions in intact iGluR. Although the delta receptors are a member of the ionotropic glutamate receptor family, they cannot be activated by AMPA, kainate, NMDA, glutamate, or any other ligands. Phylogenetic analysis shows that both GluRdelta1 and GluRalpha2 may be closer related to non-NMDA receptors. In contrast to GluRdelta2, GluRdel
Probab=36.54 E-value=51 Score=25.63 Aligned_cols=41 Identities=10% Similarity=0.222 Sum_probs=34.9
Q ss_pred hhHHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhcCcc
Q 043093 2 LTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYI 43 (75)
Q Consensus 2 Ln~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~gY~ 43 (75)
+++||++||..|+=-+|..+- .|.+.+..|....|.+-...
T Consensus 125 ~~~Ai~dlV~~~~W~~v~~iY-D~d~gl~~lq~L~~~~~~~~ 165 (400)
T cd06392 125 LNDVMLKLVTELRWQKFIVFY-DSEYDIRGLQSFLDQASRLG 165 (400)
T ss_pred HHHHHHHHHHhCCCcEEEEEE-ECcccHHHHHHHHHHHhhcC
Confidence 688999999999999999998 77778888888888766543
No 104
>PRK09135 pteridine reductase; Provisional
Probab=36.36 E-value=50 Score=21.99 Aligned_cols=23 Identities=17% Similarity=0.161 Sum_probs=20.1
Q ss_pred CcceeeeecCCHHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID 37 (75)
-+.+++.|++|++++..++..+.
T Consensus 58 ~~~~~~~Dl~~~~~~~~~~~~~~ 80 (249)
T PRK09135 58 SAAALQADLLDPDALPELVAACV 80 (249)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHH
Confidence 47789999999999999998764
No 105
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=36.16 E-value=50 Score=21.79 Aligned_cols=24 Identities=17% Similarity=0.147 Sum_probs=20.4
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
-+.+++.|++|++++..++..+.+
T Consensus 57 ~~~~~~~D~~~~~~v~~~~~~~~~ 80 (249)
T PRK12825 57 RAQAVQADVTDKAALEAAVAAAVE 80 (249)
T ss_pred ceEEEECCcCCHHHHHHHHHHHHH
Confidence 367899999999999999987744
No 106
>PRK07806 short chain dehydrogenase; Provisional
Probab=35.36 E-value=52 Score=22.17 Aligned_cols=23 Identities=30% Similarity=0.362 Sum_probs=19.5
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.+++.|++|++++..++..+.+
T Consensus 58 ~~~~~~D~~~~~~~~~~~~~~~~ 80 (248)
T PRK07806 58 ASAVGADLTDEESVAALMDTARE 80 (248)
T ss_pred eEEEEcCCCCHHHHHHHHHHHHH
Confidence 67889999999999999887543
No 107
>PRK05337 beta-hexosaminidase; Provisional
Probab=34.79 E-value=92 Score=23.78 Aligned_cols=40 Identities=15% Similarity=0.154 Sum_probs=35.4
Q ss_pred hhHHHHHHhhhCCCcceeee--ecCCHHHHHHHHHHHHhhcC
Q 043093 2 LTKELCDVIEDYSLVNFSTL--DIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 2 Ln~ai~~lIeDysLV~F~pL--di~deesi~~ll~~ID~a~g 41 (75)
|+....++|.++..-.++-+ |+++++.+..++..|-+..+
T Consensus 13 ~~~~~~~~i~~~~~gGvilf~~n~~~~~q~~~l~~~l~~~~~ 54 (337)
T PRK05337 13 LTAEERERLQHPLVGGVILFARNFEDPAQLRELTAAIRAAVR 54 (337)
T ss_pred CCHHHHHHHHccCceEEEEECCCCCCHHHHHHHHHHHHHhcC
Confidence 67788899999999999987 99999999999999987654
No 108
>PRK06940 short chain dehydrogenase; Provisional
Probab=34.48 E-value=87 Score=22.02 Aligned_cols=22 Identities=27% Similarity=0.323 Sum_probs=19.3
Q ss_pred CcceeeeecCCHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLI 36 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~I 36 (75)
=+.++++|++|++++..++..+
T Consensus 50 ~~~~~~~Dv~d~~~i~~~~~~~ 71 (275)
T PRK06940 50 DVSTQEVDVSSRESVKALAATA 71 (275)
T ss_pred eEEEEEeecCCHHHHHHHHHHH
Confidence 3668899999999999999876
No 109
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=33.86 E-value=53 Score=24.87 Aligned_cols=29 Identities=34% Similarity=0.374 Sum_probs=23.8
Q ss_pred cceeeeecCCHHHHHHHHHHHHhhcCccc
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKSNGYIF 44 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a~gY~~ 44 (75)
|-.+|+|++|++++......+.+-.|-.+
T Consensus 65 v~~~~~Dvs~~~~~~~~~~~~~~~fg~vD 93 (282)
T KOG1205|consen 65 VLVLQLDVSDEESVKKFVEWAIRHFGRVD 93 (282)
T ss_pred cEEEeCccCCHHHHHHHHHHHHHhcCCCC
Confidence 56789999999999998888887666554
No 110
>PRK05867 short chain dehydrogenase; Provisional
Probab=33.56 E-value=92 Score=21.20 Aligned_cols=25 Identities=12% Similarity=0.179 Sum_probs=20.7
Q ss_pred cceeeeecCCHHHHHHHHHHHHhhc
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.++++|++|++++..++..+.+..
T Consensus 60 ~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 60 VVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHHh
Confidence 5678999999999999998776543
No 111
>PRK05876 short chain dehydrogenase; Provisional
Probab=33.41 E-value=91 Score=22.00 Aligned_cols=22 Identities=23% Similarity=0.208 Sum_probs=19.4
Q ss_pred cceeeeecCCHHHHHHHHHHHH
Q 043093 16 VNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID 37 (75)
+.++++|++|++++..++..+-
T Consensus 57 ~~~~~~Dv~d~~~v~~~~~~~~ 78 (275)
T PRK05876 57 VHGVMCDVRHREEVTHLADEAF 78 (275)
T ss_pred EEEEeCCCCCHHHHHHHHHHHH
Confidence 6789999999999999988763
No 112
>PRK06139 short chain dehydrogenase; Provisional
Probab=33.34 E-value=99 Score=22.91 Aligned_cols=25 Identities=20% Similarity=0.161 Sum_probs=20.4
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
=+.++++|++|++++..+...+-..
T Consensus 57 ~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 57 EVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred cEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 3568899999999999998876543
No 113
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=33.15 E-value=60 Score=21.76 Aligned_cols=26 Identities=15% Similarity=0.351 Sum_probs=21.6
Q ss_pred cceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
+.++.+|+.|++++..++..+.+..+
T Consensus 52 ~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 52 VIYLVADVTKEDEIADMIAAAAAEFG 77 (255)
T ss_pred eEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 66788999999999999988865543
No 114
>PRK06138 short chain dehydrogenase; Provisional
Probab=33.05 E-value=60 Score=21.79 Aligned_cols=22 Identities=23% Similarity=0.265 Sum_probs=19.5
Q ss_pred cceeeeecCCHHHHHHHHHHHH
Q 043093 16 VNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID 37 (75)
+.+++.|++|++++..++..+-
T Consensus 55 ~~~~~~D~~~~~~~~~~~~~i~ 76 (252)
T PRK06138 55 AFARQGDVGSAEAVEALVDFVA 76 (252)
T ss_pred EEEEEcCCCCHHHHHHHHHHHH
Confidence 6788999999999999988764
No 115
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=32.79 E-value=63 Score=21.74 Aligned_cols=23 Identities=22% Similarity=0.277 Sum_probs=19.7
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.+++.|++|++++..++..+-+
T Consensus 50 ~~~~~~D~~~~~~~~~~~~~~~~ 72 (252)
T PRK08220 50 FATFVLDVSDAAAVAQVCQRLLA 72 (252)
T ss_pred eEEEEecCCCHHHHHHHHHHHHH
Confidence 56889999999999999887643
No 116
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=32.57 E-value=1e+02 Score=21.00 Aligned_cols=24 Identities=13% Similarity=0.185 Sum_probs=20.0
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
=+.+++.|++|++++..++..+-+
T Consensus 62 ~~~~~~~Dl~d~~~i~~~~~~~~~ 85 (259)
T PRK08213 62 DALWIAADVADEADIERLAEETLE 85 (259)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHH
Confidence 366899999999999988887644
No 117
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=32.53 E-value=64 Score=21.98 Aligned_cols=24 Identities=8% Similarity=0.419 Sum_probs=20.1
Q ss_pred cceeeeecCCHHHHHHHHHHHHhh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.+++.|++|++++..++..+-+.
T Consensus 48 ~~~~~~Dl~~~~~i~~~~~~~~~~ 71 (248)
T PRK10538 48 LYIAQLDVRNRAAIEEMLASLPAE 71 (248)
T ss_pred eEEEEecCCCHHHHHHHHHHHHHH
Confidence 678899999999999998876543
No 118
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=32.44 E-value=62 Score=21.75 Aligned_cols=26 Identities=19% Similarity=0.238 Sum_probs=20.9
Q ss_pred cceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
+.++.+|++|++++..++..+.+..|
T Consensus 54 ~~~~~~D~~~~~~~~~~~~~~~~~~g 79 (253)
T PRK08642 54 AIALQADVTDREQVQAMFATATEHFG 79 (253)
T ss_pred eEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 56889999999999999888654433
No 119
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=32.06 E-value=1.2e+02 Score=20.59 Aligned_cols=27 Identities=22% Similarity=0.181 Sum_probs=22.1
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
-+.+++.|++|++++..++..+.+..|
T Consensus 54 ~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 54 MAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred eeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 477899999999999999888765433
No 120
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=32.05 E-value=65 Score=22.18 Aligned_cols=31 Identities=16% Similarity=0.276 Sum_probs=22.7
Q ss_pred HHhhhCC-CcceeeeecCCHHHHHHHHHHHHh
Q 043093 8 DVIEDYS-LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 8 ~lIeDys-LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.++..+ =+.++++|++|++++..++..+-+
T Consensus 48 ~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12481 48 AQVEALGRKFHFITADLIQQKDIDSIVSQAVE 79 (251)
T ss_pred HHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 3444332 356889999999999999987643
No 121
>PLN00015 protochlorophyllide reductase
Probab=31.81 E-value=85 Score=22.54 Aligned_cols=24 Identities=21% Similarity=0.292 Sum_probs=20.4
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
-+.++++|++|++++..+...+-+
T Consensus 48 ~~~~~~~Dl~d~~~v~~~~~~~~~ 71 (308)
T PLN00015 48 SYTVMHLDLASLDSVRQFVDNFRR 71 (308)
T ss_pred eEEEEEecCCCHHHHHHHHHHHHh
Confidence 467889999999999999887743
No 122
>PRK05884 short chain dehydrogenase; Provisional
Probab=31.63 E-value=1e+02 Score=20.95 Aligned_cols=21 Identities=24% Similarity=0.191 Sum_probs=17.8
Q ss_pred cceeeeecCCHHHHHHHHHHH
Q 043093 16 VNFSTLDIQDKESVAKLVKLI 36 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~I 36 (75)
+.++++|++|++++..+...+
T Consensus 46 ~~~~~~D~~~~~~v~~~~~~~ 66 (223)
T PRK05884 46 VDAIVCDNTDPASLEEARGLF 66 (223)
T ss_pred CcEEecCCCCHHHHHHHHHHH
Confidence 568899999999999987753
No 123
>PRK07774 short chain dehydrogenase; Provisional
Probab=31.37 E-value=1.1e+02 Score=20.47 Aligned_cols=27 Identities=15% Similarity=0.177 Sum_probs=21.5
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
=+.++++|++|++++..+...+.+..|
T Consensus 56 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 56 TAIAVQVDVSDPDSAKAMADATVSAFG 82 (250)
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 356889999999999999988754443
No 124
>PRK07454 short chain dehydrogenase; Provisional
Probab=31.35 E-value=67 Score=21.60 Aligned_cols=23 Identities=13% Similarity=0.161 Sum_probs=19.6
Q ss_pred CcceeeeecCCHHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID 37 (75)
=+.++++|++|++++..++..+-
T Consensus 56 ~~~~~~~D~~~~~~~~~~~~~~~ 78 (241)
T PRK07454 56 KAAAYSIDLSNPEAIAPGIAELL 78 (241)
T ss_pred cEEEEEccCCCHHHHHHHHHHHH
Confidence 46788999999999999988754
No 125
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=31.35 E-value=70 Score=21.37 Aligned_cols=35 Identities=17% Similarity=0.244 Sum_probs=24.0
Q ss_pred HHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 6 LCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 6 i~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.++-..=.-|.+.+.|++|++.+..++..+-...
T Consensus 45 i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (181)
T PF08659_consen 45 IRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF 79 (181)
T ss_dssp HHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred HHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc
Confidence 34444444568899999999999999998886443
No 126
>PRK07904 short chain dehydrogenase; Provisional
Probab=31.04 E-value=1.1e+02 Score=21.29 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=17.6
Q ss_pred CcceeeeecCCHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKL 35 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ 35 (75)
=+.++++|++|++++..++..
T Consensus 61 ~v~~~~~D~~~~~~~~~~~~~ 81 (253)
T PRK07904 61 SVEVIDFDALDTDSHPKVIDA 81 (253)
T ss_pred ceEEEEecCCChHHHHHHHHH
Confidence 378999999999998877664
No 127
>PRK12743 oxidoreductase; Provisional
Probab=30.92 E-value=1.2e+02 Score=20.73 Aligned_cols=24 Identities=17% Similarity=0.192 Sum_probs=20.6
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
-+.+++.|++|.+++..++..+-+
T Consensus 53 ~~~~~~~Dl~~~~~~~~~~~~~~~ 76 (256)
T PRK12743 53 RAEIRQLDLSDLPEGAQALDKLIQ 76 (256)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHH
Confidence 577899999999999999987644
No 128
>PRK12829 short chain dehydrogenase; Provisional
Probab=30.71 E-value=69 Score=21.65 Aligned_cols=23 Identities=17% Similarity=0.270 Sum_probs=19.5
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.+++.|++|++++..++..+-+
T Consensus 60 ~~~~~~D~~~~~~~~~~~~~~~~ 82 (264)
T PRK12829 60 VTATVADVADPAQVERVFDTAVE 82 (264)
T ss_pred eEEEEccCCCHHHHHHHHHHHHH
Confidence 47889999999999999887644
No 129
>PRK06198 short chain dehydrogenase; Provisional
Probab=30.70 E-value=1.2e+02 Score=20.58 Aligned_cols=25 Identities=24% Similarity=0.365 Sum_probs=20.7
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
-+.+++.|++|++++..++..+.+.
T Consensus 57 ~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 57 KAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3567899999999999998887654
No 130
>PRK05993 short chain dehydrogenase; Provisional
Probab=30.67 E-value=70 Score=22.37 Aligned_cols=23 Identities=30% Similarity=0.351 Sum_probs=19.8
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.++++|++|++++..++..+..
T Consensus 49 ~~~~~~Dl~d~~~~~~~~~~~~~ 71 (277)
T PRK05993 49 LEAFQLDYAEPESIAALVAQVLE 71 (277)
T ss_pred ceEEEccCCCHHHHHHHHHHHHH
Confidence 57889999999999999987743
No 131
>cd06390 PBP1_iGluR_AMPA_GluR1 N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR1 subunit of the AMPA receptor. N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR1 subunit of the AMPA (alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid) receptor. The AMPA receptor is a member of the glutamate-receptor ion channels (iGluRs) which are the major mediators of excitatory synaptic transmission in the central nervous system. AMPA receptors are composed of four types of subunits (GluR1, GluR2, GluR3, and GluR4) which combine to form a tetramer and play an important role in mediating the rapid excitatory synaptic current. Furthermore, this N-terminal domain of the iGluRs has homology with LIVBP, a bacterial periplasmic binding protein, as well as with the structurally related glutamate-binding domain of the G-protein-coupled metabotropic receptors (mGluRs).
Probab=30.56 E-value=99 Score=23.27 Aligned_cols=40 Identities=28% Similarity=0.381 Sum_probs=31.4
Q ss_pred hhHHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhcCc
Q 043093 2 LTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGY 42 (75)
Q Consensus 2 Ln~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~gY 42 (75)
+.+||+++|..|+--.|..+--+| .....+....+.+-..
T Consensus 104 ~~~Ai~diI~~~~W~~v~iIYd~d-~g~~~lq~l~~~~~~~ 143 (364)
T cd06390 104 LQDALISVIEHYKWQKFVYIYDAD-RGLSVLQKVLDTAAEK 143 (364)
T ss_pred HHHHHHHHHHHcCCcEEEEEEeCC-ccHHHHHHHHHhhhcc
Confidence 578999999999999999998655 7777776666655444
No 132
>PRK06182 short chain dehydrogenase; Validated
Probab=30.04 E-value=80 Score=21.83 Aligned_cols=22 Identities=32% Similarity=0.365 Sum_probs=19.4
Q ss_pred cceeeeecCCHHHHHHHHHHHH
Q 043093 16 VNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID 37 (75)
+.++.+|++|++++..++..+-
T Consensus 48 ~~~~~~Dv~~~~~~~~~~~~~~ 69 (273)
T PRK06182 48 VHPLSLDVTDEASIKAAVDTII 69 (273)
T ss_pred CeEEEeeCCCHHHHHHHHHHHH
Confidence 7789999999999999988663
No 133
>PRK07102 short chain dehydrogenase; Provisional
Probab=30.02 E-value=58 Score=22.00 Aligned_cols=25 Identities=28% Similarity=0.290 Sum_probs=21.0
Q ss_pred CCcceeeeecCCHHHHHHHHHHHHh
Q 043093 14 SLVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 14 sLV~F~pLdi~deesi~~ll~~ID~ 38 (75)
+-+.+++.|++|++.+..++..+.+
T Consensus 51 ~~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (243)
T PRK07102 51 VAVSTHELDILDTASHAAFLDSLPA 75 (243)
T ss_pred CeEEEEecCCCChHHHHHHHHHHhh
Confidence 4578999999999999999887643
No 134
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=30.01 E-value=1.4e+02 Score=20.38 Aligned_cols=25 Identities=12% Similarity=-0.023 Sum_probs=20.7
Q ss_pred cceeeeecCCHHHHHHHHHHHHhhc
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.+++.|++|++++..++..+.+..
T Consensus 54 ~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 54 VLVVEGDVTSYADNQRAVDQTVDAF 78 (263)
T ss_pred ceEEEccCCCHHHHHHHHHHHHHhc
Confidence 5688999999999999988875543
No 135
>PRK12827 short chain dehydrogenase; Provisional
Probab=29.90 E-value=1.3e+02 Score=19.98 Aligned_cols=25 Identities=8% Similarity=-0.064 Sum_probs=21.2
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
-+.+++.|+.|++++..++..+.+.
T Consensus 60 ~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 60 KALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999877554
No 136
>PRK06720 hypothetical protein; Provisional
Probab=29.74 E-value=1.4e+02 Score=20.11 Aligned_cols=28 Identities=7% Similarity=0.156 Sum_probs=22.1
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhcCc
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSNGY 42 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~gY 42 (75)
-+.++++|++|.+++..+...+.+..|.
T Consensus 66 ~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 66 EALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3568899999999999988877665443
No 137
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=29.64 E-value=1.5e+02 Score=19.46 Aligned_cols=24 Identities=25% Similarity=0.292 Sum_probs=20.1
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
-+.+++.|++|++++..++..+..
T Consensus 49 ~~~~~~~D~~~~~~~~~~~~~~~~ 72 (239)
T TIGR01830 49 KALGVVCDVSDREDVKAVVEEIEE 72 (239)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHH
Confidence 366899999999999999987643
No 138
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=29.51 E-value=77 Score=21.25 Aligned_cols=27 Identities=19% Similarity=0.057 Sum_probs=21.8
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhcC
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSNG 41 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~g 41 (75)
-+.++++|++|++++.+++..+.+..+
T Consensus 57 ~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 57 EGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred eeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 356889999999999999988765443
No 139
>PRK06180 short chain dehydrogenase; Provisional
Probab=29.50 E-value=1.4e+02 Score=20.76 Aligned_cols=26 Identities=15% Similarity=0.146 Sum_probs=21.1
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
-+.++++|++|++++..++..+.+..
T Consensus 51 ~~~~~~~D~~d~~~~~~~~~~~~~~~ 76 (277)
T PRK06180 51 RALARLLDVTDFDAIDAVVADAEATF 76 (277)
T ss_pred CeeEEEccCCCHHHHHHHHHHHHHHh
Confidence 36678999999999999988775543
No 140
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=29.32 E-value=75 Score=21.71 Aligned_cols=33 Identities=30% Similarity=0.318 Sum_probs=23.8
Q ss_pred HHHHhhhC-CCcceeeeecCCHHHHHHHHHHHHh
Q 043093 6 LCDVIEDY-SLVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 6 i~~lIeDy-sLV~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.+.+... +=+.++++|++|++++..++..+-.
T Consensus 54 ~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 87 (258)
T PRK06935 54 TRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE 87 (258)
T ss_pred HHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 34444433 2367899999999999999987643
No 141
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=29.26 E-value=1.6e+02 Score=19.90 Aligned_cols=23 Identities=9% Similarity=-0.094 Sum_probs=19.5
Q ss_pred CcceeeeecCCHHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID 37 (75)
=+.+++.|++|++++..++..+-
T Consensus 57 ~~~~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK12823 57 EALALTADLETYAGAQAAMAAAV 79 (260)
T ss_pred eEEEEEEeCCCHHHHHHHHHHHH
Confidence 46688999999999999888763
No 142
>PRK05875 short chain dehydrogenase; Provisional
Probab=28.64 E-value=77 Score=21.84 Aligned_cols=23 Identities=26% Similarity=0.472 Sum_probs=19.6
Q ss_pred CcceeeeecCCHHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID 37 (75)
-+.+++.|++|++++..++..+-
T Consensus 59 ~~~~~~~Dl~~~~~~~~~~~~~~ 81 (276)
T PRK05875 59 AVRYEPADVTDEDQVARAVDAAT 81 (276)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHH
Confidence 46788999999999999988653
No 143
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=28.64 E-value=79 Score=21.57 Aligned_cols=24 Identities=13% Similarity=0.116 Sum_probs=19.7
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
=+.+++.|++|++++..++..+-+
T Consensus 61 ~~~~~~~D~~~~~~i~~~~~~~~~ 84 (255)
T PRK06113 61 QAFACRCDITSEQELSALADFALS 84 (255)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHH
Confidence 356889999999999998887643
No 144
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=28.50 E-value=1.4e+02 Score=19.90 Aligned_cols=23 Identities=26% Similarity=0.270 Sum_probs=19.8
Q ss_pred CcceeeeecCCHHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID 37 (75)
-+.+++.|+.|++++..++..+-
T Consensus 53 ~~~~~~~d~~~~~~~~~~~~~~~ 75 (250)
T TIGR03206 53 NAQAFACDITDRDSVDTAVAAAE 75 (250)
T ss_pred cEEEEEcCCCCHHHHHHHHHHHH
Confidence 47789999999999999988654
No 145
>PRK08309 short chain dehydrogenase; Provisional
Probab=28.46 E-value=1.5e+02 Score=20.27 Aligned_cols=25 Identities=16% Similarity=0.178 Sum_probs=20.7
Q ss_pred CCcceeeeecCCHHHHHHHHHHHHh
Q 043093 14 SLVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 14 sLV~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.+.++++|+.|++++..++..+-+
T Consensus 47 ~~i~~~~~Dv~d~~sv~~~i~~~l~ 71 (177)
T PRK08309 47 ESITPLPLDYHDDDALKLAIKSTIE 71 (177)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4577889999999999999887643
No 146
>PRK06523 short chain dehydrogenase; Provisional
Probab=28.40 E-value=80 Score=21.47 Aligned_cols=23 Identities=22% Similarity=0.385 Sum_probs=19.3
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.+++.|+.|++++..++..+-+
T Consensus 51 ~~~~~~D~~~~~~~~~~~~~~~~ 73 (260)
T PRK06523 51 VEFVAADLTTAEGCAAVARAVLE 73 (260)
T ss_pred eeEEecCCCCHHHHHHHHHHHHH
Confidence 56889999999999998877643
No 147
>KOG2226 consensus Proteins containing regions of low-complexity [General function prediction only]
Probab=28.28 E-value=74 Score=27.69 Aligned_cols=46 Identities=20% Similarity=0.289 Sum_probs=42.4
Q ss_pred HHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhcCcccCCcch
Q 043093 4 KELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYIFAGMDA 49 (75)
Q Consensus 4 ~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~gY~~~~~~~ 49 (75)
..|.+|++-++==.|.-=+-+|..-+..||..+..++||.|+.+..
T Consensus 488 ~kl~eL~ss~S~P~FL~snp~Nh~ll~~LL~afnniiqy~F~~N~n 533 (786)
T KOG2226|consen 488 SKLVELISSFSTPWFLFSNPQNHSLLKYLLEAFNNIIQYQFDGNSN 533 (786)
T ss_pred HHHHHHHHHhcCchhhccCCCcHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 4688999999999999999999999999999999999999999754
No 148
>PRK06194 hypothetical protein; Provisional
Probab=28.26 E-value=1.4e+02 Score=20.66 Aligned_cols=23 Identities=22% Similarity=0.118 Sum_probs=19.5
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.+++.|++|++++..++..+-+
T Consensus 57 ~~~~~~D~~d~~~~~~~~~~~~~ 79 (287)
T PRK06194 57 VLGVRTDVSDAAQVEALADAALE 79 (287)
T ss_pred EEEEECCCCCHHHHHHHHHHHHH
Confidence 66789999999999999987643
No 149
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=28.06 E-value=78 Score=21.69 Aligned_cols=23 Identities=13% Similarity=0.114 Sum_probs=19.5
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.++++|++|++++..++..+.+
T Consensus 59 ~~~~~~Dl~~~~~~~~~~~~~~~ 81 (253)
T PRK08993 59 FLSLTADLRKIDGIPALLERAVA 81 (253)
T ss_pred EEEEECCCCCHHHHHHHHHHHHH
Confidence 56789999999999999987644
No 150
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=28.00 E-value=1.3e+02 Score=20.77 Aligned_cols=24 Identities=25% Similarity=0.155 Sum_probs=20.3
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
=+.+++.|+.|++++..++..+.+
T Consensus 60 ~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (278)
T PRK08277 60 EALAVKADVLDKESLEQARQQILE 83 (278)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHH
Confidence 467889999999999999887644
No 151
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=27.81 E-value=68 Score=25.09 Aligned_cols=24 Identities=29% Similarity=0.374 Sum_probs=20.6
Q ss_pred eeeecCCHHHHHHHHHHHHhhcCc
Q 043093 19 STLDIQDKESVAKLVKLIDKSNGY 42 (75)
Q Consensus 19 ~pLdi~deesi~~ll~~ID~a~gY 42 (75)
+.|||+++|||....+.+-+..+=
T Consensus 81 ~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 81 LQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred EeeccCCHHHHHHHHHHHHHhccc
Confidence 499999999999999988776653
No 152
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=27.34 E-value=83 Score=21.00 Aligned_cols=22 Identities=18% Similarity=0.129 Sum_probs=19.3
Q ss_pred CcceeeeecCCHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLI 36 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~I 36 (75)
-+.++++|+.|++++..++..+
T Consensus 54 ~~~~~~~D~~~~~~~~~~~~~~ 75 (251)
T PRK07231 54 RAIAVAADVSDEADVEAAVAAA 75 (251)
T ss_pred eEEEEECCCCCHHHHHHHHHHH
Confidence 3678999999999999998876
No 153
>COG4273 Uncharacterized conserved protein [Function unknown]
Probab=27.08 E-value=41 Score=23.35 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=27.7
Q ss_pred HhhhCCCcceeeeecCCHHHHHHHHHHHHhhcCcc
Q 043093 9 VIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYI 43 (75)
Q Consensus 9 lIeDysLV~F~pLdi~deesi~~ll~~ID~a~gY~ 43 (75)
+|.|+|+-.=.|.|++|| .++.++..|+.++|-.
T Consensus 97 ~itdlGikK~~~~D~~~e-dv~kv~~~i~e~l~~~ 130 (135)
T COG4273 97 TITDLGIKKTYPSDCKDE-DVEKVARTIKEALTIK 130 (135)
T ss_pred EehhcccccCCCCCCCHH-HHHHHHHHHHHHhhhc
Confidence 367888888899999985 5788999999988753
No 154
>PF04548 AIG1: AIG1 family; InterPro: IPR006703 This entry represents a domain found in Arabidopsis protein AIG1 which appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 (avrRpt2-induced gene) exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2 []. The domain is also apparently found in a number of mammalian proteins, for example the rat immune-associated nucleotide 4 protein. ; GO: 0005525 GTP binding; PDB: 3LXX_A 3BB4_A 3DEF_A 3BB3_A 2J3E_A 3V70_B 3BB1_A 1H65_B 2XTP_A 3P1J_C ....
Probab=26.93 E-value=1.3e+02 Score=20.76 Aligned_cols=40 Identities=18% Similarity=0.296 Sum_probs=31.9
Q ss_pred hHHHHHHhhhCCCcceeeeecC------CHHHHHHHHHHHHhhcCcc
Q 043093 3 TKELCDVIEDYSLVNFSTLDIQ------DKESVAKLVKLIDKSNGYI 43 (75)
Q Consensus 3 n~ai~~lIeDysLV~F~pLdi~------deesi~~ll~~ID~a~gY~ 43 (75)
|+++.+||+..+ -+|+-+|-. +++.+..||..|++.++--
T Consensus 143 ~~~l~~li~~c~-~R~~~f~n~~~~~~~~~~qv~~Ll~~ie~mv~~n 188 (212)
T PF04548_consen 143 NEALQELIEKCG-GRYHVFNNKTKDKEKDESQVSELLEKIEEMVQEN 188 (212)
T ss_dssp HHHHHHHHHHTT-TCEEECCTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhHhHHhhhcC-CEEEEEeccccchhhhHHHHHHHHHHHHHHHHHc
Confidence 457888999888 488888887 6678999999999877653
No 155
>PF00113 Enolase_C: Enolase, C-terminal TIM barrel domain; InterPro: IPR020810 Enolase (2-phospho-D-glycerate hydrolase) is an essential glycolytic enzyme that catalyses the interconversion of 2-phosphoglycerate and phosphoenolpyruvate [, ]. In vertebrates, there are 3 different, tissue-specific isoenzymes, designated alpha, beta and gamma. Alpha is present in most tissues, beta is localised in muscle tissue, and gamma is found only in nervous tissue. The functional enzyme exists as a dimer of any 2 isoforms. In immature organs and in adult liver, it is usually an alpha homodimer, in adult skeletal muscle, a beta homodimer, and in adult neurons, a gamma homodimer. In developing muscle, it is usually an alpha/beta heterodimer, and in the developing nervous system, an alpha/gamma heterodimer []. The tissue specific forms display minor kinetic differences. Tau-crystallin, one of the major lens proteins in some fish, reptiles and birds, has been shown [] to be evolutionary related to enolase. Neuron-specific enolase is released in a variety of neurological diseases, such as multiple sclerosis and after seizures or acute stroke. Several tumour cells have also been found positive for neuron-specific enolase. Beta-enolase deficiency is associated with glycogenosis type XIII defect.; GO: 0000287 magnesium ion binding, 0004634 phosphopyruvate hydratase activity, 0006096 glycolysis, 0000015 phosphopyruvate hydratase complex; PDB: 2FYM_D 3H8A_C 1E9I_D 3TQP_B 2PU1_A 1OEP_A 2PA6_A 1PDY_A 1PDZ_A 3UJ2_E ....
Probab=26.64 E-value=1.8e+02 Score=22.11 Aligned_cols=43 Identities=26% Similarity=0.301 Sum_probs=32.9
Q ss_pred HHHHHHhhhCCCccee-eeecCCHHHHHHHHHHHHhhcCcccCC
Q 043093 4 KELCDVIEDYSLVNFS-TLDIQDKESVAKLVKLIDKSNGYIFAG 46 (75)
Q Consensus 4 ~ai~~lIeDysLV~F~-pLdi~deesi~~ll~~ID~a~gY~~~~ 46 (75)
.-..++|++|.+|+.. ||+=+|-+.-..+...+..-+|-.-+.
T Consensus 140 d~y~~li~~YPIvsIEDpf~edD~e~w~~lt~~~g~~~~iVGDD 183 (295)
T PF00113_consen 140 DYYKDLIKKYPIVSIEDPFDEDDWEGWAKLTKRLGDKIQIVGDD 183 (295)
T ss_dssp HHHHHHHHHS-EEEEESSS-TT-HHHHHHHHHHHTTTSEEEEST
T ss_pred HHHHHHHHhcCeEEEEccccccchHHHHHHHHhhhcceeeeccc
Confidence 4567999999999887 999999999999999998556655444
No 156
>PRK08339 short chain dehydrogenase; Provisional
Probab=26.63 E-value=79 Score=22.02 Aligned_cols=22 Identities=23% Similarity=0.478 Sum_probs=19.6
Q ss_pred cceeeeecCCHHHHHHHHHHHH
Q 043093 16 VNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID 37 (75)
+.++++|++|++++..++..+.
T Consensus 60 ~~~~~~Dv~~~~~i~~~~~~~~ 81 (263)
T PRK08339 60 VSYIVADLTKREDLERTVKELK 81 (263)
T ss_pred eEEEEecCCCHHHHHHHHHHHH
Confidence 6789999999999999998764
No 157
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=26.62 E-value=1.3e+02 Score=21.55 Aligned_cols=24 Identities=17% Similarity=0.066 Sum_probs=20.2
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
=+.++++|++|++++..++..+-+
T Consensus 63 ~~~~~~~Dv~d~~~~~~~~~~~~~ 86 (306)
T PRK07792 63 KAVAVAGDISQRATADELVATAVG 86 (306)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHH
Confidence 467899999999999999887644
No 158
>PRK06482 short chain dehydrogenase; Provisional
Probab=26.44 E-value=89 Score=21.58 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=19.1
Q ss_pred CcceeeeecCCHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLI 36 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~I 36 (75)
-+.++++|++|.+++..++..+
T Consensus 49 ~~~~~~~D~~~~~~~~~~~~~~ 70 (276)
T PRK06482 49 RLWVLQLDVTDSAAVRAVVDRA 70 (276)
T ss_pred ceEEEEccCCCHHHHHHHHHHH
Confidence 3678899999999999988765
No 159
>PRK06197 short chain dehydrogenase; Provisional
Probab=26.03 E-value=86 Score=22.24 Aligned_cols=23 Identities=22% Similarity=0.251 Sum_probs=19.7
Q ss_pred CcceeeeecCCHHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID 37 (75)
-+.|+++|++|.+++..++..+-
T Consensus 68 ~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 68 DVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred ceEEEECCCCCHHHHHHHHHHHH
Confidence 46789999999999999988753
No 160
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=25.86 E-value=94 Score=21.14 Aligned_cols=22 Identities=18% Similarity=0.301 Sum_probs=19.1
Q ss_pred cceeeeecCCHHHHHHHHHHHH
Q 043093 16 VNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID 37 (75)
+.+++.|++|++++..++..+-
T Consensus 54 ~~~~~~D~~~~~~~~~~~~~~~ 75 (257)
T PRK07067 54 AIAVSLDVTRQDSIDRIVAAAV 75 (257)
T ss_pred eEEEEccCCCHHHHHHHHHHHH
Confidence 6688999999999999988763
No 161
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=25.68 E-value=1.8e+02 Score=21.97 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=24.4
Q ss_pred HHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhh
Q 043093 6 LCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 6 i~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.++....+ ..++++|++|++++..++..+.+.
T Consensus 249 l~~~~~~~~-~~~~~~Dv~~~~~~~~~~~~~~~~ 281 (450)
T PRK08261 249 LAAVANRVG-GTALALDITAPDAPARIAEHLAER 281 (450)
T ss_pred HHHHHHHcC-CeEEEEeCCCHHHHHHHHHHHHHh
Confidence 444544444 357899999999999999987653
No 162
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=25.52 E-value=1.7e+02 Score=22.60 Aligned_cols=39 Identities=28% Similarity=0.352 Sum_probs=32.6
Q ss_pred HHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhcCcc
Q 043093 5 ELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSNGYI 43 (75)
Q Consensus 5 ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~gY~ 43 (75)
.-++.+..-|.+.....|++|.|-|.++.+.+-+-+|-.
T Consensus 77 etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 77 ETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV 115 (300)
T ss_pred HHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence 344555555789999999999999999999999999954
No 163
>PRK08177 short chain dehydrogenase; Provisional
Probab=25.42 E-value=80 Score=21.16 Aligned_cols=23 Identities=26% Similarity=0.457 Sum_probs=19.8
Q ss_pred CcceeeeecCCHHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID 37 (75)
=+.+.+.|++|++++..+...+.
T Consensus 46 ~~~~~~~D~~d~~~~~~~~~~~~ 68 (225)
T PRK08177 46 GVHIEKLDMNDPASLDQLLQRLQ 68 (225)
T ss_pred ccceEEcCCCCHHHHHHHHHHhh
Confidence 46788999999999999988764
No 164
>PRK08263 short chain dehydrogenase; Provisional
Probab=25.40 E-value=97 Score=21.50 Aligned_cols=26 Identities=19% Similarity=0.112 Sum_probs=21.0
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
-+.+++.|++|++++..++..+-+..
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 50 RLLPLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CeeEEEccCCCHHHHHHHHHHHHHHc
Confidence 46678999999999999988875443
No 165
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=25.38 E-value=91 Score=23.98 Aligned_cols=33 Identities=12% Similarity=0.244 Sum_probs=26.7
Q ss_pred HHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHh
Q 043093 5 ELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 5 ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~ 38 (75)
.+++|-.+++ ..-..|||+++++|..+.+.+-+
T Consensus 44 ~M~~L~~~~g-l~~~kLDV~~~~~V~~v~~evr~ 76 (289)
T KOG1209|consen 44 PMAQLAIQFG-LKPYKLDVSKPEEVVTVSGEVRA 76 (289)
T ss_pred hHhhHHHhhC-CeeEEeccCChHHHHHHHHHHhh
Confidence 4667777888 45678999999999999987754
No 166
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=25.02 E-value=98 Score=20.54 Aligned_cols=23 Identities=26% Similarity=0.294 Sum_probs=19.6
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.+.+.|++|++++..++..+-+
T Consensus 57 ~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T PRK05565 57 AIAVKADVSSEEDVENLVEQIVE 79 (247)
T ss_pred EEEEECCCCCHHHHHHHHHHHHH
Confidence 78999999999999998876533
No 167
>PRK07832 short chain dehydrogenase; Provisional
Probab=24.97 E-value=1.1e+02 Score=21.24 Aligned_cols=25 Identities=28% Similarity=0.384 Sum_probs=20.4
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
.+.+.++|++|++++..+...+-..
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (272)
T PRK07832 51 VPEHRALDISDYDAVAAFAADIHAA 75 (272)
T ss_pred cceEEEeeCCCHHHHHHHHHHHHHh
Confidence 4567899999999999998887543
No 168
>PRK07856 short chain dehydrogenase; Provisional
Probab=24.91 E-value=1e+02 Score=20.99 Aligned_cols=22 Identities=36% Similarity=0.557 Sum_probs=19.3
Q ss_pred cceeeeecCCHHHHHHHHHHHH
Q 043093 16 VNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID 37 (75)
+.++++|++|++++..++..+-
T Consensus 49 ~~~~~~D~~~~~~~~~~~~~~~ 70 (252)
T PRK07856 49 AEFHAADVRDPDQVAALVDAIV 70 (252)
T ss_pred eEEEEccCCCHHHHHHHHHHHH
Confidence 5688999999999999988773
No 169
>PRK07074 short chain dehydrogenase; Provisional
Probab=24.72 E-value=1.1e+02 Score=20.82 Aligned_cols=22 Identities=18% Similarity=0.066 Sum_probs=19.0
Q ss_pred CcceeeeecCCHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLI 36 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~I 36 (75)
-+.++++|+.|++++..++..+
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~ 71 (257)
T PRK07074 50 RFVPVACDLTDAASLAAALANA 71 (257)
T ss_pred ceEEEEecCCCHHHHHHHHHHH
Confidence 3678899999999999888875
No 170
>cd06394 PBP1_iGluR_Kainate_KA1_2 N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the KA1 and KA2 subunits of Kainate receptor. N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the KA1 and KA2 subunits of Kainate receptor. While this N-terminal domain belongs to the periplasmic-binding fold type I superfamily, the glutamate-binding domain of the iGluR is structurally homologous to the periplasmic-binding fold type II. The LIVBP-like domain of iGluRs is thought to play a role in the initial assembly of iGluR subunits, but it is not well understood how this domain is arranged and functions in intact iGluR. There are five types of kainate receptors, GluR5, GluR6, GluR7, KA1, and KA2, which are structurally similar to AMPA and NMDA subunits of ionotropic glutamate receptors. KA1 and KA2 subunits can only form functional receptors with one of the GluR5-7 subunits. Moreover, GluR5-7 can also form functional homomeric receptor channels act
Probab=24.69 E-value=1.9e+02 Score=21.67 Aligned_cols=38 Identities=8% Similarity=0.200 Sum_probs=30.5
Q ss_pred hhHHHHHHhhhCCCcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 2 LTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 2 Ln~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.+||++||+-|+=-+|.++--+|+. +.+|...+....
T Consensus 121 ~~~Ai~dli~~~~W~~v~~iYe~d~~-l~~L~~~l~~~~ 158 (333)
T cd06394 121 ISVAVAGILNSFNYPTASLICAKAEC-LLRLEELLRQFL 158 (333)
T ss_pred HHHHHHHHHHhcCCCEEEEEEeCcHH-HHHHHHHHHhhc
Confidence 57899999999999999999888864 666666665543
No 171
>PRK05717 oxidoreductase; Validated
Probab=24.59 E-value=85 Score=21.39 Aligned_cols=22 Identities=27% Similarity=0.306 Sum_probs=18.3
Q ss_pred CcceeeeecCCHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLI 36 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~I 36 (75)
-+.++++|++|++++..++..+
T Consensus 57 ~~~~~~~Dl~~~~~~~~~~~~~ 78 (255)
T PRK05717 57 NAWFIAMDVADEAQVAAGVAEV 78 (255)
T ss_pred ceEEEEccCCCHHHHHHHHHHH
Confidence 4668999999999998877665
No 172
>PRK06484 short chain dehydrogenase; Validated
Probab=24.29 E-value=95 Score=23.78 Aligned_cols=24 Identities=8% Similarity=0.243 Sum_probs=20.2
Q ss_pred cceeeeecCCHHHHHHHHHHHHhh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.++++|++|++++..++..+.+.
T Consensus 53 ~~~~~~D~~~~~~~~~~~~~~~~~ 76 (520)
T PRK06484 53 HHALAMDVSDEAQIREGFEQLHRE 76 (520)
T ss_pred eeEEEeccCCHHHHHHHHHHHHHH
Confidence 467899999999999999887543
No 173
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=24.25 E-value=1e+02 Score=22.10 Aligned_cols=23 Identities=22% Similarity=0.307 Sum_probs=19.7
Q ss_pred CcceeeeecCCHHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID 37 (75)
-+.++++|++|.+++..++..+.
T Consensus 56 ~~~~~~~Dl~~~~~v~~~~~~~~ 78 (322)
T PRK07453 56 SYTIIHIDLGDLDSVRRFVDDFR 78 (322)
T ss_pred ceEEEEecCCCHHHHHHHHHHHH
Confidence 46789999999999999998743
No 174
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=23.98 E-value=1.1e+02 Score=20.20 Aligned_cols=24 Identities=17% Similarity=0.328 Sum_probs=20.3
Q ss_pred cceeeeecCCHHHHHHHHHHHHhh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a 39 (75)
+.+...|+.|++++..++..+...
T Consensus 56 ~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 56 ARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred eEEEEccCCCHHHHHHHHHHHHHH
Confidence 557779999999999999988654
No 175
>PRK08350 hypothetical protein; Provisional
Probab=23.93 E-value=91 Score=24.57 Aligned_cols=31 Identities=13% Similarity=0.325 Sum_probs=25.0
Q ss_pred HHHHHHhhhCCCcceeeeecCCHHHHHHHHHHH
Q 043093 4 KELCDVIEDYSLVNFSTLDIQDKESVAKLVKLI 36 (75)
Q Consensus 4 ~ai~~lIeDysLV~F~pLdi~deesi~~ll~~I 36 (75)
..+++++++|.+|+..||+ +| +.-..+.+.-
T Consensus 202 ~eli~l~~kYPIvsIEp~~-E~-~gw~~lt~~g 232 (341)
T PRK08350 202 EKVLNLVEDNNIAYIKPIG-DE-ELFLELIAGT 232 (341)
T ss_pred HHHHHHHHHCCEEEEEcCC-cc-hHHHHHHhcC
Confidence 3455999999999999999 55 8887777774
No 176
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=23.30 E-value=1.9e+02 Score=19.27 Aligned_cols=23 Identities=26% Similarity=0.368 Sum_probs=19.6
Q ss_pred CcceeeeecCCHHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID 37 (75)
=+.++++|++|++++..++..+-
T Consensus 57 ~~~~~~~D~~~~~~~~~~~~~~~ 79 (239)
T PRK07666 57 KVVIATADVSDYEEVTAAIEQLK 79 (239)
T ss_pred eEEEEECCCCCHHHHHHHHHHHH
Confidence 46688999999999999998764
No 177
>PRK14128 iraD DNA replication/recombination/repair protein; Provisional
Probab=23.22 E-value=68 Score=19.29 Aligned_cols=26 Identities=8% Similarity=0.023 Sum_probs=22.8
Q ss_pred eecCCHHHHHHHHHHHHhhcCcccCC
Q 043093 21 LDIQDKESVAKLVKLIDKSNGYIFAG 46 (75)
Q Consensus 21 Ldi~deesi~~ll~~ID~a~gY~~~~ 46 (75)
||+.||+.-..+...|-.||.-+|.-
T Consensus 1 ~~~~~~~~r~~i~~~I~~aI~~fEPR 26 (69)
T PRK14128 1 HNVSDKRLQSWYCRQLRSALLFHEPR 26 (69)
T ss_pred CCcccHHHHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999877654
No 178
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=22.99 E-value=1.2e+02 Score=20.89 Aligned_cols=24 Identities=13% Similarity=-0.078 Sum_probs=19.7
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
-+.+++.|+.|++++..++..+-+
T Consensus 52 ~~~~~~~D~~~~~~~~~~~~~~~~ 75 (262)
T TIGR03325 52 AVVGVEGDVRSLDDHKEAVARCVA 75 (262)
T ss_pred ceEEEEeccCCHHHHHHHHHHHHH
Confidence 367889999999999998887643
No 179
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=22.97 E-value=2.2e+02 Score=18.98 Aligned_cols=25 Identities=12% Similarity=0.154 Sum_probs=20.5
Q ss_pred CcceeeeecCCHHHHHHHHHHHHhh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDKS 39 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~a 39 (75)
=+.++.+|+.|++++..++..+-+.
T Consensus 54 ~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 54 KAIGVAMDVTDEEAINAGIDYAVET 78 (258)
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3667899999999999999887543
No 180
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=22.71 E-value=1.2e+02 Score=19.97 Aligned_cols=23 Identities=26% Similarity=0.187 Sum_probs=19.4
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.+++.|++|++++..++..+.+
T Consensus 57 ~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 57 ALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred eEEEEcCCCCHHHHHHHHHHHHH
Confidence 55778899999999999888754
No 181
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=22.64 E-value=1.1e+02 Score=22.10 Aligned_cols=24 Identities=21% Similarity=0.306 Sum_probs=20.2
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
-+.++++|++|.+++..+...+..
T Consensus 54 ~~~~~~~Dl~~~~~v~~~~~~~~~ 77 (314)
T TIGR01289 54 SYTIMHLDLGSLDSVRQFVQQFRE 77 (314)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHH
Confidence 356789999999999999988754
No 182
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=22.53 E-value=84 Score=23.44 Aligned_cols=35 Identities=26% Similarity=0.185 Sum_probs=26.1
Q ss_pred HHHHhh--hCCCcceeeeecCCHHHHHHHHHHHHhhc
Q 043093 6 LCDVIE--DYSLVNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 6 i~~lIe--DysLV~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.++.+ ...-+.+..+|++|++++..+++..|-.+
T Consensus 36 ~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVi 72 (386)
T PF03435_consen 36 AERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVI 72 (386)
T ss_dssp HHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEE
T ss_pred HHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEE
Confidence 344554 56778999999999999999999888655
No 183
>PRK08278 short chain dehydrogenase; Provisional
Probab=22.47 E-value=2.3e+02 Score=19.70 Aligned_cols=23 Identities=22% Similarity=0.070 Sum_probs=19.4
Q ss_pred CcceeeeecCCHHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID 37 (75)
=+.++++|++|++++..++..+-
T Consensus 63 ~~~~~~~D~~~~~~i~~~~~~~~ 85 (273)
T PRK08278 63 QALPLVGDVRDEDQVAAAVAKAV 85 (273)
T ss_pred ceEEEEecCCCHHHHHHHHHHHH
Confidence 36688999999999999988763
No 184
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=22.26 E-value=1.3e+02 Score=20.30 Aligned_cols=27 Identities=30% Similarity=0.359 Sum_probs=23.1
Q ss_pred CcceeeeecCC-HHHHHHHHHHHHhhcC
Q 043093 15 LVNFSTLDIQD-KESVAKLVKLIDKSNG 41 (75)
Q Consensus 15 LV~F~pLdi~d-eesi~~ll~~ID~a~g 41 (75)
.+.+.++|+++ ++++..++..+-...|
T Consensus 58 ~~~~~~~Dvs~~~~~v~~~~~~~~~~~g 85 (251)
T COG1028 58 RAAAVAADVSDDEESVEALVAAAEEEFG 85 (251)
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 57889999998 9999999998887633
No 185
>PRK06181 short chain dehydrogenase; Provisional
Probab=22.26 E-value=2.1e+02 Score=19.40 Aligned_cols=25 Identities=16% Similarity=0.206 Sum_probs=20.6
Q ss_pred CCcceeeeecCCHHHHHHHHHHHHh
Q 043093 14 SLVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 14 sLV~F~pLdi~deesi~~ll~~ID~ 38 (75)
+-+.+++.|+.|++++..++..+-+
T Consensus 50 ~~~~~~~~Dl~~~~~~~~~~~~~~~ 74 (263)
T PRK06181 50 GEALVVPTDVSDAEACERLIEAAVA 74 (263)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3467889999999999999887643
No 186
>cd04885 ACT_ThrD-I Tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes each of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=22.25 E-value=1.6e+02 Score=16.56 Aligned_cols=24 Identities=25% Similarity=0.509 Sum_probs=19.6
Q ss_pred eeeecCCHHHHHHHHHHHHhhcCcc
Q 043093 19 STLDIQDKESVAKLVKLIDKSNGYI 43 (75)
Q Consensus 19 ~pLdi~deesi~~ll~~ID~a~gY~ 43 (75)
+.+.+.+++.+..++..+.. .||.
T Consensus 42 v~ie~~~~~~~~~i~~~L~~-~G~~ 65 (68)
T cd04885 42 VGIQVPDREDLAELKERLEA-LGYP 65 (68)
T ss_pred EEEEeCCHHHHHHHHHHHHH-cCCC
Confidence 45788999999999999976 6674
No 187
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=22.21 E-value=1.9e+02 Score=17.46 Aligned_cols=24 Identities=21% Similarity=0.295 Sum_probs=19.3
Q ss_pred CcceeeeecCCHHHHHHHHHHHHh
Q 043093 15 LVNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~ID~ 38 (75)
=+.+++.|+++++++..++..+.+
T Consensus 54 ~~~~~~~D~~~~~~~~~~~~~~~~ 77 (180)
T smart00822 54 EVTVVACDVADRAALAAALAAIPA 77 (180)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHH
Confidence 355789999999999998877643
No 188
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=22.21 E-value=2e+02 Score=22.05 Aligned_cols=41 Identities=15% Similarity=0.160 Sum_probs=31.0
Q ss_pred HHHHHHhhhCCCcc--eeeeecCCHHHHHHHHHHHHhhcCccc
Q 043093 4 KELCDVIEDYSLVN--FSTLDIQDKESVAKLVKLIDKSNGYIF 44 (75)
Q Consensus 4 ~ai~~lIeDysLV~--F~pLdi~deesi~~ll~~ID~a~gY~~ 44 (75)
+++++|=.-++-++ |++.|++++.+++.....|=...|+.+
T Consensus 43 ~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iD 85 (261)
T KOG4169|consen 43 EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTID 85 (261)
T ss_pred HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceE
Confidence 34555544444444 999999999999999988888888765
No 189
>PRK08267 short chain dehydrogenase; Provisional
Probab=22.12 E-value=2e+02 Score=19.55 Aligned_cols=22 Identities=14% Similarity=0.101 Sum_probs=19.3
Q ss_pred CcceeeeecCCHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLI 36 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~I 36 (75)
-+.++++|++|++++..++..+
T Consensus 49 ~~~~~~~D~~~~~~v~~~~~~~ 70 (260)
T PRK08267 49 NAWTGALDVTDRAAWDAALADF 70 (260)
T ss_pred ceEEEEecCCCHHHHHHHHHHH
Confidence 5789999999999999988765
No 190
>PRK07035 short chain dehydrogenase; Provisional
Probab=21.34 E-value=2.2e+02 Score=19.20 Aligned_cols=23 Identities=17% Similarity=0.195 Sum_probs=19.1
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.++++|+.|.+++..++..+-+
T Consensus 59 ~~~~~~D~~~~~~~~~~~~~~~~ 81 (252)
T PRK07035 59 AEALACHIGEMEQIDALFAHIRE 81 (252)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHH
Confidence 56889999999999988887543
No 191
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=21.25 E-value=2.3e+02 Score=19.00 Aligned_cols=22 Identities=9% Similarity=0.185 Sum_probs=19.0
Q ss_pred cceeeeecCCHHHHHHHHHHHH
Q 043093 16 VNFSTLDIQDKESVAKLVKLID 37 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID 37 (75)
+.+++.|++|++++..++..+-
T Consensus 58 ~~~~~~Dl~~~~~~~~~~~~~~ 79 (262)
T PRK13394 58 AIGVAMDVTNEDAVNAGIDKVA 79 (262)
T ss_pred EEEEECCCCCHHHHHHHHHHHH
Confidence 5678999999999999988754
No 192
>PRK06841 short chain dehydrogenase; Provisional
Probab=21.07 E-value=1.4e+02 Score=20.19 Aligned_cols=23 Identities=22% Similarity=0.173 Sum_probs=19.4
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.++++|++|++++..++..+-+
T Consensus 63 ~~~~~~Dl~~~~~~~~~~~~~~~ 85 (255)
T PRK06841 63 AKGLVCDVSDSQSVEAAVAAVIS 85 (255)
T ss_pred eEEEEecCCCHHHHHHHHHHHHH
Confidence 45899999999999999887643
No 193
>PRK09072 short chain dehydrogenase; Provisional
Probab=20.83 E-value=1.1e+02 Score=20.94 Aligned_cols=22 Identities=5% Similarity=0.077 Sum_probs=19.2
Q ss_pred CcceeeeecCCHHHHHHHHHHH
Q 043093 15 LVNFSTLDIQDKESVAKLVKLI 36 (75)
Q Consensus 15 LV~F~pLdi~deesi~~ll~~I 36 (75)
=+.++++|+.|++++..+...+
T Consensus 54 ~~~~~~~D~~d~~~~~~~~~~~ 75 (263)
T PRK09072 54 RHRWVVADLTSEAGREAVLARA 75 (263)
T ss_pred ceEEEEccCCCHHHHHHHHHHH
Confidence 4678999999999999988776
No 194
>PRK05693 short chain dehydrogenase; Provisional
Probab=20.54 E-value=1.5e+02 Score=20.40 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=19.4
Q ss_pred cceeeeecCCHHHHHHHHHHHHh
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDK 38 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~ 38 (75)
+.++.+|++|++++..++..+-+
T Consensus 46 ~~~~~~Dl~~~~~~~~~~~~~~~ 68 (274)
T PRK05693 46 FTAVQLDVNDGAALARLAEELEA 68 (274)
T ss_pred CeEEEeeCCCHHHHHHHHHHHHH
Confidence 46789999999999999987743
No 195
>PRK06500 short chain dehydrogenase; Provisional
Probab=20.35 E-value=1.4e+02 Score=19.86 Aligned_cols=25 Identities=12% Similarity=0.066 Sum_probs=20.5
Q ss_pred cceeeeecCCHHHHHHHHHHHHhhc
Q 043093 16 VNFSTLDIQDKESVAKLVKLIDKSN 40 (75)
Q Consensus 16 V~F~pLdi~deesi~~ll~~ID~a~ 40 (75)
+.+.+.|++|.+++..++..+.+..
T Consensus 54 ~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 54 ALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred eEEEEecCCCHHHHHHHHHHHHHHh
Confidence 5688999999999999888776543
No 196
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=20.19 E-value=2.1e+02 Score=20.59 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=26.8
Q ss_pred hhHHHHHHhhhCCCcceeeeecCCHHHHHHHHHH
Q 043093 2 LTKELCDVIEDYSLVNFSTLDIQDKESVAKLVKL 35 (75)
Q Consensus 2 Ln~ai~~lIeDysLV~F~pLdi~deesi~~ll~~ 35 (75)
+-+++.++|..|++...+-++-.+++++..+...
T Consensus 67 l~~~l~~li~~~~~~~~vi~ssf~~~~l~~~~~~ 100 (192)
T cd08584 67 LELRLKKLLAEYGITNYFFLDMSVPDIIKYLENG 100 (192)
T ss_pred HHHHHHHHHHhcCCcceEEEEcCCHHHHHHHhcC
Confidence 3467889999999988888888888887776543
Done!