Query 043097
Match_columns 134
No_of_seqs 135 out of 1489
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 22:38:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043097.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043097hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jjm_A Glycosyl transferase, g 99.8 3.9E-20 1.3E-24 130.6 12.0 126 3-131 243-388 (394)
2 3c48_A Predicted glycosyltrans 99.8 1.7E-19 5.9E-24 128.7 11.7 128 3-131 278-428 (438)
3 2r60_A Glycosyl transferase, g 99.8 1.2E-19 4.1E-24 131.7 10.4 116 16-131 321-462 (499)
4 2x6q_A Trehalose-synthase TRET 99.8 1.9E-19 6.4E-24 127.9 10.7 126 3-129 264-415 (416)
5 3oy2_A Glycosyltransferase B73 99.8 5.4E-20 1.8E-24 130.5 7.9 128 3-131 217-393 (413)
6 3s28_A Sucrose synthase 1; gly 99.8 3.5E-19 1.2E-23 135.6 12.6 127 2-128 604-769 (816)
7 3fro_A GLGA glycogen synthase; 99.8 4.1E-19 1.4E-23 126.3 9.1 125 3-132 287-434 (439)
8 3okp_A GDP-mannose-dependent a 99.8 1.5E-18 5.1E-23 121.9 11.0 87 44-131 295-382 (394)
9 1rzu_A Glycogen synthase 1; gl 99.8 3.3E-18 1.1E-22 123.7 10.7 125 2-131 321-478 (485)
10 2qzs_A Glycogen synthase; glyc 99.7 8.2E-18 2.8E-22 121.6 9.0 124 3-131 323-479 (485)
11 2gek_A Phosphatidylinositol ma 99.7 8.7E-18 3E-22 118.6 8.6 87 44-131 299-386 (406)
12 2iw1_A Lipopolysaccharide core 99.7 9.4E-18 3.2E-22 117.2 8.4 122 3-129 230-372 (374)
13 3vue_A GBSS-I, granule-bound s 99.7 6E-18 2.1E-22 124.3 6.3 97 30-129 403-512 (536)
14 2iuy_A Avigt4, glycosyltransfe 99.7 5.1E-17 1.8E-21 112.7 8.5 81 44-132 257-339 (342)
15 2vsy_A XCC0866; transferase, g 99.7 5.1E-16 1.7E-20 114.2 11.9 120 2-132 407-563 (568)
16 3qhp_A Type 1 capsular polysac 99.6 1.1E-15 3.8E-20 96.0 8.7 74 44-120 90-166 (166)
17 3nb0_A Glycogen [starch] synth 99.6 9.2E-16 3.2E-20 114.1 6.4 101 30-131 520-636 (725)
18 2bfw_A GLGA glycogen synthase; 99.6 3.7E-15 1.3E-19 96.2 7.3 68 44-113 131-200 (200)
19 2x0d_A WSAF; GT4 family, trans 99.6 1.3E-16 4.4E-21 113.9 0.2 95 30-130 316-411 (413)
20 1f0k_A MURG, UDP-N-acetylgluco 99.6 3.7E-15 1.3E-19 104.0 5.7 110 17-131 225-360 (364)
21 1vgv_A UDP-N-acetylglucosamine 99.5 4.2E-15 1.4E-19 104.4 2.9 86 44-131 293-379 (384)
22 1uqt_A Alpha, alpha-trehalose- 99.5 2.4E-13 8.2E-18 98.8 12.1 81 44-128 367-454 (482)
23 2f9f_A First mannosyl transfer 99.5 4.7E-14 1.6E-18 89.8 4.5 90 3-96 52-165 (177)
24 3beo_A UDP-N-acetylglucosamine 99.4 1E-14 3.5E-19 102.0 0.7 80 45-126 294-374 (375)
25 2xci_A KDO-transferase, 3-deox 99.3 1.4E-12 4.9E-17 91.9 5.5 109 3-114 227-366 (374)
26 2hy7_A Glucuronosyltransferase 99.2 2.8E-12 9.5E-17 91.3 1.6 85 29-129 285-380 (406)
27 3t5t_A Putative glycosyltransf 99.1 2.5E-10 8.5E-15 83.0 8.8 83 44-129 387-474 (496)
28 3rhz_A GTF3, nucleotide sugar 99.1 2E-10 6.7E-15 80.2 5.3 73 45-121 257-329 (339)
29 1v4v_A UDP-N-acetylglucosamine 99.0 2.7E-10 9.1E-15 79.8 4.6 80 45-130 286-366 (376)
30 3otg_A CALG1; calicheamicin, T 98.9 2.7E-09 9.2E-14 75.4 6.1 83 44-127 320-409 (412)
31 2iyf_A OLED, oleandomycin glyc 98.6 2E-08 6.9E-13 71.5 4.3 84 44-128 311-401 (430)
32 3dzc_A UDP-N-acetylglucosamine 98.6 7.8E-08 2.7E-12 68.3 5.7 76 44-125 318-394 (396)
33 3ot5_A UDP-N-acetylglucosamine 98.5 3.7E-08 1.3E-12 70.1 3.2 79 45-129 313-392 (403)
34 4fzr_A SSFS6; structural genom 98.5 5.5E-08 1.9E-12 68.6 2.2 78 44-122 312-396 (398)
35 3tsa_A SPNG, NDP-rhamnosyltran 98.5 1.6E-07 5.5E-12 66.0 4.6 82 44-126 298-388 (391)
36 3q3e_A HMW1C-like glycosyltran 98.4 6.1E-08 2.1E-12 72.1 1.5 108 19-129 488-624 (631)
37 3s2u_A UDP-N-acetylglucosamine 98.4 3.1E-07 1.1E-11 64.5 4.4 83 44-127 264-357 (365)
38 3ia7_A CALG4; glycosysltransfe 98.3 8.9E-07 3.1E-11 62.2 5.4 83 44-127 309-399 (402)
39 2p6p_A Glycosyl transferase; X 98.2 3.3E-06 1.1E-10 59.2 6.9 82 44-126 291-379 (384)
40 3rsc_A CALG2; TDP, enediyne, s 98.2 2.1E-06 7.1E-11 60.8 5.7 83 44-127 325-414 (415)
41 3oti_A CALG3; calicheamicin, T 98.1 5.4E-06 1.9E-10 58.4 6.5 77 44-125 311-396 (398)
42 2yjn_A ERYCIII, glycosyltransf 98.1 5.1E-06 1.7E-10 59.4 6.2 82 44-126 347-435 (441)
43 2o6l_A UDP-glucuronosyltransfe 97.9 8.5E-06 2.9E-10 50.9 3.7 56 44-99 98-160 (170)
44 2iya_A OLEI, oleandomycin glyc 97.7 8.2E-05 2.8E-09 52.8 6.5 82 44-126 333-421 (424)
45 4hwg_A UDP-N-acetylglucosamine 97.6 6.3E-06 2.2E-10 58.4 -0.8 80 45-125 294-374 (385)
46 1iir_A Glycosyltransferase GTF 97.6 0.00019 6.5E-09 50.9 6.7 80 44-129 313-399 (415)
47 4gyw_A UDP-N-acetylglucosamine 97.4 0.0015 5E-08 49.9 9.5 115 16-131 565-708 (723)
48 4amg_A Snogd; transferase, pol 97.3 0.00014 4.7E-09 51.0 2.6 78 44-123 316-397 (400)
49 1rrv_A Glycosyltransferase GTF 97.0 0.00018 6.1E-09 51.0 1.4 61 44-105 314-381 (416)
50 3h4t_A Glycosyltransferase GTF 96.8 0.0012 4.1E-08 46.7 4.2 80 44-126 296-382 (404)
51 2c1x_A UDP-glucose flavonoid 3 96.4 0.0042 1.4E-07 44.8 4.9 64 44-108 355-426 (456)
52 2pq6_A UDP-glucuronosyl/UDP-gl 95.5 0.054 1.8E-06 39.3 7.2 64 44-108 383-453 (482)
53 3hbf_A Flavonoid 3-O-glucosylt 94.3 0.033 1.1E-06 40.3 3.3 63 44-107 357-427 (454)
54 2vch_A Hydroquinone glucosyltr 91.8 0.2 6.8E-06 36.4 4.2 50 44-93 369-429 (480)
55 1l5w_A Maltodextrin phosphoryl 89.2 0.38 1.3E-05 37.2 3.9 78 48-130 646-732 (796)
56 2acv_A Triterpene UDP-glucosyl 88.7 1.3 4.6E-05 31.9 6.3 49 44-92 362-424 (463)
57 2gj4_A Glycogen phosphorylase, 87.8 0.49 1.7E-05 36.8 3.7 78 48-130 670-756 (824)
58 2c4m_A Glycogen phosphorylase; 81.0 0.25 8.5E-06 38.2 -0.5 78 48-130 636-721 (796)
59 1rcu_A Conserved hypothetical 74.4 1.4 4.6E-05 28.2 1.5 62 28-90 118-192 (195)
60 2nzw_A Alpha1,3-fucosyltransfe 73.8 5.8 0.0002 28.0 4.7 52 48-100 254-307 (371)
61 3oao_A Uncharacterized protein 62.7 23 0.00079 21.4 5.3 35 95-129 46-80 (147)
62 3h5i_A Response regulator/sens 59.3 22 0.00076 20.2 5.1 42 51-92 77-123 (140)
63 3gi1_A LBP, laminin-binding pr 56.3 41 0.0014 22.5 6.1 31 79-109 129-161 (286)
64 3ehd_A Uncharacterized conserv 56.3 12 0.00041 23.1 3.2 19 72-91 143-161 (162)
65 3n53_A Response regulator rece 55.5 23 0.0008 20.0 4.4 43 51-93 75-122 (140)
66 2lpm_A Two-component response 51.0 3.7 0.00013 23.9 0.3 41 51-91 78-120 (123)
67 3nhm_A Response regulator; pro 50.9 26 0.0009 19.4 4.1 43 51-93 76-122 (133)
68 3to5_A CHEY homolog; alpha(5)b 50.4 7.1 0.00024 23.0 1.5 42 51-92 86-132 (134)
69 3kcn_A Adenylate cyclase homol 49.8 9.4 0.00032 22.2 2.0 46 49-94 73-124 (151)
70 3l7i_A Teichoic acid biosynthe 49.7 21 0.00072 27.2 4.3 47 45-93 627-683 (729)
71 3cu5_A Two component transcrip 49.6 34 0.0012 19.4 4.5 43 50-92 75-122 (141)
72 1qkk_A DCTD, C4-dicarboxylate 46.4 21 0.00071 20.7 3.2 44 50-93 73-121 (155)
73 3l49_A ABC sugar (ribose) tran 44.9 60 0.0021 20.9 6.0 14 48-61 82-95 (291)
74 1xvl_A Mn transporter, MNTC pr 44.7 18 0.00062 24.8 3.0 80 28-109 94-184 (321)
75 3cg4_A Response regulator rece 44.2 32 0.0011 19.3 3.7 43 50-92 79-126 (142)
76 3hdg_A Uncharacterized protein 44.1 36 0.0012 19.0 3.9 45 49-93 76-125 (137)
77 1toa_A Tromp-1, protein (perip 42.2 18 0.00062 24.7 2.7 94 29-126 88-191 (313)
78 1s8n_A Putative antiterminator 42.0 58 0.002 19.9 8.2 30 65-94 102-132 (205)
79 3cx3_A Lipoprotein; zinc-bindi 41.2 30 0.001 23.1 3.6 31 79-109 127-159 (284)
80 3f6c_A Positive transcription 40.7 46 0.0016 18.4 5.5 44 50-93 72-120 (134)
81 1qo0_D AMIR; binding protein, 40.4 48 0.0016 20.1 4.3 44 51-94 78-126 (196)
82 3eul_A Possible nitrate/nitrit 38.7 55 0.0019 18.7 4.4 44 50-93 87-135 (152)
83 2qv0_A Protein MRKE; structura 38.2 54 0.0018 18.4 5.8 42 52-93 83-127 (143)
84 3u3z_A Microcephalin; DNA repa 37.7 22 0.00074 22.5 2.4 58 3-60 11-76 (199)
85 1pq4_A Periplasmic binding pro 37.7 42 0.0014 22.5 3.9 31 79-109 140-172 (291)
86 3hzh_A Chemotaxis response reg 37.7 55 0.0019 18.9 4.1 45 48-92 107-156 (157)
87 3n0r_A Response regulator; sig 37.1 37 0.0013 22.5 3.6 44 48-92 230-276 (286)
88 1l0b_A BRCA1; TANDEM-BRCT, thr 36.9 21 0.00072 22.7 2.2 58 2-59 6-75 (229)
89 3q9s_A DNA-binding response re 35.6 86 0.0029 20.0 5.9 42 51-92 107-153 (249)
90 3hv2_A Response regulator/HD d 35.1 62 0.0021 18.5 4.1 45 49-93 83-133 (153)
91 1ys7_A Transcriptional regulat 34.9 65 0.0022 20.0 4.3 43 50-92 77-124 (233)
92 2nte_A BARD-1, BRCA1-associate 34.8 27 0.00091 22.0 2.4 58 3-60 2-68 (210)
93 2prs_A High-affinity zinc upta 34.5 10 0.00035 25.4 0.4 31 79-109 124-156 (284)
94 2lnd_A De novo designed protei 34.3 54 0.0019 17.6 3.2 45 48-92 47-100 (112)
95 3ujp_A Mn transporter subunit; 34.2 30 0.001 23.6 2.7 31 79-109 138-170 (307)
96 1mb3_A Cell division response 33.6 33 0.0011 18.6 2.6 42 51-92 74-120 (124)
97 3sqd_A PAX-interacting protein 32.9 31 0.0011 22.1 2.5 56 3-60 16-79 (219)
98 3jte_A Response regulator rece 31.9 70 0.0024 17.9 4.9 45 49-93 74-123 (143)
99 2jba_A Phosphate regulon trans 31.6 26 0.00088 19.2 1.8 42 51-92 75-121 (127)
100 2iz6_A Molybdenum cofactor car 31.1 7.8 0.00027 24.2 -0.6 48 45-92 124-173 (176)
101 3f6p_A Transcriptional regulat 31.0 67 0.0023 17.4 5.6 42 51-92 72-118 (120)
102 2f62_A Nucleoside 2-deoxyribos 31.0 92 0.0031 19.0 4.5 11 48-58 94-104 (161)
103 1yio_A Response regulatory pro 30.8 92 0.0031 18.9 6.9 44 50-93 74-122 (208)
104 3c97_A Signal transduction his 30.7 74 0.0025 17.8 4.6 41 52-92 87-129 (140)
105 2lo3_A SAGA-associated factor 30.2 15 0.00052 17.1 0.5 13 48-60 20-32 (44)
106 4dad_A Putative pilus assembly 30.2 77 0.0026 17.8 4.9 43 50-92 93-140 (146)
107 3klo_A Transcriptional regulat 29.7 51 0.0017 20.5 3.2 44 49-92 80-128 (225)
108 1t15_A Breast cancer type 1 su 29.6 26 0.00088 22.0 1.7 57 3-59 4-72 (214)
109 3ffs_A Inosine-5-monophosphate 29.5 65 0.0022 22.9 3.9 66 27-92 11-89 (400)
110 2b8i_A PAS factor; four helix 28.6 70 0.0024 16.8 5.3 47 82-130 8-55 (77)
111 2fcg_F Cationic, antibacterial 27.9 40 0.0014 13.8 2.4 18 114-131 5-22 (26)
112 3snk_A Response regulator CHEY 27.8 21 0.00073 20.0 1.0 42 51-92 86-132 (135)
113 3gt7_A Sensor protein; structu 27.5 24 0.00082 20.5 1.2 42 51-92 80-126 (154)
114 1dc7_A NTRC, nitrogen regulati 26.9 35 0.0012 18.5 1.8 42 50-91 73-119 (124)
115 3uug_A Multiple sugar-binding 26.5 1.4E+02 0.0048 19.6 6.7 15 47-61 79-93 (330)
116 3l6u_A ABC-type sugar transpor 26.1 1.3E+02 0.0046 19.2 7.2 14 48-61 85-98 (293)
117 1mvo_A PHOP response regulator 26.1 79 0.0027 17.4 3.3 43 51-93 74-121 (136)
118 3t8y_A CHEB, chemotaxis respon 25.7 1E+02 0.0036 17.9 6.9 28 65-92 117-154 (164)
119 3i42_A Response regulator rece 25.4 60 0.0021 17.7 2.7 44 50-93 75-122 (127)
120 2zay_A Response regulator rece 25.4 16 0.00056 20.8 0.2 43 50-92 80-127 (147)
121 3dmy_A Protein FDRA; predicted 25.2 2E+02 0.0069 21.0 6.6 88 2-91 140-235 (480)
122 2gwr_A DNA-binding response re 25.2 64 0.0022 20.3 3.0 41 52-92 76-121 (238)
123 3heb_A Response regulator rece 24.7 31 0.0011 19.8 1.4 43 49-91 86-133 (152)
124 3o1i_D Periplasmic protein TOR 24.7 1.4E+02 0.0049 19.2 8.2 31 30-61 65-96 (304)
125 3grc_A Sensor protein, kinase; 24.6 59 0.002 18.1 2.6 44 49-92 77-126 (140)
126 3miz_A Putative transcriptiona 24.6 1.4E+02 0.0047 19.4 4.7 15 46-60 86-100 (301)
127 3lua_A Response regulator rece 24.5 99 0.0034 17.2 6.1 46 49-94 78-128 (140)
128 3l46_A Protein ECT2; alternati 24.4 67 0.0023 18.3 2.7 27 1-27 22-48 (112)
129 3eqz_A Response regulator; str 24.3 95 0.0033 16.9 6.2 26 69-94 100-126 (135)
130 3gl9_A Response regulator; bet 24.2 90 0.0031 17.0 3.3 42 51-92 75-121 (122)
131 4e7p_A Response regulator; DNA 24.1 1.1E+02 0.0036 17.4 6.2 44 50-93 92-140 (150)
132 3cg0_A Response regulator rece 23.9 31 0.001 19.3 1.2 42 51-92 81-127 (140)
133 3kto_A Response regulator rece 23.3 90 0.0031 17.3 3.2 42 51-92 79-125 (136)
134 3huu_A Transcription regulator 23.2 1.6E+02 0.0055 19.1 6.3 14 48-61 102-115 (305)
135 3m9w_A D-xylose-binding peripl 23.0 1.6E+02 0.0056 19.1 7.4 14 48-61 79-92 (313)
136 1x2l_A CUT-like 2, homeobox pr 22.7 6.7 0.00023 22.2 -1.8 28 91-118 56-83 (101)
137 1urq_A M-tomosyn isoform; tran 22.6 87 0.003 15.8 4.8 44 81-124 18-61 (63)
138 1wh8_A CUT-like 2, homeobox pr 22.4 7.2 0.00025 22.5 -1.7 14 79-92 28-41 (111)
139 2o1e_A YCDH; alpha-beta protei 22.1 50 0.0017 22.4 2.1 31 79-109 140-172 (312)
140 3eh7_A 4-hydroxybutyrate COA-t 22.0 2.3E+02 0.0077 20.4 6.5 28 79-107 405-432 (434)
141 2qzj_A Two-component response 21.9 62 0.0021 18.1 2.3 41 52-92 75-120 (136)
142 3al2_A DNA topoisomerase 2-bin 21.7 44 0.0015 21.7 1.7 55 4-60 10-75 (235)
143 8abp_A L-arabinose-binding pro 21.5 1.4E+02 0.0049 19.2 4.3 31 30-60 59-90 (306)
144 3h1g_A Chemotaxis protein CHEY 21.5 1.1E+02 0.0038 16.7 3.6 42 51-92 80-126 (129)
145 1wh6_A CUT-like 2, homeobox pr 21.4 6.4 0.00022 22.3 -2.0 14 79-92 18-31 (101)
146 1i4n_A Indole-3-glycerol phosp 21.0 1.8E+02 0.0063 19.1 4.6 56 2-62 124-181 (251)
147 2rdm_A Response regulator rece 20.7 88 0.003 17.0 2.8 21 73-93 102-123 (132)
148 2ayx_A Sensor kinase protein R 20.4 75 0.0026 20.4 2.7 44 49-92 198-246 (254)
149 3bu8_A Telomeric repeat-bindin 20.2 1.9E+02 0.0066 18.9 5.0 23 108-130 167-189 (235)
150 1dbw_A Transcriptional regulat 20.1 1.2E+02 0.004 16.4 6.4 43 50-92 73-120 (126)
151 2fn9_A Ribose ABC transporter, 20.0 1.8E+02 0.0062 18.6 4.8 14 48-61 79-92 (290)
No 1
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.83 E-value=3.9e-20 Score=130.57 Aligned_cols=126 Identities=22% Similarity=0.329 Sum_probs=105.3
Q ss_pred ceEeecCccchhhHHHHHHHHHHcCCCCeEEecccc---------ccccC----------CchhhhhcCCCEEeccCCCc
Q 043097 3 DVILVNSKFTATTFANTFKKLHARGIHPVVLYPAVN---------VYQFD----------KPHSSMAAYKPVIACDSGGP 63 (134)
Q Consensus 3 ~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~g~~---------~~~~~----------~~~eAma~G~pvi~s~~~~~ 63 (134)
.+++++.+. ...++.+.+.++++.+.|.|.|.. .+.+. .+.|||+||+|||+|+.++.
T Consensus 243 ~l~i~G~g~---~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~ 319 (394)
T 2jjm_A 243 KLLLVGDGP---EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGI 319 (394)
T ss_dssp EEEEECCCT---THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTS
T ss_pred EEEEECCch---HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCCh
Confidence 467777543 235577778877887788888752 12222 46689999999999999999
Q ss_pred ccceeeCceEEEecC-CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcC
Q 043097 64 VETIKNEVVGFLCNP-TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLNRLLAYVARG 131 (134)
Q Consensus 64 ~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 131 (134)
.|++.++.+|+++++ |+++++++|.+++.+++.+.+|++++++.+.++|+|+.+++++.++|++++.+
T Consensus 320 ~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 388 (394)
T 2jjm_A 320 PEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRD 388 (394)
T ss_dssp TTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC--
T ss_pred HHHhhcCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 999999889999998 99999999999999999999999999999988999999999999999998764
No 2
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.81 E-value=1.7e-19 Score=128.65 Aligned_cols=128 Identities=20% Similarity=0.248 Sum_probs=105.4
Q ss_pred ceEeecCccc-hhhHHHHHHHHHHcCCCCeEEecccc-----------ccccC----------CchhhhhcCCCEEeccC
Q 043097 3 DVILVNSKFT-ATTFANTFKKLHARGIHPVVLYPAVN-----------VYQFD----------KPHSSMAAYKPVIACDS 60 (134)
Q Consensus 3 ~~v~~~s~~~-~~~~~~~~~~~~~~~~~~~v~~~g~~-----------~~~~~----------~~~eAma~G~pvi~s~~ 60 (134)
.+++++.... ....+.+.+.+.++++.+.|.|.|.- .+.+. .++|||+||+|||+++.
T Consensus 278 ~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~ 357 (438)
T 3c48_A 278 RVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARV 357 (438)
T ss_dssp EEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESC
T ss_pred EEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCC
Confidence 4667775211 23445677888888888889888861 22222 46689999999999999
Q ss_pred CCcccceeeCceEEEecC-CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcC
Q 043097 61 GGPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLNRLLAYVARG 131 (134)
Q Consensus 61 ~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 131 (134)
++..+++.++.+|+++++ |+++++++|.+++.++..+.+|++++++.+.+ |+|+.+++++.++|++++.+
T Consensus 358 ~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 358 GGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp TTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHT
T ss_pred CChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhh
Confidence 999999999889999988 99999999999999999999999999999976 99999999999999998764
No 3
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.81 E-value=1.2e-19 Score=131.74 Aligned_cols=116 Identities=16% Similarity=0.292 Sum_probs=104.2
Q ss_pred HHHHHHHHHHcCCCCeEEeccc-----------cc----cccC----------CchhhhhcCCCEEeccCCCcccceeeC
Q 043097 16 FANTFKKLHARGIHPVVLYPAV-----------NV----YQFD----------KPHSSMAAYKPVIACDSGGPVETIKNE 70 (134)
Q Consensus 16 ~~~~~~~~~~~~~~~~v~~~g~-----------~~----~~~~----------~~~eAma~G~pvi~s~~~~~~e~i~~~ 70 (134)
.+++.+.+.++++.+.|.|.|. .. +.+. .++|||+||+|||+|+.++..|++.++
T Consensus 321 ~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~ 400 (499)
T 2r60_A 321 LGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGG 400 (499)
T ss_dssp HHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGG
T ss_pred HHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCC
Confidence 6778888999999888988886 34 5544 355799999999999999999999998
Q ss_pred ceEEEecC-CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcC
Q 043097 71 VVGFLCNP-TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLNRLLAYVARG 131 (134)
Q Consensus 71 ~~g~~~~~-~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 131 (134)
.+|+++++ |+++++++|.+++.++..+.++++++++.+.++|+|+.+++++.++|++++.+
T Consensus 401 ~~g~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 401 KYGVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp TSSEEECTTCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred ceEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 88999988 99999999999999999999999999999988899999999999999998764
No 4
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.81 E-value=1.9e-19 Score=127.90 Aligned_cols=126 Identities=21% Similarity=0.205 Sum_probs=103.9
Q ss_pred ceEeecCccc--hhhHHHHHHHHHHcCCCCeEEeccc--------------cccccC----------CchhhhhcCCCEE
Q 043097 3 DVILVNSKFT--ATTFANTFKKLHARGIHPVVLYPAV--------------NVYQFD----------KPHSSMAAYKPVI 56 (134)
Q Consensus 3 ~~v~~~s~~~--~~~~~~~~~~~~~~~~~~~v~~~g~--------------~~~~~~----------~~~eAma~G~pvi 56 (134)
.+++++.+.. ......+.+.+..+++.+.|.|.|. ..+.+. .++|||+||+|||
T Consensus 264 ~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI 343 (416)
T 2x6q_A 264 QLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVI 343 (416)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEE
T ss_pred EEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEE
Confidence 5677776543 2233456677777788888888772 122222 3668999999999
Q ss_pred eccCCCcccceeeCceEEEecCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 043097 57 ACDSGGPVETIKNEVVGFLCNPTPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLNRLLAYVA 129 (134)
Q Consensus 57 ~s~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 129 (134)
+|+.++..|++.++.+|++++ |+++++++|..++.++..+..+++++++++.++|+|+.+++++.++|++++
T Consensus 344 ~~~~~g~~e~i~~~~~g~l~~-d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 344 GRAVGGIKFQIVDGETGFLVR-DANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp EESCHHHHHHCCBTTTEEEES-SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred EccCCCChhheecCCCeEEEC-CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 999999999999998999998 999999999999999999999999999999889999999999999998764
No 5
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.81 E-value=5.4e-20 Score=130.50 Aligned_cols=128 Identities=13% Similarity=0.201 Sum_probs=104.1
Q ss_pred ceEeecCccchh---hHHHHHHHHHHcCCCCe-------EEeccc-----------cccccC----------Cchhhhhc
Q 043097 3 DVILVNSKFTAT---TFANTFKKLHARGIHPV-------VLYPAV-----------NVYQFD----------KPHSSMAA 51 (134)
Q Consensus 3 ~~v~~~s~~~~~---~~~~~~~~~~~~~~~~~-------v~~~g~-----------~~~~~~----------~~~eAma~ 51 (134)
.+++++.+.... ..+.+.+.+.++++.+. +++.|. ..+.+. .+.|||+|
T Consensus 217 ~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~ 296 (413)
T 3oy2_A 217 KVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVL 296 (413)
T ss_dssp CEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTT
T ss_pred EEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHc
Confidence 567777554321 23557777788888875 777785 122222 46789999
Q ss_pred CCCEEeccCCCcccceeeCce---------------EE--EecC-CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcC
Q 043097 52 YKPVIACDSGGPVETIKNEVV---------------GF--LCNP-TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFS 113 (134)
Q Consensus 52 G~pvi~s~~~~~~e~i~~~~~---------------g~--~~~~-~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s 113 (134)
|+|||+|+.++..|++.++.+ |+ ++++ |+++++++| +++.+++.+.+|++++++++.++|+
T Consensus 297 G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs 375 (413)
T 3oy2_A 297 GKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPT 375 (413)
T ss_dssp TCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCC
T ss_pred CCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999988776 77 7776 999999999 9999999999999999999988999
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 043097 114 TKIFGQHLNRLLAYVARG 131 (134)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~ 131 (134)
|+.+++++.++|++++.+
T Consensus 376 ~~~~~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 376 WDDISSDIIDFFNSLLRV 393 (413)
T ss_dssp HHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998764
No 6
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.81 E-value=3.5e-19 Score=135.65 Aligned_cols=127 Identities=17% Similarity=0.288 Sum_probs=107.8
Q ss_pred cceEeecCcc--------chhhHHHHHHHHHHcCCCCeEEeccc----------------cccccC----------Cchh
Q 043097 2 ADVILVNSKF--------TATTFANTFKKLHARGIHPVVLYPAV----------------NVYQFD----------KPHS 47 (134)
Q Consensus 2 a~~v~~~s~~--------~~~~~~~~~~~~~~~~~~~~v~~~g~----------------~~~~~~----------~~~e 47 (134)
..+++++.+. ......++.+.+.++++.+.|.|+|. ..+.|. .++|
T Consensus 604 v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllE 683 (816)
T 3s28_A 604 ANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVE 683 (816)
T ss_dssp CEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHH
T ss_pred eEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHH
Confidence 3577888765 12356778899999999999999882 123333 3557
Q ss_pred hhhcCCCEEeccCCCcccceeeCceEEEecC-CHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043097 48 SMAAYKPVIACDSGGPVETIKNEVVGFLCNP-TPQEFSLSMAKLI----QEPQMAKKMGENARHHVMESFSTKIFGQHLN 122 (134)
Q Consensus 48 Ama~G~pvi~s~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 122 (134)
||+||+|||+|+.|+..|++.++.+|+++++ |+++++++|.+++ .|+..+..|++++++.+.++|||+.+++++.
T Consensus 684 AMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll 763 (816)
T 3s28_A 684 AMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLL 763 (816)
T ss_dssp HHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred HHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999999999999999999999999999998 9999999997776 8999999999999999989999999999999
Q ss_pred HHHHHH
Q 043097 123 RLLAYV 128 (134)
Q Consensus 123 ~~~~~~ 128 (134)
++|+..
T Consensus 764 ~lY~~~ 769 (816)
T 3s28_A 764 TLTGVY 769 (816)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999864
No 7
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.79 E-value=4.1e-19 Score=126.25 Aligned_cols=125 Identities=18% Similarity=0.151 Sum_probs=102.8
Q ss_pred ceEeecCccchhhHHHHHHHHHHcCCCCeEEeccc-----------cccccC----------CchhhhhcCCCEEeccCC
Q 043097 3 DVILVNSKFTATTFANTFKKLHARGIHPVVLYPAV-----------NVYQFD----------KPHSSMAAYKPVIACDSG 61 (134)
Q Consensus 3 ~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~g~-----------~~~~~~----------~~~eAma~G~pvi~s~~~ 61 (134)
.+++++.+. ....+.+.+.+.+++ +.+++.|. ..+.+. .+.|||+||+|||+|+.+
T Consensus 287 ~l~i~G~g~-~~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~ 363 (439)
T 3fro_A 287 RFIIIGKGD-PELEGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG 363 (439)
T ss_dssp EEEEECCCC-HHHHHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESST
T ss_pred EEEEEcCCC-hhHHHHHHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCC
Confidence 466777543 233355777777766 77788883 122222 466899999999999999
Q ss_pred CcccceeeCceEEEecC-CHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcCC
Q 043097 62 GPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ-EPQMAKKMGENARHHVMESFSTKIFGQHLNRLLAYVARGK 132 (134)
Q Consensus 62 ~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 132 (134)
+..|++.++ +|+++++ |+++++++|.+++. +++.+..+++++++.+ ++|+|+.+++++.++|++++.+.
T Consensus 364 ~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~ 434 (439)
T 3fro_A 364 GLRDIITNE-TGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRA 434 (439)
T ss_dssp HHHHHCCTT-TCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCB
T ss_pred CcceeEEcC-ceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhh
Confidence 999999877 8999998 99999999999999 9999999999999999 78999999999999999988654
No 8
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.78 E-value=1.5e-18 Score=121.94 Aligned_cols=87 Identities=29% Similarity=0.408 Sum_probs=81.5
Q ss_pred CchhhhhcCCCEEeccCCCcccceeeCceEEEecC-CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043097 44 KPHSSMAAYKPVIACDSGGPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLN 122 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 122 (134)
.++|||++|+|||+++.++..+++.++ +|+++++ |+++++++|.+++.+++.+.++++++++.+.++|+|+.+++++.
T Consensus 295 ~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 373 (394)
T 3okp_A 295 VYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLT 373 (394)
T ss_dssp HHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 577899999999999999999999988 8999998 99999999999999999999999999999988999999999999
Q ss_pred HHHHHHhcC
Q 043097 123 RLLAYVARG 131 (134)
Q Consensus 123 ~~~~~~~~~ 131 (134)
++|+++..+
T Consensus 374 ~~~~~~~r~ 382 (394)
T 3okp_A 374 NILQSEPRK 382 (394)
T ss_dssp HHHHSCCC-
T ss_pred HHHHHhccC
Confidence 999987643
No 9
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.76 E-value=3.3e-18 Score=123.65 Aligned_cols=125 Identities=10% Similarity=0.085 Sum_probs=97.9
Q ss_pred cceEeecCccchhhHHHHHHHHHHcCCCCeEEecccc----------cccc----------CCchhhhhcCCCEEeccCC
Q 043097 2 ADVILVNSKFTATTFANTFKKLHARGIHPVVLYPAVN----------VYQF----------DKPHSSMAAYKPVIACDSG 61 (134)
Q Consensus 2 a~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~g~~----------~~~~----------~~~~eAma~G~pvi~s~~~ 61 (134)
..+++++.+. ....+.+.+.+.+++ ....++.|.. .|.| ..++|||+||+|||+|+.+
T Consensus 321 ~~l~ivG~g~-~~~~~~l~~~~~~~~-~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~g 398 (485)
T 1rzu_A 321 GRLVVLGAGD-VALEGALLAAASRHH-GRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG 398 (485)
T ss_dssp CEEEEEECBC-HHHHHHHHHHHHHTT-TTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH
T ss_pred ceEEEEeCCc-hHHHHHHHHHHHhCC-CcEEEecCCCHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCC
Confidence 3567777652 223455666666654 3333467752 1122 2467899999999999999
Q ss_pred CcccceeeC---------ceEEEecC-CHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043097 62 GPVETIKNE---------VVGFLCNP-TPQEFSLSMAKLI---QEPQMAKKMGENARHHVMESFSTKIFGQHLNRLLAYV 128 (134)
Q Consensus 62 ~~~e~i~~~---------~~g~~~~~-~~~~l~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 128 (134)
+..|++.++ .+|+++++ |+++++++|.+++ .|+..+.+|++++++ ++|||+.+++++.++|+++
T Consensus 399 g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~~ 475 (485)
T 1rzu_A 399 GLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQL 475 (485)
T ss_dssp HHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHHH
T ss_pred ChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH---HhCChHHHHHHHHHHHHHh
Confidence 999999987 78999988 9999999999999 799999999999874 7899999999999999998
Q ss_pred hcC
Q 043097 129 ARG 131 (134)
Q Consensus 129 ~~~ 131 (134)
+.+
T Consensus 476 ~~~ 478 (485)
T 1rzu_A 476 ISK 478 (485)
T ss_dssp TC-
T ss_pred hCC
Confidence 764
No 10
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.74 E-value=8.2e-18 Score=121.58 Aligned_cols=124 Identities=10% Similarity=0.050 Sum_probs=95.8
Q ss_pred ceEeecCccchhhHHHHHHHHHHcCCCCeEEecccc----------ccc----------cCCchhhhhcCCCEEeccCCC
Q 043097 3 DVILVNSKFTATTFANTFKKLHARGIHPVVLYPAVN----------VYQ----------FDKPHSSMAAYKPVIACDSGG 62 (134)
Q Consensus 3 ~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~g~~----------~~~----------~~~~~eAma~G~pvi~s~~~~ 62 (134)
.+++++.+. ....+.+.+.+.+++ ....++.|.. .|. ...++|||+||+|||+|+.++
T Consensus 323 ~l~ivG~g~-~~~~~~l~~~~~~~~-~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg 400 (485)
T 2qzs_A 323 QLALLGAGD-PVLQEGFLAAAAEYP-GQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGG 400 (485)
T ss_dssp EEEEEEEEC-HHHHHHHHHHHHHST-TTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHH
T ss_pred EEEEEeCCc-hHHHHHHHHHHHhCC-CcEEEeCCCCHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCCC
Confidence 466776542 123455666666654 2333466652 111 224668999999999999999
Q ss_pred cccceeeC---------ceEEEecC-CHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 043097 63 PVETIKNE---------VVGFLCNP-TPQEFSLSMAKLI---QEPQMAKKMGENARHHVMESFSTKIFGQHLNRLLAYVA 129 (134)
Q Consensus 63 ~~e~i~~~---------~~g~~~~~-~~~~l~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 129 (134)
..|++.++ .+|+++++ |+++++++|.+++ .|+..+.+|++++++ ++|||+.+++++.++|+++.
T Consensus 401 ~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~~~ 477 (485)
T 2qzs_A 401 LADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRELYYRLK 477 (485)
T ss_dssp HHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHC
T ss_pred ccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHHHHHHhh
Confidence 99999887 78999998 9999999999999 799999999999874 78999999999999999986
Q ss_pred cC
Q 043097 130 RG 131 (134)
Q Consensus 130 ~~ 131 (134)
.+
T Consensus 478 ~~ 479 (485)
T 2qzs_A 478 LE 479 (485)
T ss_dssp --
T ss_pred hh
Confidence 54
No 11
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.73 E-value=8.7e-18 Score=118.55 Aligned_cols=87 Identities=15% Similarity=0.185 Sum_probs=82.2
Q ss_pred CchhhhhcCCCEEeccCCCcccceeeCceEEEecC-CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043097 44 KPHSSMAAYKPVIACDSGGPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLN 122 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 122 (134)
.+.|||++|+|||+++.++..+++.++.+|+++++ |+++++++|.+++.++..+.++++++++.+. .|+|+.+++++.
T Consensus 299 ~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~ 377 (406)
T 2gek_A 299 VLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVH-RYDWSVVSAQIM 377 (406)
T ss_dssp HHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG-GGBHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHH
Confidence 67889999999999999999999998889999987 9999999999999999999999999999997 999999999999
Q ss_pred HHHHHHhcC
Q 043097 123 RLLAYVARG 131 (134)
Q Consensus 123 ~~~~~~~~~ 131 (134)
++|++++.+
T Consensus 378 ~~~~~~~~~ 386 (406)
T 2gek_A 378 RVYETVSGA 386 (406)
T ss_dssp HHHHHHCCT
T ss_pred HHHHHHHhh
Confidence 999998764
No 12
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.73 E-value=9.4e-18 Score=117.22 Aligned_cols=122 Identities=13% Similarity=0.105 Sum_probs=100.8
Q ss_pred ceEeecCccchhhHHHHHHHHHHcCCCCeEEecccc---------ccccC----------CchhhhhcCCCEEeccCCCc
Q 043097 3 DVILVNSKFTATTFANTFKKLHARGIHPVVLYPAVN---------VYQFD----------KPHSSMAAYKPVIACDSGGP 63 (134)
Q Consensus 3 ~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~g~~---------~~~~~----------~~~eAma~G~pvi~s~~~~~ 63 (134)
.+++++.+.. .++.+.+.++++.+.|.|.|.. .+.+. .+.|||+||+|||+|+.++.
T Consensus 230 ~l~i~G~g~~----~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~ 305 (374)
T 2iw1_A 230 LLFVVGQDKP----RKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGY 305 (374)
T ss_dssp EEEEESSSCC----HHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTT
T ss_pred EEEEEcCCCH----HHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCCc
Confidence 4677776432 4567777778888888888862 12222 46689999999999999999
Q ss_pred ccceeeCceEEEec-C-CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 043097 64 VETIKNEVVGFLCN-P-TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLNRLLAYVA 129 (134)
Q Consensus 64 ~e~i~~~~~g~~~~-~-~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 129 (134)
.+++.++.+|++++ + |+++++++|.+++++++.+.++++++++.+. .|+|+...+++.++++..+
T Consensus 306 ~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 306 AHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYAD-TQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp THHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-HSCCSCHHHHHHHHHHCC-
T ss_pred hhhhccCCceEEeCCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHhh
Confidence 99999988999997 6 9999999999999999999999999999885 7899999999999987654
No 13
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.72 E-value=6e-18 Score=124.31 Aligned_cols=97 Identities=18% Similarity=0.193 Sum_probs=77.4
Q ss_pred CeEEeccccccccCCchhhhhcCCCEEeccCCCcccceeeCceEE----------EecC-CHHHHHHHHHHHhc--CHHH
Q 043097 30 PVVLYPAVNVYQFDKPHSSMAAYKPVIACDSGGPVETIKNEVVGF----------LCNP-TPQEFSLSMAKLIQ--EPQM 96 (134)
Q Consensus 30 ~~v~~~g~~~~~~~~~~eAma~G~pvi~s~~~~~~e~i~~~~~g~----------~~~~-~~~~l~~~i~~~~~--~~~~ 96 (134)
+.+++|+..+....+.+|||+||+|||+|++||++|++.++.+|+ ++++ |+++++++|.+++. +.+.
T Consensus 403 D~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~ 482 (536)
T 3vue_A 403 DVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPA 482 (536)
T ss_dssp SEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHH
T ss_pred heeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHH
Confidence 444555544444446778999999999999999999999999998 4555 79999999998775 4445
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 043097 97 AKKMGENARHHVMESFSTKIFGQHLNRLLAYVA 129 (134)
Q Consensus 97 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 129 (134)
+.+|++++ +.+.|||++.+++|.++|+++.
T Consensus 483 ~~~~~~~a---m~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 483 YEEMVRNC---MNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHHHHHHH---HHSCCSSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Confidence 66676665 4578999999999999999874
No 14
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.70 E-value=5.1e-17 Score=112.68 Aligned_cols=81 Identities=17% Similarity=0.260 Sum_probs=73.2
Q ss_pred CchhhhhcCCCEEeccCCCcccceee--CceEEEecCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 043097 44 KPHSSMAAYKPVIACDSGGPVETIKN--EVVGFLCNPTPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHL 121 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~~~e~i~~--~~~g~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 121 (134)
.+.|||+||+|||+|+.++..|++.+ +.+|+++++|+++++++|.+++. ++++++.+.++|+|+.+++++
T Consensus 257 ~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~d~~~l~~~i~~l~~--------~~~~~~~~~~~~s~~~~~~~~ 328 (342)
T 2iuy_A 257 VVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDFAPDEARRTLAGLPA--------SDEVRRAAVRLWGHVTIAERY 328 (342)
T ss_dssp HHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCCCHHHHHHHHHTSCC--------HHHHHHHHHHHHBHHHHHHHH
T ss_pred HHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCCCHHHHHHHHHHHHH--------HHHHHHHHHHhcCHHHHHHHH
Confidence 56789999999999999999999988 78899887699999999999986 567888888899999999999
Q ss_pred HHHHHHHhcCC
Q 043097 122 NRLLAYVARGK 132 (134)
Q Consensus 122 ~~~~~~~~~~~ 132 (134)
.++|+++++++
T Consensus 329 ~~~~~~~~~~~ 339 (342)
T 2iuy_A 329 VEQYRRLLAGA 339 (342)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHccC
Confidence 99999998764
No 15
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.68 E-value=5.1e-16 Score=114.20 Aligned_cols=120 Identities=16% Similarity=0.157 Sum_probs=99.7
Q ss_pred cceEeecCccchhhHHHHHHHHHHcCCC-CeEEecccc-----------ccccC---------CchhhhhcCCCEEe---
Q 043097 2 ADVILVNSKFTATTFANTFKKLHARGIH-PVVLYPAVN-----------VYQFD---------KPHSSMAAYKPVIA--- 57 (134)
Q Consensus 2 a~~v~~~s~~~~~~~~~~~~~~~~~~~~-~~v~~~g~~-----------~~~~~---------~~~eAma~G~pvi~--- 57 (134)
+.+++++. .+...+++.+.+.++|+. +.|.|.|.. .|.|. ..+|||+||+|||+
T Consensus 407 ~~l~i~G~--~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g 484 (568)
T 2vsy_A 407 SVLWLLSG--PGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDALWTGCPVLTTPG 484 (568)
T ss_dssp CEEEEECC--STTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCC
T ss_pred cEEEEecC--CHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccC
Confidence 35677773 234456788889999998 899999862 23333 35689999999999
Q ss_pred ----ccCC-------CcccceeeCceEEEecCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH--HHhcCHHHHHHHHHHH
Q 043097 58 ----CDSG-------GPVETIKNEVVGFLCNPTPQEFSLSMAKLIQEPQMAKKMGENARHHV--MESFSTKIFGQHLNRL 124 (134)
Q Consensus 58 ----s~~~-------~~~e~i~~~~~g~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~~~~~~~~ 124 (134)
|+.+ |.+|++.+ |++++++++..++.|+..+..|++++++.+ .+.|+|+.+++++.++
T Consensus 485 ~~~~s~~~~~~l~~~g~~e~v~~---------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 555 (568)
T 2vsy_A 485 ETFAARVAGSLNHHLGLDEMNVA---------DDAAFVAKAVALASDPAALTALHARVDVLRRASGVFHMDGFADDFGAL 555 (568)
T ss_dssp SSGGGSHHHHHHHHHTCGGGBCS---------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHCCChhhhcC---------CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHH
Confidence 9999 99988744 799999999999999999999999999988 5789999999999999
Q ss_pred HHHHhcCC
Q 043097 125 LAYVARGK 132 (134)
Q Consensus 125 ~~~~~~~~ 132 (134)
|++++.+.
T Consensus 556 y~~~~~~~ 563 (568)
T 2vsy_A 556 LQALARRH 563 (568)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 99988654
No 16
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.64 E-value=1.1e-15 Score=96.01 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=59.3
Q ss_pred CchhhhhcCC-CEEe-ccCCCcccceeeCceEEEecC-CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 043097 44 KPHSSMAAYK-PVIA-CDSGGPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQH 120 (134)
Q Consensus 44 ~~~eAma~G~-pvi~-s~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 120 (134)
.+.|||++|+ |||+ ++.++..+++.++.+ ++++ |+++++++|.+++.++..+..+++++++++ ++|+|++++++
T Consensus 90 ~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~ 166 (166)
T 3qhp_A 90 ACLEAISVGIVPVIANSPLSATRQFALDERS--LFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSA-LNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HHHC-------
T ss_pred HHHHHHhcCCCcEEeeCCCCchhhhccCCce--EEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HHCChhhhhcC
Confidence 5778999998 9999 568889999877654 5555 999999999999999999999999999988 79999988753
No 17
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.60 E-value=9.2e-16 Score=114.14 Aligned_cols=101 Identities=11% Similarity=0.076 Sum_probs=74.6
Q ss_pred CeEEeccccccccCCchhhhhcCCCEEeccCCCcccceeeC-------ceEEEec---C-CHHHHHHHHH----HHhc-C
Q 043097 30 PVVLYPAVNVYQFDKPHSSMAAYKPVIACDSGGPVETIKNE-------VVGFLCN---P-TPQEFSLSMA----KLIQ-E 93 (134)
Q Consensus 30 ~~v~~~g~~~~~~~~~~eAma~G~pvi~s~~~~~~e~i~~~-------~~g~~~~---~-~~~~l~~~i~----~~~~-~ 93 (134)
+.+++|+..+.....++|||+||+|||+|+.+|+.+++.++ .+|+++. + ++++++++|. .++. +
T Consensus 520 dvfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d 599 (725)
T 3nb0_A 520 HLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKT 599 (725)
T ss_dssp SEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCC
T ss_pred eEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCC
Confidence 33444444444444677899999999999999999988764 3688773 2 4555554444 4443 7
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcC
Q 043097 94 PQMAKKMGENARHHVMESFSTKIFGQHLNRLLAYVARG 131 (134)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 131 (134)
+..+..|++++++.+ +.|+|++++++|.++|+.++.+
T Consensus 600 ~~~r~~mr~~ar~~A-~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 600 RRQRINQRNATEALS-DLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp HHHHHHHHHHHHHGG-GGGBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHhh
Confidence 788899999888766 6899999999999999988753
No 18
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.59 E-value=3.7e-15 Score=96.17 Aligned_cols=68 Identities=25% Similarity=0.341 Sum_probs=63.4
Q ss_pred CchhhhhcCCCEEeccCCCcccceeeCceEEEecC-CHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcC
Q 043097 44 KPHSSMAAYKPVIACDSGGPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ-EPQMAKKMGENARHHVMESFS 113 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s 113 (134)
.++|||++|+|||+++.++..+++ ++.+|++++. |+++++++|.+++. ++..+.+|++++++++.+ ||
T Consensus 131 ~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~-fs 200 (200)
T 2bfw_A 131 VALEAMCLGAIPIASAVGGLRDII-TNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS-FS 200 (200)
T ss_dssp HHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred HHHHHHHCCCCEEEeCCCChHHHc-CCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-cC
Confidence 467899999999999999999999 8889999988 99999999999999 999999999999999876 75
No 19
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.58 E-value=1.3e-16 Score=113.94 Aligned_cols=95 Identities=5% Similarity=-0.098 Sum_probs=68.7
Q ss_pred CeEEeccccccccCCchhhhhcCCCEEeccCCCcccceeeCceEEEecC-CHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043097 30 PVVLYPAVNVYQFDKPHSSMAAYKPVIACDSGGPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQEPQMAKKMGENARHHV 108 (134)
Q Consensus 30 ~~v~~~g~~~~~~~~~~eAma~G~pvi~s~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 108 (134)
+..++|+..+.....++||||||+|||+++ +|..|++.++.+|+++++ |+++++++|.++++|+..+.+ ++++.+
T Consensus 316 dv~v~pS~~E~~g~~~lEAmA~G~PVV~~~-~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~~~~~---~~~~~~ 391 (413)
T 2x0d_A 316 SIGISLMISPHPSYPPLEMAHFGLRVITNK-YENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRDV---DKKESS 391 (413)
T ss_dssp CEEECCCSSSSCCSHHHHHHHTTCEEEEEC-BTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC----------CCB
T ss_pred CEEEEecCCCCCCcHHHHHHhCCCcEEEeC-CCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHHHHHH---hHHHHH
Confidence 555666655444456789999999999964 567899988889999988 999999999999998877665 455555
Q ss_pred HHhcCHHHHHHHHHHHHHHHhc
Q 043097 109 MESFSTKIFGQHLNRLLAYVAR 130 (134)
Q Consensus 109 ~~~~s~~~~~~~~~~~~~~~~~ 130 (134)
+.|+|+...++ .++|+++..
T Consensus 392 -~~~~W~~~~~~-~~~~~~l~~ 411 (413)
T 2x0d_A 392 -NMMFYINEFNE-FSFIKEIEE 411 (413)
T ss_dssp -SCGGGCCCC----TTHHHHHT
T ss_pred -HhCCHHHHHHH-HHHHHHHHh
Confidence 58999999888 777777654
No 20
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.56 E-value=3.7e-15 Score=103.97 Aligned_cols=110 Identities=11% Similarity=-0.026 Sum_probs=86.3
Q ss_pred HHHHHHHHHcCCCCeEEecccc---------ccccC------CchhhhhcCCCEEeccCCCcc--------cceeeCceE
Q 043097 17 ANTFKKLHARGIHPVVLYPAVN---------VYQFD------KPHSSMAAYKPVIACDSGGPV--------ETIKNEVVG 73 (134)
Q Consensus 17 ~~~~~~~~~~~~~~~v~~~g~~---------~~~~~------~~~eAma~G~pvi~s~~~~~~--------e~i~~~~~g 73 (134)
+++.+.+.++++. .|.|.|.. .+.+. .+.|||++|+|+|+++.++.+ +++.++ .|
T Consensus 225 ~~l~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g 302 (364)
T 1f0k_A 225 QSVEQAYAEAGQP-QHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AA 302 (364)
T ss_dssp HHHHHHHHHTTCT-TSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SE
T ss_pred HHHHHHHhhcCCC-ceEEecchhhHHHHHHhCCEEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cE
Confidence 5577777777764 47777752 23333 357999999999999998764 455555 49
Q ss_pred EEecC-C--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcC
Q 043097 74 FLCNP-T--PQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLNRLLAYVARG 131 (134)
Q Consensus 74 ~~~~~-~--~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 131 (134)
+++++ | +++++++|.++ |++.+.+|++++++.+ +.|+|+++++++.++|++..++
T Consensus 303 ~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~y~~~~~~ 360 (364)
T 1f0k_A 303 KIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAAS-IPDATERVANEVSRVARALEHH 360 (364)
T ss_dssp EECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTC-CTTHHHHHHHHHHHHHTTC---
T ss_pred EEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhh-ccCHHHHHHHHHHHHHHHHHhh
Confidence 99987 6 99999999998 9999999999999877 5899999999999999876543
No 21
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.51 E-value=4.2e-15 Score=104.36 Aligned_cols=86 Identities=10% Similarity=0.056 Sum_probs=74.5
Q ss_pred CchhhhhcCCCEEeccC-CCcccceeeCceEEEecCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043097 44 KPHSSMAAYKPVIACDS-GGPVETIKNEVVGFLCNPTPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLN 122 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~-~~~~e~i~~~~~g~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 122 (134)
.++|||++|+|||+++. ++..+++.++ +|+++++|+++++++|.+++.|++.+.+|+++++++. +.|+|+++++.+.
T Consensus 293 ~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~d~~~la~~i~~ll~d~~~~~~~~~~~~~~~-~~~~~~~i~~~~~ 370 (384)
T 1vgv_A 293 IQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGTDKQRIVEEVTRLLKDENEYQAMSRAHNPYG-DGQACSRILEALK 370 (384)
T ss_dssp GGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEECSSHHHHHHHHHHHHHCHHHHHHHHSSCCTTC-CSCHHHHHHHHHH
T ss_pred hHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEeCCCHHHHHHHHHHHHhChHHHhhhhhccCCCc-CCCHHHHHHHHHH
Confidence 46799999999999987 8889998877 8999977999999999999999999999999988765 6899999999999
Q ss_pred HHHHHHhcC
Q 043097 123 RLLAYVARG 131 (134)
Q Consensus 123 ~~~~~~~~~ 131 (134)
++|.+..++
T Consensus 371 ~~~~~~~~~ 379 (384)
T 1vgv_A 371 NNRISLGSH 379 (384)
T ss_dssp HTCCCC---
T ss_pred HHHHhhccc
Confidence 988776543
No 22
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.51 E-value=2.4e-13 Score=98.81 Aligned_cols=81 Identities=9% Similarity=0.129 Sum_probs=71.6
Q ss_pred CchhhhhcCC-----CEEeccCCCcccceeeCceEEEecC-CHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHH
Q 043097 44 KPHSSMAAYK-----PVIACDSGGPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ-EPQMAKKMGENARHHVMESFSTKI 116 (134)
Q Consensus 44 ~~~eAma~G~-----pvi~s~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~ 116 (134)
.+.|||+||+ |+|+|+.+|..+.+. +|+++++ |+++++++|.++++ ++..+..+++++++.+. .|||+.
T Consensus 367 v~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~-~~s~~~ 442 (482)
T 1uqt_A 367 VAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIV-KNDINH 442 (482)
T ss_dssp HHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH-HTCHHH
T ss_pred hHHHHHHhCCCCCCCCEEEECCCCCHHHhC---CeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-hCCHHH
Confidence 5778999997 899999887777772 5899988 99999999999998 56788999999999884 699999
Q ss_pred HHHHHHHHHHHH
Q 043097 117 FGQHLNRLLAYV 128 (134)
Q Consensus 117 ~~~~~~~~~~~~ 128 (134)
+++++.+.|+.+
T Consensus 443 ~a~~~l~~l~~~ 454 (482)
T 1uqt_A 443 WQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 999999999876
No 23
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.46 E-value=4.7e-14 Score=89.78 Aligned_cols=90 Identities=24% Similarity=0.232 Sum_probs=66.6
Q ss_pred ceEeecCccchhhHHHHHHHHH--HcCCCCeEEeccc---------------------cccccCCchhhhhcCCCEEecc
Q 043097 3 DVILVNSKFTATTFANTFKKLH--ARGIHPVVLYPAV---------------------NVYQFDKPHSSMAAYKPVIACD 59 (134)
Q Consensus 3 ~~v~~~s~~~~~~~~~~~~~~~--~~~~~~~v~~~g~---------------------~~~~~~~~~eAma~G~pvi~s~ 59 (134)
.+++++....... +.+.+. .+++.+.|.|.|. .......+.|||++|+|||+++
T Consensus 52 ~l~i~G~~~~~~~---l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~ 128 (177)
T 2f9f_A 52 KLYIVGWFSKGDH---AERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVN 128 (177)
T ss_dssp CEEEEBCCCTTST---HHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEES
T ss_pred EEEEEecCccHHH---HHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeC
Confidence 4666665444333 444444 4456666777665 1111225778999999999999
Q ss_pred CCCcccceeeCceEEEecC-CHHHHHHHHHHHhcCHHH
Q 043097 60 SGGPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQEPQM 96 (134)
Q Consensus 60 ~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~~~~ 96 (134)
.++..+++.++.+|+++ . |+++++++|.+++.++..
T Consensus 129 ~~~~~e~i~~~~~g~~~-~~d~~~l~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 129 EGGFKETVINEKTGYLV-NADVNEIIDAMKKVSKNPDK 165 (177)
T ss_dssp SHHHHHHCCBTTTEEEE-CSCHHHHHHHHHHHHHCTTT
T ss_pred CCCHHHHhcCCCccEEe-CCCHHHHHHHHHHHHhCHHH
Confidence 99999999988899998 5 999999999999998864
No 24
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.44 E-value=1e-14 Score=101.98 Aligned_cols=80 Identities=10% Similarity=0.069 Sum_probs=70.8
Q ss_pred chhhhhcCCCEEeccC-CCcccceeeCceEEEecCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 043097 45 PHSSMAAYKPVIACDS-GGPVETIKNEVVGFLCNPTPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLNR 123 (134)
Q Consensus 45 ~~eAma~G~pvi~s~~-~~~~e~i~~~~~g~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 123 (134)
++|||++|+|||+++. ++.++++.++ +|++++.|+++++++|.++++|++.+.+|+++++++. +.|+|+++.+.+.+
T Consensus 294 ~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 294 QEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGTDEETIFSLADELLSDKEAHDKMSKASNPYG-DGRASERIVEAILK 371 (375)
T ss_dssp HHHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCSCHHHHHHHHHHHHHCHHHHHHHCCCCCTTC-CSCHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEecCCCCCceeecCC-ceEEcCCCHHHHHHHHHHHHhChHhHhhhhhcCCCCC-CCcHHHHHHHHHHH
Confidence 5689999999999964 8899998877 8999966999999999999999999999999988766 58999999998887
Q ss_pred HHH
Q 043097 124 LLA 126 (134)
Q Consensus 124 ~~~ 126 (134)
+++
T Consensus 372 ~~~ 374 (375)
T 3beo_A 372 HFN 374 (375)
T ss_dssp HTT
T ss_pred Hhh
Confidence 653
No 25
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.33 E-value=1.4e-12 Score=91.94 Aligned_cols=109 Identities=15% Similarity=-0.019 Sum_probs=78.9
Q ss_pred ceEeecCccchhhHHHHHHHHHHcCCC--------CeEEeccc---------cc----------cc-cCCchhhhhcCCC
Q 043097 3 DVILVNSKFTATTFANTFKKLHARGIH--------PVVLYPAV---------NV----------YQ-FDKPHSSMAAYKP 54 (134)
Q Consensus 3 ~~v~~~s~~~~~~~~~~~~~~~~~~~~--------~~v~~~g~---------~~----------~~-~~~~~eAma~G~p 54 (134)
.+++++.+. ...+++.+.+.++++. ..+.+.|. .. +. ...++|||+||+|
T Consensus 227 ~lvivG~g~--~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~P 304 (374)
T 2xci_A 227 KLILVPRHI--ENAKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIP 304 (374)
T ss_dssp EEEEEESSG--GGHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCC
T ss_pred EEEEECCCH--HHHHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCC
Confidence 467777432 2234577777777776 34565552 11 11 2367899999999
Q ss_pred EEec-cCCCcccceeeC-ceEEEecC-CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCH
Q 043097 55 VIAC-DSGGPVETIKNE-VVGFLCNP-TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFST 114 (134)
Q Consensus 55 vi~s-~~~~~~e~i~~~-~~g~~~~~-~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~ 114 (134)
||++ +.++.+|++.+. .+|.++.. |+++|+++|.++++| +.+.+|++++++++.++++.
T Consensus 305 VI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ga 366 (374)
T 2xci_A 305 VIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV-KKEIKVEEKSREIKGCYLEK 366 (374)
T ss_dssp EEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHHHH
T ss_pred EEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcccH
Confidence 9975 778888877542 35666666 999999999999999 99999999999998765544
No 26
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.20 E-value=2.8e-12 Score=91.30 Aligned_cols=85 Identities=6% Similarity=-0.020 Sum_probs=66.6
Q ss_pred CCeEEeccccccccCCchhhh-------hcCCCEEeccCCCcccceeeCceEEE-ecC-CHHHHHHHHHHHhcCHHHHHH
Q 043097 29 HPVVLYPAVNVYQFDKPHSSM-------AAYKPVIACDSGGPVETIKNEVVGFL-CNP-TPQEFSLSMAKLIQEPQMAKK 99 (134)
Q Consensus 29 ~~~v~~~g~~~~~~~~~~eAm-------a~G~pvi~s~~~~~~e~i~~~~~g~~-~~~-~~~~l~~~i~~~~~~~~~~~~ 99 (134)
.+.+++|+..+......+||| +||+|||+|+. +.++.+|++ +++ |+++|+++|.+++.++.
T Consensus 285 adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d~~~la~ai~~ll~~~~---- 354 (406)
T 2hy7_A 285 ARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGNADSVIAAITQALEAPR---- 354 (406)
T ss_dssp CSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTCHHHHHHHHHHHHHCCC----
T ss_pred cCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEeCCCCHHHHHHHHHHHHhCcc----
Confidence 355555555544445678899 99999999988 556677998 888 99999999999998875
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHH--HHHHh
Q 043097 100 MGENARHHVMESFSTKIFGQHLNRL--LAYVA 129 (134)
Q Consensus 100 ~~~~~~~~~~~~~s~~~~~~~~~~~--~~~~~ 129 (134)
+ ...++|+|+.+++++.++ |+.+.
T Consensus 355 -----~-~~~~~~sw~~~a~~~~~~~~y~~~~ 380 (406)
T 2hy7_A 355 -----V-RYRQCLNWSDTTDRVLDPRAYPETR 380 (406)
T ss_dssp -----C-CCSCCCBHHHHHHHHHCGGGSGGGB
T ss_pred -----h-hhhhcCCHHHHHHHHHHhhcccccC
Confidence 1 134689999999999999 87653
No 27
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.13 E-value=2.5e-10 Score=83.01 Aligned_cols=83 Identities=14% Similarity=0.119 Sum_probs=71.5
Q ss_pred CchhhhhcC---CCEEeccCCCcccceeeCceEEEecC-CHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhcCHHHHH
Q 043097 44 KPHSSMAAY---KPVIACDSGGPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQE-PQMAKKMGENARHHVMESFSTKIFG 118 (134)
Q Consensus 44 ~~~eAma~G---~pvi~s~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~ 118 (134)
.+.|||+|| .|+|+|..+|..+.+. .+|+++++ |+++++++|.++++. ++++..+.++.++++ +.+++...+
T Consensus 387 v~~EamA~~~~~g~lVlSe~aGa~~~l~--~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V-~~~d~~~W~ 463 (496)
T 3t5t_A 387 STFEAPLVNERDADVILSETCGAAEVLG--EYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAA-RPWTLEAWV 463 (496)
T ss_dssp HHHHHHHHCSSCCEEEEETTBTTHHHHG--GGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-TTCBHHHHH
T ss_pred hHHHHHHhCCCCCCEEEeCCCCCHHHhC--CCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HHCCHHHHH
Confidence 567899997 8999999998888873 35899999 999999999999984 578888899999988 689999999
Q ss_pred HHHHHHHHHHh
Q 043097 119 QHLNRLLAYVA 129 (134)
Q Consensus 119 ~~~~~~~~~~~ 129 (134)
+.+.+.+....
T Consensus 464 ~~fl~~L~~~~ 474 (496)
T 3t5t_A 464 QAQLDGLAADH 474 (496)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhhcc
Confidence 99988887653
No 28
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.05 E-value=2e-10 Score=80.17 Aligned_cols=73 Identities=21% Similarity=0.238 Sum_probs=63.0
Q ss_pred chhhhhcCCCEEeccCCCcccceeeCceEEEecCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 043097 45 PHSSMAAYKPVIACDSGGPVETIKNEVVGFLCNPTPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHL 121 (134)
Q Consensus 45 ~~eAma~G~pvi~s~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 121 (134)
++||||+|+|||+++.++..+++.++.+|++++ +.+++++.+..+ +++.+.+|++++++.. +.++++.+.++.
T Consensus 257 l~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~~-~~~e~~~~i~~l--~~~~~~~m~~na~~~a-~~~~~~~f~k~~ 329 (339)
T 3rhz_A 257 LGSFLAAGIPVIVQEGIANQELIENNGLGWIVK-DVEEAIMKVKNV--NEDEYIELVKNVRSFN-PILRKGFFTRRL 329 (339)
T ss_dssp HHHHHHHTCCEEEETTCTTTHHHHHHTCEEEES-SHHHHHHHHHHC--CHHHHHHHHHHHHHHT-HHHHTTHHHHHH
T ss_pred HHHHHHcCCCEEEccChhHHHHHHhCCeEEEeC-CHHHHHHHHHHh--CHHHHHHHHHHHHHHH-HHhhccHHHHHH
Confidence 567999999999999999999999999999998 788999999876 4678999999999876 567777777655
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.01 E-value=2.7e-10 Score=79.77 Aligned_cols=80 Identities=16% Similarity=0.207 Sum_probs=64.7
Q ss_pred chhhhhcCCCEEec-cCCCcccceeeCceEEEecCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 043097 45 PHSSMAAYKPVIAC-DSGGPVETIKNEVVGFLCNPTPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLNR 123 (134)
Q Consensus 45 ~~eAma~G~pvi~s-~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 123 (134)
.+|||++|+|+|++ +.++..+++.++ +|++++.|++++++++.+++.|++.+.+|++++ +.|++....+++.+
T Consensus 286 ~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~~d~~~la~~i~~ll~d~~~~~~~~~~~-----~~~~~~~~~~~i~~ 359 (376)
T 1v4v_A 286 QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAGTDPEGVYRVVKGLLENPEELSRMRKAK-----NPYGDGKAGLMVAR 359 (376)
T ss_dssp HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECCSCHHHHHHHHHHHHTCHHHHHHHHHSC-----CSSCCSCHHHHHHH
T ss_pred HHHHHHcCCCEEeccCCCcchhhhcCC-ceEECCCCHHHHHHHHHHHHhChHhhhhhcccC-----CCCCCChHHHHHHH
Confidence 55899999999987 567888877655 688885599999999999999999999988643 45677777777777
Q ss_pred HHHHHhc
Q 043097 124 LLAYVAR 130 (134)
Q Consensus 124 ~~~~~~~ 130 (134)
.+.+++.
T Consensus 360 ~i~~~~~ 366 (376)
T 1v4v_A 360 GVAWRLG 366 (376)
T ss_dssp HHHHHTT
T ss_pred HHHHHhc
Confidence 7777654
No 30
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=98.89 E-value=2.7e-09 Score=75.44 Aligned_cols=83 Identities=13% Similarity=0.096 Sum_probs=69.3
Q ss_pred CchhhhhcCCCEEeccCCC----cccceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHH
Q 043097 44 KPHSSMAAYKPVIACDSGG----PVETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKI 116 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~----~~e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 116 (134)
+..|||++|+|+|+.+.++ ..+.+.+...|++++. |++++++++.+++.|+..+..|++.+++.. +.++++.
T Consensus 320 t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~-~~~~~~~ 398 (412)
T 3otg_A 320 TTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGARAVAAEIA-AMPGPDE 398 (412)
T ss_dssp HHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HSCCHHH
T ss_pred HHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-cCCCHHH
Confidence 4668999999999976654 4566666778888875 789999999999999999999999888866 6789999
Q ss_pred HHHHHHHHHHH
Q 043097 117 FGQHLNRLLAY 127 (134)
Q Consensus 117 ~~~~~~~~~~~ 127 (134)
+++.+.+++..
T Consensus 399 ~~~~~~~l~~~ 409 (412)
T 3otg_A 399 VVRLLPGFASR 409 (412)
T ss_dssp HHTTHHHHHC-
T ss_pred HHHHHHHHhcc
Confidence 99998888753
No 31
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=98.65 E-value=2e-08 Score=71.47 Aligned_cols=84 Identities=13% Similarity=0.152 Sum_probs=67.0
Q ss_pred CchhhhhcCCCEEeccCCC----cccceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHH
Q 043097 44 KPHSSMAAYKPVIACDSGG----PVETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKI 116 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~----~~e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 116 (134)
+..|||++|+|+|+++.++ +.+.+.+...|+.++. +++++++++.+++.|+..+..+++.+++.. +.++++.
T Consensus 311 t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~ 389 (430)
T 2iyf_A 311 GSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAEMA-QEGGTRR 389 (430)
T ss_dssp HHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HHCHHHH
T ss_pred HHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hcCcHHH
Confidence 4668999999999998754 3344555667888764 689999999999999999999998888765 5689999
Q ss_pred HHHHHHHHHHHH
Q 043097 117 FGQHLNRLLAYV 128 (134)
Q Consensus 117 ~~~~~~~~~~~~ 128 (134)
+++.+.+++++.
T Consensus 390 ~~~~i~~~~~~~ 401 (430)
T 2iyf_A 390 AADLIEAELPAR 401 (430)
T ss_dssp HHHHHHTTSCC-
T ss_pred HHHHHHHHhhcc
Confidence 888888776543
No 32
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.58 E-value=7.8e-08 Score=68.28 Aligned_cols=76 Identities=16% Similarity=0.227 Sum_probs=59.2
Q ss_pred CchhhhhcCCCEEec-cCCCcccceeeCceEEEecCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043097 44 KPHSSMAAYKPVIAC-DSGGPVETIKNEVVGFLCNPTPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLN 122 (134)
Q Consensus 44 ~~~eAma~G~pvi~s-~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 122 (134)
...||+++|+|+|++ +.++.++++..+ .+++++.|++++++++..++.|+..+.+|++++. .|......+++.
T Consensus 318 ~~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv~~d~~~l~~ai~~ll~d~~~~~~m~~~~~-----~~~~~~aa~ri~ 391 (396)
T 3dzc_A 318 IQEEAPSLGKPVLVMRETTERPEAVAAG-TVKLVGTNQQQICDALSLLLTDPQAYQAMSQAHN-----PYGDGKACQRIA 391 (396)
T ss_dssp GGTTGGGGTCCEEECCSSCSCHHHHHHT-SEEECTTCHHHHHHHHHHHHHCHHHHHHHHTSCC-----TTCCSCHHHHHH
T ss_pred HHHHHHHcCCCEEEccCCCcchHHHHcC-ceEEcCCCHHHHHHHHHHHHcCHHHHHHHhhccC-----CCcCChHHHHHH
Confidence 346999999999998 677778888777 4677766899999999999999999999887643 455555555555
Q ss_pred HHH
Q 043097 123 RLL 125 (134)
Q Consensus 123 ~~~ 125 (134)
+++
T Consensus 392 ~~l 394 (396)
T 3dzc_A 392 DIL 394 (396)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.54 E-value=3.7e-08 Score=70.14 Aligned_cols=79 Identities=13% Similarity=0.122 Sum_probs=60.4
Q ss_pred chhhhhcCCCEEec-cCCCcccceeeCceEEEecCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 043097 45 PHSSMAAYKPVIAC-DSGGPVETIKNEVVGFLCNPTPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLNR 123 (134)
Q Consensus 45 ~~eAma~G~pvi~s-~~~~~~e~i~~~~~g~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 123 (134)
..||+++|+|+|++ +.++.++.+..+ +|++++.|++++++++..++.++..+.+|++++. .|......+++.+
T Consensus 313 ~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv~~d~~~l~~ai~~ll~~~~~~~~m~~~~~-----~~g~~~aa~rI~~ 386 (403)
T 3ot5_A 313 QEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGTNKENLIKEALDLLDNKESHDKMAQAAN-----PYGDGFAANRILA 386 (403)
T ss_dssp HHHGGGTTCCEEECCSSCSCHHHHHHT-SEEECCSCHHHHHHHHHHHHHCHHHHHHHHHSCC-----TTCCSCHHHHHHH
T ss_pred HHHHHHhCCCEEEecCCCcchhheeCC-cEEEcCCCHHHHHHHHHHHHcCHHHHHHHHhhcC-----cccCCcHHHHHHH
Confidence 46899999999998 677777887666 6888876999999999999999999988876543 3444455555555
Q ss_pred HHHHHh
Q 043097 124 LLAYVA 129 (134)
Q Consensus 124 ~~~~~~ 129 (134)
.+.+.+
T Consensus 387 ~l~~~l 392 (403)
T 3ot5_A 387 AIKSHF 392 (403)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555544
No 34
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=98.46 E-value=5.5e-08 Score=68.61 Aligned_cols=78 Identities=5% Similarity=-0.020 Sum_probs=60.5
Q ss_pred CchhhhhcCCCEEeccC----CCcccceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHH
Q 043097 44 KPHSSMAAYKPVIACDS----GGPVETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKI 116 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~----~~~~e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 116 (134)
+..|||++|+|+|+.+. .++.+.+.+...|+.++. +++++++++.+++.|+..+..+++.+++.. ...+++.
T Consensus 312 t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~-~~~~~~~ 390 (398)
T 4fzr_A 312 TTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSSYVGNARRLAAEMA-TLPTPAD 390 (398)
T ss_dssp HHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCTHHHHHHHHHHHHHT-TSCCHHH
T ss_pred HHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-cCCCHHH
Confidence 47789999999999544 355566767778988865 588999999999999999999988888755 6789998
Q ss_pred HHHHHH
Q 043097 117 FGQHLN 122 (134)
Q Consensus 117 ~~~~~~ 122 (134)
+.+.+.
T Consensus 391 ~~~~l~ 396 (398)
T 4fzr_A 391 IVRLIE 396 (398)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 887664
No 35
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=98.46 E-value=1.6e-07 Score=65.99 Aligned_cols=82 Identities=10% Similarity=0.040 Sum_probs=63.6
Q ss_pred CchhhhhcCCCEEeccC----CCcccceeeCceEEEecC-----CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCH
Q 043097 44 KPHSSMAAYKPVIACDS----GGPVETIKNEVVGFLCNP-----TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFST 114 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~----~~~~e~i~~~~~g~~~~~-----~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~ 114 (134)
+..|||++|+|+|+.+. .++.+.+.+...|..++. +++.+++++.+++.|+..+..+++.+++.. ...++
T Consensus 298 t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~-~~~~~ 376 (391)
T 3tsa_A 298 TAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEIT-AMPHP 376 (391)
T ss_dssp HHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHH-TSCCH
T ss_pred HHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-cCCCH
Confidence 45689999999999644 334455666677888764 699999999999999999999988877755 67899
Q ss_pred HHHHHHHHHHHH
Q 043097 115 KIFGQHLNRLLA 126 (134)
Q Consensus 115 ~~~~~~~~~~~~ 126 (134)
+..++.+.++..
T Consensus 377 ~~~~~~i~~~~~ 388 (391)
T 3tsa_A 377 AALVRTLENTAA 388 (391)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHHHHh
Confidence 888877766543
No 36
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.41 E-value=6.1e-08 Score=72.08 Aligned_cols=108 Identities=8% Similarity=-0.045 Sum_probs=71.1
Q ss_pred HHHHHHHcCCCCeEEeccc-----------cccccC---------CchhhhhcCCCEEeccCCCccccee------eCce
Q 043097 19 TFKKLHARGIHPVVLYPAV-----------NVYQFD---------KPHSSMAAYKPVIACDSGGPVETIK------NEVV 72 (134)
Q Consensus 19 ~~~~~~~~~~~~~v~~~g~-----------~~~~~~---------~~~eAma~G~pvi~s~~~~~~e~i~------~~~~ 72 (134)
..+...+.|+.+++.|.|. ..|.|. ...|||++|+|||+........-+. -|-.
T Consensus 488 ~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLp 567 (631)
T 3q3e_A 488 YVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLP 567 (631)
T ss_dssp HHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCC
Confidence 3444455677778888885 122222 4667999999999965544443321 1222
Q ss_pred EE-EecCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHh
Q 043097 73 GF-LCNPTPQEFSLSMAKLIQEPQMAKKMGENARHHVME--SFSTKIFGQHLNRLLAYVA 129 (134)
Q Consensus 73 g~-~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~~~ 129 (134)
++ +.. +.+++.+...++.+|++.+.+++++.++.... -|+ ...+++.+.|+.++
T Consensus 568 E~LIA~-d~eeYv~~Av~La~D~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~ 624 (631)
T 3q3e_A 568 EWLIAN-TVDEYVERAVRLAENHQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKL 624 (631)
T ss_dssp GGGEES-SHHHHHHHHHHHHHCHHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHH
T ss_pred cceecC-CHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHH
Confidence 32 444 89999999999999999999999998876533 344 44455555555543
No 37
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.37 E-value=3.1e-07 Score=64.46 Aligned_cols=83 Identities=14% Similarity=0.137 Sum_probs=57.4
Q ss_pred CchhhhhcCCCEEeccCCCcc--------cceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhc
Q 043097 44 KPHSSMAAYKPVIACDSGGPV--------ETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESF 112 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~~~--------e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (134)
+..|+|++|+|+|..+.+... +.+.+...|++++. +++.|++++.+++.||+.+.+|++++++.. +..
T Consensus 264 Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~-~~~ 342 (365)
T 3s2u_A 264 TVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLA-KPE 342 (365)
T ss_dssp HHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTC-CTT
T ss_pred hHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcC-Ccc
Confidence 356899999999987765321 23444456777764 589999999999999999999999998755 344
Q ss_pred CHHHHHHHHHHHHHH
Q 043097 113 STKIFGQHLNRLLAY 127 (134)
Q Consensus 113 s~~~~~~~~~~~~~~ 127 (134)
..+++++.++++.+.
T Consensus 343 aa~~ia~~i~~larG 357 (365)
T 3s2u_A 343 ATRTVVDACLEVARG 357 (365)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHcc
Confidence 555555555555443
No 38
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=98.30 E-value=8.9e-07 Score=62.17 Aligned_cols=83 Identities=13% Similarity=0.182 Sum_probs=65.4
Q ss_pred CchhhhhcCCCEEeccC-----CCcccceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHH
Q 043097 44 KPHSSMAAYKPVIACDS-----GGPVETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTK 115 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~-----~~~~e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 115 (134)
+..|||++|+|+|+... .+..+.+.+...|..+.. +++.+++++.+++.|+..+..+++.+++.. ...+++
T Consensus 309 t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~-~~~~~~ 387 (402)
T 3ia7_A 309 AVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAVRERVRRMQRDIL-SSGGPA 387 (402)
T ss_dssp HHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-TSCHHH
T ss_pred HHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHh-hCChHH
Confidence 35679999999996544 344455666677888765 689999999999999999998888776654 578888
Q ss_pred HHHHHHHHHHHH
Q 043097 116 IFGQHLNRLLAY 127 (134)
Q Consensus 116 ~~~~~~~~~~~~ 127 (134)
..++.+.+++..
T Consensus 388 ~~~~~i~~~~~~ 399 (402)
T 3ia7_A 388 RAADEVEAYLGR 399 (402)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 888888887764
No 39
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=98.23 E-value=3.3e-06 Score=59.20 Aligned_cols=82 Identities=13% Similarity=0.141 Sum_probs=61.8
Q ss_pred CchhhhhcCCCEEeccCCC----cccceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHH
Q 043097 44 KPHSSMAAYKPVIACDSGG----PVETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKI 116 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~----~~e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 116 (134)
+..|||++|+|+|+.+..+ +.+.+.+...|+.++. +++++++++.+++.|+..+..+++.+.+.. ..-..+.
T Consensus 291 t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~ 369 (384)
T 2p6p_A 291 STLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDTYARRAQDLSREIS-GMPLPAT 369 (384)
T ss_dssp HHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-TSCCHHH
T ss_pred HHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hCCCHHH
Confidence 5778999999999997743 4444555567888764 689999999999999998888887776644 4556666
Q ss_pred HHHHHHHHHH
Q 043097 117 FGQHLNRLLA 126 (134)
Q Consensus 117 ~~~~~~~~~~ 126 (134)
.+..+.++..
T Consensus 370 ~~~~i~~~~~ 379 (384)
T 2p6p_A 370 VVTALEQLAH 379 (384)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 6666655543
No 40
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=98.21 E-value=2.1e-06 Score=60.76 Aligned_cols=83 Identities=7% Similarity=0.071 Sum_probs=63.3
Q ss_pred CchhhhhcCCCEEeccC----CCcccceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHH
Q 043097 44 KPHSSMAAYKPVIACDS----GGPVETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKI 116 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~----~~~~e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 116 (134)
+..|||++|+|+|+... ....+.+.+...|..+.. +++++++++.+++.|+..+..+++.+.+.. ...+++.
T Consensus 325 t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~ 403 (415)
T 3rsc_A 325 TLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEAMRGHVR-RAGGAAR 403 (415)
T ss_dssp HHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-HSCHHHH
T ss_pred HHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hcCHHHH
Confidence 35679999999999544 234445555567877764 689999999999999999998887776644 6788888
Q ss_pred HHHHHHHHHHH
Q 043097 117 FGQHLNRLLAY 127 (134)
Q Consensus 117 ~~~~~~~~~~~ 127 (134)
.++.+.+++..
T Consensus 404 ~~~~i~~~~~~ 414 (415)
T 3rsc_A 404 AADAVEAYLAR 414 (415)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhc
Confidence 88887777653
No 41
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=98.14 E-value=5.4e-06 Score=58.43 Aligned_cols=77 Identities=12% Similarity=0.121 Sum_probs=60.1
Q ss_pred CchhhhhcCCCEEe----ccCCCcc--cceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCH
Q 043097 44 KPHSSMAAYKPVIA----CDSGGPV--ETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFST 114 (134)
Q Consensus 44 ~~~eAma~G~pvi~----s~~~~~~--e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~ 114 (134)
+..|||++|+|+|+ .+..++. +.+.+...|+.++. +++.++ ++++|+..++.+++.+++.. ...++
T Consensus 311 t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~-~~~~~ 385 (398)
T 3oti_A 311 TVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGDESLRTAAREVREEMV-ALPTP 385 (398)
T ss_dssp HHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHCHHHHHHHHHHHHHHH-TSCCH
T ss_pred HHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcCHHHHHHHHHHHHHHH-hCCCH
Confidence 46679999999999 4556667 77777778988864 355555 78889999999988887755 68899
Q ss_pred HHHHHHHHHHH
Q 043097 115 KIFGQHLNRLL 125 (134)
Q Consensus 115 ~~~~~~~~~~~ 125 (134)
+.+++.+.++.
T Consensus 386 ~~~~~~l~~l~ 396 (398)
T 3oti_A 386 AETVRRIVERI 396 (398)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 98888877664
No 42
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.12 E-value=5.1e-06 Score=59.45 Aligned_cols=82 Identities=13% Similarity=0.103 Sum_probs=64.0
Q ss_pred CchhhhhcCCCEEeccCCC----cccceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHH
Q 043097 44 KPHSSMAAYKPVIACDSGG----PVETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKI 116 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~----~~e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 116 (134)
+..|||++|+|+|+.+..+ +.+.+.+...|+.++. +++.++++|.+++.|+..+..+++.+++.. ...+.+.
T Consensus 347 t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~ 425 (441)
T 2yjn_A 347 SWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAARMRDDML-AEPSPAE 425 (441)
T ss_dssp HHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-TSCCHHH
T ss_pred HHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-cCCCHHH
Confidence 4668999999999997743 3344555567888764 689999999999999999988888776644 5788888
Q ss_pred HHHHHHHHHH
Q 043097 117 FGQHLNRLLA 126 (134)
Q Consensus 117 ~~~~~~~~~~ 126 (134)
+++.+.+++.
T Consensus 426 ~~~~i~~~~~ 435 (441)
T 2yjn_A 426 VVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8877776654
No 43
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=97.92 E-value=8.5e-06 Score=50.90 Aligned_cols=56 Identities=7% Similarity=0.124 Sum_probs=43.2
Q ss_pred CchhhhhcCCCEEeccCCC----cccceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHH
Q 043097 44 KPHSSMAAYKPVIACDSGG----PVETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKK 99 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~----~~e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~ 99 (134)
+..|||++|+|+|+.+..+ ..+.+.+...|+.++. ++++++++|.+++.++..+..
T Consensus 98 t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 160 (170)
T 2o6l_A 98 GIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDPSYKEN 160 (170)
T ss_dssp HHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCHHHHHH
Confidence 4667999999999998752 3345556667888764 689999999999999865444
No 44
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=97.72 E-value=8.2e-05 Score=52.81 Aligned_cols=82 Identities=15% Similarity=0.185 Sum_probs=58.3
Q ss_pred CchhhhhcCCCEEeccCCC----cccceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHH
Q 043097 44 KPHSSMAAYKPVIACDSGG----PVETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKI 116 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~----~~e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 116 (134)
+..||+++|+|+|+.+..+ +.+.+.+...|+.++. +++++++++.+++.|+..+..+++.+.+.. .....+.
T Consensus 333 t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~ 411 (424)
T 2iya_A 333 STMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAAVRQEIR-EAGGARA 411 (424)
T ss_dssp HHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-TSCHHHH
T ss_pred HHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hcCcHHH
Confidence 4667999999999987642 2234445556877753 789999999999999988887776665533 4556666
Q ss_pred HHHHHHHHHH
Q 043097 117 FGQHLNRLLA 126 (134)
Q Consensus 117 ~~~~~~~~~~ 126 (134)
.++.+.+++.
T Consensus 412 ~~~~i~~~~~ 421 (424)
T 2iya_A 412 AADILEGILA 421 (424)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6666655543
No 45
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=97.59 E-value=6.3e-06 Score=58.37 Aligned_cols=80 Identities=6% Similarity=0.006 Sum_probs=53.8
Q ss_pred chhhhhcCCCEEeccCCC-cccceeeCceEEEecCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 043097 45 PHSSMAAYKPVIACDSGG-PVETIKNEVVGFLCNPTPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLNR 123 (134)
Q Consensus 45 ~~eAma~G~pvi~s~~~~-~~e~i~~~~~g~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 123 (134)
..||+++|+|+|+.+... .+|.+..+ ++++++.|++++.+++..+++|+..+..|++++..+.-...+-+++.+.+.+
T Consensus 294 ~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~~d~~~i~~ai~~ll~d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~ 372 (385)
T 4hwg_A 294 TEEASILNLPALNIREAHERPEGMDAG-TLIMSGFKAERVLQAVKTITEEHDNNKRTQGLVPDYNEAGLVSKKILRIVLS 372 (385)
T ss_dssp HHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECCSSHHHHHHHHHHHHTTCBTTBCCSCCCHHHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcCCCHHHHHHHHHHHHhChHHHHHhhccCCCCCCCChHHHHHHHHHHH
Confidence 568999999999986543 56777666 5677766899999999999998876666654433220122344455555544
Q ss_pred HH
Q 043097 124 LL 125 (134)
Q Consensus 124 ~~ 125 (134)
.+
T Consensus 373 ~~ 374 (385)
T 4hwg_A 373 YV 374 (385)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 46
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=97.58 E-value=0.00019 Score=50.91 Aligned_cols=80 Identities=19% Similarity=0.103 Sum_probs=54.0
Q ss_pred CchhhhhcCCCEEeccCCC----cccceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHH
Q 043097 44 KPHSSMAAYKPVIACDSGG----PVETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKI 116 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~----~~e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 116 (134)
+..|||++|+|+|+.+..+ +.+.+.+...|+.++. +++++++++.++ .|+..++.+.+.+.+ +....
T Consensus 313 t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~-----~~~~~ 386 (415)
T 1iir_A 313 TTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LTPETHARATAVAGT-----IRTDG 386 (415)
T ss_dssp HHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHHHHHHHHH-----SCSCH
T ss_pred HHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHHHHHHHHH-----HhhcC
Confidence 4667999999999987654 3344555557887753 689999999999 998777666554433 33344
Q ss_pred HHHHHHHHHHHHh
Q 043097 117 FGQHLNRLLAYVA 129 (134)
Q Consensus 117 ~~~~~~~~~~~~~ 129 (134)
-.++..+.++.++
T Consensus 387 ~~~~~~~~i~~~~ 399 (415)
T 1iir_A 387 AAVAARLLLDAVS 399 (415)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 4445555555544
No 47
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.38 E-value=0.0015 Score=49.95 Aligned_cols=115 Identities=15% Similarity=0.146 Sum_probs=79.5
Q ss_pred HHHHHHHHHHcCCC-CeEEeccc-----------c----ccccC-----CchhhhhcCCCEEeccCCCccc-----ceee
Q 043097 16 FANTFKKLHARGIH-PVVLYPAV-----------N----VYQFD-----KPHSSMAAYKPVIACDSGGPVE-----TIKN 69 (134)
Q Consensus 16 ~~~~~~~~~~~~~~-~~v~~~g~-----------~----~~~~~-----~~~eAma~G~pvi~s~~~~~~e-----~i~~ 69 (134)
...+.+.....|+. ++++|.+. . .|.|+ ...||+.+|+|||+-.-..+.. ++..
T Consensus 565 ~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~ 644 (723)
T 4gyw_A 565 EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC 644 (723)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH
Confidence 34566777777764 56777664 1 12222 4678999999999954222211 1111
Q ss_pred -CceEEEecCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHhcC
Q 043097 70 -EVVGFLCNPTPQEFSLSMAKLIQEPQMAKKMGENARHHVME--SFSTKIFGQHLNRLLAYVARG 131 (134)
Q Consensus 70 -~~~g~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~~~~~ 131 (134)
|-..+++. |.+++.+...++..|++.+..++++.++.... -|+-..+++.+++.|+.++.+
T Consensus 645 ~gl~e~ia~-~~~~Y~~~a~~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 645 LGCLELIAK-NRQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HTCGGGBCS-SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccC-CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 11113333 89999999999999999999999988877654 499999999999999988754
No 48
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=97.25 E-value=0.00014 Score=51.03 Aligned_cols=78 Identities=12% Similarity=0.063 Sum_probs=49.8
Q ss_pred CchhhhhcCCCEEeccCCC----cccceeeCceEEEecCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 043097 44 KPHSSMAAYKPVIACDSGG----PVETIKNEVVGFLCNPTPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQ 119 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~----~~e~i~~~~~g~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 119 (134)
+..|||++|+|+|+.+..+ +.+.+.+...|+..+ +.+..+++|.+++.|+..++..++-+.+ +...-+....++
T Consensus 316 s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~-~~~~~~~al~~lL~d~~~r~~a~~l~~~-~~~~~~~~~~a~ 393 (400)
T 4amg_A 316 TLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAE-AGSLGAEQCRRLLDDAGLREAALRVRQE-MSEMPPPAETAA 393 (400)
T ss_dssp HHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECC-TTTCSHHHHHHHHHCHHHHHHHHHHHHH-HHTSCCHHHHHH
T ss_pred HHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcC-CCCchHHHHHHHHcCHHHHHHHHHHHHH-HHcCCCHHHHHH
Confidence 4668999999999976543 223344445677766 3445677889999999877765554443 334446666655
Q ss_pred HHHH
Q 043097 120 HLNR 123 (134)
Q Consensus 120 ~~~~ 123 (134)
.+++
T Consensus 394 ~le~ 397 (400)
T 4amg_A 394 XLVA 397 (400)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 49
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=97.03 E-value=0.00018 Score=51.01 Aligned_cols=61 Identities=13% Similarity=0.131 Sum_probs=44.5
Q ss_pred CchhhhhcCCCEEeccCCC----cccceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043097 44 KPHSSMAAYKPVIACDSGG----PVETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENAR 105 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~----~~e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~ 105 (134)
+..||+++|+|+|+.+..+ +.+.+.+...|+..+. +++++++++.++ .|+..++.+++.++
T Consensus 314 t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~ 381 (416)
T 1rrv_A 314 TEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAPETRARAEAVAG 381 (416)
T ss_dssp HHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHHHHHHHH
Confidence 4567999999999976643 2234444556777653 689999999999 99887777665443
No 50
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=96.82 E-value=0.0012 Score=46.72 Aligned_cols=80 Identities=14% Similarity=0.132 Sum_probs=52.1
Q ss_pred CchhhhhcCCCEEeccCCCcc----cceeeCceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHH
Q 043097 44 KPHSSMAAYKPVIACDSGGPV----ETIKNEVVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKI 116 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~~~----e~i~~~~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 116 (134)
+..||+++|+|+|+.+..+-. +.+.+...|...+. +++.+.+++.+++. +..+..+.+.+.... . -..+.
T Consensus 296 t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~-~-~~~~~ 372 (404)
T 3h4t_A 296 TTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT-PGIRARAAAVAGTIR-T-DGTTV 372 (404)
T ss_dssp HHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTCC-C-CHHHH
T ss_pred HHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHh-h-hHHHH
Confidence 355799999999998665432 22444456777653 68999999999998 777666655443322 2 35555
Q ss_pred HHHHHHHHHH
Q 043097 117 FGQHLNRLLA 126 (134)
Q Consensus 117 ~~~~~~~~~~ 126 (134)
.++.+.+++.
T Consensus 373 ~~~~i~~~~~ 382 (404)
T 3h4t_A 373 AAKLLLEAIS 382 (404)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5555555443
No 51
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=96.44 E-value=0.0042 Score=44.85 Aligned_cols=64 Identities=19% Similarity=0.210 Sum_probs=44.9
Q ss_pred CchhhhhcCCCEEeccCCCcc----cceeeC-ceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043097 44 KPHSSMAAYKPVIACDSGGPV----ETIKNE-VVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHHV 108 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~~~----e~i~~~-~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 108 (134)
+..||+++|+|+|+-+..+-. ..+.+. ..|+..+. +.+++.+++++++.+++ ...|++++++..
T Consensus 355 S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~ 426 (456)
T 2c1x_A 355 SLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEK-GKKLRENLRALR 426 (456)
T ss_dssp HHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHH-HHHHHHHHHHHH
T ss_pred hHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCCc-HHHHHHHHHHHH
Confidence 466899999999997654222 233344 56777653 68999999999999875 455666666543
No 52
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=95.50 E-value=0.054 Score=39.28 Aligned_cols=64 Identities=17% Similarity=0.169 Sum_probs=45.4
Q ss_pred CchhhhhcCCCEEeccCCCccc----ce-eeCceEEEecC--CHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043097 44 KPHSSMAAYKPVIACDSGGPVE----TI-KNEVVGFLCNP--TPQEFSLSMAKLIQEPQMAKKMGENARHHV 108 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~~~e----~i-~~~~~g~~~~~--~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 108 (134)
+..||+++|+|+|+-+..+-.. .+ .....|+.... +.+++.+++++++.++. .+.|++++++..
T Consensus 383 s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~ 453 (482)
T 2pq6_A 383 STTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAGDK-GKKMKQKAMELK 453 (482)
T ss_dssp HHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTSHH-HHHHHHHHHHHH
T ss_pred hHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcCCc-HHHHHHHHHHHH
Confidence 4678999999999986643221 23 23446776653 79999999999999886 356666666543
No 53
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=94.31 E-value=0.033 Score=40.30 Aligned_cols=63 Identities=10% Similarity=0.040 Sum_probs=42.6
Q ss_pred CchhhhhcCCCEEeccCCCc----ccceeeC-ceEEEecC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043097 44 KPHSSMAAYKPVIACDSGGP----VETIKNE-VVGFLCNP---TPQEFSLSMAKLIQEPQMAKKMGENARHH 107 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~~----~e~i~~~-~~g~~~~~---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 107 (134)
+..||+++|+|.|+-+..+- ...+.+. ..|+.++. +.+++.+++++++.++ ..+.|++++++.
T Consensus 357 S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~-~~~~~r~~a~~l 427 (454)
T 3hbf_A 357 SVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSE-KGGIMRQKIVKL 427 (454)
T ss_dssp HHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSH-HHHHHHHHHHHH
T ss_pred hHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCC-hHHHHHHHHHHH
Confidence 46679999999999765321 1233342 56776653 6899999999999874 234555555543
No 54
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=91.76 E-value=0.2 Score=36.38 Aligned_cols=50 Identities=12% Similarity=0.061 Sum_probs=34.6
Q ss_pred CchhhhhcCCCEEeccCCCc----ccce-eeCceEEEec-----C-CHHHHHHHHHHHhcC
Q 043097 44 KPHSSMAAYKPVIACDSGGP----VETI-KNEVVGFLCN-----P-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~~----~e~i-~~~~~g~~~~-----~-~~~~l~~~i~~~~~~ 93 (134)
+..||+++|+|+|+-+..+= ...+ .....|+... . +.+++++++++++.+
T Consensus 369 S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~ 429 (480)
T 2vch_A 369 STLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEG 429 (480)
T ss_dssp HHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTS
T ss_pred hHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcC
Confidence 46679999999999765421 1122 3444565543 2 689999999999983
No 55
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=89.20 E-value=0.38 Score=37.24 Aligned_cols=78 Identities=13% Similarity=0.109 Sum_probs=52.1
Q ss_pred hhhcCCCEEeccCCCcccceee--CceEEEecCCHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHhcCHHHHH
Q 043097 48 SMAAYKPVIACDSGGPVETIKN--EVVGFLCNPTPQEFSLSMAK-------LIQEPQMAKKMGENARHHVMESFSTKIFG 118 (134)
Q Consensus 48 Ama~G~pvi~s~~~~~~e~i~~--~~~g~~~~~~~~~l~~~i~~-------~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 118 (134)
+|..|++.|++--|...|+.+. ..+|+++..+++++.+.-.. ...++ ...++.+++ ....|||...
T Consensus 646 am~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~---~~g~fs~~~~- 720 (796)
T 1l5w_A 646 LALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDK-VLDAVLKEL---ESGKYSDGDK- 720 (796)
T ss_dssp HHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHH---HHTTTTTTCT-
T ss_pred HHHcCCeeecCcCCeeeehhhccCCCcEEEecCCHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHH---HcCCCCCCcH-
Confidence 8999999999977877776533 46899998777776542222 22244 333333333 3467999875
Q ss_pred HHHHHHHHHHhc
Q 043097 119 QHLNRLLAYVAR 130 (134)
Q Consensus 119 ~~~~~~~~~~~~ 130 (134)
..+..+|.+++.
T Consensus 721 ~~y~~Ly~~L~~ 732 (796)
T 1l5w_A 721 HAFDQMLHSIGK 732 (796)
T ss_dssp TTTHHHHHHTST
T ss_pred HHHHHHHHHHhc
Confidence 778999988764
No 56
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=88.74 E-value=1.3 Score=31.85 Aligned_cols=49 Identities=16% Similarity=0.066 Sum_probs=35.7
Q ss_pred CchhhhhcCCCEEeccCCCcc----cc-eeeCceEEEe-c-------C-CHHHHHHHHHHHhc
Q 043097 44 KPHSSMAAYKPVIACDSGGPV----ET-IKNEVVGFLC-N-------P-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 44 ~~~eAma~G~pvi~s~~~~~~----e~-i~~~~~g~~~-~-------~-~~~~l~~~i~~~~~ 92 (134)
+..||+++|+|+|+-+..+-. .. +.....|+.+ . . +.+++.++++++++
T Consensus 362 s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~ 424 (463)
T 2acv_A 362 SILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMD 424 (463)
T ss_dssp HHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTC
T ss_pred hHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHh
Confidence 567899999999997653222 23 3455567777 1 3 78999999999996
No 57
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=87.80 E-value=0.49 Score=36.81 Aligned_cols=78 Identities=14% Similarity=0.086 Sum_probs=49.9
Q ss_pred hhhcCCCEEeccCCCccccee--eCceEEEecCCHHHHHHHHH-------HHhcCHHHHHHHHHHHHHHHHHhcCHHHHH
Q 043097 48 SMAAYKPVIACDSGGPVETIK--NEVVGFLCNPTPQEFSLSMA-------KLIQEPQMAKKMGENARHHVMESFSTKIFG 118 (134)
Q Consensus 48 Ama~G~pvi~s~~~~~~e~i~--~~~~g~~~~~~~~~l~~~i~-------~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 118 (134)
+|..|++.|++--|...|+.+ +..+|+++...++++ ..+. .+........++-++. +...|+|..-
T Consensus 670 amlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~~~ev-~~l~~~~~~a~~~Y~~~~~l~~v~d~i---~~g~fs~~~~- 744 (824)
T 2gj4_A 670 FMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDV-DRLDQRGYNAQEYYDRIPELRQIIEQL---SSGFFSPKQP- 744 (824)
T ss_dssp HHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHH-HHHHHHCCCHHHHHHHCHHHHHHHHHH---HHTTTCTTST-
T ss_pred HHHcCceEEEEecCccchhhhccCCCCEEEeCCcHHHH-HHHHHcCCCHHHHhcCCHHHHHHHHHH---HhCCCCCCCh-
Confidence 899999999997777767653 456789988766666 3332 1222222233333332 3467999876
Q ss_pred HHHHHHHHHHhc
Q 043097 119 QHLNRLLAYVAR 130 (134)
Q Consensus 119 ~~~~~~~~~~~~ 130 (134)
..|..+|.+++.
T Consensus 745 ~~y~~ly~~l~~ 756 (824)
T 2gj4_A 745 DLFKDIVNMLMH 756 (824)
T ss_dssp TTTHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 678888888764
No 58
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=81.02 E-value=0.25 Score=38.24 Aligned_cols=78 Identities=12% Similarity=0.034 Sum_probs=48.1
Q ss_pred hhhcCCCEEeccCCCcccceee--CceEEEecCC---HHHHHHH---HHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 043097 48 SMAAYKPVIACDSGGPVETIKN--EVVGFLCNPT---PQEFSLS---MAKLIQEPQMAKKMGENARHHVMESFSTKIFGQ 119 (134)
Q Consensus 48 Ama~G~pvi~s~~~~~~e~i~~--~~~g~~~~~~---~~~l~~~---i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 119 (134)
+|..|++.|++--|...|+.+. ..+|+++..+ +.++... ..-...++ ...++.+++ ....|||... .
T Consensus 636 am~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~~-~~~~vvd~~---~~g~fs~~~~-~ 710 (796)
T 2c4m_A 636 FMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRESYKPYELYETVP-GLKRALDAL---DNGTLNDNNS-G 710 (796)
T ss_dssp HHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHST-THHHHHHTT---TSSSSCCTTC-C
T ss_pred HHHcCCeEEeccCCeEeehhhhcCCCcEEEecCchhhHHHHHHhhChHHHhhcCH-HHHHHHHHH---HcCCCCCCCH-H
Confidence 8999999999977777776533 4689999763 4444332 11111222 222222222 2356888776 6
Q ss_pred HHHHHHHHHhc
Q 043097 120 HLNRLLAYVAR 130 (134)
Q Consensus 120 ~~~~~~~~~~~ 130 (134)
.+..+|.+++.
T Consensus 711 ~y~~Ly~~L~~ 721 (796)
T 2c4m_A 711 LFYDLKHSLIH 721 (796)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHHh
Confidence 78999988864
No 59
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=74.39 E-value=1.4 Score=28.21 Aligned_cols=62 Identities=18% Similarity=0.030 Sum_probs=34.8
Q ss_pred CCCeE-EeccccccccCCchhhhhcCCCEEeccCCCccc-----------ceeeCce-EEEecCCHHHHHHHHHHH
Q 043097 28 IHPVV-LYPAVNVYQFDKPHSSMAAYKPVIACDSGGPVE-----------TIKNEVV-GFLCNPTPQEFSLSMAKL 90 (134)
Q Consensus 28 ~~~~v-~~~g~~~~~~~~~~eAma~G~pvi~s~~~~~~e-----------~i~~~~~-g~~~~~~~~~l~~~i~~~ 90 (134)
+.+.+ +++|. ...+.-..||+..|+||++-+..+..+ ++.+... -+.+..|++++.+.+.++
T Consensus 118 ~sda~IvlpGG-~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~~~~~ee~~~~l~~~ 192 (195)
T 1rcu_A 118 NADVVVSIGGE-IGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQIIEQI 192 (195)
T ss_dssp TCSEEEEESCC-HHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHHHHHHTC
T ss_pred hCCEEEEecCC-CcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEEeCCHHHHHHHHHHH
Confidence 34444 45543 444445667999999999986543332 2211111 233333788888877654
No 60
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=73.78 E-value=5.8 Score=28.01 Aligned_cols=52 Identities=10% Similarity=-0.116 Sum_probs=37.9
Q ss_pred hhhcCCCEEeccCCCcccceeeCceEEEecC--CHHHHHHHHHHHhcCHHHHHHH
Q 043097 48 SMAAYKPVIACDSGGPVETIKNEVVGFLCNP--TPQEFSLSMAKLIQEPQMAKKM 100 (134)
Q Consensus 48 Ama~G~pvi~s~~~~~~e~i~~~~~g~~~~~--~~~~l~~~i~~~~~~~~~~~~~ 100 (134)
|+.+|+-+|+-..+...+++..+. -+-+.. +++++++.|..+-.|+....++
T Consensus 254 al~~g~VPI~~G~~~~~~~~Pp~S-fI~~~dF~s~~~La~yL~~L~~n~~~Y~~y 307 (371)
T 2nzw_A 254 AYFSHTIPIYWGSPSVAKDFNPKS-FVNVHDFKNFDEAIDYIKYLHTHKNAYLDM 307 (371)
T ss_dssp HHHTTCEEEEESCTTGGGTSCGGG-SEEGGGSSSHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHhCCeEEEEECCCchhhhCCCCc-eEEcccCCCHHHHHHHHHHHhcCHHHHHHH
Confidence 999998777766555666665432 233433 7999999999999998776654
No 61
>3oao_A Uncharacterized protein from DUF2059 family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.72A {Pseudomonas aeruginosa} PDB: 2x3o_A
Probab=62.67 E-value=23 Score=21.45 Aligned_cols=35 Identities=9% Similarity=0.048 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 043097 95 QMAKKMGENARHHVMESFSTKIFGQHLNRLLAYVA 129 (134)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 129 (134)
.....+..+....+.+.++|+.+...+..+|.+-.
T Consensus 46 ~~~~~~~~k~~~~~~k~~s~~~l~~~~~~iY~~~f 80 (147)
T 3oao_A 46 AVLERYQAKANAELDRAIGWDKIKPELIKLYTTNF 80 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHC
Confidence 44555666666667777888888888888886543
No 62
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=59.31 E-value=22 Score=20.16 Aligned_cols=42 Identities=12% Similarity=0.090 Sum_probs=29.6
Q ss_pred cCCCEEe-ccCC---CcccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 51 AYKPVIA-CDSG---GPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 51 ~G~pvi~-s~~~---~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..+|+|+ |... ...+.+..+..+++..+ +++++...+..++.
T Consensus 77 ~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~ 123 (140)
T 3h5i_A 77 SELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITIVEMALR 123 (140)
T ss_dssp CCCCEEEEESSSSCCCCGGGGGSCEEEEEETTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 4788876 3322 23344555777899988 99999999988874
No 63
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=56.29 E-value=41 Score=22.54 Aligned_cols=31 Identities=19% Similarity=0.261 Sum_probs=20.9
Q ss_pred CHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHH
Q 043097 79 TPQEFSLSMAKLIQ--EPQMAKKMGENARHHVM 109 (134)
Q Consensus 79 ~~~~l~~~i~~~~~--~~~~~~~~~~~~~~~~~ 109 (134)
+...+++.|...+. ||+....+.+|+.++..
T Consensus 129 ~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~ 161 (286)
T 3gi1_A 129 LAGEEAVNIAKELGRLDPKHKDSYTKNAKAFKK 161 (286)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHChhhHHHHHHHHHHHHH
Confidence 45556666666555 88887878777776654
No 64
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=56.28 E-value=12 Score=23.05 Aligned_cols=19 Identities=5% Similarity=0.191 Sum_probs=14.4
Q ss_pred eEEEecCCHHHHHHHHHHHh
Q 043097 72 VGFLCNPTPQEFSLSMAKLI 91 (134)
Q Consensus 72 ~g~~~~~~~~~l~~~i~~~~ 91 (134)
+|.++. +.+++.+.+...+
T Consensus 143 ~g~~~~-~~~~~~~~l~~~~ 161 (162)
T 3ehd_A 143 NGRVVS-SEEDLLEEIKQRL 161 (162)
T ss_dssp TEEEES-SHHHHHHHHHHTC
T ss_pred CCeEEe-CHHHHHHHHHHHh
Confidence 677776 7888888887654
No 65
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=55.49 E-value=23 Score=19.96 Aligned_cols=43 Identities=14% Similarity=0.250 Sum_probs=29.6
Q ss_pred cCCCEEe-ccCC---CcccceeeCceEEEecC-CHHHHHHHHHHHhcC
Q 043097 51 AYKPVIA-CDSG---GPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 51 ~G~pvi~-s~~~---~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
.++|+|. |... ...+.+..+..+++..+ +++++...+..++..
T Consensus 75 ~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 122 (140)
T 3n53_A 75 KNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDLLSRIEIHLRT 122 (140)
T ss_dssp TTCCEEEEECC----CTTTTTTCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHhcCCCeeeeCCCCHHHHHHHHHHHHhh
Confidence 5678866 3322 23334555677899988 999999999888753
No 66
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=51.04 E-value=3.7 Score=23.91 Aligned_cols=41 Identities=15% Similarity=0.205 Sum_probs=26.0
Q ss_pred cCCCEEe-ccCCCcccceeeCceEEEecC-CHHHHHHHHHHHh
Q 043097 51 AYKPVIA-CDSGGPVETIKNEVVGFLCNP-TPQEFSLSMAKLI 91 (134)
Q Consensus 51 ~G~pvi~-s~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~ 91 (134)
.++|+|. |..+.......-+..+++.+| +++++.+.+.++.
T Consensus 78 ~~ipvI~lTa~~~~~~~~~~g~~~yl~KP~~~~~L~~~l~~~~ 120 (123)
T 2lpm_A 78 RNVPFIFATGYGSKGLDTRYSNIPLLTKPFLDSELEAVLVQIS 120 (123)
T ss_dssp TCCSSCCBCTTCTTSCCSSSCSCSCBCSSSSHHHHHHHHSTTC
T ss_pred CCCCEEEEecCccHHHHHhCCCCcEEECCCCHHHHHHHHHHHH
Confidence 5788765 443322222233455788888 9999998887664
No 67
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=50.92 E-value=26 Score=19.44 Aligned_cols=43 Identities=16% Similarity=0.184 Sum_probs=28.1
Q ss_pred cCCCEEec-cCC--CcccceeeCceEEEecC-CHHHHHHHHHHHhcC
Q 043097 51 AYKPVIAC-DSG--GPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 51 ~G~pvi~s-~~~--~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
.++|+|.- ... ...+.+..+..+++..+ +++++.+.+..++..
T Consensus 76 ~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 76 KHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVKPPVLIAQLHALLAR 122 (133)
T ss_dssp TTCCEEEEESCCC-----TTSCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHhHHHHhhcCCceEEeccCCHHHHHHHHHHHHhh
Confidence 36788663 322 11334455667789888 999999999988753
No 68
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=50.38 E-value=7.1 Score=23.00 Aligned_cols=42 Identities=17% Similarity=0.347 Sum_probs=29.8
Q ss_pred cCCCEEe-ccCCCccc---ceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 51 AYKPVIA-CDSGGPVE---TIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 51 ~G~pvi~-s~~~~~~e---~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..+|||. |..+.... .+.-|..+++.+| +++++.+.+.+++.
T Consensus 86 ~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHh
Confidence 5688875 44443322 3445777899999 99999999988764
No 69
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=49.85 E-value=9.4 Score=22.17 Aligned_cols=46 Identities=13% Similarity=0.252 Sum_probs=30.1
Q ss_pred hhcCCCEEe-ccCCC---cccceeeC-ceEEEecC-CHHHHHHHHHHHhcCH
Q 043097 49 MAAYKPVIA-CDSGG---PVETIKNE-VVGFLCNP-TPQEFSLSMAKLIQEP 94 (134)
Q Consensus 49 ma~G~pvi~-s~~~~---~~e~i~~~-~~g~~~~~-~~~~l~~~i~~~~~~~ 94 (134)
....+|+|. |.... ..+.+..+ ..+++..+ +.+++...+..++...
T Consensus 73 ~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~~~i~~~l~~~ 124 (151)
T 3kcn_A 73 ISPNSVYLMLTGNQDLTTAMEAVNEGQVFRFLNKPCQMSDIKAAINAGIKQY 124 (151)
T ss_dssp HCSSCEEEEEECGGGHHHHHHHHHHTCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEECCCCHHHHHHHHHcCCeeEEEcCCCCHHHHHHHHHHHHHHH
Confidence 345677765 33322 22334445 56888888 9999999999888644
No 70
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=49.72 E-value=21 Score=27.22 Aligned_cols=47 Identities=11% Similarity=0.074 Sum_probs=28.2
Q ss_pred chhhhhcCCCEEecc--C--------CCcccceeeCceEEEecCCHHHHHHHHHHHhcC
Q 043097 45 PHSSMAAYKPVIACD--S--------GGPVETIKNEVVGFLCNPTPQEFSLSMAKLIQE 93 (134)
Q Consensus 45 ~~eAma~G~pvi~s~--~--------~~~~e~i~~~~~g~~~~~~~~~l~~~i~~~~~~ 93 (134)
..|++..++|||... . |..-+ +.+...|.++. +.+++.+.|......
T Consensus 627 ~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d-~~~~~pg~~~~-~~~eL~~~i~~~~~~ 683 (729)
T 3l7i_A 627 MFDYGILKRPQFFFAYDIDKYDKGLRGFYMN-YMEDLPGPIYT-EPYGLAKELKNLDKV 683 (729)
T ss_dssp HHHHGGGCCCEEEECTTTTTTTSSCCSBSSC-TTSSSSSCEES-SHHHHHHHHTTHHHH
T ss_pred HHhHHhhCCCEEEecCCHHHHhhccCCcccC-hhHhCCCCeEC-CHHHHHHHHhhhhcc
Confidence 345999999999862 1 11111 11222344554 789999888877643
No 71
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=49.63 E-value=34 Score=19.42 Aligned_cols=43 Identities=21% Similarity=0.195 Sum_probs=26.2
Q ss_pred hcCCCEEe-ccCC---CcccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 50 AAYKPVIA-CDSG---GPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 50 a~G~pvi~-s~~~---~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..++|+|. |... ...+.+..+..+++..+ +++++.+.+..++.
T Consensus 75 ~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~ 122 (141)
T 3cu5_A 75 YPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDALKQSIQ 122 (141)
T ss_dssp CTTCEEEEECCSTTTCCC------CCCEEECSSCCHHHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCcHHHHHHHHhCCccEEEeCCCCHHHHHHHHHHHHH
Confidence 45678765 3332 23344556777889888 99999999987763
No 72
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=46.40 E-value=21 Score=20.68 Aligned_cols=44 Identities=18% Similarity=0.370 Sum_probs=29.6
Q ss_pred hcCCCEEec-cCCC---cccceeeCceEEEecC-CHHHHHHHHHHHhcC
Q 043097 50 AAYKPVIAC-DSGG---PVETIKNEVVGFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 50 a~G~pvi~s-~~~~---~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
...+|+|+- .... ....+..+..+++..+ +++++...+..++..
T Consensus 73 ~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 73 DPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEK 121 (155)
T ss_dssp CTTSCEEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHhcCCCeEEeCCCCHHHHHHHHHHHHHH
Confidence 347888763 3222 2233445667888888 999999999888753
No 73
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=44.92 E-value=60 Score=20.92 Aligned_cols=14 Identities=21% Similarity=0.233 Sum_probs=11.2
Q ss_pred hhhcCCCEEeccCC
Q 043097 48 SMAAYKPVIACDSG 61 (134)
Q Consensus 48 Ama~G~pvi~s~~~ 61 (134)
+...|.|+|..+..
T Consensus 82 ~~~~~iPvV~~~~~ 95 (291)
T 3l49_A 82 INDAGIPLFTVDTA 95 (291)
T ss_dssp HHHTTCCEEEESCC
T ss_pred HHHCCCcEEEecCC
Confidence 66789999998764
No 74
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=44.67 E-value=18 Score=24.79 Aligned_cols=80 Identities=15% Similarity=0.146 Sum_probs=41.0
Q ss_pred CCCeEEeccccccccC-CchhhhhcCCCEEeccCCCcccc-ee----e--CceEEEecC-CHHHHHHHHHHHhc--CHHH
Q 043097 28 IHPVVLYPAVNVYQFD-KPHSSMAAYKPVIACDSGGPVET-IK----N--EVVGFLCNP-TPQEFSLSMAKLIQ--EPQM 96 (134)
Q Consensus 28 ~~~~v~~~g~~~~~~~-~~~eAma~G~pvi~s~~~~~~e~-i~----~--~~~g~~~~~-~~~~l~~~i~~~~~--~~~~ 96 (134)
-.+.+++.|...+.+. .+.++.. +.++|....+ +..+ .. + .+..++.++ +...+++.|...+. ||..
T Consensus 94 ~ADlvv~nG~~lE~wl~k~~~~~~-~~~~v~~s~g-i~~~~~~~~~~~~~~DPHvWldp~n~~~~a~~I~~~L~~~DP~~ 171 (321)
T 1xvl_A 94 DADLILYNGMNLERWFEQFLGNVK-DVPSVVLTEG-IEPIPIADGPYTDKPNPHAWMSPRNALVYVENIRQAFVELDPDN 171 (321)
T ss_dssp TCSEEEECCTTSSTTHHHHHHTSS-SCCEEETTTT-CCCCBCCSSSSTTSBCCCGGGSHHHHHHHHHHHHHHHHHHCGGG
T ss_pred cCCEEEECCCChHHHHHHHHHhcC-CCcEEEccCC-cccccccccCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHHCccc
Confidence 4477777776544433 2333443 5555543221 1111 00 0 011233333 45666666666665 8888
Q ss_pred HHHHHHHHHHHHH
Q 043097 97 AKKMGENARHHVM 109 (134)
Q Consensus 97 ~~~~~~~~~~~~~ 109 (134)
...+.+|+..+..
T Consensus 172 a~~Y~~Na~~~~~ 184 (321)
T 1xvl_A 172 AKYYNANAAVYSE 184 (321)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888776654
No 75
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=44.18 E-value=32 Score=19.33 Aligned_cols=43 Identities=7% Similarity=0.183 Sum_probs=28.8
Q ss_pred hcCCCEEe-ccCC---CcccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 50 AAYKPVIA-CDSG---GPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 50 a~G~pvi~-s~~~---~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
...+|+|+ |... .....+..+..+++..+ +.+++...+..++.
T Consensus 79 ~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 126 (142)
T 3cg4_A 79 EQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDLIEKTTFFMG 126 (142)
T ss_dssp CTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHHHHHHHHHHHH
Confidence 34677765 3322 23334555667888888 89999999988763
No 76
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=44.06 E-value=36 Score=19.02 Aligned_cols=45 Identities=20% Similarity=0.149 Sum_probs=29.8
Q ss_pred hhcCCCEEec-cCCC---cccceeeCceEEEecC-CHHHHHHHHHHHhcC
Q 043097 49 MAAYKPVIAC-DSGG---PVETIKNEVVGFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 49 ma~G~pvi~s-~~~~---~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
....+|+|+- .... ..+.+..+..+++..+ +++++.+.+.+++..
T Consensus 76 ~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 125 (137)
T 3hdg_A 76 GGAKPYVIVISAFSEMKYFIKAIELGVHLFLPKPIEPGRLMETLEDFRHI 125 (137)
T ss_dssp TTCCCEEEECCCCCCHHHHHHHHHHCCSEECCSSCCHHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEecCcChHHHHHHHhCCcceeEcCCCCHHHHHHHHHHHHHH
Confidence 3456777763 3222 2233455667888888 999999999888743
No 77
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=42.21 E-value=18 Score=24.67 Aligned_cols=94 Identities=7% Similarity=-0.003 Sum_probs=46.4
Q ss_pred CCeEEeccccccccC-CchhhhhcCCC-EEe-ccCCCccccee----eCceEEEecC-CHHHHHHHHHHHhc--CHHHHH
Q 043097 29 HPVVLYPAVNVYQFD-KPHSSMAAYKP-VIA-CDSGGPVETIK----NEVVGFLCNP-TPQEFSLSMAKLIQ--EPQMAK 98 (134)
Q Consensus 29 ~~~v~~~g~~~~~~~-~~~eAma~G~p-vi~-s~~~~~~e~i~----~~~~g~~~~~-~~~~l~~~i~~~~~--~~~~~~ 98 (134)
.+.+++.|...+.+. .+.++.. +.+ +|. ++.-....... ..+..++.++ +...+++.|...+. ||+...
T Consensus 88 ADlvv~~G~~lE~w~~~~~~~~~-~~~~~v~~s~~i~~~~~~~~~~~~~DPHvWldp~n~~~~a~~I~~~L~~~DP~~a~ 166 (313)
T 1toa_A 88 ADLILYNGLHLETKMGEVFSKLR-GSRLVVAVSETIPVSQRLSLEEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTR 166 (313)
T ss_dssp CSEEEECCTTCSTTCHHHHHHHT-TSSEEEEGGGGSCGGGSCBSTTSCBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHH
T ss_pred CCEEEEcCCCcHHHHHHHHHhcc-CCCeEEEeecCcccccccccCCCCCCCceeCCHHHHHHHHHHHHHHHHHHChhhHH
Confidence 477777776555443 3334443 344 333 22111111111 0111233333 45666666666665 888888
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043097 99 KMGENARHHVMESFSTKIFGQHLNRLLA 126 (134)
Q Consensus 99 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 126 (134)
.+.+|+.++..+ ++..-+.+.+.+.
T Consensus 167 ~Y~~N~~~~~~~---L~~Ld~~~~~~l~ 191 (313)
T 1toa_A 167 EFTQRYQAYQQQ---LDKLDAYVRRKAQ 191 (313)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHh
Confidence 888887766542 3444444444443
No 78
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=42.00 E-value=58 Score=19.85 Aligned_cols=30 Identities=7% Similarity=0.197 Sum_probs=23.1
Q ss_pred cceeeCceEEEecC-CHHHHHHHHHHHhcCH
Q 043097 65 ETIKNEVVGFLCNP-TPQEFSLSMAKLIQEP 94 (134)
Q Consensus 65 e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~~ 94 (134)
+.+..+..+++..+ +++.+...+..++...
T Consensus 102 ~~~~~ga~~~l~KP~~~~~L~~~i~~~~~~~ 132 (205)
T 1s8n_A 102 RARDAGAMAYLVKPFSISDLIPAIELAVSRF 132 (205)
T ss_dssp TTGGGSCEEEEEESCCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEeCCCCHHHHHHHHHHHHHHH
Confidence 34556777888888 9999999998887643
No 79
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=41.24 E-value=30 Score=23.14 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=21.1
Q ss_pred CHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHH
Q 043097 79 TPQEFSLSMAKLIQ--EPQMAKKMGENARHHVM 109 (134)
Q Consensus 79 ~~~~l~~~i~~~~~--~~~~~~~~~~~~~~~~~ 109 (134)
+...+++.|...+. ||.....+.+|+..+..
T Consensus 127 ~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~ 159 (284)
T 3cx3_A 127 KAGEEAQIIADKLSEVDSEHKETYQKNAQAFIK 159 (284)
T ss_dssp HHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 45566666666555 88888888888776654
No 80
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=40.72 E-value=46 Score=18.38 Aligned_cols=44 Identities=7% Similarity=-0.003 Sum_probs=29.0
Q ss_pred hcCCCEEe-ccCC---CcccceeeCceEEEecC-CHHHHHHHHHHHhcC
Q 043097 50 AAYKPVIA-CDSG---GPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 50 a~G~pvi~-s~~~---~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
....|+|. |... ...+.+..+..+++..+ +++++.+.+..++..
T Consensus 72 ~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~~ 120 (134)
T 3f6c_A 72 QYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNG 120 (134)
T ss_dssp TCCSEEEEEECC---CTHHHHHHTTCSEEEEGGGCTHHHHHHHHHHHTT
T ss_pred CCCCeEEEEeCCCChHHHHHHHHhCCCEEEeCCCCHHHHHHHHHHHHCC
Confidence 34667765 3322 22333455667888888 899999999888753
No 81
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=40.37 E-value=48 Score=20.07 Aligned_cols=44 Identities=14% Similarity=0.232 Sum_probs=29.4
Q ss_pred cCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHhcCH
Q 043097 51 AYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLIQEP 94 (134)
Q Consensus 51 ~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~~ 94 (134)
..+|+|. |..+.. .+.+..|..+++..+ +++++...+..++...
T Consensus 78 ~~~~ii~lt~~~~~~~~~~a~~~ga~~~l~KP~~~~~L~~~l~~~~~~~ 126 (196)
T 1qo0_D 78 PRTTLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARRIS 126 (196)
T ss_dssp TTCEEEEEECCCSHHHHHHHHHHTCSEEEESSCCGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCChHHHHHHHHcCCCeeEecCcCHHHHHHHHHHHHHHH
Confidence 5677765 443322 223445677899988 8999999998877543
No 82
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=38.72 E-value=55 Score=18.67 Aligned_cols=44 Identities=16% Similarity=0.242 Sum_probs=30.2
Q ss_pred hcCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHhcC
Q 043097 50 AAYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 50 a~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
...+|+|. |..... .+.+..+..+++..+ +.+++.+.+..++..
T Consensus 87 ~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 87 ELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKG 135 (152)
T ss_dssp TCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEEccCCHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHcC
Confidence 45677765 333322 233455677899988 999999999998864
No 83
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=38.19 E-value=54 Score=18.39 Aligned_cols=42 Identities=14% Similarity=0.166 Sum_probs=27.0
Q ss_pred CCCEEe-ccCC-CcccceeeCceEEEecC-CHHHHHHHHHHHhcC
Q 043097 52 YKPVIA-CDSG-GPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 52 G~pvi~-s~~~-~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
..|+|. |... ...+.+..+..+++..+ +.+++...+..++..
T Consensus 83 ~~~ii~~s~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 127 (143)
T 2qv0_A 83 KPFIVFITAWKEHAVEAFELEAFDYILKPYQESRIINMLQKLTTA 127 (143)
T ss_dssp CCEEEEEESCCTTHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHhCCcceEEeCCCCHHHHHHHHHHHHHH
Confidence 445543 3332 22333455667888888 999999999887643
No 84
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=37.73 E-value=22 Score=22.45 Aligned_cols=58 Identities=9% Similarity=-0.090 Sum_probs=35.0
Q ss_pred ceEeecCccchhhHHHHHHHHHHcCCCCeEEecccccccc--------CCchhhhhcCCCEEeccC
Q 043097 3 DVILVNSKFTATTFANTFKKLHARGIHPVVLYPAVNVYQF--------DKPHSSMAAYKPVIACDS 60 (134)
Q Consensus 3 ~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~--------~~~~eAma~G~pvi~s~~ 60 (134)
..+++.|+++......+.+.+..+|-....--.+...... .....|++.|++||..++
T Consensus 11 ~~~~~~sgl~~~~~~~l~~~i~~lgG~~~~~~~~~~~THlv~~~~~rT~K~l~ai~~g~~Iv~~~W 76 (199)
T 3u3z_A 11 TRTLVMTSMPSEKQNVVIQVVDKLKGFSIAPDVCETTTHVLSGKPLRTLNVLLGIARGCWVLSYDW 76 (199)
T ss_dssp CCEEEEESCCHHHHHHHHHHHHHHCSCEEESSCCTTEEEEEESSCCCBHHHHHHHHTTCEEEETHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHHcCCcEEecCCCCCCeEEEECCCCCCHHHHHHHHCCCcEEeHHH
Confidence 3567788888888888888888874211110011111111 124459999999998765
No 85
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=37.71 E-value=42 Score=22.52 Aligned_cols=31 Identities=13% Similarity=0.185 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHH
Q 043097 79 TPQEFSLSMAKLIQ--EPQMAKKMGENARHHVM 109 (134)
Q Consensus 79 ~~~~l~~~i~~~~~--~~~~~~~~~~~~~~~~~ 109 (134)
+...+++.|...+. +|.....+.+|+.++..
T Consensus 140 ~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~ 172 (291)
T 1pq4_A 140 LVKRQATTIAKELAELDPDNRDQYEANLAAFLA 172 (291)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcccHHHHHHHHHHHHH
Confidence 45566666666665 88888888777776654
No 86
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=37.69 E-value=55 Score=18.90 Aligned_cols=45 Identities=11% Similarity=0.155 Sum_probs=29.6
Q ss_pred hhhcCCCEEec-cCCC---cccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 48 SMAAYKPVIAC-DSGG---PVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 48 Ama~G~pvi~s-~~~~---~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
.....+|+|+- .... ..+.+..+..+++..+ +.+++.+.+..++.
T Consensus 107 ~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 107 EFDKNARVIMISALGKEQLVKDCLIKGAKTFIVKPLDRAKVLQRVMSVFV 156 (157)
T ss_dssp HHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHTTC
T ss_pred hhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHhc
Confidence 34456787663 3322 2223455667888888 99999999988764
No 87
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=37.09 E-value=37 Score=22.55 Aligned_cols=44 Identities=14% Similarity=0.150 Sum_probs=30.8
Q ss_pred hhhcCCCEEe-ccCC-CcccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 48 SMAAYKPVIA-CDSG-GPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 48 Ama~G~pvi~-s~~~-~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
... .+|||+ |..+ .....+..|..+++.+| ++++|...|..++.
T Consensus 230 ~~~-~~piI~lT~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~i~~~l~ 276 (286)
T 3n0r_A 230 GRM-DVPVIFITAFPERLLTGERPEPTFLITKPFQPETVKAAIGQALF 276 (286)
T ss_dssp HHT-TCCEEEEESCGGGGCCSSSCCCSSEEESSCCHHHHHHHHHHHHH
T ss_pred hcC-CCCEEEEeCCHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 444 899987 3332 22233455667799999 99999999998875
No 88
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=36.86 E-value=21 Score=22.74 Aligned_cols=58 Identities=14% Similarity=-0.014 Sum_probs=34.2
Q ss_pred cceEeecCccchhhHHHHHHHHHHcCCCCeEEeccccccc------------cCCchhhhhcCCCEEecc
Q 043097 2 ADVILVNSKFTATTFANTFKKLHARGIHPVVLYPAVNVYQ------------FDKPHSSMAAYKPVIACD 59 (134)
Q Consensus 2 a~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~------------~~~~~eAma~G~pvi~s~ 59 (134)
-+++++-|++.......+.+.+..+|..-.--+...-.+. -.....|++.|+|||..+
T Consensus 6 ~~~~i~~sg~~~~~~~~l~~~~~~~G~~~~~~~~~~~THlI~~~~~~~~~~rt~K~~~a~~~g~~IV~~~ 75 (229)
T 1l0b_A 6 RDISMVVSGLTPKEVMIVQKFAEKYRLALTDVITEETTHVIIKTDAEFVCERTLKYFLGIAGGKWIVSYS 75 (229)
T ss_dssp CCCEEEEESCCHHHHHHHHHHHHHTTCEECSSCCSSCCEEEECBCTTSEECCCHHHHHHHHTTCEEEETH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHHcCCEEeCCcCCCCCEEEEcCCccccccccHHHHHHHHCCCcEecHH
Confidence 3577888888887777788888887642110011100000 112335899999998853
No 89
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=35.60 E-value=86 Score=20.01 Aligned_cols=42 Identities=17% Similarity=0.275 Sum_probs=28.4
Q ss_pred cCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 51 AYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 51 ~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..+|+|. |..... .+.+..+..|++..+ +++++...+..++.
T Consensus 107 ~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~Kp~~~~~L~~~i~~~l~ 153 (249)
T 3q9s_A 107 SALPIIVLTARDTVEEKVRLLGLGADDYLIKPFHPDELLARVKVQLR 153 (249)
T ss_dssp CCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHHHh
Confidence 4577765 333222 223445677899988 99999999988765
No 90
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=35.10 E-value=62 Score=18.49 Aligned_cols=45 Identities=16% Similarity=0.260 Sum_probs=29.2
Q ss_pred hhcCCCEEec-cCCCc---ccceeeC-ceEEEecC-CHHHHHHHHHHHhcC
Q 043097 49 MAAYKPVIAC-DSGGP---VETIKNE-VVGFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 49 ma~G~pvi~s-~~~~~---~e~i~~~-~~g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
....+|+|+- ..... .+.+..+ ..+++..+ +++++...+..++..
T Consensus 83 ~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~l~~~i~~~l~~ 133 (153)
T 3hv2_A 83 QYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKPWDDQELLLALRQALEH 133 (153)
T ss_dssp HCTTSEEEEECCCCCHHHHHHHHHTTCCSEEECSSCCHHHHHHHHHHHHHH
T ss_pred HCCCCeEEEEECCCCHHHHHHHHhCCCcceEEeCCCCHHHHHHHHHHHHHH
Confidence 3456787663 33221 2233445 56788888 999999999888753
No 91
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=34.87 E-value=65 Score=20.00 Aligned_cols=43 Identities=16% Similarity=0.264 Sum_probs=29.5
Q ss_pred hcCCCEEe-ccCC---CcccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 50 AAYKPVIA-CDSG---GPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 50 a~G~pvi~-s~~~---~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..++|+|. |... ...+.+..+..+++..+ +++++...+..++.
T Consensus 77 ~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~ 124 (233)
T 1ys7_A 77 DNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLR 124 (233)
T ss_dssp TCCCCEEEEECCCTTTCCCTTTTTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHh
Confidence 45788876 3222 23344556777899988 89999999988754
No 92
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=34.85 E-value=27 Score=22.01 Aligned_cols=58 Identities=5% Similarity=-0.085 Sum_probs=35.1
Q ss_pred ceEeecCccchhhHHHHHHHHHHcCCCCeEEeccc------cccccC---CchhhhhcCCCEEeccC
Q 043097 3 DVILVNSKFTATTFANTFKKLHARGIHPVVLYPAV------NVYQFD---KPHSSMAAYKPVIACDS 60 (134)
Q Consensus 3 ~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~---~~~eAma~G~pvi~s~~ 60 (134)
.++++.|++.......+.+.+..+|-.-.--+... ..+... ..+.|++.|++||..++
T Consensus 2 ~~vi~~sg~~~~~~~~l~~~~~~~G~~~~~~~~~~~THlV~~~~~~~rt~K~l~a~~~g~~IV~~~W 68 (210)
T 2nte_A 2 PLVLIGSGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEW 68 (210)
T ss_dssp CCEEEESSCCHHHHHHHHHHHHHTTCEEESSCCTTCCEEEESSSSCCCSHHHHHHHHTTCEEEETHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHcCCEEeCCCCCCCeEEEEcCCCcchHHHHHHHHhcCCEEecHHH
Confidence 46788899988887888888888775211111100 000011 12359999999988654
No 93
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=34.46 E-value=10 Score=25.41 Aligned_cols=31 Identities=13% Similarity=0.193 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHH
Q 043097 79 TPQEFSLSMAKLIQ--EPQMAKKMGENARHHVM 109 (134)
Q Consensus 79 ~~~~l~~~i~~~~~--~~~~~~~~~~~~~~~~~ 109 (134)
+...+++.|...+. ||.....+.+|+.++..
T Consensus 124 ~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~ 156 (284)
T 2prs_A 124 IARATAVAIHGKLVELMPQSRAKLDANLKDFEA 156 (284)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH
Confidence 45566666666655 88888888888776654
No 94
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=34.34 E-value=54 Score=17.64 Aligned_cols=45 Identities=13% Similarity=0.261 Sum_probs=25.4
Q ss_pred hhhcCCCEEeccCCCccccee--------eCceEEEecC-CHHHHHHHHHHHhc
Q 043097 48 SMAAYKPVIACDSGGPVETIK--------NEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 48 Ama~G~pvi~s~~~~~~e~i~--------~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
.--.|+|.++.-.|+...-++ ++..--+... ||+++-+.++.++.
T Consensus 47 mkdngkplvvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 47 MKDNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp HTTCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred HHhcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 345789998876654432221 1222222333 78888887777653
No 95
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=34.25 E-value=30 Score=23.56 Aligned_cols=31 Identities=16% Similarity=0.134 Sum_probs=21.7
Q ss_pred CHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHH
Q 043097 79 TPQEFSLSMAKLIQ--EPQMAKKMGENARHHVM 109 (134)
Q Consensus 79 ~~~~l~~~i~~~~~--~~~~~~~~~~~~~~~~~ 109 (134)
+...+++.|...+. ||.....+.+|+.++..
T Consensus 138 n~~~~a~~I~~~L~~~DP~~a~~Y~~Na~~~~~ 170 (307)
T 3ujp_A 138 NALVYVENIRQAFVELDPDNAKYYNANAAVYSE 170 (307)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH
Confidence 45666666666665 88888888888776654
No 96
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=33.60 E-value=33 Score=18.65 Aligned_cols=42 Identities=17% Similarity=0.278 Sum_probs=26.4
Q ss_pred cCCCEEec-cCCC---cccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 51 AYKPVIAC-DSGG---PVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 51 ~G~pvi~s-~~~~---~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..+|+|.- .... ....+..+..+++..+ +++++...+..++.
T Consensus 74 ~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 120 (124)
T 1mb3_A 74 AHIPVVAVTAFAMKGDEERIREGGCEAYISKPISVVHFLETIKRLLE 120 (124)
T ss_dssp TTSCEEEEC------CHHHHHHHTCSEEECSSCCHHHHHHHHHHHHS
T ss_pred cCCcEEEEECCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHHHh
Confidence 36787653 3221 2223445667888888 89999999887764
No 97
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=32.93 E-value=31 Score=22.12 Aligned_cols=56 Identities=16% Similarity=0.131 Sum_probs=34.8
Q ss_pred ceEeecCccchhhHHHHHHHHHHcCCCCeEEeccccccccC--------CchhhhhcCCCEEeccC
Q 043097 3 DVILVNSKFTATTFANTFKKLHARGIHPVVLYPAVNVYQFD--------KPHSSMAAYKPVIACDS 60 (134)
Q Consensus 3 ~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~--------~~~eAma~G~pvi~s~~ 60 (134)
..+++-|++.......+.+.+..+|-. +.-...+....+ ....|++.|+|||..++
T Consensus 16 ~~~i~~SG~~~~~~~~l~~~i~~lGg~--v~~~~~~~THLI~~~~~rT~K~l~A~~~g~~IVs~~W 79 (219)
T 3sqd_A 16 TPFVLFTGFEPVQVQQYIKKLYILGGE--VAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEW 79 (219)
T ss_dssp CCEEEECSCCHHHHHHHHHHHHHTTCE--ECSSGGGCSEEECSSCCCCHHHHHHTTTCSEEECHHH
T ss_pred CeEEEEeCCChHHHHHHHHHHHHCCCE--EeCCCCCceEEEECCCCCCHHHHHHHHcCCCEecHHH
Confidence 456777788887777888888888753 111111111111 23459999999998654
No 98
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=31.92 E-value=70 Score=17.87 Aligned_cols=45 Identities=22% Similarity=0.428 Sum_probs=30.4
Q ss_pred hhcCCCEEe-ccCCC---cccceeeCceEEEecC-CHHHHHHHHHHHhcC
Q 043097 49 MAAYKPVIA-CDSGG---PVETIKNEVVGFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 49 ma~G~pvi~-s~~~~---~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
....+|+|+ |.... ..+.+..+..+++..+ +.+++...+..++..
T Consensus 74 ~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~~ 123 (143)
T 3jte_A 74 ITPHMAVIILTGHGDLDNAILAMKEGAFEYLRKPVTAQDLSIAINNAINR 123 (143)
T ss_dssp HCTTCEEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred hCCCCeEEEEECCCCHHHHHHHHHhCcceeEeCCCCHHHHHHHHHHHHHH
Confidence 345677765 33332 2234455677899888 999999999888753
No 99
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=31.56 E-value=26 Score=19.24 Aligned_cols=42 Identities=17% Similarity=0.372 Sum_probs=27.9
Q ss_pred cCCCEEe-ccCCC---cccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 51 AYKPVIA-CDSGG---PVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 51 ~G~pvi~-s~~~~---~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
.++|+|. |.... ..+.+..+..+++..+ +++++...+..++.
T Consensus 75 ~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~~ 121 (127)
T 2jba_A 75 RDIPVVMLTARGEEEDRVRGLETGADDCITKPFSPKELVARIKAVMR 121 (127)
T ss_dssp TTSCEEEEEETTHHHHHHTTCCCSCSEEEEESCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHhcCCCeEEeCCCCHHHHHHHHHHHHh
Confidence 4678765 33321 2334556667888888 89999998877653
No 100
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=31.10 E-value=7.8 Score=24.23 Aligned_cols=48 Identities=10% Similarity=0.012 Sum_probs=28.4
Q ss_pred chhhhhcCCCEEeccCCCc-ccceeeC-ceEEEecCCHHHHHHHHHHHhc
Q 043097 45 PHSSMAAYKPVIACDSGGP-VETIKNE-VVGFLCNPTPQEFSLSMAKLIQ 92 (134)
Q Consensus 45 ~~eAma~G~pvi~s~~~~~-~e~i~~~-~~g~~~~~~~~~l~~~i~~~~~ 92 (134)
..||+..++||++-+..+. ..++.+. ...+.+..|++++.+.+.+++.
T Consensus 124 ~~~al~~~kpV~~l~~~~~~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 124 VALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLA 173 (176)
T ss_dssp HHHHHHTTCCEEEESCCHHHHHHHHHHCTTTEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEEEcCcccccccCChhhcCeEEEcCCHHHHHHHHHHHHH
Confidence 4458899999998765321 1122221 1223333388888888877653
No 101
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=31.03 E-value=67 Score=17.41 Aligned_cols=42 Identities=12% Similarity=0.211 Sum_probs=27.7
Q ss_pred cCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 51 AYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 51 ~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
.+.|+|. |..... .+.+..+..+++..+ +++++...+..++.
T Consensus 72 ~~~~ii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~l~ 118 (120)
T 3f6p_A 72 YDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLR 118 (120)
T ss_dssp CCSCEEEEEESSCHHHHHHHHHTTCCEEEEESCCHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCChHHHHHHHhCCcceeEcCCCCHHHHHHHHHHHHh
Confidence 3678765 333222 123455677889888 99999998887654
No 102
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=31.03 E-value=92 Score=18.97 Aligned_cols=11 Identities=27% Similarity=0.214 Sum_probs=10.0
Q ss_pred hhhcCCCEEec
Q 043097 48 SMAAYKPVIAC 58 (134)
Q Consensus 48 Ama~G~pvi~s 58 (134)
|.+.|+|||+-
T Consensus 94 A~AlgKPVi~l 104 (161)
T 2f62_A 94 AAALNKMVLTF 104 (161)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHCCCEEEEE
Confidence 99999999984
No 103
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=30.75 E-value=92 Score=18.87 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=30.5
Q ss_pred hcCCCEEe-ccCC---CcccceeeCceEEEecC-CHHHHHHHHHHHhcC
Q 043097 50 AAYKPVIA-CDSG---GPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 50 a~G~pvi~-s~~~---~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
..++|+|. |... .....+..+..+++..+ +++++...+..++..
T Consensus 74 ~~~~~ii~ls~~~~~~~~~~a~~~Ga~~~l~Kp~~~~~L~~~i~~~~~~ 122 (208)
T 1yio_A 74 SDGIPIVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQALLDAIEQGLQL 122 (208)
T ss_dssp TCCCCEEEEESCTTSCCCHHHHHTTEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHhh
Confidence 45788876 3332 22334456777899988 999999999888753
No 104
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=30.67 E-value=74 Score=17.76 Aligned_cols=41 Identities=12% Similarity=0.149 Sum_probs=26.3
Q ss_pred CCCEEe-ccCCCcccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 52 YKPVIA-CDSGGPVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 52 G~pvi~-s~~~~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..|+|. +...........+..+++..+ +++++...+..++.
T Consensus 87 ~~~ii~~s~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~~~ 129 (140)
T 3c97_A 87 RASIIAITADTIDDDRPGAELDEYVSKPLNPNQLRDVVLTCHS 129 (140)
T ss_dssp CCCCEEEESSCCSCCCCCSSCSEEEESSCCHHHHHHHHHHHHC
T ss_pred ceEEEEEeCccchhHHHhCChhheEeCCCCHHHHHHHHHHHhC
Confidence 456655 333222222344556788888 99999999988764
No 105
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=30.21 E-value=15 Score=17.14 Aligned_cols=13 Identities=15% Similarity=0.059 Sum_probs=9.2
Q ss_pred hhhcCCCEEeccC
Q 043097 48 SMAAYKPVIACDS 60 (134)
Q Consensus 48 Ama~G~pvi~s~~ 60 (134)
--+||+|+..+.+
T Consensus 20 C~~CgkPi~lsAI 32 (44)
T 2lo3_A 20 CEKCGKPLALTAI 32 (44)
T ss_dssp CTTTCCEEETTTH
T ss_pred hcccCCcchHHHH
Confidence 3578999977643
No 106
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=30.17 E-value=77 Score=17.80 Aligned_cols=43 Identities=9% Similarity=0.171 Sum_probs=28.3
Q ss_pred hcCCCEEe-ccCCC---cccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 50 AAYKPVIA-CDSGG---PVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 50 a~G~pvi~-s~~~~---~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
...+|+|. |.... ..+.+..+..+++..+ +++++...+..++.
T Consensus 93 ~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 93 HPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDALKRAAA 140 (146)
T ss_dssp CTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHHHHHHh
Confidence 34667765 33322 1223455667888888 99999999988764
No 107
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=29.71 E-value=51 Score=20.55 Aligned_cols=44 Identities=11% Similarity=0.049 Sum_probs=30.5
Q ss_pred hhcCCCEEe-ccCCC---cccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 49 MAAYKPVIA-CDSGG---PVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 49 ma~G~pvi~-s~~~~---~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
....+|+|. |.... ....+..+..|++..+ +++++...+..++.
T Consensus 80 ~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~i~~~~~ 128 (225)
T 3klo_A 80 SCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQ 128 (225)
T ss_dssp HCTTCEEEEEEECTTCCHHHHTTSTTEEEEEETTCCHHHHHHHHHHHHT
T ss_pred hCCCCcEEEEECCcchhHHHHHHHhCCCEEEecCCCHHHHHHHHHHHHC
Confidence 345788765 33322 2223455677899998 99999999999876
No 108
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=29.56 E-value=26 Score=21.95 Aligned_cols=57 Identities=19% Similarity=0.046 Sum_probs=34.1
Q ss_pred ceEeecCccchhhHHHHHHHHHHcCCCCeEEeccccccc------------cCCchhhhhcCCCEEecc
Q 043097 3 DVILVNSKFTATTFANTFKKLHARGIHPVVLYPAVNVYQ------------FDKPHSSMAAYKPVIACD 59 (134)
Q Consensus 3 ~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~------------~~~~~eAma~G~pvi~s~ 59 (134)
+++++-+++.......+.+.+..+|-.-.--+...-.+. -.....|++.|+|||..+
T Consensus 4 ~~~~~~sg~~~~~~~~l~~~~~~~G~~~~~~~~~~~THli~~~~~~~~~~rt~k~~~a~~~g~~IV~~~ 72 (214)
T 1t15_A 4 RMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYF 72 (214)
T ss_dssp CCEEEEESCCHHHHHHHHHHHHHHTCEECSSCCTTCCEEEECBCTTSEECCBHHHHHHHHTTCEEEETH
T ss_pred cEEEEECCCCHHHHHHHHHHHHHhCCEEeCccCCCCcEEEEeCCcccchhhhHHHHHHHhcCCEEeCHH
Confidence 578888888887777888888887642110011110000 112234889999998864
No 109
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=29.46 E-value=65 Score=22.92 Aligned_cols=66 Identities=14% Similarity=0.136 Sum_probs=42.2
Q ss_pred CCCCeEEecccc------ccccCCchhhhhcCCCEEeccCCCccc------ceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 27 GIHPVVLYPAVN------VYQFDKPHSSMAAYKPVIACDSGGPVE------TIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 27 ~~~~~v~~~g~~------~~~~~~~~eAma~G~pvi~s~~~~~~e------~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..+|+.+.|+.. .+.-....+.+....|+|..+-.+..+ +-+.+..|++... +++++++.+.++-.
T Consensus 11 t~ddvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~Vs~~~lA~Ava~aGGlGvi~~~~~~e~~~~~i~~vk~ 89 (400)
T 3ffs_A 11 TFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVKN 89 (400)
T ss_dssp CGGGEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTTTCSSHHHHHHHTTTCEEEECSSSCHHHHHHHHHHHHC
T ss_pred CceeEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCCcCcHHHHHHHHHCCCEEEeCCCCCHHHHHHHHHHHHh
Confidence 456667777652 111112335778899999986554332 2345677888766 89999998877644
No 110
>2b8i_A PAS factor; four helix bundle, lipid binding protein; 1.80A {Vibrio vulnificus}
Probab=28.57 E-value=70 Score=16.80 Aligned_cols=47 Identities=9% Similarity=0.072 Sum_probs=32.5
Q ss_pred HHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhc
Q 043097 82 EFSLSMAKLIQ-EPQMAKKMGENARHHVMESFSTKIFGQHLNRLLAYVAR 130 (134)
Q Consensus 82 ~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 130 (134)
-+++.+..+.+ +|++-.+++++.++.. ...+++...-|..++.-+..
T Consensus 8 liydtL~~La~~~PeqhA~iRQ~LYeqL--~LpF~KqlaLYs~vLGPaSs 55 (77)
T 2b8i_A 8 LIYETLVNLANQDPEQHATIRQNLYEQL--DLPFDKQLALYAGALGPASS 55 (77)
T ss_dssp HHHHHHHHHHHSCGGGHHHHHHHHHHHH--CCCHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHc--CCcHHHHHHHHHHccCcccc
Confidence 35666777766 7888888888888766 57777766666666554433
No 111
>2fcg_F Cationic, antibacterial protein FALL-39, core peptide; HOST defense peptide, antimicrobial peptide, antimicrobial protein; NMR {Synthetic}
Probab=27.93 E-value=40 Score=13.84 Aligned_cols=18 Identities=17% Similarity=0.130 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 043097 114 TKIFGQHLNRLLAYVARG 131 (134)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~ 131 (134)
.+++.+++.++|.++..+
T Consensus 5 ~kkIgQkIkdFf~~l~pr 22 (26)
T 2fcg_F 5 FKRIVQRIKDFLRNLVPR 22 (26)
T ss_dssp HHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHhcCcc
Confidence 456666777777766543
No 112
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=27.83 E-value=21 Score=20.04 Aligned_cols=42 Identities=19% Similarity=0.180 Sum_probs=27.7
Q ss_pred cCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 51 AYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 51 ~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..+|+|. |..... .+.+..+..+++..+ +++++...+..++.
T Consensus 86 ~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~~~ 132 (135)
T 3snk_A 86 ATVPLIAVSDELTSEQTRVLVRMNASDWLHKPLDGKELLNAVTFHDT 132 (135)
T ss_dssp TTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHTC-
T ss_pred CCCcEEEEeCCCCHHHHHHHHHcCcHhhccCCCCHHHHHHHHHHHhc
Confidence 3678866 333322 223445667888888 99999999988764
No 113
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=27.46 E-value=24 Score=20.48 Aligned_cols=42 Identities=19% Similarity=0.321 Sum_probs=28.6
Q ss_pred cCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 51 AYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 51 ~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..+|+|+ |..... .+.+..+..+++..+ +++++...+..++.
T Consensus 80 ~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~ 126 (154)
T 3gt7_A 80 RTIPVILLTILSDPRDVVRSLECGADDFITKPCKDVVLASHVKRLLS 126 (154)
T ss_dssp TTSCEEEEECCCSHHHHHHHHHHCCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 4678876 333222 223445667889888 99999999988875
No 114
>1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A*
Probab=26.92 E-value=35 Score=18.49 Aligned_cols=42 Identities=19% Similarity=0.268 Sum_probs=26.6
Q ss_pred hcCCCEEe-ccCC---CcccceeeCceEEEecC-CHHHHHHHHHHHh
Q 043097 50 AAYKPVIA-CDSG---GPVETIKNEVVGFLCNP-TPQEFSLSMAKLI 91 (134)
Q Consensus 50 a~G~pvi~-s~~~---~~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~ 91 (134)
..++|+|. |... .....+..+..+++..+ +++++...+..++
T Consensus 73 ~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~ 119 (124)
T 1dc7_A 73 HPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAI 119 (124)
T ss_dssp CTTSCCCCBCCSTTSTTTTSSCTTCCCCCBCSSCCHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHhcCcceEeeCCCCHHHHHHHHHHHH
Confidence 34677765 3322 22334445666788888 8999998887764
No 115
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=26.46 E-value=1.4e+02 Score=19.59 Aligned_cols=15 Identities=27% Similarity=0.009 Sum_probs=11.6
Q ss_pred hhhhcCCCEEeccCC
Q 043097 47 SSMAAYKPVIACDSG 61 (134)
Q Consensus 47 eAma~G~pvi~s~~~ 61 (134)
++...|.|+|..+..
T Consensus 79 ~~~~~giPvV~~~~~ 93 (330)
T 3uug_A 79 QAGEQGIKVIAYDRL 93 (330)
T ss_dssp HHHHTTCEEEEESSC
T ss_pred HHHHCCCCEEEECCC
Confidence 366789999997654
No 116
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=26.07 E-value=1.3e+02 Score=19.23 Aligned_cols=14 Identities=36% Similarity=0.237 Sum_probs=10.9
Q ss_pred hhhcCCCEEeccCC
Q 043097 48 SMAAYKPVIACDSG 61 (134)
Q Consensus 48 Ama~G~pvi~s~~~ 61 (134)
+...|.|+|.-+..
T Consensus 85 ~~~~~iPvV~~~~~ 98 (293)
T 3l6u_A 85 AKKAGIPVFAIDRM 98 (293)
T ss_dssp HHHTTCCEEEESSC
T ss_pred HHHcCCCEEEecCC
Confidence 55779999997654
No 117
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=26.05 E-value=79 Score=17.39 Aligned_cols=43 Identities=12% Similarity=0.320 Sum_probs=28.8
Q ss_pred cCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHhcC
Q 043097 51 AYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 51 ~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
..+|+|. |..... ...+..+..+++..+ +++++...+..++..
T Consensus 74 ~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 121 (136)
T 1mvo_A 74 LMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILRR 121 (136)
T ss_dssp CCCCEEEEECTTCCCCHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCHHHHHHHHhCCCCEEEECCCCHHHHHHHHHHHHHh
Confidence 4677765 333322 223445667889888 999999999887653
No 118
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=25.73 E-value=1e+02 Score=17.87 Aligned_cols=28 Identities=21% Similarity=0.468 Sum_probs=19.6
Q ss_pred cceeeCceEEEecC-C---------HHHHHHHHHHHhc
Q 043097 65 ETIKNEVVGFLCNP-T---------PQEFSLSMAKLIQ 92 (134)
Q Consensus 65 e~i~~~~~g~~~~~-~---------~~~l~~~i~~~~~ 92 (134)
+.+..+..+++..+ + .+.+.+.+...+.
T Consensus 117 ~~~~~ga~~~l~KP~~~~~l~~r~~~~~l~~~i~~~~~ 154 (164)
T 3t8y_A 117 EALRNGAVDFITKPHGSISLTFRQVAPELLEKIRQAMN 154 (164)
T ss_dssp HHHHTTCCEEEECSSSSSCGGGGGGHHHHHHHHHHHTT
T ss_pred HHHHcCcCEEEeCCCCHHHHHHHhhhHHHHHHHHHHhC
Confidence 34555677888887 6 5777777777765
No 119
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=25.40 E-value=60 Score=17.69 Aligned_cols=44 Identities=7% Similarity=-0.034 Sum_probs=27.7
Q ss_pred hcCCCEEec-cCCCc--ccceeeCceEEEecC-CHHHHHHHHHHHhcC
Q 043097 50 AAYKPVIAC-DSGGP--VETIKNEVVGFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 50 a~G~pvi~s-~~~~~--~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
...+|+|+- ..... ...+..+..+++..+ +++++.+.+......
T Consensus 75 ~~~~~ii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~~~~ 122 (127)
T 3i42_A 75 EKTSKFVAVSGFAKNDLGKEACELFDFYLEKPIDIASLEPILQSIEGH 122 (127)
T ss_dssp SSCCEEEEEECC-CTTCCHHHHHHCSEEEESSCCHHHHHHHHHHHC--
T ss_pred cCCCCEEEEECCcchhHHHHHHHhhHHheeCCCCHHHHHHHHHHhhcc
Confidence 456787763 22211 233445566788888 999999999887653
No 120
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=25.39 E-value=16 Score=20.83 Aligned_cols=43 Identities=19% Similarity=0.403 Sum_probs=29.3
Q ss_pred hcCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 50 AAYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 50 a~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
...+|+|+ |..... .+.+..+..+++..+ +.+++...+..++.
T Consensus 80 ~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~~~~~ 127 (147)
T 2zay_A 80 TASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSARIKRVLK 127 (147)
T ss_dssp TTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 45788876 333322 223445667889888 99999999988875
No 121
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=25.20 E-value=2e+02 Score=21.02 Aligned_cols=88 Identities=14% Similarity=0.025 Sum_probs=49.3
Q ss_pred cceEeecCc-----cchhhHHHHHHHHHHcCCCCeEEeccc--cccccCCchh-hhhcCCCEEeccCCCcccceeeCceE
Q 043097 2 ADVILVNSK-----FTATTFANTFKKLHARGIHPVVLYPAV--NVYQFDKPHS-SMAAYKPVIACDSGGPVETIKNEVVG 73 (134)
Q Consensus 2 a~~v~~~s~-----~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~e-Ama~G~pvi~s~~~~~~e~i~~~~~g 73 (134)
+++|-++.. +..-.+.++.+...+-.....+++.+- .....-...+ |-..++|||+-..|....-+.. .|
T Consensus 140 S~~Vs~Gn~~l~~~i~dv~~~D~l~~l~~Dp~T~~I~ly~E~~~e~~~~~f~~~ar~~~KPVV~~k~Grs~~g~r~--~G 217 (480)
T 3dmy_A 140 THAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARD--EN 217 (480)
T ss_dssp EEEEECCTTTTSTTTTTHHHHHHHHHHHTCTTCCEEEEEESCCCHHHHHHHHHHHHHHCSCEEEEETTCCCSSSEE--TT
T ss_pred eEEEEcCCCccccccCCCCHHHHHHHHhcCCCCCEEEEEEecCCcHHHHHHHHHHHhCCCCEEEEEeCCCCccccc--CC
Confidence 445666655 355566777777776655566655542 1110011112 2258999999876654443433 35
Q ss_pred EEecCCHHHHHHHHHHHh
Q 043097 74 FLCNPTPQEFSLSMAKLI 91 (134)
Q Consensus 74 ~~~~~~~~~l~~~i~~~~ 91 (134)
++.-.+.+++.+...-+.
T Consensus 218 virv~~~~el~~~a~~l~ 235 (480)
T 3dmy_A 218 VWFASSLDEAARLACLLS 235 (480)
T ss_dssp EEEESSHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHh
Confidence 554447888877665543
No 122
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=25.16 E-value=64 Score=20.28 Aligned_cols=41 Identities=12% Similarity=0.289 Sum_probs=28.7
Q ss_pred CCCEEe-ccCCC---cccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 52 YKPVIA-CDSGG---PVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 52 G~pvi~-s~~~~---~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
++|+|. |.... ....+..+..+++..+ +++++...+..++.
T Consensus 76 ~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~i~~~~~ 121 (238)
T 2gwr_A 76 GVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLR 121 (238)
T ss_dssp CCCEEEEEETTCCSCHHHHHHTTCCEEEEESCCHHHHHHHHHHHCC
T ss_pred CCcEEEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHh
Confidence 788876 33322 2334455777899888 99999999998765
No 123
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=24.74 E-value=31 Score=19.80 Aligned_cols=43 Identities=12% Similarity=0.197 Sum_probs=27.7
Q ss_pred hhcCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHh
Q 043097 49 MAAYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLI 91 (134)
Q Consensus 49 ma~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~ 91 (134)
...++|+|+ |..... .+.+..+..+++..+ +++++.+.+.++.
T Consensus 86 ~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~ 133 (152)
T 3heb_A 86 HTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQLG 133 (152)
T ss_dssp TTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred cccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHH
Confidence 345677766 333321 223445667888888 8999988887763
No 124
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=24.69 E-value=1.4e+02 Score=19.15 Aligned_cols=31 Identities=16% Similarity=0.247 Sum_probs=16.5
Q ss_pred CeEEeccccccccCC-chhhhhcCCCEEeccCC
Q 043097 30 PVVLYPAVNVYQFDK-PHSSMAAYKPVIACDSG 61 (134)
Q Consensus 30 ~~v~~~g~~~~~~~~-~~eAma~G~pvi~s~~~ 61 (134)
+-+++.+.+.+.... ..++. .|.|+|+-+..
T Consensus 65 dgiii~~~~~~~~~~~~~~~~-~~iPvV~~~~~ 96 (304)
T 3o1i_D 65 NAIILGTVDPHAYEHNLKSWV-GNTPVFATVNQ 96 (304)
T ss_dssp SEEEECCSSTTSSTTTHHHHT-TTSCEEECSSC
T ss_pred CEEEEeCCChhHHHHHHHHHc-CCCCEEEecCC
Confidence 334444443333222 33355 89999997554
No 125
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=24.64 E-value=59 Score=18.12 Aligned_cols=44 Identities=14% Similarity=0.162 Sum_probs=29.6
Q ss_pred hhcCCCEEec-cCCCc---c-cceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 49 MAAYKPVIAC-DSGGP---V-ETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 49 ma~G~pvi~s-~~~~~---~-e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
....+|+|.- ..... . +.+..+..+++..+ +.+++...+..++.
T Consensus 77 ~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~l~ 126 (140)
T 3grc_A 77 RTRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPIDENLLILSLHRAID 126 (140)
T ss_dssp GGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 4457888763 32211 1 33445667888888 99999999988875
No 126
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=24.58 E-value=1.4e+02 Score=19.39 Aligned_cols=15 Identities=13% Similarity=0.109 Sum_probs=10.9
Q ss_pred hhhhhcCCCEEeccC
Q 043097 46 HSSMAAYKPVIACDS 60 (134)
Q Consensus 46 ~eAma~G~pvi~s~~ 60 (134)
.++...|.|+|.-+.
T Consensus 86 ~~~~~~~iPvV~~~~ 100 (301)
T 3miz_A 86 PESGDVSIPTVMINC 100 (301)
T ss_dssp CCCTTCCCCEEEEEE
T ss_pred HHHHhCCCCEEEECC
Confidence 346678999988654
No 127
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=24.46 E-value=99 Score=17.15 Aligned_cols=46 Identities=20% Similarity=0.305 Sum_probs=30.4
Q ss_pred hhcCCCEEec-cCCC---cccceeeCceEEEecC-CHHHHHHHHHHHhcCH
Q 043097 49 MAAYKPVIAC-DSGG---PVETIKNEVVGFLCNP-TPQEFSLSMAKLIQEP 94 (134)
Q Consensus 49 ma~G~pvi~s-~~~~---~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~~ 94 (134)
....+|+|.- .... ..+.+..+..+++..+ +++++.+.+..++...
T Consensus 78 ~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~~ 128 (140)
T 3lua_A 78 RTANTPVIIATKSDNPGYRHAALKFKVSDYILKPYPTKRLENSVRSVLKIC 128 (140)
T ss_dssp GGTTCCEEEEESCCCHHHHHHHHHSCCSEEEESSCCTTHHHHHHHHHHCC-
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhc
Confidence 4456777653 3222 1223445667888888 8999999999988754
No 128
>3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens}
Probab=24.35 E-value=67 Score=18.27 Aligned_cols=27 Identities=22% Similarity=0.220 Sum_probs=21.8
Q ss_pred CcceEeecCccchhhHHHHHHHHHHcC
Q 043097 1 MADVILVNSKFTATTFANTFKKLHARG 27 (134)
Q Consensus 1 ~a~~v~~~s~~~~~~~~~~~~~~~~~~ 27 (134)
+..++|.-++|+.....++.+.+..+|
T Consensus 22 F~g~~Ic~sGf~~~er~~l~~~i~~~G 48 (112)
T 3l46_A 22 FQDCILSFLGFSDEEKTNMEEMTEMQG 48 (112)
T ss_dssp TTTCEECEESCCHHHHHHHHHHHHHTT
T ss_pred cCCeEEEEeCCCHHHHHHHHHHHHHcC
Confidence 456777788899888888999998875
No 129
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=24.34 E-value=95 Score=16.92 Aligned_cols=26 Identities=12% Similarity=0.241 Sum_probs=20.6
Q ss_pred eCceEEEecC-CHHHHHHHHHHHhcCH
Q 043097 69 NEVVGFLCNP-TPQEFSLSMAKLIQEP 94 (134)
Q Consensus 69 ~~~~g~~~~~-~~~~l~~~i~~~~~~~ 94 (134)
.+..+++..+ +.+++.+.+.++....
T Consensus 100 ~g~~~~l~KP~~~~~l~~~l~~~~~~~ 126 (135)
T 3eqz_A 100 LNVINTFTKPINTEVLTCFLTSLSNRQ 126 (135)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHHSCCC
T ss_pred CCcceeeCCCCCHHHHHHHHHHHHhhc
Confidence 3445788888 9999999999988743
No 130
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=24.18 E-value=90 Score=16.96 Aligned_cols=42 Identities=21% Similarity=0.373 Sum_probs=28.1
Q ss_pred cCCCEEe-ccCCCcc---cceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 51 AYKPVIA-CDSGGPV---ETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 51 ~G~pvi~-s~~~~~~---e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..+|+|. |..+... ..+..|..+++..+ +++++...+++++.
T Consensus 75 ~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCchHHHHHHHhcChhhhccCCCCHHHHHHHHHHHhc
Confidence 4678765 4333222 23345667899988 99999999988763
No 131
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=24.13 E-value=1.1e+02 Score=17.36 Aligned_cols=44 Identities=7% Similarity=0.101 Sum_probs=30.0
Q ss_pred hcCCCEEe-ccCCC---cccceeeCceEEEecC-CHHHHHHHHHHHhcC
Q 043097 50 AAYKPVIA-CDSGG---PVETIKNEVVGFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 50 a~G~pvi~-s~~~~---~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
...+|+|+ |.... ..+.+..+..+++..+ +.+++.+.+..++..
T Consensus 92 ~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 92 KLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEG 140 (150)
T ss_dssp TCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHHHHHTT
T ss_pred CCCCeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHHcC
Confidence 45677765 33322 2234455677899988 999999999988763
No 132
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=23.93 E-value=31 Score=19.32 Aligned_cols=42 Identities=19% Similarity=0.313 Sum_probs=28.3
Q ss_pred cCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 51 AYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 51 ~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..+|+|+ |..... ...+..+..+++..+ +.+++...+..++.
T Consensus 81 ~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 127 (140)
T 3cg0_A 81 CNLPIIFITSSQDVETFQRAKRVNPFGYLAKPVAADTLHRSIEMAIH 127 (140)
T ss_dssp SCCCEEEEECCCCHHHHHHHHTTCCSEEEEESCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHhcCCCEEEeCCCCHHHHHHHHHHHHh
Confidence 5788876 333322 223445667888888 89999999988764
No 133
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=23.29 E-value=90 Score=17.29 Aligned_cols=42 Identities=17% Similarity=0.314 Sum_probs=28.2
Q ss_pred cCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 51 AYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 51 ~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..+|+|. |..... .+.+..+..+++..+ +++++...+.++..
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~~ 125 (136)
T 3kto_A 79 FHLPTIVMASSSDIPTAVRAMRASAADFIEKPFIEHVLVHDVQQIIN 125 (136)
T ss_dssp CCCCEEEEESSCCHHHHHHHHHTTCSEEEESSBCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHcChHHheeCCCCHHHHHHHHHHHHh
Confidence 4677765 333322 233455667888888 89999999988765
No 134
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=23.23 E-value=1.6e+02 Score=19.12 Aligned_cols=14 Identities=7% Similarity=-0.028 Sum_probs=10.8
Q ss_pred hhhcCCCEEeccCC
Q 043097 48 SMAAYKPVIACDSG 61 (134)
Q Consensus 48 Ama~G~pvi~s~~~ 61 (134)
....|.|+|.-+..
T Consensus 102 l~~~~iPvV~i~~~ 115 (305)
T 3huu_A 102 LNEFKVPYLIVGKS 115 (305)
T ss_dssp HHHTTCCEEEESCC
T ss_pred HHHcCCCEEEECCC
Confidence 55789999987664
No 135
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=22.99 E-value=1.6e+02 Score=19.14 Aligned_cols=14 Identities=21% Similarity=0.047 Sum_probs=10.9
Q ss_pred hhhcCCCEEeccCC
Q 043097 48 SMAAYKPVIACDSG 61 (134)
Q Consensus 48 Ama~G~pvi~s~~~ 61 (134)
+...|.|+|.-+..
T Consensus 79 ~~~~~iPvV~~~~~ 92 (313)
T 3m9w_A 79 AKQEGIKVLAYDRM 92 (313)
T ss_dssp HHTTTCEEEEESSC
T ss_pred HHHCCCeEEEECCc
Confidence 66789999987654
No 136
>1x2l_A CUT-like 2, homeobox protein CUX-2; CUT domain, human homeobox protein CUX-2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.35.1.7
Probab=22.70 E-value=6.7 Score=22.22 Aligned_cols=28 Identities=7% Similarity=0.038 Sum_probs=16.3
Q ss_pred hcCHHHHHHHHHHHHHHHHHhcCHHHHH
Q 043097 91 IQEPQMAKKMGENARHHVMESFSTKIFG 118 (134)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 118 (134)
+.+|.-+..+.+.+++...+.|+|=..-
T Consensus 56 L~~PkpW~~L~~~Gre~yiRM~nWL~~~ 83 (101)
T 1x2l_A 56 LARPKPWRKLTVKGKEPFIKMKQFLSDE 83 (101)
T ss_dssp HHCCCCGGGCCHHHHHHHHHHHHHHTCT
T ss_pred hcCCCCHHHHhHhhhHHHHHHHHHccCH
Confidence 3344444444456777776777776654
No 137
>1urq_A M-tomosyn isoform; transport protein, tomosyn-snare complex, exocytosis, four helical bundle, coiled coil; 2.0A {Rattus norvegicus} SCOP: h.1.15.1
Probab=22.61 E-value=87 Score=15.84 Aligned_cols=44 Identities=11% Similarity=0.001 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043097 81 QEFSLSMAKLIQEPQMAKKMGENARHHVMESFSTKIFGQHLNRL 124 (134)
Q Consensus 81 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 124 (134)
..+.+.+..+++.-+.+..+..+.-+......+....+.++..-
T Consensus 18 ~iM~~ni~kvlERGekL~~L~dkT~~L~~~A~~F~~~A~~l~~K 61 (63)
T 1urq_A 18 GELARARLALDERGQKLSDLEERTAAMMSSADSFSKHAHEMMLK 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555666666655555555555555444445555555555443
No 138
>1wh8_A CUT-like 2, homeobox protein CUX-2; CUT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, transcription; NMR {Homo sapiens} SCOP: a.35.1.7
Probab=22.35 E-value=7.2 Score=22.50 Aligned_cols=14 Identities=0% Similarity=0.140 Sum_probs=10.4
Q ss_pred CHHHHHHHHHHHhc
Q 043097 79 TPQEFSLSMAKLIQ 92 (134)
Q Consensus 79 ~~~~l~~~i~~~~~ 92 (134)
|..+++..|...+.
T Consensus 28 DTk~I~~~ikewL~ 41 (111)
T 1wh8_A 28 DTYSITKRVKEVLT 41 (111)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 77788877777665
No 139
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=22.09 E-value=50 Score=22.44 Aligned_cols=31 Identities=13% Similarity=0.179 Sum_probs=21.1
Q ss_pred CHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHH
Q 043097 79 TPQEFSLSMAKLIQ--EPQMAKKMGENARHHVM 109 (134)
Q Consensus 79 ~~~~l~~~i~~~~~--~~~~~~~~~~~~~~~~~ 109 (134)
+...+++.|...+. ||.....+.+|+.++..
T Consensus 140 n~~~~a~~I~~~L~~~DP~~a~~Y~~N~~~~~~ 172 (312)
T 2o1e_A 140 LAQKEVKNITAQIVKQDPDNKEYYEKNSKEYIA 172 (312)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH
Confidence 45566666666555 88888888788776654
No 140
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=22.00 E-value=2.3e+02 Score=20.40 Aligned_cols=28 Identities=11% Similarity=0.300 Sum_probs=22.8
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043097 79 TPQEFSLSMAKLIQEPQMAKKMGENARHH 107 (134)
Q Consensus 79 ~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 107 (134)
++.+.+++|.. +.+|+.|+.+.+.++++
T Consensus 405 ~~~Era~~li~-iAhpdfr~~L~~~a~~~ 432 (434)
T 3eh7_A 405 SLRQRAEALIA-IAHPDFREELTKHLRKR 432 (434)
T ss_dssp CHHHHHHHHHT-TSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhc-CCCCCcHHHHHHHHHHh
Confidence 78888888887 78999999987776653
No 141
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=21.88 E-value=62 Score=18.10 Aligned_cols=41 Identities=7% Similarity=0.166 Sum_probs=27.6
Q ss_pred CCCEEe-ccCCC---cccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 52 YKPVIA-CDSGG---PVETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 52 G~pvi~-s~~~~---~~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
.+|+|. |.... ..+.+..+..+++..+ +++++...+..++.
T Consensus 75 ~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~~ 120 (136)
T 2qzj_A 75 TCPIVYMTYINEDQSILNALNSGGDDYLIKPLNLEILYAKVKAILR 120 (136)
T ss_dssp CCCEEEEESCCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHH
Confidence 677765 33332 2233455677899988 99999999987764
No 142
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=21.69 E-value=44 Score=21.72 Aligned_cols=55 Identities=18% Similarity=0.038 Sum_probs=33.6
Q ss_pred eEeecCccchhhHHHHHHHHHHcCCCCeEEe-ccc--cccccC--------CchhhhhcCCCEEeccC
Q 043097 4 VILVNSKFTATTFANTFKKLHARGIHPVVLY-PAV--NVYQFD--------KPHSSMAAYKPVIACDS 60 (134)
Q Consensus 4 ~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~-~g~--~~~~~~--------~~~eAma~G~pvi~s~~ 60 (134)
.+++-|++.......+.+.+..+|-. +.- ..+ .....+ ..+.|++.|++||..++
T Consensus 10 ~~~~~Sg~~~~~~~~l~~~i~~LGg~--~~~~~~~~~~~THlV~~~~~RT~K~l~aia~G~wIvs~~w 75 (235)
T 3al2_A 10 YIFQLSSLNPQERIDYCHLIEKLGGL--VIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGKWVLHRSY 75 (235)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHTTCE--ECCSSSCCTTCCEEEESSCCCSHHHHHHHHTTCEEECTHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHHcCCE--EeccCCCCCCCcEEEECCCCCCHHHHHHHHcCCcCccHHH
Confidence 45566777776667788888887643 211 011 111111 23449999999999765
No 143
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=21.54 E-value=1.4e+02 Score=19.24 Aligned_cols=31 Identities=13% Similarity=-0.123 Sum_probs=17.5
Q ss_pred CeEEeccccccccC-CchhhhhcCCCEEeccC
Q 043097 30 PVVLYPAVNVYQFD-KPHSSMAAYKPVIACDS 60 (134)
Q Consensus 30 ~~v~~~g~~~~~~~-~~~eAma~G~pvi~s~~ 60 (134)
+-+++.+.+.+... ...++...|.|+|..+.
T Consensus 59 dgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~ 90 (306)
T 8abp_A 59 KGFVICTPDPKLGSAIVAKARGYDMKVIAVDD 90 (306)
T ss_dssp CEEEEECSCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred CEEEEeCCCchhhHHHHHHHHHCCCcEEEeCC
Confidence 44444444333222 23347778999999774
No 144
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=21.51 E-value=1.1e+02 Score=16.68 Aligned_cols=42 Identities=24% Similarity=0.495 Sum_probs=28.9
Q ss_pred cCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 51 AYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 51 ~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
..+|+|. |..... .+.+..+..+++..+ +++++.+.++.++.
T Consensus 80 ~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~l~ 126 (129)
T 3h1g_A 80 KEIPIIMITAEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLG 126 (129)
T ss_dssp TTCCEEEEESCCSHHHHHHHHHHTCCEEEESCCCHHHHHHHHHHHHC
T ss_pred CCCeEEEEeCCCChHHHHHHHHcCccEEEeCCCCHHHHHHHHHHHhc
Confidence 3578766 333322 233455677899998 99999999988775
No 145
>1wh6_A CUT-like 2, homeobox protein CUX-2; CUT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, transcription; NMR {Homo sapiens} SCOP: a.35.1.7
Probab=21.42 E-value=6.4 Score=22.30 Aligned_cols=14 Identities=7% Similarity=0.157 Sum_probs=10.0
Q ss_pred CHHHHHHHHHHHhc
Q 043097 79 TPQEFSLSMAKLIQ 92 (134)
Q Consensus 79 ~~~~l~~~i~~~~~ 92 (134)
|..+++..|.+.+.
T Consensus 18 DTk~I~~~ike~L~ 31 (101)
T 1wh6_A 18 DTLELTRQVKEKLA 31 (101)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 67777777777665
No 146
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=20.99 E-value=1.8e+02 Score=19.12 Aligned_cols=56 Identities=16% Similarity=0.254 Sum_probs=32.2
Q ss_pred cceEeecCcc-chhhHHHHHHHHHHcCCCCeEEeccccccccCCchhhhhc-CCCEEeccCCC
Q 043097 2 ADVILVNSKF-TATTFANTFKKLHARGIHPVVLYPAVNVYQFDKPHSSMAA-YKPVIACDSGG 62 (134)
Q Consensus 2 a~~v~~~s~~-~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~eAma~-G~pvi~s~~~~ 62 (134)
||.|++.... ......++.+.+.++|+...+-...... ...|..+ |..+|+.+..+
T Consensus 124 AD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~eE-----~~~A~~l~g~~iIGinnr~ 181 (251)
T 1i4n_A 124 ADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSRED-----LEKVFSVIRPKIIGINTRD 181 (251)
T ss_dssp CSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECSHHH-----HHHHHTTCCCSEEEEECBC
T ss_pred CCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCCHHH-----HHHHHhcCCCCEEEEeCcc
Confidence 5666666443 4456667777777666544333222211 2347788 88898876543
No 147
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=20.71 E-value=88 Score=17.03 Aligned_cols=21 Identities=19% Similarity=0.351 Sum_probs=17.2
Q ss_pred EEEecC-CHHHHHHHHHHHhcC
Q 043097 73 GFLCNP-TPQEFSLSMAKLIQE 93 (134)
Q Consensus 73 g~~~~~-~~~~l~~~i~~~~~~ 93 (134)
+++..+ +++++...+.+++..
T Consensus 102 ~~l~kP~~~~~l~~~i~~~~~~ 123 (132)
T 2rdm_A 102 IILEKPFTSAQLITAVSQLLNA 123 (132)
T ss_dssp EEEESSCCHHHHHHHHHHHHHT
T ss_pred ceEeCCCCHHHHHHHHHHHHhc
Confidence 588888 899999999887753
No 148
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=20.37 E-value=75 Score=20.41 Aligned_cols=44 Identities=14% Similarity=0.197 Sum_probs=29.5
Q ss_pred hhcCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 49 MAAYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 49 ma~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
....+|+|+ |..... ...+..+..+++..+ +.+++.+.+..++.
T Consensus 198 ~~~~~piI~lt~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~ 246 (254)
T 2ayx_A 198 LGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAE 246 (254)
T ss_dssp HHCCSCEEEEESSTTSHHHHHHHHCCCEEEEESSCCHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEECCCCHHHHHHHHHcCCceEEECCCCHHHHHHHHHHHHH
Confidence 345788876 333322 223445677899998 99999999987763
No 149
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=20.23 E-value=1.9e+02 Score=18.91 Aligned_cols=23 Identities=30% Similarity=0.447 Sum_probs=18.8
Q ss_pred HHHhcCHHHHHHHHHHHHHHHhc
Q 043097 108 VMESFSTKIFGQHLNRLLAYVAR 130 (134)
Q Consensus 108 ~~~~~s~~~~~~~~~~~~~~~~~ 130 (134)
+.++||.+.+.+++..+++..+.
T Consensus 167 ~lqnFSy~~~~~ki~~fve~~~~ 189 (235)
T 3bu8_A 167 VIQNFSYETFQQKMLRFLESHLD 189 (235)
T ss_dssp HHHTCCHHHHHHHHHHHHHTTSC
T ss_pred HHHhccHHHHHHHHHHHHHHHhc
Confidence 45789999999999988877654
No 150
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=20.06 E-value=1.2e+02 Score=16.40 Aligned_cols=43 Identities=21% Similarity=0.312 Sum_probs=28.9
Q ss_pred hcCCCEEe-ccCCCc---ccceeeCceEEEecC-CHHHHHHHHHHHhc
Q 043097 50 AAYKPVIA-CDSGGP---VETIKNEVVGFLCNP-TPQEFSLSMAKLIQ 92 (134)
Q Consensus 50 a~G~pvi~-s~~~~~---~e~i~~~~~g~~~~~-~~~~l~~~i~~~~~ 92 (134)
...+|+|. |..... .+.+..+..+++..+ +.+++.+.++.++.
T Consensus 73 ~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~~ 120 (126)
T 1dbw_A 73 KINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERASE 120 (126)
T ss_dssp TCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHhCHHHheeCCCCHHHHHHHHHHHHH
Confidence 34678765 333322 223455667899988 99999999988764
No 151
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=20.00 E-value=1.8e+02 Score=18.56 Aligned_cols=14 Identities=36% Similarity=0.468 Sum_probs=10.3
Q ss_pred hhhcCCCEEeccCC
Q 043097 48 SMAAYKPVIACDSG 61 (134)
Q Consensus 48 Ama~G~pvi~s~~~ 61 (134)
+...|.|+|.-+..
T Consensus 79 ~~~~~iPvV~~~~~ 92 (290)
T 2fn9_A 79 AKEAGIPVFCVDRG 92 (290)
T ss_dssp HHHTTCCEEEESSC
T ss_pred HHHCCCeEEEEecC
Confidence 45679999987653
Done!